Citrus Sinensis ID: 001738
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1019 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGP4 | 1010 | Probable LRR receptor-lik | yes | no | 0.959 | 0.968 | 0.454 | 0.0 | |
| C0LGT6 | 1031 | LRR receptor-like serine/ | no | no | 0.955 | 0.944 | 0.447 | 0.0 | |
| Q9SD62 | 1025 | Putative receptor-like pr | no | no | 0.949 | 0.944 | 0.456 | 0.0 | |
| Q9ZUI0 | 980 | Putative leucine-rich rep | no | no | 0.839 | 0.872 | 0.357 | 1e-135 | |
| Q9FL28 | 1173 | LRR receptor-like serine/ | no | no | 0.867 | 0.753 | 0.334 | 1e-125 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.872 | 0.711 | 0.336 | 1e-123 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.917 | 0.823 | 0.311 | 1e-123 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.903 | 0.919 | 0.340 | 1e-122 | |
| Q9LHP4 | 1141 | Receptor-like protein kin | no | no | 0.877 | 0.783 | 0.321 | 1e-120 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.921 | 0.835 | 0.311 | 1e-120 |
| >sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/1011 (45%), Positives = 639/1011 (63%), Gaps = 33/1011 (3%)
Query: 19 LLLHSYAFAGVPSNETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRV 77
+LL ++ F ++ETDR ALL KSQ+ D V SSWN+S LC W GVTCG +++RV
Sbjct: 13 MLLETHGF----TDETDRQALLQFKSQVSEDKRVVLSSWNHSFPLCNWKGVTCGRKNKRV 68
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
T L L +GG++SP +GNLSFL +DL +N F G IP EVG+LSRL+ L + N G
Sbjct: 69 THLELGRLQLGGVISPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLDMGINYLRG 128
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
IP L CS L+N N L G + + +G + L +L++ N++ G+LP S+GNL++
Sbjct: 129 PIPLGLYNCSRLLNLRLDSNRLGGSVPSELG-SLTNLVQLNLYGNNMRGKLPTSLGNLTL 187
Query: 198 LKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLI 257
L+ + + N L G IP+ + QL + L + N FSG PP++YNLSSL+LL + N
Sbjct: 188 LEQLALSHNNLEGEIPSDVAQLTQIWSLQLVANNFSGVFPPALYNLSSLKLLGIGYNHFS 247
Query: 258 GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQ 317
G L D+G+ LP L +F + N F+G IP + SN S L L +N N +G +P F +
Sbjct: 248 GRLRPDLGILLPNLLSFNMGGNYFTGSIPTTLSNISTLERLGMNENNLTGSIP-TFGNVP 306
Query: 318 NLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQI 377
NL L L N+LG+ ++ DL+F+T LTNC++L LG+ NR GG LP SIANLS V +
Sbjct: 307 NLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLPISIANLSAKLVTL 366
Query: 378 NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP 437
++G ISG+IP IGNL+NL +D N L+G +P +GKL NL+ L L N L G IP
Sbjct: 367 DLGGTLISGSIPYDIGNLINLQKLILDQNMLSGPLPTSLGKLLNLRYLSLFSNRLSGGIP 426
Query: 438 FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLY 497
+GN+T+L L+L +N +G +P+SLGNC LL L + NKL G +P +I I L L
Sbjct: 427 AFIGNMTMLETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGTIPLEIMKIQQL-LR 485
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
LD+S N L SLP ++G LQNL L + N++SG++P TL C ++E L L N F G I
Sbjct: 486 LDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGNLFYGDI 545
Query: 558 PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRI 617
P L L VK +DLS+N+LSG IP+Y + S LEYLN+S N+ EGKVP KG+F N T +
Sbjct: 546 P-DLKGLVGVKEVDLSNNDLSGSIPEYFASFSKLEYLNLSFNNLEGKVPVKGIFENATTV 604
Query: 618 SLSGNGKLCGGLYELQLPSCGSKGS---RKSTVALFKVVIPVTISCLILLGCFI----VV 670
S+ GN LCGG+ QL C S+ +K + L KVVI V++ +LL F+ ++
Sbjct: 605 SIVGNNDLCGGIMGFQLKPCLSQAPSVVKKHSSRLKKVVIGVSVGITLLLLLFMASVTLI 664
Query: 671 YARRRRFVHKSSVTSP--MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEG 728
+ R+R+ +++ +P +E +SY +L AT FS+SNM+G GSFG VY+ +L
Sbjct: 665 WLRKRKKNKETNNPTPSTLEVLHEKISYGDLRNATNGFSSSNMVGSGSFGTVYKALLLTE 724
Query: 729 GLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788
+VAVKVLN+ R+GA KSF+AECE+L++IRHRNL+K++T CSSID G +F+AL+YE+M
Sbjct: 725 KKVVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVKLLTACSSIDFQGNEFRALIYEFM 784
Query: 789 QNGSLEEWLHHSNDQH---DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSN 845
NGSL+ WLH + L+L++RL+IAID+A ++YLH HC PI H DLKPSN
Sbjct: 785 PNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDLKPSN 844
Query: 846 VLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDV 905
VLLD D+ AHV DFGLA+ L + SS G++GT+GY APEYG+G + S+ GDV
Sbjct: 845 VLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDV 904
Query: 906 YSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLL-LEVRTNNSKNP 964
YSFGILLLEMF KRPT+ +F T++ + ALP+R+++IVD +L + +R
Sbjct: 905 YSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFP--- 961
Query: 965 CGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFLSV 1015
+ ECL V +G+ C ESP++R L VV +L + RE F
Sbjct: 962 -------VVECLTMVFEVGLRCCEESPMNR-LATSIVVKELISIRERFFKA 1004
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/1017 (44%), Positives = 617/1017 (60%), Gaps = 43/1017 (4%)
Query: 16 CFNLLLHSYAFAGVP-SNETDRLALLAIKSQL--HDPLGVTSSWNNSINLCQWTGVTCGH 72
LLL FA SNETD ALL KSQ+ ++ V +SWN+S C W GVTCG
Sbjct: 11 ALTLLLQVCIFAQARFSNETDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGR 70
Query: 73 RHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLAN 132
R +RV L L + G++SP +GNLSFLRL++LADN+F IP +VGRL RL L ++
Sbjct: 71 RRERVISLNLGGFKLTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSY 130
Query: 133 NSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASI 192
N G+IP++LS CS L N+L + + +G + +L L ++ N+LTG PAS+
Sbjct: 131 NLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELG-SLSKLAILDLSKNNLTGNFPASL 189
Query: 193 GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252
GNL+ L+ ++ N++ G IP+ + +L + IA N FSG PP++YN+SSLE L L
Sbjct: 190 GNLTSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSFSGGFPPALYNISSLESLSLA 249
Query: 253 GNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPIN 312
N G+L D G LP L ++ N F+G IP + +N S+L D++ N SG +P++
Sbjct: 250 DNSFSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLSGSIPLS 309
Query: 313 FSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLST 372
F +L+NL WL + N+LGN +++ L+FI + NC++L L + NR GG LP SIANLST
Sbjct: 310 FGKLRNLWWLGIRNNSLGNNSSSGLEFIGAVANCTQLEYLDVGYNRLGGELPASIANLST 369
Query: 373 TTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLL 432
T + +G+N ISGTIP IGNLV+L ++ N L+G +P GKL NLQ++ L N +
Sbjct: 370 TLTSLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYSNAI 429
Query: 433 EGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNIT 492
G IP GN+T L +L L SN G IP SLG CR LL L + N+L G +P++I I
Sbjct: 430 SGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIP 489
Query: 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNS 552
+L+ Y+DLSNNFL P EVG L+ LV L S N++SG++P + C S+E+L + NS
Sbjct: 490 SLA-YIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNS 548
Query: 553 FRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFS 612
F G IP +S L S+K +D S+NNLSG+IP+YL +L L LN+S N FEG+VPT GVF
Sbjct: 549 FDGAIP-DISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGVFR 607
Query: 613 NKTRISLSGNGKLCGGLYELQLPSC---GSKGSRKSTVALFKVVIPVTISCLILLGCFIV 669
N T +S+ GN +CGG+ E+QL C S RK KVV + I LL IV
Sbjct: 608 NATAVSVFGNTNICGGVREMQLKPCIVQASPRKRKPLSVRKKVVSGICIGIASLLLIIIV 667
Query: 670 V---YARRRRFVHKSSVTSPMEQQ-----FPIVSYAELSKATGEFSTSNMIGQGSFGFVY 721
+ +R+ + +S +P + VSY EL AT FS++N+IG G+FG V+
Sbjct: 668 ASLCWFMKRKKKNNASDGNPSDSTTLGMFHEKVSYEELHSATSRFSSTNLIGSGNFGNVF 727
Query: 722 RGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781
+G+LG LVAVKVLNL + GA KSF+AECE + IRHRNL+K+IT+CSS+DS G DF+
Sbjct: 728 KGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVKLITVCSSLDSEGNDFR 787
Query: 782 ALVYEYMQNGSLEEWLHHSNDQHDVCD----LSLIQRLHIAIDIAYAIEYLHHHCQPPII 837
ALVYE+M GSL+ WL D V D L+ ++L+IAID+A A+EYLH HC P+
Sbjct: 788 ALVYEFMPKGSLDMWLQLE-DLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHDPVA 846
Query: 838 HGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS 897
H D+KPSN+LLD D+ AHV DFGLA+ LY + SS G++GT+GY APEYGMG
Sbjct: 847 HCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGG 906
Query: 898 EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVR 957
+ S+ GDVYSFGILLLEMF K+PTD F +H + L
Sbjct: 907 QPSIQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSIL----------------- 949
Query: 958 TNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFLS 1014
S G I+E L V+ +G+ CS E P DR + V +L + R F S
Sbjct: 950 ---SGCTSSGGSNAIDEGLRLVLQVGIKCSEEYPRDR-MRTDEAVRELISIRSKFFS 1002
|
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/1000 (45%), Positives = 632/1000 (63%), Gaps = 32/1000 (3%)
Query: 31 SNETDRLALLAIKSQLHDPLGVT-SSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
+ ETD+ ALL KSQ+ + V SWN+S+ LC WTGV CG +H+RVT + L + G
Sbjct: 36 TEETDKQALLEFKSQVSETSRVVLGSWNDSLPLCSWTGVKCGLKHRRVTGVDLGGLKLTG 95
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNL 149
++SP VGNLSFLR ++LADN F+G IP EVG L RL L ++NN F G IP LS CS+L
Sbjct: 96 VVSPFVGNLSFLRSLNLADNFFHGAIPSEVGNLFRLQYLNMSNNLFGGVIPVVLSNCSSL 155
Query: 150 INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLS 209
N+L + G +L LS+ N+LTG+ PAS+GNL+ L++++ N++
Sbjct: 156 STLDLSSNHLEQGVPLEFGSL-SKLVLLSLGRNNLTGKFPASLGNLTSLQMLDFIYNQIE 214
Query: 210 GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLP 269
G IP + +L+ + IA N+F+G PP IYNLSSL L + GN G+L D G LP
Sbjct: 215 GEIPGDIARLKQMIFFRIALNKFNGVFPPPIYNLSSLIFLSITGNSFSGTLRPDFGSLLP 274
Query: 270 KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
L + N+F+G IP + SN S+L LD+ N +GK+P++F RLQNL L L N+L
Sbjct: 275 NLQILYMGINSFTGTIPETLSNISSLRQLDIPSNHLTGKIPLSFGRLQNLLLLGLNNNSL 334
Query: 330 GNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP 389
GN ++ DLDF+ LTNCS+L L + N+ GG LP IANLST ++++G N ISG+IP
Sbjct: 335 GNYSSGDLDFLGALTNCSQLQYLNVGFNKLGGQLPVFIANLSTQLTELSLGGNLISGSIP 394
Query: 390 SGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTEL 449
GIGNLV+L + N LTG +P +G+L+ L+ + L N L G IP SLGN++ LT L
Sbjct: 395 HGIGNLVSLQTLDLGENLLTGKLPPSLGELSELRKVLLYSNGLSGEIPSSLGNISGLTYL 454
Query: 450 ELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSL 509
L +N +G+IPSSLG+C LL LN+ NKL G++P ++ + +L + L++S N L L
Sbjct: 455 YLLNNSFEGSIPSSLGSCSYLLDLNLGTNKLNGSIPHELMELPSL-VVLNVSFNLLVGPL 513
Query: 510 PLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV 569
++G L+ L+ LD+S N++SG+IP TL+ C SLE+L L NSF G IP + L ++
Sbjct: 514 RQDIGKLKFLLALDVSYNKLSGQIPQTLANCLSLEFLLLQGNSFVGPIP-DIRGLTGLRF 572
Query: 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGL 629
LDLS NNLSG IP+Y+ N S L+ LN+S N+F+G VPT+GVF N + +S+ GN LCGG+
Sbjct: 573 LDLSKNNLSGTIPEYMANFSKLQNLNLSLNNFDGAVPTEGVFRNTSAMSVFGNINLCGGI 632
Query: 630 YELQLPSCGSKGSRKSTVALFKVVIPVTISCLILLGCFIVV-------YARRRRFVHKSS 682
LQL C + R+ + + +I + +S ++ + + Y R + V ++
Sbjct: 633 PSLQLQPCSVELPRRHSSV--RKIITICVSAVMAALLLLCLCVVYLCWYKLRVKSVRANN 690
Query: 683 -----VTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVL 737
SP++ + +SY EL K TG FS+SN+IG G+FG V++G LG VA+KVL
Sbjct: 691 NENDRSFSPVKSFYEKISYDELYKTTGGFSSSNLIGSGNFGAVFKGFLGSKNKAVAIKVL 750
Query: 738 NLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL 797
NL ++GA KSF+AECEAL IRHRNL+K++TICSS D G DF+ALVYE+M NG+L+ WL
Sbjct: 751 NLCKRGAAKSFIAECEALGGIRHRNLVKLVTICSSSDFEGNDFRALVYEFMPNGNLDMWL 810
Query: 798 HHSNDQHD---VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854
H + L L RL+IAID+A A+ YLH +C PI H D+KPSN+LLD D+ A
Sbjct: 811 HPDEIEETGNPSRTLGLFARLNIAIDVASALVYLHTYCHNPIAHCDIKPSNILLDKDLTA 870
Query: 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE 914
HV DFGLA+ L D SS G++GT+GY APEYGMG S+ GDVYSFGI+LLE
Sbjct: 871 HVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIVLLE 930
Query: 915 MFIRKRPTDSMFNDGLTIHEFAMKALPQR-VIEIVDPLLLLEVRTNNSKNPCGDGRGGIE 973
+F KRPT+ +F DGLT+H F AL +R ++I D +L + +
Sbjct: 931 IFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFN---------MV 981
Query: 974 ECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013
ECL V +GV CS ESP++R + M ++KL + RE+F
Sbjct: 982 ECLTLVFRVGVSCSEESPVNR-ISMAEAISKLVSIRESFF 1020
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 329/920 (35%), Positives = 492/920 (53%), Gaps = 65/920 (7%)
Query: 147 SNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNL-SVLKVINVEE 205
+ +I G +L G+I+ +I N L L ++ N G++P IG+L LK +++ E
Sbjct: 66 TQVIELDISGRDLGGEISPSIA-NLTGLTVLDLSRNFFVGKIPPEIGSLHETLKQLSLSE 124
Query: 206 NRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY---NLSSLELLYLRGNRLIGSLPI 262
N L G IP LG L YL++ N+ +G++P ++ + SSL+ + L N L G +P+
Sbjct: 125 NLLHGNIPQELGLLNRLVYLDLGSNRLNGSIPVQLFCNGSSSSLQYIDLSNNSLTGEIPL 184
Query: 263 DIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSW 321
+ L +L ++ N +G +P+S SN++NL +DL N+ SG++P S++ L +
Sbjct: 185 NYHCHLKELRFLLLWSNKLTGTVPSSLSNSTNLKWMDLESNMLSGELPSQVISKMPQLQF 244
Query: 322 LLLAGNNL--GNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINM 379
L L+ N+ N N F L N S L L L GN GG + S+ +LS VQI++
Sbjct: 245 LYLSYNHFVSHNNNTNLEPFFASLANSSDLQELELAGNSLGGEITSSVRHLSVNLVQIHL 304
Query: 380 GRNQISGTIPSGIG------------------------NLVNLNGFGIDLNQLTGTIPHE 415
+N+I G+IP I L L + N LTG IP E
Sbjct: 305 DQNRIHGSIPPEISNLLNLTLLNLSSNLLSGPIPRELCKLSKLERVYLSNNHLTGEIPME 364
Query: 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV 475
+G + L LL + N L GSIP S GNL+ L L L N+L G +P SLG C +L L++
Sbjct: 365 LGDIPRLGLLDVSRNNLSGSIPDSFGNLSQLRRLLLYGNHLSGTVPQSLGKCINLEILDL 424
Query: 476 SQNKLTGALPKQIF-NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIP 534
S N LTG +P ++ N+ L LYL+LS+N L+ +PLE+ + ++ +D+S N++SG+IP
Sbjct: 425 SHNNLTGTIPVEVVSNLRNLKLYLNLSSNHLSGPIPLELSKMDMVLSVDLSSNELSGKIP 484
Query: 535 ATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYL 594
L +C +LE+LNLS N F +P SL L +K LD+S N L+G IP + S L++L
Sbjct: 485 PQLGSCIALEHLNLSRNGFSSTLPSSLGQLPYLKELDVSFNRLTGAIPPSFQQSSTLKHL 544
Query: 595 NISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGS-RKSTVALFKVV 653
N S N G V KG FS T S G+ LCG + +Q +C K + + +
Sbjct: 545 NFSFNLLSGNVSDKGSFSKLTIESFLGDSLLCGSIKGMQ--ACKKKHKYPSVLLPVLLSL 602
Query: 654 IPVTISCLI--------LLGCFIVVYARRRRFVHKSSVTSPMEQQFPIVSYAELSKATGE 705
I + C+ G + VYA+ V + + ++P +SY +L ATG
Sbjct: 603 IATPVLCVFGYPLVQRSRFGKNLTVYAKEE--VEDEEKQNQNDPKYPRISYQQLIAATGG 660
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK-SFVAECEALRNIRHRNLI 764
F+ S++IG G FG VY+G+L VAVKVL+ F SF EC+ L+ RHRNLI
Sbjct: 661 FNASSLIGSGRFGHVYKGVL-RNNTKVAVKVLDPKTALEFSGSFKRECQILKRTRHRNLI 719
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+IIT CS F ALV M NGSLE L+ ++ +L LIQ ++I D+A
Sbjct: 720 RIITTCSK-----PGFNALVLPLMPNGSLERHLYPG--EYSSKNLDLIQLVNICSDVAEG 772
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY----TCQVDDVETPSSSI 880
I YLHH+ ++H DLKPSN+LLD +M A V DFG+++ + T DD + S+
Sbjct: 773 IAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLVQGVEETVSTDDSVSFGSTD 832
Query: 881 GIK-GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939
G+ G+VGY+APEYGMG AS GDVYSFG+LLLE+ +RPTD + N+G ++HEF
Sbjct: 833 GLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSH 892
Query: 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999
P + I++ L + C E ++ +I +G++C+ +P R +M
Sbjct: 893 YPDSLEGIIEQ-ALSRWKPQGKPEKC---EKLWREVILEMIELGLVCTQYNPSTRP-DML 947
Query: 1000 NVVAKLCAAREAFLSVYDLM 1019
+V ++ +E + L+
Sbjct: 948 DVAHEMGRLKEYLFACPSLL 967
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 331/989 (33%), Positives = 505/989 (51%), Gaps = 105/989 (10%)
Query: 89 GILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSN 148
G + +G L+ L +DL+ N G IP + G L L +L+L N G IP + CS+
Sbjct: 206 GSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSS 265
Query: 149 LINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL 208
L+ + N L G+I A +G N ++L+ L I N LT +P+S+ L+ L + + EN L
Sbjct: 266 LVQLELYDNQLTGKIPAELG-NLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHL 324
Query: 209 SGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTL 268
G I +G L + L + N F+G P SI NL +L +L + N + G LP D+GL L
Sbjct: 325 VGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGL-L 383
Query: 269 PKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNN 328
L N +N +GPIP+S SN + L +LDL+ N +G++P F R+ NL+++ + N+
Sbjct: 384 TNLRNLSAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRM-NLTFISIGRNH 442
Query: 329 LGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTI 388
+D+ NCS L L + N G L I L + + + N ++G I
Sbjct: 443 FTGEIPDDI------FNCSNLETLSVADNNLTGTLKPLIGKLQKLRI-LQVSYNSLTGPI 495
Query: 389 PSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLL-- 446
P IGNL +LN + N TG IP E+ LT LQ L + N LEG IP + ++ LL
Sbjct: 496 PREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSV 555
Query: 447 ----------------------TELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
T L LQ N G+IP+SL + L + ++S N LTG +
Sbjct: 556 LDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTI 615
Query: 485 PKQIF-NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACT-- 541
P ++ ++ + LYL+ SNN L ++P E+G L+ + E+D+S N SG IP +L AC
Sbjct: 616 PGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNV 675
Query: 542 -SLEY----------------------LNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLS 578
+L++ LNLS NSF G IP S ++ + LDLSSNNL+
Sbjct: 676 FTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLT 735
Query: 579 GQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCG 638
G+IP+ L NLS L++L ++SN+ +G VP GVF N L GN LCG L+ +
Sbjct: 736 GEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCGSKKPLKPCTIK 795
Query: 639 SKGSRKSTVALFKVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSPMEQQFPIVSYA- 697
K S S +V++ + S LL ++V + + + E P + A
Sbjct: 796 QKSSHFSKRT--RVILIILGSAAALLLVLLLVLILTCCKKKEKKIENSSESSLPDLDSAL 853
Query: 698 --------ELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KS 747
EL +AT F+++N+IG S VY+G L E G ++AVKVLNL A K
Sbjct: 854 KLKRFEPKELEQATDSFNSANIIGSSSLSTVYKGQL-EDGTVIAVKVLNLKEFSAESDKW 912
Query: 748 FVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVC 807
F E + L ++HRNL+KI+ KALV +M+NG+LE+ +H S
Sbjct: 913 FYTEAKTLSQLKHRNLVKILGFA----WESGKTKALVLPFMENGNLEDTIHGSAAPIG-- 966
Query: 808 DLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867
SL++++ + + IA I+YLH PI+H DLKP+N+LLD D VAHV DFG A+ L
Sbjct: 967 --SLLEKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGF 1024
Query: 868 CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927
+ D T +S+ +GT+GY+APE+ + + DV+SFGI+++E+ ++RPT
Sbjct: 1025 RE--DGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDE 1082
Query: 928 DG--LTIHEFAMKAL---PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGI--EECLVAVI 980
D +T+ + K++ + ++ ++D L GD + EE + +
Sbjct: 1083 DSQDMTLRQLVEKSIGNGRKGMVRVLDMEL-------------GDSIVSLKQEEAIEDFL 1129
Query: 981 TIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009
+ + C+ P DR +M ++ L R
Sbjct: 1130 KLCLFCTSSRPEDRP-DMNEILTHLMKLR 1157
|
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 344/1022 (33%), Positives = 492/1022 (48%), Gaps = 133/1022 (13%)
Query: 73 RHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLAN 132
R + + L L N S+ G + +G +S L+ + L N G IP + L L TL L+
Sbjct: 237 RLENLEILNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSA 296
Query: 133 NSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASI 192
N+ +G+IP S L++ + N+L G + +I N LE+L ++ L+G++P +
Sbjct: 297 NNLTGEIPEEFWNMSQLLDLVLANNHLSGSLPKSICSNNTNLEQLVLSGTQLSGEIPVEL 356
Query: 193 GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252
LK +++ N L+G IP L +L L + N G + PSI NL++L+ L L
Sbjct: 357 SKCQSLKQLDLSNNSLAGSIPEALFELVELTDLYLHNNTLEGTLSPSISNLTNLQWLVLY 416
Query: 253 GNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPIN 312
N L G LP +I L KL + EN FSG IP N ++L M+D+ N F G++P +
Sbjct: 417 HNNLEGKLPKEIS-ALRKLEVLFLYENRFSGEIPQEIGNCTSLKMIDMFGNHFEGEIPPS 475
Query: 313 FSRLQNLSWLLLAGNNLGNG----------------AANDLDFITP--LTNCSKLIALGL 354
RL+ L+ L L N L G A N L P L L L
Sbjct: 476 IGRLKELNLLHLRQNELVGGLPASLGNCHQLNILDLADNQLSGSIPSSFGFLKGLEQLML 535
Query: 355 YGNRFGGVLPHSIANLSTTTVQINMGRNQISGT-----------------------IPSG 391
Y N G LP S+ +L T +IN+ N+++GT IP
Sbjct: 536 YNNSLQGNLPDSLISLRNLT-RINLSHNRLNGTIHPLCGSSSYLSFDVTNNGFEDEIPLE 594
Query: 392 IGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELEL 451
+GN NL+ + NQLTG IP +GK+ L LL + N L G+IP L LT ++L
Sbjct: 595 LGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDL 654
Query: 452 QSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPL 511
+N+L G IP LG L L +S N+ +LP ++FN T L L L L N LN S+P
Sbjct: 655 NNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKL-LVLSLDGNSLNGSIPQ 713
Query: 512 EVGN------------------------LQNLVELDISRNQVSGEIPATLSACTSLE-YL 546
E+GN L L EL +SRN ++GEIP + L+ L
Sbjct: 714 EIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSAL 773
Query: 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVP 606
+LSYN+F G IP ++ +L ++ LDLS N L+G++P + ++ L YLN+S N+ GK+
Sbjct: 774 DLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKL- 832
Query: 607 TKGVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGS--RKSTVALFKVVIPVTISCLILL 664
K FS S GN LCG L C S ++ ++ VVI IS L +
Sbjct: 833 -KKQFSRWPADSFLGNTGLCGS----PLSRCNRVRSNNKQQGLSARSVVIISAISALTAI 887
Query: 665 GCFIVVYA----RRRRFVHKSSVTSP---------MEQQFPI---------VSYAELSKA 702
G I+V A +R F K S P+ + + ++ +A
Sbjct: 888 GLMILVIALFFKQRHDFFKKVGHGSTAYTSSSSSSQATHKPLFRNGASKSDIRWEDIMEA 947
Query: 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRN 762
T S MIG G G VY+ L G + K+L + KSF E + L IRHR+
Sbjct: 948 THNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRH 1007
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSND--QHDVCDLSLIQRLHIAID 820
L+K++ CSS S G++ L+YEYM+NGS+ +WLH + L RL IA+
Sbjct: 1008 LVKLMGYCSS-KSEGLNL--LIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVG 1064
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-YTCQVDDVETPSSS 879
+A +EYLHH C PPI+H D+K SNVLLD +M AH+GDFGLAK L C D T S++
Sbjct: 1065 LAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENC---DTNTDSNT 1121
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL-------TI 932
+ GY+APEY +A+ DVYS GI+L+E+ K PTDS+F + T
Sbjct: 1122 W-FACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETH 1180
Query: 933 HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPI 992
E A A + + + PLL E E+ V+ I + C+ SP
Sbjct: 1181 LEVAGSARDKLIDPKLKPLLPFE-----------------EDAACQVLEIALQCTKTSPQ 1223
Query: 993 DR 994
+R
Sbjct: 1224 ER 1225
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 335/1075 (31%), Positives = 514/1075 (47%), Gaps = 140/1075 (13%)
Query: 41 AIKSQLHD----PLGVTSSWNNS-INLCQWTGVTCGHRHQRVT----------------- 78
A+ S LH P V S WN S + CQW +TC ++
Sbjct: 42 ALISWLHSSNSPPPSVFSGWNPSDSDPCQWPYITCSSSDNKLVTEINVVSVQLALPFPPN 101
Query: 79 --------KLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLML 130
KL + N ++ G +S +G+ S L +IDL+ N+ G IP +G+L L L L
Sbjct: 102 ISSFTSLQKLVISNTNLTGAISSEIGDCSELIVIDLSSNSLVGEIPSSLGKLKNLQELCL 161
Query: 131 ANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADN-HLTGQLP 189
+N +GKIP L C +L N N L + +G LE + N L+G++P
Sbjct: 162 NSNGLTGKIPPELGDCVSLKNLEIFDNYLSENLPLELG-KISTLESIRAGGNSELSGKIP 220
Query: 190 ASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELL 249
IGN LKV+ + ++SG +P +LGQL L++ SG +P + N S L L
Sbjct: 221 EEIGNCRNLKVLGLAATKISGSLPVSLGQLSKLQSLSVYSTMLSGEIPKELGNCSELINL 280
Query: 250 YLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKV 309
+L N L G+LP ++G L L ++ +NN GPIP +L +DL++N FSG +
Sbjct: 281 FLYDNDLSGTLPKELG-KLQNLEKMLLWQNNLHGPIPEEIGFMKSLNAIDLSMNYFSGTI 339
Query: 310 PINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIAN 369
P +F L NL L+L+ NN+ + L+NC+KL+ + N+ G++P I
Sbjct: 340 PKSFGNLSNLQELMLSSNNITGSIP------SILSNCTKLVQFQIDANQISGLIPPEIGL 393
Query: 370 LSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDF 429
L + + +N++ G IP + NL + N LTG++P + +L NL L L
Sbjct: 394 LKELNIFLGW-QNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLIS 452
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
N + G IP +GN T L L L +N + G IP +G ++L L++S+N L+G +P +I
Sbjct: 453 NAISGVIPLEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEIS 512
Query: 490 NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLS 549
N L + L+LSNN L LPL + +L L LD+S N ++G+IP +L SL L LS
Sbjct: 513 NCRQLQM-LNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILS 571
Query: 550 YNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY---------------- 593
NSF G IP SL ++++LDLSSNN+SG IP+ L ++ L+
Sbjct: 572 KNSFNGEIPSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPER 631
Query: 594 --------------------------------LNISSNHFEGKVPTKGVFSNKTRISLSG 621
LNIS N F G +P VF + G
Sbjct: 632 ISALNRLSVLDISHNMLSGDLSALSGLENLVSLNISHNRFSGYLPDSKVFRQLIGAEMEG 691
Query: 622 NGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTI-----SCLILLGCFIVVYARRRR 676
N LC + S S+ + + V ++ I + + + L +LG V+ A++
Sbjct: 692 NNGLCSKGFRSCFVSNSSQLTTQRGVHSHRLRIAIGLLISVTAVLAVLGVLAVIRAKQMI 751
Query: 677 FVHKSSVTSPMEQQFPIVSYAELSKATGE----FSTSNMIGQGSFGFVYRGILGEGGLLV 732
S T + + +L+ N+IG+G G VY+ + ++
Sbjct: 752 RDDNDSETGENLWTWQFTPFQKLNFTVEHVLKCLVEGNVIGKGCSGIVYKAEMPNREVIA 811
Query: 733 A-----VKVLNLTRK----GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783
V V NL K G SF AE + L +IRH+N+++ + C + ++ + L
Sbjct: 812 VKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNT-----RLL 866
Query: 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843
+Y+YM NGSL LH ++ VC L R I + A + YLHH C PPI+H D+K
Sbjct: 867 MYDYMSNGSLGSLLH---ERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKA 923
Query: 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG 903
+N+L+ D ++GDFGLAK VDD + SS I G+ GY+APEYG + +
Sbjct: 924 NNILIGPDFEPYIGDFGLAKL-----VDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKS 978
Query: 904 DVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKN 963
DVYS+G+++LE+ K+P D DGL I ++ K R I+++D L+ R +
Sbjct: 979 DVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKKI---RDIQVIDQ--GLQARPESE-- 1031
Query: 964 PCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA---KLCAAREAFLSV 1015
+EE ++ + + +LC P DR M++V A ++C RE + V
Sbjct: 1032 --------VEE-MMQTLGVALLCINPIPEDRP-TMKDVAAMLSEICQEREESMKV 1076
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust.
Identities = 342/1005 (34%), Positives = 504/1005 (50%), Gaps = 84/1005 (8%)
Query: 34 TDRLALLAIKSQL----HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
T+ ALL++KS H PL +SWN S C WTGVTC + VT L L ++ G
Sbjct: 26 TELHALLSLKSSFTIDEHSPL--LTSWNLSTTFCSWTGVTCDVSLRHVTSLDLSGLNLSG 83
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLS-GCSN 148
LS V +L L+ + LA N G IP ++ L L L L+NN F+G P LS G N
Sbjct: 84 TLSSDVAHLPLLQNLSLAANQISGPIPPQISNLYELRHLNLSNNVFNGSFPDELSSGLVN 143
Query: 149 LINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL 208
L + NNL G + ++ N +L L + N+ +G++PA+ G VL+ + V N L
Sbjct: 144 LRVLDLYNNNLTGDLPVSL-TNLTQLRHLHLGGNYFSGKIPATYGTWPVLEYLAVSGNEL 202
Query: 209 SGRIPNTLGQLRNSFYLNIAG-NQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLT 267
+G+IP +G L L I N F +PP I NLS L L G +P +IG
Sbjct: 203 TGKIPPEIGNLTTLRELYIGYYNAFENGLPPEIGNLSELVRFDAANCGLTGEIPPEIG-K 261
Query: 268 LPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGN 327
L KL + N F+G I S+L +DL+ N+F+G++P +FS+L+NL+ L L N
Sbjct: 262 LQKLDTLFLQVNAFTGTITQELGLISSLKSMDLSNNMFTGEIPTSFSQLKNLTLLNLFRN 321
Query: 328 NLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGT 387
L +FI + +L L L+ N F G +P + + V +++ N+++GT
Sbjct: 322 KLYGAIP---EFIGEM---PELEVLQLWENNFTGSIPQKLGE-NGRLVILDLSSNKLTGT 374
Query: 388 IPSGI--GN-LVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLT 444
+P + GN L+ L G N L G+IP +GK +L + + N L GSIP L L
Sbjct: 375 LPPNMCSGNRLMTLITLG---NFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKELFGLP 431
Query: 445 LLTELELQSNYLQGNIPSSLGNCR-SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNN 503
L+++ELQ NYL G +P S G L +++S N+L+G+LP I N++ + L L N
Sbjct: 432 KLSQVELQDNYLTGELPISGGGVSGDLGQISLSNNQLSGSLPAAIGNLSGVQKLL-LDGN 490
Query: 504 FLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSS 563
+ S+P E+G LQ L +LD S N SG I +S C L +++LS N G IP L+
Sbjct: 491 KFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGDIPNELTG 550
Query: 564 LKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNG 623
+K + L+LS N+L G IP + ++ L ++ S N+ G VP+ G FS S GN
Sbjct: 551 MKILNYLNLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNS 610
Query: 624 KLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTIS-----CLILLGCFIVVYARRRRFV 678
LCG L CG KG+ +S V + + C ++ ++ AR R
Sbjct: 611 HLCGPY----LGPCG-KGTHQSHVKPLSATTKLLLVLGLLFCSMVFAIVAIIKARSLRNA 665
Query: 679 HKSSVTSPMEQQFPIVSYAELSKATGE----FSTSNMIGQGSFGFVYRGILGEGGLLVAV 734
++ + + + ++ L + N+IG+G G VY+G + +G LVAV
Sbjct: 666 SEA-------KAWRLTAFQRLDFTCDDVLDSLKEDNIIGKGGAGIVYKGTMPKGD-LVAV 717
Query: 735 KVLNLTRKGAFKS--FVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGS 792
K L G+ F AE + L IRHR++++++ CS+ +++ LVYEYM NGS
Sbjct: 718 KRLATMSHGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETN-----LLVYEYMPNGS 772
Query: 793 LEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM 852
L E LH H L R IA++ A + YLHH C P I+H D+K +N+LLD +
Sbjct: 773 LGEVLHGKKGGH----LHWNTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNF 828
Query: 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
AHV DFGLAKFL D T I G+ GY+APEY + DVYSFG++L
Sbjct: 829 EAHVADFGLAKFL-----QDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL 883
Query: 913 LEMFIRKRPTDSMFNDGLTIHEFAMKALPQR---VIEIVDPLLLLEVRTNNSKNPCGDGR 969
LE+ K+P F DG+ I ++ V++++D L S P +
Sbjct: 884 LELITGKKPVGE-FGDGVDIVQWVRSMTDSNKDCVLKVIDLRL--------SSVPVHE-- 932
Query: 970 GGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFLS 1014
+ V + +LC E ++R MR VV L + LS
Sbjct: 933 ------VTHVFYVALLCVEEQAVERP-TMREVVQILTEIPKIPLS 970
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 328/1019 (32%), Positives = 502/1019 (49%), Gaps = 125/1019 (12%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
+ + KL + ++ G L +G+ L+++DL+ N G+IP + +L L+TL+L +N
Sbjct: 105 RSLQKLTISGANLTGTLPESLGDCLGLKVLDLSSNGLVGDIPWSLSKLRNLETLILNSNQ 164
Query: 135 FSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADN-HLTGQLPASIG 193
+GKIP ++S CS L + + N L G I +G LE + I N ++GQ+P+ IG
Sbjct: 165 LTGKIPPDISKCSKLKSLILFDNLLTGSIPTELG-KLSGLEVIRIGGNKEISGQIPSEIG 223
Query: 194 NLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253
+ S L V+ + E +SG +P++LG+L+ L+I SG +P + N S L L+L
Sbjct: 224 DCSNLTVLGLAETSVSGNLPSSLGKLKKLETLSIYTTMISGEIPSDLGNCSELVDLFLYE 283
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
N L GS+P +IG L KL + +N+ G IP N SNL M+DL+LNL SG +P +
Sbjct: 284 NSLSGSIPREIG-QLTKLEQLFLWQNSLVGGIPEEIGNCSNLKMIDLSLNLLSGSIPSSI 342
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTT 373
RL L +++ N T ++NCS L+ L L N+ G++P + L+
Sbjct: 343 GRLSFLEEFMISDNKFSGSIP------TTISNCSSLVQLQLDKNQISGLIPSELGTLTKL 396
Query: 374 TVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE 433
T+ NQ+ G+IP G+ + +L + N LTGTIP + L NL L L N L
Sbjct: 397 TLFFAWS-NQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLS 455
Query: 434 GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITT 493
G IP +GN + L L L N + G IPS +G+ + + L+ S N+L G +P +I + +
Sbjct: 456 GFIPQEIGNCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSE 515
Query: 494 LSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSF 553
L + +DLSNN L SLP V +L L LD+S NQ SG+IPA+L SL L LS N F
Sbjct: 516 LQM-IDLSNNSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLF 574
Query: 554 RGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY-LNISSNHFEGKVPTKGVFS 612
G IP SL +++LDL SN LSG+IP L ++ LE LN+SSN GK+P+K
Sbjct: 575 SGSIPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASL 634
Query: 613 NKTRI-----------------------------------------------SLSGNGKL 625
NK I L GN KL
Sbjct: 635 NKLSILDLSHNMLEGDLAPLANIENLVSLNISYNSFSGYLPDNKLFRQLSPQDLEGNKKL 694
Query: 626 CGGLYELQLPSC----------GSKG--SRKSTVALFKVVIPVTISCLILLGCFIVVYAR 673
C + SC G G SR + L ++ L++LG V+ AR
Sbjct: 695 CSSTQD----SCFLTYRKGNGLGDDGDASRTRKLRLTLALLITLTVVLMILGAVAVIRAR 750
Query: 674 RRRFVHK-SSVTSPMEQQFPIVSYAELSKATGE----FSTSNMIGQGSFGFVYRGILGEG 728
R + S + + QF + +L+ + + N+IG+G G VYR + +
Sbjct: 751 RNIDNERDSELGETYKWQF--TPFQKLNFSVDQIIRCLVEPNVIGKGCSGVVYRADV-DN 807
Query: 729 GLLVAVKVL---------NLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779
G ++AVK L + K SF AE + L IRH+N+++ + C + ++
Sbjct: 808 GEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNT---- 863
Query: 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHG 839
+ L+Y+YM NGSL LH DL R I + A + YLHH C PPI+H
Sbjct: 864 -RLLMYDYMPNGSLGSLLHERRGSSLDWDL----RYRILLGAAQGLAYLHHDCLPPIVHR 918
Query: 840 DLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA 899
D+K +N+L+ D ++ DFGLAK VD+ + S + G+ GY+APEYG +
Sbjct: 919 DIKANNILIGLDFEPYIADFGLAKL-----VDEGDIGRCSNTVAGSYGYIAPEYGYSMKI 973
Query: 900 SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTN 959
+ DVYS+G+++LE+ K+P D +G+ + ++ + + +E++D L RT
Sbjct: 974 TEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQN--RGSLEVLDS--TLRSRTE 1029
Query: 960 NSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA---KLCAAREAFLSV 1015
+ ++ V+ +LC SP +R M++V A ++ RE + V
Sbjct: 1030 AEADE-----------MMQVLGTALLCVNSSPDERP-TMKDVAAMLKEIKQEREEYAKV 1076
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 345/1108 (31%), Positives = 511/1108 (46%), Gaps = 169/1108 (15%)
Query: 34 TDRLALLAIKSQ-LHDPLGVTSSWNN-SINLCQWTGVTCGHRHQR-------VTKLYLRN 84
+D LL +K++ D L +WN C W GV C + VT L L +
Sbjct: 35 SDGQFLLELKNRGFQDSLNRLHNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSS 94
Query: 85 QSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLS 144
++ GI+SP +G L L ++LA N G+IP E+G S+L+ + L NN F G IP ++
Sbjct: 95 MNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEIN 154
Query: 145 GCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVE 204
S L +F N L G + IG + LE+L N+LTG LP S+GNL+ L
Sbjct: 155 KLSQLRSFNICNNKLSGPLPEEIG-DLYNLEELVAYTNNLTGPLPRSLGNLNKLTTFRAG 213
Query: 205 ENRLSGRIPNTLGQLRNSFYLNIAGN------------------------QFSGNVPPSI 240
+N SG IP +G+ N L +A N +FSG +P I
Sbjct: 214 QNDFSGNIPTEIGKCLNLKLLGLAQNFISGELPKEIGMLVKLQEVILWQNKFSGFIPKDI 273
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
NL+SLE L L GN L+G +P +IG + L + +N +G IP S ++ +D
Sbjct: 274 GNLTSLETLALYGNSLVGPIPSEIG-NMKSLKKLYLYQNQLNGTIPKELGKLSKVMEIDF 332
Query: 301 NLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLT---------------- 344
+ NL SG++P+ S++ L L L N L N+L + L
Sbjct: 333 SENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIPPG 392
Query: 345 --NCSKLIALGLYGNRFGGVLPHSIANLS-----------------------TTTVQINM 379
N + + L L+ N GV+P + S + + +N+
Sbjct: 393 FQNLTSMRQLQLFHNSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPPFICQQSNLILLNL 452
Query: 380 GRNQISGTIPSGI------------GN------------LVNLNGFGIDLNQLTGTIPHE 415
G N+I G IP G+ GN LVNL+ +D N+ +G +P E
Sbjct: 453 GSNRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPE 512
Query: 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV 475
IG LQ L+L N ++P + L+ L + SN L G IPS + NC+ L L++
Sbjct: 513 IGTCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDL 572
Query: 476 SQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA 535
S+N G+LP ++ ++ L + L LS N + ++P +GNL +L EL + N SG IP
Sbjct: 573 SRNSFIGSLPPELGSLHQLEI-LRLSENRFSGNIPFTIGNLTHLTELQMGGNLFSGSIPP 631
Query: 536 TLSACTSLEY-LNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYL 594
L +SL+ +NLSYN F G IP + +L + L L++N+LSG+IP ENLS L
Sbjct: 632 QLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGC 691
Query: 595 NISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKV-- 652
N S N+ G++P +F N T S GN LCGG L SC S ++ K
Sbjct: 692 NFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCGG----HLRSCDPSHSSWPHISSLKAGS 747
Query: 653 ---------VIPVTISCLILLGCFIVVYAR------------RRRFVHKSSVTSPMEQQF 691
V V +LL +V + R + F +S + +++F
Sbjct: 748 ARRGRIIIIVSSVIGGISLLLIAIVVHFLRNPVEPTAPYVHDKEPFFQESDIYFVPKERF 807
Query: 692 PIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN-------LTRKGA 744
+ ++ +AT F S ++G+G+ G VY+ ++ G +AVK L
Sbjct: 808 TV---KDILEATKGFHDSYIVGRGACGTVYKAVMPSGK-TIAVKKLESNREGNNNNSNNT 863
Query: 745 FKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH 804
SF AE L IRHRN++++ + C G + L+YEYM GSL E LH
Sbjct: 864 DNSFRAEILTLGKIRHRNIVRLYSFCY---HQGSNSNLLLYEYMSRGSLGELLHGGKSH- 919
Query: 805 DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864
+ R IA+ A + YLHH C+P IIH D+K +N+L+D + AHVGDFGLAK
Sbjct: 920 ---SMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAK- 975
Query: 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
V D+ S + G+ GY+APEY + + D+YSFG++LLE+ K P
Sbjct: 976 -----VIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQP 1030
Query: 925 MFNDGLTIHEFAMKALPQRVI--EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITI 982
+ G + + + + EI+DP L + + I ++ V I
Sbjct: 1031 L-EQGGDLATWTRNHIRDHSLTSEILDPYL---TKVEDDV---------ILNHMITVTKI 1077
Query: 983 GVLCSMESPIDRTLEMRNVVAKLCAARE 1010
VLC+ SP DR MR VV L + E
Sbjct: 1078 AVLCTKSSPSDRP-TMREVVLMLIESGE 1104
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1019 | ||||||
| 359482058 | 1040 | PREDICTED: probable LRR receptor-like se | 0.960 | 0.941 | 0.507 | 0.0 | |
| 147853780 | 1904 | hypothetical protein VITISV_030954 [Viti | 0.960 | 0.514 | 0.507 | 0.0 | |
| 224127492 | 1022 | predicted protein [Populus trichocarpa] | 0.967 | 0.964 | 0.498 | 0.0 | |
| 224081190 | 1011 | predicted protein [Populus trichocarpa] | 0.973 | 0.981 | 0.495 | 0.0 | |
| 224116466 | 1008 | predicted protein [Populus trichocarpa] | 0.972 | 0.983 | 0.491 | 0.0 | |
| 224113117 | 1006 | predicted protein [Populus trichocarpa] | 0.957 | 0.970 | 0.505 | 0.0 | |
| 224097752 | 1025 | predicted protein [Populus trichocarpa] | 0.959 | 0.954 | 0.5 | 0.0 | |
| 224115346 | 1017 | predicted protein [Populus trichocarpa] | 0.946 | 0.947 | 0.509 | 0.0 | |
| 224119022 | 1021 | predicted protein [Populus trichocarpa] | 0.959 | 0.957 | 0.486 | 0.0 | |
| 224117950 | 1018 | predicted protein [Populus trichocarpa] | 0.945 | 0.945 | 0.499 | 0.0 |
| >gi|359482058|ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/996 (50%), Positives = 677/996 (67%), Gaps = 17/996 (1%)
Query: 32 NETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGI 90
NETDRLALLAIK+Q+ DPLG+T+SWN+S++ C WTGVTCGHRHQRV L L + + G
Sbjct: 37 NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLNSLHLVGS 96
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
LSP +GNL+FL ++L NNF+G IP E+GRLSRL L L NNSFSG+IP NLS CSNL+
Sbjct: 97 LSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANLSRCSNLV 156
Query: 151 NFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG 210
F NNL+G+I + +G ++ ++ ++ + N+LTG +P S+GNL+ +K ++ N L G
Sbjct: 157 YFRLGFNNLIGRIPSWLG-SYPKVVRMQLHYNNLTGPVPDSLGNLTSIKSLSFAVNHLEG 215
Query: 211 RIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPK 270
IP LGQL+ ++ + N FSG +P S+YN+SSLE+ L N+L GSLP D+ TLP
Sbjct: 216 SIPQALGQLQTLEFMGLGMNGFSGIIPSSVYNMSSLEVFSLPYNKLYGSLPWDLAFTLPN 275
Query: 271 LTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG 330
L I N+F+G +P+S SN SNL+ D+ ++ F+GKV I+F + NL L LA N LG
Sbjct: 276 LQVLNIGNNDFTGSLPSSLSNASNLLEFDITMSNFTGKVSIDFGGMPNLWGLFLASNPLG 335
Query: 331 NGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPS 390
G A+DL F+ L C L L L G++FGGVLP+SIANLST +++ + NQ+SGTIP
Sbjct: 336 KGEADDLSFLNSLMKCRALKVLDLSGSQFGGVLPNSIANLSTQLMKLKLDNNQLSGTIPP 395
Query: 391 GIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELE 450
GIGNLVNL + N TG+IP IG L L + L N L G IP SLGN+T L L
Sbjct: 396 GIGNLVNLTDLILANNDFTGSIPVLIGNLQMLGRIDLSRNQLSGHIPSSLGNITRLYSLH 455
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
LQ+N+L G IPSS GN L L++S N L G +P+++ ++ +L++ L+L+ N L LP
Sbjct: 456 LQNNHLSGKIPSSFGNLLYLQELDLSYNSLNGTIPEKVMDLVSLTISLNLARNQLTGLLP 515
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVL 570
EV L+NL LD+S N++SGEIP L +C +LE+L++ N F+G IP S SL+ + L
Sbjct: 516 SEVRKLKNLGHLDVSENKLSGEIPDGLGSCLTLEHLHMEGNFFKGSIPPSFISLRGLLDL 575
Query: 571 DLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLY 630
DLS NNLSGQIP++L+ LS L LN+S N+FEG++PTKGVF+N T S++GN KLCGG+
Sbjct: 576 DLSRNNLSGQIPEFLQQLS-LSNLNLSFNNFEGQLPTKGVFNNATSTSVAGNNKLCGGIP 634
Query: 631 ELQLPSCG-SKGSRKSTVALFKVVIPVTISCL-ILLGCFIVVYARRRRFVHKSSVTSPME 688
EL LP+C +K + K++I + L ++L ++V R RR + S TS
Sbjct: 635 ELHLPACPVTKPKTGESKRGLKLMIGLLTGFLGLVLIMSLLVINRLRRVKREPSQTSASS 694
Query: 689 QQFPI-VSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS 747
+ + VSY L KATG FS++N+IG G FG VY+GILG+ +VAVKV+ L ++GA KS
Sbjct: 695 KDLILNVSYDGLFKATGGFSSANLIGTGGFGSVYKGILGQDETVVAVKVIQLHQRGAVKS 754
Query: 748 FVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVC 807
F AECEALRNIRHRNL+K++T CSS+D G DFKALVYE+M NGSLE WLH ++
Sbjct: 755 FKAECEALRNIRHRNLVKVLTTCSSVDYQGNDFKALVYEFMPNGSLENWLHPVPTPDEIN 814
Query: 808 D----LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
D LSL QRL+IAID+A A++YLHHHC PI+H DLKPSN+LLD+DM AHVGDFGLA+
Sbjct: 815 DVLRILSLPQRLNIAIDVASALDYLHHHCHKPIVHCDLKPSNILLDNDMTAHVGDFGLAR 874
Query: 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
F+ + SSSIG+KGT+GY APEYGMG++ S GD YS+GILLLEMF KRPT+
Sbjct: 875 FIPEAAGRSHPSQSSSIGLKGTIGYAAPEYGMGTKVSALGDTYSYGILLLEMFTGKRPTE 934
Query: 924 SMFNDGLTIHEFAMKALPQRVIEIVDPLLL------LEVRTNNSKNPCGDGRGGIEECLV 977
SMF+D L +H F ALP+R+ +I+DP L E +S N R + ECL+
Sbjct: 935 SMFSDQLNLHNFVKMALPERIADIIDPFFLSSEAKEEETTAADSSNLAHMKREKMHECLI 994
Query: 978 AVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013
+++ IGV CS+ESP +R + + + +L R+ L
Sbjct: 995 SILRIGVSCSLESPRER-MAITEAIKELQLIRKILL 1029
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147853780|emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/996 (50%), Positives = 677/996 (67%), Gaps = 17/996 (1%)
Query: 32 NETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGI 90
NETDRLALLAIK+Q+ DPLG+T+SWN+S++ C WTGVTCGHRHQRV L L + + G
Sbjct: 68 NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLSSLHLVGS 127
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
LSP +GNL+FL ++L NNF+G IP E+GRLSRL L L NNSFSG+IP NLS CSNL+
Sbjct: 128 LSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANLSRCSNLV 187
Query: 151 NFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG 210
F NNL+G+I + +G ++ ++ ++ + N+LTG +P S+GNL+ +K ++ N L G
Sbjct: 188 YFRLGFNNLIGRIPSWLG-SYPKVVRMQLHYNNLTGPVPDSLGNLTSIKSLSFAVNHLEG 246
Query: 211 RIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPK 270
IP LGQL+ ++ + N FSG +P S+YN+SSLE+ L N+L GSLP D+ TLP
Sbjct: 247 SIPQALGQLQTLEFMGLGMNGFSGIIPSSVYNMSSLEVFSLPYNKLYGSLPWDLAFTLPN 306
Query: 271 LTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG 330
L I N+F+GP+P+S SN SNL+ D+ ++ F+GKV I+F + NL L LA N LG
Sbjct: 307 LQVLNIGNNDFTGPLPSSLSNASNLLEFDITMSNFTGKVSIDFGGMPNLWGLFLASNPLG 366
Query: 331 NGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPS 390
G A+DL F+ L C L L L G++FGGVLP+SIANLST +++ + NQ+SGTIP
Sbjct: 367 KGEADDLSFLNSLMKCRALKVLDLSGSQFGGVLPNSIANLSTQLMKLKLDNNQLSGTIPP 426
Query: 391 GIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELE 450
GIGNLVNL + N TG+IP IG L L + L N L G IP SLGN+T L L
Sbjct: 427 GIGNLVNLTDLILANNDFTGSIPVLIGNLQMLGRIDLSRNQLSGHIPSSLGNITRLYSLH 486
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
LQ+N+L G IPSS GN L L++S N L G +P+++ ++ +L++ L+L+ N L LP
Sbjct: 487 LQNNHLSGKIPSSFGNLLYLQELDLSYNSLNGTIPEKVMDLVSLTISLNLARNQLTGLLP 546
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVL 570
EV L+NL LD+S N++SGEIP L +C +LE+L++ N F+G IP S SL+ + L
Sbjct: 547 SEVRKLKNLGHLDVSENKLSGEIPDGLGSCLTLEHLHMEGNFFKGSIPPSFISLRGLLDL 606
Query: 571 DLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLY 630
DLS NNLSGQIP++L+ LS L LN+S N+FEG++PTKGVF+N T S++GN KLCGG+
Sbjct: 607 DLSRNNLSGQIPEFLQQLS-LSNLNLSFNNFEGQLPTKGVFNNATSTSVAGNNKLCGGIP 665
Query: 631 ELQLPSCG-SKGSRKSTVALFKVVIPVTISCL-ILLGCFIVVYARRRRFVHKSSVTSPME 688
EL LP+C +K + K++I + L ++L ++V R RR + S TS
Sbjct: 666 ELHLPACPVTKPKTGESKRGLKLMIGLLTGFLGLVLIMSLLVINRLRRVKREPSQTSASS 725
Query: 689 QQFPI-VSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS 747
+ + VSY L KATG FS++N+IG G FG VY+G LG+ +VAVKV+ L ++GA KS
Sbjct: 726 KDLILNVSYDGLFKATGGFSSANLIGTGGFGSVYKGXLGQDETVVAVKVIQLHQRGAVKS 785
Query: 748 FVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVC 807
F AECEALRNIRHRNL+K++T CSS+D G DFKALVYE+M NGSLE WLH ++
Sbjct: 786 FKAECEALRNIRHRNLVKVLTTCSSVDYQGNDFKALVYEFMPNGSLENWLHPVPTPDEIN 845
Query: 808 D----LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
D LSL QRL+IAID+A A++YLHHHC PI+H DLKPSN+LLD+DM AHVGDFGLA+
Sbjct: 846 DVLRILSLPQRLNIAIDVASALDYLHHHCHKPIVHCDLKPSNILLDNDMTAHVGDFGLAR 905
Query: 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
F+ + SSSIG+KGT+GY APEYGMG++ S GD YS+GILLLEMF KRPT+
Sbjct: 906 FIPEAAGRSHPSQSSSIGLKGTIGYAAPEYGMGTKVSALGDTYSYGILLLEMFTGKRPTE 965
Query: 924 SMFNDGLTIHEFAMKALPQRVIEIVDPLLL------LEVRTNNSKNPCGDGRGGIEECLV 977
SMF+D L +H F ALP+R+ +I+DP L E +S N R + ECL+
Sbjct: 966 SMFSDQLNLHNFVKMALPERIADIIDPFFLSSEAKEEETTAADSSNLAHMKREKMHECLI 1025
Query: 978 AVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013
+++ IGV CS+ESP +R + + + +L R+ L
Sbjct: 1026 SILRIGVSCSLESPRER-MAITEAIKELQLIRKILL 1060
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127492|ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|222870745|gb|EEF07876.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/1005 (49%), Positives = 676/1005 (67%), Gaps = 19/1005 (1%)
Query: 20 LLHSYAFAGVPSNETDRLALLAIKSQLH-DPLGVTSSWNNSINLCQWTGVTCGHRHQRVT 78
LL S++F+ NETD+L+LL K+Q+ DPLG SSWN S CQW+GVTCG RHQRV
Sbjct: 20 LLVSFSFSIYGGNETDKLSLLTFKAQITGDPLGKLSSWNESSQFCQWSGVTCGRRHQRVV 79
Query: 79 KLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGK 138
+L L + + G LSPH+GNLSFLR+++LA+N+ IP E+GRL RL+ L+L NN+F G
Sbjct: 80 ELDLHSYQLVGSLSPHIGNLSFLRILNLANNSLSLYIPQELGRLFRLEELVLRNNTFDGG 139
Query: 139 IPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVL 198
IP N+S C+NL NL G++ A +G +L+ L+I N+ G++P S GNLS +
Sbjct: 140 IPANISRCANLRILDFSRGNLTGKLPAELGL-LSKLQVLTIELNNFVGEIPYSFGNLSAI 198
Query: 199 KVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIG 258
I N L G IPN GQL+ L++ N SG +PPSI+NLSSL LL N+L G
Sbjct: 199 NAIYGSINNLEGSIPNVFGQLKRLKILSLGANNLSGMIPPSIFNLSSLTLLSFPVNQLYG 258
Query: 259 SLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQN 318
SLP +GLTLP L F I N F G IP +FSN SNL+ + N F+GKVP S +
Sbjct: 259 SLPHTLGLTLPNLQVFNIHTNQFGGLIPATFSNASNLLSFQIGSNNFNGKVP-PLSSSHD 317
Query: 319 LSWLLLAGNNLGNGAANDLDFITPLTN-CSKLIALGLYGNRFGGVLPHSIANLSTTTVQI 377
L L + NNLG G NDL+F+ PL N + L AL N FGGVLP ++N ST +++
Sbjct: 318 LQVLGVGDNNLGKGENNDLNFVYPLANNMTSLEALDTSDNNFGGVLPEIVSNFSTKLMKM 377
Query: 378 NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP 437
RNQI G+IP+ IGNL+NL G++ NQLTG IP +GKL L L+L+ N + G IP
Sbjct: 378 TFARNQIRGSIPTQIGNLINLEALGLETNQLTGMIPSSMGKLQKLSDLFLNGNKISGMIP 437
Query: 438 FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLY 497
S+GN+T L + ++ N L+G+IP SLGN + LLSL +SQN L+G +PK++ +I +LS+Y
Sbjct: 438 SSMGNMTSLGRVNMRLNNLEGSIPPSLGNWQKLLSLALSQNNLSGPIPKELVSIPSLSMY 497
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
L LS N L SLP+E+ L NL LD+S+N+ SGEIP +L +C SLE L+L N +G I
Sbjct: 498 LVLSENELTGSLPIEMEKLVNLGYLDVSKNRFSGEIPKSLGSCVSLESLHLEENFLQGPI 557
Query: 558 PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRI 617
P++LSSL++++ L+LS NNL+GQIP++LE+ LE LN+S N FEG+VP +G F N + I
Sbjct: 558 PITLSSLRAIQELNLSYNNLTGQIPEFLEDFKLLESLNLSFNDFEGEVPVQGAFQNTSAI 617
Query: 618 SLSGNGKLCGGLYELQLPSCGSK--GSRKSTVALFKVVIPVT-ISCLILLGCFIVVYARR 674
S+ GN KLCGG+ +L L C S + KS L ++ V +IL+ F++ Y R
Sbjct: 618 SIFGNKKLCGGIPQLNLTRCPSSEPTNSKSPTKLIWIIGSVCGFLGVILIISFLLFYCFR 677
Query: 675 RRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAV 734
++ ++ +E FP V+Y +L AT FS++N+IG+GSFG V++GILG ++VAV
Sbjct: 678 KKKDKPAASQPSLETSFPRVAYEDLLGATDGFSSANLIGEGSFGSVFKGILGPDKIVVAV 737
Query: 735 KVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLE 794
KVLNL RKGA KSF+AECEAL++IRHRNL+K++T CSSID G DFKALVYE+M NG+LE
Sbjct: 738 KVLNLLRKGASKSFMAECEALKSIRHRNLVKLLTTCSSIDFQGNDFKALVYEFMVNGNLE 797
Query: 795 EWLH---HSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD 851
EWLH S++ + L L+ RL+IAI +A A+ YLHH CQ PIIH DLKPSN+LLD +
Sbjct: 798 EWLHPVQTSDEANGPKALDLMHRLNIAIHMASALNYLHHDCQMPIIHCDLKPSNILLDTN 857
Query: 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGIL 911
M AHVGDFGLA+F + +SS+G+KGT+GY APEYG+G + S GDVYS+GIL
Sbjct: 858 MTAHVGDFGLARF-----HSEASNQTSSVGLKGTIGYAAPEYGIGGKVSTYGDVYSYGIL 912
Query: 912 LLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGD---G 968
LLEMF KRP D MF DGL +H +A ALP R++E+VDPLL+ E+R+ NS + G G
Sbjct: 913 LLEMFTGKRPVDGMFKDGLNLHSYAKMALPDRIVEVVDPLLVREIRSVNSSDEMGMYHIG 972
Query: 969 RGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013
I CL+ +I +GV CS+E P +R +++ +VV +L ++ L
Sbjct: 973 PHEISACLMTIIKMGVACSVELPRER-MDIGDVVTELNRIKDTLL 1016
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224081190|ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|222855776|gb|EEE93323.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/1012 (49%), Positives = 675/1012 (66%), Gaps = 20/1012 (1%)
Query: 8 SCLATLVCCFNLLL---HSYAFAGVPSNETDRLALLAIKSQLHDPLGVTSSWNNSINLCQ 64
S +++ + C LLL S++F+ NETDRL+LLA K+Q+ DPL SSWN S + C+
Sbjct: 4 SGMSSCIFCPLLLLIIQLSFSFSLHEGNETDRLSLLAFKAQITDPLDALSSWNASTHFCK 63
Query: 65 WTGVTCGHRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSR 124
W+GV CGHRHQR+ +L L++ + G LSPH+GNLSFLR+++L N F +IP E+GRL R
Sbjct: 64 WSGVICGHRHQRIVELNLQSSQLTGNLSPHIGNLSFLRVLNLEGNYFSRDIPQELGRLFR 123
Query: 125 LDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHL 184
L L+L NN+FSG+IP N+S CSNL+ NNL G+I A +G + +L + N+L
Sbjct: 124 LQRLVLGNNTFSGEIPVNISSCSNLLVLHLGSNNLTGKIPAQLG-SLSKLGAFVLQGNNL 182
Query: 185 TGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLS 244
G +P+S GNLS ++ +N L G IP +LG L+ Y +A N SG +P SI N+S
Sbjct: 183 VGDIPSSFGNLSSVQNFFWTKNYLRGGIPESLGNLKRLKYFAVAENDLSGTIPSSICNIS 242
Query: 245 SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNL 304
SL + L N+L GSLP D+GL LP L VI N+ +GPIP + SN S + ++DL+ N
Sbjct: 243 SLAYVSLGQNQLHGSLPPDLGLNLPNLAYLVINFNHLNGPIPATLSNASKIFLVDLSYNN 302
Query: 305 FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLP 364
+GK+P + + L +L LL+ N+LGNG +DL F+ L N + L +LG+ N FGGVLP
Sbjct: 303 LTGKIP-DLASLPDLQKLLVHHNDLGNGEEDDLSFLYTLANSTNLESLGINDNNFGGVLP 361
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQL 424
++N ST I GRNQI G+IP+ IGNL++L+ ++ NQL G IP IGKL NL
Sbjct: 362 EIVSNFSTNLKGITFGRNQIHGSIPTEIGNLISLDTLSLETNQLHGIIPSSIGKLQNLAA 421
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
LYL+ N + GSIP SLGN+T L E+ N LQG IP+SLGN LL L++SQN L+G +
Sbjct: 422 LYLNENKISGSIPSSLGNITSLVEVSFAQNNLQGTIPASLGNWHKLLILDLSQNNLSGPI 481
Query: 485 PKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLE 544
PK++ I++LS+ L L +N L SLP EVG L NL L +S+N++SGEIP +L +C SLE
Sbjct: 482 PKEVLGISSLSVLLYLHDNQLTGSLPSEVGQLVNLGFLRVSKNRLSGEIPKSLDSCKSLE 541
Query: 545 YLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGK 604
L+L N F G +P LSSL+++++L LS NNLSGQIP++L++ LE L++S N FEG+
Sbjct: 542 GLDLGGNFFEGPVP-DLSSLRALQMLLLSYNNLSGQIPQFLKDFKLLETLDLSYNDFEGE 600
Query: 605 VPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCGSKG---SRKSTVALFKVVIPVTISCL 661
VP +GVF N +RIS+ GN KLCGG+ +L LP C S + T + + IP +
Sbjct: 601 VPEQGVFENTSRISVQGNKKLCGGIPQLDLPKCTSNEPARPKSHTKLILIIAIPCGFLGI 660
Query: 662 ILLGCFIVVYARRRRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVY 721
+L+ F++ Y+R+ + + + E F ++Y +L +AT FS+SN++G G+FG VY
Sbjct: 661 VLMTSFLLFYSRKTK--DEPASGPSWESSFQRLTYQDLLQATDGFSSSNLVGAGAFGSVY 718
Query: 722 RGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781
RG L G +VAVKVLNL RKGA KSF+AEC AL NIRHRNL+K+IT CSS D G DFK
Sbjct: 719 RGTLTSDGAVVAVKVLNLLRKGASKSFMAECAALINIRHRNLVKVITACSSNDFQGNDFK 778
Query: 782 ALVYEYMQNGSLEEWLH--HSND-QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIH 838
ALVYE+M NGSLEEWLH H +D + +L L+QRL+IAID+A A++YLH+HCQ P++H
Sbjct: 779 ALVYEFMVNGSLEEWLHPVHISDVTPETRNLDLVQRLNIAIDVASALDYLHNHCQVPVVH 838
Query: 839 GDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE 898
DLKPSNVLL DM A VGDFGLA+FL SSS+G+KGT+GY APEYGMGSE
Sbjct: 839 CDLKPSNVLLGDDMTACVGDFGLARFLPEASNQLPADESSSVGLKGTIGYAAPEYGMGSE 898
Query: 899 ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRT 958
S GDVYS+GILLLEMF +RPTD MF DG +H +A LP V+E VDP L
Sbjct: 899 VSTYGDVYSYGILLLEMFTGRRPTDGMFKDGHNLHNYAKMVLPDNVLEFVDPTLREHEEM 958
Query: 959 NNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010
N++ D + EC+V++I +G+ CS E P +R + + NVV +L RE
Sbjct: 959 NHN-----DDSHKVMECMVSIIKVGLACSAELPGER-MGIANVVVELHRIRE 1004
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116466|ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/1009 (49%), Positives = 670/1009 (66%), Gaps = 18/1009 (1%)
Query: 17 FNLLLHSYAFAGVPSNETDRLALLAIKSQLHDPLGVTSSWNNSINLCQWTGVTCGHRHQR 76
F ++ HS++F+ +E D+L+LLA K+Q+ DP SSWN S++ CQW+GV CG +HQR
Sbjct: 11 FQIIQHSFSFSLARGSEIDKLSLLAFKAQISDPTTKLSSWNESLHFCQWSGVKCGRQHQR 70
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
V +L L + + G LSP +GNLSFLRL+ L +N+F IP E+GRL RL TL+L NNSFS
Sbjct: 71 VIELDLHSSQLVGSLSPSIGNLSFLRLLSLENNSFTNAIPQEIGRLVRLQTLILGNNSFS 130
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
G+IP+N+S CSNL+ GNNL G + A +G + +L+ S N+L G++P S NLS
Sbjct: 131 GEIPSNISHCSNLLKLNLEGNNLTGNLPAGLG-SLSKLQVFSFRKNNLDGKIPLSFENLS 189
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRL 256
+ I+ N + G IP+++G+L+ + ++ N SG +P S+YN+SSL L N+
Sbjct: 190 SIIEIDGTLNNIQGGIPSSIGKLKTLNFFSLGSNNLSGTIPASLYNISSLIHFSLPYNQF 249
Query: 257 IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRL 316
G+LP +IGLTLP L I +N SG +P + N + + L+ N F+GKVP + +
Sbjct: 250 HGTLPPNIGLTLPNLQYLGIHDNRLSGQLPATLINATKFTEIYLSYNKFTGKVP-TLAIM 308
Query: 317 QNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQ 376
NL L + N LG G +DL F+ L+N SKL L + N FGGVLP I+N ST Q
Sbjct: 309 PNLRILSMEENGLGKGEDDDLSFLYTLSNSSKLEDLYIDNNNFGGVLPDIISNFSTKLKQ 368
Query: 377 INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSI 436
+ G NQI GTIP GIGNLV+L+ G++ N LTG+IP IGKL NL +L+ N L GSI
Sbjct: 369 MAFGSNQIRGTIPDGIGNLVSLDTLGLEANHLTGSIPSSIGKLQNLADFFLNENKLSGSI 428
Query: 437 PFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL 496
P SLGN+T L ++ N LQG+IP SLGNC++LL L +SQN L+G +PK++ +I++LS+
Sbjct: 429 PSSLGNITSLMQINFDQNNLQGSIPPSLGNCQNLLVLALSQNNLSGPIPKEVLSISSLSM 488
Query: 497 YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG 556
YL LS N L SLP EVG L L +DIS+N++SGEIPA+L +C SLE+L L N +G
Sbjct: 489 YLVLSENQLTGSLPFEVGKLVTLGYMDISKNRLSGEIPASLGSCESLEHLYLDGNFLQGP 548
Query: 557 IPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR 616
I SL SL++++ L+LS NNLSGQIPK+L +L L+ L++S N EG+VP GVF N +
Sbjct: 549 ISESLRSLRALQDLNLSHNNLSGQIPKFLGDLK-LQSLDLSFNDLEGEVPMHGVFENTSA 607
Query: 617 ISLSGNGKLCGGLYELQLPSCGSKGS--RKSTVALFKVVIPVTISCLILLGCFIVVYARR 674
+S++GN LCGG+ +L LP+C SK + + ST V IP LI + F+ + +
Sbjct: 608 VSIAGNKNLCGGILQLNLPTCRSKSTKPKSSTKLTLTVAIPCGFIGLIFIASFLFLCCLK 667
Query: 675 RRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAV 734
+ + K+ E F V+Y +L +AT FS+ N++G GSFG VY+G+L G+ VAV
Sbjct: 668 KS-LRKTKNELSCEMPFRTVAYKDLLQATNGFSSGNLVGAGSFGSVYKGVLAFDGVTVAV 726
Query: 735 KVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLE 794
KV NL R+GA KSF+ EC AL NIRHRNL+K++ C+ +D G DFKALVYE+M NGSLE
Sbjct: 727 KVFNLLREGASKSFMRECAALLNIRHRNLVKVLFACAGVDVQGNDFKALVYEFMINGSLE 786
Query: 795 EWLH--HSND--QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH 850
EWLH H+ D H +L+LIQRL+IAID+A A++YLH+ C+ PI+H DLKPSNVLLD
Sbjct: 787 EWLHPIHTLDLEVHQPKNLNLIQRLNIAIDVANALDYLHNQCKMPIVHCDLKPSNVLLDG 846
Query: 851 DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGI 910
DM AHVGDFGL KFL + +SS+G+KGTVGY APEYG+GSE S GDV+S+GI
Sbjct: 847 DMTAHVGDFGLLKFLSEASCQSSSSQTSSVGLKGTVGYAAPEYGIGSEVSTFGDVHSYGI 906
Query: 911 LLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRG 970
LLLEM KRPTDSMF DGL +H + ALP RV++I DP LL EV G G
Sbjct: 907 LLLEMITGKRPTDSMFKDGLELHSYVKIALPDRVVDIADPKLLTEVDQ-------GKGTD 959
Query: 971 GIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFLSVYDLM 1019
I ECL+++ IGV CS + P +R +++ NVVA+L + FL Y L+
Sbjct: 960 QIVECLISISKIGVFCSEKFPKER-MDISNVVAELNRTKANFLGRYRLL 1007
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224113117|ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|222865436|gb|EEF02567.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/990 (50%), Positives = 669/990 (67%), Gaps = 14/990 (1%)
Query: 34 TDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGILS 92
TDRL+LLA K+Q+ DPLG SSWN S++ C+W+G CG RHQRV +L L + + G LS
Sbjct: 15 TDRLSLLAFKAQITDDPLGALSSWNESLHFCEWSGAKCGRRHQRVVELDLHSCKLAGSLS 74
Query: 93 PHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINF 152
PH+GNLSFLR++DL++N+F NIP E+GRL RL L L NN+FSG+IP N+S CSNL
Sbjct: 75 PHIGNLSFLRILDLSNNSFSQNIPQELGRLLRLQQLNLENNTFSGEIPANISNCSNLQLI 134
Query: 153 LAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRI 212
GNNL+G+I A +G + + L+ + NHL G++P S NLS +++I V +N L G I
Sbjct: 135 DLKGNNLIGKIPAELG-SLLNLQACLLVTNHLVGEIPLSFENLSSVEIIGVGDNHLQGSI 193
Query: 213 PNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLT 272
P +G+L+ L++ N SG +PPSIYNLSSL L + N+ GSLP D+G LP L
Sbjct: 194 PYGIGKLKRLRKLSVPLNNLSGTIPPSIYNLSSLTLFSVAINQFHGSLPSDLGQKLPSLE 253
Query: 273 NFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNG 332
V N F+GPIP + SN S L ++D N F+GKVP F+ L NL +L + N LGNG
Sbjct: 254 VLVFYANRFNGPIPVTISNASTLSVIDFGNNSFTGKVP-PFANLPNLQYLGIDSNELGNG 312
Query: 333 AANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI 392
DL F+ L N + L LG+ N GG+ P I+N S+ ++MGRNQ+ G+IP I
Sbjct: 313 EEGDLSFLQSLANYTNLEELGMSDNNLGGMFPEIISNFSSQFTTLSMGRNQVRGSIPVDI 372
Query: 393 GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQ 452
GNL++L+ ++ NQLTG IP IGKL NL L L N + G+IP SLGN+T L EL L
Sbjct: 373 GNLISLDTLMLETNQLTGVIPTSIGKLKNLHGLTLVENKISGNIPSSLGNVTSLVELYLS 432
Query: 453 SNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLE 512
+N LQG IPSSL NC++L+SL ++QN L+G L KQ+ + +LS+ LDLS+N L LP E
Sbjct: 433 ANNLQGGIPSSLANCQNLMSLKLAQNNLSGPLTKQVIGMASLSVSLDLSHNQLIGPLPSE 492
Query: 513 VGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDL 572
VG L NL LD+S N++SGEIP +L +C LEYL+L N +G IP LSSL++++ L+L
Sbjct: 493 VGRLVNLGYLDVSHNRLSGEIPGSLGSCIMLEYLHLEGNFLQGSIPELLSSLRALQYLNL 552
Query: 573 SSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYEL 632
S NNL+GQIP++L + L+ L++S NH EG++PT+ VF N + +S+ GN KLCGG+ +L
Sbjct: 553 SYNNLTGQIPRFLADFQLLQRLDLSFNHLEGEMPTQRVFGNVSAVSVLGNDKLCGGISQL 612
Query: 633 QLPSCGSKGSRK---STVALFKVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSPMEQ 689
L C S RK ST + IP +LL +++++ R+ +S S E
Sbjct: 613 NLSRCTSNELRKPKFSTKLKLVISIPCGFIIALLLISSLLIHSWRKTKNEPASGAS-WEV 671
Query: 690 QFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFV 749
F V+Y EL +ATG FS+SN IG GSFG VY+ IL G++VAVKV NL RKGA KS++
Sbjct: 672 SFRRVTYEELYQATGGFSSSNFIGGGSFGSVYKAILAPDGMIVAVKVFNLLRKGASKSYM 731
Query: 750 AECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL---HHSNDQHDV 806
AEC AL NIRHRNL+KI+T CSS+D G DFKALVYE+M NGSLEEWL H S+++ +
Sbjct: 732 AECAALINIRHRNLVKILTACSSLDFRGNDFKALVYEFMVNGSLEEWLHPVHTSDEEREQ 791
Query: 807 CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
+L+LIQRL++AID+A A++YLH+HCQ ++H DLKPSNVLLD DM AHVGDFGLA+F
Sbjct: 792 GNLNLIQRLNVAIDVASALDYLHYHCQMAVVHCDLKPSNVLLDGDMTAHVGDFGLARFRP 851
Query: 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF 926
V +SSIG+KGTVGY APEYG+G+E S GDVYS+GILLLE+ K PTD F
Sbjct: 852 EASVQLSSNQNSSIGLKGTVGYAAPEYGIGNEVSTYGDVYSYGILLLEILTGKTPTDGSF 911
Query: 927 NDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGG---IEECLVAVITIG 983
+GL +H++ ALP RV+E+VDP+LL E+ ++ G R G + ECLV+++ +G
Sbjct: 912 KEGLNLHKYVKMALPDRVVEVVDPILLREIEQTSANASDGMKRIGNDKVLECLVSIMEVG 971
Query: 984 VLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013
V CS++ P +RT + NVVA+L R L
Sbjct: 972 VSCSVDLPRERT-NISNVVAELHRIRGILL 1000
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224097752|ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/990 (50%), Positives = 668/990 (67%), Gaps = 12/990 (1%)
Query: 32 NETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGI 90
NETDRL+LLA+KSQ+ +DP G+ SSWN S++ C W+GV CG RH+RV ++ L + + G
Sbjct: 32 NETDRLSLLALKSQITNDPFGMLSSWNESLHFCDWSGVICGKRHRRVVEIDLHSAQLVGS 91
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
LSPH+GNLSFLR++ L +N F NIP E+G L RL L L NN+F GKIP N+S CSNL+
Sbjct: 92 LSPHIGNLSFLRILKLENNRFSHNIPQELGHLFRLRMLSLENNTFDGKIPVNISHCSNLL 151
Query: 151 NFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG 210
GNNL G++ +G + +L+ N+L G +P+S GNLS + I N L G
Sbjct: 152 ILSLSGNNLTGKLPIELG-SLSKLQVFFFQFNYLVGGIPSSFGNLSAIIQIFGAGNYLQG 210
Query: 211 RIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPK 270
IPN++GQL++ + N +G +PPSIYNLSSL + N+L G+LP D+GLTLP
Sbjct: 211 GIPNSIGQLKSLKSFSFGRNNMTGMIPPSIYNLSSLMRFAVPVNQLHGNLPPDLGLTLPN 270
Query: 271 LTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG 330
L +++ N FSG IP +FSN S + +++L+ N +G+VP + S L L WL++ N LG
Sbjct: 271 LEILLMSFNRFSGSIPPTFSNASTIAVIELSNNNLTGRVP-DLSSLSKLRWLIVDVNYLG 329
Query: 331 NGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPS 390
NG +DL F+ PL N + L L + N FGG+LP I+N S ++ GRNQI G+IPS
Sbjct: 330 NGNDDDLSFLPPLANKTSLEELSINDNNFGGLLPKIISNFSENLKRMTFGRNQIRGSIPS 389
Query: 391 GIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELE 450
GIGNL+ L+ G+++NQLTG IP+ IGKL NL +L L N + G+IP S+GN+T L E+
Sbjct: 390 GIGNLIGLDTLGLEMNQLTGVIPNSIGKLQNLGVLALGGNKISGNIPSSMGNITSLLEVY 449
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
L +N LQG IPSSLGNC++LL L++ QN L+G++PK++ +I + S L LS N L SLP
Sbjct: 450 LSANNLQGRIPSSLGNCQNLLILHLDQNNLSGSIPKEVISIPSSSRILVLSENQLTGSLP 509
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVL 570
LEVG L NL ++S N++SGEIP TL +C SLE+L + N F+G IP SLSSL+++++L
Sbjct: 510 LEVGKLANLGYFNLSHNRLSGEIPRTLGSCVSLEFLYMEGNLFQGPIPESLSSLRALQIL 569
Query: 571 DLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLY 630
+LS NNLSG+IPK+L L L L++S N+ EG+VP +G+F+ + S+ GN KLCGG+
Sbjct: 570 NLSHNNLSGEIPKFLAELKLLTSLDLSFNNLEGEVPVQGIFARASGFSMLGNKKLCGGMP 629
Query: 631 ELQLPSCGSKGSRKSTVAL---FKVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSPM 687
+L L C SK SRK + + IP +IL+ +++ + + + +S SP
Sbjct: 630 QLNLSRCTSKKSRKLKSSTKLKLIIAIPCGFVGIILVVSYMLFFFLKEKKSRPAS-GSPW 688
Query: 688 EQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS 747
E F V+Y +L +AT FS +N+IG GSFG VY+GIL G VAVKV NL R+GA KS
Sbjct: 689 ESTFQRVAYEDLLQATNGFSPANLIGAGSFGSVYKGILRSDGAAVAVKVFNLLREGASKS 748
Query: 748 FVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHH---SNDQH 804
F+AEC AL NIRHRNL+K++T CS ID G DFKALVYE+M NGSLEEWLH S++ H
Sbjct: 749 FMAECAALINIRHRNLVKVLTACSGIDFQGNDFKALVYEFMVNGSLEEWLHPAQISDEAH 808
Query: 805 DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864
DLSL+QRL+IAID+A A++YLH+HCQ I+H DLKPSNVLLD D+ AHVGDFGLA+
Sbjct: 809 RRRDLSLLQRLNIAIDVASALDYLHNHCQIAIVHCDLKPSNVLLDGDLTAHVGDFGLARL 868
Query: 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
L +SSIG+KGT+GY APEYG+GSE S GDVYS+GILLLE+F +RPTD
Sbjct: 869 LPQASHQLCLDQTSSIGLKGTIGYAAPEYGLGSEVSPYGDVYSYGILLLEVFTGRRPTDG 928
Query: 925 MFNDGLTIHEFAMKALPQRVIEIVDPLLLLEV-RTNNSKNPCGDGRGGIEECLVAVITIG 983
+F DGL +H FA ALP V E++DP+L+ E T+ + G ECL A++ +G
Sbjct: 929 LFKDGLNLHNFAKTALPISVAEVLDPVLVTEAEETSGDASRRMSHIGNHMECLAAIVKVG 988
Query: 984 VLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013
V CS E P +R +E+ +V +L R L
Sbjct: 989 VACSAEFPRER-MEISSVAVELRRIRHILL 1017
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115346|ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/996 (50%), Positives = 683/996 (68%), Gaps = 32/996 (3%)
Query: 31 SNETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
SN TDRLALL KS++ HDP + SWN+S++ CQW GV CG RH+RVT L L + + G
Sbjct: 35 SNFTDRLALLDFKSKIIHDPQNIFGSWNDSLHFCQWQGVRCGRRHERVTVLKLESSGLVG 94
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNL 149
+SP +GNLSFL +DL++N G IP +GRL RL L+L NNSF G+IP NLS CS L
Sbjct: 95 SISPALGNLSFLWGLDLSNNTLQGKIPDGLGRLFRLQILVLNNNSFVGEIPGNLSHCSKL 154
Query: 150 INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLS 209
NNLVG+I A + + +LEKL I N+L+G +P IGNL+ L I+ N
Sbjct: 155 DYLGLASNNLVGKIPAEL-VSLSKLEKLVIHKNNLSGAIPPFIGNLTSLNSISAAANNFQ 213
Query: 210 GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLP 269
GRIP+TLGQL+N L + N SG +P IYNLS+L +L L N+L G LP DIG++LP
Sbjct: 214 GRIPDTLGQLKNLESLGLGTNFLSGTIPLPIYNLSTLSILSLSENQLQGYLPSDIGVSLP 273
Query: 270 KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
L I N FSG IP S SN+SNL +L+ N FSGK+ +NF L++L+ + L+ N +
Sbjct: 274 NLQYIQIRANQFSGSIPLSISNSSNLQVLEAGDNSFSGKLSVNFGGLKHLAVVSLSFNKM 333
Query: 330 GNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP 389
G+G +L F+ L NC+ L A+ + GN F G+LP+S+ NLST + +G+NQ+ G I
Sbjct: 334 GSGEPGELSFLDSLINCTSLYAIDIVGNHFEGMLPNSLGNLSTGLTFLGLGQNQLFGGIH 393
Query: 390 SGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTEL 449
SGIGNL+NLN G++ NQL+G IP +IGKL LQ L +N L G IP S+GNLTLL E
Sbjct: 394 SGIGNLINLNTLGLEFNQLSGPIPLDIGKLRMLQRFSLSYNRLSGHIPSSIGNLTLLLEF 453
Query: 450 ELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSL 509
+LQ N LQG IPSS+GNC+ LL L++S+N L+G PK++F I++LS+ LDLS N+ N SL
Sbjct: 454 DLQGNQLQGTIPSSIGNCQKLLLLHLSRNNLSGNAPKELFAISSLSVSLDLSQNYFNGSL 513
Query: 510 PLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV 569
P E+G+L++L +L++S N+ SGEIP+TL++CTSLEYL + +N F+G IP S S+L+ ++
Sbjct: 514 PSEIGSLKSLAKLNVSYNEFSGEIPSTLASCTSLEYLYMQHNFFQGSIPSSFSTLRGIQK 573
Query: 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGL 629
LDLS NNLSGQIPK+L+ + L LN+S N FEG+VPTKG F N T IS+ GN KLCGG+
Sbjct: 574 LDLSHNNLSGQIPKFLDTFALLT-LNLSFNDFEGEVPTKGAFGNATAISVDGNKKLCGGI 632
Query: 630 YELQLPSCGSKGSRKSTVALFKVVIPVTISCLIL---LGCFIVVYARRRRFVHKSSVTSP 686
EL+LP C K S+K + L+ +++ +TI+C L + F+++Y RR+ +SS S
Sbjct: 633 SELKLPKCNFKKSKKWKIPLWLILL-LTIACGFLGVAVVSFVLLYLSRRKRKEQSSELS- 690
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
+++ P VSY L KAT FS+ N+IG+G FG VYRGIL + +VA+KVLNL +GA K
Sbjct: 691 LKEPLPKVSYEMLLKATNGFSSDNLIGEGGFGSVYRGILDQDDTVVAIKVLNLQTRGASK 750
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGS---LEEWLHHSNDQ 803
SFVAECEALRN+RHRNL+KIIT CSS+D G +FKALVYE+M NGS LE+WL+ N
Sbjct: 751 SFVAECEALRNVRHRNLLKIITSCSSVDFQGNEFKALVYEFMPNGSLEILEKWLYSHN-- 808
Query: 804 HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
L L+QRL+I ID+A A+EYLHH ++H DLKPSN+LLD +MVAHV DFG+AK
Sbjct: 809 ---YFLDLLQRLNIMIDVASALEYLHHGNATLVVHCDLKPSNILLDENMVAHVSDFGIAK 865
Query: 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
L + + + ++ + TVGY+APEYG+GS+ S+ GD+YS+GI LLEM RKRPTD
Sbjct: 866 LL-----GEGHSITQTMTL-ATVGYMAPEYGLGSQVSIYGDIYSYGIPLLEMITRKRPTD 919
Query: 924 SMFNDGLTIHEFAMKALPQRVIEIVDPLLL-----LEVRTNNS--KNPCGDGR--GGIEE 974
+MF L +H FA ALP++V+ IVDP LL R +N+ +NP G + E
Sbjct: 920 NMFEGTLNLHGFARMALPEQVLNIVDPSLLSSGNVKAGRMSNTSLENPTSSSGEIGTLVE 979
Query: 975 CLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010
C+ ++I IG+ CS E P DR LE+ + + +LC+ R+
Sbjct: 980 CVTSLIQIGLSCSRELPRDR-LEINHAITELCSIRK 1014
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224119022|ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/992 (48%), Positives = 669/992 (67%), Gaps = 14/992 (1%)
Query: 31 SNETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
+NETD LAL+ K+++ DPLG+ SSWN++I+ CQW GV+CG RHQRV L L++ + G
Sbjct: 26 TNETDLLALIQFKNKIVDDPLGIMSSWNSTIHFCQWHGVSCGRRHQRVRVLALQSLKLSG 85
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNL 149
+SPH+GNLSFLR + L +N+F+ IP +VGRL L L NNS SG+IP ++S CSNL
Sbjct: 86 TISPHIGNLSFLRELHLQNNSFFHEIPPQVGRLRSLQIFSLHNNSISGQIPPSISDCSNL 145
Query: 150 INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENR-L 208
I+ NNL G+I +G + ++L+ L++ N LTG +P S+GNLS L+++ +E+N+ L
Sbjct: 146 ISIKIEFNNLTGEIPMELG-SLLKLKNLTLEVNGLTGTIPPSLGNLSSLEILRLEKNKIL 204
Query: 209 SGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTL 268
G +P+TLG+L+N LN+ N+ SG +PPSI+NLSSL L + N G+LP DIG++L
Sbjct: 205 FGNVPSTLGKLKNLRILNLMDNRLSGVIPPSIFNLSSLTALDIGFNLFHGNLPSDIGISL 264
Query: 269 PKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNN 328
P L F IA N F+G IP S SN SN+ +L ++LN +G+VP +L L++ L N+
Sbjct: 265 PNLEFFSIASNQFTGSIPVSISNASNIELLQVSLNNLTGEVP-TLEKLHRLNFFTLFSNH 323
Query: 329 LGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTI 388
LG+G ANDL F++ LTN + L L + N FGG LP I+NLST I++ N I G+I
Sbjct: 324 LGSGQANDLSFLSSLTNATTLEYLSIKRNNFGGELPKQISNLSTMLGVISLPENNILGSI 383
Query: 389 PSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTE 448
P+GI LVNL F + N+++G IP IG+L NL+ L LD+N L G IP S+GNLT L
Sbjct: 384 PAGIEKLVNLKVFDVGNNKISGIIPSSIGELQNLEGLVLDYNNLSGRIPSSVGNLTKLMA 443
Query: 449 LELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDS 508
L L N L+G+IPSSLGNC+ LL L + N L+G +P +F I +L LY+ S N + S
Sbjct: 444 LYLGDNSLEGSIPSSLGNCKKLLVLTLCGNNLSGDIPPGLFGIFSL-LYICFSKNHFSGS 502
Query: 509 LPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVK 568
LP+E+G L NL LD+S N +SGEIP++L C SLE L ++ N F G IP +LSSL+ V
Sbjct: 503 LPIEIGKLINLEFLDVSGNMLSGEIPSSLGGCISLEDLYMNSNFFHGSIPSALSSLRGVL 562
Query: 569 VLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGG 628
+ S NNLSG+IP++ + + LE L++S N+FEG +P +G+F N T +S+ GN +LCGG
Sbjct: 563 QFNFSHNNLSGKIPEFFQGFNSLEMLDLSYNNFEGMIPDEGIFKNSTAVSVIGNSQLCGG 622
Query: 629 LYELQLPSCGSKGSRKSTVALFKVVIPVTI--SCLILLGCFIVVYARRRRFVHKSSVTSP 686
EL LP C ++ + L + +T+ + +++ C + +RR+R + S
Sbjct: 623 NTELGLPRCKVHQPKRLKLKLKIAIFAITVLLALALVVTCLFLCSSRRKR---REIKLSS 679
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
M + VSY L KAT FS+SN++G GSFG VY+G+L + G+++AVKVLNL R+GA +
Sbjct: 680 MRNELLEVSYQILLKATNGFSSSNLVGIGSFGSVYKGMLDQNGMVIAVKVLNLMRQGASR 739
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-HSNDQHD 805
SF+AECEALRNIRHRNL+K++T CSSID HG DFKA+VYE+M NGSLE+WLH
Sbjct: 740 SFIAECEALRNIRHRNLVKVLTACSSIDYHGNDFKAIVYEFMANGSLEDWLHPTGTGGGT 799
Query: 806 VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
L+L+QRL+IAID+A A+EYLHHHC+ PI H DLKPSNVLLD ++ HVGDFGLAKFL
Sbjct: 800 TLTLNLLQRLNIAIDVACALEYLHHHCEMPIAHCDLKPSNVLLDDELTGHVGDFGLAKFL 859
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
+D S+SIG++GT+GY PEYG+G E S GD YS+GILLLEMF KRPTD M
Sbjct: 860 SGASLDYPTNESTSIGVRGTIGYAPPEYGVGGEVSAYGDTYSYGILLLEMFTGKRPTDEM 919
Query: 926 FNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRT-NNSKNPCGDGRGGIE-ECLVAVITIG 983
F +G +H F +A+P++V +I DP LL E T ++ K+ R ECL +++ IG
Sbjct: 920 FREGSNLHNFVKRAVPEQVKQITDPTLLQEEPTGDDDKHEISSMRNSRPLECLNSILRIG 979
Query: 984 VLCSMESPIDRTLEMRNVVAKLCAAREAFLSV 1015
+ CS+E P +R +++ + VA+L + R S
Sbjct: 980 ISCSVEFPRER-MKISDAVAQLHSVRNELQST 1010
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117950|ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|222858369|gb|EEE95916.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/969 (49%), Positives = 646/969 (66%), Gaps = 6/969 (0%)
Query: 31 SNETDRLALLAIKS-QLHDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
+NETDR ALLA+K L DP SSWN S++ C W GV CG +HQRV L L + + G
Sbjct: 31 TNETDREALLAMKHLVLSDPFRALSSWNASLHFCTWHGVACGSKHQRVIALNLSSLQLAG 90
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNL 149
LSPH+GNL+FLR IDL+ NNF+G IP EVG+L RL L L+NNSF ++P NLS CSNL
Sbjct: 91 FLSPHIGNLTFLRRIDLSKNNFHGTIPEEVGQLFRLQYLSLSNNSFQDELPGNLSHCSNL 150
Query: 150 INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLS 209
GNNL G+I + +G + L + NHLTG LP S GNLS L +++ EN L
Sbjct: 151 RFLGMEGNNLTGKIPSELG-SLSNLRAPGLLKNHLTGSLPRSFGNLSSLVSLSLRENNLE 209
Query: 210 GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLP 269
G IP +L YL+++ N SG VP +YN+SSL + + N L G LP+D+GLTLP
Sbjct: 210 GSIPIEFERLSRLAYLDLSFNNLSGMVPEELYNISSLSTVAMVSNNLSGRLPLDLGLTLP 269
Query: 270 KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
L + N F GP+P S N+S L LDL N FSG VP N L+ L L N +
Sbjct: 270 NLQTLYLGLNRFLGPVPASIVNSSGLEYLDLASNSFSGPVPKNLGSLRYLQILNFGFNKI 329
Query: 330 GNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP 389
G+ NDL F+T LTNC+ L +GLY + GG+LP+SIANLST + M N I+GTIP
Sbjct: 330 GDKNNNDLTFLTSLTNCTDLKEIGLYKSNLGGLLPNSIANLSTNLYYLVMWGNYITGTIP 389
Query: 390 SGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTEL 449
+ IGNL + + N LTG +P IGKL L+ Y+ N + G IP +LGN++ L +L
Sbjct: 390 TEIGNLKSSQALDLADNMLTGRLPESIGKLVMLKEFYVHLNKISGEIPSALGNISGLLKL 449
Query: 450 ELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSL 509
+L N L+G IP SL NC SL L++S N L+G +P++IF++++L+L L L +N L+ L
Sbjct: 450 DLGVNLLEGTIPVSLANCTSLNLLDISHNHLSGFIPEKIFSLSSLTLGLLLGSNRLSGRL 509
Query: 510 PLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV 569
P +V N++NL++LDISRN++ GEIP+TL C LE LN+S N RG IP S L+S++V
Sbjct: 510 PSQVVNMRNLIQLDISRNKICGEIPSTLETCLMLETLNMSGNFLRGTIPSSFKKLRSIRV 569
Query: 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGL 629
LD+S NNLSGQIP++L +L FL LN+S N FEGKVP +G F N ++ S++GN KLCGG+
Sbjct: 570 LDVSCNNLSGQIPEFLADLPFLSNLNLSFNEFEGKVPAEGAFENASQFSIAGNNKLCGGI 629
Query: 630 YELQLPSC-GSKGSRKSTVALFKVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSPME 688
+QLP C +K ++ + + V V + +LL C V R+ K S ME
Sbjct: 630 KAIQLPECPRTKQHKRFSKRVVIVASSVAVFITLLLACIFAVGYRKLSANRKPLSASTME 689
Query: 689 QQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSF 748
++F IVSY +L++AT FS++NMIG G +G VY+GILG G VA+KVL ++GA ++F
Sbjct: 690 KKFQIVSYQDLARATDGFSSANMIGDGGYGSVYKGILGPDGQTVAIKVLKPEQRGANRTF 749
Query: 749 VAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN-DQHDVC 807
VAECE LR IRHRNL+KI+T CSSID G DFKALV+++M GSLE WLH S + +
Sbjct: 750 VAECETLRRIRHRNLVKIVTACSSIDFKGNDFKALVFDFMPGGSLESWLHPSAVESQNSK 809
Query: 808 DLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867
LSL+QR+ + ID+A A++YLH+HC I+H DLKPSN+LLD+D+ AHVGDFGLA+ L
Sbjct: 810 RLSLLQRISMLIDVASALDYLHNHCDEQIVHCDLKPSNILLDNDLTAHVGDFGLARILSA 869
Query: 868 CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927
+ T +SS+G++GTVGYVAPEYGMG + S++GDVYS+GILLLEMF KRPTDSMF
Sbjct: 870 ATGETPSTSTSSLGVRGTVGYVAPEYGMGGQVSISGDVYSYGILLLEMFTGKRPTDSMFT 929
Query: 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVR--TNNSKNPCGDGRGGIEECLVAVITIGVL 985
++H FA ALP +V EI+DPLL ++ + +S+N R IE CL++++ IGVL
Sbjct: 930 GNNSLHNFAKTALPDQVSEIIDPLLKIDTQQLAESSRNGPSSSRDKIEGCLISILQIGVL 989
Query: 986 CSMESPIDR 994
CS+E P +R
Sbjct: 990 CSVELPSER 998
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1019 | ||||||
| TAIR|locus:2075661 | 1025 | AT3G47110 [Arabidopsis thalian | 0.949 | 0.944 | 0.436 | 3.7e-206 | |
| TAIR|locus:2079142 | 1010 | AT3G47570 [Arabidopsis thalian | 0.962 | 0.971 | 0.425 | 6.2e-204 | |
| TAIR|locus:2079157 | 1011 | AT3G47580 [Arabidopsis thalian | 0.949 | 0.957 | 0.415 | 2.3e-197 | |
| TAIR|locus:2075631 | 1009 | AT3G47090 [Arabidopsis thalian | 0.966 | 0.976 | 0.412 | 1.6e-196 | |
| TAIR|locus:2149922 | 1031 | EFR "EF-TU receptor" [Arabidop | 0.952 | 0.941 | 0.419 | 1.3e-194 | |
| UNIPROTKB|Q40640 | 1025 | Xa21 "Receptor kinase-like pro | 0.947 | 0.942 | 0.419 | 1.4e-190 | |
| UNIPROTKB|O24435 | 813 | O24435 "Receptor kinase-like p | 0.691 | 0.867 | 0.406 | 1.6e-132 | |
| TAIR|locus:2005540 | 999 | HAE "HAESA" [Arabidopsis thali | 0.897 | 0.915 | 0.320 | 3.6e-120 | |
| TAIR|locus:2175703 | 502 | AT5G39390 [Arabidopsis thalian | 0.342 | 0.695 | 0.490 | 4e-114 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.833 | 0.755 | 0.315 | 9.9e-114 |
| TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1994 (707.0 bits), Expect = 3.7e-206, P = 3.7e-206
Identities = 436/998 (43%), Positives = 598/998 (59%)
Query: 31 SNETDRLALLAIKSQLHDPLGVT-SSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
+ ETD+ ALL KSQ+ + V SWN+S+ LC WTGV CG +H+RVT + L + G
Sbjct: 36 TEETDKQALLEFKSQVSETSRVVLGSWNDSLPLCSWTGVKCGLKHRRVTGVDLGGLKLTG 95
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNL 149
++SP VGNLSFLR ++LADN F+G IP EVG L RL L ++NN F G IP LS CS+L
Sbjct: 96 VVSPFVGNLSFLRSLNLADNFFHGAIPSEVGNLFRLQYLNMSNNLFGGVIPVVLSNCSSL 155
Query: 150 INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLS 209
N+L + G + +L LS+ N+LTG+ PAS+GNL+ L++++ N++
Sbjct: 156 STLDLSSNHLEQGVPLEFG-SLSKLVLLSLGRNNLTGKFPASLGNLTSLQMLDFIYNQIE 214
Query: 210 GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLP 269
G IP + +L+ + IA N+F+G PP IYNLSSL L + GN G+L D G LP
Sbjct: 215 GEIPGDIARLKQMIFFRIALNKFNGVFPPPIYNLSSLIFLSITGNSFSGTLRPDFGSLLP 274
Query: 270 KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWXXXXXXXX 329
L + N+F+G IP + SN S+L LD+ N +GK+P++F RLQNL
Sbjct: 275 NLQILYMGINSFTGTIPETLSNISSLRQLDIPSNHLTGKIPLSFGRLQNLLLLGLNNNSL 334
Query: 330 XXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP 389
DLDF+ LTNCS+L L + N+ GG LP IANLST ++++G N ISG+IP
Sbjct: 335 GNYSSGDLDFLGALTNCSQLQYLNVGFNKLGGQLPVFIANLSTQLTELSLGGNLISGSIP 394
Query: 390 SGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXXXXXEGSIPFSLGNXXXXXXX 449
GIGNLV+L + N LTG +P +G+ G IP SLGN
Sbjct: 395 HGIGNLVSLQTLDLGENLLTGKLPPSLGELSELRKVLLYSNGLSGEIPSSLGNISGLTYL 454
Query: 450 XXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTXXXXXXXXXXXXXXXX 509
+N +G+IPSSLG+C LL LN+ NKL G++P ++ + +
Sbjct: 455 YLLNNSFEGSIPSSLGSCSYLLDLNLGTNKLNGSIPHELMELPSLVVLNVSFNLLVGPLR 514
Query: 510 XXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPXXXXXXXXXXX 569
++G L+ L+ LD+S N++SG+IP TL+ C SLE+L L NSF G IP
Sbjct: 515 Q-DIGKLKFLLALDVSYNKLSGQIPQTLANCLSLEFLLLQGNSFVGPIPDIRGLTGLRFL 573
Query: 570 XXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGL 629
NNLSG IP+Y+ N S L+ LN+S N+F+G VPT+GVF N + +S+ GN LCGG+
Sbjct: 574 DLSK-NNLSGTIPEYMANFSKLQNLNLSLNNFDGAVPTEGVFRNTSAMSVFGNINLCGGI 632
Query: 630 YELQLPSCGSKGSRK-STVA-LFKVVIPVTISCLILLGCFIVVYA----RRRRFVHKSSV 683
LQL C + R+ S+V + + + ++ L+LL C VVY R + V ++
Sbjct: 633 PSLQLQPCSVELPRRHSSVRKIITICVSAVMAALLLL-CLCVVYLCWYKLRVKSVRANNN 691
Query: 684 T-----SPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN 738
SP++ + +SY EL K TG FS+SN+IG G+FG V++G LG VA+KVLN
Sbjct: 692 ENDRSFSPVKSFYEKISYDELYKTTGGFSSSNLIGSGNFGAVFKGFLGSKNKAVAIKVLN 751
Query: 739 LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH 798
L ++GA KSF+AECEAL IRHRNL+K++TICSS D G DF+ALVYE+M NG+L+ WLH
Sbjct: 752 LCKRGAAKSFIAECEALGGIRHRNLVKLVTICSSSDFEGNDFRALVYEFMPNGNLDMWLH 811
Query: 799 HSNDQ---HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855
+ + L L RL+IAID+A A+ YLH +C PI H D+KPSN+LLD D+ AH
Sbjct: 812 PDEIEETGNPSRTLGLFARLNIAIDVASALVYLHTYCHNPIAHCDIKPSNILLDKDLTAH 871
Query: 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
V DFGLA+ L D SS G++GT+GY APEYGMG S+ GDVYSFGI+LLE+
Sbjct: 872 VSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIVLLEI 931
Query: 916 FIRKRPTDSMFNDGLTIHEFAMKALPQR-VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEE 974
F KRPT+ +F DGLT+H F AL +R ++I D +L + + E
Sbjct: 932 FTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFN---------MVE 982
Query: 975 CLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012
CL V +GV CS ESP++R + M ++KL + RE+F
Sbjct: 983 CLTLVFRVGVSCSEESPVNR-ISMAEAISKLVSIRESF 1019
|
|
| TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1973 (699.6 bits), Expect = 6.2e-204, P = 6.2e-204
Identities = 432/1016 (42%), Positives = 601/1016 (59%)
Query: 13 LVCCFN--LLLHSYAFAGVPSNETDRLALLAIKSQL-HDPLGVTSSWNNSINLCQWTGVT 69
L+ FN +LL ++ F ++ETDR ALL KSQ+ D V SSWN+S LC W GVT
Sbjct: 5 LLLAFNALMLLETHGF----TDETDRQALLQFKSQVSEDKRVVLSSWNHSFPLCNWKGVT 60
Query: 70 CGHRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLM 129
CG +++RVT L L +GG++SP +GNLSFL +DL +N F G IP EVG+LSRL+ L
Sbjct: 61 CGRKNKRVTHLELGRLQLGGVISPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLD 120
Query: 130 LANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLP 189
+ N G IP L CS L+N N L G + + +G + L +L++ N++ G+LP
Sbjct: 121 MGINYLRGPIPLGLYNCSRLLNLRLDSNRLGGSVPSELG-SLTNLVQLNLYGNNMRGKLP 179
Query: 190 ASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELL 249
S+GNL++L+ + + N L G IP+ + QL + L + N FSG PP++YNLSSL+LL
Sbjct: 180 TSLGNLTLLEQLALSHNNLEGEIPSDVAQLTQIWSLQLVANNFSGVFPPALYNLSSLKLL 239
Query: 250 YLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKV 309
+ N G L D+G+ LP L +F + N F+G IP + SN S L L +N N +G +
Sbjct: 240 GIGYNHFSGRLRPDLGILLPNLLSFNMGGNYFTGSIPTTLSNISTLERLGMNENNLTGSI 299
Query: 310 PINFSRLQNLSWXXXXXXXXXXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIAN 369
P F + NL DL+F+T LTNC++L LG+ NR GG LP SIAN
Sbjct: 300 P-TFGNVPNLKLLFLHTNSLGSDSSRDLEFLTSLTNCTQLETLGIGRNRLGGDLPISIAN 358
Query: 370 LSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXX 429
LS V +++G ISG+IP IGNL+NL +D N L+G +P +GK
Sbjct: 359 LSAKLVTLDLGGTLISGSIPYDIGNLINLQKLILDQNMLSGPLPTSLGKLLNLRYLSLFS 418
Query: 430 XXXEGSIPFSLGNXXXXXXXXXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
G IP +GN +N +G +P+SLGNC LL L + NKL G +P +I
Sbjct: 419 NRLSGGIPAFIGNMTMLETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGTIPLEIM 478
Query: 490 NITTXXXXXXXXXXXXXXXXXXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLS 549
I ++G LQNL L + N++SG++P TL C ++E L L
Sbjct: 479 KIQQLLRLDMSGNSLIGSLPQ-DIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLE 537
Query: 550 YNSFRGGIPXXXXXXXXXXXXXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKG 609
N F G IP N+LSG IP+Y + S LEYLN+S N+ EGKVP KG
Sbjct: 538 GNLFYGDIPDLKGLVGVKEVDLSN-NDLSGSIPEYFASFSKLEYLNLSFNNLEGKVPVKG 596
Query: 610 VFSNKTRISLSGNGKLCGGLYELQLPSCGSKGS---RKSTVALFKVVIPVTISCLILLGC 666
+F N T +S+ GN LCGG+ QL C S+ +K + L KVVI V++ +LL
Sbjct: 597 IFENATTVSIVGNNDLCGGIMGFQLKPCLSQAPSVVKKHSSRLKKVVIGVSVGITLLLLL 656
Query: 667 FI----VVYARRRRFVHKSSVTSP--MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFV 720
F+ +++ R+R+ +++ +P +E +SY +L AT FS+SNM+G GSFG V
Sbjct: 657 FMASVTLIWLRKRKKNKETNNPTPSTLEVLHEKISYGDLRNATNGFSSSNMVGSGSFGTV 716
Query: 721 YRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780
Y+ +L +VAVKVLN+ R+GA KSF+AECE+L++IRHRNL+K++T CSSID G +F
Sbjct: 717 YKALLLTEKKVVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVKLLTACSSIDFQGNEF 776
Query: 781 KALVYEYMQNGSLEEWLHHSNDQ--HDVC-DLSLIQRLHIAIDIAYAIEYLHHHCQPPII 837
+AL+YE+M NGSL+ WLH + H L+L++RL+IAID+A ++YLH HC PI
Sbjct: 777 RALIYEFMPNGSLDMWLHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIA 836
Query: 838 HGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS 897
H DLKPSNVLLD D+ AHV DFGLA+ L + SS G++GT+GY APEYG+G
Sbjct: 837 HCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGG 896
Query: 898 EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLL-LEV 956
+ S+ GDVYSFGILLLEMF KRPT+ +F T++ + ALP+R+++IVD +L + +
Sbjct: 897 QPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGL 956
Query: 957 RTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012
R P + ECL V +G+ C ESP++R L VV +L + RE F
Sbjct: 957 RVGF---P-------VVECLTMVFEVGLRCCEESPMNR-LATSIVVKELISIRERF 1001
|
|
| TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1911 (677.8 bits), Expect = 2.3e-197, P = 2.3e-197
Identities = 414/996 (41%), Positives = 573/996 (57%)
Query: 31 SNETDRLALLAIKSQLHD-PLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
++ETDR ALL KSQ+ + V SSWNNS LC W VTCG +H+RVT L L +GG
Sbjct: 21 TDETDRQALLEFKSQVSEGKRDVLSSWNNSFPLCNWKWVTCGRKHKRVTHLNLGGLQLGG 80
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNL 149
I+SP +GN+SFL +DL+DN F G IP EVG L RL+ L +A NS G IP LS CS L
Sbjct: 81 IVSPSIGNVSFLISLDLSDNAFGGIIPREVGNLFRLEHLYMAFNSLEGGIPATLSNCSRL 140
Query: 150 INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLS 209
+N + N L + + +G + +L L + N+L G+LP S+GNL+ LK + +N +
Sbjct: 141 LNLDLYSNPLRQGVPSELG-SLTKLVILDLGRNNLKGKLPRSLGNLTSLKSLGFTDNNIE 199
Query: 210 GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLP 269
G +P+ L +L L ++ N+F G PP+IYNLS+LE L+L G+ GSL D G LP
Sbjct: 200 GEVPDELARLSQMVGLGLSMNKFFGVFPPAIYNLSALEDLFLFGSGFSGSLKPDFGNLLP 259
Query: 270 KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWXXXXXXXX 329
+ + EN+ G IP + SN S L +N N+ +G + NF ++ +L +
Sbjct: 260 NIRELNLGENDLVGAIPTTLSNISTLQKFGINKNMMTGGIYPNFGKVPSLQYLDLSENPL 319
Query: 330 XXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP 389
DL+FI LTNC+ L L + R GG LP SIAN+ST + +N+ N G+IP
Sbjct: 320 GSYTFGDLEFIDSLTNCTHLQLLSVGYTRLGGALPTSIANMSTELISLNLIGNHFFGSIP 379
Query: 390 SGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXXXXXEGSIPFSLGNXXXXXXX 449
IGNL+ L + N LTG +P +GK G IP +GN
Sbjct: 380 QDIGNLIGLQRLQLGKNMLTGPLPTSLGKLLRLGLLSLYSNRMSGEIPSFIGNLTQLEIL 439
Query: 450 XXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTXXXXXXXXXXXXXXXX 509
+N +G +P SLG C +L L + NKL G +PK+I I T
Sbjct: 440 YLSNNSFEGIVPPSLGKCSHMLDLRIGYNKLNGTIPKEIMQIPTLVNLSMEGNSLSGSLP 499
Query: 510 XXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPXXXXXXXXXXX 569
++G+LQNLV+L + N+ SG +P TL C ++E L L NSF G IP
Sbjct: 500 N-DIGSLQNLVKLSLENNKFSGHLPQTLGNCLAMEQLFLQGNSFDGAIPNIRGLMGVRRV 558
Query: 570 XXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGL 629
N+LSG IP+Y N S LEYLN+S N+F GKVP+KG F N T + + GN LCGG+
Sbjct: 559 DLSN-NDLSGSIPEYFANFSKLEYLNLSINNFTGKVPSKGNFQNSTIVFVFGNKNLCGGI 617
Query: 630 YELQLPSCGSKG---SRKSTVALFKVVIPVTISCLILL----GCFIVVYARRRRFVHKSS 682
+L+L C ++ K + L KV I V+I +LL ++ + R+RR +++
Sbjct: 618 KDLKLKPCLAQEPPVETKHSSHLKKVAILVSIGIALLLLLVIASMVLCWFRKRRKNQQTN 677
Query: 683 --VTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT 740
V S +E +SY +L AT FS+SNM+G GSFG V++ +L +VAVKVLN+
Sbjct: 678 NLVPSKLEIFHEKISYGDLRNATNGFSSSNMVGSGSFGTVFKALLPTESKIVAVKVLNMQ 737
Query: 741 RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS 800
R+GA KSF+AECE+L++ RHRNL+K++T C+S D G +F+AL+YEY+ NGS++ WLH
Sbjct: 738 RRGAMKSFMAECESLKDTRHRNLVKLLTACASTDFQGNEFRALIYEYLPNGSVDMWLHPE 797
Query: 801 NDQH---DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857
+ L+L++RL+I ID+A ++YLH HC PI H DLKPSNVLL+ D+ AHV
Sbjct: 798 EVEEIRRPPRTLTLLERLNIVIDVASVLDYLHVHCHEPIAHCDLKPSNVLLEDDLTAHVS 857
Query: 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
DFGLA+ L + SS G++GT+GY APEYGMG + S+ GDVYSFG+LLLEMF
Sbjct: 858 DFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVLLLEMFT 917
Query: 918 RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLL-LEVRTNNSKNPCGDGRGGIEECL 976
KRPTD +F LT+H + ALP++V EI D +L + +R ECL
Sbjct: 918 GKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGFRT----------AECL 967
Query: 977 VAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012
V+ +G+ C E P +R L V +L + RE F
Sbjct: 968 TLVLEVGLRCCEEYPTNR-LATSEVAKELISIRERF 1002
|
|
| TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1903 (674.9 bits), Expect = 1.6e-196, P = 1.6e-196
Identities = 417/1011 (41%), Positives = 580/1011 (57%)
Query: 13 LVCCFNLLLHSYAFAGVPSNETDRLALLAIKSQLHDPL-GVTSSWNNSINLCQWTGVTCG 71
L+ FN L+ A+ G ++E+DR ALL IKSQ+ + S+WNNS LC W V CG
Sbjct: 5 LLLAFNALMQLEAY-GF-TDESDRQALLEIKSQVSESKRDALSAWNNSFPLCSWKWVRCG 62
Query: 72 HRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLA 131
+H+RVT+L L +GG++SP +GNLSFL +DL++N+F G IP E+G L RL L +
Sbjct: 63 RKHKRVTRLDLGGLQLGGVISPSIGNLSFLIYLDLSNNSFGGTIPQEMGNLFRLKYLAVG 122
Query: 132 NNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPAS 191
N G+IP +LS CS L+ NNL + + +G + +L L + N L G+ P
Sbjct: 123 FNYLEGEIPASLSNCSRLLYLDLFSNNLGDGVPSELG-SLRKLLYLYLGLNDLKGKFPVF 181
Query: 192 IGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYL 251
I NL+ L V+N+ N L G IP+ + L L + N FSG PP+ YNLSSLE LYL
Sbjct: 182 IRNLTSLIVLNLGYNHLEGEIPDDIAMLSQMVSLTLTMNNFSGVFPPAFYNLSSLENLYL 241
Query: 252 RGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPI 311
GN G+L D G LP + + N +G IP + +N S L M + N +G +
Sbjct: 242 LGNGFSGNLKPDFGNLLPNIHELSLHGNFLTGAIPTTLANISTLEMFGIGKNRMTGSISP 301
Query: 312 NFSRLQNLSWXXXXXXXXXXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLS 371
NF +L+NL + DL F+ LTNCS L L + NR GG LP SI N+S
Sbjct: 302 NFGKLENLHYLELANNSLGSYSFGDLAFLDALTNCSHLHGLSVSYNRLGGALPTSIVNMS 361
Query: 372 TTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXXXX 431
T +N+ N I G+IP IGNL+ L + N LTG +P +G
Sbjct: 362 TELTVLNLKGNLIYGSIPHDIGNLIGLQSLLLADNLLTGPLPTSLGNLVGLGELILFSNR 421
Query: 432 XEGSIPFSLGNXXXXXXXXXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNI 491
G IP +GN +N +G +P SLG+C +L L + NKL G +PK+I I
Sbjct: 422 FSGEIPSFIGNLTQLVKLYLSNNSFEGIVPPSLGDCSHMLDLQIGYNKLNGTIPKEIMQI 481
Query: 492 TTXXXXXXXXXXXXXXXXXXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYN 551
T ++G LQNLVEL + N +SG +P TL C S+E + L N
Sbjct: 482 PTLVHLNMESNSLSGSLPN-DIGRLQNLVELLLGNNNLSGHLPQTLGKCLSMEVIYLQEN 540
Query: 552 SFRGGIPXXXXXXXXXXXXXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVF 611
F G IP NNLSG I +Y EN S LEYLN+S N+FEG+VPT+G+F
Sbjct: 541 HFDGTIPDIKGLMGVKNVDLSN-NNLSGSISEYFENFSKLEYLNLSDNNFEGRVPTEGIF 599
Query: 612 SNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKST---VALFKVVIPVTISCLILLGCFI 668
N T +S+ GN LCG + EL+L C ++ T L KV I V++ +LL FI
Sbjct: 600 QNATLVSVFGNKNLCGSIKELKLKPCIAQAPPVETRHPSLLKKVAIGVSVGIALLLLLFI 659
Query: 669 VVYA--RRRRFVHKSSVTSP--MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGI 724
V + ++R+ K + ++P +E +SY +L AT FS+SN++G GSFG V++ +
Sbjct: 660 VSLSWFKKRKNNQKINNSAPFTLEIFHEKLSYGDLRNATDGFSSSNIVGSGSFGTVFKAL 719
Query: 725 LGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784
L +VAVKVLN+ R+GA KSF+AECE+L++IRHRNL+K++T C+SID G +F+AL+
Sbjct: 720 LQTENKIVAVKVLNMQRRGAMKSFMAECESLKDIRHRNLVKLLTACASIDFQGNEFRALI 779
Query: 785 YEYMQNGSLEEWLHHSNDQ--HDVC-DLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDL 841
YE+M NGSL++WLH + H L+L++RL+IAID+A ++YLH HC PI H DL
Sbjct: 780 YEFMPNGSLDKWLHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDL 839
Query: 842 KPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASM 901
KPSN+LLD D+ AHV DFGLA+ L + SS G++GT+GY APEYGMG + S+
Sbjct: 840 KPSNILLDDDLTAHVSDFGLARLLLKFDQESFFNQLSSAGVRGTIGYAAPEYGMGGQPSI 899
Query: 902 AGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNS 961
GDVYSFG+L+LEMF KRPT+ +F T++ + ALP+RV++I D +L +S
Sbjct: 900 HGDVYSFGVLVLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSIL------HS 953
Query: 962 KNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012
G + ECL ++ +G+ C ESP++R L +L + RE F
Sbjct: 954 GLRVGFP---VLECLKGILDVGLRCCEESPLNR-LATSEAAKELISIRERF 1000
|
|
| TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1885 (668.6 bits), Expect = 1.3e-194, P = 1.3e-194
Identities = 425/1014 (41%), Positives = 574/1014 (56%)
Query: 19 LLLHSYAFAGVP-SNETDRLALLAIKSQL--HDPLGVTSSWNNSINLCQWTGVTCGHRHQ 75
LLL FA SNETD ALL KSQ+ ++ V +SWN+S C W GVTCG R +
Sbjct: 14 LLLQVCIFAQARFSNETDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGRRRE 73
Query: 76 RVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSF 135
RV L L + G++SP +GNLSFLRL++LADN+F IP +VGRL RL L ++ N
Sbjct: 74 RVISLNLGGFKLTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLL 133
Query: 136 SGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNL 195
G+IP++LS CS L N+L + + +G + +L L ++ N+LTG PAS+GNL
Sbjct: 134 EGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELG-SLSKLAILDLSKNNLTGNFPASLGNL 192
Query: 196 SVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNR 255
+ L+ ++ N++ G IP+ + +L + IA N FSG PP++YN+SSLE L L N
Sbjct: 193 TSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSFSGGFPPALYNISSLESLSLADNS 252
Query: 256 LIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSR 315
G+L D G LP L ++ N F+G IP + +N S+L D++ N SG +P++F +
Sbjct: 253 FSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLSGSIPLSFGK 312
Query: 316 LQNLSWXXXXXXXXXXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTV 375
L+NL W L+FI + NC++L L + NR GG LP SIANLSTT
Sbjct: 313 LRNLWWLGIRNNSLGNNSSSGLEFIGAVANCTQLEYLDVGYNRLGGELPASIANLSTTLT 372
Query: 376 QINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXXXXXEGS 435
+ +G+N ISGTIP IGNLV+L ++ N L+G +P GK G
Sbjct: 373 SLFLGQNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYSNAISGE 432
Query: 436 IPFSLGNXXXXXXXXXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTXX 495
IP GN SN G IP SLG CR LL L + N+L G +P++I I +
Sbjct: 433 IPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLA 492
Query: 496 XXXXXXXXXXXXXXXXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRG 555
EVG L+ LV L S N++SG++P + C S+E+L + NSF G
Sbjct: 493 YIDLSNNFLTGHFPE-EVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDG 551
Query: 556 GIPXXXXXXXXXXXXXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKT 615
IP NNLSG+IP+YL +L L LN+S N FEG+VPT GVF N T
Sbjct: 552 AIPDISRLVSLKNVDFSN-NNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGVFRNAT 610
Query: 616 RISLSGNGKLCGGLYELQLPSC---GSKGSRKSTVALFKVVIPVTISCLILLGCFIVV-- 670
+S+ GN +CGG+ E+QL C S RK KVV + I LL IV
Sbjct: 611 AVSVFGNTNICGGVREMQLKPCIVQASPRKRKPLSVRKKVVSGICIGIASLLLIIIVASL 670
Query: 671 -YARRRRFVHKSSVTSPMEQ----QF-PIVSYAELSKATGEFSTSNMIGQGSFGFVYRGI 724
+ +R+ + +S +P + F VSY EL AT FS++N+IG G+FG V++G+
Sbjct: 671 CWFMKRKKKNNASDGNPSDSTTLGMFHEKVSYEELHSATSRFSSTNLIGSGNFGNVFKGL 730
Query: 725 LGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784
LG LVAVKVLNL + GA KSF+AECE + IRHRNL+K+IT+CSS+DS G DF+ALV
Sbjct: 731 LGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVKLITVCSSLDSEGNDFRALV 790
Query: 785 YEYMQNGSLEEWLHHSNDQHDVCD----LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGD 840
YE+M GSL+ WL D V D L+ ++L+IAID+A A+EYLH HC P+ H D
Sbjct: 791 YEFMPKGSLDMWLQ-LEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCD 849
Query: 841 LKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEAS 900
+KPSN+LLD D+ AHV DFGLA+ LY + SS G++GT+GY APEYGMG + S
Sbjct: 850 IKPSNILLDDDLTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPS 909
Query: 901 MAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNN 960
+ GDVYSFGILLLEMF K+PTD F +H + +L T++
Sbjct: 910 IQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKS--------------ILSGCTSS 955
Query: 961 SKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFLS 1014
G I+E L V+ +G+ CS E P DR + V +L + R F S
Sbjct: 956 G------GSNAIDEGLRLVLQVGIKCSEEYPRDR-MRTDEAVRELISIRSKFFS 1002
|
|
| UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)] | Back alignment and assigned GO terms |
|---|
Score = 1847 (655.2 bits), Expect = 1.4e-190, P = 1.4e-190
Identities = 414/988 (41%), Positives = 576/988 (58%)
Query: 35 DRLALLAIKSQLHDPLGVT-SSWNNSIN--LCQWTGVTCGHRHQR----VTKLYLRNQSI 87
D LALL+ KS L G + +SWN S + C W GV CG R +R V KL LR+ ++
Sbjct: 32 DELALLSFKSSLLYQGGQSLASWNTSGHGQHCTWVGVVCGRRRRRHPHRVVKLLLRSSNL 91
Query: 88 GGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCS 147
GI+SP +GNLSFLR +DL DN G IP E+ RLSRL L L++NS G IP + C+
Sbjct: 92 SGIISPSLGNLSFLRELDLGDNYLSGEIPPELSRLSRLQLLELSDNSIQGSIPAAIGACT 151
Query: 148 NLINF-LAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEEN 206
L + L+H N L G I IG + L L + N L+G++P+++GNL+ L+ ++ N
Sbjct: 152 KLTSLDLSH-NQLRGMIPREIGASLKHLSNLYLYKNGLSGEIPSALGNLTSLQEFDLSFN 210
Query: 207 RLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGL 266
RLSG IP++LGQL + +N+ N SG +P SI+NLSSL +R N+L G +P +
Sbjct: 211 RLSGAIPSSLGQLSSLLTMNLGQNNLSGMIPNSIWNLSSLRAFSVRENKLGGMIPTNAFK 270
Query: 267 TLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWXXXXX 326
TL L + N F G IP S +N S+L ++ + NLFSG + F RL+NL+
Sbjct: 271 TLHLLEVIDMGTNRFHGKIPASVANASHLTVIQIYGNLFSGIITSGFGRLRNLTELYLWR 330
Query: 327 XXXXXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISG 386
D FI+ LTNCSKL L L N GGVLP+S +NLST+ + + N+I+G
Sbjct: 331 NLFQTREQDDWGFISDLTNCSKLQTLNLGENNLGGVLPNSFSNLSTSLSFLALELNKITG 390
Query: 387 TIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXXXXXEGSIPFSLGNXXXX 446
+IP IGNL+ L + N G++P +G+ GSIP ++GN
Sbjct: 391 SIPKDIGNLIGLQHLYLCNNNFRGSLPSSLGRLKNLGILLAYENNLSGSIPLAIGNLTEL 450
Query: 447 XXXXXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTXXXXXXXXXXXXX 506
+N G IP +L N +LLSL +S N L+G +P ++FNI T
Sbjct: 451 NILLLGTNKFSGWIPYTLSNLTNLLSLGLSTNNLSGPIPSELFNIQTLSIMINVSKNNLE 510
Query: 507 XXXXXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPXXXXXXXX 566
E+G+L+NLVE N++SG+IP TL C L YL L N G IP
Sbjct: 511 GSIPQEIGHLKNLVEFHAESNRLSGKIPNTLGDCQLLRYLYLQNNLLSGSIPSALGQLKG 570
Query: 567 XXXXXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLC 626
NNLSGQIP L +++ L LN+S N F G+VPT G F+ + IS+ GN KLC
Sbjct: 571 LETLDLSSNNLSGQIPTSLADITMLHSLNLSFNSFVGEVPTIGAFAAASGISIQGNAKLC 630
Query: 627 GGLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSP 686
GG+ +L LP C + + + + + + IL ++++ +R S TS
Sbjct: 631 GGIPDLHLPRCCPLLENRKHFPVLPISVSLAAALAILSSLYLLITWHKRTKKGAPSRTS- 689
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
M+ P+VSY++L KAT F+ +N++G GSFG VY+G L VAVKVL L A K
Sbjct: 690 MKGH-PLVSYSQLVKATDGFAPTNLLGSGSFGSVYKGKLNIQDH-VAVKVLKLENPKALK 747
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-HSNDQHD 805
SF AECEALRN+RHRNL+KI+TICSSID+ G DFKA+VY++M NGSLE+W+H +NDQ D
Sbjct: 748 SFTAECEALRNMRHRNLVKIVTICSSIDNRGNDFKAIVYDFMPNGSLEDWIHPETNDQAD 807
Query: 806 VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
L+L +R+ I +D+A A++YLH H P++H D+K SNVLLD DMVAHVGDFGLA+ L
Sbjct: 808 QRHLNLHRRVTILLDVACALDYLHRHGPEPVVHCDIKSSNVLLDSDMVAHVGDFGLARIL 867
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
++ +SS+G GT+GY APEYG+G AS GD+YS+GIL+LE+ KRPTDS
Sbjct: 868 VD-GTSLIQQSTSSMGFIGTIGYAAPEYGVGLIASTHGDIYSYGILVLEIVTGKRPTDST 926
Query: 926 FNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRT--NNSKN-PCGDGRGGIEECLVAVITI 982
F L + ++ L RV ++VD L+L+ N++ N PC I EC+V ++ +
Sbjct: 927 FRPDLGLRQYVELGLHGRVTDVVDTKLILDSENWLNSTNNSPCRR----ITECIVWLLRL 982
Query: 983 GVLCSMESPIDRTLEMRNVVAKLCAARE 1010
G+ CS E P RT +++ +L A ++
Sbjct: 983 GLSCSQELPSSRT-PTGDIIDELNAIKQ 1009
|
|
| UNIPROTKB|O24435 O24435 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)] | Back alignment and assigned GO terms |
|---|
Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
Identities = 292/719 (40%), Positives = 405/719 (56%)
Query: 106 LADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAA 165
L +N G I +G LS L TL L++N SGKIP LS S L + + N+L G+I A
Sbjct: 85 LRSSNLAGIISPSLGNLSFLRTLQLSDNHLSGKIPQELSRLSRLQQLVLNFNSLSGEIPA 144
Query: 166 NIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYL 225
+G N L L + +N L+G +P+S+G L+ L + + EN LSG IP++ GQLR +L
Sbjct: 145 ALG-NLTSLSVLELTNNTLSGAIPSSLGKLTGLTDLALAENTLSGSIPSSFGQLRRLSFL 203
Query: 226 NIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPI 285
++A N SG +P I+N+SSL + + N+L G+LP + LP L + N F G I
Sbjct: 204 SLAFNNLSGAIPDPIWNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYNQFHGRI 263
Query: 286 PNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWXXXXXXXXXXXXXXDLDFITPLTN 345
P S N SN+ + + LN FSG VP R++NL D F+T LTN
Sbjct: 264 PASIGNASNISIFTIGLNSFSGVVPPEIGRMRNLQRLELPETLSEAEETNDWKFMTALTN 323
Query: 346 CSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDL 405
CS L + L G +FGGVLP S++NLS++ V +++ N+ISG++P IGNLVNL +
Sbjct: 324 CSNLQEVELGGCKFGGVLPDSVSNLSSSLVSLSIRDNKISGSLPRDIGNLVNLQYLSLAN 383
Query: 406 NQLTGTIPHEIGKXXXXXXXXXXXXXXEGSIPFSLGNXXXXXXXXXQSNYLQGNIPSSLG 465
N LTG++P K GS+P ++GN Q N G IPS+LG
Sbjct: 384 NSLTGSLPSSFSKLKNLRRLTVDNNKLIGSLPLTIGNLTQLTNMEVQFNAFGGTIPSTLG 443
Query: 466 NCRSLLSLNVSQNKLTGALPKQIFNITTXXXXXXXXXXXXXXXXXXEVGNLQNLVELDIS 525
N L +N+ N G +P +IF+I E+G L+N+VE
Sbjct: 444 NLTKLFQINLGHNNFIGQIPIEIFSIPALSEILDVSHNNLEGSIPKEIGKLKNIVEFHAD 503
Query: 526 RNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPXXXXXXXXXXXXXXXXNNLSGQIPKYL 585
N++SGE P+T+ C L++L L N G IP NNLSGQIP L
Sbjct: 504 SNKLSGENPSTIGECQLLQHLFLQNNFLNGSIPIALTQLKGLDTLDLSGNNLSGQIPMSL 563
Query: 586 ENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCG--SKGSR 643
++ L LN+S N F G+VPT GVF+N + I + GN +CGG+ EL LP+C S+ +
Sbjct: 564 GDMPLLHSLNLSFNSFHGEVPTNGVFANASEIYIQGNAHICGGIPELHLPTCSLKSRKKK 623
Query: 644 KSTVALFKVVIPV--TISCLILLGCFIVVYARRRRFVHKSSVTSPMEQQFPIVSYAELSK 701
K + L VVI + T++ LL + + RR++ V T+ M Q P+++Y +L K
Sbjct: 624 KHQILLLVVVICLVSTLAVFSLLYMLLTCHKRRKKEV---PATTSM-QGHPMITYKQLVK 679
Query: 702 ATGEFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRN 757
AT FS+S+++G GSFG VY+G GE LVAV+VL L A KSF AECE LRN
Sbjct: 680 ATDGFSSSHLLGSGSFGSVYKGEFDSQDGEITSLVAVRVLKLETPKALKSFTAECETLRN 739
Query: 758 IRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-HSNDQHDVCDLSLIQRL 815
RHRNL+KI+TICSSID+ G DFKA+VY++M NGSLE+WLH +NDQ + L+L QR+
Sbjct: 740 TRHRNLVKIVTICSSIDNRGNDFKAIVYDFMPNGSLEDWLHPETNDQAEQRHLTLHQRV 798
|
|
| TAIR|locus:2005540 HAE "HAESA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1038 (370.5 bits), Expect = 3.6e-120, Sum P(2) = 3.6e-120
Identities = 312/972 (32%), Positives = 466/972 (47%)
Query: 13 LVCCFNLLLHSYAFAGVPSNETDRLALLAIKSQLHDPLGVTSSW--NNSINLCQWTGVTC 70
L C LL S + S D L K L DP SSW NN + C+W GV+C
Sbjct: 2 LYCLILLLCLSSTYLPSLSLNQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSC 61
Query: 71 GHRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIP-HEVGRLSRLDTLM 129
V + L + + G + +L L + L +N+ G++ + L +L
Sbjct: 62 DAT-SNVVSVDLSSFMLVGPFPSILCHLPSLHSLSLYNNSINGSLSADDFDTCHNLISLD 120
Query: 130 LANNSFSGKIPTNLS-GCSNLINFLA-HGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQ 187
L+ N G IP +L NL FL GNNL I ++ G + +LE L++A N L+G
Sbjct: 121 LSENLLVGSIPKSLPFNLPNL-KFLEISGNNLSDTIPSSFG-EFRKLESLNLAGNFLSGT 178
Query: 188 LPASIGNLSVLKVINVEENRLS-GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSL 246
+PAS+GN++ LK + + N S +IP+ LG L L +AG G +PPS+ L+SL
Sbjct: 179 IPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLVGPIPPSLSRLTSL 238
Query: 247 ELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFS 306
L L N+L GS+P I L + + N+FSG +P S N + L D ++N +
Sbjct: 239 VNLDLTFNQLTGSIPSWI-TQLKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLT 297
Query: 307 GKVPINFSRLQNLSWXXXXXXXXXXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHS 366
GK+P N + L NL + +T L L L+ NR GVLP
Sbjct: 298 GKIPDNLNLL-NLE------SLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLPSQ 350
Query: 367 IANLSTTTVQ-INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXX 425
+ + + +Q +++ N+ SG IP+ + L + N +G I + +GK
Sbjct: 351 LG--ANSPLQYVDLSYNRFSGEIPANVCGEGKLEYLILIDNSFSGEISNNLGKCKSLTRV 408
Query: 426 XXXXXXXEGSIPFSLGNXXXXXXXXXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALP 485
G IP N G+IP ++ ++L +L +S+N+ +G++P
Sbjct: 409 RLSNNKLSGQIPHGFWGLPRLSLLELSDNSFTGSIPKTIIGAKNLSNLRISKNRFSGSIP 468
Query: 486 KQIFNITTXXXXXXXXXXXXXXXXXXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEY 545
+I ++ V L+ L LD+S+NQ+SGEIP L +L
Sbjct: 469 NEIGSLNGIIEISGAENDFSGEIPESLV-KLKQLSRLDLSKNQLSGEIPRELRGWKNLNE 527
Query: 546 LNLSYNSFRGGIPXXXXXXXXXXXXXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKV 605
LNL+ N G IP N SG+IP L+NL L LN+S NH GK+
Sbjct: 528 LNLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNLK-LNVLNLSYNHLSGKI 586
Query: 606 PTKGVFSNKTRI-SLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILL 664
P +++NK GN LC L L C K +R + +++ + + ++
Sbjct: 587 PP--LYANKIYAHDFIGNPGLCVDLDGL----C-RKITRSKNIGYVWILLTIFLLAGLVF 639
Query: 665 GCFIVVY---ARRRRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVY 721
IV++ R+ R + S++ + + F + ++E A N+IG GS G VY
Sbjct: 640 VVGIVMFIAKCRKLRALKSSTLAASKWRSFHKLHFSEHEIADC-LDEKNVIGFGSSGKVY 698
Query: 722 RGILGEGGLLVAVKVLNLTRKGA---FKS-------FVAECEALRNIRHRNLIKIITICS 771
+ L GG +VAVK LN + KG + S F AE E L IRH++++++ CS
Sbjct: 699 KVEL-RGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCS 757
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
S G D K LVYEYM NGSL + LH D+ L +RL IA+D A + YLHH
Sbjct: 758 S----G-DCKLLVYEYMPNGSLADVLH--GDRKGGVVLGWPERLRIALDAAEGLSYLHHD 810
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
C PPI+H D+K SN+LLD D A V DFG+AK Q+ +TP + GI G+ GY+AP
Sbjct: 811 CVPPIVHRDVKSSNILLDSDYGAKVADFGIAK---VGQMSGSKTPEAMSGIAGSCGYIAP 867
Query: 892 EYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIE-IVDP 950
EY + D+YSFG++LLE+ K+PTDS D + ++ AL + +E ++DP
Sbjct: 868 EYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDK-DMAKWVCTALDKCGLEPVIDP 926
Query: 951 LLLLEVRTNNSK 962
L L+ + SK
Sbjct: 927 KLDLKFKEEISK 938
|
|
| TAIR|locus:2175703 AT5G39390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 851 (304.6 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 185/377 (49%), Positives = 238/377 (63%)
Query: 577 LSGQIPKYLENLSFLEYLNISSN--------HFEGKVPTKGVFSNKTRISLSGNGKLCGG 628
LSG I + NLSFL LN+ N FEG VPTKGVF N T +S+ GN LCGG
Sbjct: 85 LSGSISPSIGNLSFLRSLNLGDNSFQSNIPQEFEGSVPTKGVFQNGTTVSVFGNENLCGG 144
Query: 629 LYELQLPSCGSKGSRKSTVALF-KVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSPM 687
+ E+QL C +K +L KV + V ++ L L FI+V A F K+
Sbjct: 145 VIEMQLKPCIESPRQKKPFSLGEKVAVGVGVALLFL---FIIV-ASLSWFKKKNDK---- 196
Query: 688 EQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS 747
+SY EL AT FS+SN+IG G+F V++G+LG LVAVKVLNL + GA KS
Sbjct: 197 ------ISYEELYNATSGFSSSNLIGSGNFSDVFKGLLGLEEKLVAVKVLNLLKHGATKS 250
Query: 748 FVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH----HSNDQ 803
F+AECE+ + IRHRNL K+IT+CSS+DS G DF+ALVYE+M GSL+ WL S +
Sbjct: 251 FIAECESFKGIRHRNLAKLITVCSSLDSQGNDFRALVYEFMPKGSLDMWLQPEDLESANN 310
Query: 804 HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
H L+ ++++IAID+A A+EYLH +C P+ H D+KPSNVLLD D+ AHV DFGLA+
Sbjct: 311 HSR-SLTFAEKVNIAIDVASALEYLHVYCHDPVAHCDIKPSNVLLDDDLTAHVSDFGLAR 369
Query: 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
LY SS G++GT+GY APEYGMGS+ S+ GDVYSFG+LLLEMF K+PTD
Sbjct: 370 LLYNFDEKTFLNQFSSAGVRGTIGYAAPEYGMGSKPSIQGDVYSFGVLLLEMFTGKKPTD 429
Query: 924 SMFNDGLTIHEFAMKAL 940
+ F G +H + L
Sbjct: 430 NSFGGGYNLHGYTKSVL 446
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1011 (360.9 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 284/900 (31%), Positives = 424/900 (47%)
Query: 79 KLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGK 138
+L ++ G L +GNL+ L N+F GNIP E+G+ L L LA N SG+
Sbjct: 185 ELVAYTNNLTGPLPRSLGNLNKLTTFRAGQNDFSGNIPTEIGKCLNLKLLGLAQNFISGE 244
Query: 139 IPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVL 198
+P + L + N G I +IG N LE L++ N L G +P+ IGN+ L
Sbjct: 245 LPKEIGMLVKLQEVILWQNKFSGFIPKDIG-NLTSLETLALYGNSLVGPIPSEIGNMKSL 303
Query: 199 KVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIG 258
K + + +N+L+G IP LG+L ++ + N SG +P + +S L LLYL N+L G
Sbjct: 304 KKLYLYQNQLNGTIPKELGKLSKVMEIDFSENLLSGEIPVELSKISELRLLYLFQNKLTG 363
Query: 259 SLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQN 318
+P ++ L L ++ N+ +GPIP F N +++ L L N SG +P
Sbjct: 364 IIPNELS-KLRNLAKLDLSINSLTGPIPPGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSP 422
Query: 319 LSWXXXXXXXXXXXXXXDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQIN 378
L W FI +N LI L L NR G +P + + +Q+
Sbjct: 423 L-WVVDFSENQLSGKIPP--FICQQSN---LILLNLGSNRIFGNIPPGVLRCKSL-LQLR 475
Query: 379 MGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKXXXXXXXXXXXXXXEGSIPF 438
+ N+++G P+ + LVNL+ +D N+ +G +P EIG ++P
Sbjct: 476 VVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPEIGTCQKLQRLHLAANQFSSNLPN 535
Query: 439 SLGNXXXXXXXXXQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTXXXXX 498
+ SN L G IPS + NC+ L L++S+N G+LP ++ ++
Sbjct: 536 EISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILR 595
Query: 499 XXXXXXXXXXXXXEVGNLQNLVELDISRNQVSGEIPATLSACTSLEY-LNLSYNSFRGGI 557
+GNL +L EL + N SG IP L +SL+ +NLSYN F G I
Sbjct: 596 LSENRFSGNIPFT-IGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEI 654
Query: 558 PXXXXXXXXXXXXXXXXNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRI 617
P N+LSG+IP ENLS L N S N+ G++P +F N T
Sbjct: 655 PPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLT 714
Query: 618 SLSGNGKLCGGLYELQLPSCGS----KGSRKSTVALFKVVIPVT--ISCLILLGCFIVVY 671
S GN LCGG PS S + + +++I V+ I + LL IVV+
Sbjct: 715 SFLGNKGLCGGHLRSCDPSHSSWPHISSLKAGSARRGRIIIIVSSVIGGISLLLIAIVVH 774
Query: 672 ARRRR------FVH-KSSVTSPMEQQF-PIVSYA--ELSKATGEFSTSNMIGQGSFGFVY 721
R +VH K + F P + ++ +AT F S ++G+G+ G VY
Sbjct: 775 FLRNPVEPTAPYVHDKEPFFQESDIYFVPKERFTVKDILEATKGFHDSYIVGRGACGTVY 834
Query: 722 RGILGEGGLLVAVKVLNLTRKG-------AFKSFVAECEALRNIRHRNLIKIITICSSID 774
+ ++ G +AVK L R+G SF AE L IRHRN++++ + C
Sbjct: 835 KAVM-PSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYH-- 891
Query: 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQP 834
G + L+YEYM GSL E LH H + D R IA+ A + YLHH C+P
Sbjct: 892 -QGSNSNLLLYEYMSRGSLGELLH-GGKSHSM-DWPT--RFAIALGAAEGLAYLHHDCKP 946
Query: 835 PIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYG 894
IIH D+K +N+L+D + AHVGDFGLAK + D+ S + G+ GY+APEY
Sbjct: 947 RIIHRDIKSNNILIDENFEAHVGDFGLAKVI------DMPLSKSVSAVAGSYGYIAPEYA 1000
Query: 895 MGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI--EIVDPLL 952
+ + D+YSFG++LLE+ K P + G + + + + EI+DP L
Sbjct: 1001 YTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGG-DLATWTRNHIRDHSLTSEILDPYL 1059
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| C0LGP4 | Y3475_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.4549 | 0.9597 | 0.9683 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.01230100 | hypothetical protein (1022 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1019 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-130 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-43 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-40 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-40 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-40 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 7e-40 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-38 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-36 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 1e-34 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 1e-30 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 5e-29 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-28 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 9e-28 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 8e-27 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 8e-26 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-25 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 3e-25 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 8e-25 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-24 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-24 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-24 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 3e-24 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-23 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-23 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 1e-22 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-22 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-21 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 7e-21 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-20 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-20 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 3e-20 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 3e-20 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 6e-20 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-20 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 6e-20 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 7e-20 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 2e-19 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-19 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 3e-19 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-19 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-19 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 3e-19 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-19 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 5e-19 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 8e-19 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-18 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-18 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-18 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-18 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-18 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 3e-18 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 8e-18 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-17 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 2e-17 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 3e-17 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-17 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-17 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 5e-17 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 5e-17 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 5e-17 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 9e-17 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 9e-17 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-16 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 2e-16 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 2e-16 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 3e-16 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 1e-15 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 1e-15 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-15 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-15 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 2e-15 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-15 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-15 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-15 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-15 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 3e-15 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-15 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 6e-15 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 6e-15 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 7e-15 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 9e-15 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-14 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-14 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-14 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 2e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-14 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 5e-14 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-14 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 8e-14 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 8e-14 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 9e-14 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 1e-13 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-13 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 1e-13 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 1e-13 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 1e-13 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-13 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 1e-13 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 1e-13 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-13 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 2e-13 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 3e-13 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-13 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-13 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 3e-13 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 4e-13 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-13 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 6e-13 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 8e-13 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 9e-13 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-12 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-12 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-12 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-12 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-12 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 3e-12 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 3e-12 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-12 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 4e-12 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 6e-12 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 6e-12 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 7e-12 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 8e-12 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 8e-12 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 9e-12 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 9e-12 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-11 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 1e-11 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-11 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-11 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 2e-11 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-11 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 2e-11 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-11 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 2e-11 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-11 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-11 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 2e-11 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 3e-11 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 3e-11 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 3e-11 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 3e-11 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 3e-11 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 4e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-11 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 5e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-11 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 6e-11 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 6e-11 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 7e-11 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 8e-11 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 8e-11 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 9e-11 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 9e-11 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 1e-10 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 1e-10 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-10 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 1e-10 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 1e-10 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 1e-10 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 1e-10 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-10 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-10 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-10 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 2e-10 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 2e-10 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 2e-10 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-10 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-10 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 4e-10 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 4e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-10 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-10 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 5e-10 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 6e-10 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 6e-10 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-10 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 6e-10 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 7e-10 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 7e-10 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 7e-10 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 7e-10 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 8e-10 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-10 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 9e-10 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-09 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-09 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 1e-09 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 1e-09 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 1e-09 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-09 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 2e-09 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-09 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-09 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 2e-09 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 3e-09 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 3e-09 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 3e-09 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 4e-09 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 4e-09 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 4e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-09 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 5e-09 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-09 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 6e-09 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 6e-09 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 6e-09 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 6e-09 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 8e-09 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 8e-09 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 8e-09 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 9e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-08 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-08 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 1e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-08 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 2e-08 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 2e-08 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-08 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 2e-08 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 2e-08 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-08 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 2e-08 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 3e-08 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 3e-08 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 3e-08 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 3e-08 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 3e-08 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 3e-08 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 3e-08 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 3e-08 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 4e-08 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 4e-08 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 4e-08 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 5e-08 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 5e-08 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 5e-08 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 5e-08 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 7e-08 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 7e-08 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 8e-08 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-07 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 1e-07 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 1e-07 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 1e-07 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 1e-07 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 1e-07 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 2e-07 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-07 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-07 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-07 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 3e-07 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-07 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-07 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 3e-07 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-07 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 4e-07 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 4e-07 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 5e-07 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 5e-07 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 6e-07 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 8e-07 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 9e-07 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-06 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 1e-06 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 1e-06 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 1e-06 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 1e-06 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 1e-06 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-06 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 2e-06 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 2e-06 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 3e-06 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 3e-06 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 3e-06 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 3e-06 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 3e-06 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 3e-06 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 3e-06 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 4e-06 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 4e-06 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 4e-06 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 4e-06 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 5e-06 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 5e-06 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 5e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 5e-06 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 6e-06 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 6e-06 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 7e-06 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 7e-06 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 7e-06 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 8e-06 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 1e-05 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 2e-05 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 2e-05 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 3e-05 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 3e-05 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 5e-05 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 6e-05 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 6e-05 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 7e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 9e-05 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 9e-05 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-04 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 1e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-04 | |
| COG2334 | 331 | COG2334, COG2334, Putative homoserine kinase type | 5e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 6e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 6e-04 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 6e-04 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 6e-04 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 7e-04 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 0.001 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 0.001 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 0.002 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 0.003 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 0.003 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 0.004 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 416 bits (1072), Expect = e-130
Identities = 301/910 (33%), Positives = 463/910 (50%), Gaps = 63/910 (6%)
Query: 39 LLAIKSQLHDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGILSPHVGNL 98
LL+ KS ++DPL S+WN+S ++C W G+TC + RV + L ++I G +S + L
Sbjct: 34 LLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRL 92
Query: 99 SFLRLIDLADNNFYGNIPHEVGRLS-RLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGN 157
+++ I+L++N G IP ++ S L L L+NN+F+G IP G + L N
Sbjct: 93 PYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP---RGSIPNLETLDLSN 149
Query: 158 N-LVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTL 216
N L G+I +IG + L+ L + N L G++P S+ NL+ L+ + + N+L G+IP L
Sbjct: 150 NMLSGEIPNDIGS-FSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPREL 208
Query: 217 GQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVI 276
GQ+++ ++ + N SG +P I L+SL L L N L G +P +G L L +
Sbjct: 209 GQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKNLQYLFL 267
Query: 277 AENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAAND 336
+N SGPIP S + L+ LDL+ N SG++P +LQNL L L NN
Sbjct: 268 YQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP-- 325
Query: 337 LDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI---G 393
LT+ +L L L+ N+F G +P ++ + TV +++ N ++G IP G+ G
Sbjct: 326 ----VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTV-LDLSTNNLTGEIPEGLCSSG 380
Query: 394 NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQS 453
NL L F N L G IP +G +L+ + L N G +P L L+ L++ +
Sbjct: 381 NLFKLILFS---NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISN 437
Query: 454 NYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV 513
N LQG I S + SL L++++NK G LP F L LDLS N + ++P ++
Sbjct: 438 NNLQGRINSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLE-NLDLSRNQFSGAVPRKL 495
Query: 514 GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLS 573
G+L L++L +S N++SGEIP LS+C L L+LS+N G IP S S + + LDLS
Sbjct: 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLS 555
Query: 574 SNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQ 633
N LSG+IPK L N+ L +NIS NH G +P+ G F +++GN LCGG
Sbjct: 556 QNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG 615
Query: 634 LPSCGSKGSRKSTVALFKVVIPVTISCLILLGCFIVVYARRRRFVHKSSVTSP---MEQQ 690
LP C K RK+ F + + ++ L F V+ R R + V + E Q
Sbjct: 616 LPPC--KRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQ 673
Query: 691 FPIVSYAELSKATGEFSTS----NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
F S S + +S N+I +G G Y+G + G+ VK +N
Sbjct: 674 F-FDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEIN-DVNSIPS 731
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDV 806
S +A+ + ++H N++K+I +C S L++EY++ +L E L
Sbjct: 732 SEIAD---MGKLQHPNIVKLIGLCRSEKG-----AYLIHEYIEGKNLSEVLR-------- 775
Query: 807 CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
+LS +R IAI IA A+ +LH C P ++ G+L P +++D H+ L L
Sbjct: 776 -NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLC 833
Query: 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF 926
T D + SS YVAPE + + D+Y FG++L+E+ K P D+ F
Sbjct: 834 T----DTKCFISS-------AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF 882
Query: 927 NDGLTIHEFA 936
+I E+A
Sbjct: 883 GVHGSIVEWA 892
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 5e-43
Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+G FG VY + G VA+K++ + + E E L+ + H N++K+ +
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+ LV EY + GSL++ L + + LS + L I + I +EYLH
Sbjct: 61 EDENHLY-----LVMEYCEGGSLKDLL-----KENEGKLSEDEILRILLQILEGLEYLHS 110
Query: 831 HCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ IIH DLKP N+LLD D + DFGL+K L S I GT Y+
Sbjct: 111 N---GIIHRDLKPENILLDSDNGKVKLADFGLSKLL-------TSDKSLLKTIVGTPAYM 160
Query: 890 APEYGMG-SEASMAGDVYSFGILLLEM-----FIR--------KRPT 922
APE +G S D++S G++L E+ IR KRP+
Sbjct: 161 APEVLLGKGYYSEKSDIWSLGVILYELPELKDLIRKMLQKDPEKRPS 207
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 1e-40
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G+FG VY+G L VAVK L + + F+ E ++ + H N++++
Sbjct: 7 LGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRL 66
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ +C+ + +V EYM G L ++L ++ L+L L +A+ IA +E
Sbjct: 67 LGVCTQGEPL-----YIVTEYMPGGDLLDFLRKHGEK-----LTLKDLLQMALQIAKGME 116
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YL +H DL N L+ ++V + DFGL++ +Y DD G K +
Sbjct: 117 YLESK---NFVHRDLAARNCLVTENLVVKISDFGLSRDIYE---DDYYRKRG--GGKLPI 168
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
++APE G + S DV+SFG+LL E+F
Sbjct: 169 KWMAPESLKDGKFTSKS---DVWSFGVLLWEIF 198
|
Length = 258 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 2e-40
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 711 MIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIK 765
+G+G+FG VY+G L + VAVK L + F+ E +R + H N++K
Sbjct: 6 KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ +C+ + +V EYM G L ++L ++ +LSL L A+ IA +
Sbjct: 66 LLGVCTEEEPL-----MIVMEYMPGGDLLDYLR----KNRPKELSLSDLLSFALQIARGM 116
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
EYL IH DL N L+ ++V + DFGL++ LY V+ K
Sbjct: 117 EYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGG------KLP 167
Query: 886 VGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ ++APE G + S DV+SFG+LL E+F
Sbjct: 168 IRWMAPESLKEGKFTSKS---DVWSFGVLLWEIF 198
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 4e-40
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 711 MIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIK 765
+G+G+FG VY+G L G+ + VAVK L + + F+ E +R + H N++K
Sbjct: 6 KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ +C+ + +V EYM+ G L +L + + LSL L A+ IA +
Sbjct: 66 LLGVCTEEEPL-----YIVMEYMEGGDLLSYLRKNRPK-----LSLSDLLSFALQIARGM 115
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
EYL IH DL N L+ ++V + DFGL++ LY G K
Sbjct: 116 EYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKR------GGKLP 166
Query: 886 VGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ ++APE G + S DV+SFG+LL E+F
Sbjct: 167 IRWMAPESLKEGKFTSKS---DVWSFGVLLWEIF 197
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 7e-40
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+GSFG VY + G LVA+KV+ + K + + E + L+ ++H N++++ +
Sbjct: 7 LGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVF 66
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
D LV EY + G L + L LS + I A+EYLH
Sbjct: 67 EDEDKL-----YLVMEYCEGGDLFDLLKKRGR------LSEDEARFYLRQILSALEYLHS 115
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
I+H DLKP N+LLD D + DFGLA+ L + GT Y+A
Sbjct: 116 KG---IVHRDLKPENILLDEDGHVKLADFGLARQL--------DPGEKLTTFVGTPEYMA 164
Query: 891 PEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
PE +G A D++S G++L E+ K P
Sbjct: 165 PEVLLGKGYGKAVDIWSLGVILYELLTGKPP 195
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 3e-38
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 32/220 (14%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIK 765
+G+G+FG VY+G L VAVK L + K F+ E ++ + H N+++
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD---LSLIQRLHIAIDIA 822
++ +C+ + LV EYM+ G L ++L S + LSL L AI IA
Sbjct: 61 LLGVCTEEEPL-----YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIA 115
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG- 881
+EYL +H DL N L+ D+V + DFGL++ +Y DD + G
Sbjct: 116 KGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY----DDDYYRKKTGGK 168
Query: 882 --IKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
I+ ++APE G+ + S DV+SFG+LL E+F
Sbjct: 169 LPIR----WMAPESLKDGIFTSKS---DVWSFGVLLWEIF 201
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 4e-36
Identities = 73/213 (34%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIKIITI 769
+G GSFG VY+ G +VAVK+L + ++ E LR + H N++++I
Sbjct: 7 LGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDA 66
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
D D LV EY + G L ++L + LS + IA+ I +EYLH
Sbjct: 67 F--EDK---DHLYLVMEYCEGGDLFDYLS----RGGP--LSEDEAKKIALQILRGLEYLH 115
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ IIH DLKP N+LLD + V + DFGLAK L + SS GT Y+
Sbjct: 116 SN---GIIHRDLKPENILLDENGVVKIADFGLAKKLLK-------SSSSLTTFVGTPWYM 165
Query: 890 APE-YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
APE G+ DV+S G++L E+ K P
Sbjct: 166 APEVLLGGNGYGPKVDVWSLGVILYELLTGKPP 198
|
Length = 260 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 1e-34
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHRN 762
E++ ++G+GSFG VY + + G L+AVK + L+ ++ E L +++H N
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+++ + + ++ + EY+ GSL L + +I++ I
Sbjct: 61 IVRYYGSERDEEKNTLN---IFLEYVSGGSLSSLLK----KFGKLPEPVIRKY--TRQIL 111
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ YLH + I+H D+K +N+L+D D V + DFG AK ++ D+ET + +
Sbjct: 112 EGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAK-----RLGDIETGEGTGSV 163
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+GT ++APE G E A D++S G ++EM K P
Sbjct: 164 RGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPP 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 1e-30
Identities = 86/299 (28%), Positives = 127/299 (42%), Gaps = 48/299 (16%)
Query: 709 SNMIGQGSFGFVYRG---ILGEG-GLLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNL 763
+G+G FG V LG+ G VAVK LN + + +S F E E LR + H N+
Sbjct: 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+K +C + G L+ EY+ +GSL ++L DQ ++L + L + I
Sbjct: 69 VKYKGVC---EKPGGRSLRLIMEYLPSGSLRDYLQRHRDQ-----INLKRLLLFSSQICK 120
Query: 824 AIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETP 876
++YL IH DL N+L++ + + + DFGLAK L Y + E+P
Sbjct: 121 GMDYLGSQRY----IHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPG-ESP 175
Query: 877 SSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936
+ + APE S+ S A DV+SFG+ L E+F P+ S EF
Sbjct: 176 ---------IFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS------PPAEFL 220
Query: 937 MKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT 995
+ IV LLE+ + P C V + LC P DR
Sbjct: 221 RMIGIAQGQMIV--TRLLELLKEGERLPRPPS------CPDEVYDLMKLCWEAEPQDRP 271
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
F IG+G FG VY+ G VA+KV+ L K + + E + L+ +H N++
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
K S + + +V E+ GSL++ L +N ++ ++ ++
Sbjct: 61 KY--YGSYLKKDEL---WIVMEFCSGGSLKDLLKSTNQTLTESQIA-----YVCKELLKG 110
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYLH + IIH D+K +N+LL D + DFGL+ + + + G
Sbjct: 111 LEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSA--------QLSDTKARNTMVG 159
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T ++APE G D++S GI +E+ K P
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPP 196
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
EF+ +G G FG V+ G L + + VA+K+L + F E +AL+ +RH++LI
Sbjct: 7 EFTLERKLGSGYFGEVWEG-LWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI 65
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+ +CS + ++ E M+ GSL +L Q L + + +A +A
Sbjct: 66 SLFAVCSVGEPV-----YIITELMEKGSLLAFLRSPEGQ----VLPVASLIDMACQVAEG 116
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ YL IH DL N+L+ D+V V DFGLA+ + +DV S K
Sbjct: 117 MAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK----EDVYLSSDK---KI 166
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
+ APE S DV+SFGILL EMF + P M N
Sbjct: 167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN 210
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 9e-28
Identities = 73/241 (30%), Positives = 112/241 (46%), Gaps = 26/241 (10%)
Query: 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKI 766
N IG G+FG VY + + G L+AVK + + K E + L ++H NL+K
Sbjct: 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK- 63
Query: 767 ITICSSIDSHGVDFKALVY-EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ H K ++ EY G+LEE L H + D +I+ + + +
Sbjct: 64 ---YYGVEVH--REKVYIFMEYCSGGTLEELLEHGR----ILDEHVIRVY--TLQLLEGL 112
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI-GIKG 884
YLH H I+H D+KP+N+ LDH+ V +GDFG A L ++ T + + G
Sbjct: 113 AYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKL----KNNTTTMGEEVQSLAG 165
Query: 885 TVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941
T Y+APE G G A D++S G ++LEM KRP + N+ + P
Sbjct: 166 TPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKP 225
Query: 942 Q 942
Sbjct: 226 P 226
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 8e-27
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+G FG V G G VAVK L A ++F+AE + +RH NL++++ +
Sbjct: 14 IGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVV- 69
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ + + +V EYM GSL ++L ++L Q+L A+D+ +EYL
Sbjct: 70 -LQGNPL---YIVTEYMAKGSLVDYLRSRGRAV----ITLAQQLGFALDVCEGMEYLE-- 119
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
+ +H DL NVL+ D+VA V DFGLAK E K V + AP
Sbjct: 120 -EKNFVHRDLAARNVLVSEDLVAKVSDFGLAK----------EASQGQDSGKLPVKWTAP 168
Query: 892 EYGMGSEASMAGDVYSFGILLLEMF 916
E + S DV+SFGILL E++
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIY 193
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 8e-26
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 51/226 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF-KSFVAECEALRNIRHRNLIKIITIC 770
+GQGS G VY+ G + A+K +++ F K + E + LR+ ++K
Sbjct: 9 LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVK----- 63
Query: 771 SSIDSHGVDFK----ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH---------I 817
+G +K ++V EYM GSL L++++ I
Sbjct: 64 ----CYGAFYKEGEISIVLEYMDGGSLA---------------DLLKKVGKIPEPVLAYI 104
Query: 818 AIDIAYAIEYLH--HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
A I ++YLH H IIH D+KPSN+L++ + DFG++K L
Sbjct: 105 ARQILKGLDYLHTKRH----IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC--- 157
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
++ + GTV Y++PE G S A D++S G+ LLE + K P
Sbjct: 158 -NTFV---GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFP 199
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 33/222 (14%)
Query: 712 IGQGSFGFVYRG-----ILGEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIK 765
+G+G+FG V+ G LVAVK L A K F E E L N +H N++K
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH---------DVCDLSLIQRLH 816
+C+ D +V+EYM++G L ++L S+ + +L+L Q L
Sbjct: 73 FYGVCTEGDP-----PIMVFEYMEHGDLNKFLR-SHGPDAAFLKSPDSPMGELTLSQLLQ 126
Query: 817 IAIDIAYAIEYL--HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
IA+ IA + YL H +H DL N L+ +D+V +GDFG+++ +YT V
Sbjct: 127 IAVQIASGMVYLASQH-----FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVG 181
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ + I+ ++ PE M + + DV+SFG++L E+F
Sbjct: 182 G-HTMLPIR----WMPPESIMYRKFTTESDVWSFGVVLWEIF 218
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 77/267 (28%), Positives = 111/267 (41%), Gaps = 38/267 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEAL-RNIRHRNLIKII 767
IG+GSF V E A+K+L+ L ++ K E E L R H +IK+
Sbjct: 9 IGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLY 68
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ D + F V EY NG L +++ L A +I A+EY
Sbjct: 69 --YTFQDEENLYF---VLEYAPNGELLQYIRK------YGSLDEKCTRFYAAEILLALEY 117
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT----CQVDDVETPSSSIGIK 883
LH IIH DLKP N+LLD DM + DFG AK L T S K
Sbjct: 118 LHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEK 174
Query: 884 ---------GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH- 933
GT YV+PE A + D+++ G ++ +M K P N+ LT
Sbjct: 175 NRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS-NEYLTFQK 233
Query: 934 ----EFAM-KALPQRVIEIVDPLLLLE 955
E++ P ++++ LL+L+
Sbjct: 234 ILKLEYSFPPNFPPDAKDLIEKLLVLD 260
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-25
Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 25/220 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRN 762
+ ++IG+G+FG VY+G+ E G VA+K ++L + + A KS + E + L+N++H N
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSND-QHDVCDLSLIQRLHIAIDI 821
++K I SI++ D ++ EY +NGSL + + + + + Q L
Sbjct: 61 IVKYIG---SIETS--DSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQ----- 110
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+ YLH + +IH D+K +N+L D V + DFG+A +++DV +S
Sbjct: 111 --GLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVAT-----KLNDVSKDDAS-- 158
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ GT ++APE S AS A D++S G ++E+ P
Sbjct: 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPP 198
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G L VAVK L + G K F+AE + ++ +RH LI++ +
Sbjct: 14 LGAGQFGEVWEG-LWNNTTPVAVKTL---KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
C+ + +V E M+ GSL E+L + L L Q + +A +A + YL
Sbjct: 70 CTLEEP-----IYIVTELMKYGSLLEYLQGGAGRA----LKLPQLIDMAAQVASGMAYLE 120
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
IH DL NVL+ + + V DFGLA+ + +D+ G K + +
Sbjct: 121 AQ---NYIHRDLAARNVLVGENNICKVADFGLARVI----KEDIYEARE--GAKFPIKWT 171
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFN 927
APE + + S+ DV+SFGILL E+ R P M N
Sbjct: 172 APEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK--SFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G G VAVK L + G +F+ E + ++ +RH L+++ +
Sbjct: 14 LGAGQFGEVWMG-TWNGTTKVAVKTL---KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
CS + +V EYM GSL ++L + L L Q + +A IA + YL
Sbjct: 70 CSEEEP-----IYIVTEYMSKGSLLDFLKSGEGK----KLRLPQLVDMAAQIAEGMAYLE 120
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
IH DL N+L+ ++V + DFGLA+ + DD T G K + +
Sbjct: 121 ---SRNYIHRDLAARNILVGENLVCKIADFGLARLIE----DDEYTARE--GAKFPIKWT 171
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFN 927
APE ++ DV+SFGILL E+ R P M N
Sbjct: 172 APEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 106 bits (264), Expect = 2e-24
Identities = 76/221 (34%), Positives = 104/221 (47%), Gaps = 23/221 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRH-RNLIKII 767
+G+GSFG VY + LVA+KVL + + F+ E + L ++ H N++K+
Sbjct: 8 LGEGSFGEVYLARDRK---LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
S LV EY+ GSLE+ L LS + L I I A+EY
Sbjct: 65 DFFQDEGSL-----YLVMEYVDGGSLEDLLKKI---GRKGPLSESEALFILAQILSALEY 116
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
LH IIH D+KP N+LLD D V + DFGLAK L P+ GT
Sbjct: 117 LHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG-STSSIPALPSTSVGTP 172
Query: 887 GYVAPEYGMGSE---ASMAGDVYSFGILLLEMFIRKRPTDS 924
GY+APE +G AS + D++S GI L E+ P +
Sbjct: 173 GYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213
|
Length = 384 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 3e-24
Identities = 68/217 (31%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G+GSFG V + G L A+KVL + ++ + + E L I H ++K
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK--L 58
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN----DQHDVCDLSLIQRLHIAIDIAYA 824
+ + LV EY G L + H S + R + A +I A
Sbjct: 59 HYAFQTEEKL---YLVLEYAPGGEL--FSHLSKEGRFSEERA-------RFYAA-EIVLA 105
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYLH II+ DLKP N+LLD D + DFGLAK L + ++ G
Sbjct: 106 LEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELS----SEGSRTNTFC---G 155
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T Y+APE +G A D +S G+LL EM K P
Sbjct: 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP 192
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 19/211 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+ + + +G G +G VY G+ + L VAVK L + F+ E ++ I+H NL+
Sbjct: 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 65
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+++ +C+ F ++ E+M G+L ++L N Q +++ + L++A I+ A
Sbjct: 66 QLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSA 116
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYL IH DL N L+ + + V DFGL++ + +T ++ G K
Sbjct: 117 MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------DTYTAHAGAKF 167
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ + APE ++ S+ DV++FG+LL E+
Sbjct: 168 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198
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Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 3e-23
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 34/213 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK-SFVAECEALRNIRHRNLIKIITIC 770
IG+G+FG VY+G+L +G VAVK T K F+ E E L+ H N++K+I +C
Sbjct: 3 IGKGNFGDVYKGVL-KGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+ + +V E + GSL +L ++ L++ + L +++D A +EYL
Sbjct: 62 --VQKQPI---YIVMELVPGGSLLTFLRKKKNR-----LTVKKLLQMSLDAAAGMEYLES 111
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS----IGIKGTV 886
IH DL N L+ + V + DFG+++ + + S I IK T
Sbjct: 112 KN---CIHRDLAARNCLVGENNVLKISDFGMSR-----EEEGGIYTVSDGLKQIPIKWT- 162
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE YG + S DV+S+GILL E F
Sbjct: 163 ---APEALNYGRYTSES---DVWSYGILLWETF 189
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Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 1e-22
Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 25/207 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G G + VA+K++ R+GA F+ E + + + H NL+++ +
Sbjct: 12 LGSGQFGVVHLGKW-RGKIDVAIKMI---REGAMSEDDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
C+ F +V EYM NG L +L + L L + D+ A+EYL
Sbjct: 68 CTK---QRPIF--IVTEYMANGCLLNYLRERKGK-----LGTEWLLDMCSDVCEAMEYLE 117
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ IH DL N L+ D V V DFGLA+++ +DD T SS G K V +
Sbjct: 118 SNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYV----LDDQYT--SSQGTKFPVKWA 168
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMF 916
PE S S DV+SFG+L+ E+F
Sbjct: 169 PPEVFDYSRFSSKSDVWSFGVLMWEVF 195
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Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 1e-22
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 29/226 (12%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNLIK 765
+IG G FG V RG L G+ + VA+K L + F+ E + H N+I+
Sbjct: 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ + + ++ EYM+NGSL+++L ++ + ++ Q + + IA +
Sbjct: 70 LEGVVTKSRPV-----MIITEYMENGSLDKFLRENDGK-----FTVGQLVGMLRGIASGM 119
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
+YL +H DL N+L++ ++V V DFGL++ L +D E ++ G K
Sbjct: 120 KYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRL-----EDSEATYTTKGGKIP 171
Query: 886 VGYVAPE---YGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSMFN 927
+ + APE Y + AS DV+SFGI++ E M +RP M N
Sbjct: 172 IRWTAPEAIAYRKFTSAS---DVWSFGIVMWEVMSYGERPYWDMSN 214
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 94.0 bits (233), Expect = 4e-21
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 26/219 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+GQG FG V+ G G VA+K L + G ++F+ E + ++ +RH L+++ +
Sbjct: 14 LGQGCFGEVWMGTW-NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
S + +V EYM GSL ++L ++ L L Q + +A IA + Y+
Sbjct: 70 VSEEPIY------IVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVE 119
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ +H DL+ +N+L+ ++V V DFGLA+ ++D E + G K + +
Sbjct: 120 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL-----IEDNEYTARQ-GAKFPIKWT 170
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFN 927
APE + ++ DV+SFGILL E+ + R P M N
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 209
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 7e-21
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 41/221 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITI 769
IG+G++G VY+ + G LVA+K + + + G + + E + L+ +RH N++++ I
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66
Query: 770 CSSIDSHGVDFKALVYEYMQ---NGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+S + +V+EYM G L S + + Q + ++
Sbjct: 67 VTSKGKGSI---YMVFEYMDHDLTG-----LLDSPEVK----FTESQIKCYMKQLLEGLQ 114
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-------YTCQVDDVETPSSS 879
YLH + I+H D+K SN+L+++D V + DFGLA+ YT +V
Sbjct: 115 YLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRV--------- 162
Query: 880 IGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
I T+ Y PE +G+ D++S G +L E+F+ K
Sbjct: 163 I----TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199
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Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 91.8 bits (229), Expect = 2e-20
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 69/281 (24%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT------RKGAFKSFVAECEALRNIRHRNL 763
IG+GSFG VY G L +K ++L+ R+ A E + L+ + H N+
Sbjct: 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALN----EVKILKKLNHPNI 61
Query: 764 IKIITICSSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
IK +S + L V EY G L + + + Q L + +
Sbjct: 62 IKYY------ESF-EEKGKLCIVMEYADGGDLSQKIKKQKKEGKP--FPEEQILDWFVQL 112
Query: 822 AYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
A++YLH I+H D+KP N+ L + + +GDFG++K L V+ + +
Sbjct: 113 CLALKYLHSRK----ILHRDIKPQNIFLTSNGLVKLGDFGISKVL----SSTVDLAKTVV 164
Query: 881 GIKGTVGYVAPE------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934
GT Y++PE Y + S D++S G +L E+ K P F +G + E
Sbjct: 165 ---GTPYYLSPELCQNKPY---NYKS---DIWSLGCVLYELCTLKHP----F-EGENLLE 210
Query: 935 FAMKAL-----------PQRVIEIVDPLLLLEVRTNNSKNP 964
A+K L + +V LL K+P
Sbjct: 211 LALKILKGQYPPIPSQYSSELRNLVSSLL--------QKDP 243
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 91.5 bits (227), Expect = 2e-20
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS--FVAECEALRNIRHRNLIKIITI 769
+G G FG V G G VA+K++ ++G+ F+ E + + + H L+++ +
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMKLSHEKLVQLYGV 67
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
C+ +V EYM NG L +L + Q L + D+ + YL
Sbjct: 68 CTKQRP-----IYIVTEYMSNGCLLNYLREHGKR-----FQPSQLLEMCKDVCEGMAYLE 117
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
IH DL N L+D V DFGL++++ +DD T SS+G K V +
Sbjct: 118 SK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYV----LDDEYT--SSVGSKFPVRWS 168
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMF-IRKRPTDSMFNDGLTIH 933
PE + S+ S DV++FG+L+ E++ + K P + N
Sbjct: 169 PPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK 213
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 91.9 bits (229), Expect = 3e-20
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
IG+G+ G VY+ G VA+K + L ++ + + E +++ +H N I
Sbjct: 26 KIGEGASGEVYKATDRATGKEVAIKKMRLRKQNK-ELIINEILIMKDCKHPN------IV 78
Query: 771 SSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DIAYAI 825
DS+ V L V EYM GSL + + + + + IA ++ +
Sbjct: 79 DYYDSYLVG-DELWVVMEYMDGGSLTDII-------TQNFVRMNEP-QIAYVCREVLQGL 129
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
EYLH +IH D+K N+LL D + DFG A L + S + GT
Sbjct: 130 EYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-------SKRNSVVGT 179
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
++APE + D++S GI+ +EM
Sbjct: 180 PYWMAPEVIKRKDYGPKVDIWSLGIMCIEM 209
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 3e-20
Identities = 76/245 (31%), Positives = 121/245 (49%), Gaps = 34/245 (13%)
Query: 704 GEFSTSNMIGQGSFGFVYRGIL---GEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNI 758
+ +IG G FG V+RGIL G + VA+K L T K + F++E +
Sbjct: 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR-QDFLSEASIMGQF 63
Query: 759 RHRNLIKIITICSSIDSHGVDFK--ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
H N+I++ + + FK ++ EYM+NG+L+++L HD + S Q +
Sbjct: 64 SHHNIIRLEGVVTK-------FKPAMIITEYMENGALDKYLR----DHD-GEFSSYQLVG 111
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
+ IA ++YL +H DL N+L++ ++ V DFGL++ L DD E
Sbjct: 112 MLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE----DDPEGT 164
Query: 877 SSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSMFNDGLTIHEF 935
++ G K + + APE + + A DV+SFGI++ E M +RP M N HE
Sbjct: 165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HE- 218
Query: 936 AMKAL 940
MKA+
Sbjct: 219 VMKAI 223
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 6e-20
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 710 NMIGQGSFGFVYRGIL------GEGGLLVAVKVLNLTRKGA----FKSFVAECEALRNIR 759
N +G G+FG VY G G G + VAVK L RKGA K F+ E + N
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTL---RKGATDQEKKEFLKEAHLMSNFN 57
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD-LSLIQRLHIA 818
H N++K++ +C + + ++ E M+ G L +L + + L+L + L I
Sbjct: 58 HPNIVKLLGVCLLNEP-----QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDIC 112
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLL-----DHDMVAHVGDFGLAKFLYTCQVDDV 873
+D+A YL Q IH DL N L+ D D V +GDFGLA+ +Y
Sbjct: 113 LDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRK 169
Query: 874 ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
E V ++APE + + + DV+SFG+L+ E+
Sbjct: 170 EGEG-----LLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEI 206
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 90.4 bits (224), Expect = 6e-20
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 32/229 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRN 762
E + IG G FG V+ G E VA+K + R+GA + F+ E + + + H
Sbjct: 5 ELTLVQEIGSGQFGLVWLGYWLEKRK-VAIKTI---REGAMSEEDFIEEAQVMMKLSHPK 60
Query: 763 LIKIITIC---SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
L+++ +C S I LV+E+M++G L ++L + S L + +
Sbjct: 61 LVQLYGVCTERSPI--------CLVFEFMEHGCLSDYLRAQRGK-----FSQETLLGMCL 107
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
D+ + YL +IH DL N L+ + V V DFG+ +F+ +DD T SS
Sbjct: 108 DVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFV----LDDQYT--SS 158
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
G K V + +PE S+ S DV+SFG+L+ E+F K P ++ N
Sbjct: 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN 207
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 6e-20
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 26/219 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+GQG FG V+ G G VA+K L + G ++F+ E + ++ +RH L+ + +
Sbjct: 14 LGQGCFGEVWMGTW-NGTTKVAIKTL---KPGTMMPEAFLQEAQIMKKLRHDKLVPLYAV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
S + +V E+M GSL ++L + ++ L L Q + +A IA + Y+
Sbjct: 70 VSEEPIY------IVTEFMGKGSLLDFLKEGDGKY----LKLPQLVDMAAQIADGMAYIE 119
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ IH DL+ +N+L+ ++V + DFGLA+ ++D E + G K + +
Sbjct: 120 ---RMNYIHRDLRAANILVGDNLVCKIADFGLARL-----IEDNEYTARQ-GAKFPIKWT 170
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFN 927
APE + ++ DV+SFGILL E+ + R P M N
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN 209
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.6 bits (226), Expect = 7e-20
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITI 769
+G+G++G VY+ + G +VA+K + L + G + + E L+ ++H N++K++ +
Sbjct: 7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDV 66
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
H LV+EY + L D+ LS I + + Y H
Sbjct: 67 I-----HTERKLYLVFEYC-----DMDLKKYLDKRPG-PLSPNLIKSIMYQLLRGLAYCH 115
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPSSSIGIK 883
H I+H DLKP N+L++ D V + DFGLA+ YT +V T
Sbjct: 116 SHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYT---HEVVTL------- 162
Query: 884 GTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
Y APE +GS+ S A D++S G + EM I +P
Sbjct: 163 ---WYRAPEILLGSKHYSTAVDIWSVGCIFAEM-ITGKP 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 88.9 bits (220), Expect = 2e-19
Identities = 69/213 (32%), Positives = 103/213 (48%), Gaps = 27/213 (12%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGE-GGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNL 763
E IG+G FG V +LG+ G VAVK + ++F+AE + +RH NL
Sbjct: 7 ELKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNL 61
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
++++ + ++ G + +V EYM GSL ++L V + L ++D+
Sbjct: 62 VQLLGVI--VEEKGGLY--IVTEYMAKGSLVDYLRSRG--RSVLGGDCL--LKFSLDVCE 113
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
A+EYL + +H DL NVL+ D VA V DFGL K E S+ K
Sbjct: 114 AMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK----------EASSTQDTGK 160
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
V + APE + S DV+SFGILL E++
Sbjct: 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIK 765
+GQGSFG VY G+ GE VA+K +N F+ E ++ ++++
Sbjct: 14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73
Query: 766 IITICSSIDSHGVDFKALV-YEYMQNGSLEEWLHHSNDQHDVCDL----SLIQRLHIAID 820
++ + S+ LV E M G L+ +L + + +L + + +A +
Sbjct: 74 LLGVVSTGQ------PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAE 127
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
IA + YL +H DL N ++ D+ +GDFG+ + +Y ET
Sbjct: 128 IADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY-------ETDYYRK 177
Query: 881 GIKGT--VGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
G KG V ++APE + DV+SFG++L EM
Sbjct: 178 GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM 214
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 88.5 bits (219), Expect = 3e-19
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G G VAVK L + G +SF+ E + ++ +RH L+++ +
Sbjct: 14 LGNGQFGEVWMGTW-NGNTKVAVKTL---KPGTMSPESFLEEAQIMKKLRHDKLVQLYAV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
S + +V EYM GSL ++L + L L + +A +A + Y+
Sbjct: 70 VSEEPIY------IVTEYMSKGSLLDFLKDGEGRA----LKLPNLVDMAAQVAAGMAYIE 119
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ IH DL+ +N+L+ +V + DFGLA+ ++D E + G K + +
Sbjct: 120 ---RMNYIHRDLRSANILVGDGLVCKIADFGLARL-----IEDNEYTARQ-GAKFPIKWT 170
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFN 927
APE + ++ DV+SFGILL E+ + R P M N
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 88.9 bits (220), Expect = 3e-19
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 31/221 (14%)
Query: 712 IGQGSFGFVY----RGILGEGG-LLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G+FG V+ +L E +LVAVK L + A + F E E L ++H+++++
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-HSNDQHDVCD--------LSLIQRLHI 817
+C+ +V+EYM++G L +L H D + L+L Q L I
Sbjct: 73 YGVCTE-----GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAI 127
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A IA + YL +H DL N L+ +V +GDFG+++ +Y+ T
Sbjct: 128 ASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS-------TDY 177
Query: 878 SSIGIKGT--VGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+G + + ++ PE + + + D++SFG++L E+F
Sbjct: 178 YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIF 218
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 3e-19
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 712 IGQGSFGFVYRG-ILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
IG+G FG V +G G+ VAVK N+ ++F+ E + + H+NL++++ +
Sbjct: 14 IGEGEFGAVLQGEYTGQK---VAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGV- 67
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
I +G+ +V E M G+L +L +S+IQ L ++D+A +EYL
Sbjct: 68 --ILHNGL---YIVMELMSKGNLVNFLRTRGRAL----VSVIQLLQFSLDVAEGMEYLE- 117
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
++H DL N+L+ D VA V DFGLA+ V + +S + +K T A
Sbjct: 118 --SKKLVHRDLAARNILVSEDGVAKVSDFGLAR------VGSMGVDNSKLPVKWT----A 165
Query: 891 PEYGMGSEASMAGDVYSFGILLLEMF 916
PE + S DV+S+G+LL E+F
Sbjct: 166 PEALKHKKFSSKSDVWSYGVLLWEVF 191
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 88.4 bits (219), Expect = 3e-19
Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 36/230 (15%)
Query: 711 MIGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRKGAF-----KSFVAECEALRNIRHRN 762
+IG G FG V RG L G+ + VA+K L K + + F++E + H N
Sbjct: 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTL----KSGYTEKQRRDFLSEASIMGQFDHPN 66
Query: 763 LIKIITICSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
+I + GV K+ ++ E+M+NG+L+ +L ++ Q ++IQ + +
Sbjct: 67 IIHL---------EGVVTKSRPVMIITEFMENGALDSFLRQNDGQ-----FTVIQLVGML 112
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
IA ++YL + +H DL N+L++ ++V V DFGL++FL D T S
Sbjct: 113 RGIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT--S 167
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSMFN 927
S+G K + + APE + + A DV+S+GI++ E M +RP M N
Sbjct: 168 SLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 217
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 88.5 bits (219), Expect = 5e-19
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 34/223 (15%)
Query: 712 IGQGSFGFVYRGILGE--------GGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNL 763
+G+G+FG V+ L E +LVAVK L A K F E E L N++H ++
Sbjct: 13 LGEGAFGKVF---LAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 69
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-HSNDQHDVCD---------LSLIQ 813
+K +C D +V+EYM++G L ++L H D + D L L Q
Sbjct: 70 VKFYGVCGDGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 124
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
LHIA IA + YL +H DL N L+ +++ +GDFG+++ +Y+ V
Sbjct: 125 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 181
Query: 874 ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ + I+ ++ PE M + + DV+SFG++L E+F
Sbjct: 182 GG-HTMLPIR----WMPPESIMYRKFTTESDVWSFGVILWEIF 219
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 5e-19
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 33/248 (13%)
Query: 681 SSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT 740
SS +S S +K+ E N IG G+ G VY+ I G L A+KV+
Sbjct: 51 SSSSSSSSSSSASGSAPSAAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN 110
Query: 741 RKGAFKSFVA-ECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHH 799
+ + + E E LR++ H N++K C + H + + L+ E+M GSLE H
Sbjct: 111 HEDTVRRQICREIEILRDVNHPNVVK----CHDMFDHNGEIQVLL-EFMDGGSLEG--TH 163
Query: 800 SNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859
D+ + D+ A I I YLH I+H D+KPSN+L++ + DF
Sbjct: 164 IADEQFLADV--------ARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADF 212
Query: 860 GLAKFLYTCQVDDVETP-SSSIGIKGTVGYVAPE-----YGMGSEASMAGDVYSFGILLL 913
G+++ L Q D P +SS+ GT+ Y++PE G+ AGD++S G+ +L
Sbjct: 213 GVSRIL--AQTMD---PCNSSV---GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL 264
Query: 914 EMFIRKRP 921
E ++ + P
Sbjct: 265 EFYLGRFP 272
|
Length = 353 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 8e-19
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 35/225 (15%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTR----------KGAFKSFVAECEALRNIRH 760
+IG+G++G VY + G ++AVK + L K K+ +E E L+++ H
Sbjct: 8 LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67
Query: 761 RNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
N+++ + ++ + ++ EY+ GS+ L + + L++
Sbjct: 68 LNIVQYLGFETTEEYL-----SIFLEYVPGGSIGSCLR----TYGRFEEQLVR--FFTEQ 116
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+ + YLH I+H DLK N+L+D D + + DFG++K + DD+ ++
Sbjct: 117 VLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISK-----KSDDIYDNDQNM 168
Query: 881 GIKGTVGYVAPE----YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
++G+V ++APE Y G A + D++S G ++LEMF +RP
Sbjct: 169 SMQGSVFWMAPEVIHSYSQGYSAKV--DIWSLGCVVLEMFAGRRP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 87.3 bits (216), Expect = 1e-18
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 32/216 (14%)
Query: 712 IGQGSFGFV----YRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKI 766
+G+G FG V Y G VAVK L G E E LRN+ H N++K
Sbjct: 12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
IC+ +G+ L+ E++ +GSL+E+L + ++ ++L Q+L A+ I ++
Sbjct: 72 KGICTEDGGNGIK---LIMEFLPSGSLKEYLPRNKNK-----INLKQQLKYAVQICKGMD 123
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPSSSI 880
YL +H DL NVL++ + +GDFGL K + YT + DD+++P
Sbjct: 124 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVK-DDLDSP---- 175
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
V + APE + S+ +A DV+SFG+ L E+
Sbjct: 176 -----VFWYAPECLIQSKFYIASDVWSFGVTLYELL 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 1e-18
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
I +G++G V+ G + A+KV+ + RK + E + L + ++K+
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY- 59
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAIDIAYAIE 826
S + LV EY+ G L L + D+ + R++IA +I A+E
Sbjct: 60 -YSFQGKKNL---YLVMEYLPGGDLASLLENVGSLDED-------VARIYIA-EIVLALE 107
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF-LYTCQVDDVETPSSSIGIKGT 885
YLH + IIH DLKP N+L+D + + DFGL+K L Q++ + I GT
Sbjct: 108 YLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGT 164
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
Y+APE +G S D +S G +L E +
Sbjct: 165 PDYIAPEVILGQGHSKTVDWWSLGCILYEFLV 196
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 87.3 bits (216), Expect = 1e-18
Identities = 71/225 (31%), Positives = 99/225 (44%), Gaps = 36/225 (16%)
Query: 712 IGQGSFGFV----YRGILGEGGLLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNLIKI 766
+G+G FG V Y G +VAVK L S + E L+ + H N++K
Sbjct: 12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
CS G+ L+ EY+ GSL ++L L+L Q L A I +
Sbjct: 72 KGCCSEQGGKGL---QLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMA 121
Query: 827 YLH--HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF-----LYTCQVDDVETPSSS 879
YLH H+ IH DL NVLLD+D + +GDFGLAK Y +D ++P
Sbjct: 122 YLHSQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP--- 173
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
V + A E ++ S A DV+SFG+ L E+ S
Sbjct: 174 ------VFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITI 769
IG+G+ G V++ E G VA+K + L R G + E +AL+ +H ++K++
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLL-- 65
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
+ HG F LV EYM L E L L Q + + Y+H
Sbjct: 66 --DVFPHGSGF-VLVMEYMP-SDLSEVLRDEERP-----LPEAQVKSYMRMLLKGVAYMH 116
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-------FLYTCQVDDVETPSSSIGI 882
I+H DLKP+N+L+ D V + DFGLA+ LY+ QV
Sbjct: 117 ---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQV------------ 161
Query: 883 KGTVGYVAPEYGMGSEASMAG-DVYSFGILLLEMFIRKRP 921
T Y APE G+ G D+++ G + E+ + P
Sbjct: 162 -ATRWYRAPELLYGARKYDPGVDLWAVGCIFAEL-LNGSP 199
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 3e-18
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 711 MIGQGSFGFV----YRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G+FG V Y + G +VAVK L + + F E E L++++H N++K
Sbjct: 11 QLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKY 70
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+C S + LV EY+ GSL ++L ++ D L L A I +E
Sbjct: 71 KGVCYSAGRRNL---RLVMEYLPYGSLRDYLQKHRERLDHRKL-----LLYASQICKGME 122
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPSSSI 880
YL +H DL N+L++ + +GDFGL K L Y V P S
Sbjct: 123 YLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK-----VREPGES- 173
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ + APE S+ S+A DV+SFG++L E+F
Sbjct: 174 ----PIFWYAPESLTESKFSVASDVWSFGVVLYELF 205
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 3e-18
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 33/236 (13%)
Query: 698 ELSKATGEFSTSNMIGQGSFGFVYRG-ILGEGGLL----VAVKVLNLTRKGAFKS-FVAE 751
E+ + F +G+G+FG VY+G + G L VA+K L + + F E
Sbjct: 1 EIPLSAVRFLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQE 58
Query: 752 CEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL-HHS--------ND 802
E + +++H N++ ++ +C+ +++EY+ +G L E+L +S +
Sbjct: 59 AELMSDLQHPNIVCLLGVCTKEQPT-----CMLFEYLAHGDLHEFLVRNSPHSDVGAESG 113
Query: 803 QHDVCD-LSLIQRLHIAIDIAYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860
V L LHIAI IA +EYL HH +H DL N L+ + + DFG
Sbjct: 114 DETVKSSLDCSDFLHIAIQIAAGMEYLSSHH----FVHRDLAARNCLVGEGLTVKISDFG 169
Query: 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
L++ +Y+ D S S+ V ++ PE + + + D++SFG++L E+F
Sbjct: 170 LSRDIYSA--DYYRVQSKSL---LPVRWMPPEAILYGKFTTESDIWSFGVVLWEIF 220
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 8e-18
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 32/216 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
IG+GSFG V + G ++ K + N+T K + V+E LR ++H N+++
Sbjct: 8 IGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEK-QQLVSEVNILRELKHPNIVRYY- 65
Query: 769 ICSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+D +V EY + G L + + + + I R I + A
Sbjct: 66 ------DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWR--ILTQLLLA 117
Query: 825 IEYLHH--HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ H+ ++H DLKP+N+ LD + +GDFGLAK L S
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL----------GHDSSFA 167
Query: 883 KGTVG---YVAPEYGMGSEASMAGDVYSFGILLLEM 915
K VG Y++PE D++S G L+ E+
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYEL 203
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRN 762
F +IG+G+FG V + + A+K +N KG+ ++ + E L+ + H
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPF 61
Query: 763 LIKIITICSSI-DSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAI 819
L+ + S D + LV + + G L L + V + I
Sbjct: 62 LVNL---WYSFQDE---ENMYLVVDLLLGGDLRYHLSQKVKFSEEQV-------KFWIC- 107
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
+I A+EYLH IIH D+KP N+LLD H+ DF +A V + +
Sbjct: 108 EIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIAT--------KVTPDTLT 156
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT GY+APE S+A D +S G+ E KRP
Sbjct: 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRP 198
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 2e-17
Identities = 61/213 (28%), Positives = 87/213 (40%), Gaps = 39/213 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G GSFG V G A+K+L+ + + + + E L++IRH L+ +
Sbjct: 9 LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLY- 67
Query: 769 ICSSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
D L V EY+ G L L S A + A+E
Sbjct: 68 ------GSFQDDSNLYLVMEYVPGGELFSHLRKSGR------FPEPVARFYAAQVVLALE 115
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL----YTCQVDDVETPSSSIGI 882
YLH I++ DLKP N+LLD D + DFG AK + YT +
Sbjct: 116 YLHS-LD--IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYT--------------L 158
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
GT Y+APE + A D ++ GIL+ EM
Sbjct: 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEM 191
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-17
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 26/230 (11%)
Query: 712 IGQGSFGFV-----YRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G+FG V Y + +LVAVK L A K F E E L N++H +++K
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-HSNDQ------HDVCDLSLIQRLHIAI 819
+C D +V+EYM++G L ++L H D + +L+ Q LHIA
Sbjct: 73 YGVCVEGDP-----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ 127
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
IA + YL +H DL N L+ +++ +GDFG+++ +Y+ V +
Sbjct: 128 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG-HTM 183
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFND 928
+ I+ ++ PE M + + DV+S G++L E+F K+P + N+
Sbjct: 184 LPIR----WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 229
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 3e-17
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 31/227 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRN 762
+F IG+G++G VY+ + G LVA+K + L ++G + + E + LR + HRN
Sbjct: 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRN 67
Query: 763 LIKIITICSSIDSHGVDFKA------LVYEYMQN---GSLEEWLHHSNDQHDVCDLSLIQ 813
++ + I + +DFK LV+EYM + G LE L H ++ H + S ++
Sbjct: 68 IVNLKEIVTD-KQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDH-IK--SFMK 123
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
+L +E L++ + +H D+K SN+LL++ + DFGLA+ + +
Sbjct: 124 QL---------LEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNS----EE 170
Query: 874 ETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
P ++ I T+ Y PE +G E A DV+S G +L E+F +K
Sbjct: 171 SRPYTNKVI--TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 4e-17
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 77/306 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G G VA+K L ++G+ ++F+AE ++ ++H L+++
Sbjct: 14 LGAGQFGEVWMGYY-NGHTKVAIKSL---KQGSMSPEAFLAEANLMKQLQHPRLVRL--- 66
Query: 770 CSSIDSHGVDFKALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ V + +Y EYM+NGSL ++L L++ + + +A IA +
Sbjct: 67 ------YAVVTQEPIYIITEYMENGSLVDFLKTPEGI----KLTINKLIDMAAQIAEGMA 116
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL----YTCQVDDVETPSSSIGI 882
++ + IH DL+ +N+L+ + + DFGLA+ + YT + G
Sbjct: 117 FIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTARE----------GA 163
Query: 883 KGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFNDGLTIHEFAMK 938
K + + APE YG + S DV+SFGILL E+ R P M N
Sbjct: 164 KFPIKWTAPEAINYGTFTIKS---DVWSFGILLTEIVTYGRIPYPGMTN----------- 209
Query: 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDR-TLE 997
P+ VI+ ++ + P D C + + LC E P +R T E
Sbjct: 210 --PE-VIQNLE---------RGYRMPRPDN------CPEELYELMRLCWKEKPEERPTFE 251
Query: 998 -MRNVV 1002
+R+V+
Sbjct: 252 YLRSVL 257
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 83.3 bits (207), Expect = 5e-17
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
IG G++G V + G VA+K ++ K + E + LR++RH N+I ++ I
Sbjct: 8 IGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDI 67
Query: 770 CSSIDSHGVDFKAL--VYEYMQNGSLEEWLHHS---NDQHDVCDLSLIQRLHIAIDIAYA 824
DF + V E M+ L + + D H IQ + I
Sbjct: 68 --LRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDH-------IQ--YFLYQILRG 115
Query: 825 IEYLH--HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
++YLH + +IH DLKPSN+L++ + + DFGLA+ D +
Sbjct: 116 LKYLHSAN-----VIHRDLKPSNILVNSNCDLKICDFGLARG----VDPDEDEKG----- 161
Query: 883 KGTVGYV------APE-YGMGSEASMAGDVYSFGILLLEMFIRK 919
YV APE S + A D++S G + E+ RK
Sbjct: 162 -FLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK 204
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 5e-17
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 45/223 (20%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS------FVA--ECEALRNIRHRNL 763
+G+G++ VY+ E G +VA+K + + G K F A E + L+ ++H N+
Sbjct: 8 LGEGTYAVVYKARDKETGRIVAIKKI---KLGERKEAKDGINFTALREIKLLQELKHPNI 64
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
I ++ + LV+E+M+ LE+ + + L+ +
Sbjct: 65 IGLLDVFGH-----KSNINLVFEFME-TDLEKVIKDKS-----IVLTPADIKSYMLMTLR 113
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPS 877
+EYLH + I+H DLKP+N+L+ D V + DFGLA+ T QV
Sbjct: 114 GLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQV------- 163
Query: 878 SSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T Y APE G+ + D++S G + E+ +R
Sbjct: 164 ------VTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 5e-17
Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 30/226 (13%)
Query: 711 MIGQGSFGFVYRGIL---GEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIK 765
+IG G FG V G L G+ + VA+K L T K + F++E + H N+I
Sbjct: 11 VIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR-RDFLSEASIMGQFDHPNIIH 69
Query: 766 ---IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
++T + +V EYM+NGSL+ +L + Q ++IQ + + IA
Sbjct: 70 LEGVVTKSKPV--------MIVTEYMENGSLDAFLRKHDGQ-----FTVIQLVGMLRGIA 116
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
++YL +H DL N+L++ ++V V DFGL++ L DD E ++ G
Sbjct: 117 SGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE----DDPEAAYTTRGG 169
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSMFN 927
K + + APE + + A DV+S+GI++ E M +RP M N
Sbjct: 170 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 9e-17
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKIITIC 770
IG G+ VY I VA+K ++L + E +A+ H N++K
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK--YYT 66
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
S + + LV Y+ GSL + + S + D ++I + ++ +EYLH
Sbjct: 67 SFVVGDEL---WLVMPYLSGGSLLDIMKSSYPR-GGLDEAIIAT--VLKEVLKGLEYLHS 120
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
+ Q IH D+K N+LL D + DFG++ L T GT ++A
Sbjct: 121 NGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLAD---GGDRTRKVRKTFVGTPCWMA 174
Query: 891 PE-----YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
PE +G +A D++SFGI +E+ P
Sbjct: 175 PEVMEQVHGYDFKA----DIWSFGITAIELATGAAP 206
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 9e-17
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 29/260 (11%)
Query: 704 GEFSTSNMIGQGSFGFVYRGI---LGEGGLL-VAVKVL-NLTRKGAFKSFVAECEALRNI 758
E ++G G+FG VY+G+ GE + VA+KVL T A K + E + ++
Sbjct: 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV 66
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
H ++++++ IC S L+ + M G L +++ + D L L+
Sbjct: 67 DHPHVVRLLGICLS-SQV-----QLITQLMPLGCLLDYVRNHKDNIGSQYL-----LNWC 115
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ IA + YL ++H DL NVL+ + DFGLAK L VD+ E +
Sbjct: 116 VQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL---DVDEKEYHAE 169
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF-IRKRPTDSMFNDGLTIHEFAM 937
G K + ++A E + + DV+S+G+ + E+ +P + + + I +
Sbjct: 170 --GGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI--PAVEIPDLLE 225
Query: 938 KA--LPQRVIEIVDPLLLLE 955
K LPQ I +D ++L
Sbjct: 226 KGERLPQPPICTIDVYMVLV 245
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 32/179 (17%)
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
L L N L +P ++ L++L +++S N + G IP +L + TSLE L+LSYNSF G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 558 PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRI 617
P SL L S+++L+L+ N+LSG++P L G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAAL-----------------GGRLLHR-----ASF 520
Query: 618 SLSGNGKLCG--GLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILLGCFIVVYARR 674
+ + N LCG G L +CG S + + + V+++ L L+ C + + RR
Sbjct: 521 NFTDNAGLCGIPG-----LRACGPHLSVGAKIG---IAFGVSVAFLFLVICAMCWWKRR 571
|
Length = 623 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 69/218 (31%), Positives = 91/218 (41%), Gaps = 39/218 (17%)
Query: 712 IGQGSFGFVYRGILGEGG---LLVAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIK 765
+G GSFG V RG G + VAVK L L+ F+ E + ++ H NLI+
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIR 60
Query: 766 IITICSSIDSHGV--DFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH-IAIDI 821
+ +GV +V E GSL + L H LI L A+ I
Sbjct: 61 L---------YGVVLTHPLMMVTELAPLGSLLDRLRKDALGH-----FLISTLCDYAVQI 106
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A + YL IH DL N+LL D +GDFGL + L Q +D
Sbjct: 107 ANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALP--QNEDHYV--MEEH 159
Query: 882 IKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+K + APE S AS DV+ FG+ L EMF
Sbjct: 160 LKVPFAWCAPESLRTRTFSHAS---DVWMFGVTLWEMF 194
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKS----FVAECEALRNIRH 760
+ S+++ +G+FG ++ GIL + +V T K A + + E L + H
Sbjct: 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH 67
Query: 761 RNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIA 818
+N++ I+ +C + ++Y YM G+L+ +L + ++ LS Q +H+A
Sbjct: 68 QNILPILHVCIE----DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMA 123
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL----YTCQVDDVE 874
I IA + YLH +IH D+ N ++D ++ + D L++ L Y C D+
Sbjct: 124 IQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNEN 180
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
P V ++A E + E S A DV+SFG+LL E+
Sbjct: 181 RP---------VKWMALESLVNKEYSSASDVWSFGVLLWEL 212
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 3e-16
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 47/233 (20%)
Query: 712 IGQGSFGFVYR----GIL-GEGGLLVAVKVLNLTRKGAF----KSFVAECEALRNIRHRN 762
IGQG+FG V++ G+L E +VAVK+L ++ A F E + H N
Sbjct: 13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKML---KEEASADMQADFQREAALMAEFDHPN 69
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQH--------------DV 806
++K++ +C+ L++EYM G L E+L H + Q +
Sbjct: 70 IVKLLGVCAVGKP-----MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124
Query: 807 CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
LS ++L IA +A + YL + +H DL N L+ +MV + DFGL++ +Y
Sbjct: 125 LPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 181
Query: 867 T---CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ + + + +I I+ ++ PE + + DV+++G++L E+F
Sbjct: 182 SADYYKASE----NDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIF 226
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 1e-15
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVA---VKVLNLTRKGAFKSFVAECEALRNIR 759
G F IG+G F VY+ I G +VA V++ + A + + E + L+ +
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
H N+IK + S I+++ ++ +V E G L + H Q + I + +
Sbjct: 61 HPNVIKYLA--SFIENNELN---IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFV-- 113
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
+ A+E++H I+H D+KP+NV + V +GD GL +F + +T +++
Sbjct: 114 QLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS------KT-TAA 163
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ GT Y++PE + + D++S G LL EM + P
Sbjct: 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 1e-15
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGG---LLVAVKVLNLT--RKGAFKSFVAECEALRNIRH 760
++G+G FG V G L + L VAVK + L + F++E +++ H
Sbjct: 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH 60
Query: 761 RNLIKIITICSSIDSHGVDFKALV-YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
N++K+I +C S K +V +M++G L +L +S L L L +
Sbjct: 61 PNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMV 120
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV--ETPS 877
DIA +EYL + IH DL N +L DM V DFGL+K +Y+ D +
Sbjct: 121 DIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSKKIYS---GDYYRQGRI 174
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918
+ + +K ++A E + DV++FG+ + E+ R
Sbjct: 175 AKMPVK----WIAIESLADRVYTSKSDVWAFGVTMWEIATR 211
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 1e-15
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+GS+G VY+ I E G +VA+KV+ + + + E L+ ++K
Sbjct: 11 LGEGSYGSVYKAIHKETGQVVAIKVVPVE--EDLQEIIKEISILKQCDSPYIVKY----- 63
Query: 772 SIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DIAYA 824
+G FK +V EY GS+ +D + + +L + IA
Sbjct: 64 ----YGSYFKNTDLWIVMEYCGAGSV-------SDIMKITNKTLTEEE-IAAILYQTLKG 111
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYLH + IH D+K N+LL+ + A + DFG++ L +T + + G
Sbjct: 112 LEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQL-------TDTMAKRNTVIG 161
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF-AMKALPQR 943
T ++APE + D++S GI +EM K P + IH A+ +P +
Sbjct: 162 TPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPP---YSD----IHPMRAIFMIPNK 214
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 2e-15
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G+G FG V + G + A K L+ L ++ + + E + L + R
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSR-----FI 55
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ + D LV M G L+ +++ + + A I +E+L
Sbjct: 56 VSLAYAFETKDDLCLVMTLMNGGDLKYHIYN----VGEPGFPEARAIFYAAQIICGLEHL 111
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H Q I++ DLKP NVLLD + D GLA ++ + GT GY
Sbjct: 112 H---QRRIVYRDLKPENVLLDDHGNVRISDLGLA-----VELKGGKKIKGRA---GTPGY 160
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+APE G + D ++ G L EM + P
Sbjct: 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 33/222 (14%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V+ LV +K + +T+ + EC+ L+ + H N+I+
Sbjct: 7 VVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDER-LAAQNECQVLKLLSHPNIIEYY 65
Query: 768 TICSSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQR--LHIAIDIAY 823
++ D KAL V EY G+L E++ C+ L + LH + I
Sbjct: 66 ------ENFLED-KALMIVMEYAPGGTLAEYIQ------KRCNSLLDEDTILHFFVQILL 112
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
A+ ++H I+H DLK N+LLD H MV +GDFG++K L + S + +
Sbjct: 113 ALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKIL--------SSKSKAYTV 161
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
GT Y++PE G + D+++ G +L E+ KR ++
Sbjct: 162 VGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 712 IGQGSFGFVYRGILGE--GGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKII 767
+G G FG V+ LG+ + VA+K +N +GA + F+ E + + + H L+++
Sbjct: 12 LGSGQFGVVH---LGKWRAQIKVAIKAIN---EGAMSEEDFIEEAKVMMKLSHPKLVQLY 65
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+C+ + V E+M+NG L +L + LS L + D+ +EY
Sbjct: 66 GVCTQQKPLYI-----VTEFMENGCLLNYLRQRQGK-----LSKDMLLSMCQDVCEGMEY 115
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
L + IH DL N L+ V V DFG+ +++ +DD T SS G K V
Sbjct: 116 LE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYV----LDDEYT--SSSGAKFPVK 166
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
+ PE S+ S DV+SFG+L+ E+F K P + N
Sbjct: 167 WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN 207
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIR---H 760
+ IG+G++G VY+ G VA+K + L+ +G S + E L+ + H
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60
Query: 761 RNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
N+++++ +C + LV+E++ ++ L + L +
Sbjct: 61 PNIVRLLDVCHGPRTDRELKLTLVFEHV-----DQDLATYLSKCPKPGLPPETIKDLMRQ 115
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+ +++LH H I+H DLKP N+L+ D + DFGLA+ + E +S+
Sbjct: 116 LLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR------IYSFEMALTSV 166
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
+ T+ Y APE + S + D++S G + E+F R+
Sbjct: 167 VV--TLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 2e-15
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 710 NMIGQGSFGFVYRGILGEGG---LLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+IG+G FG VY G L + + AVK LN +T + F+ E +++ H N++
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ IC + S G +V YM++G L ++ V DL + + +A +
Sbjct: 61 LLGIC--LPSEGSPL--VVLPYMKHGDLRNFIRSETHNPTVKDL-----IGFGLQVAKGM 111
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
EYL +H DL N +LD V DFGLA+ +Y + V + G K
Sbjct: 112 EYL---ASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT---GAKLP 165
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
V ++A E + + DV+SFG+LL E+ R P
Sbjct: 166 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 201
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 76.6 bits (188), Expect = 3e-15
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNLIKIITIC 770
IG+G+FG V+ G L VAVK T K+ F+ E L+ H N++++I +C
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH- 829
+ + +V E +Q G +L + V +L + + + A +EYL
Sbjct: 63 TQ--KQPI---YIVMELVQGGDFLTFLRTEGPRLKVKEL-----IQMVENAAAGMEYLES 112
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT-VGY 888
HC IH DL N L+ V + DFG+++ + D V +S+ G+K V +
Sbjct: 113 KHC----IHRDLAARNCLVTEKNVLKISDFGMSRE----EEDGVY--ASTGGMKQIPVKW 162
Query: 889 VAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE YG S S DV+SFGILL E F
Sbjct: 163 TAPEALNYGRYSSES---DVWSFGILLWEAF 190
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 3e-15
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR------HRNLIK 765
IG+G++G VY+ G +VA+K + L F+S ALR I+ H N+IK
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKIKL----RFESEGIPKTALREIKLLKELNHPNIIK 62
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ + H D LV+E+M L + + SLI+ + +
Sbjct: 63 LLDVFR----HKGDL-YLVFEFMDT-DLYKLIKDRQR---GLPESLIK--SYLYQLLQGL 111
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
+ H H I+H DLKP N+L++ + V + DFGLA+ + T T
Sbjct: 112 AFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RPYTHYVV-----T 161
Query: 886 VGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
Y APE +G + S D++S G + E+ R+
Sbjct: 162 RWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 3e-15
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 38/227 (16%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLT--------RKGAFKSFVA-ECEALRNIRHR 761
+IG GSFG VY G+ G L+AVK + L RK + +A E L+ ++H
Sbjct: 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
N+++ + SS+D+ ++ EY+ GS+ L + + + +L++ + I
Sbjct: 67 NIVQYLG--SSLDADHLNI---FLEYVPGGSVAALL----NNYGAFEETLVR--NFVRQI 115
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+ YLH+ IIH D+K +N+L+D+ + DFG++K +E S S
Sbjct: 116 LKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK--------KLEANSLSTK 164
Query: 882 -------IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
++G+V ++APE + + D++S G L++EM K P
Sbjct: 165 TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 6e-15
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 712 IGQGSFGFVYRGILGEGGL----LVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+ +FG +Y+G L G+ LVA+K L ++ + F E + + H N++ +
Sbjct: 13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCL 72
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWL-----HH----SNDQHDVCDLSLIQR--L 815
+ + + +++EY+ G L E+L H S+D+ SL L
Sbjct: 73 LGVVTQEQP-----VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFL 127
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
HIAI IA +EYL H +H DL N+L+ + + D GL++ +Y+ V+
Sbjct: 128 HIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQ- 183
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
P S + I+ ++ PE M + S D++SFG++L E+F
Sbjct: 184 PKSLLPIR----WMPPEAIMYGKFSSDSDIWSFGVVLWEIF 220
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 6e-15
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVK-------VLNLTRKGAFKSFVAECEALRNIRHRNLI 764
IG G++G V I G VA+K V L ++ + E + LR+ +H N+I
Sbjct: 13 IGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRT-----LRELKILRHFKHDNII 67
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHH--SNDQHDVCDLSLIQRLHIAIDIA 822
I I + D +V + M++ LHH +DQ L+ + +
Sbjct: 68 AIRDILRPPGADFKDV-YVVMDLMESD-----LHHIIHSDQ----PLTEEHIRYFLYQLL 117
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
++Y+H +IH DLKPSN+L++ D +GDFG+A+ L + + + +
Sbjct: 118 RGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYV-- 172
Query: 883 KGTVGYVAPEYGMGS--EASMAGDVYSFGILLLEMFIRK 919
T Y APE + S E + A D++S G + EM R+
Sbjct: 173 -ATRWYRAPEL-LLSLPEYTTAIDMWSVGCIFAEMLGRR 209
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 7e-15
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-----KGAFKSFVAECEALRNIRHRNLIK 765
++GQG+FG VY + G +AVK + K + E + L+N++H +++
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQ 68
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
C D F EYM GS+++ L + ++ ++ I +
Sbjct: 69 YYG-CLRDDETLSIF----MEYMPGGSVKDQLK----AYGALTETVTRKY--TRQILEGV 117
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK-- 883
EYLH + I+H D+K +N+L D +GDFG +K L T SS G+K
Sbjct: 118 EYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC-------SSGTGMKSV 167
Query: 884 -GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT +++PE G DV+S G ++EM K P
Sbjct: 168 TGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPP 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 9e-15
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS---FVAECEALRNIRHR 761
+ +G G+FG V+ A+KV+ + K E L+ + H
Sbjct: 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
+I++ + D F ++ EY+ G L +L +S S L A +I
Sbjct: 62 FIIRLF--WTEHDQR---FLYMLMEYVPGGELFSYLRNSGR------FSNSTGLFYASEI 110
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A+EYLH I++ DLKP N+LLD + + DFG AK L D T
Sbjct: 111 VCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKL----RDRTWT------ 157
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ GT Y+APE + A D ++ GIL+ EM + P
Sbjct: 158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 74.6 bits (183), Expect = 1e-14
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK-SFVAECEALRNIRHRNLIKIITI 769
++G+G+FG V++G L + VAVK K F++E L+ H N++K+I +
Sbjct: 2 LLGKGNFGEVFKGTLKDK-TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
C+ +V E + G +L D +L Q + A+D A + YL
Sbjct: 61 CTQRQP-----IYIVMELVPGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLE 110
Query: 830 -HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT-VG 887
+C IH DL N L+ + V + DFG+++ Q DD SS G+K +
Sbjct: 111 SKNC----IHRDLAARNCLVGENNVLKISDFGMSR-----QEDD--GIYSSSGLKQIPIK 159
Query: 888 YVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ APE YG S S DV+S+GILL E F
Sbjct: 160 WTAPEALNYGRYSSES---DVWSYGILLWETF 188
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 1e-14
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 712 IGQGSFGFVY----RGILGEGG-LLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIK 765
+G+G FG V+ +GI EGG LV VK L T+ + F E + R + H+N+++
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD---LSLIQRLHIAIDIA 822
++ +C + H ++ EY G L+++L + + + LS Q++ + IA
Sbjct: 73 LLGLCREAEPH-----YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIA 127
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT---CQVDDVETPSSS 879
+++L + +H DL N L+ V L+K +Y ++ + P
Sbjct: 128 LGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIP--- 181
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ ++APE + S DV+SFG+L+ E+F
Sbjct: 182 ------LRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF 212
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 1e-14
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNL-----TRKGAFKSFVAECEALRNIRHRNLIK 765
++G GSFG VY G+ + G AVK ++L T + A K E L ++H N+++
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ D+ + E + GSL + L ++ +I RL+ I +
Sbjct: 67 YLGTEREEDNLYI-----FLELVPGGSLAKLLK----KYGSFPEPVI-RLYTR-QILLGL 115
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
EYLH +H D+K +N+L+D + V + DFG+AK V S + KG+
Sbjct: 116 EYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAK--------QVVEFSFAKSFKGS 164
Query: 886 VGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
++APE +A D++S G +LEM K P
Sbjct: 165 PYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPP 201
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 2e-14
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 45/251 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKI---- 766
+G G+ G V + + G ++AVK + L A K + E + L ++
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF 68
Query: 767 -----ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
I+IC EYM GSL++ L + L IA+ +
Sbjct: 69 YNNGDISIC--------------MEYMDGGSLDKILKEVQGRIPERILG-----KIAVAV 109
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+ YLH + IIH D+KPSN+L++ + DFG++ L V+ +
Sbjct: 110 LKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQL----VNSLAKTFV--- 160
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941
GT Y+APE G++ S+ D++S G+ L+E+ + P + I E L
Sbjct: 161 --GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE-----LL 213
Query: 942 QRVIEIVDPLL 952
Q ++ P L
Sbjct: 214 QYIVNEPPPRL 224
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-14
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 9/104 (8%)
Query: 398 LNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ 457
++G G+D L G IP++I KL +LQ + L N + G+IP SLG++T L L+L N
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 458 GNIPSSLGNCRSLLSLNVSQNKLTGALP---------KQIFNIT 492
G+IP SLG SL LN++ N L+G +P + FN T
Sbjct: 480 GSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFT 523
|
Length = 623 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 5e-14
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 43/227 (18%)
Query: 710 NMIGQGSFGFVYRG-ILGEGG----LLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNL 763
+G G+FG VY G G G L VAVK L + +S F+ E + H+N+
Sbjct: 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71
Query: 764 IKIITICSSIDSHGVDFKALVY----EYMQNGSLEEWLHHS-NDQHDVCDLSLIQRLHIA 818
+++I GV F+ L E M G L+ +L + L++ L A
Sbjct: 72 VRLI---------GVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCA 122
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH---DMVAHVGDFGLAKFLYTCQVDDVET 875
D+A +YL + IH D+ N LL VA + DFG+A+ +Y
Sbjct: 123 RDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY--------- 170
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAG------DVYSFGILLLEMF 916
+S KG + P M EA + G DV+SFG+LL E+F
Sbjct: 171 -RASYYRKGGRAML-PIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF 215
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 5e-14
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 50/222 (22%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL------NLTRKGAFKSFVAECEALRNIRHRNLI 764
++G+GS+G V + E G +VA+K + +K A + E L+ +RH NL+
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMR----EIRMLKQLRHENLV 63
Query: 765 KIITICSSIDSHGVDFKA---LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
+I + K LV+E++ + L++ + N D S +++ I
Sbjct: 64 NLIEVFRR--------KKRLYLVFEFVDHTVLDDLEKYPNG----LDESRVRK--YLFQI 109
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVET 875
IE+ H H IIH D+KP N+L+ V + DFG A+ L YT V
Sbjct: 110 LRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYV----- 161
Query: 876 PSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMF 916
T Y APE +G ++ A D+++ G L+ EM
Sbjct: 162 --------ATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEML 195
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 8e-14
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 711 MIGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRKGAF----KSFVAECEALRNIRHRNL 763
++G G FG + RG L + L VA+ L R G + F+AE L H N+
Sbjct: 12 ILGTGRFGELCRGCLKLPSKRELPVAIHTL---RAGCSDKQRRGFLAEALTLGQFDHSNI 68
Query: 764 IK---IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
++ +IT +++ +V EYM NG+L+ +L Q L Q + +
Sbjct: 69 VRLEGVITRGNTM--------MIVTEYMSNGALDSFLRKHEGQ-----LVAGQLMGMLPG 115
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+A ++YL + +H L VL++ D+V + F Q D E +++
Sbjct: 116 LASGMKYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFR------RLQEDKSEAIYTTM 166
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSMFN 927
K V + APE S A DV+SFGI++ E M +RP M
Sbjct: 167 SGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG 214
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 72.4 bits (177), Expect = 8e-14
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 23/236 (9%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVK---VLNLTRKGAFKSFVAECEALRNIRHRN 762
F IG+G F VYR G+ VA+K + +L A + E + L+ + H N
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+IK S I+ + ++ +V E G L + H Q + + + + +
Sbjct: 64 VIKYYA--SFIEDNELN---IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFV--QLC 116
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
A+E++H ++H D+KP+NV + V +GD GL +F + +++ +
Sbjct: 117 SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------KTTAAHSL 166
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938
GT Y++PE + + D++S G LL EM + P + D + ++ K
Sbjct: 167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKK 219
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 9e-14
Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G+G FG V + G L A K LN L ++ ++ + E L + R ++ +
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL-- 58
Query: 769 ICSSIDSHGVDFKA---LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ K LV M G L H N + + I +
Sbjct: 59 ------AYAFQTKTDLCLVMTIMNGGDLR--YHIYNVDEENPGFPEPRACFYTAQIISGL 110
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
E+LH II+ DLKP NVLLD+D + D GLA V+ + S + G GT
Sbjct: 111 EHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLA-------VELKDGQSKTKGYAGT 160
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945
G++APE G E + D ++ G+ L EM + P + G + K L QR++
Sbjct: 161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR---GEKVEN---KELKQRIL 214
Query: 946 EIVDPLLLLEVRTNNSKNPC 965
D + + + SK+ C
Sbjct: 215 N--DSVTYPDKFSPASKSFC 232
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 1e-13
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 712 IGQGSFGFVYRGILGEGG---LLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKII 767
+G G+FG V +G+ + VAVK L K F+ E + + H ++++I
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH-IAIDIAYAIE 826
+C + LV E G L ++L + ++ L + H +A+ +AY +E
Sbjct: 63 GVCKG------EPLMLVMELAPLGPLLKYLK---KRREIPVSDLKELAHQVAMGMAY-LE 112
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
H +H DL NVLL + A + DFG+++ L +++ G + +
Sbjct: 113 SKH------FVHRDLAARNVLLVNRHQAKISDFGMSRAL---GAGSDYYRATTAG-RWPL 162
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ APE YG S S DV+S+G+ L E F
Sbjct: 163 KWYAPECINYGKFSSKS---DVWSYGVTLWEAF 192
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 1e-13
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 48/234 (20%)
Query: 712 IGQGSFGFVY-------RGILGEGG-------LLVAVKVLNL-TRKGAFKSFVAECEALR 756
+G+G FG V+ LGEG +LVAVK+L K A F+ E + +
Sbjct: 13 LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMS 72
Query: 757 NIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH---------HSNDQHDVC 807
+++ N+I+++ +C S D ++ EYM+NG L ++L H+N+ +
Sbjct: 73 RLKNPNIIRLLGVCVSDDP-----LCMITEYMENGDLNQFLSQREIESTFTHANN---IP 124
Query: 808 DLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867
+S+ L++A+ IA ++YL +H DL N L+ + + DFG+++ LY+
Sbjct: 125 SVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYS 181
Query: 868 CQVDDVETPSSSIGIKG----TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
I+G + ++A E + + + A DV++FG+ L EMF
Sbjct: 182 ---------GDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 1e-13
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITI 769
+IG+G++G VYRG G +VA+K++NL T E L +R I
Sbjct: 8 LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67
Query: 770 CSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DIA 822
+G K ++ EY + GS+ + I +I++ ++
Sbjct: 68 ------YGSYLKGPRLWIIMEYAEGGSVRTLMKAGP----------IAEKYISVIIREVL 111
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
A++Y+H +IH D+K +N+L+ + + DFG+A L + S
Sbjct: 112 VALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALL-------NQNSSKRSTF 161
Query: 883 KGTVGYVAPEYGM-GSEASMAGDVYSFGILLLEM 915
GT ++APE G D++S GI + EM
Sbjct: 162 VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEM 195
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 1e-13
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 53/228 (23%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
F+ IG+GSFG VY+ I +VA+KV++L EA I ++
Sbjct: 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLE------------EAEDEI--EDIQ 47
Query: 765 KIITICSSIDS------HG---VDFK-ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQR 814
+ I S S +G K ++ EY GS DL +
Sbjct: 48 QEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGS-------------CLDLLKPGK 94
Query: 815 L---HIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
L +IA ++ +EYLH + IH D+K +N+LL + + DFG++ L
Sbjct: 95 LDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQL--- 148
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
T S GT ++APE S D++S GI +E+
Sbjct: 149 ----TSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA 192
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 1e-13
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+GS+ VY+GI G LVA+KV+++ T +G + + E L+ ++H N++ + I
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII 72
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
H + V+EYM + + H H ++ L + + Y+H
Sbjct: 73 -----HTKETLTFVFEYMHTDLAQYMIQHPGGLHP-YNVRLFM-----FQLLRGLAYIHG 121
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
I+H DLKP N+L+ + + DFGLA+ + +T SS + T+ Y
Sbjct: 122 Q---HILHRDLKPQNLLISYLGELKLADFGLAR----AKSIPSQTYSSEV---VTLWYRP 171
Query: 891 PEYGMGS-EASMAGDVYSFGILLLEMF 916
P+ +G+ + S A D++ G + +EM
Sbjct: 172 PDVLLGATDYSSALDIWGAGCIFIEML 198
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 1e-13
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 42/227 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GS G V G VAVK ++L ++ + E +R+ +H N++++
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMY---- 82
Query: 772 SIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
S+ V D +V E+++ G+L + + H+ + Q + + + A+ +LH
Sbjct: 83 --SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIATVCLAVLKALSFLHA 133
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
+IH D+K ++LL D + DFG C E P + GT ++A
Sbjct: 134 Q---GVIHRDIKSDSILLTSDGRVKLSDFGF------CAQVSKEVPRRK-SLVGTPYWMA 183
Query: 891 PE------YGMGSEASMAGDVYSFGILLLEM------FIRKRPTDSM 925
PE Y G+E D++S GI+++EM + + P +M
Sbjct: 184 PEVISRLPY--GTEV----DIWSLGIMVIEMVDGEPPYFNEPPLQAM 224
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 71.9 bits (176), Expect = 1e-13
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 706 FSTSNMIGQGSFGFVYRGIL---GEGGLLVAVKVL--NLTRKGAFKSFVAECEALRNIRH 760
F+ M+G+G FG V L VAVK+L ++ + F+ E ++ H
Sbjct: 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60
Query: 761 RNLIKIITICSSIDSHG-VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
N+IK+I + + G + ++ +M++G L +L S + L L + I
Sbjct: 61 PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI 120
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
DIA +EYL IH DL N +L+ +M V DFGL+K +Y+ D +S
Sbjct: 121 DIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSG--DYYRQGCAS 175
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918
K V ++A E + + DV++FG+ + E+ R
Sbjct: 176 ---KLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTR 211
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 1e-13
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKV--LNLTRKGAFKSFVAECEALRNIRHRNL 763
F IG+G++G VY+ G +VA+K L+ +G + + E L+ + H N+
Sbjct: 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+K++ + H + LV+E++ + L++++ D + + L +
Sbjct: 62 VKLLDVI-----HTENKLYLVFEFL-HQDLKKFM----DASPLSGIPLPLIKSYLFQLLQ 111
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPS 877
+ + H H ++H DLKP N+L++ + + DFGLA+ YT +V
Sbjct: 112 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV------- 161
Query: 878 SSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFIRKR--PTDS 924
T+ Y APE +G + S A D++S G + EM R+ P DS
Sbjct: 162 ------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 205
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 2e-13
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 703 TGEFSTSNMIGQGSFGFVYRGI-LGEGGLL---VAVKVL-NLTRKGAFKSFVAECEALRN 757
E ++G G FG V++GI + EG + VA+K + + + + F+ A+ +
Sbjct: 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS 65
Query: 758 IRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
+ H +++++ IC G + LV + GSL L H D D + L+
Sbjct: 66 LDHAYIVRLLGICP-----GASLQ-LVTQLSPLGSL---LDHVRQHRDSLDPQRL--LNW 114
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ IA + YL H ++H +L N+LL D + + DFG+A LY DD +
Sbjct: 115 CVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP---DDKKYFY 168
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
S K + ++A E + + DV+S+G+ + EM
Sbjct: 169 SE--HKTPIKWMALESILFGRYTHQSDVWSYGVTVWEM 204
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 2e-13
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 32/223 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKV--LNLTRKGAFKSFVAECEALRNIRHRN 762
EF N IG+G++G VYR G +VA+K ++ R G S + E L N+RH N
Sbjct: 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67
Query: 763 LIKI--ITICSSIDSHGVDFKALVYEYMQN--GSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
++++ + + +DS LV EY + SL + N S Q +
Sbjct: 68 IVELKEVVVGKHLDS-----IFLVMEYCEQDLASLLD-----NMP---TPFSESQVKCLM 114
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ + ++YLH + IIH DLK SN+LL + DFGLA+ P+
Sbjct: 115 LQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLAR--------TYGLPAK 163
Query: 879 SIGIK-GTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
+ K T+ Y APE +G + A D+++ G +L E+ K
Sbjct: 164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 3e-13
Identities = 93/365 (25%), Positives = 146/365 (40%), Gaps = 45/365 (12%)
Query: 235 NVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSN 294
N P S ++ L L + L + L+ + + S + N
Sbjct: 36 NFPDSNLESVAVNRLALNLSSNTLLL-LPSSLSRLLSLDLLSPSGISSLDGSENLLNLLP 94
Query: 295 LVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGL 354
L LDLNLN +++ + LTN + L
Sbjct: 95 LPSLDLNLNRLR----------------------------SNISELLELTNLTSLDLDNN 126
Query: 355 YGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPH 414
+P I L + ++++ N+I ++PS + NL NL + N L+ +P
Sbjct: 127 NITD----IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPK 180
Query: 415 EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLN 474
+ L+NL L L N + +P + L+ L EL+L +N + + SSL N ++L L
Sbjct: 181 LLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLE 238
Query: 475 VSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIP 534
+S NKL LP+ I N++ L LDLSNN ++ L G+L NL ELD+S N +S +P
Sbjct: 239 LSNNKLE-DLPESIGNLSNLE-TLDLSNNQISSISSL--GSLTNLRELDLSGNSLSNALP 294
Query: 535 ATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYL 594
LE L + L L + ++ SN P+ L L L L
Sbjct: 295 LIALLLLLLELLLNLLLT---LKALELKLNSILLNNNILSNGE-TSSPEALSILESLNNL 350
Query: 595 NISSN 599
N
Sbjct: 351 WTLDN 355
|
Length = 394 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 3e-13
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 33/264 (12%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRN 762
+F N IG+GSFG V++ + + A+K ++L++ + + E L +
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+I+ S +D ++ +V EY +NG L + L + D + R I I +
Sbjct: 61 IIRYYE--SFLDKGKLN---IVMEYAENGDLHKLLKMQRGRPLPEDQ--VWRFFIQILLG 113
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG- 881
A +LH I+H D+K N+ LD +GD G+AK L + +++
Sbjct: 114 LA--HLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLL---------SDNTNFAN 159
Query: 882 -IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940
I GT Y++PE + DV++ G++L E K P D+ N G I +
Sbjct: 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN-NQGALILKIIRGVF 218
Query: 941 P-------QRVIEIVDPLLLLEVR 957
P Q++ +++D L + R
Sbjct: 219 PPVSQMYSQQLAQLIDQCLTKDYR 242
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 71.1 bits (174), Expect = 3e-13
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIR---HRNLIKI 766
IG G++G VY+ G VA+K + + G S V E L+ + H N++++
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ +C++ + LV+E++ L +L D+ L + ++
Sbjct: 68 MDVCATSRTDRETKVTLVFEHVDQ-DLRTYL----DKVPPPGLPAETIKDLMRQFLRGLD 122
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
+LH +C I+H DLKP N+L+ + DFGLA+ +Y+CQ+ TP + T+
Sbjct: 123 FLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR-IYSCQM--ALTP-----VVVTL 171
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
Y APE + S + D++S G + EMF RK
Sbjct: 172 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 3e-13
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 712 IGQGSFG--FVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA--ECEALRNIRHRNLIKII 767
+G+G+FG +YR E LV K +NLTR + A E L ++H N+I
Sbjct: 8 LGKGAFGEATLYRR--TEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNII--- 62
Query: 768 TICSSIDSHGVDFKALV--YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ +H +D L+ EY G+L + + Q L I A+
Sbjct: 63 ----AYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQL----FEEEMVLWYLFQIVSAV 114
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
Y+H + I+H D+K N+ L + +GDFG++K L + + ET + GT
Sbjct: 115 SYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS-EYSMAET------VVGT 164
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKR 920
Y++PE G + + D+++ G +L E+ KR
Sbjct: 165 PYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 4e-13
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 33/213 (15%)
Query: 730 LLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788
+LVAVKVL A + F+ E + L + N+ +++ +C+ ++ EYM
Sbjct: 47 VLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPL-----CMIMEYM 101
Query: 789 QNGSLEEWL--HHSNDQHDVCDLSLIQR---LHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843
+NG L ++L H + C+ + L++A IA + YL +H DL
Sbjct: 102 ENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158
Query: 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA---- 899
N L+ + + DFG+++ LY+ V+ G P M E+
Sbjct: 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ---------GRA--PLPIRWMAWESVLLG 207
Query: 900 --SMAGDVYSFGILLLE--MFIRKRPTDSMFND 928
+ DV++FG+ L E R++P + + +
Sbjct: 208 KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 6e-13
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 711 MIGQGSFGFVYRGI---LGEGGLLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNLIKI 766
IG+G FG VY+G+ + VAVK + + F+ E +R H +++K+
Sbjct: 13 CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
I + + + +V E G L +L + D+ L L + ++ A+
Sbjct: 73 IGVIT------ENPVWIVMELAPLGELRSYLQVNKYSLDLASLIL-----YSYQLSTALA 121
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YL +H D+ NVL+ +GDFGL+++L +D +S G K +
Sbjct: 122 YLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL-----EDESYYKASKG-KLPI 172
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRP 921
++APE + A DV+ FG+ + E+ + +P
Sbjct: 173 KWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP 208
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 70.1 bits (171), Expect = 6e-13
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 712 IGQGSFGFVYRGILG--EGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G FG V G L + L VAVK + + + + F++E ++ H N++++I
Sbjct: 7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66
Query: 768 TIC-SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+C +++S G ++ +M++G L +L +S L + DIA +E
Sbjct: 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC----QVDDVETPSSSIGI 882
YL IH DL N +L+ +M V DFGL+K +Y Q + P I I
Sbjct: 127 YL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918
+ V + DV+SFG+ + E+ R
Sbjct: 184 ESLADRV---------YTTKSDVWSFGVTMWEIATR 210
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 8e-13
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 712 IGQGSFGFVYR----GI---LGEGGLLVAVKVL--NLTRKGAFKSFVAECEALRNI-RHR 761
+G+G FG V R GI + + VAVK+L N T K ++E E ++ I +H+
Sbjct: 20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKD-LADLISEMELMKLIGKHK 78
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS-----NDQHDVCD-----LSL 811
N+I ++ +C+ G + ++ EY G+L E+L + D+ LS
Sbjct: 79 NIINLLGVCTQ---EGPLY--VIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSF 133
Query: 812 IQRLHIAIDIAYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQV 870
+ A +A +EYL C IH DL NVL+ D V + DFGLA+ V
Sbjct: 134 KDLVSCAYQVARGMEYLESRRC----IHRDLAARNVLVTEDNVMKIADFGLAR-----GV 184
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
D++ + + V ++APE + DV+SFGIL+ E+F
Sbjct: 185 HDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIF 230
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 9e-13
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 707 STSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVL--NLTRKGAFKSFVAECEALRNI- 758
+ +G+G+FG V + VAVK+L + T K V+E E ++ I
Sbjct: 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK-DLSDLVSEMEMMKMIG 73
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVC----DLSLIQR 814
+H+N+I ++ +C+ G + +V EY +G+L ++L + +
Sbjct: 74 KHKNIINLLGVCTQ---EGPLY--VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEET 128
Query: 815 L------HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
L A +A +E+L IH DL NVL+ D V + DFGLA+ ++
Sbjct: 129 LTQKDLVSFAYQVARGMEFL---ASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHI 185
Query: 869 ----QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ + P V ++APE + DV+SFG+LL E+F
Sbjct: 186 DYYRKTTNGRLP---------VKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 40/225 (17%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLV--AVKVLN-LTRKGAFKSFVAECEALRNI-RHRNLIK 765
++IG+G+FG V R ++ + GL + A+K+L + + F E E L + H N+I
Sbjct: 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIIN 67
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS----------NDQHDVCDLSLIQRL 815
++ C ++ G + A+ EY G+L ++L S + L+ Q L
Sbjct: 68 LLGAC---ENRGYLYIAI--EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLL 122
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
A D+A ++YL + IH DL NVL+ ++ + + DFGL++
Sbjct: 123 QFASDVATGMQYL---SEKQFIHRDLAARNVLVGENLASKIADFGLSR------------ 167
Query: 876 PSSSIGIKGTVG-----YVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ +K T+G ++A E S + DV+SFG+LL E+
Sbjct: 168 -GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-12
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 382 NQ-ISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSL 440
NQ + G IP+ I L +L + N + G IP +G +T+L++L L +N GSIP SL
Sbjct: 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESL 486
Query: 441 GNLTLLTELELQSNYLQGNIPSSLG 465
G LT L L L N L G +P++LG
Sbjct: 487 GQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 2e-12
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-------HRNLI 764
+G G+FG VY E G LVA+K + K F S+ EC LR ++ H N++
Sbjct: 7 LGDGTFGSVYLARNKETGELVAIKKM----KKKFYSW-EECMNLREVKSLRKLNEHPNIV 61
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
K+ + ++ + F V+EYM E L+ S I I
Sbjct: 62 KLKEVF--RENDELYF---VFEYM-----EGNLYQLMKDRKGKPFSESVIRSIIYQILQG 111
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
+ ++H H H DLKP N+L+ V + DFGLA+
Sbjct: 112 LAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 2e-12
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 711 MIGQGSFG--FVYRGILG-EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK-- 765
++GQGSFG F+ R I G + G L A+KVL +K K + +R R+++
Sbjct: 3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVL---KKATLKVR----DRVRTKMERDILAEV 55
Query: 766 ----IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAI 819
I+ + + + G + L+ ++++ G L L + DV + ++A
Sbjct: 56 NHPFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDV-------KFYLA- 105
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
++A A+++LH II+ DLKP N+LLD + + DFGL+K + ++ +
Sbjct: 106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKA 155
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM-FNDGLTIHEFAMK 938
GTV Y+APE + + D +SFG+L+ EM P + +T+ A
Sbjct: 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL 215
Query: 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEE 974
+PQ + LL + N N G G G+EE
Sbjct: 216 GMPQFLSPEAQSLLRALFK-RNPANRLGAGPDGVEE 250
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 2e-12
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+G++ VY+G G +VA+K ++L +G + + E ++ ++H N++++ +
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH-DVCDLSLIQRLHIAIDIAYAIEYLH 829
H + LV+EYM L++++ D H L + I + H
Sbjct: 68 -----HTENKLMLVFEYMDK-DLKKYM----DTHGVRGALDPNTVKSFTYQLLKGIAFCH 117
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ ++H DLKP N+L++ + DFGLA+ V T S+ + T+ Y
Sbjct: 118 EN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGI----PVNTFSNEV---VTLWYR 167
Query: 890 APEYGMGSEA-SMAGDVYSFGILLLEMF 916
AP+ +GS S + D++S G ++ EM
Sbjct: 168 APDVLLGSRTYSTSIDIWSVGCIMAEMI 195
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 69.1 bits (170), Expect = 2e-12
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 54/229 (23%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR----------HR 761
+G+G++G V++ I +VA+K K F +F +A R R H
Sbjct: 15 LGKGAYGIVWKAIDRRTKEVVALK------K-IFDAFRNATDAQRTFREIMFLQELGDHP 67
Query: 762 NLIKIITICSSIDSHGVDFKA-------LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQR 814
N++K++ + KA LV+EYM+ D H V ++++
Sbjct: 68 NIVKLLNV----------IKAENDKDIYLVFEYMET-----------DLHAVIRANILED 106
Query: 815 LH---IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
+H I + A++Y+H +IH DLKPSN+LL+ D + DFGLA+ L + +
Sbjct: 107 VHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSL-SELEE 162
Query: 872 DVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
+ E P + + T Y APE +GS + D++S G +L EM + K
Sbjct: 163 NPENPVLTDYV-ATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 3e-12
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G VAVK L + G ++F+ E ++ ++H L+++ +
Sbjct: 14 LGAGQFGEVWMGYY-NNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
+ + ++ EYM GSL ++L + L + + + IA + Y+
Sbjct: 70 VTKEEP-----IYIITEYMAKGSLLDFLKSDEGGK----VLLPKLIDFSAQIAEGMAYIE 120
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+ IH DL+ +NVL+ ++ + DFGLA+ ++D E + G K + +
Sbjct: 121 ---RKNYIHRDLRAANVLVSESLMCKIADFGLARV-----IEDNEYTARE-GAKFPIKWT 171
Query: 890 APEYGMGSEASMAGDVYSFGILLLEM 915
APE ++ DV+SFGILL E+
Sbjct: 172 APEAINFGSFTIKSDVWSFGILLYEI 197
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 3e-12
Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 72/250 (28%)
Query: 699 LSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI 758
L TG F +IG+G++G VY+ + G LVA+K++++ + + E LR
Sbjct: 1 LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKY 59
Query: 759 -RHRNLIKIITICSSIDSHGVDFKA----------LVYEYMQNGSLEEWLHHSNDQHDVC 807
H N+ +G K LV E GS V
Sbjct: 60 SNHPNIATF---------YGAFIKKNPPGNDDQLWLVMELCGGGS-------------VT 97
Query: 808 DL-----SLIQRL---HIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856
DL +RL IA + + YLH + +IH D+K N+LL + A V
Sbjct: 98 DLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKN--AEV 152
Query: 857 G--DFGLAKFLYTCQVDDVETPSSSIGIKGT-VG---YVAPEYGMGSEA-----SMAGDV 905
DFG++ Q+D S++G + T +G ++APE E DV
Sbjct: 153 KLVDFGVSA-----QLD------STLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDV 201
Query: 906 YSFGILLLEM 915
+S GI +E+
Sbjct: 202 WSLGITAIEL 211
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 31/220 (14%)
Query: 712 IGQGSFGFVYRGI-LGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIR---HRNLIK 765
IG+G++G V++ L GG VA+K + + +G S + E LR++ H N+++
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSND----QHDVCDLSLIQRLHIAIDI 821
+ +C+ + LV+E++ L +L + + D+ + Q L
Sbjct: 69 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDM-MFQLLR----- 121
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+++LH H ++H DLKP N+L+ + DFGLA+ +Y+ Q+ +S+
Sbjct: 122 --GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQM-----ALTSVV 170
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ T+ Y APE + S + D++S G + EMF R++P
Sbjct: 171 V--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 207
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF-KSFVAECEALRNIRHRN 762
+ + +G+G+ G V + L G++ A+K + K + E E ++ +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60
Query: 763 LIKIITIC-----SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
++K SSI + EY + GSL+ + ++ + I
Sbjct: 61 IVKYYGAFLDESSSSI--------GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGK--I 110
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A + + YLH IIH D+KPSN+LL + DFG++ L S
Sbjct: 111 AESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN---------S 158
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ GT Y+APE G S+ DV+S G+ LLE+
Sbjct: 159 LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 6e-12
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 43/230 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKGAFK-SFVAECEALRNIRHRNLIKIITI 769
+G+G+FG VY+ + G +VA+K +L K F + + E + L+ ++H N++ +I +
Sbjct: 16 LGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDM 75
Query: 770 C-----SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI--QRLHIAIDIA 822
S G + +V YM + L L + + + + Q L
Sbjct: 76 AVERPDKSKRKRGSVY--MVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLE------ 126
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
I YLH + I+H D+K +N+L+D+ + + DFGLA+ P +
Sbjct: 127 -GINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYD--------GPPPNPKG 174
Query: 883 KGTVG------------YVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
G G Y PE +G + A D++ G + EMF R+
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 6e-12
Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 64/247 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRNLIKIIT 768
IG GSFG VY +VA+K ++ + K + ++ + E L+ +RH N I
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTI---- 78
Query: 769 ICSSIDSHGVDFKA---------LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
++K LV EY L ++D +V L Q + IA
Sbjct: 79 ----------EYKGCYLREHTAWLVMEYC--------LGSASDILEVHKKPL-QEVEIAA 119
Query: 820 ---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
+ YLH H + IH D+K N+LL + DFG A + +P
Sbjct: 120 ICHGALQGLAYLHSHER---IHRDIKAGNILLTEPGTVKLADFGSASLV---------SP 167
Query: 877 SSSIGIKGTVGYVAPEYGMG-SEASMAG--DVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933
++S GT ++APE + E G DV+S GI +E+ RK P +M N
Sbjct: 168 ANS--FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-N------ 218
Query: 934 EFAMKAL 940
AM AL
Sbjct: 219 --AMSAL 223
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 7e-12
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 47/241 (19%)
Query: 705 EFSTSNM-----IGQGSFGFVYRGILGEG----------GLLVAVKVL--NLTRKGAFKS 747
EFS + +G+G FG V ++ E + VAVK+L + T K
Sbjct: 11 EFSRDKLTLGKPLGEGCFGQV---VMAEALGIDKDKPKEAVTVAVKMLKDDATEKD-LSD 66
Query: 748 FVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL--------H 798
V+E E ++ I +H+N+I ++ C+ V + EY G+L E+L
Sbjct: 67 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYV-----IVEYASKGNLREYLRARRPPGME 121
Query: 799 HSNDQHDVCD--LSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAH 855
+S D V D ++ + +A +EYL C IH DL NVL+ + V
Sbjct: 122 YSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC----IHRDLAARNVLVTENNVMK 177
Query: 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ DFGLA+ V++++ + + V ++APE + DV+SFG+L+ E+
Sbjct: 178 IADFGLAR-----DVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 232
Query: 916 F 916
F
Sbjct: 233 F 233
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 8e-12
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 31/224 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFK-SFVAECEALRNIRHRN 762
E+ N I +G++G VYR + G +VA+K L + ++ F + + E L ++H N
Sbjct: 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPN 65
Query: 763 LIKI--ITICSSIDSHGVDFKALVYEYMQNG--SLEEWLHHSNDQHDVCDLSLIQRLHIA 818
++ + + + S++D +V EY+++ SL E + Q +V L ++Q L
Sbjct: 66 IVTVKEVVVGSNLDK-----IYMVMEYVEHDLKSLMETMKQPFLQSEVKCL-MLQLLS-- 117
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ +LH + I+H DLK SN+LL++ + + DFGLA+ + P +
Sbjct: 118 -----GVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAR-----EYGSPLKPYT 164
Query: 879 SIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRP 921
+ + T+ Y APE +G E S A D++S G + E + K+P
Sbjct: 165 QLVV--TLWYRAPELLLGAKEYSTAIDMWSVGCIFAE-LLTKKP 205
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 8e-12
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 705 EFSTSNM-----IGQGSFGFVYR----GILGEGGLL-VAVKVLNLT-RKGAFKSFVAECE 753
EF +N+ +G G+FG V G+ ++ VAVK+L T ++ ++E +
Sbjct: 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELK 90
Query: 754 ALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
+ ++ H N++ ++ C+ G ++ EY G L +L + L+L
Sbjct: 91 IMSHLGNHENIVNLLGACTI---GGPIL--VITEYCCYGDLLNFLRRKRESF----LTLE 141
Query: 813 QRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
L + +A + +L +C IH DL NVLL H + + DFGLA+
Sbjct: 142 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNVLLTHGKIVKICDFGLAR-------- 189
Query: 872 DVETPSSSIGIKGT----VGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
D+ S+ + +KG V ++APE + DV+S+GILL E+F
Sbjct: 190 DIMNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIF 237
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 9e-12
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 705 EFSTSNM-----IGQGSFGFVYR----GILGE---GGLLVAVKVL--NLTRKGAFKSFVA 750
E S + + +G+G FG V GI + + VAVK+L + T K V+
Sbjct: 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKD-LSDLVS 66
Query: 751 ECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS-----NDQH 804
E E ++ I +H+N+I ++ C+ LV EY G+L E+L +
Sbjct: 67 EMEMMKMIGKHKNIINLLGACT----QDGPLYVLV-EYASKGNLREYLRARRPPGMDYSF 121
Query: 805 DVC-----DLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859
D C L+ + A +A +EYL IH DL NVL+ D V + DF
Sbjct: 122 DTCKLPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADF 178
Query: 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
GLA+ V +++ + + V ++APE + DV+SFG+LL E+F
Sbjct: 179 GLAR-----DVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 230
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 9e-12
Identities = 63/208 (30%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEAL-RNIRHRNLIKII 767
IG+GSFG V G AVKVL + +K K +AE L +N++H L+ +
Sbjct: 3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGL- 61
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
D V +Y+ G L L Q + R + A +IA A+ Y
Sbjct: 62 ----HYSFQTADKLYFVLDYVNGGELFFHL-----QRERSFPEPRARFY-AAEIASALGY 111
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
LH II+ DLKP N+LLD + DFGL K + +E ++ GT
Sbjct: 112 LH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCK-------EGIEHSKTTSTFCGTPE 161
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEM 915
Y+APE D + G +L EM
Sbjct: 162 YLAPEVLRKQPYDRTVDWWCLGAVLYEM 189
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 1e-11
Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 14/219 (6%)
Query: 387 TIPSGIGNLVNLNGFGI---DLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNL 443
+ G NL+NL +LN+L I + +LTNL L LD N + IP +G L
Sbjct: 81 SSLDGSENLLNLLPLPSLDLNLNRLRSNISE-LLELTNLTSLDLDNNNIT-DIPPLIGLL 138
Query: 444 TL-LTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSN 502
L EL+L N ++ ++PS L N +L +L++S N L+ LPK + N++ L+ LDLS
Sbjct: 139 KSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN-NLDLSG 195
Query: 503 NFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLS 562
N ++D LP E+ L L ELD+S N + E+ ++LS +L L LS N +P S+
Sbjct: 196 NKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIG 252
Query: 563 SLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHF 601
+L +++ LDLS+N +S L +L+ L L++S N
Sbjct: 253 NLSNLETLDLSNNQIS--SISSLGSLTNLRELDLSGNSL 289
|
Length = 394 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 1e-11
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGI-LGEGGLL---VAVKVLN-LTRKGAFKSFVAECEALRNIR 759
E ++G G+FG VY+GI + EG + VA+K+LN T A F+ E + ++
Sbjct: 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 67
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
H +L++++ +C S LV + M +G L +++H D ++ L+ +
Sbjct: 68 HPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCV 116
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
IA + YL + ++H DL NVL+ + DFGLA+ L + E ++
Sbjct: 117 QIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-----EGDEKEYNA 168
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSM 925
G K + ++A E + + DV+S+G+ + E M +P D +
Sbjct: 169 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 1e-11
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 47/244 (19%)
Query: 691 FPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLV--AVKVL-NLTRKGAFKS 747
+P++ + ++ ++IG+G+FG V + + + GL + A+K + K +
Sbjct: 1 YPVLEWNDIK-------FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 53
Query: 748 FVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN----- 801
F E E L + H N+I ++ C + G + A+ EY +G+L ++L S
Sbjct: 54 FAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETD 108
Query: 802 -----DQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856
LS Q LH A D+A ++YL Q IH DL N+L+ + VA +
Sbjct: 109 PAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKI 165
Query: 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVG-----YVAPEYGMGSEASMAGDVYSFGIL 911
DFGL++ + +K T+G ++A E S + DV+S+G+L
Sbjct: 166 ADFGLSR-------------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 212
Query: 912 LLEM 915
L E+
Sbjct: 213 LWEI 216
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 1e-11
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 33/233 (14%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
+E+ IVS + K +++ IGQG+ G VY I G VA+K +NL ++ +
Sbjct: 5 LEKLRTIVSVGDPKK---KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKE 61
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHD 805
+ E +R +H N I + +DS+ V D +V EY+ GSL D
Sbjct: 62 LIINEILVMRENKHPN------IVNYLDSYLVGDELWVVMEYLAGGSLT----------D 105
Query: 806 VCDLSLIQRLHIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
V + + IA + A+E+LH + +IH D+K N+LL D + DFG
Sbjct: 106 VVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-- 160
Query: 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ Q+ ++ S+ + GT ++APE D++S GI+ +EM
Sbjct: 161 ---FCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 52/242 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG G++G VY+ G LVA+KV+ L F+ E L+ RH N++
Sbjct: 11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAY----- 65
Query: 772 SIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
G + +V EY GSL++ + LS +Q ++ + + Y
Sbjct: 66 ----FGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGP-----LSELQIAYVCRETLKGLAY 116
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK---- 883
LH + IH D+K +N+LL D + DFG++ L +++I +
Sbjct: 117 LHETGK---IHRDIKGANILLTEDGDVKLADFGVSAQL-----------TATIAKRKSFI 162
Query: 884 GTVGYVAPEYGMGSEASMAG-----DVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938
GT ++APE + + G D+++ GI +E+ + P MF+ +H M+
Sbjct: 163 GTPYWMAPE--VAAVERKGGYDGKCDIWALGITAIELAELQPP---MFD----LH--PMR 211
Query: 939 AL 940
AL
Sbjct: 212 AL 213
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 2e-11
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ + VAVK + + G+ ++F+AE ++ ++H L+K+
Sbjct: 14 LGAGQFGEVWMATYNKH-TKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKL--- 66
Query: 770 CSSIDSHGVDFKALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
H V K +Y E+M GSL ++L L + + + IA +
Sbjct: 67 ------HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSK----QPLPKLIDFSAQIAEGMA 116
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
++ Q IH DL+ +N+L+ +V + DFGLA+ ++D E + G K +
Sbjct: 117 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV-----IEDNEYTARE-GAKFPI 167
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKR-PTDSMFN 927
+ APE ++ DV+SFGILL+E+ R P M N
Sbjct: 168 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 2e-11
Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 47/243 (19%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRH 760
+F +IG+G+FG V+ + G + A+KVL + ++ AE + L +
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS 60
Query: 761 RNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
++K+ S D + LV EYM G L L DV R +IA +
Sbjct: 61 PWIVKLY--YSFQD---EEHLYLVMEYMPGGDLMNLLIR----KDVFPEETA-RFYIA-E 109
Query: 821 IAYAIEYLH--HHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAK--------FLYTC 868
+ A++ +H IH D+KP N+L+D D H+ DFGL K Y
Sbjct: 110 LVLALDSVHKLGF-----IHRDIKPDNILIDAD--GHIKLADFGLCKKMNKAKDREYYLN 162
Query: 869 QVDDVETPSSSIGIK--------------GTVGYVAPEYGMGSEASMAGDVYSFGILLLE 914
++ + + + GT Y+APE G+ + D +S G++L E
Sbjct: 163 DSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222
Query: 915 MFI 917
M
Sbjct: 223 MLY 225
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 2e-11
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 40/221 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIKIITI 769
IG+G++G VY+ G +VA+K + L +G + + E L+ + H N+++++ +
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66
Query: 770 CSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQR-LHIAIDIAYAIEY 827
S + K LV+E++ + L++++ S D LI+ L+ + I Y
Sbjct: 67 VHS------ENKLYLVFEFL-DLDLKKYMDSS--PLTGLDPPLIKSYLY---QLLQGIAY 114
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPSSSIG 881
H H ++H DLKP N+L+D + + DFGLA+ YT +V
Sbjct: 115 CHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVV---------- 161
Query: 882 IKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
T+ Y APE +GS S D++S G + EM + +RP
Sbjct: 162 ---TLWYRAPEILLGSRQYSTPVDIWSIGCIFAEM-VNRRP 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 2e-11
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVK---VLNLTRKGAFKSFVAECEALRNIRHR 761
F IG+G F VYR VA+K + + A + V E + L+ + H
Sbjct: 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
N+IK + S I+ + ++ +V E G L + + + Q + + + + +
Sbjct: 63 NVIKYLD--SFIEDNELN---IVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFV--QL 115
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A+E++H ++H D+KP+NV + V +GD GL +F + +++
Sbjct: 116 CSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------KTTAAHS 165
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ GT Y++PE + + D++S G LL EM + P
Sbjct: 166 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 205
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 2e-11
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 40/228 (17%)
Query: 712 IGQGSFGFVYRGILGEG-GL---------LVAVKVL--NLTRKGAFKSFVAECEALRNI- 758
+G+G FG V ++ E GL VAVK+L + T K ++E E ++ I
Sbjct: 26 LGEGCFGQV---VMAEAIGLDKEKPNRVTKVAVKMLKSDATEKD-LSDLISEMEMMKMIG 81
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH----------HSNDQHDVCD 808
+H+N+I ++ C+ V + EY G+L E+L ++ Q
Sbjct: 82 KHKNIINLLGACTQDGPLYV-----IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136
Query: 809 LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
LS + A +A +EYL IH DL NVL+ D V + DFGLA+
Sbjct: 137 LSFKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----- 188
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ ++ + + V ++APE + DV+SFG+LL E+F
Sbjct: 189 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 236
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.5 bits (159), Expect = 2e-11
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLV--AVKVLN-LTRKGAFKSFVAECEALRNI-RHRNLIK 765
++IG+G+FG V + + + GL + A+K + K + F E E L + H N+I
Sbjct: 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 60
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN----------DQHDVCDLSLIQRL 815
++ C + G + A+ EY +G+L ++L S LS Q L
Sbjct: 61 LLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 115
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
H A D+A ++YL Q IH DL N+L+ + VA + DFGL++
Sbjct: 116 HFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR------------ 160
Query: 876 PSSSIGIKGTVG-----YVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ +K T+G ++A E S + DV+S+G+LL E+
Sbjct: 161 -GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI 204
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 2e-11
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 39/230 (16%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL--NLTRKGAFKS-FVAECEALRNIRHRNLIKII 767
+IG+G G VY VA+K + +L+ K F+ E + ++ H ++ +
Sbjct: 9 LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68
Query: 768 TICSSIDS--------HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ICS D G K+L+ Q SL + L S+ L I
Sbjct: 69 SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKT--------SVGAFLSIFH 120
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
I IEY+H ++H DLKP N+LL + D+G A F ++++ +
Sbjct: 121 KICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIF---KKLEEEDLLDID 174
Query: 880 IGIK--------------GTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ + GT Y+APE +G AS + D+Y+ G++L +M
Sbjct: 175 VDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQM 224
|
Length = 932 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 3e-11
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 712 IGQGSFGFVYRGILGE--GGLLVAVKVLNLTRKGAF----KSFVAECEALRNIRHRNLIK 765
IG G FG V ILGE G A V+ R A F+ E + R+++H NL++
Sbjct: 3 IGNGWFGKV---ILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQ 59
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDV-CDLSLIQRLHIAIDIAYA 824
+ C+ + + LV E+ G L+ +L + D + +QR+ A +IA
Sbjct: 60 CLGQCTEVTPY-----LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM--ACEIALG 112
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ +LH + IH DL N LL D+ +GD+GL+ Y +D + +
Sbjct: 113 LLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK---EDYYVTPDQLWVP- 165
Query: 885 TVGYVAPE-----YG--MGSEASMAGDVYSFGILLLEMF 916
+ ++APE +G + + + +V+S G+ + E+F
Sbjct: 166 -LRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELF 203
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 3e-11
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQV-DDVETPSSSIGIKGTV 886
+HH +IH D+K +N+LL + + +GDFG +K +Y V DDV GT
Sbjct: 156 VHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK-MYAATVSDDVGRT-----FCGTP 209
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIE 946
YVAPE S D++S G+LL E+ KRP DG + E K L R
Sbjct: 210 YYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPF-----DGENMEEVMHKTLAGR--- 261
Query: 947 IVDPL 951
DPL
Sbjct: 262 -YDPL 265
|
Length = 496 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 3e-11
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+G+FG VY+ + + A+KVL+ K VA+ E I RN I + +
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSK------KEIVAKKEVAHTIGERN----ILVRT 50
Query: 772 SIDSH----GVDFK-------ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
+D G+ F LV +YM G L L Q + + +IA +
Sbjct: 51 LLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHL-----QKEGRFSEDRAKFYIA-E 104
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+ A+E+LH + I++ DLKP N+LLD + DFGL+K ++ ++
Sbjct: 105 LVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSK-------ANLTDNKTTN 154
Query: 881 GIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEM 915
GT Y+APE + + + D +S G+L+ EM
Sbjct: 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEM 190
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 3e-11
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GS G V + G LVAVK ++L ++ + E +R+ +H N++++
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM----- 82
Query: 772 SIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+S+ V D +V E+++ G+L + + H+ + Q + + + A+ LH
Sbjct: 83 -YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLKALSVLHA 134
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
+IH D+K ++LL HD + DFG C E P + GT ++A
Sbjct: 135 Q---GVIHRDIKSDSILLTHDGRVKLSDFGF------CAQVSKEVPRRK-SLVGTPYWMA 184
Query: 891 PEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND-GLTIHEFAMKALPQRV--IEI 947
PE D++S GI+++EM + P FN+ L + LP ++ +
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPKLKNLHK 241
Query: 948 VDPLL 952
V P L
Sbjct: 242 VSPSL 246
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 3e-11
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 712 IGQGSFGFVYRG----ILGEGGLL-VAVKVLNLTRKGA----FKSFVAECEALRNIRHRN 762
+G+G FG V + + G G VAVK+L ++ A + ++E L+ + H +
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKML---KENASSSELRDLLSEFNLLKQVNHPH 64
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN------------------DQH 804
+IK+ CS L+ EY + GSL +L S D
Sbjct: 65 VIKLYGACSQDGP-----LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119
Query: 805 DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864
D L++ + A I+ ++YL + ++H DL NVL+ + DFGL++
Sbjct: 120 DERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSRD 176
Query: 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+Y +D S I V ++A E + DV+SFG+LL E+
Sbjct: 177 VYE---EDSYVKRSKGRIP--VKWMAIESLFDHIYTTQSDVWSFGVLLWEI 222
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 4e-11
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G FG V + A+K + + G + +E E L H ++K+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLY- 59
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLH---HSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ D + + EY G L L ++ R +IA + A
Sbjct: 60 -RTFKDKKYIYM---LMEYCLGGELWTILRDRGLFDEYT--------ARFYIAC-VVLAF 106
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
EYLH+ II+ DLKP N+LLD + + DFG AK L + Q +T + GT
Sbjct: 107 EYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----KTWT----FCGT 155
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLE 914
YVAPE + + D +S GILL E
Sbjct: 156 PEYVAPEIILNKGYDFSVDYWSLGILLYE 184
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 5e-11
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 38 ALLAIKSQLHDPLGVTSSWNNSINLCQ---WTGVTCG----HRHQRVTKLYLRNQSIGGI 90
AL +KS L PL WN + Q W+G C + L L NQ + G
Sbjct: 376 ALQTLKSSLGLPLRF--GWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGF 433
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
+ + L L+ I+L+ N+ GNIP +G ++ L+ L L+ NSF+G IP +L ++L
Sbjct: 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLR 493
Query: 151 NFLAHGNNLVGQIAANIGYNWMRLEKLSIADN 182
+GN+L G++ A +G + + DN
Sbjct: 494 ILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 5e-11
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGAFK-SFVAECEALRNIRHRNLIK 765
+GQGSFG VY G GE VAVK +N + + F+ E ++ ++++
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLH----HSNDQHDVCDLSLIQRLHIAIDI 821
++ + S V V E M +G L+ +L + + +L + + +A +I
Sbjct: 74 LLGVVSKGQPTLV-----VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A + YL+ +H DL N ++ HD +GDFG+ + +Y ET G
Sbjct: 129 ADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-------ETDYYRKG 178
Query: 882 IKG--TVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
KG V ++APE + + D++SFG++L E+
Sbjct: 179 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 6e-11
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 170 NWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAG 229
W ++ L + + L G +P I L L+ IN+ N + G IP +LG + + L+++
Sbjct: 417 KWF-IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSY 475
Query: 230 NQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAEN 279
N F+G++P S+ L+SL +L L GN L G +P +G L +F +N
Sbjct: 476 NSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 6e-11
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVK--VLNLTRKGAFKSFVAECEALRNIRHRNLI-KIIT 768
IG+G++G VY+ G LVA+K L + +G + + E L+ + I +++
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLD 68
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWL-HHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + +G LV+EY+ + L++++ + I+ + A +
Sbjct: 69 VEHVEEKNGKPSLYLVFEYL-DSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA--H 125
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG-- 884
H H ++H DLKP N+L+D + + D GL + + SI +K
Sbjct: 126 CHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGR-------------AFSIPVKSYT 169
Query: 885 ----TVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
T+ Y APE +GS S D++S G + EM RK+P
Sbjct: 170 HEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEM-SRKQP 210
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 6e-11
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRN 762
+++ IG+G++G VY+G + G +VA+K + L +G + + E L+ ++H N
Sbjct: 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHH-SNDQHDVCDLSLIQR-LHIAID 820
++ + + L++E++ L+++L Q+ D L++ L+
Sbjct: 61 IVCLQDVL-----MQESRLYLIFEFLSM-DLKKYLDSLPKGQY--MDAELVKSYLY---Q 109
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF------LYTCQVDDVE 874
I I + H ++H DLKP N+L+D+ V + DFGLA+ +YT +V
Sbjct: 110 ILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVV--- 163
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
T+ Y APE +GS S D++S G + EM K+P
Sbjct: 164 ----------TLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEM-ATKKP 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 7e-11
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIIT-- 768
+IG+G FG VY + G + A+K L+ R K E AL R ++ +++
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALN---ERIMLSLVSTG 54
Query: 769 -----ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+C + H D + + M G L H+ QH V S + A +I
Sbjct: 55 DCPFIVCMTYAFHTPDKLCFILDLMNGGDL----HYHLSQHGV--FSEKEMRFYATEIIL 108
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+E++H+ +++ DLKP+N+LLD + D GLA C + P +S+
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-----CDFSK-KKPHASV--- 156
Query: 884 GTVGYVAPE-YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT GY+APE G+ + D +S G +L ++ P
Sbjct: 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 8e-11
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 31/199 (15%)
Query: 730 LLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788
+LVAVK+L K A F+ E + + ++ N+I+++ +C I S D ++ EYM
Sbjct: 47 VLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVC--ITS---DPLCMITEYM 101
Query: 789 QNGSLEEWL-----HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843
+NG L ++L + ++ DV +S + +A IA ++YL +H DL
Sbjct: 102 ENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLAT 158
Query: 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA---- 899
N L+ + + DFG+++ LY+ I+G V P M E+
Sbjct: 159 RNCLVGKNYTIKIADFGMSRNLYS---------GDYYRIQGRA--VLPIRWMSWESILLG 207
Query: 900 --SMAGDVYSFGILLLEMF 916
+ A DV++FG+ L E+
Sbjct: 208 KFTTASDVWAFGVTLWEIL 226
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 8e-11
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 49/231 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG VY+ E GL A K++ + + + F+ E + L +H N++ +
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLY---- 68
Query: 772 SIDSHGVDFKALVY-EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID---IAY---- 823
+++ + K + E+ G+L+ S++ L + I Y
Sbjct: 69 --EAYFYENKLWILIEFCDGGALD---------------SIMLELERGLTEPQIRYVCRQ 111
Query: 824 ---AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL-AKFLYTCQVDDVETPSSS 879
A+ +LH H +IH DLK N+LL D + DFG+ AK T Q D +
Sbjct: 112 MLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD-----TF 163
Query: 880 IGIKGTVGYVAPEYGMGSEASMA-----GDVYSFGILLLEMFIRKRPTDSM 925
I GT ++APE D++S GI L+E+ + P +
Sbjct: 164 I---GTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 9e-11
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 35/224 (15%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F +G GSFG V G A+K L + + + E L + H
Sbjct: 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHP 78
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS----NDQHDVCDLSLIQRLHI 817
++ ++ CS D + V F + E++ G L L + ND + + +
Sbjct: 79 FIVNMM--CSFQDENRVYF---LLEFVVGGELFTHLRKAGRFPND---------VAKFYH 124
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A ++ A EYLH II+ DLKP N+LLD+ V DFG AK + P
Sbjct: 125 A-ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAK----------KVPD 170
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ + GT Y+APE A D ++ G+LL E P
Sbjct: 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPP 214
|
Length = 329 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 9e-11
Identities = 62/263 (23%), Positives = 100/263 (38%), Gaps = 56/263 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHR-NLIKII 767
I +G+FG VY G A+KVL ++ K + AE + + K+
Sbjct: 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL---------HIA 818
S S D+ LV EY+ G SLI+ L
Sbjct: 64 ---YSFQSK--DYLYLVMEYLNGGDCA---------------SLIKTLGGLPEDWAKQYI 103
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
++ +E LH Q IIH D+KP N+L+D + DFGL++
Sbjct: 104 AEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----------- 149
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFNDGLT-- 931
+ GT Y+APE +G D +S G ++ E P D++F++ L+
Sbjct: 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR 209
Query: 932 --IHEFAMKALPQRVIEIVDPLL 952
E + +++++ LL
Sbjct: 210 INWPEEVKEFCSPEAVDLINRLL 232
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 1e-10
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 712 IGQGSFGFVYRGI--LGEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G+FG V +G+ + + + VA+KVL N K + E E + + + ++++I
Sbjct: 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+C + + LV E G L ++L D+ V ++ ++ +H ++ ++YL
Sbjct: 63 VCEA------EALMLVMEMASGGPLNKFLSGKKDEITVSNV--VELMH---QVSMGMKYL 111
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
+H DL NVLL + A + DFGL+K L DD + S G K + +
Sbjct: 112 E---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKAL---GADDSYYKARSAG-KWPLKW 164
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMF 916
APE + S DV+S+GI + E F
Sbjct: 165 YAPECINFRKFSSRSDVWSYGITMWEAF 192
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 1e-10
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEA--LRNIRHRNLIKIITI 769
IG+GSFG +Y +K ++LT+ + ++ E L ++H N I+T
Sbjct: 8 IGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN---IVTF 64
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
+S +G F +V EY G L + N Q V S Q L + I+ ++++H
Sbjct: 65 FASFQENGRLF--IVMEYCDGGDL---MKRINRQRGVL-FSEDQILSWFVQISLGLKHIH 118
Query: 830 HHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
I+H D+K N+ L + MVA +GDFG+A+ L D +E + + GT Y
Sbjct: 119 DR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN----DSMELAYTCV---GTPYY 168
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
++PE + D++S G +L E+ K P +
Sbjct: 169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG 204
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 1e-10
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRN------IRHRNLI 764
M+G+GSFG V+ L A+K L + EC + H L
Sbjct: 2 MLGKGSFGKVFLAELKGTNQFFAIKALK--KDVVLMDDDVECTMVEKRVLSLAWEHPFLT 59
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+ C+ + F V EY+ G L + H H L + A +I
Sbjct: 60 HLY--CTFQTKENLFF---VMEYLNGGDL---MFHIQSCHK---FDLPRATFYAAEIICG 108
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+++LH I++ DLK N+LLD D + DFG+ K +++ + + G
Sbjct: 109 LQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCK-------ENMLGDAKTCTFCG 158
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T Y+APE +G + + + D +SFG+LL EM I + P
Sbjct: 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 709 SNMIGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKGAFK-SFVAECEALRNIRHRNLIKI 766
IGQG+FG V++ + +VA+K VL K F + + E + L+ ++H N++ +
Sbjct: 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 76
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHH-----SNDQHDVCDLSLIQRLHIAIDI 821
I IC + + +K Y E+ H ++++ LS I++ + +
Sbjct: 77 IEICRTKATPYNRYKGSFYLVF------EFCEHDLAGLLSNKNVKFTLSEIKK--VMKML 128
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+ Y+H + I+H D+K +N+L+ D + + DFGLA+ + P+
Sbjct: 129 LNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK---PNRYTN 182
Query: 882 IKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIR 918
T+ Y PE +G + D++ G ++ EM+ R
Sbjct: 183 RVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR 220
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 1e-10
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843
V EY+ G L + H + A +I +++LH II+ DLK
Sbjct: 74 VMEYLNGGDL---MFHIQSSGR---FDEARARFYAAEIICGLQFLHKK---GIIYRDLKL 124
Query: 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG 903
NVLLD D + DFG+ K E +S+ GT Y+APE G + + +
Sbjct: 125 DNVLLDKDGHIKIADFGMCKENMN-----GEGKASTFC--GTPDYIAPEILKGQKYNESV 177
Query: 904 DVYSFGILLLEMFIRKRP 921
D +SFG+LL EM I + P
Sbjct: 178 DWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+GS+ VY+G G LVA+KV+ L + G + + E L+ ++H N++ + I
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII 72
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH-DVCDLSLIQRLHIAIDIAYAIEYLH 829
H + LV+EY+ + H H + L L Q L + Y+H
Sbjct: 73 -----HTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLR-------GLSYIH 120
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
Q I+H DLKP N+L+ + DFGLA+ V + + S + T+ Y
Sbjct: 121 ---QRYILHRDLKPQNLLISDTGELKLADFGLAR------AKSVPSHTYSNEVV-TLWYR 170
Query: 890 APEYGMGS-EASMAGDVYSFGILLLEM 915
P+ +GS E S D++ G + +EM
Sbjct: 171 PPDVLLGSTEYSTCLDMWGVGCIFVEM 197
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 62.8 bits (152), Expect = 1e-10
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS---FVAECEA--LRNIRHRNLIK 765
++GQG+FG VY + G +A K + + S ECE L+N++H +
Sbjct: 9 LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE---R 65
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
I+ + + EYM GS+++ L + S+ ++ I +
Sbjct: 66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQL----KAYGALTESVTRKY--TRQILEGM 119
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YLH + I+H D+K +N+L D +GDFG +K L T + S + GT
Sbjct: 120 SYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS----VTGT 172
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+++PE G DV+S G ++EM K P
Sbjct: 173 PYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 1e-10
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 712 IGQGSFGFVYRGILG--EGGLLVAVKVL-NLTRKGAFK-SFVAECEALRNIRHRNLIKII 767
+G G+FG V +G+ + VAVK+L N A K + E ++ + + ++++I
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
IC + + LV E + G L ++L ++H V + ++ + +H ++ ++Y
Sbjct: 63 GICEA------ESWMLVMELAELGPLNKFL--QKNKH-VTEKNITELVH---QVSMGMKY 110
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
L +H DL NVLL A + DFGL+K L D+ + + G K V
Sbjct: 111 LEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL---GADENYYKAKTHG-KWPVK 163
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ APE + S DV+SFG+L+ E F
Sbjct: 164 WYAPECMNYYKFSSKSDVWSFGVLMWEAF 192
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 1e-10
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 29/212 (13%)
Query: 730 LLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788
LLVAVK+L K A F+ E + L ++ N+I+++ +C D ++ EYM
Sbjct: 47 LLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDP-----LCMITEYM 101
Query: 789 QNGSLEEWL--HHSNDQ-----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPP 835
+NG L ++L HH +D+ H + +S LH+A+ IA ++YL
Sbjct: 102 ENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLN 158
Query: 836 IIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM 895
+H DL N L+ ++ + DFG+++ LY ++ + + I+ ++A E +
Sbjct: 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQG-RAVLPIR----WMAWECIL 213
Query: 896 GSEASMAGDVYSFGILLLEMFI--RKRPTDSM 925
+ + A DV++FG+ L E+ + +++P +
Sbjct: 214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIIT 768
++G+G++G V + G +VA+K + + K+ + E + LR +RH N++ +
Sbjct: 8 VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSND-QHDVCDLSLIQRLHIAIDIAYAIEY 827
LV+EY++ LE D + Q L AI Y
Sbjct: 68 AFRRKGRL-----YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQ-------AIAY 115
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
H H IIH D+KP N+L+ V + DFG A+ L + T + T
Sbjct: 116 CHSH---NIIHRDIKPENILVSESGVLKLCDFGFARAL-RARPASPLTDYVA-----TRW 166
Query: 888 YVAPEYGMGS-EASMAGDVYSFGILLLEMF 916
Y APE +G DV++ G ++ E+
Sbjct: 167 YRAPELLVGDTNYGKPVDVWAIGCIMAELL 196
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 2e-10
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL------TRKGAFKSFVAECEALRNI 758
E++ ++G+G++G VY G+ +G L +AVK + L + ++ E + L+++
Sbjct: 1 EWTKGEVLGKGAYGTVYCGLTNQGQL-IAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL 59
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
+H N+++ + C +D + + + E++ GS+ S++ R
Sbjct: 60 KHVNIVQYLGTC--LDDNTIS---IFMEFVPGGSIS---------------SILNRFGPL 99
Query: 819 IDIAY---------AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQ 869
+ + + YLH++C ++H D+K +NV+L + + + DFG A+ L
Sbjct: 100 PEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRL--AW 154
Query: 870 VDDVETPSSSI-GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
V T S+ + + GT ++APE S D++S G + EM K P SM
Sbjct: 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASM 211
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 2e-10
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG VY+ E G L A KV+ + + ++ E E L H ++K++
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL---- 75
Query: 772 SIDSHGVDFK-ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+ D K ++ E+ G+++ + + + +I R + A++YLH
Sbjct: 76 --GAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICR-----QMLEALQYLH- 127
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL-AKFLYTCQVDDVETPSSSIGIKGTVGYV 889
IIH DLK NVLL D + DFG+ AK + T Q D S I GT ++
Sbjct: 128 --SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD-----SFI---GTPYWM 177
Query: 890 APEYGM-----GSEASMAGDVYSFGILLLEM 915
APE M + D++S GI L+EM
Sbjct: 178 APEVVMCETMKDTPYDYKADIWSLGITLIEM 208
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 2e-10
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 31/235 (13%)
Query: 698 ELSKATGEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGAFKS-FVAE 751
E++ +T F +G+ FG VY+G L GE VA+K L +G + F E
Sbjct: 1 EINLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58
Query: 752 CEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDV----- 806
++H N++ ++ + + ++++ Y + L E+L + DV
Sbjct: 59 AMMRSRLQHPNIVCLLGVVTKEQP-----LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDD 113
Query: 807 -----CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861
L +HI IA +E+L H ++H DL NVL+ + + D GL
Sbjct: 114 DKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKISDLGL 170
Query: 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ +Y + +S + I+ +++PE M + S+ D++S+G++L E+F
Sbjct: 171 FREVYAADYYKL-MGNSLLPIR----WMSPEAIMYGKFSIDSDIWSYGVVLWEVF 220
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 2e-10
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 47/223 (21%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
F+ IG+GSFG VY+GI +VA+K+++L AE E + +I+
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--------AEDE-IEDIQQE---- 52
Query: 766 IITICSSIDS------HGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
IT+ S DS +G K ++ EY+ GS D+ ++
Sbjct: 53 -ITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGS----------ALDLLKPGPLEET 101
Query: 816 HIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
+IA +I ++YLH + IH D+K +NVLL GD LA F Q+ D
Sbjct: 102 YIATILREILKGLDYLHSERK---IHRDIKAANVLLSEQ-----GDVKLADFGVAGQLTD 153
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ ++ GT ++APE S D++S GI +E+
Sbjct: 154 TQIKRNT--FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 3e-10
Identities = 61/226 (26%), Positives = 89/226 (39%), Gaps = 43/226 (19%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN-------------LTRKGAFKSFVAECEALRN 757
++G+GSFG V L L AVKVL +T K AL
Sbjct: 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVL--------ALAG 53
Query: 758 IRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
+H L ++ + C + F V EY+ G L + H +
Sbjct: 54 -KHPFLTQLHS-CFQTKDR-LFF---VMEYVNGGDL---MFHIQRSGR---FDEPRARFY 101
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A +I +++LH II+ DLK NVLLD + + DFG+ K + V T +
Sbjct: 102 AAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCK---EGILGGVTTST 155
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
GT Y+APE A D ++ G+LL EM + P +
Sbjct: 156 ----FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE 197
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 4e-10
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 36/219 (16%)
Query: 712 IGQGSFGFVYRGI---LGEGGLL----VAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+GQG+F +++GI +G+ G L V +KVL+ + + +SF + + H++L+
Sbjct: 3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+C D +V EY++ GSL+ +L + + +++ +L +A +A+A
Sbjct: 63 LNYGVCVCGDES-----IMVQEYVKFGSLDTYLKKNKNL-----INISWKLEVAKQLAWA 112
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ +L + HG++ NVLL + G+ K + P SI +
Sbjct: 113 LHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIK---------LSDPGISITVLP 160
Query: 885 T------VGYVAPEYGMGSEA-SMAGDVYSFGILLLEMF 916
+ +V PE + S+A D +SFG L E+F
Sbjct: 161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIF 199
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 4e-10
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 28/237 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGAFK-SFVAECEALRNI 758
+ + S +GQGSFG VY GI E VA+K +N + F+ E ++
Sbjct: 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 66
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH----HSNDQHDVCDLSLIQR 814
++++++ + S V + E M G L+ +L + SL +
Sbjct: 67 NCHHVVRLLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKM 121
Query: 815 LHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
+ +A +IA + YL+ + +H DL N ++ D +GDFG+ + +Y E
Sbjct: 122 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-------E 171
Query: 875 TPSSSIGIKG--TVGYVAPEYGMGSEASMAGDVYSFGILLLEM-FIRKRPTDSMFND 928
T G KG V +++PE + DV+SFG++L E+ + ++P M N+
Sbjct: 172 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE 228
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 5e-10
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 351 ALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTG 410
LGL G +P+ I+ L IN+ N I G IP +G++ +L + N G
Sbjct: 422 GLGLDNQGLRGFIPNDISKLRHLQ-SINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG 480
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTL 445
+IP +G+LT+L++L L+ N L G +P +LG L
Sbjct: 481 SIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLL 515
|
Length = 623 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 5e-10
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 384 ISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNL 443
I+ P V +N ++L+ T + L + +L NL
Sbjct: 33 INLNFPDSNLESVAVNRLALNLSSNTLLLLPSSLSRLLSLDLLSPSGISSLDGSENLLNL 92
Query: 444 TLLTELELQSNYLQGNIPSSLGNC--RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLS 501
L L+L N L+ NI L SL N + + + N+ LDLS
Sbjct: 93 LPLPSLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLK----ELDLS 148
Query: 502 NNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSL 561
+N + LP + NL NL LD+S N +S ++P LS ++L L+LS N +P +
Sbjct: 149 DNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEI 205
Query: 562 SSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSG 621
L +++ LDLS+N++ ++ L NL L L +S+N E + G SN + LS
Sbjct: 206 ELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSN 264
Query: 622 N 622
N
Sbjct: 265 N 265
|
Length = 394 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 5e-10
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842
V E++ G L + H D+ L + A +I +++LH II+ DLK
Sbjct: 73 FVMEFLNGGDL---MFHIQDKGR---FDLYRATFYAAEIVCGLQFLHSK---GIIYRDLK 123
Query: 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMA 902
NV+LD D + DFG+ K ++V + + GT Y+APE G + + +
Sbjct: 124 LDNVMLDRDGHIKIADFGMCK-------ENVFGDNRASTFCGTPDYIAPEILQGLKYTFS 176
Query: 903 GDVYSFGILLLEMFIRKRP 921
D +SFG+LL EM I + P
Sbjct: 177 VDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 6e-10
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVL------NLTRKGAFKSFVAECEALRNIRHRNLIK 765
IG+GS+G V++ E G +VA+K + +K A + E L+ ++H NL+
Sbjct: 9 IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALR----EIRMLKQLKHPNLVN 64
Query: 766 IITICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
+I + F+ LV+EY + L E + LI++ I
Sbjct: 65 LIEV----------FRRKRKLHLVFEYCDHTVLNELEKNPRG----VPEHLIKK--IIWQ 108
Query: 821 IAYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
A+ + H H+C IH D+KP N+L+ + DFG A+ L
Sbjct: 109 TLQAVNFCHKHNC----IHRDVKPENILITKQGQIKLCDFGFARIL 150
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 6e-10
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 29/222 (13%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR----KGAFKSFVAECEALRNIRHR 761
F ++G+G FG V + G + A K L R KG + + E + L + R
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMA-LNEKQILEKVNSR 60
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
++ + + D+ LV M G L+ ++H + + + A +I
Sbjct: 61 FVVSLAYAYETKDA-----LCLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEI 111
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI- 880
+E LH Q I++ DLKP N+LLD + D GLA V P
Sbjct: 112 CCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLA----------VHVPEGQTI 158
Query: 881 -GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
G GTVGY+APE + + D ++ G LL EM + P
Sbjct: 159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 6e-10
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 705 EFSTSNMIGQGSFGFVYR-GILGEGGLLVAVKVLNLT----------RKGAFKSFVAECE 753
E++ +G G+FG VY+ G L+A+K +N+ R + V+E
Sbjct: 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60
Query: 754 ALR-NIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
++ +RH N+++ D +V + ++ L E + ++ +
Sbjct: 61 IIKEQLRHPNIVRYYKTFLENDR-----LYIVMDLIEGAPLGEHFNSLKEKKQ--RFTEE 113
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
+ +I + + A+ YLH + I+H DL P+N++L D + DFGLAK Q
Sbjct: 114 RIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAK-----QKQP 166
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+S + GT+ Y PE DV++FG +L +M
Sbjct: 167 ESKLTSVV---GTILYSCPEIVKNEPYGEKADVWAFGCILYQM 206
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 6e-10
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIIT-- 768
+IG+G FG VY + G + A+K L+ R K E AL R ++ +++
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALN---ERIMLSLVSTG 54
Query: 769 -----ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+C S H D + + + M G L H+ QH V S + A +I
Sbjct: 55 DCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGV--FSEAEMRFYAAEIIL 108
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+E++H+ +++ DLKP+N+LLD + D GLA C + P +S+
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-----CDFSK-KKPHASV--- 156
Query: 884 GTVGYVAPE-YGMGSEASMAGDVYSFGILLLEMF 916
GT GY+APE G + D +S G +L ++
Sbjct: 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 190
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 7e-10
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 16/113 (14%)
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
IA+ I A+EYLH + +IH D+KPSNVL++ + + DFG++ +L VD V
Sbjct: 108 IAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL----VDSV-AK 160
Query: 877 SSSIGIKGTVGYVAPEYGMGSEASMAG-----DVYSFGILLLEMFIRKRPTDS 924
+ G K Y+APE + E + G DV+S GI ++E+ + P DS
Sbjct: 161 TIDAGCK---PYMAPER-INPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 7e-10
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
F+ IG+GSFG V++GI +VA+K+++L AE E + +I+
Sbjct: 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--------AEDE-IEDIQQE---- 52
Query: 766 IITICSSIDS------HGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
IT+ S DS +G K ++ EY+ GS + L Q
Sbjct: 53 -ITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG-------PFDEFQIA 104
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
+ +I ++YLH + IH D+K +NVLL + DFG+A Q+ D +
Sbjct: 105 TMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG-----QLTDTQI 156
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
++ GT ++APE S D++S GI +E+ + P M
Sbjct: 157 KRNT--FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 204
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 7e-10
Identities = 66/223 (29%), Positives = 95/223 (42%), Gaps = 44/223 (19%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF------KSFVAECEALRNIRHRNLIK 765
IG+G++G V E VA+K + AF K + E + LR++ H N+I
Sbjct: 13 IGRGAYGIVCSAKNSETNEKVAIKKIA----NAFDNRIDAKRTLREIKLLRHLDHENVIA 68
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHH--------SNDQHDVCDLSLIQRLHI 817
I I + +VYE M LH S+D C L Q L
Sbjct: 69 IKDIMPPPHREAFNDVYIVYELMDTD-----LHQIIRSSQTLSDDH---CQYFLYQLLR- 119
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
++Y+H ++H DLKPSN+LL+ + + DFGLA+ T + D T
Sbjct: 120 ------GLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR--TTSEKGDFMTEY 168
Query: 878 SSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRK 919
T Y APE + SE + A DV+S G + E+ RK
Sbjct: 169 VV-----TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRK 206
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 7e-10
Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKS----------FVA--ECEAL 755
+G+G++G V + G +VA+K + + K F E + +
Sbjct: 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM 74
Query: 756 RNIRHRNLIKIITI-CSSIDSHGVDFKALVYEYMQNGSLEEWLHHS---NDQHDVCDLSL 811
I+H N++ ++ + DF LV + M L++ + + C L
Sbjct: 75 NEIKHENIMGLVDVYVEG------DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQ 127
Query: 812 IQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA-KFLYTCQV 870
I + LH +H DL P+N+ ++ + + DFGLA ++ Y
Sbjct: 128 ILN---------GLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYS 175
Query: 871 D---DVETPSSSIGIKG---TVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
D ET + T+ Y APE MG+E A D++S G + E+ K
Sbjct: 176 DTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 60.9 bits (147), Expect = 8e-10
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 33/233 (14%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
ME+ IVS + K +++ IGQG+ G V+ I G VA+K +NL ++ +
Sbjct: 5 MEKLRTIVSIGDPKK---KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKE 61
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHD 805
+ E ++ +++ N++ +DS V D +V EY+ GSL D
Sbjct: 62 LIINEILVMKELKNPNIVNF------LDSFLVGDELFVVMEYLAGGSLT----------D 105
Query: 806 VCDLSLIQRLHIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
V + + IA + A+E+LH + +IH D+K NVLL D + DFG
Sbjct: 106 VVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFG-- 160
Query: 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ Q+ ++ S+ + GT ++APE D++S GI+ +EM
Sbjct: 161 ---FCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 60.9 bits (147), Expect = 8e-10
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
+E+ IVS + K F IGQG+ G VY + G VA++ +NL ++ +
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHD 805
+ E +R ++ N++ + +DS+ V D +V EY+ GSL D
Sbjct: 63 LIINEILVMRENKNPNIV------NYLDSYLVGDELWVVMEYLAGGSLT----------D 106
Query: 806 VCDLSLIQRLHIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
V + + IA + A+E+LH + +IH D+K N+LL D + DFG
Sbjct: 107 VVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-- 161
Query: 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ Q+ ++ S+ + GT ++APE D++S GI+ +EM + P
Sbjct: 162 ---FCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 9e-10
Identities = 24/41 (58%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 32 NETDRLALLAIKSQL-HDPLGVTSSWN-NSINLCQWTGVTC 70
DR ALLA KS L DP G SSWN +S + C WTGVTC
Sbjct: 1 LNDDRDALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTC 41
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 1e-09
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 33/233 (14%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
+E+ IVS + K F IGQG+ G VY I G VA+K +NL ++ +
Sbjct: 5 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKE 61
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHD 805
+ E +R ++ N++ + +DS+ V D +V EY+ GSL D
Sbjct: 62 LIINEILVMRENKNPNIV------NYLDSYLVGDELWVVMEYLAGGSLT----------D 105
Query: 806 VCDLSLIQRLHIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
V + + IA + A+++LH + +IH D+K N+LL D + DFG
Sbjct: 106 VVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG-- 160
Query: 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ Q+ ++ S+ + GT ++APE D++S GI+ +EM
Sbjct: 161 ---FCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 1e-09
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 29/229 (12%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL---GEG-GLLVAVKVL-NLTRKGAFKSFVAECEALRNIR 759
EF ++G G+FG VY+G+ GE + VA+K L T A K + E + ++
Sbjct: 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 67
Query: 760 HRNLIKIITIC--SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
+ ++ +++ IC S++ L+ + M G L +++ D + L L+
Sbjct: 68 NPHVCRLLGICLTSTVQ--------LITQLMPFGCLLDYVREHKDN--IGSQYL---LNW 114
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ IA + YL ++H DL NVL+ + DFGLAK L D+ E +
Sbjct: 115 CVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GADEKEYHA 168
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSM 925
G K + ++A E + + DV+S+G+ + E M +P D +
Sbjct: 169 E--GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 1e-09
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 28/175 (16%)
Query: 751 ECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD-- 808
E + L+ I HR +I +I H +K+ V M + D D
Sbjct: 136 EIDILKTISHRAIINLI--------HAYRWKSTVCMVMP--------KYKCDLFTYVDRS 179
Query: 809 --LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
L L Q + I + A+ YLH IIH D+K N+ LD A +GDFG A
Sbjct: 180 GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAA---- 232
Query: 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
C++D G GT+ +PE D++S G++L EM ++
Sbjct: 233 -CKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286
|
Length = 392 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 41/229 (17%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF-KSFVAECEALRNIRHRNL 763
+ + IG+G++G V G+ VA+K ++ F + + E + LR +H N+
Sbjct: 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENI 65
Query: 764 IKI--ITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL---H 816
I I I S +S F +V E M+ D+ L Q L H
Sbjct: 66 IGILDIIRPPSFES----FNDVYIVQELMET--------------DLYKLIKTQHLSNDH 107
Query: 817 IAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
I I ++Y+H ++H DLKPSN+LL+ + + DFGLA+ + D
Sbjct: 108 IQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLAR------IADP 158
Query: 874 ETPSSSIGIK--GTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
E + + T Y APE + S + A D++S G +L EM +
Sbjct: 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 712 IGQGSFGFVYRGIL--GEGGLLVAVKVL--NLTRKGAFKSFVAECEALRNIRHRNLIKII 767
IG G FG V + G V VK L N + K F+ + + R ++H N+++ +
Sbjct: 3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQ-NEFLQQGDPYRILQHPNILQCL 61
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
C + + LV+EY + G L+ +L L L+QR+ A +IA + +
Sbjct: 62 GQCV----EAIPY-LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRM--ACEIAAGVTH 114
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
+H H +H DL N L D+ VGD+G+ Y + D +ET +
Sbjct: 115 MHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY--KEDYIETEDDKC---VPLR 166
Query: 888 YVAPEYG-------MGSEASMAGDVYSFGILLLEMF 916
++APE + +E + +V++ G+ L E+F
Sbjct: 167 WLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELF 202
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGG----LLVAVKVLNL-TRKGAFKSFVAECEALRNIR 759
E ++G G+FG VY+GI G + VA+KVL T A K + E + +
Sbjct: 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 67
Query: 760 HRNLIKIITIC--SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
+ +++ IC S++ LV + M G L +++ + D+ DL L+
Sbjct: 68 SPYVCRLLGICLTSTVQ--------LVTQLMPYGCLLDYVRENKDRIGSQDL-----LNW 114
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ IA + YL + ++H DL NVL+ + DFGLA+ L D ET
Sbjct: 115 CVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLL-----DIDETEY 166
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE-MFIRKRPTDSM 925
+ G K + ++A E + + DV+S+G+ + E M +P D +
Sbjct: 167 HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 2e-09
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 41/225 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRNLIKIIT 768
IG GSFG VY +VAVK ++ + K ++ + E + L+ ++H N
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN------ 82
Query: 769 ICSSIDSHGVDFKA----LVYEYMQNGSLEEWLH-HSNDQHDVCDLSLIQRLHIAIDIAY 823
+I+ G K LV EY GS + L H +V +++ I H A+
Sbjct: 83 ---TIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEV-EIAAIT--HGAL---Q 132
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ YLH H +IH D+K N+LL + DFG A +P++S
Sbjct: 133 GLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSAS---------KSSPANS--FV 178
Query: 884 GTVGYVAPEYGMG-SEASMAG--DVYSFGILLLEMFIRKRPTDSM 925
GT ++APE + E G DV+S GI +E+ RK P +M
Sbjct: 179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 223
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 2e-09
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNL 763
F +G+GS+G VY+ A+K ++L + + V E L ++ H N+
Sbjct: 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI 61
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
I + +D + + +V EY G L + + + + I R I I +
Sbjct: 62 ISYKE--AFLDGNKL---CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWR--IFIQLLR 114
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-----FLYTCQVDDVETPSS 878
++ LH I+H DLK +N+LL + + +GD G++K T Q+
Sbjct: 115 GLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT-QI-------- 162
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
GT Y+APE G S D++S G LL EM
Sbjct: 163 -----GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM 194
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 2e-09
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+G++ V++G LVA+K + L +GA + + E L+N++H N++ + I
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSND---QHDVCDLSLIQRLHIAIDIAYAIEY 827
H LV+EY+ + L+++L + + H+V + + Q L + Y
Sbjct: 73 -----HTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNV-KIFMFQLLR-------GLSY 118
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
H I+H DLKP N+L++ + DFGLA+ V T + S + T+
Sbjct: 119 CHKR---KILHRDLKPQNLLINEKGELKLADFGLAR------AKSVPTKTYSNEVV-TLW 168
Query: 888 YVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934
Y P+ +GS E S D++ G +L EM RP MF G T+ E
Sbjct: 169 YRPPDVLLGSTEYSTPIDMWGVGCILYEM-ATGRP---MF-PGSTVKE 211
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEAL-RNIRHRNLIKI 766
+IG+GSFG V G AVKVL + +K +AE L +N++H L+ +
Sbjct: 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL 61
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
S + + F V +Y+ G L + H Q + C L R + A ++A AI
Sbjct: 62 HY--SFQTAEKLYF---VLDYVNGGEL--FFHL---QRERCFLEPRARFYAA-EVASAIG 110
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YLH II+ DLKP N+LLD + DFGL K + VE ++ GT
Sbjct: 111 YLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCK-------EGVEPEETTSTFCGTP 160
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
Y+APE D + G +L EM
Sbjct: 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEML 190
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 3e-09
Identities = 67/236 (28%), Positives = 97/236 (41%), Gaps = 51/236 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G+G G V+ L G L A+KVL+ + ++ K + E E L + H + T
Sbjct: 9 LGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHP---FLPT 65
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ +S + + LV +Y G L L Q C + R + A ++ A+EYL
Sbjct: 66 LYASFQTE--TYLCLVMDYCPGGELFRLL---QRQPGKCLSEEVARFYAA-EVLLALEYL 119
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGT- 885
H I++ DLKP N+LL H+ DF L+K Q D P S KG+
Sbjct: 120 H--LLG-IVYRDLKPENILLHES--GHIMLSDFDLSK-----QSDVEPPPVSKALRKGSR 169
Query: 886 -----------------------VG---YVAPEYGMGSEASMAGDVYSFGILLLEM 915
VG Y+APE G A D ++ GILL EM
Sbjct: 170 RSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEM 225
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 3e-09
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 42/229 (18%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
F+ IG+GSFG V++GI +VA+K+++L AE E + +I+
Sbjct: 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--------AEDE-IEDIQQE---- 52
Query: 766 IITICSSIDS------HGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
IT+ S DS +G K ++ EY+ GS + L L Q
Sbjct: 53 -ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-------PLDETQIA 104
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
I +I ++YLH + IH D+K +NVLL + DFG+A L Q+
Sbjct: 105 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----- 156
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
GT ++APE S D++S GI +E+ + P S
Sbjct: 157 --KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-AKGEPPHS 202
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 3e-09
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 50/225 (22%)
Query: 712 IGQGSFGFV---YRGILGEGGLLVAVKVL-----NLTR-KGAFKSFVAECEALRNIRHRN 762
IG G+ G V Y + G+ VA+K L N+T K A++ V ++ + H+N
Sbjct: 24 IGSGAQGIVCAAYDTVTGQN---VAIKKLSRPFQNVTHAKRAYRELVL----MKLVNHKN 76
Query: 763 LIKII---TICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
+I ++ T S++ +F+ LV E M + +L + + D H+ L Q L
Sbjct: 77 IIGLLNVFTPQKSLE----EFQDVYLVMELM-DANLCQVIQMDLD-HERMSYLLYQML-- 128
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
I++LH IIH DLKPSN+++ D + DFGLA+ T + TP
Sbjct: 129 -----CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 177
Query: 878 SSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGILLLEMFIRKR 920
T Y APE GMG + ++ D++S G ++ EM IR
Sbjct: 178 VV-----TRYYRAPEVILGMGYKENV--DIWSVGCIMGEM-IRGT 214
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 4e-09
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GS G V G VAVK ++L ++ + E +R+ H N++ +
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYN--- 86
Query: 772 SIDSHGV-DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
S+ V D +V E+++ G+L + + H+ + Q + + + A+ YLH+
Sbjct: 87 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIATVCLSVLRALSYLHN 136
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVA 890
+IH D+K ++LL D + DFG C E P + GT ++A
Sbjct: 137 Q---GVIHRDIKSDSILLTSDGRIKLSDFGF------CAQVSKEVPKRK-SLVGTPYWMA 186
Query: 891 PEYGMGSEASMAGDVYSFGILLLEM 915
PE D++S GI+++EM
Sbjct: 187 PEVISRLPYGTEVDIWSLGIMVIEM 211
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 4e-09
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 67/233 (28%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN------LTRKGAFKSFVAECEALRNIRHRNLIK 765
+G G++G V + G VA+K L+ + K ++ E L+++ H N+I
Sbjct: 23 VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYR----ELRLLKHMDHENVIG 78
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLI---QRL---HI 817
++ + + S DF+ LV M DL+ I Q+L HI
Sbjct: 79 LLDVFTP-ASSLEDFQDVYLVTHLMG-----------------ADLNNIVKCQKLSDDHI 120
Query: 818 AIDIAYAI----EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
+ Y I +Y+H IIH DLKPSN+ ++ D + DFGLA+ DD
Sbjct: 121 QF-LVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLAR-----HTDDE 171
Query: 874 ETPSSSIGIKGTVGYVAPE-------YGMGSEASMAGDVYSFGILLLEMFIRK 919
T G T Y APE Y + D++S G ++ E+ K
Sbjct: 172 MT-----GYVATRWYRAPEIMLNWMHY------NQTVDIWSVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 4e-09
Identities = 63/223 (28%), Positives = 93/223 (41%), Gaps = 53/223 (23%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI----- 766
+G G+FG VY+ E G+L A KV++ + + ++ E + L + H N++K+
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72
Query: 767 --------ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
I C+ G A++ E LE L + VC +L
Sbjct: 73 YENNLWILIEFCA-----GGAVDAVMLE------LERPLTEPQIRV-VCKQTL------- 113
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL-AKFLYTCQVDDVETPS 877
A+ YLH + IIH DLK N+L D + DFG+ AK T Q D
Sbjct: 114 ----EALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD----- 161
Query: 878 SSIGIKGTVGYVAPEYGMGSEAS-----MAGDVYSFGILLLEM 915
GT ++APE M + DV+S GI L+EM
Sbjct: 162 ---SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 5e-09
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
L LD L G IP + L L + L N ++GNIP SLG+ SL L++S N G++
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 485 PKQIFNITTLSLYLDLSNNFLNDSLPLEVG 514
P+ + +T+L + L+L+ N L+ +P +G
Sbjct: 483 PESLGQLTSLRI-LNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 5e-09
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 712 IGQGSFGFVYRGILGEG--GLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIKI 766
IG+G++G VY+ G G A+K G +S E LR ++H N++ +
Sbjct: 8 IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDL------SLI-QRLHIAI 819
+ + H L+++Y ++ + H Q + SL+ Q L+
Sbjct: 68 VEVFLE---HADKSVYLLFDYAEHDLWQIIKFHR--QAKRVSIPPSMVKSLLWQILN--- 119
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFGLAKFLYTCQVDDVET 875
+ YLH + ++H DLKP+N+L+ V +GD GLA+ ++
Sbjct: 120 ----GVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN----APLKP 168
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEM 915
+ + T+ Y APE +G+ + A D+++ G + E+
Sbjct: 169 LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 5e-09
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 706 FSTSNMIGQGSFG--FVYRGILG-EGGLLVAVKVLN----LTRKGAFKSFVAECEALRNI 758
F ++G G++G F+ R + G + G L A+KVL + + + E + L +
Sbjct: 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61
Query: 759 RHRNLIKIITICSSIDS--HGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQR 814
R + + D+ H L+ +Y+ G L L+ + +V R
Sbjct: 62 RRCPFLVTLHYAFQTDTKLH------LILDYVNGGELFTHLYQREHFTESEV-------R 108
Query: 815 LHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
++IA +I A+++LH Q II+ D+K N+LLD + + DFGL+K E
Sbjct: 109 VYIA-EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA------E 158
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEA--SMAGDVYSFGILLLEMFIRKRP 921
+ GT+ Y+APE G A D +S G+L E+ P
Sbjct: 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 6e-09
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 43/223 (19%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITI 769
IG+G++G VY+ +A+K + L ++ G + + E L+ ++H N++++ +
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSND---QHDVCDLSLIQRLHIAIDIAYAIE 826
H LV+EY+ + L++ + S D + L Q L I
Sbjct: 70 V-----HSEKRLYLVFEYL-DLDLKKHMDSSPDFAKNPRLIKTYLYQILR-------GIA 116
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVA-HVGDFGLAKFL------YTCQVDDVETPSSS 879
Y H H ++H DLKP N+L+D A + DFGLA+ +T +V
Sbjct: 117 YCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEV--------- 164
Query: 880 IGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
T+ Y APE +GS S D++S G + EM + ++P
Sbjct: 165 ----VTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEM-VNQKP 202
|
Length = 294 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 6e-09
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842
LV EY+ G L + H Q + + R + A +I A+ +LH + II+ DLK
Sbjct: 73 LVIEYVNGGDL---MFHMQRQRKLPEEH--ARFYAA-EICIALNFLH---ERGIIYRDLK 123
Query: 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMA 902
NVLLD D + D+G+ K + + ++ GT Y+APE G E +
Sbjct: 124 LDNVLLDADGHIKLTDYGMCK-------EGLGPGDTTSTFCGTPNYIAPEILRGEEYGFS 176
Query: 903 GDVYSFGILLLEMFIRKRPTDSMF-NDGLTIHEFAMKALPQRVIEI 947
D ++ G+L+ EM + P D + N + ++ + + ++ I I
Sbjct: 177 VDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI 222
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 6e-09
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 30/221 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC- 770
+G GS G V+ + + VAVK + LT + K + E + +R + H N++K+ +
Sbjct: 13 LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLG 72
Query: 771 ------SSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+ + ++ V EYM+ L L + L + Q L
Sbjct: 73 PSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLR------ 125
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
++Y+H ++H DLKP+NV ++ D+V +GDFGLA+ + D
Sbjct: 126 -GLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIV------DPHYSHKGYL 175
Query: 882 IKGTVG--YVAPEYGMG-SEASMAGDVYSFGILLLEMFIRK 919
+G V Y +P + + + A D+++ G + EM K
Sbjct: 176 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 6e-09
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V G A+K+L + K V E L+N RH L
Sbjct: 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT--- 58
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + +H D V EY G L + H S ++ + + R + A +I A+EY
Sbjct: 59 ALKYAFQTH--DRLCFVMEYANGGEL--FFHLSRERVFTEERA---RFYGA-EIVSALEY 110
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
LH +++ D+K N++LD D + DFGL K + + ++ GT
Sbjct: 111 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKTFCGTPE 160
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
Y+APE ++ A D + G+++ EM + P
Sbjct: 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 8e-09
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEAL-RNIRHRNLIKI 766
+IG+GSFG V AVKVL + +K K ++E L +N++H L+ +
Sbjct: 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 61
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
D V +Y+ G L +H Q + C L R + A +IA A+
Sbjct: 62 -----HFSFQTADKLYFVLDYINGGEL---FYHL--QRERCFLEPRARFYAA-EIASALG 110
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YLH I++ DLKP N+LLD + DFGL K +++E ++ GT
Sbjct: 111 YLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-------ENIEHNGTTSTFCGTP 160
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMF-----IRKRPTDSMFNDGL 930
Y+APE D + G +L EM R T M+++ L
Sbjct: 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 209
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 8e-09
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 34/249 (13%)
Query: 706 FSTSNMIGQGSFG--FVYRGILG-EGGLLVAVKVLN----LTRKGAFKSFVAECEALRNI 758
F ++G G++G F+ R + G + G L A+KVL + + + E + L +I
Sbjct: 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLH 816
R + + D+ L+ +Y+ G L L + +V +++
Sbjct: 62 RQSPFLVTLHYAFQTDTK----LHLILDYINGGELFTHLSQRERFKEQEV-------QIY 110
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
+I A+E+LH + II+ D+K N+LLD + + DFGL+K + D+VE
Sbjct: 111 SG-EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE---DEVERA 163
Query: 877 SSSIGIKGTVGYVAPEYGMGSEA--SMAGDVYSFGILLLEMFIRKRP--TDSMFNDGLTI 932
S GT+ Y+AP+ G + A D +S G+L+ E+ P D N I
Sbjct: 164 YS---FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEI 220
Query: 933 HEFAMKALP 941
+K+ P
Sbjct: 221 SRRILKSEP 229
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 8e-09
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNL---TRKGAFKSFVAECEA--LRNIRHRNLIK 765
++G+G+FG VY + G +AVK + +++ + + ECE L+N+RH +
Sbjct: 9 LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD---R 65
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
I+ + ++ EYM GS+++ L + ++ +R I +
Sbjct: 66 IVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQL----KAYGALTENVTRRY--TRQILQGV 119
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YLH + I+H D+K +N+L D +GDFG +K + T + S GIK
Sbjct: 120 SYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM-------SGTGIKSV 169
Query: 886 VG---YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
G +++PE G DV+S ++EM K P
Sbjct: 170 TGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 9e-09
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+GS+ VY+G G LVA+K + L +GA + + E L++++H N I+T+
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHAN---IVTLH 69
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWL-HHSN--DQHDVCDLSLIQRLHIAIDIAYAIEY 827
I H LV+EY+ L++++ H+V L L Q L + Y
Sbjct: 70 DII--HTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNV-RLFLFQLLR-------GLAY 118
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG--- 884
H ++H DLKP N+L+ + DFGLA+ + S+ K
Sbjct: 119 CHQR---RVLHRDLKPQNLLISERGELKLADFGLAR-------------AKSVPSKTYSN 162
Query: 885 ---TVGYVAPEYGMGS-EASMAGDVYSFGILLLEMF 916
T+ Y P+ +GS E S + D++ G + EM
Sbjct: 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMA 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 58.3 bits (141), Expect = 1e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 25/110 (22%)
Query: 201 INVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSL 260
+ ++ L G IPN + +LR+ +N++GN GN+PPS+ +++SLE+L L N
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNS----- 477
Query: 261 PIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP 310
F+G IP S ++L +L+LN N SG+VP
Sbjct: 478 --------------------FNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 57.8 bits (139), Expect = 1e-08
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 45/233 (19%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRN 762
FS IG GSFG VY +VA+K ++ + K + ++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 763 LIKIITICSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
+I G + LV EY L ++D +V L Q + IA
Sbjct: 77 ---------TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 118
Query: 819 IDIAYAIE---YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
A++ YLH H +IH D+K N+LL + +GDFG A +
Sbjct: 119 AVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM---------A 166
Query: 876 PSSSIGIKGTVGYVAPEYGMG-SEASMAG--DVYSFGILLLEMFIRKRPTDSM 925
P++ GT ++APE + E G DV+S GI +E+ RK P +M
Sbjct: 167 PANX--FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 1e-08
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 56/251 (22%)
Query: 685 SPMEQQFPIVSYAELS-KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVL-----N 738
S + QF V A+ + + IG G+ G V G+ VAVK L N
Sbjct: 1 SEEDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN 60
Query: 739 LTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL 797
T K A++ V L+ + H+N+I ++ + + SLEE+
Sbjct: 61 QTHAKRAYRELVL----LKCVNHKNIISLLNV-----------------FTPQKSLEEF- 98
Query: 798 HHSNDQH---DVCDLSLIQRLHIAID----------IAYAIEYLHHHCQPPIIHGDLKPS 844
D + ++ D +L Q +H+ +D + I++LH IIH DLKPS
Sbjct: 99 ---QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPS 152
Query: 845 NVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGD 904
N+++ D + DFGLA+ T + + TP T Y APE +G D
Sbjct: 153 NIVVKSDCTLKILDFGLAR---TACTNFMMTPYVV-----TRYYRAPEVILGMGYKENVD 204
Query: 905 VYSFGILLLEM 915
++S G ++ E+
Sbjct: 205 IWSVGCIMGEL 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 2e-08
Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 14/248 (5%)
Query: 77 VTKLYLRNQSIGGILSPHVGNL-SFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSF 135
+T L L N +I I P +G L S L+ +DL+DN ++P + L L L L+ N
Sbjct: 118 LTSLDLDNNNITDI-PPLIGLLKSNLKELDLSDNK-IESLPSPLRNLPNLKNLDLSFNDL 175
Query: 136 SGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNL 195
S +P LS SNL N L N + + I LE+L +++N + +L +S+ NL
Sbjct: 176 S-DLPKLLSNLSNL-NNLDLSGNKISDLPPEIELL-SALEELDLSNNSII-ELLSSLSNL 231
Query: 196 SVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNR 255
L + + N+L +P ++G L N L+++ NQ + S+ +L++L L L GN
Sbjct: 232 KNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQ--ISSISSLGSLTNLRELDLSGNS 288
Query: 256 LIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM----LDLNLNLFSGKVPI 311
L +LP+ L L + + + + +N ++ L +
Sbjct: 289 LSNALPLIALLLLLLELLLNLLLTLKALELKLNSILLNNNILSNGETSSPEALSILESLN 348
Query: 312 NFSRLQNL 319
N L N
Sbjct: 349 NLWTLDNA 356
|
Length = 394 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 2e-08
Identities = 62/231 (26%), Positives = 95/231 (41%), Gaps = 59/231 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI------RHRNLIK 765
IG G+FG V+ G VA+K + F++ V+ R + +H N++
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKM----PNVFQNLVSCKRVFRELKMLCFFKHDNVLS 63
Query: 766 IITICSSIDSHGVDFKALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLI----QRL--- 815
+ I +D +Y E MQ DL I Q L
Sbjct: 64 ALDILQPPH---IDPFEEIYVVTELMQ-----------------SDLHKIIVSPQPLSSD 103
Query: 816 HIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
H+ + I ++YLH I+H D+KP N+L++ + V + DFGLA+
Sbjct: 104 HVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLAR--------- 151
Query: 873 VETPSSSIGIKGTV---GYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
VE P S + V Y APE MGS + A D++S G + E+ R+
Sbjct: 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 2e-08
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 44/202 (21%)
Query: 727 EGGLLVAVK-------VLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSS------I 773
EG + VA K VL + +KG + + E L+N+ H ++I++ S +
Sbjct: 79 EGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135
Query: 774 DSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQ 833
H + + +Y Y+ S L + Q L I I + YLH
Sbjct: 136 LPH---YSSDLYTYLTKRSRP--------------LPIDQALIIEKQILEGLRYLHAQ-- 176
Query: 834 PPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEY 893
IIH D+K N+ ++ +GD G A+F V P + +G+ GTV APE
Sbjct: 177 -RIIHRDVKTENIFINDVDQVCIGDLGAAQF-------PVVAP-AFLGLAGTVETNAPEV 227
Query: 894 GMGSEASMAGDVYSFGILLLEM 915
+ + D++S GI+L EM
Sbjct: 228 LARDKYNSKADIWSAGIVLFEM 249
|
Length = 357 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 56.3 bits (135), Expect = 2e-08
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 699 LSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI 758
L G F ++G G++G VY+G + G L A+KV+++T + E L+
Sbjct: 1 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKY 59
Query: 759 -RHRNLIKIITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
HRN+ + G+D + LV E+ GS+ + + N + + I +
Sbjct: 60 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIA--Y 115
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
I +I + +LH H +IH D+K NVLL + + DFG+ + Q+D T
Sbjct: 116 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV-----SAQLD--RTV 165
Query: 877 SSSIGIKGTVGYVAPEYGMGSEASMA-----GDVYSFGILLLEM 915
GT ++APE E A D++S GI +EM
Sbjct: 166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
+I+ A+E+LH II+ DLKP N+LLD + DFGL K + + + +
Sbjct: 108 EISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCK-------ESIHEGTVT 157
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
GT+ Y+APE M S A D +S G L+ +M
Sbjct: 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDM 193
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-08
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V G A+K+L + K + E L+N RH L +
Sbjct: 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL- 60
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
D V EY+ G L + H S ++ D + R + A +I A++Y
Sbjct: 61 ----KYSFQTKDRLCFVMEYVNGGEL--FFHLSRERVFSEDRT---RFYGA-EIVSALDY 110
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
LH I++ DLK N++LD D + DFGL K + + ++ GT
Sbjct: 111 LH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCK-------EGITDAATMKTFCGTPE 160
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
Y+APE ++ A D + G+++ EM + P
Sbjct: 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRH 760
+F +GQG +G V+ + G +VA+K + L + + + E + L +
Sbjct: 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS 60
Query: 761 RNLIKII-------TICSSIDSH-GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
L+K++ + +++ G DF+ L+ G L E H+
Sbjct: 61 EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLL---NNLGVLSE--DHA------------ 103
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
R ++A ++ A++ LH + IH DLKP N L+D + DFGL+K
Sbjct: 104 -RFYMA-EMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSK--------- 149
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ + + G+ Y+APE G D +S G +L E
Sbjct: 150 -GIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEF 191
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 786 EYMQNGSLEEWLHHSND-QHDVCDLSLIQRLHIAIDIAYAIEYLH--HHCQPPIIHGDLK 842
E+M GSL+ ++ IA+ + + YL+ H I+H D+K
Sbjct: 83 EFMDCGSLDRIYKKGGPIPVEILG-------KIAVAVVEGLTYLYNVHR----IMHRDIK 131
Query: 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMA 902
PSN+L++ + DFG++ L D GT Y++PE G + ++
Sbjct: 132 PSNILVNSRGQIKLCDFGVSGELINSIADT---------FVGTSTYMSPERIQGGKYTVK 182
Query: 903 GDVYSFGILLLEMFIRKRP-TDSMFNDGLTIHEFAMKALPQRVIEIVDPLL 952
DV+S GI ++E+ + K P S +D + L Q++++ P L
Sbjct: 183 SDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL 233
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 3e-08
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 18/212 (8%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK---SFVAECEALRNIRHRNLIKIIT 768
IG G FG V G G V V L F+ E + R + H N+++ +
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
C + LV E+ G L+ +L SN +A ++A + +L
Sbjct: 63 QCIESIPY-----LLVLEFCPLGDLKNYLR-SNRGMVAQMAQKDVLQRMACEVASGLLWL 116
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS-SIGIKGTVG 887
H Q IH DL N L D+ +GD+GLA Y D T ++ ++
Sbjct: 117 H---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQY--PEDYYITKDCHAVPLRWLAP 171
Query: 888 YVAPEYG---MGSEASMAGDVYSFGILLLEMF 916
+ G + + + +++S G+ + E+F
Sbjct: 172 ELVEIRGQDLLPKDQTKKSNIWSLGVTMWELF 203
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 3e-08
Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 45/230 (19%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR----KGAFKSFVAECEALRNIRHR 761
F ++G+G FG V + G + A K L R KG + + E + L + +
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMA-LNEKQILEKVNSQ 60
Query: 762 NLIKIITICSSIDS--------HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQ 813
++ + + D+ +G D K +Y M N EE +
Sbjct: 61 FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYN-MGNPGFEEE----------------R 103
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
L A +I +E LH + ++ DLKP N+LLD + D GLA V
Sbjct: 104 ALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLA----------V 150
Query: 874 ETPSSSI--GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ P G GTVGY+APE +++ D + G L+ EM + P
Sbjct: 151 KIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 3e-08
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 806 VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
+CD+ I+R + AI+YLH + IIH D+K N+ ++H +GDFG A
Sbjct: 181 ICDILAIER-----SVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA--- 229
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
C D+ + G GT+ APE A D++S GI+L EM DS+
Sbjct: 230 --CFPVDI-NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH---DSL 283
Query: 926 FN-DGL 930
F DGL
Sbjct: 284 FEKDGL 289
|
Length = 391 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 3e-08
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G+G FG V + G + A K L+ L +K K + E E L + N I+
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV---NSPFIVN 57
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ + +S LV M G L+ +++ ++ L + + +H + I I +L
Sbjct: 58 LAYAFESK--THLCLVMSLMNGGDLKYHIYNVGER----GLEMERVIHYSAQITCGILHL 111
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H I++ D+KP NVLLD + D GLA ++ D +T + GT GY
Sbjct: 112 H---SMDIVYRDMKPENVLLDDQGNCRLSDLGLA-----VELKDGKTITQR---AGTNGY 160
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+APE S D ++ G + EM + P
Sbjct: 161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V G A+K+L + K + E L+N RH L +
Sbjct: 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 61
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
S +H D V EY G L + H S ++ D + R + A +I A++Y
Sbjct: 62 Y---SFQTH--DRLCFVMEYANGGEL--FFHLSRERVFSEDRA---RFYGA-EIVSALDY 110
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
LH + +++ DLK N++LD D + DFGL K + ++ ++ GT
Sbjct: 111 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGATMKTFCGTPE 161
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
Y+APE ++ A D + G+++ EM + P
Sbjct: 162 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 56.3 bits (135), Expect = 3e-08
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 45/233 (19%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRN 762
F+ IG GSFG VY +VA+K ++ + K + ++ + E + L+ I+H N
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 763 LIKIITICSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
SI+ G + LV EY L ++D +V L Q + IA
Sbjct: 87 ---------SIEYKGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 128
Query: 819 IDIAYAIE---YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
A++ YLH H +IH D+K N+LL + DFG A + +
Sbjct: 129 AITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSAS---------IAS 176
Query: 876 PSSSIGIKGTVGYVAPEYGMG-SEASMAG--DVYSFGILLLEMFIRKRPTDSM 925
P++S GT ++APE + E G DV+S GI +E+ RK P +M
Sbjct: 177 PANS--FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 227
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 34/210 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GS G V G VAVK+++L ++ + E +R+ +H+N++++
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYK--- 85
Query: 772 SIDSHGVDFKALV-YEYMQNGSLEEWLHHS--NDQH--DVCDLSLIQRLHIAIDIAYAIE 826
S+ V + V E++Q G+L + + + N++ VC+ S++Q A+
Sbjct: 86 ---SYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCE-SVLQ----------ALC 131
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD-DVETPSSSIGIKGT 885
YLH +IH D+K ++LL D + DFG + Q+ DV S + GT
Sbjct: 132 YLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFG-----FCAQISKDVPKRKSLV---GT 180
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
++APE + D++S GI+++EM
Sbjct: 181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEM 210
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+F + +G G+ G V++ GL++A K+++L K A ++ + L+ + N
Sbjct: 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 63
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
I+ + S G ++ E+M GSL++ L + + ++ ++ IA+
Sbjct: 64 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSIAV--IKG 115
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ YL + I+H D+KPSN+L++ + DFG++ L +++ ++S G
Sbjct: 116 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF--VG 164
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T Y++PE G+ S+ D++S G+ L+EM I + P
Sbjct: 165 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 4e-08
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V G A+K+L + K + E L+N RH L
Sbjct: 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLT--- 58
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ S +H D V EY G L + H S ++ D + R + A +I A+ Y
Sbjct: 59 ALKYSFQTH--DRLCFVMEYANGGEL--FFHLSRERVFSEDRA---RFYGA-EIVSALGY 110
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
LH +++ DLK N++LD D + DFGL K + + ++ GT
Sbjct: 111 LH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKTFCGTPE 160
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
Y+APE ++ A D + G+++ EM + P
Sbjct: 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 4e-08
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 21/228 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEAL--RNIRHRN 762
+F+ ++G+GSFG V L A+K+L + + EC + R + ++
Sbjct: 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILK--KDVVIQDDDVECTMVEKRVLALQD 58
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+T S VD V EY+ G L ++H V Q + A +I+
Sbjct: 59 KPPFLTQLHSC-FQTVDRLYFVMEYVNGGDL---MYHI---QQVGKFKEPQAVFYAAEIS 111
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ +LH + II+ DLK NV+LD + + DFG+ K VD V T +
Sbjct: 112 VGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMVDGVTTRT----F 161
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL 930
GT Y+APE + D +++G+LL EM + P D D L
Sbjct: 162 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 209
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 4e-08
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS---FVAECEA--LRNIRHRNLIK 765
++GQG+FG VY + G +AVK + + S ECE L+N+ H +++
Sbjct: 9 LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL--HIAIDIAY 823
+ ++ E+M GS+++ L +L + + I
Sbjct: 69 YYGCLRDPMERTL---SIFMEHMPGGSIKDQLKSYG--------ALTENVTRKYTRQILE 117
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ YLH + I+H D+K +N+L D +GDFG +K L T + S G+K
Sbjct: 118 GVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL-------SGTGMK 167
Query: 884 GTVG---YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
G +++PE G D++S G ++EM K P
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 5e-08
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 802 DQHDVCDLSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860
D D L L L + +A +++L +C IH D+ NVLL VA + DFG
Sbjct: 202 DTEDSWPLDLDDLLRFSSQVAQGMDFLASKNC----IHRDVAARNVLLTDGRVAKICDFG 257
Query: 861 LAKFLYTCQVDDVETPSSSIGIKGT----VGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
LA+ D+ S+ + +KG V ++APE ++ DV+S+GILL E+F
Sbjct: 258 LAR--------DIMNDSNYV-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 308
Query: 917 -IRKRPTDSMFND 928
+ K P + +
Sbjct: 309 SLGKSPYPGILVN 321
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 5e-08
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+F + +G G+ G V + GL++A K+++L K A ++ + L+ + N
Sbjct: 6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQI--IRELQVLHECNSP 63
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
I+ + S G ++ E+M GSL++ L + + ++ ++ IA+
Sbjct: 64 YIVGFYGAFYSDGE--ISICMEHMDGGSLDQVLKEAKRIPE----EILGKVSIAV--LRG 115
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ YL Q I+H D+KPSN+L++ + DFG++ L +++ ++S G
Sbjct: 116 LAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANSF--VG 164
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T Y++PE G+ S+ D++S G+ L+E+ I + P
Sbjct: 165 TRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 5e-08
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF-KSFVAECEALRNIRHRNLIKI-- 766
++G G+ G VY+ ++AVKV+ L K ++E E L +I
Sbjct: 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYG 66
Query: 767 -------ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
I+IC+ E+M GSL+ ++ +H ++ R IA+
Sbjct: 67 AFFVENRISICT--------------EFMDGGSLD--VYRKIPEH------VLGR--IAV 102
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
+ + YL I+H D+KPSN+L++ + DFG++ L V+ +
Sbjct: 103 AVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQL----VNSIAKTYV- 154
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y+APE G + + DV+S GI +E+ + + P
Sbjct: 155 ----GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFP 192
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 5e-08
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 694 VSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECE 753
+ + L G F ++G G++G VY+G + G L A+KV+++T + E
Sbjct: 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE-EEIKLEIN 64
Query: 754 ALRNI-RHRNLIKIITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSL 811
L+ HRN+ G D + LV E+ GS+ + + N + +
Sbjct: 65 MLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLV--KNTKGNALKEDW 122
Query: 812 IQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
I +I +I + +LH H +IH D+K NVLL + + DFG+ + Q+D
Sbjct: 123 IA--YICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGV-----SAQLD 172
Query: 872 DVETPSSSIGIKGTVGYVAPEYGMGSEASMA-----GDVYSFGILLLEM 915
T GT ++APE E A D++S GI +EM
Sbjct: 173 --RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 7e-08
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHR 761
EF I +G+FG VY G L AVKV+ ++ K AE +AL
Sbjct: 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA----- 59
Query: 762 NLIK---IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLH 816
L K I+ + S+ S + LV EY+ G ++ LH D+ + +
Sbjct: 60 -LSKSPFIVHLYYSLQS--ANNVYLVMEYLIGGDVKSLLHIYGYFDEE-------MAVKY 109
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT---CQVDDV 873
I+ ++A A++YLH H IIH DLKP N+L+ ++ + DFGL+K +D +
Sbjct: 110 IS-EVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDIL 165
Query: 874 ETPS 877
TPS
Sbjct: 166 TTPS 169
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 7e-08
Identities = 62/239 (25%), Positives = 97/239 (40%), Gaps = 51/239 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA---ECEALR----------NI 758
+G+G FG V + G L A+K L K + E E+L +
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALK-------KGDIIARDEVESLMCEKRIFETANSE 59
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
RH L+ + C + H V F V EY G L +H D S + + A
Sbjct: 60 RHPFLVNLFA-CFQTEDH-VCF---VMEYAAGGDL--MMHIHTDV-----FSEPRAVFYA 107
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ ++YLH + I++ DLK N+LLD + + DFGL K + +
Sbjct: 108 ACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCK-------EGMGFGDR 157
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP---------TDSMFND 928
+ GT ++APE + + A D + G+L+ EM + + P DS+ ND
Sbjct: 158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND 216
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 8e-08
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 64/230 (27%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIIT-- 768
IG+G+FG V + + G ++AVK + T K + + + + +R + I+
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVV--MRSSDCPYIVKFY 69
Query: 769 ----------ICSSIDSHGVD-FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
IC + +D F VYE +++ EE L I
Sbjct: 70 GALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILG-----------------KI 112
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A+ A+ YL + IIH D+KPSN+LLD + + DFG++ L VD
Sbjct: 113 AVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQL----VD------ 160
Query: 878 SSIGIKGTVG---YVAPE---------YGMGSEASMAGDVYSFGILLLEM 915
SI G Y+APE Y + S DV+S GI L E+
Sbjct: 161 -SIAKTRDAGCRPYMAPERIDPSARDGYDVRS------DVWSLGITLYEV 203
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 1e-07
Identities = 83/291 (28%), Positives = 122/291 (41%), Gaps = 43/291 (14%)
Query: 191 SIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250
++ NL L +++ NRL I + L +L N L++ N + P S+L+ L
Sbjct: 88 NLLNLLPLPSLDLNLNRLRSNI-SELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELD 146
Query: 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP 310
L N+ I SLP + LP L N ++ N+ S +P SN SNL LDL+ N S +P
Sbjct: 147 LSDNK-IESLPSPLRN-LPNLKNLDLSFNDLSD-LPKLLSNLSNLNNLDLSGNKIS-DLP 202
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
L L L L+ N++ ++ ++ L+N L L L N+
Sbjct: 203 PEIELLSALEELDLSNNSI-------IELLSSLSNLKNLSGLELSNNKLE---------- 245
Query: 371 STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
+P IGNL NL + NQ++ +G LTNL+ L L N
Sbjct: 246 ----------------DLPESIGNLSNLETLDLSNNQIS--SISSLGSLTNLRELDLSGN 287
Query: 431 LLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT 481
L ++P LL LEL N L L LL+ N+ N T
Sbjct: 288 SLSNALPL---IALLLLLLELLLNLLLTLKALELKLNSILLNNNILSNGET 335
|
Length = 394 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVL------NLTRKGAFKSFVAECEALRNIRHRNLIK 765
+G G++G V + G VA+K L L K A++ E L++++H N+I
Sbjct: 23 VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYR----ELRLLKHMKHENVIG 78
Query: 766 IITICS---SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
++ + + S+D DF LV +M L + + H D + Q L
Sbjct: 79 LLDVFTPDLSLDRFH-DF-YLVMPFMGT-DLGKLMKHEKLSEDRIQFLVYQMLK------ 129
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
++Y+H IIH DLKP N+ ++ D + DFGLA+ +T S G
Sbjct: 130 -GLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR----------QTDSEMTGY 175
Query: 883 KGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRK 919
T Y APE + + D++S G ++ EM K
Sbjct: 176 VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 712 IGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRKGAFKSFVA--ECEALRNIRHRNLIKI 766
IG+GSFG + IL E G +K +N+++ + + E L N++H N I
Sbjct: 8 IGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN---I 61
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ S + +G + +V +Y + G L + + N Q V Q L + I A++
Sbjct: 62 VQYQESFEENGNLY--IVMDYCEGGDLYKKI---NAQRGVL-FPEDQILDWFVQICLALK 115
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
++H I+H D+K N+ L D +GDFG+A+ L + VE + I GT
Sbjct: 116 HVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST----VELARTCI---GTP 165
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
Y++PE + D+++ G +L EM K
Sbjct: 166 YYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 1e-07
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 732 VAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDS--HGVDFKALVYE 786
VA+K+L + F E + H N++ ++ DS V+E
Sbjct: 6 VAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALL------DSGEAPPGLLFAVFE 59
Query: 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNV 846
Y+ +L E L + D L + + + + A+ H+ I+H DLKP N+
Sbjct: 60 YVPGRTLREVL--AADG----ALPAGETGRLMLQVLDALACAHNQ---GIVHRDLKPQNI 110
Query: 847 LL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG 903
++ A V DFG+ L + DV T + + + GT Y APE G +
Sbjct: 111 MVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNS 170
Query: 904 DVYSFGILLLE 914
D+Y++G++ LE
Sbjct: 171 DLYAWGLIFLE 181
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 1e-07
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ +I+ A+ +LH + II+ DLK NVLLD + + D+G+ K + +
Sbjct: 102 SAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK-------EGIRPGD 151
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
++ GT Y+APE G + + D ++ G+L+ EM + P D
Sbjct: 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 1e-07
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
I D+ +EY+H H I HGD+KP N+++D + ++ D+G+A + +E
Sbjct: 131 IMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASH-FIIHGKHIEYS 186
Query: 877 SSSIGI-KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933
+ +GT+ Y + G+ + GD+ S G +L+ K P ++G IH
Sbjct: 187 KEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244
|
Length = 294 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 2e-07
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842
V EY+ G L + H Q + + R + A +I+ A+ YLH + II+ DLK
Sbjct: 73 FVIEYVNGGDL---MFHMQRQRKLPEEH--ARFYSA-EISLALNYLH---ERGIIYRDLK 123
Query: 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMA 902
NVLLD + + D+G+ K + + ++ GT Y+APE G + +
Sbjct: 124 LDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176
Query: 903 GDVYSFGILLLEMFIRKRPTD 923
D ++ G+L+ EM + P D
Sbjct: 177 VDWWALGVLMFEMMAGRSPFD 197
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 27/225 (12%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+GSFG V L E G L AVKVL + + + + E L R+ + +
Sbjct: 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 61
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAIDIAYAI 825
C D V E++ G L + S D+ A +I A+
Sbjct: 62 YCCFQT----PDRLFFVMEFVNGGDLMFHIQKSRRFDEARAR--------FYAAEITSAL 109
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
+LH II+ DLK NVLLDH+ + DFG+ K + + ++ GT
Sbjct: 110 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-------EGIFNGKTTSTFCGT 159
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL 930
Y+APE + D ++ G+LL EM P ++ D L
Sbjct: 160 PDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL 204
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 2e-07
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+F +++G+G FG V G + A+KV+ + A + V+ E R+I +
Sbjct: 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETVSFFEEERDILSISNS 60
Query: 765 KIITICSSI--DSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
I D + LV EY G L L+ DQ D + Q ++A ++
Sbjct: 61 PWIPQLQYAFQDKDNL---YLVMEYQPGGDLLSLLNRYEDQFDE---DMAQ-FYLA-ELV 112
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
AI +H Q +H D+KP NVL+D + DFG A L + + +
Sbjct: 113 LAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARL---TANKMVNSKLPV-- 164
Query: 883 KGTVGYVAPEY--GM-GSEASMAG---DVYSFGILLLEMFIRKRP 921
GT Y+APE M G G D +S G++ EM + P
Sbjct: 165 -GTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 51/232 (21%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+F +G G+ G V + + GL++A K+++L K A+RN R L
Sbjct: 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK----------PAIRNQIIREL- 50
Query: 765 KIITICSSIDSHGVDFKALVY---------EYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
K++ C+S + V F Y E+M GSL++ L R+
Sbjct: 51 KVLHECNS--PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK------------AGRI 96
Query: 816 ------HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQ 869
I+I + + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 97 PENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---- 150
Query: 870 VDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+D S + GT Y++PE G+ ++ D++S G+ L+EM I + P
Sbjct: 151 ID-----SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYP 197
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 29/209 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+G++ VY+G LVA+K + L +GA + + E L++++H N++ + I
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 73
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLH---HSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
H LV+EY+ + L+++L +S + H+V L L Q L + Y
Sbjct: 74 -----HTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNV-KLFLFQLLR-------GLNY 119
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
H ++H DLKP N+L++ + DFGLA+ + T + S + T+
Sbjct: 120 CHRR---KVLHRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYSNEVV-TLW 169
Query: 888 YVAPEYGMGS-EASMAGDVYSFGILLLEM 915
Y P+ +GS + S D++ G + EM
Sbjct: 170 YRPPDILLGSTDYSTQIDMWGVGCIFYEM 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 70/243 (28%), Positives = 101/243 (41%), Gaps = 42/243 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEA--LRNIRHRNLIKIITI 769
+G+GS+G V G +K LNL + AE EA L ++H N I+
Sbjct: 8 VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPN---IVAY 64
Query: 770 CSSIDSHGVDFKALVYEYM---QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
S + G D L+Y M + G L +H + L Q + + IA A++
Sbjct: 65 RESWE--GED--GLLYIVMGFCEGGDL----YHKLKEQKGKLLPENQVVEWFVQIAMALQ 116
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YLH + I+H DLK NV L + VGD G+A+ L Q D T + GT
Sbjct: 117 YLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN-QCDMAST------LIGTP 166
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA---MKALPQR 943
Y++PE + DV++ G + EM K H F M +L R
Sbjct: 167 YYMSPELFSNKPYNYKSDVWALGCCVYEMATLK-------------HAFNAKDMNSLVYR 213
Query: 944 VIE 946
+IE
Sbjct: 214 IIE 216
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 40/226 (17%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA------FKSFVAECEALRNIRHRNLI 764
+G G+F Y+ + G L+AVK + R + ++ E + + H ++I
Sbjct: 7 QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY- 823
+ F V E+M GS+ L + A+ I Y
Sbjct: 67 R----MLGATCEDSHFNLFV-EWMAGGSVSHLLS---------KYGAFKE---AVIINYT 109
Query: 824 -----AIEYLHHHCQPPIIHGDLKPSNVLLD---HDMVAHVGDFGLAKFLYTCQVDDVET 875
+ YLH + IIH D+K +N+L+D + + DFG A L E
Sbjct: 110 EQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRL--RIADFGAAARLAAKGTGAGEF 164
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+G T+ ++APE G + + DV+S G +++EM K P
Sbjct: 165 QGQLLG---TIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP 207
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A +I +E LH I++ DLKP N+LLD + D GLA VE P
Sbjct: 108 AAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLA----------VEIPE 154
Query: 878 SSI--GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
G GTVGY+APE + + D + G L+ EM K P
Sbjct: 155 GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 4e-07
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 40/231 (17%)
Query: 705 EFSTSN---MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHR 761
E+ + ++G+G++G VY + +A+K + + E ++HR
Sbjct: 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHR 65
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS----NDQHDVCDLSLIQRLHI 817
N+++ + S F + E + GSL L D Q
Sbjct: 66 NIVQYLGSDSE-----NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQ---- 116
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETP 876
I ++YLH + I+H D+K NVL++ + V + DFG +K L P
Sbjct: 117 ---ILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN------P 164
Query: 877 SSSIGIKGTVGYVAPEY------GMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ GT+ Y+APE G G+ A D++S G ++EM K P
Sbjct: 165 CTET-FTGTLQYMAPEVIDKGPRGYGAPA----DIWSLGCTIVEMATGKPP 210
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 4e-07
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+G+G++ V++G LVA+K + L +GA + + E L++++H N++ + I
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV 73
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI-DIAYAIEYLH 829
+ S LV+EY+ + L++++ D ++ + + I + I + Y H
Sbjct: 74 HTDKS-----LTLVFEYL-DKDLKQYMD------DCGNIMSMHNVKIFLYQILRGLAYCH 121
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
++H DLKP N+L++ + DFGLA+ V T + S + T+ Y
Sbjct: 122 RR---KVLHRDLKPQNLLINERGELKLADFGLAR------AKSVPTKTYSNEVV-TLWYR 171
Query: 890 APEYGMG-SEASMAGDVYSFGILLLEM 915
P+ +G SE S D++ G + EM
Sbjct: 172 PPDVLLGSSEYSTQIDMWGVGCIFFEM 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 4e-07
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITI 769
IG+G++G V++ E +VA+K + L +G S + E L+ ++H+N++++ +
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQ--HDVCDLSLIQRLHIAIDIAYAIEY 827
H LV+EY L+++ N ++ + Q L + +
Sbjct: 68 L-----HSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLK-------GLAF 114
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
H H ++H DLKP N+L++ + + DFGLA+
Sbjct: 115 CHSH---NVLHRDLKPQNLLINKNGELKLADFGLAR 147
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 5e-07
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
+ + I A+ YL +IH D+KPSN+LLD + DFG++ L VD
Sbjct: 118 KMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRL----VDSKAK 171
Query: 876 PSSSIGIKGTVGYVAPEY----GMGSEASMAGDVYSFGILLLEM 915
S G Y+APE + + DV+S GI L+E+
Sbjct: 172 TRS----AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVEL 211
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 5e-07
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 28/160 (17%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A +IA + +LH II+ DLK NV+LD + + DFG+ K +++
Sbjct: 107 AAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCK-------ENIFGGK 156
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL--TIHEF 935
++ GT Y+APE + D ++FG+LL EM + P D D L +I E
Sbjct: 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH 216
Query: 936 AM---KALPQRVIEIVDPLLLLEVRTNNSKNP-----CGD 967
+ K+L + + I LL +K+P CG
Sbjct: 217 NVSYPKSLSKEAVSICKGLL--------TKHPAKRLGCGP 248
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 6e-07
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 809 LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
L L Q +A + AI+Y+H + IIH D+K NVL++ +GDFG A F
Sbjct: 257 LGLAQVTAVARQLLSAIDYIH--GEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927
TP GI GTV APE G + + D++S G+++ E + T S+F+
Sbjct: 314 W----STPFH-YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVH---TASLFS 364
|
Length = 461 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 8e-07
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 45/234 (19%)
Query: 705 EFSTSNMIGQGSFG--FVYRGILG-EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHR 761
F ++G G++G F+ R + G + G L A+KVL +K A E R R
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVL---QKAALVQKAKTVEHTRT--ER 55
Query: 762 NLIKIITICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
N+++ + + + F+ L+ +Y+ G E + H L QR +
Sbjct: 56 NVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGG--EMFTH------------LYQRDN 101
Query: 817 IAID--------IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
+ D I A+E+LH + I++ D+K N+LLD + + DFGL+K +
Sbjct: 102 FSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS- 157
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
E + GT+ Y+APE G A D +S GIL+ E+ P
Sbjct: 158 -----EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASP 206
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 9e-07
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 719 FVYRGILGEGGLLVAVKVLNLTRKGAFK---SFVAECEALRNIRHRNLIKI----ITICS 771
+Y+GI V ++ KG E + LR I N++KI I I
Sbjct: 35 SIYKGIFN--NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD 92
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ +L+ EY G L E L ++ DLS +L +AID + L+ +
Sbjct: 93 DLPR-----LSLILEYCTRGYLREVL--DKEK----DLSFKTKLDMAIDCCKGLYNLYKY 141
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
P + +L + L+ + + GL K L + +V + Y +
Sbjct: 142 TNKP--YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF----------MVYFSY 189
Query: 892 EY--GMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
+ + SE ++ D+YS G++L E+F K P +++
Sbjct: 190 KMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL 225
|
Length = 283 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-06
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 256 LIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSR 315
L G +P DI L L + ++ N+ G IP S + ++L +LDL+ N F+G +P + +
Sbjct: 430 LRGFIPNDIS-KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ 488
Query: 316 LQNLSWLLLAGNNL 329
L +L L L GN+L
Sbjct: 489 LTSLRILNLNGNSL 502
|
Length = 623 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG--AFKSFVAECEALRNIRHRN 762
+F ++G+G++G V + E +VA+K + + ++ + E + LR ++ N
Sbjct: 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN 61
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
I+ + + G + LV+EY++ LE N S I +L
Sbjct: 62 ---IVELKEAFRRRGKLY--LVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQL------I 110
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
AI + H + I+H D+KP N+L+ H+ V + DFG A+ L + ++
Sbjct: 111 KAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSE------GSNANYTEY 161
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
T Y +PE +G+ A D++S G +L E+
Sbjct: 162 VATRWYRSPELLLGAPYGKAVDMWSVGCILGEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-06
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 837 IHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT----VGYVAPE 892
IH DL N+LL H + + DFGLA+ D+ S+ + +KG V ++APE
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLAR--------DIRNDSNYV-VKGNARLPVKWMAPE 286
Query: 893 YGMGSEASMAGDVYSFGILLLEMF------IRKRPTDSMF 926
+ DV+S+GILL E+F P DS F
Sbjct: 287 SIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKF 326
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 1e-06
Identities = 61/250 (24%), Positives = 98/250 (39%), Gaps = 54/250 (21%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNI---R 759
+F + +IG+G+FG V + G + A+K L RK K VA A R+I
Sbjct: 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKL---RKSEMLEKEQVAHVRAERDILAEA 58
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSND-QHDVCDLSLIQRLHIA 818
+ + S D ++ L+ EY+ G + L + + R +IA
Sbjct: 59 DNPWV-VKLYYSFQDE---NYLYLIMEYLPGGDMMTLLMKKDTFTEEE------TRFYIA 108
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY------------ 866
+ AI+ +H IH D+KP N+LLD + DFGL L
Sbjct: 109 -ETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILS 164
Query: 867 ----TCQVDDVETPSSSIG---------------IKGTVGYVAPEYGMGSEASMAGDVYS 907
+ +D + P SS GT Y+APE + + + D +S
Sbjct: 165 HALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWS 224
Query: 908 FGILLLEMFI 917
G+++ EM +
Sbjct: 225 LGVIMYEMLV 234
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 41/232 (17%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN----LTRKGAFKSFVAECEALRNIRH 760
+F +IG+G+FG V + + A+K+LN L R AE R
Sbjct: 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKR--------AETACFR--EE 51
Query: 761 RNLIKIITICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
RN++ + C I + F+ LV +Y G L L D+ D++ R
Sbjct: 52 RNVL-VNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPE-DMA---RF 106
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC-QVDDVE 874
+IA ++ AI +H Q +H D+KP NVLLD + + DFG +C +++
Sbjct: 107 YIA-EMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFG------SCLKMNQDG 156
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAG-----DVYSFGILLLEMFIRKRP 921
T SS+ + GT Y++PE E M D +S G+ + EM + P
Sbjct: 157 TVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 1e-06
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 26/174 (14%)
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ N IK+ +++ H L+ +Y+++G L + L LS + I
Sbjct: 68 NPNFIKLYYSVTTLKGH-----VLIMDYIKDGDLFDLLKKEGK------LSEAEVKKIIR 116
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV-AHVGDFGLAKFLYTCQVDDVETPSS 878
+ A+ LH H IIH D+K NVL D ++ D+GL K + T D
Sbjct: 117 QLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYD------ 167
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932
GT+ Y +PE G ++ D ++ G+L E+ K P ++ L +
Sbjct: 168 -----GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL 216
|
Length = 267 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 24/207 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHR-NLIKIIT 768
IG+GSFG V + + + A+K + RK +S V A R + + N I+
Sbjct: 1 IGKGSFGKVMQVRKRDTQRIYALKTI---RKAHIVSRSEVTHTLAERTVLAQVNCPFIVP 57
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ S S + LV ++ G L HH Q + R + A ++ A+E L
Sbjct: 58 LKFSFQSPEKLY--LVLAFINGGEL---FHHL--QREGRFDLSRARFYTA-ELLCALENL 109
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H + +I+ DLKP N+LLD+ + DFGL K L D T GT Y
Sbjct: 110 H---KFNVIYRDLKPENILLDYQGHIALCDFGLCK-LNMKDDDKTNT------FCGTPEY 159
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEM 915
+APE +G + A D ++ G+LL EM
Sbjct: 160 LAPELLLGHGYTKAVDWWTLGVLLYEM 186
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 2e-06
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 50/230 (21%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN------LTRKGAFKSFVAECEALRNIR 759
+++ +G G++G V I G VA+K L+ + K A++ E L++++
Sbjct: 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYR----ELTLLKHMQ 72
Query: 760 HRNLIKIITICSSIDS-HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
H N+I ++ + +S S LV YMQ DL I ++
Sbjct: 73 HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-----------------DLQKIMGHPLS 115
Query: 819 ID-IAYAI-------EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQV 870
D + Y + +Y+H IIH DLKP N+ ++ D + DFGLA+
Sbjct: 116 EDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHA----- 167
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRK 919
D E G T Y APE + + D++S G ++ EM K
Sbjct: 168 -DAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 787 YMQNGSLEEWLHHSNDQHDVCD--LSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKP 843
+++ SL + +Q D+ L+L + + +A +E+L C IH DL
Sbjct: 152 FVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKC----IHRDLAA 207
Query: 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG 903
N+LL + V + DFGLA+ +Y D V + + +K ++APE ++
Sbjct: 208 RNILLSENNVVKICDFGLARDIYK-DPDYVRKGDARLPLK----WMAPETIFDRVYTIQS 262
Query: 904 DVYSFGILLLEMF 916
DV+SFG+LL E+F
Sbjct: 263 DVWSFGVLLWEIF 275
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 3e-06
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 58/233 (24%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN--------LTRKGAFKSFVAECEALRNIRHRN 762
+IG+GS+G V I G VA+K +N TR + E + LR +RH +
Sbjct: 7 VIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATR------ILREIKLLRLLRHPD 60
Query: 763 LIKIITICSSIDSHGVDFKAL--VYEYMQNGSLEEWLHH---SNDQHDVCDLS------- 810
+++I I + +FK + V+E M E LH +ND DL+
Sbjct: 61 IVEIKHIM--LPPSRREFKDIYVVFELM-----ESDLHQVIKAND-----DLTPEHHQFF 108
Query: 811 LIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQV 870
L Q L A++Y+H + H DLKP N+L + D + DFGLA+ +
Sbjct: 109 LYQLLR-------ALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN--- 155
Query: 871 DDVETPSSSIGIK--GTVGYVAPEY--GMGSEASMAGDVYSFGILLLEMFIRK 919
+TP++ T Y APE S+ + A D++S G + E+ K
Sbjct: 156 ---DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 19/133 (14%)
Query: 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842
LV ++ + G L W H S + + ++R A ++ A++ LH + I+ DL
Sbjct: 62 LVLQHAEGGKL--WSHISKFLNIPEEC--VKRW--AAEMVVALDALH---REGIVCRDLN 112
Query: 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMA 902
P+N+LLD G + Y + +VE ++ Y APE G SE + A
Sbjct: 113 PNNILLDDR--------GHIQLTYFSRWSEVEDSCDGEAVENM--YCAPEVGGISEETEA 162
Query: 903 GDVYSFGILLLEM 915
D +S G +L E+
Sbjct: 163 CDWWSLGAILFEL 175
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 3e-06
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 837 IHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG 896
IH DL N+LL + V + DFGLA+ +Y D V + + +K ++APE
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYK-DPDYVRKGDARLPLK----WMAPESIFD 249
Query: 897 SEASMAGDVYSFGILLLEMF 916
+ DV+SFG+LL E+F
Sbjct: 250 KVYTTQSDVWSFGVLLWEIF 269
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 3e-06
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
+ N+IG GSFG VY I + VA+K + + +K+ E ++N+ H N+I
Sbjct: 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIK--KVLQDPQYKN--RELLIMKNLNHINIIF 123
Query: 766 I----ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
+ T C + + F +V E++ + H++ + H L L + +
Sbjct: 124 LKDYYYTECFKKNEKNI-FLNVVMEFIPQTVHKYMKHYARNNH---ALPLFLVKLYSYQL 179
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
A+ Y+H I H DLKP N+L+D + + DFG AK L Q S+
Sbjct: 180 CRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ--------RSV 228
Query: 881 GIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFI 917
+ Y APE +G+ + D++S G ++ EM +
Sbjct: 229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMIL 266
|
Length = 440 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A ++ +E L + I++ DLKP N+LLD + D GLA Q+ + ET
Sbjct: 108 AAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLA-----VQIPEGETVR 159
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ GTVGY+APE + + + D + G L+ EM + P
Sbjct: 160 GRV---GTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN----LTRKGAFKSFVAECEAL-RNIRHRNLIK 765
+IG+GSFG V G AVKVL L RK K +AE L +N++H L+
Sbjct: 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQ-KHIMAERNVLLKNVKHPFLVG 60
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ + V +++ G L H + + R + A +IA A+
Sbjct: 61 L-----HYSFQTTEKLYFVLDFVNGGEL---FFHLQRERSFPEPR--ARFYAA-EIASAL 109
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YLH I++ DLKP N+LLD + DFGL K + + ++ GT
Sbjct: 110 GYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCK-------EGIAQSDTTTTFCGT 159
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
Y+APE D + G +L EM
Sbjct: 160 PEYLAPEVIRKQPYDNTVDWWCLGAVLYEML 190
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A +IA + +LH II+ DLK NV+LD + + DFG+ K D V T +
Sbjct: 107 AAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENMWDGVTTKT 160
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFNDGLTI 932
GT Y+APE + D ++FG+LL EM + P D +F +
Sbjct: 161 ----FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH 216
Query: 933 HEFAMKALPQRVIEIVDPLL 952
+ K++ + + I L+
Sbjct: 217 NVAYPKSMSKEAVAICKGLM 236
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 4e-06
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A I EYL I++ DLKP N+LLD D + DFG AK V+T +
Sbjct: 137 AAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV--------VDTRT 185
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
++ GT Y+APE + A D ++ GI + E+ +
Sbjct: 186 YTLC--GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV 223
|
Length = 340 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 4e-06
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 44/226 (19%)
Query: 712 IGQGSFGFV--YRGILGEGGLLVAVK-VLNL-TRKGAFKSFVAECEALRNIR-HRNLIKI 766
+GQG++G V R VA+K + N+ ++K K + E + LR+ R H+N+ +
Sbjct: 8 LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL 67
Query: 767 ITICSSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSNDQHDVCDLSLI----QRL---HI 817
D V +Y Y + L E DL I Q L H
Sbjct: 68 Y------DMDIVFPGNFNELYLYEE---LME-----------ADLHQIIRSGQPLTDAHF 107
Query: 818 A---IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
I ++Y+H ++H DLKP N+L++ D + DFGLA+ + E
Sbjct: 108 QSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR---GFSENPGE 161
Query: 875 TPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRK 919
T Y APE + + A DV+S G +L E+ RK
Sbjct: 162 NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK 207
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 837 IHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG 896
IH DL N+LL + V + DFGLA+ +Y D V S+ + +K ++APE
Sbjct: 196 IHRDLAARNILLSENNVVKICDFGLARDIYK-DPDYVRKGSARLPLK----WMAPESIFD 250
Query: 897 SEASMAGDVYSFGILLLEMF 916
+ DV+SFG+LL E+F
Sbjct: 251 KVYTTQSDVWSFGVLLWEIF 270
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 4e-06
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 440 LGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV---SQNKL-TGALPKQIFNITTLS 495
L L EL+L N L + L + SL + N L L + L
Sbjct: 77 LTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLP 136
Query: 496 LYL---DLSNNFLN----DSLPLEVGNLQNLVELDISRNQVSGE-IPAT---LSACTSLE 544
L L N L ++L + ++L EL+++ N + I A L A +LE
Sbjct: 137 PALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLE 196
Query: 545 YLNLSYNSFR--GGIPLS--LSSLKSVKVLDLSSNNLS 578
L+L+ N G L+ L+SLKS++VL+L NNL+
Sbjct: 197 VLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 5e-06
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 28/190 (14%)
Query: 731 LVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSID-----SHGVDFKALVY 785
L+A +V +R E AL + H N++KI I S + DF +Y
Sbjct: 195 LIAKRVKAGSRAAIQ--LENEILALGRLNHENILKIEEILRSEANTYMITQKYDFD--LY 250
Query: 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSN 845
+M + + + W L Q I + A+EY+H +IH D+K N
Sbjct: 251 SFMYDEAFD-WKDRP---------LLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLEN 297
Query: 846 VLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDV 905
+ L+ D +GDFG T + E + G GTV +PE G D+
Sbjct: 298 IFLNCDGKIVLGDFG------TAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDI 351
Query: 906 YSFGILLLEM 915
+S G++LL+M
Sbjct: 352 WSCGLILLDM 361
|
Length = 501 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 5e-06
Identities = 68/250 (27%), Positives = 107/250 (42%), Gaps = 63/250 (25%)
Query: 692 PIVSYAELSKATGE----FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS 747
P EL+K E + + +G G++G V + GL VAVK L+R F+S
Sbjct: 1 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK--KLSR--PFQS 56
Query: 748 FV------AECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN 801
+ E L++++H N+I ++ + + SLEE+ N
Sbjct: 57 IIHAKRTYRELRLLKHMKHENVIGLLDV-----------------FTPARSLEEF----N 95
Query: 802 DQHDV-----CDLSLI---QRL---HIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVL 847
D + V DL+ I Q+L H+ I ++Y+H IIH DLKPSN+
Sbjct: 96 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLA 152
Query: 848 LDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVY 906
++ D + DFGLA+ DD T G T Y APE + + D++
Sbjct: 153 VNEDCELKILDFGLAR-----HTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTVDIW 202
Query: 907 SFGILLLEMF 916
S G ++ E+
Sbjct: 203 SVGCIMAELL 212
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 5e-06
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
A ++ A+ +LH H +I+ DLK N+LLD + + DFG+ K + +
Sbjct: 102 AAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCK-------EGILNGV 151
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL 930
++ GT Y+APE E + D ++ G+L+ EM + P ++ D L
Sbjct: 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL 204
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 5e-06
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 518 NLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
NL LD+S N+++ +L+ L+LS N+ P + S L S++ LDLS NNL
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 6e-06
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKIITIC 770
+G+G++G VY+ + G+ +A+K + L + F + E + L H+ + I
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDIL----HKAVSPYI--- 61
Query: 771 SSIDSHGVDF-KALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+D +G F + VY EYM GSL++ L+ + +++R I + ++
Sbjct: 62 --VDFYGAFFIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRR--ITYAVVKGLK 116
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
+L IIH D+KP+NVL++ + + DFG++ L ++IG +
Sbjct: 117 FLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA------SLAKTNIGCQ--- 165
Query: 887 GYVAPEYGMGSEASMAG------DVYSFGILLLEMFIRKRP 921
Y+APE + DV+S G+ +LEM + + P
Sbjct: 166 SYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP 206
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 6e-06
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 773 IDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DIAYA 824
I H DFK+ L+ EY G L + + +H Q + + I A
Sbjct: 127 IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEH-----LPFQEYEVGLLFYQIVLA 181
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
++ +H ++H DLK +N+ L + +GDFG +K Q D + + G
Sbjct: 182 LDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSK-----QYSDSVSLDVASSFCG 233
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T Y+APE S D++S G++L E+ RP
Sbjct: 234 TPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP 270
|
Length = 478 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 7e-06
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F +IG+G+FG V + G + A+K+LN + ++ F E + L N R
Sbjct: 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRR 61
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
I + + + LV +Y G L L D D++ R ++A ++
Sbjct: 62 ---WITNLHYAFQDE--NNLYLVMDYYVGGDLLTLLSKFED-RLPEDMA---RFYLA-EM 111
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTC-QVDDVETPSS 878
AI+ +H Q +H D+KP NVLL D H+ DFG +C ++ T S
Sbjct: 112 VLAIDSVH---QLGYVHRDIKPDNVLL--DKNGHIRLADFG------SCLRLLADGTVQS 160
Query: 879 SIGIKGTVGYVAPEY------GMGSEASMAGDVYSFGILLLEMFIRKRP 921
++ + GT Y++PE G G D +S G+ + EM + P
Sbjct: 161 NVAV-GTPDYISPEILQAMEDGKGRYGPEC-DWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 7e-06
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F +IG+G+FG V L + A+K+LN + ++ F E + L N ++
Sbjct: 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQ 61
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQ--HDVCDLSLIQRLHIAI 819
I T+ + + LV +Y G L L D+ D+ L + + IAI
Sbjct: 62 ---WITTLHYAFQDENNLY--LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV-IAI 115
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC-QVDDVETPSS 878
D + + Y+H D+KP N+L+D + + DFG +C ++ + T S
Sbjct: 116 DSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFG------SCLKLMEDGTVQS 160
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAG-----DVYSFGILLLEMFIRKRP 921
S+ + GT Y++PE E D +S G+ + EM + P
Sbjct: 161 SVAV-GTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 7e-06
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 59/233 (25%)
Query: 712 IGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRK------GAFKSFVAECEALRNIRHRN 762
+GQG+F +Y+G+L + ++ + +++ K +F + + H++
Sbjct: 3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
L+K+ +C D +V EY++ G L+ +L H + +SL +L +A +A
Sbjct: 63 LVKLYGVCVR------DENIMVEEYVKFGPLDVFL-HREKNN----VSLHWKLDVAKQLA 111
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI-- 880
A+ YL ++HG++ N+L+ + E I
Sbjct: 112 SALHYLEDK---KLVHGNVCGKNILV-------------------ARYGLNEGYVPFIKL 149
Query: 881 ---GIKGTVG----------YVAPEY--GMGSEASMAGDVYSFGILLLEMFIR 918
GI TV ++APE + ++A D +SFG LLE+
Sbjct: 150 SDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN 202
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 8e-06
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+F IG G++G VY+ G L A+KV+ L F E +++ +H N++
Sbjct: 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIV 69
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
D + E+ GSL++ H + LS Q +++ +
Sbjct: 70 AYFGSYLRRDKLWICM-----EFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQG 118
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ YLH + +H D+K +N+LL + + DFG+ + Q+ T + G
Sbjct: 119 LYYLHSKGK---MHRDIKGANILLTDNGHVKLADFGV-----SAQIT--ATIAKRKSFIG 168
Query: 885 TVGYVAPEYGMGSEA---SMAGDVYSFGILLLEM 915
T ++APE + D+++ GI +E+
Sbjct: 169 TPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 699 LSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI 758
L T + IG+G++G VY+ + G L AVK+L+ + AE L+++
Sbjct: 17 LGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSL 75
Query: 759 -RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
H N++K + D LV E GS+ E + L QRL
Sbjct: 76 PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGL--------LICGQRLDE 127
Query: 818 AIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
A+ I+Y A+ L H IIH D+K +N+LL + + DFG++ L + ++
Sbjct: 128 AM-ISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--- 183
Query: 874 ETPSSSIGIKGTVGYVAPE-------YGMGSEASMAGDVYSFGILLLEM 915
++S+ GT ++APE Y +A DV+S GI +E+
Sbjct: 184 -RRNTSV---GTPFWMAPEVIACEQQYDYSYDARC--DVWSLGITAIEL 226
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 2e-05
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 809 LSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867
L+ + L +A +E+L +C +H DL NVLL + + DFGLA+
Sbjct: 234 LTTLDLLSFTYQVARGMEFLASKNC----VHRDLAARNVLLAQGKIVKICDFGLAR---- 285
Query: 868 CQVDDVETPSSSIGIKGT---VGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
D+ S+ + T V ++APE + + DV+S+GILL E+F
Sbjct: 286 ----DIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIF 333
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 44/228 (19%)
Query: 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKGAF-KSFVAECEALRNIRH 760
T + +G G+FG V G VA+K ++ K E + L+++RH
Sbjct: 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH 68
Query: 761 RNLIKI--ITICSSIDSH------GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
N+I + I I D + G D L + + LE+ I
Sbjct: 69 ENIISLSDIFISPLEDIYFVTELLGTDLHRL----LTSRPLEK--------------QFI 110
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
Q + I ++Y+H ++H DLKPSN+L++ + + DFGLA+
Sbjct: 111 Q--YFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLAR--------- 156
Query: 873 VETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRK 919
++ P + G T Y APE + + + D++S G + EM K
Sbjct: 157 IQDPQMT-GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 24/147 (16%)
Query: 720 VYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI--KIITICSSIDSHG 777
VY LG +K+ KGA E L+ + + L K++ S
Sbjct: 14 VYL--LGTKDEDYVLKINPSREKGAD--REREVAILQLLARKGLPVPKVLASGESDGWS- 68
Query: 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPII 837
L+ E+++ +L+E +S ++ IA +A + LH +
Sbjct: 69 ----YLLMEWIEGETLDE-------------VSEEEKEDIAEQLAELLAKLHQLPLLVLC 111
Query: 838 HGDLKPSNVLLDHDMVAHVGDFGLAKF 864
HGDL P N+L+D + + D+ A +
Sbjct: 112 HGDLHPGNILVDDGKILGIIDWEYAGY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 3e-05
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFV------AECEALRNIRHRNLIK 765
+G G++G V VAVK L+R F+S + E L++++H N+I
Sbjct: 23 VGSGAYGSVCSAYDTRLRQKVAVK--KLSR--PFQSLIHARRTYRELRLLKHMKHENVIG 78
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
++ + + S +F LV M D +++ + H+ I
Sbjct: 79 LLDVFTPATS-IENFNEVYLVTNLM-----------GADLNNIVKCQKLSDEHVQFLIYQ 126
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ L + IIH DLKPSNV ++ D + DFGLA+ Q DD T G
Sbjct: 127 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADDEMT-----GYV 176
Query: 884 GTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMF 916
T Y APE + + D++S G ++ E+
Sbjct: 177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 210
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 5e-05
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 65/228 (28%)
Query: 712 IGQGSFGFV---YRGILGEGGLLVAVKVL-----NLTR-KGAFKSFVAECEALRNIRHRN 762
IG G+ G V Y IL VA+K L N T K A++ V ++ + H+N
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 84
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH---DVCDLSLIQRLHIAI 819
+I ++ + + SLEE+ D + ++ D +L Q + + +
Sbjct: 85 IIGLLNV-----------------FTPQKSLEEF----QDVYIVMELMDANLCQVIQMEL 123
Query: 820 D---IAY-------AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQ 869
D ++Y I++LH IIH DLKPSN+++ D + DFGLA+ T
Sbjct: 124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG 177
Query: 870 VDDVETPSSSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGILLLEM 915
+ TP T Y APE GMG + ++ D++S G ++ EM
Sbjct: 178 TSFMMTPYVV-----TRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 6e-05
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 65/232 (28%)
Query: 712 IGQGSFGFV---YRGILGEGGLLVAVKVL-----NLTR-KGAFKSFVAECEALRNIRHRN 762
IG G+ G V Y +L VA+K L N T K A++ V ++ + H+N
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVL----MKCVNHKN 77
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH---DVCDLSLIQRLHIAI 819
+I ++ + + SLEE+ D + ++ D +L Q + + +
Sbjct: 78 IISLLNV-----------------FTPQKSLEEF----QDVYLVMELMDANLCQVIQMEL 116
Query: 820 D---IAY-------AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQ 869
D ++Y I++LH IIH DLKPSN+++ D + DFGLA+ T
Sbjct: 117 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAG 170
Query: 870 VDDVETPSSSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGILLLEMFIRK 919
+ TP T Y APE GMG + ++ D++S G ++ EM K
Sbjct: 171 TSFMMTPYVV-----TRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 6e-05
Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 51/223 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK---SFVAECEA--LRNIRHRNLIK- 765
+G+GSFG VY + +KVL G + A EA L + H ++K
Sbjct: 8 LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKF 67
Query: 766 -----------IIT-ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQ 813
IIT C D +D K + E G ++ VC+ IQ
Sbjct: 68 HASFLERDAFCIITEYCEGRD---LDCK--LEELKHTGKTLS-------ENQVCEW-FIQ 114
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY-TCQVDD 872
L + Y+H Q I+H DLK N+ L ++++ +GDFG+++ L +C D
Sbjct: 115 LL-------LGVHYMH---QRRILHRDLKAKNIFLKNNLL-KIGDFGVSRLLMGSC---D 160
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ T GT Y++PE D++S G +L EM
Sbjct: 161 LATT-----FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 7e-05
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
++ +G G++G VY+ G L AVK++ L F E ++ +H N++
Sbjct: 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIV 69
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
S + + EY GSL++ H + LS +Q ++ +
Sbjct: 70 AYFGSYLSREKLWI-----CMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQG 118
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ YLH + +H D+K +N+LL + + DFG+A + T + G
Sbjct: 119 LAYLHSKGK---MHRDIKGANILLTDNGDVKLADFGVAAKI-------TATIAKRKSFIG 168
Query: 885 TVGYVAPEYGMGSEA---SMAGDVYSFGILLLEM 915
T ++APE + + D+++ GI +E+
Sbjct: 169 TPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 9e-05
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 542 SLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHF 601
+L+ L+LS N + L ++KVLDLS NNL+ P+ L L L++S N+
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 9e-05
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 49/250 (19%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+F + +IG+G+FG V + G + A+K+L K+ + E E + +IR I
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILR-------KADMLEKEQVAHIRAERDI 54
Query: 765 KIITICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ + + F+ L+ E++ G + L + + I +AI
Sbjct: 55 LVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAI 114
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD-----VE 874
D + + + IH D+KP N+LLD + DFGL L +
Sbjct: 115 DAIHQLGF---------IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTH 165
Query: 875 TPSSSIGIK-----------------------GTVGYVAPEYGMGSEASMAGDVYSFGIL 911
P S + GT Y+APE M + + D +S G++
Sbjct: 166 NPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVI 225
Query: 912 LLEMFIRKRP 921
+ EM I P
Sbjct: 226 MYEMLIGYPP 235
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-04
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF--------L 865
R++ A + A+EYLH++ I+H DLKP N+L+ + DFGL+K L
Sbjct: 104 RMYFA-ETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
Y ++ + GT Y+APE + D ++ GI+L E +
Sbjct: 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV 211
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-04
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 40/144 (27%)
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-FLYT----- 867
R +IA ++ AIE +H + IH D+KP N+L+D D + DFGL F +T
Sbjct: 104 RFYIA-ELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159
Query: 868 ------CQVDDVETPS-----SSIGIK-------------------GTVGYVAPEYGMGS 897
+ D +E +K GT Y+APE + +
Sbjct: 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT 219
Query: 898 EASMAGDVYSFGILLLEMFIRKRP 921
+ D +S G++L EM + + P
Sbjct: 220 GYTQLCDWWSVGVILYEMLVGQPP 243
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 2e-04
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
L+ L +++N LT + L LKV+++ N L+ P L + L+++GN
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|225213 COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 5e-04
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 792 SLEEW-LHHSNDQHDVCDLS-LIQRLHIAIDIAYAIEYLHHH---CQPPIIHGDLKPSNV 846
EW + + + R + + + L H IIHGDL P NV
Sbjct: 150 RRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNV 209
Query: 847 LLDHD-MVAHVGDFG 860
L D D V+ DF
Sbjct: 210 LFDDDTDVSGFIDFD 224
|
Length = 331 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 6e-04
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 290 SNTSNLVMLDLNLNL--FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCS 347
S + L L+ G +P + S+L++L + L+GN++ L IT L
Sbjct: 413 STKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLE--- 469
Query: 348 KLIALGLYGNRFGGVLPHSIANLSTTTVQI-NMGRNQISGTIPSGIG 393
L L N F G +P S+ L T+++I N+ N +SG +P+ +G
Sbjct: 470 ---VLDLSYNSFNGSIPESLGQL--TSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 6e-04
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 421 NLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKL 480
NL+ L L N L + L L L+L N L P + SL SL++S N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 6e-04
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 56/223 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-------HRNLI 764
IG+G+F V + + G A+K + K FKS + + LR I+ H N++
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCM----KKHFKS-LEQVNNLREIQALRRLSPHPNIL 61
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWL---HHSNDQHDVCDLSLIQRLHIAIDI 821
++I + + + ALV+E M + +L E + + V +
Sbjct: 62 RLIEVLFDRKTGRL---ALVFELM-DMNLYELIKGRKRPLPEKRV--------KSYMYQL 109
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+++++H + I H D+KP N+L+ D++ + DFG + +Y+ P +
Sbjct: 110 LKSLDHMHRN---GIFHRDIKPENILIKDDIL-KLADFGSCRGIYS-------KPPYTEY 158
Query: 882 IKGTVGYVAPE---------YGMGSEASMAGDVYSFGILLLEM 915
I T Y APE M D+++ G + E+
Sbjct: 159 I-STRWYRAPECLLTDGYYGPKM--------DIWAVGCVFFEI 192
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 6e-04
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 809 LSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867
LS + + + +A +E+L +C +H DL NVL+ + + DFGLA+
Sbjct: 236 LSYMDLVGFSYQVANGMEFLASKNC----VHRDLAARNVLICEGKLVKICDFGLAR---- 287
Query: 868 CQVDDVETPSSSIGIKGT----VGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
D+ S+ I KG+ + ++APE + + DV+SFGILL E+F
Sbjct: 288 ----DIMRDSNYIS-KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIF 335
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 7e-04
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 711 MIGQGSFGFVYRGILGEGGL---LVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKI 766
++G+GSFG R +L + A+K + L + A + E L ++H N I
Sbjct: 7 VVGEGSFG---RALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPN---I 60
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ S ++ G + +V EY G L + + + D L + + ++
Sbjct: 61 VAFKESFEADGHLY--IVMEYCDGGDLMQKIKLQRGKLFPEDTIL----QWFVQMCLGVQ 114
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----YTCQVDDVETPSSSIG 881
++H + ++H D+K N+ L + +GDFG A+ L Y C V TP
Sbjct: 115 HIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY--VGTPY---- 165
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
YV PE + D++S G +L E+ K P
Sbjct: 166 ------YVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP 199
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 0.001
Identities = 63/249 (25%), Positives = 97/249 (38%), Gaps = 47/249 (18%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNI--RH 760
+F + +IG+G+FG V + G + A+K+L RK K V A R+I
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKIL---RKADMLEKEQVGHIRAERDILVEA 58
Query: 761 RNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
+L + S D + L+ E++ G + L + D Q +IA +
Sbjct: 59 DSLWVVKMFYSFQDKLNL---YLIMEFLPGGDMMTLLM----KKDTLTEEETQ-FYIA-E 109
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV------E 874
AI+ +H Q IH D+KP N+LLD + DFGL L +
Sbjct: 110 TVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHS 166
Query: 875 TPSS----------------------SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
PS + GT Y+APE M + + D +S G+++
Sbjct: 167 LPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226
Query: 913 LEMFIRKRP 921
EM I P
Sbjct: 227 YEMLIGYPP 235
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 804 HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
D+ + + ++ L ++ +I + LH IIHGDL SN++L + ++ DFGLA+
Sbjct: 87 KDLINSNGMEELELSREIGRLVGKLHSA---GIIHGDLTTSNMILSGGKI-YLIDFGLAE 142
Query: 864 F 864
F
Sbjct: 143 F 143
|
Length = 211 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.002
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 270 KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
L + ++ N + +F NL +LDL+ N + P FS L +L L L+GNNL
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.002
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 497 YLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSF 553
LDLSNN L +P L NL LD+S N ++ P S SL L+LS N+
Sbjct: 4 SLDLSNNRL-TVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.002
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 36/220 (16%)
Query: 712 IGQGSFGFVYRGILG------------EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR 759
+G+G+ +Y GIL E + V +KVL+ + + +F +R +
Sbjct: 3 LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
H++++ + +C D + +V E+++ G L+ ++H +D L+ + +A
Sbjct: 63 HKHIVLLYGVCVR-DVENI----MVEEFVEFGPLDLFMHRKSDV-----LTTPWKFKVAK 112
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
+A A+ YL ++HG++ N+LL + + G+ G F+ ++ D P +
Sbjct: 113 QLASALSYLE---DKDLVHGNVCTKNILLAREGID--GECG--PFI---KLSDPGIPITV 162
Query: 880 IGIKGTVG---YVAPEYGMGSEA-SMAGDVYSFGILLLEM 915
+ + V ++APE S+ S+A D +SFG L E+
Sbjct: 163 LSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.003
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 25/216 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+G++G VY+ +G + + G S E LR ++H N+I + +
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFL 68
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL--HIAIDIAYAIEYLH 829
S V L+++Y ++ H + + + L + + + I I YLH
Sbjct: 69 SHSDRKV---WLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH 125
Query: 830 HHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG---- 881
+ ++H DLKP+N+L+ + D G A+ +P +
Sbjct: 126 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF--------NSPLKPLADLDP 174
Query: 882 IKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMF 916
+ T Y APE +G+ + A D+++ G + E+
Sbjct: 175 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.003
Identities = 40/153 (26%), Positives = 56/153 (36%), Gaps = 40/153 (26%)
Query: 783 LVYEYMQNGSL----------EEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHC 832
+V EYM G L E+W R + A ++ A++ +H
Sbjct: 120 MVMEYMPGGDLVNLMSNYDIPEKW----------------ARFYTA-EVVLALDAIHSM- 161
Query: 833 QPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE 892
IH D+KP N+LLD + DFG TC D GT Y++PE
Sbjct: 162 --GFIHRDVKPDNMLLDKSGHLKLADFG------TCMKMDANGMVRCDTAVGTPDYISPE 213
Query: 893 Y----GMGSEASMAGDVYSFGILLLEMFIRKRP 921
G D +S G+ L EM + P
Sbjct: 214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.004
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 44/150 (29%)
Query: 812 IQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-FLYT--- 867
+ R +IA ++ A+E +H + IH D+KP N+L+D D + DFGL F +T
Sbjct: 102 LARFYIA-ELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157
Query: 868 -------------------------CQVDDVETPSS-----------SIGIKGTVGYVAP 891
C+ D P + + GT Y+AP
Sbjct: 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAP 217
Query: 892 EYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
E + + + D +S G++L EM + + P
Sbjct: 218 EVLLRTGYTQLCDWWSVGVILYEMLVGQPP 247
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
+ +I + LH I+HGDL SN+++ D + + DFGL K Y+ +++D
Sbjct: 92 NDELLREIGRLVGKLHKA---GIVHGDLTTSNIIVRDDKLYLI-DFGLGK--YSDEIED 144
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1019 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.98 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.98 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.98 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.98 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.98 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.95 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.94 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.93 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.9 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.9 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.9 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.89 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.89 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.88 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.85 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.84 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.84 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.82 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.8 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.8 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.8 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.79 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.79 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.78 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.78 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.77 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.77 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.76 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.74 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.74 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.73 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.71 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.7 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.7 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.69 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.66 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.65 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.65 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.64 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.56 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.55 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.55 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.53 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.52 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.48 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.47 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.39 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.38 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.38 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.35 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.33 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.32 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.3 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.25 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.23 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.16 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.14 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.11 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.11 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.07 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.07 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.06 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.05 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.05 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 99.04 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.04 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.03 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.01 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.01 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.0 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.99 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.99 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.93 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.91 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.9 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.8 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.76 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.76 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.74 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.73 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.66 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.62 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.57 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.56 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.55 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.51 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.42 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-117 Score=1128.53 Aligned_cols=922 Identities=32% Similarity=0.520 Sum_probs=783.8
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcceeeeeCCCCCeeeEEeeeccCCCCccccCcCCCcccceeccCCCcc
Q 001738 32 NETDRLALLAIKSQLHDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNF 111 (1019)
Q Consensus 32 ~~~~~~all~~k~~~~~~~~~~~sW~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~ 111 (1019)
.++|+.||++||+++.||.+.+++|+...+||.|.||+|++ .++|+.|+|++++++|.+++.+..+++|++|||++|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~ 105 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL 105 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCcc
Confidence 45899999999999988988889998888999999999985 46999999999999999999999999999999999999
Q ss_pred CCCCCcccC-CCCCcceecccCccccCCCCccccCCcchhhhhhccccccccccccccccccccceeecccccccCCCCc
Q 001738 112 YGNIPHEVG-RLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA 190 (1019)
Q Consensus 112 ~g~~p~~l~-~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~p~ 190 (1019)
+|.+|..+. ++++|++|+|++|+++|.+|. +.+++|+.|++++|.+.+.+|..++ ++++|++|+|++|.+++.+|.
T Consensus 106 ~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 106 SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred CCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHh-cCCCCCEEECccCcccccCCh
Confidence 999998876 999999999999999999986 5688999999999999999998876 689999999999999999999
Q ss_pred cccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceeccCCcccCCCCccccccccc
Q 001738 191 SIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPK 270 (1019)
Q Consensus 191 ~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~ 270 (1019)
.++++++|++|+|++|.+.+.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|.+.+.+|..+. .+++
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~ 261 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKN 261 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998766 7999
Q ss_pred cceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCCCCCCCCccccccccccch
Q 001738 271 LTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLI 350 (1019)
Q Consensus 271 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~ 350 (1019)
|+.|++++|++++.+|..+.++++|++|+|++|++.+.+|..+.++++|++|++++|.+.... +..+.++++|+
T Consensus 262 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~------~~~~~~l~~L~ 335 (968)
T PLN00113 262 LQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKI------PVALTSLPRLQ 335 (968)
T ss_pred CCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcC------ChhHhcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999987533 34467889999
Q ss_pred hhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCCchhhhcccccceeecccc
Q 001738 351 ALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430 (1019)
Q Consensus 351 ~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 430 (1019)
.|++++|++.+.+|..+..++.+. .|++++|++++.+|..+..+.+|+.|++++|++.+.+|..+..+++|+.|++++|
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~~~L~-~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n 414 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKHNNLT-VLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414 (968)
T ss_pred EEECcCCCCcCcCChHHhCCCCCc-EEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC
Confidence 999999999999999998887665 5999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhccccccccccCCCcCCCCcc
Q 001738 431 LLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510 (1019)
Q Consensus 431 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~ 510 (1019)
++++.+|..|.++++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|..+.. ..++.|++++|.+++..|
T Consensus 415 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~--~~L~~L~ls~n~l~~~~~ 492 (968)
T PLN00113 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS--KRLENLDLSRNQFSGAVP 492 (968)
T ss_pred EeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccccc--ccceEEECcCCccCCccC
Confidence 999999999999999999999999999999999999999999999999999888876532 456679999999999999
Q ss_pred ccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCc
Q 001738 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSF 590 (1019)
Q Consensus 511 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 590 (1019)
..|.++++|+.|+|++|++++.+|+.+..+++|+.|+|++|++++.+|..|..+++|+.|||++|++++.+|..+..+++
T Consensus 493 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 572 (968)
T PLN00113 493 RKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVES 572 (968)
T ss_pred hhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEccCCcCccccCCCCccCCccccccccCCcccCCcccCCCCCCCCCCCCcccceeEEeeehhhHHHHHHHHHHHHh
Q 001738 591 LEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILLGCFIVV 670 (1019)
Q Consensus 591 L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~i~~~il~~~~i~~ 670 (1019)
|++|++++|+++|.+|..+.+.++....+.|||.+|+..+....++|....... ...+.++..+++.+++++++++++
T Consensus 573 L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 650 (968)
T PLN00113 573 LVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTP--SWWFYITCTLGAFLVLALVAFGFV 650 (968)
T ss_pred cCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccc--eeeeehhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999977555556775432211 111222222222222222222223
Q ss_pred hhhhcccccccCCCCC---ccCC-C--CccCHHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchh
Q 001738 671 YARRRRFVHKSSVTSP---MEQQ-F--PIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA 744 (1019)
Q Consensus 671 ~~~rr~~~~~~~~~~~---~~~~-~--~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~ 744 (1019)
+.++|+....+..... .+.. . ..............|+..+.||+|+||.||+|++..+++.||||+++....
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-- 728 (968)
T PLN00113 651 FIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-- 728 (968)
T ss_pred HHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--
Confidence 3333221111111100 0000 0 000011222334568888999999999999999988999999999864332
Q ss_pred hHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHH
Q 001738 745 FKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824 (1019)
Q Consensus 745 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~ 824 (1019)
....|++++++++||||+++++++.+. +..++||||+++|+|.++++. ++|.++..++.|+++|
T Consensus 729 --~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~~lv~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 729 --IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGAYLIHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKA 792 (968)
T ss_pred --ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCCEEEEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHH
Confidence 123568899999999999999999876 567999999999999999952 7899999999999999
Q ss_pred HHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcch
Q 001738 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGD 904 (1019)
Q Consensus 825 L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sD 904 (1019)
++|||..+.++|+||||||+||+++.++.+++. ||.+..... .....||+.|+|||++.+..++.++|
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sD 860 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRETKDITEKSD 860 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----------CCCccccccccCcccccCCCCCcccc
Confidence 999996555699999999999999999988875 665543211 11236789999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc-hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHH
Q 001738 905 VYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR-VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIG 983 (1019)
Q Consensus 905 vwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~ 983 (1019)
||||||++|||++|+.||+..........+++.....+. ....+|+.+.... ....++..++.+++
T Consensus 861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~ 927 (968)
T PLN00113 861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV-------------SVNQNEIVEVMNLA 927 (968)
T ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC-------------CccHHHHHHHHHHH
Confidence 999999999999999999765444555666655444332 3444554442211 11234566789999
Q ss_pred hhccCCCcCchhHhHHHHHHHHHHHHHhhh
Q 001738 984 VLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013 (1019)
Q Consensus 984 ~~Cl~~dP~~RP~s~~evl~~L~~i~~~~~ 1013 (1019)
.+||+.||++|| ||+||+++|+++.+...
T Consensus 928 ~~Cl~~~P~~RP-t~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 928 LHCTATDPTARP-CANDVLKTLESASRSSS 956 (968)
T ss_pred HhhCcCCchhCc-CHHHHHHHHHHhhcccc
Confidence 999999999999 99999999999876443
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-61 Score=617.13 Aligned_cols=518 Identities=35% Similarity=0.526 Sum_probs=486.5
Q ss_pred cccceeccCCCccCCCCCcccCCCCCcceecccCccccCCCCcccc-CCcchhhhhhcccccccccccccccccccccee
Q 001738 99 SFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLS-GCSNLINFLAHGNNLVGQIAANIGYNWMRLEKL 177 (1019)
Q Consensus 99 ~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~-~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~~L 177 (1019)
.+++.|||++|+++|.+|..+..+++|++|+|++|+++|.+|..+. ++++|++|++++|++.+.+|.. .+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEE
Confidence 4789999999999999999999999999999999999999998876 9999999999999999999874 46899999
Q ss_pred ecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceeccCCccc
Q 001738 178 SIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLI 257 (1019)
Q Consensus 178 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 257 (1019)
+|++|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|+|++|++++.+|..++++++|++|+|++|++.
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCCCCCCC
Q 001738 258 GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDL 337 (1019)
Q Consensus 258 ~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 337 (1019)
+.+|..+. .+++|++|++++|++++.+|..++++++|++|+|++|++++.+|..+.++++|++|++++|.+....
T Consensus 226 ~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~---- 300 (968)
T PLN00113 226 GEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI---- 300 (968)
T ss_pred CcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC----
Confidence 99998876 7999999999999999999999999999999999999999999999999999999999999987533
Q ss_pred CccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCCchhhh
Q 001738 338 DFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIG 417 (1019)
Q Consensus 338 ~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 417 (1019)
+..+.++++|+.|++++|.+.+..|..+.+++.+. .|++++|.+++.+|..++.+++|+.|++++|++++.+|..+.
T Consensus 301 --p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~-~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 301 --PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQ-VLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred --ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCC-EEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 33467889999999999999999999999988765 599999999999999999999999999999999999999999
Q ss_pred cccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhccccccc
Q 001738 418 KLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLY 497 (1019)
Q Consensus 418 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~ 497 (1019)
.+++|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..|..+++|+.|++++|++++.+|..+..+.. ++.
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~ 456 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPS-LQM 456 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCC-CcE
Confidence 9999999999999999999999999999999999999999999999999999999999999999988887766555 457
Q ss_pred cccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcC
Q 001738 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577 (1019)
Q Consensus 498 L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 577 (1019)
|++++|.+.+.+|..++ .++|+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|..+..+++|+.|+|++|++
T Consensus 457 L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 457 LSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred EECcCceeeeecCcccc-cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcc
Confidence 99999999998888764 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhcccCccceEEccCCcCccccCCC-CccCCccccccccCCcccCCc
Q 001738 578 SGQIPKYLENLSFLEYLNISSNHFEGKVPTK-GVFSNKTRISLSGNGKLCGGL 629 (1019)
Q Consensus 578 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~~~ 629 (1019)
++.+|..+..+++|+.|++++|++++.+|.. ..+..+..+++++|+..+..|
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 9999999999999999999999999988864 567889999999999887554
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-46 Score=412.15 Aligned_cols=289 Identities=40% Similarity=0.637 Sum_probs=245.1
Q ss_pred CCCccCHHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEE
Q 001738 690 QFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITI 769 (1019)
Q Consensus 690 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 769 (1019)
....|++.++..+|++|.....||+|+||.||+|... +|+.||||++........++|.+|+.++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4567899999999999999999999999999999997 558999998875544313569999999999999999999999
Q ss_pred EecCCCCCcc-eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 770 CSSIDSHGVD-FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 770 ~~~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
|.+. + +.++|+|||++|+|.+++...... +++|..+++||.++|+||+|||+.+.+.||||||||+|||+
T Consensus 140 C~e~-----~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL 210 (361)
T KOG1187|consen 140 CLEG-----GEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL 210 (361)
T ss_pred EecC-----CceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence 9987 4 589999999999999999986532 58999999999999999999999988889999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCccccc-ccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC-
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI-KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF- 926 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~- 926 (1019)
|+++++||+|||+|+..... ....... .||.+|+|||+...+..+.|+|||||||++.|+++|+.|.+...
T Consensus 211 D~~~~aKlsDFGLa~~~~~~-------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~ 283 (361)
T KOG1187|consen 211 DEDFNAKLSDFGLAKLGPEG-------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP 283 (361)
T ss_pred CCCCCEEccCccCcccCCcc-------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC
Confidence 99999999999999653210 1111111 79999999999999999999999999999999999999887643
Q ss_pred CCcccHHHHHHHhCCc-chhhccChhhh-hhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 927 NDGLTIHEFAMKALPQ-RVIEIVDPLLL-LEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 927 ~~~~~~~~~~~~~~~~-~~~~~~d~~l~-~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.....+.+|+++.+.. .+.+++|+.+. ..+ ...++..++..++.+|++.+|.+|| +|.||+++
T Consensus 284 ~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~--------------~~~~~~~~~~~~a~~C~~~~~~~RP-~m~~Vv~~ 348 (361)
T KOG1187|consen 284 RGELSLVEWAKPLLEEGKLREIVDPRLKEGEY--------------PDEKEVKKLAELALRCLRPDPKERP-TMSQVVKE 348 (361)
T ss_pred cccccHHHHHHHHHHCcchhheeCCCccCCCC--------------ChHHHHHHHHHHHHHHcCcCCCcCc-CHHHHHHH
Confidence 3455588888777666 58899999875 322 1125678899999999999999999 99999999
Q ss_pred HHHHHH
Q 001738 1005 LCAARE 1010 (1019)
Q Consensus 1005 L~~i~~ 1010 (1019)
|+.+..
T Consensus 349 L~~~~~ 354 (361)
T KOG1187|consen 349 LEGILS 354 (361)
T ss_pred HHhhcc
Confidence 966543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=385.41 Aligned_cols=253 Identities=26% Similarity=0.355 Sum_probs=211.1
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc-eEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD-FKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~ 782 (1019)
+.+..+.||+|..|+||+++++.+++.+|+|++... ++...+++.+|+++++..+||+||.+||.|... . ..+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~-----~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN-----GEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC-----CceEE
Confidence 456678999999999999999999999999999644 445568899999999999999999999999887 4 589
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++|+|+++++..+. +++...-.|+.+|++||.|||+ + +||||||||+|||++..|+|||||||.
T Consensus 155 I~mEYMDgGSLd~~~k~~g~------i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRVGR------IPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred eehhhcCCCCHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccc
Confidence 99999999999999987654 8999999999999999999996 6 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+..+.. .....++||..|||||.+.+..|+.++||||||++++|+++|+.||...........+.
T Consensus 226 S~~lvn---------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L------ 290 (364)
T KOG0581|consen 226 SGILVN---------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL------ 290 (364)
T ss_pred cHHhhh---------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH------
Confidence 987632 24456899999999999999999999999999999999999999997642222222222
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
++....+.. |. .+. .++..++..++..|+++||.+|| |++|+++.
T Consensus 291 ------l~~Iv~~pp-------P~--lP~--~~fS~ef~~FV~~CL~Kdp~~R~-s~~qLl~H 335 (364)
T KOG0581|consen 291 ------LCAIVDEPP-------PR--LPE--GEFSPEFRSFVSCCLRKDPSERP-SAKQLLQH 335 (364)
T ss_pred ------HHHHhcCCC-------CC--CCc--ccCCHHHHHHHHHHhcCCcccCC-CHHHHhcC
Confidence 221111100 10 011 14677889999999999999999 99999874
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=379.69 Aligned_cols=201 Identities=32% Similarity=0.560 Sum_probs=183.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
..++|...+.||+|+||+||+|++++++..||||.+... .+...+.+..|+++++.++|||||++++++.+. +
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-----~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-----D 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----C
Confidence 457899999999999999999999999999999999765 556667789999999999999999999999987 7
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC------CC
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD------MV 853 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~ 853 (1019)
+.|+|||||.||+|.+|++..+. +++..++.++.|+|.||++||++ +||||||||+|||++.. -.
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCce
Confidence 89999999999999999998764 99999999999999999999999 99999999999999865 46
Q ss_pred eEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 854 AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+||+|||+|+.+.. .......+|++.|||||++...+|+.|+|+||+|+|+|++++|+.||+.
T Consensus 154 LKIADFGfAR~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 154 LKIADFGFARFLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred EEecccchhhhCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 89999999998743 2233457899999999999999999999999999999999999999975
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-46 Score=366.33 Aligned_cols=262 Identities=24% Similarity=0.329 Sum_probs=210.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.+|.+.++||+|+||+||++.+..+|..||.|.++.. +...++....|+.++++++|||||++++.-...+. ...
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~---evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN---EVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc---hhh
Confidence 4688999999999999999999999999999998743 44556788999999999999999999984322211 447
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCC-CeEeeccCCCceEeCCCCCeEEeeec
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQP-PIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
+||||||++|+|...++..+.++ ..+++..+|+++.|++.||.++|+..+. -|.||||||.||+++.+|.|||+|||
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qk--r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQK--RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhcc--ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 89999999999999998766543 3499999999999999999999995221 39999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+++++... .......+|||.||+||.+.+.+|+++|||||+||++|||+.-++||.+. .+.+...+..
T Consensus 174 L~r~l~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~ 241 (375)
T KOG0591|consen 174 LGRFLSSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIE 241 (375)
T ss_pred hHhHhcch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHH
Confidence 99987442 33445689999999999999999999999999999999999999999763 3333322222
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
...... -..+-....+.+++..|+..||+.|| +...++..+.
T Consensus 242 qgd~~~-----------------------~p~~~YS~~l~~li~~ci~vd~~~RP-~t~~~v~di~ 283 (375)
T KOG0591|consen 242 QGDYPP-----------------------LPDEHYSTDLRELINMCIAVDPEQRP-DTVPYVQDIQ 283 (375)
T ss_pred cCCCCC-----------------------CcHHHhhhHHHHHHHHHccCCcccCC-CcchHHHHHH
Confidence 111111 11123466788999999999999999 7555554443
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=395.05 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=211.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+|+..+.||+|||+.||++++..+|+.||+|++.+. .....+.+.+|+++.+.++|||||+++++|++. ++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs-----~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS-----NN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC-----Cc
Confidence 5799999999999999999999889999999999753 455678899999999999999999999999988 88
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
+|+|.|+|+.++|..+++..+. +++.+++.+.+||+.||.|||++ +|+|||||..|++++++.+|||+|||
T Consensus 93 VYivLELC~~~sL~el~Krrk~------ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRKP------LTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhcCC------CCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 9999999999999999985543 99999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+|..+.. ........+|||.|.|||++.+...+..+||||+|||+|.|+.|++||+.. .+.
T Consensus 164 LAt~le~-------~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vk------- 224 (592)
T KOG0575|consen 164 LATQLEY-------DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVK------- 224 (592)
T ss_pred eeeeecC-------cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHH-------
Confidence 9998743 223455689999999999999999999999999999999999999999752 111
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+.++.....+| ..|. ....+..+++.++|+.||.+|| |+++|+.
T Consensus 225 -----ety~~Ik~~~Y-----~~P~--------~ls~~A~dLI~~lL~~~P~~Rp-sl~~vL~ 268 (592)
T KOG0575|consen 225 -----ETYNKIKLNEY-----SMPS--------HLSAEAKDLIRKLLRPNPSERP-SLDEVLD 268 (592)
T ss_pred -----HHHHHHHhcCc-----cccc--------ccCHHHHHHHHHHhcCCcccCC-CHHHHhc
Confidence 11111111111 1121 1133458899999999999999 9999986
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-44 Score=390.58 Aligned_cols=260 Identities=32% Similarity=0.483 Sum_probs=210.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEE-EEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLL-VAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~-vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
+..+.+.+|+|+||+||+|.++ |+. ||||++..... ...+.|.+|+.+|.+++|||||+++|++..... ..
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----~~ 115 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----SL 115 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----ce
Confidence 3445566999999999999995 666 99999975432 225689999999999999999999999988631 57
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEeeccCCCceEeCCCC-CeEEeee
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPP-IIHGDLKPSNVLLDHDM-VAHVGDF 859 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kL~Df 859 (1019)
++||||+++|+|.+++.... ...+++..++.|+.|||+||.|||++ + ||||||||+|||++.++ ++||+||
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCC
Confidence 99999999999999998741 23399999999999999999999999 7 99999999999999998 9999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCccccc--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM--GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
|+++...... ...+...||+.|||||++. ...|+.|+|||||||++|||+||+.||..... .......+.
T Consensus 189 Glsr~~~~~~-------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~ 260 (362)
T KOG0192|consen 189 GLSREKVISK-------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVV 260 (362)
T ss_pred ccceeecccc-------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHh
Confidence 9998753211 2333468999999999999 56899999999999999999999999986433 111111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhhh
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~~ 1013 (1019)
... +|.. ...+...+..++.+||+.||+.|| ++.|++..|+.+.....
T Consensus 261 ~~~----------------------Rp~~-----p~~~~~~l~~l~~~CW~~dp~~RP-~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 261 GGL----------------------RPPI-----PKECPPHLSSLMERCWLVDPSRRP-SFLEIVSRLESIMSHIS 308 (362)
T ss_pred cCC----------------------CCCC-----CccCCHHHHHHHHHhCCCCCCcCC-CHHHHHHHHHHHHHhhc
Confidence 111 1100 012566789999999999999999 99999999999877654
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-49 Score=402.49 Aligned_cols=477 Identities=29% Similarity=0.457 Sum_probs=361.8
Q ss_pred eeeEEeeeccCCCCccccCcCCCcccceeccCCCccCCCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhhc
Q 001738 76 RVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAH 155 (1019)
Q Consensus 76 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~ 155 (1019)
...++++++|.+. .+.+.+.+|..|.+|++++|+++ +.|+++|.+..++.|+.|+|+++ .+|+.++++.+|+.++.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4678889999887 45567899999999999999999 89999999999999999999999 999999999999999999
Q ss_pred cccccccccccccccccccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCC
Q 001738 156 GNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGN 235 (1019)
Q Consensus 156 ~n~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 235 (1019)
+|++.. +|++++ .+..|+.|+..+|+++ ++|++++++.+|..|++.+|+++...|+.+. ++.|+.||..+|.++ .
T Consensus 123 ~n~~~e-l~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 123 SNELKE-LPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-T 197 (565)
T ss_pred ccceee-cCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-c
Confidence 999875 455555 4678999999999999 9999999999999999999999955555554 999999999999998 8
Q ss_pred CCCcccccccccceeccCCcccCCCCccccccccccceEEecccccCCCCCCccc-CCCcCCeEecCCCcCCCCCCcccc
Q 001738 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFS-NTSNLVMLDLNLNLFSGKVPINFS 314 (1019)
Q Consensus 236 ~p~~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~l~ 314 (1019)
+|+.++.+.+|+.|||.+|++. .+| ++. ++..|++|+++.|++. .+|.+.+ ++++|.+|||..|+++ ..|+.++
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~-gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFP-GCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCC-ccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 9999999999999999999998 888 443 6889999999999998 5666555 9999999999999999 6999999
Q ss_pred cccCcccccccCccCCCCCCCCCCccccccccccchhhcccCccccccCCcccccccccc--eEEec--cCcccc---c-
Q 001738 315 RLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTT--VQINM--GRNQIS---G- 386 (1019)
Q Consensus 315 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~--~~L~l--~~n~i~---~- 386 (1019)
-+++|++||+++|.|+..+ ..++++ +|+.|-+.||.+...-.+.+ +.++.. ++|.- ..-.++ |
T Consensus 273 lLrsL~rLDlSNN~is~Lp-------~sLgnl-hL~~L~leGNPlrTiRr~ii-~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISSLP-------YSLGNL-HLKFLALEGNPLRTIRREII-SKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred HhhhhhhhcccCCccccCC-------cccccc-eeeehhhcCCchHHHHHHHH-cccHHHHHHHHHHhhccCCCCCCccc
Confidence 9999999999999998754 568888 99999999999985433222 222111 11100 000110 0
Q ss_pred ---------cCcccccCCCCcCeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccc
Q 001738 387 ---------TIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ 457 (1019)
Q Consensus 387 ---------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 457 (1019)
........+.+.+.|+++.-+++ .+|++.+.-.. -.-....+++.|++.
T Consensus 344 ~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~---------------------~~~Vt~VnfskNqL~ 401 (565)
T KOG0472|consen 344 TETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAK---------------------SEIVTSVNFSKNQLC 401 (565)
T ss_pred ccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhh---------------------hcceEEEecccchHh
Confidence 00111223334444444444444 33333333322 001444555555554
Q ss_pred cccCCCcccccccc-hhccccccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCcc
Q 001738 458 GNIPSSLGNCRSLL-SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPAT 536 (1019)
Q Consensus 458 ~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 536 (1019)
++|..+..++.+. .+.+++|.++ .+|..+..+.++ ..|+|++|.+. .+|.+++.+..|+.||+|.|++. .+|..
T Consensus 402 -elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kL-t~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~ 476 (565)
T KOG0472|consen 402 -ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKL-TFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPEC 476 (565)
T ss_pred -hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcc-eeeecccchhh-hcchhhhhhhhhheecccccccc-cchHH
Confidence 4454444444432 2333344433 444444333332 23555555544 45777888888999999999998 88998
Q ss_pred ccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEccCCcCc
Q 001738 537 LSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602 (1019)
Q Consensus 537 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 602 (1019)
+..+..|+.+-.++|++....|..+.+|.+|.+|||.+|.|. .+|+.+++|++|++|++++|+|.
T Consensus 477 ~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 477 LYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 888888888888899999777777999999999999999998 78889999999999999999998
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=375.31 Aligned_cols=255 Identities=25% Similarity=0.354 Sum_probs=206.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-------chhhHHHHHHHHHHhcCCCCCcceEEEEEecCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-------KGAFKSFVAECEALRNIRHRNLIKIITICSSID 774 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 774 (1019)
....|.+.+.||+|+||.|-+|..+.+|+.||||++.+.. ........+|+++|++++|||||+++++|+..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~- 248 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP- 248 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC-
Confidence 3457889999999999999999999999999999997431 11223457999999999999999999999988
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC---
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD--- 851 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--- 851 (1019)
+..|+||||++||+|.+++-.++. +.+..-+.+++|++.|+.|||++ ||+||||||+|||+..+
T Consensus 249 ----ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 249 ----DSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAED 315 (475)
T ss_pred ----CceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcc
Confidence 677999999999999999988765 77778889999999999999999 99999999999999765
Q ss_pred CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCC---CCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 001738 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA---SMAGDVYSFGILLLEMFIRKRPTDSMFND 928 (1019)
Q Consensus 852 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwSlGvil~ell~g~~Pf~~~~~~ 928 (1019)
..+||+|||+|++.. ....+...+|||.|.|||++.+..+ ..+.|+||+||++|-+++|.+||.+...+
T Consensus 316 ~llKItDFGlAK~~g--------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~ 387 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSG--------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD 387 (475)
T ss_pred eEEEecccchhhccc--------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC
Confidence 789999999999753 3445667899999999999886643 34789999999999999999999864332
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. .+.+.+.+ .++ .+-| ....+..++..+++.+|+..||++|| |++|+++.
T Consensus 388 ~-sl~eQI~~---G~y--~f~p-------------------~~w~~Iseea~dlI~~mL~VdP~~R~-s~~eaL~h 437 (475)
T KOG0615|consen 388 P-SLKEQILK---GRY--AFGP-------------------LQWDRISEEALDLINWMLVVDPENRP-SADEALNH 437 (475)
T ss_pred c-cHHHHHhc---Ccc--cccC-------------------hhhhhhhHHHHHHHHHhhEeCcccCc-CHHHHhcC
Confidence 2 12222111 110 0111 11233466779999999999999999 99999874
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=386.12 Aligned_cols=431 Identities=30% Similarity=0.443 Sum_probs=348.7
Q ss_pred ccccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCccccccccccee
Q 001738 171 WMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250 (1019)
Q Consensus 171 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 250 (1019)
+..|.+|++++|+++ ++|++++.+..++.|++++|+++ .+|..++.+.+|..|++++|.+. .+|++++.+-.|+.|+
T Consensus 67 L~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~ 143 (565)
T KOG0472|consen 67 LACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLD 143 (565)
T ss_pred ccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhh
Confidence 345777777777777 77777788888888888888877 77777777888888888888777 6777777777788888
Q ss_pred ccCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCC
Q 001738 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG 330 (1019)
Q Consensus 251 L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 330 (1019)
..+|+++ ++|.+++ .+.+|..+++.+|+++...|..+. ++.|++||+..|.++ .+|..++.+.+|..|+|..|+|.
T Consensus 144 ~~~N~i~-slp~~~~-~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~ 219 (565)
T KOG0472|consen 144 ATNNQIS-SLPEDMV-NLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR 219 (565)
T ss_pred ccccccc-cCchHHH-HHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc
Confidence 8888776 7777776 567777778888888754444444 888888888888877 57777888888888888888876
Q ss_pred CCCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCC
Q 001738 331 NGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTG 410 (1019)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~ 410 (1019)
..+ .+..|+.|++|+++.|++.-...+...+++...+ ||+..|+++ ..|+.+.-+++|++||+++|.++
T Consensus 220 ~lP--------ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~v-LDLRdNklk-e~Pde~clLrsL~rLDlSNN~is- 288 (565)
T KOG0472|consen 220 FLP--------EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLV-LDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS- 288 (565)
T ss_pred cCC--------CCCccHHHHHHHhcccHHHhhHHHHhccccccee-eeccccccc-cCchHHHHhhhhhhhcccCCccc-
Confidence 543 4667888888888888887433333346666554 888888887 77888888888888888888888
Q ss_pred CCchhhhcccccceeecccccccCc--------------------------------------ccc---ccCCCCcccEE
Q 001738 411 TIPHEIGKLTNLQLLYLDFNLLEGS--------------------------------------IPF---SLGNLTLLTEL 449 (1019)
Q Consensus 411 ~~p~~~~~l~~L~~L~L~~N~l~~~--------------------------------------~p~---~l~~l~~L~~L 449 (1019)
.+|.+++++ .|+.|.+.+|.+..+ .+. ......+.+.|
T Consensus 289 ~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL 367 (565)
T KOG0472|consen 289 SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKIL 367 (565)
T ss_pred cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhh
Confidence 677788888 888888888876520 111 11234578889
Q ss_pred EccCcccccccCCCcccccc---cchhccccccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccC
Q 001738 450 ELQSNYLQGNIPSSLGNCRS---LLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISR 526 (1019)
Q Consensus 450 ~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 526 (1019)
+++.-+++ .+|+..+.-.+ .+..+++.|++. ++|..+..+..+...+.+++|.+. .+|..++.+++|+.|+|++
T Consensus 368 ~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~N 444 (565)
T KOG0472|consen 368 DVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSN 444 (565)
T ss_pred cccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeeccc
Confidence 99999998 67777665555 788999999999 899999999999888999998885 7899999999999999999
Q ss_pred cccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEccCCcCccccC
Q 001738 527 NQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVP 606 (1019)
Q Consensus 527 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 606 (1019)
|-+. .+|..++.+..|+.|++|.|++. .+|.....+..|+.+--++|++....|..+.+|.+|..||+.+|.+..++|
T Consensus 445 N~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp 522 (565)
T KOG0472|consen 445 NLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPP 522 (565)
T ss_pred chhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCCh
Confidence 9997 89999999999999999999998 899999999999999999999997777779999999999999999999999
Q ss_pred CCCccCCccccccccCCcc
Q 001738 607 TKGVFSNKTRISLSGNGKL 625 (1019)
Q Consensus 607 ~~~~~~~~~~~~~~~N~~~ 625 (1019)
..+.+.+++.+.+.|||+.
T Consensus 523 ~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 523 ILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhccccceeEEEecCCccC
Confidence 9999999999999999987
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=361.35 Aligned_cols=201 Identities=33% Similarity=0.444 Sum_probs=183.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.++|++.++||+|+||+||.++.+++++.+|+|++++. .....+...+|..++.+++||.||+++..|++. .
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~-----~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE-----E 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC-----C
Confidence 46899999999999999999999999999999999754 334567789999999999999999999999887 7
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..|+|+||+.||.|...+++.+. +++..++-++.+|+.||.|||++ ||||||+||+|||+|.+|+++|+||
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 89999999999999999998765 99999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
|+++.... ....+..++||+.|||||++.+..|+.++|.||+|+++|||++|.+||..
T Consensus 170 gL~k~~~~-------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~ 227 (357)
T KOG0598|consen 170 GLCKEDLK-------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA 227 (357)
T ss_pred ccchhccc-------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence 99985422 22334458999999999999999999999999999999999999999976
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=381.16 Aligned_cols=258 Identities=31% Similarity=0.467 Sum_probs=210.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.++..+.||+|.||+||.|.+. ....||+|.++... ...+.|.+|+++|++++|++||+++++|... .-+|||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyIV 279 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYIV 279 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEEE
Confidence 3456789999999999999996 44589999998542 3347888999999999999999999999886 458999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
||||+.|+|.+|++.... ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+.
T Consensus 280 tE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred EEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccc
Confidence 999999999999998332 3388999999999999999999999 999999999999999999999999999995
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
..++.+ ....+..-+..|.|||.+..+.++.|||||||||++|||+| |+.||..+...+ ..
T Consensus 353 ~~d~~Y------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--v~---------- 414 (468)
T KOG0197|consen 353 IGDDEY------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--VL---------- 414 (468)
T ss_pred cCCCce------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--HH----------
Confidence 433322 22233345788999999999999999999999999999999 888987653321 11
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhh
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~ 1012 (1019)
+.++. ..+-|++ +.|+..+.++|..||+.+|++|| |++.+...++++....
T Consensus 415 --~~le~---------GyRlp~P------~~CP~~vY~lM~~CW~~~P~~RP-tF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 415 --ELLER---------GYRLPRP------EGCPDEVYELMKSCWHEDPEDRP-TFETLREVLEDFFTST 465 (468)
T ss_pred --HHHhc---------cCcCCCC------CCCCHHHHHHHHHHhhCCcccCC-CHHHHHHHHHHhhhcc
Confidence 11111 1111222 34788899999999999999999 9999999988876543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=349.13 Aligned_cols=272 Identities=20% Similarity=0.289 Sum_probs=208.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
+.|+...++|+|+||+||+++++++|+.||||.+....+ .-.+-.++|++++++++|||+|.++.+|... ...
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk-----rkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK-----RKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc-----cee
Confidence 468888999999999999999999999999999964332 2345568999999999999999999999876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++|+|||+. ++-+-+..... .++...+.++++|+++|+.|+|++ ++|||||||+||+++.+|.+||||||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p~-----G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYPN-----GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhccC-----CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999976 44444544432 289999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH---
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM--- 937 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--- 937 (1019)
|+.+.. +....+.++.|.+|+|||.+.| .+|++..||||+||++.||++|.+-|.+..+ .+....++
T Consensus 148 AR~L~~-------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD--iDQLy~I~ktL 218 (396)
T KOG0593|consen 148 ARTLSA-------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD--IDQLYLIRKTL 218 (396)
T ss_pred hHhhcC-------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch--HHHHHHHHHHH
Confidence 998742 2233455788999999999887 6899999999999999999999999986422 22111122
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHH----HHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEE----CLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~----~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..+.++...++..--. -..-.-|....++..++ ...-+++++..|++.||.+|+ +.+|++.
T Consensus 219 G~L~prhq~iF~~N~~----F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~-sc~qll~ 283 (396)
T KOG0593|consen 219 GNLIPRHQSIFSSNPF----FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL-SCEQLLH 283 (396)
T ss_pred cccCHHHHHHhccCCc----eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc-cHHHHhc
Confidence 2222233333221000 00112233333333332 334578999999999999999 9999875
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=367.08 Aligned_cols=260 Identities=27% Similarity=0.365 Sum_probs=211.5
Q ss_pred HHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCC
Q 001738 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDS 775 (1019)
Q Consensus 700 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 775 (1019)
++...+|.+.+.||+|+|++|++|+.+.+++.||||++.+. .....+.+..|-.+|.++ .||.|++++..|.+.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~-- 146 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE-- 146 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc--
Confidence 34557899999999999999999999999999999998643 233346677899999999 899999999999887
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
...|+|+||+++|+|.++|+..+. +++...+.++.||+.|++|||++ |||||||||+|||+|.||++|
T Consensus 147 ---~sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 147 ---ESLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ---cceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 678999999999999999998875 99999999999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCC------CCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 001738 856 VGDFGLAKFLYTCQVD------DVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG 929 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~ 929 (1019)
|+|||.|+.+...... ..........++||..|.+||++.+...++.+|+|+||||+|+|+.|.+||.+..+
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-- 292 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-- 292 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--
Confidence 9999999988654433 11112222568999999999999999999999999999999999999999976311
Q ss_pred ccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 930 LTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
....+.++ ..+| ..|. ..++...+++.+.+..||.+|. |+++|.+.
T Consensus 293 yliFqkI~---------------~l~y-----~fp~--------~fp~~a~dLv~KLLv~dp~~Rl-t~~qIk~H 338 (604)
T KOG0592|consen 293 YLIFQKIQ---------------ALDY-----EFPE--------GFPEDARDLIKKLLVRDPSDRL-TSQQIKAH 338 (604)
T ss_pred HHHHHHHH---------------Hhcc-----cCCC--------CCCHHHHHHHHHHHccCccccc-cHHHHhhC
Confidence 11111111 1111 0011 1123457888899999999999 99888653
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=386.01 Aligned_cols=268 Identities=29% Similarity=0.467 Sum_probs=221.9
Q ss_pred CCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
.+....+.||+|+||+||+|+.. ++.+.||||.++..... ..++|++|++++..++|||||+++|+|...
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~---- 561 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG---- 561 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC----
Confidence 45566789999999999999864 34578999999866555 789999999999999999999999999988
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCC--------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHD--------VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 849 (1019)
+-.|+|+|||..|+|.+|++...+... ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||.
T Consensus 562 -~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 562 -DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred -CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 557999999999999999987654221 33489999999999999999999999 999999999999999
Q ss_pred CCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCC
Q 001738 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFND 928 (1019)
Q Consensus 850 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~ 928 (1019)
++..|||+|||+++.++..++...... ..-..+|||||.+..++||.+||||||||++||+++ |+.||.+..++
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~~-----t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~ 712 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRGN-----TLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ 712 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccCC-----ceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH
Confidence 999999999999998877776554322 233789999999999999999999999999999999 99999875432
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
+ ..+.+.. .++ -+..+.|+.+++++|..||+..|++|| +++||-..|++.
T Consensus 713 E--VIe~i~~---g~l------------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RP-sF~eI~~~L~~~ 762 (774)
T KOG1026|consen 713 E--VIECIRA---GQL------------------------LSCPENCPTEVYSLMLECWNENPKRRP-SFKEIHSRLQAW 762 (774)
T ss_pred H--HHHHHHc---CCc------------------------ccCCCCCCHHHHHHHHHHhhcCcccCC-CHHHHHHHHHHH
Confidence 1 1111110 000 111245788999999999999999999 999999999988
Q ss_pred HHhhhh
Q 001738 1009 REAFLS 1014 (1019)
Q Consensus 1009 ~~~~~~ 1014 (1019)
..+-..
T Consensus 763 ~~~s~~ 768 (774)
T KOG1026|consen 763 AQASPK 768 (774)
T ss_pred HhcCcc
Confidence 766543
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=358.17 Aligned_cols=259 Identities=26% Similarity=0.365 Sum_probs=205.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|...+.||+|+||+||++...++|...|||.....+....+.+.+|+.+|++++|||||+++|....... ..+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeEe
Confidence 467888999999999999999998899999999986644446778999999999999999999997554422 36899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCCeEEeeeccc
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDFGLA 862 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a 862 (1019)
.|||+++|+|.+++...+. .+++..++.+.+||++||+|||++ |||||||||+|||++. ++.+||+|||++
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLA 165 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccc
Confidence 9999999999999998763 299999999999999999999999 9999999999999999 799999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+..... ...........||+.|||||++..+ ...+++||||+||++.||+||++||... ....++......
T Consensus 166 ~~~~~~----~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~ 237 (313)
T KOG0198|consen 166 KKLESK----GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGR 237 (313)
T ss_pred cccccc----cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhc
Confidence 865420 1122334467899999999999853 3446999999999999999999999763 111111111111
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
......+.. .......+++.+|++.||++|| ||+++++.-
T Consensus 238 ~~~~P~ip~-----------------------~ls~~a~~Fl~~C~~~~p~~Rp-ta~eLL~hp 277 (313)
T KOG0198|consen 238 EDSLPEIPD-----------------------SLSDEAKDFLRKCFKRDPEKRP-TAEELLEHP 277 (313)
T ss_pred cCCCCCCCc-----------------------ccCHHHHHHHHHHhhcCcccCc-CHHHHhhCh
Confidence 110001111 1234568899999999999999 999999865
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=350.94 Aligned_cols=265 Identities=22% Similarity=0.302 Sum_probs=213.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.++||.|..++||+|+....++.||||++..+.- ...+.+.+|++.|+.++||||++++..|... ...
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~-----~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD-----SEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec-----cee
Confidence 4689999999999999999999999999999999986543 3368899999999999999999999999887 789
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|+||.||.+|++.+.++...... +++..+..|.+++++||.|||.+ |.||||||+.|||++.+|.|||+|||.
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~G----l~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDG----LEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred EEeehhhcCCcHHHHHHHHcccc----ccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCcee
Confidence 99999999999999999876533 99999999999999999999999 999999999999999999999999998
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
+..+.... .+ .......++||+.|||||++.. ..|+.|+||||||++..||++|..||.....-. .+.......
T Consensus 173 sa~l~~~G-~R--~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk-vLl~tLqn~ 248 (516)
T KOG0582|consen 173 SASLFDSG-DR--QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK-VLLLTLQND 248 (516)
T ss_pred eeeecccC-ce--eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH-HHHHHhcCC
Confidence 87765533 11 1111156789999999999543 369999999999999999999999997642210 011111111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.|-.... ....++.......+.+++..|+++||.+|| |++++++
T Consensus 249 pp~~~t~-------------------~~~~d~~k~~~ksf~e~i~~CL~kDP~kRp-tAskLlk 292 (516)
T KOG0582|consen 249 PPTLLTS-------------------GLDKDEDKKFSKSFREMIALCLVKDPSKRP-TASKLLK 292 (516)
T ss_pred CCCcccc-------------------cCChHHhhhhcHHHHHHHHHHhhcCcccCC-CHHHHhc
Confidence 1100101 111222334456789999999999999999 9999986
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=370.08 Aligned_cols=269 Identities=28% Similarity=0.399 Sum_probs=214.3
Q ss_pred HHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCC
Q 001738 697 AELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSID 774 (1019)
Q Consensus 697 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 774 (1019)
.++....++..+.+.||+|+||+||+|+|.. .||||++..+. ++..+.|++|+..+++-+|.||+-++|++..+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p- 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP- 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-
Confidence 3445556778889999999999999999963 59999998653 44678899999999999999999999999875
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
.. .||+.+|+|-+|+.+++..+. .+.+.+.+.||+|||+||.|||.+ +|||||+|..||++.++++|
T Consensus 461 ----~~-AIiTqwCeGsSLY~hlHv~et-----kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 461 ----PL-AIITQWCEGSSLYTHLHVQET-----KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred ----ce-eeeehhccCchhhhhccchhh-----hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcE
Confidence 33 899999999999999987653 389999999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG---SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLT 931 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~ 931 (1019)
||+|||++....... .........|...|||||++.. .+|++.+||||||+|+|||++|..||.....+ ..
T Consensus 528 kIgDFGLatvk~~w~-----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d-qI 601 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWS-----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD-QI 601 (678)
T ss_pred EEecccceeeeeeec-----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh-he
Confidence 999999998654332 1112223467889999998764 37999999999999999999999999732222 11
Q ss_pred HHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 932 IHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 932 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
+...-.. ..-+.+ ......|..++.+++..||.++|++|| .+.+|+..|+.+...
T Consensus 602 ifmVGrG--------~l~pd~----------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP-~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 602 IFMVGRG--------YLMPDL----------------SKIRSNCPKAMKRLLSDCWKFDREERP-LFPQLLSKLEELLPS 656 (678)
T ss_pred EEEeccc--------ccCccc----------------hhhhccCHHHHHHHHHHHHhcCcccCc-cHHHHHHHHHHhhhc
Confidence 1100000 000001 111234677899999999999999999 999999999888764
Q ss_pred hh
Q 001738 1012 FL 1013 (1019)
Q Consensus 1012 ~~ 1013 (1019)
..
T Consensus 657 ~p 658 (678)
T KOG0193|consen 657 LP 658 (678)
T ss_pred cc
Confidence 43
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-41 Score=328.34 Aligned_cols=273 Identities=23% Similarity=0.321 Sum_probs=209.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.+|...+++|+|.||.||+|++.++|+.||||.++.... +......+|++.++.++|+||+.++++|... +..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~-----~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK-----SNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-----Cce
Confidence 478889999999999999999999999999999985532 2235678999999999999999999999877 667
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
.+|+||++ .+|+..++... ..++..++..++.++++|++|+|++ .|+||||||.|+|++.+|.+||+|||+
T Consensus 77 ~lVfEfm~-tdLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMP-TDLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEecc-ccHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 89999996 59999998765 3489999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
|+.+.... ......+-|..|+|||.+.|. .|+...||||.|||+.||+.|.+-|.+..+ .+-...+...+
T Consensus 148 Ar~f~~p~-------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD--idQL~~If~~L 218 (318)
T KOG0659|consen 148 ARFFGSPN-------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD--IDQLSKIFRAL 218 (318)
T ss_pred hhccCCCC-------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch--HHHHHHHHHHc
Confidence 99874322 222233779999999998875 699999999999999999999988876322 11111111111
Q ss_pred ----CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 941 ----PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 941 ----~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
++.+.++.. ..+|.... ..|......-...+.....+++.+++.+||.+|. |++|++++
T Consensus 219 GTP~~~~WP~~~~---lpdY~~~~-~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Ri-ta~qaL~~ 281 (318)
T KOG0659|consen 219 GTPTPDQWPEMTS---LPDYVKIQ-QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRI-TASQALKH 281 (318)
T ss_pred CCCCcccCccccc---cccHHHHh-cCCCCccccccccccHHHHHHHHhhhccCchhcc-cHHHHhcc
Confidence 111222111 11111111 1222211212233455569999999999999999 99998764
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=360.94 Aligned_cols=278 Identities=20% Similarity=0.225 Sum_probs=210.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchh-hHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.++|.+.++||.|.||.||+|+...+|..||||.++..-... .-.=.+|++.++++. ||||+++.+++.+.+ ..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----RI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----ce
Confidence 358999999999999999999999999999999987442221 122368999999998 999999999998873 27
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+|||||+ .+|++.++..+ ..+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||
T Consensus 85 L~fVfE~Md-~NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 85 LYFVFEFMD-CNLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred EeeeHHhhh-hhHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccc
Confidence 999999995 59999998764 3499999999999999999999999 99999999999999989999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
+|+.+. .....+.++.|.+|+|||++.+ +.|+.+.||||+|||++|+.+-++-|.+..+ .+-...+...
T Consensus 156 LARev~--------SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE--~Dqi~KIc~V 225 (538)
T KOG0661|consen 156 LAREVR--------SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE--IDQIYKICEV 225 (538)
T ss_pred cccccc--------cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH--HHHHHHHHHH
Confidence 999753 2334456788999999998765 5689999999999999999999999987432 1211122222
Q ss_pred CCcchhhccCh--hhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDP--LLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~--~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
+.....+..+. .+.....-..-..+..+...-...+..+..+++.+|+++||.+|| ||++.++.
T Consensus 226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRp-TA~~al~~ 291 (538)
T KOG0661|consen 226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRP-TASQALQH 291 (538)
T ss_pred hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCc-cHHHHhcC
Confidence 22111111111 111111111111111222222223566779999999999999999 99999874
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=357.10 Aligned_cols=273 Identities=24% Similarity=0.314 Sum_probs=210.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
+.|+.+++||+|.||.||+|++..+|+.||+|.+..+. ++...-..+|+.+|+++.||||+++.+...+... ..+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~---~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS---GSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC---ceE
Confidence 46778889999999999999999999999999997654 4445566899999999999999999999887633 578
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|+|+|||+. +|.-++....- .+++.++..+++|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+
T Consensus 194 YlVFeYMdh-DL~GLl~~p~v-----kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGV-----KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEecccc-hhhhhhcCCCc-----ccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccc
Confidence 999999976 89888877542 399999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
|+++.... ....+..+-|.+|+|||.+.|. .|+.+.|+||.|||+.||++|++.|.+..+ ..-.+.+.+..
T Consensus 265 Ar~y~~~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE--veQl~kIfklc 336 (560)
T KOG0600|consen 265 ARFYTPSG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE--VEQLHKIFKLC 336 (560)
T ss_pred eeeccCCC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH--HHHHHHHHHHh
Confidence 99875433 2224556789999999998875 699999999999999999999999986422 11112222211
Q ss_pred ---CcchhhccChhhhhhhhccCCCCCCCC----CCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 ---PQRVIEIVDPLLLLEVRTNNSKNPCGD----GRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ---~~~~~~~~d~~l~~~~~~~~~~~p~~~----~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+..+...+-.. ....+|... .++.........++++..+|..||.+|. ||.++++
T Consensus 337 GSP~e~~W~~~kLP~------~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~-tA~~aL~ 399 (560)
T KOG0600|consen 337 GSPTEDYWPVSKLPH------ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRG-TASSALQ 399 (560)
T ss_pred CCCChhccccccCCc------ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccc-cHHHHhc
Confidence 112222111000 011111111 1111223445678999999999999999 9998875
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=365.24 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=211.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
...|+..++||+|+.|.||.|+...+++.||||++........+-+.+|+.+|+..+|+|||++++.|... +..|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeE
Confidence 34688889999999999999999999999999999877766667789999999999999999999988776 7799
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|||||+||+|.+.+.... +++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++
T Consensus 347 VVMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFc 416 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFC 416 (550)
T ss_pred EEEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeee
Confidence 9999999999999998776 89999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
..+... .......+|||+|||||+.....|++|.||||||++++||+-|.+||-. +. .+.+.
T Consensus 417 aqi~~~-------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln---E~-PlrAl------- 478 (550)
T KOG0578|consen 417 AQISEE-------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN---EN-PLRAL------- 478 (550)
T ss_pred eccccc-------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC---CC-hHHHH-------
Confidence 876432 2355668999999999999999999999999999999999999999853 11 11100
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
|.......|....+ +.....+.+++.+||..||.+|| +|.|+++
T Consensus 479 -------------yLIa~ng~P~lk~~---~klS~~~kdFL~~cL~~dv~~Ra-sA~eLL~ 522 (550)
T KOG0578|consen 479 -------------YLIATNGTPKLKNP---EKLSPELKDFLDRCLVVDVEQRA-SAKELLE 522 (550)
T ss_pred -------------HHHhhcCCCCcCCc---cccCHHHHHHHHHHhhcchhcCC-CHHHHhc
Confidence 00111111111111 22355688999999999999999 9999987
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=330.13 Aligned_cols=198 Identities=30% Similarity=0.397 Sum_probs=182.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+|++.+.||.|+||+|.+++.+.+|..+|+|++++.. -.+.+...+|..+++.+.||.++++++.+.+. ++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~-----~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN-----SN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-----Ce
Confidence 47889999999999999999999999999999997543 34456778999999999999999999998887 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||++||.|.++++..+. +++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|++||+|||
T Consensus 119 lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEecc
Confidence 9999999999999999998765 99999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
+|+.. ...+...+|||.|+|||++...+|..++|.|||||++|||+.|.+||.+.
T Consensus 190 FAK~v----------~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 190 FAKRV----------SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred ceEEe----------cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 99975 23356789999999999999999999999999999999999999999763
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=357.19 Aligned_cols=247 Identities=27% Similarity=0.410 Sum_probs=208.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|.+.+.||+|+||.||||+.+.+.+.||+|.+.+.. +...+.+.+|+++++.++||||+.++++|++. .+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~-----~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS-----AHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc-----ceE
Confidence 57889999999999999999999999999999997543 33467789999999999999999999999987 789
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|+|+||+.| +|..++...+. ++++.++.++.+++.||.|||+. +|.|||+||+||+++.+|++|+||||+
T Consensus 77 ~vVte~a~g-~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999977 99999998765 99999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
|+-... .......+.|||.|||||...+.+|+..+|+||+|||+||+++|++||... .+.+.+.....
T Consensus 147 Ar~m~~-------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~ 214 (808)
T KOG0597|consen 147 ARAMST-------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILK 214 (808)
T ss_pred hhhccc-------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhc
Confidence 986532 233445678999999999999999999999999999999999999999641 12222222111
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+. ..+.. .....+..++...+.+||.+|- |..+++.
T Consensus 215 d~---------------------v~~p~----~~S~~f~nfl~gLL~kdP~~Rl-tW~~Ll~ 250 (808)
T KOG0597|consen 215 DP---------------------VKPPS----TASSSFVNFLQGLLIKDPAQRL-TWTDLLG 250 (808)
T ss_pred CC---------------------CCCcc----cccHHHHHHHHHHhhcChhhcc-cHHHHhc
Confidence 11 11111 2344578888899999999999 8888765
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=351.65 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=210.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..|+..+.||+|+||.||+|.+..+++.||+|++..+ .....+++.+|+.++..++++||.++|+.|... ...+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-----~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-----TKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-----ccHH
Confidence 4688889999999999999999999999999999865 345578899999999999999999999998877 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
++||||.||++.+.++.... +++.++.-+++++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.+
T Consensus 88 iiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 99999999999999987663 57888888999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
..+... ......++||+.|||||++.+..|+.|+||||||++.+||++|.+|+.....-. . .-.
T Consensus 159 ~ql~~~-------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr--v----lfl--- 222 (467)
T KOG0201|consen 159 GQLTNT-------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR--V----LFL--- 222 (467)
T ss_pred eeeech-------hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce--E----EEe---
Confidence 876432 233356899999999999998899999999999999999999999997642210 0 000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
+.+-..|.+.. .+...+.+++..|+++||+.|| ||.++++.
T Consensus 223 -Ipk~~PP~L~~-------------------~~S~~~kEFV~~CL~k~P~~Rp-sA~~LLKh 263 (467)
T KOG0201|consen 223 -IPKSAPPRLDG-------------------DFSPPFKEFVEACLDKNPEFRP-SAKELLKH 263 (467)
T ss_pred -ccCCCCCcccc-------------------ccCHHHHHHHHHHhhcCcccCc-CHHHHhhh
Confidence 11111222221 3456689999999999999999 99999873
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=340.20 Aligned_cols=285 Identities=23% Similarity=0.261 Sum_probs=217.3
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEee--cccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
....|...+.||+|+||.|+.|.++.+|+.||||.+. .......++..+|+++++.++|+||+.+.+++.........
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456777899999999999999999999999999986 44555667889999999999999999999999875555568
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
.+|+|+|+| +-+|...++.+.. ++..++..+.+|+++||+|+|+. +|+|||+||+|++++.+..+||+||
T Consensus 100 DvYiV~elM-etDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 899999999 5699999998765 89999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+|+..... ......+..+.|.+|+|||++. ...|+.+.||||.|||+.||++|++-|.+... ..-......
T Consensus 170 GLAR~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~--v~Ql~lI~~ 242 (359)
T KOG0660|consen 170 GLARYLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY--VHQLQLILE 242 (359)
T ss_pred cceeecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch--HHHHHHHHH
Confidence 999986433 2344556788899999999865 45799999999999999999999999976422 111111222
Q ss_pred hCC---cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 ALP---QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~~~---~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..+ +.....+...-...+-...-..|...-..-...+....++++.+|+..||.+|+ |++|.++.
T Consensus 243 ~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRi-ta~eAL~h 310 (359)
T KOG0660|consen 243 LLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRI-TAEEALAH 310 (359)
T ss_pred hcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccC-CHHHHhcC
Confidence 221 112222221111112221222222111111112334568999999999999999 99998763
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=363.05 Aligned_cols=373 Identities=23% Similarity=0.227 Sum_probs=298.0
Q ss_pred ccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceecc
Q 001738 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252 (1019)
Q Consensus 173 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 252 (1019)
.-+.||+++|++...-+..|-++++|+++++..|.++ .+|...+...+|+.|+|.+|.|+..-.+++.-++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4678999999999888889999999999999999999 889887888889999999999997777889999999999999
Q ss_pred CCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCC
Q 001738 253 GNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNG 332 (1019)
Q Consensus 253 ~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 332 (1019)
.|.|+ ++|...|..-.++++|+|++|.|+..-...|.++.+|..|.|+.|+|+...+..|.+|++|+.|+|..|+|...
T Consensus 158 rN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 158 RNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 99988 88888877778899999999999988888999999999999999999988889999999999999999998753
Q ss_pred CCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCC
Q 001738 333 AANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412 (1019)
Q Consensus 333 ~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 412 (1019)
. ...+..+.+|+.|.|..|.+. ...-..|..+.++++|+|..|+++..-
T Consensus 237 e------~ltFqgL~Sl~nlklqrN~I~-------------------------kL~DG~Fy~l~kme~l~L~~N~l~~vn 285 (873)
T KOG4194|consen 237 E------GLTFQGLPSLQNLKLQRNDIS-------------------------KLDDGAFYGLEKMEHLNLETNRLQAVN 285 (873)
T ss_pred h------hhhhcCchhhhhhhhhhcCcc-------------------------cccCcceeeecccceeecccchhhhhh
Confidence 2 223455666665555555544 334456777788888888888888777
Q ss_pred chhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhcc
Q 001738 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNIT 492 (1019)
Q Consensus 413 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 492 (1019)
..++.+++.|+.|+||+|.|..+-++.....++|++|+|++|+|+...+.+|..+..|+.|+|++|+++ .+.+
T Consensus 286 ~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e------ 358 (873)
T KOG4194|consen 286 EGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAE------ 358 (873)
T ss_pred cccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHh------
Confidence 778888888888888888888777777777788888888888888777777888888888888888877 4433
Q ss_pred ccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCc---cccCCCCCcEEeccCcccccCCCcccccccccCe
Q 001738 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA---TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV 569 (1019)
Q Consensus 493 ~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 569 (1019)
..|..+++|+.|||++|.|+..+.+ .|.+|++|+.|.|.+|+|+.+...+|..+.+|++
T Consensus 359 ------------------~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~ 420 (873)
T KOG4194|consen 359 ------------------GAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEH 420 (873)
T ss_pred ------------------hHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccce
Confidence 4455667777777777777755443 4667777777777777777555567777777777
Q ss_pred eccccCcCCCCchhhhcccCccceEEccCCcCccc
Q 001738 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGK 604 (1019)
Q Consensus 570 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 604 (1019)
|||.+|.|..+-|.+|..+ .|++|-+..-.|-|.
T Consensus 421 LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 421 LDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCD 454 (873)
T ss_pred ecCCCCcceeecccccccc-hhhhhhhcccceEEe
Confidence 7777777777777777777 777776665555443
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=356.95 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=206.4
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc----cc-hhhHHHHHHHHHHhcCC-CCCcceEEEEEecCC
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT----RK-GAFKSFVAECEALRNIR-HRNLIKIITICSSID 774 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 774 (1019)
...++|.+.+.||+|+||+|+.|.+..+++.||+|++... .. ...+.+.+|+.++++++ ||||++++.++...
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~- 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP- 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC-
Confidence 4567999999999999999999999999999999987643 12 23456778999999998 99999999999988
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC-CC
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-MV 853 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~ 853 (1019)
...|+||||+.||+|.+++...+. +.+.+...+++|++.|++|+|++ ||+||||||+||+++.+ ++
T Consensus 93 ----~~~~ivmEy~~gGdL~~~i~~~g~------l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 93 ----TKIYIVMEYCSGGDLFDYIVNKGR------LKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred ----CeEEEEEEecCCccHHHHHHHcCC------CChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 669999999999999999998543 88999999999999999999999 99999999999999999 99
Q ss_pred eEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCC-CC-CcchHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 001738 854 AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE-AS-MAGDVYSFGILLLEMFIRKRPTDSMFNDGLT 931 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~ 931 (1019)
+||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++. .
T Consensus 160 ~Kl~DFG~s~~~~-------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~ 227 (370)
T KOG0583|consen 160 LKLSDFGLSAISP-------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----N 227 (370)
T ss_pred EEEeccccccccC-------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----c
Confidence 9999999998652 1233445679999999999999977 85 7899999999999999999999761 1
Q ss_pred HHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 932 IHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 932 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
......+..... + ..|..- . ..++..++.+|+..||.+|+ |+.|+++
T Consensus 228 ~~~l~~ki~~~~------------~-----~~p~~~-----~--S~~~~~Li~~mL~~~P~~R~-t~~~i~~ 274 (370)
T KOG0583|consen 228 VPNLYRKIRKGE------------F-----KIPSYL-----L--SPEARSLIEKMLVPDPSTRI-TLLEILE 274 (370)
T ss_pred HHHHHHHHhcCC------------c-----cCCCCc-----C--CHHHHHHHHHHcCCCcccCC-CHHHHhh
Confidence 111111111111 0 011000 0 23468899999999999999 9999983
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=349.24 Aligned_cols=261 Identities=23% Similarity=0.286 Sum_probs=206.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
..++|++.++||+|+||+||+|+.+.+|..+|+|++++. ..++.+.+..|-.+|....+|.||+++..|.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~----- 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK----- 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC-----
Confidence 357899999999999999999999999999999999865 345677889999999999999999999999887
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
++.|+||||++||++.+++...+. +++..++.++.+++.|++.+|+. |+|||||||+|+|||..|++||+|
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~------L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDT------LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCc------CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecc
Confidence 889999999999999999988765 99999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCC-----------------CCCCCC-----C------------------cccccccCCcccCcccccCCC
Q 001738 859 FGLAKFLYTCQV-----------------DDVETP-----S------------------SSIGIKGTVGYVAPEYGMGSE 898 (1019)
Q Consensus 859 fg~a~~~~~~~~-----------------~~~~~~-----~------------------~~~~~~gt~~y~aPE~~~~~~ 898 (1019)
||++.-+..... ...... . .....+|||.|+|||++.+..
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 999954322100 000000 0 012468999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHH
Q 001738 899 ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVA 978 (1019)
Q Consensus 899 ~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~ 978 (1019)
|+..+|.||+|||+|||+.|.+||.+.... +...+. +..... ...|. ..++..+
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~-----~T~rkI--------~nwr~~-------l~fP~------~~~~s~e 418 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQ-----ETYRKI--------VNWRET-------LKFPE------EVDLSDE 418 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH--------HHHhhh-------ccCCC------cCcccHH
Confidence 999999999999999999999999763221 111111 110000 00111 1122355
Q ss_pred HHHHHhhccCCCcCchhH--hHHHHHH
Q 001738 979 VITIGVLCSMESPIDRTL--EMRNVVA 1003 (1019)
Q Consensus 979 l~~l~~~Cl~~dP~~RP~--s~~evl~ 1003 (1019)
..++|.+|+- ||++|-. .++||-+
T Consensus 419 A~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 419 AKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 6889999997 9999984 5666543
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=343.17 Aligned_cols=263 Identities=25% Similarity=0.306 Sum_probs=203.3
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--------------hhhHHHHHHHHHHhcCCCCCcceE
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--------------GAFKSFVAECEALRNIRHRNLIKI 766 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~ 766 (1019)
+..++|++.+.||+|.||.|-+|++..+++.||||++.+... ...+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 456789999999999999999999999999999999964311 113578899999999999999999
Q ss_pred EEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCce
Q 001738 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNV 846 (1019)
Q Consensus 767 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 846 (1019)
+.+..++.. +.+|+|+|||..|.+... .. +...+++.+.++|+++++.||+|||.+ |||||||||+|+
T Consensus 174 iEvLDDP~s---~~~YlVley~s~G~v~w~----p~--d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNL 241 (576)
T KOG0585|consen 174 IEVLDDPES---DKLYLVLEYCSKGEVKWC----PP--DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNL 241 (576)
T ss_pred EEeecCccc---CceEEEEEeccCCccccC----CC--CcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhhe
Confidence 999877654 789999999998876432 11 112289999999999999999999999 999999999999
Q ss_pred EeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCC----CCCcchHHHHHHHHHHHHhCCCCC
Q 001738 847 LLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE----ASMAGDVYSFGILLLEMFIRKRPT 922 (1019)
Q Consensus 847 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~ell~g~~Pf 922 (1019)
|++++|+|||+|||.+.....+.. ..........+|||.|+|||...++. .+.+.||||+||++|.|+.|+.||
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~~~--~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQGSD--EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred EEcCCCcEEeeccceeeecccCCc--cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 999999999999999986633321 11122223468999999999987632 367899999999999999999999
Q ss_pred CCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 923 DSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
.+.. ..+...+.+.+. +. .+...+..+.+.+++.+++.+||+.|. ++.||.
T Consensus 320 ~~~~-----~~~l~~KIvn~p--------L~---------------fP~~pe~~e~~kDli~~lL~KdP~~Ri-~l~~ik 370 (576)
T KOG0585|consen 320 FDDF-----ELELFDKIVNDP--------LE---------------FPENPEINEDLKDLIKRLLEKDPEQRI-TLPDIK 370 (576)
T ss_pred ccch-----HHHHHHHHhcCc--------cc---------------CCCcccccHHHHHHHHHHhhcChhhee-ehhhhe
Confidence 6521 111111111111 10 011123355678999999999999999 999987
Q ss_pred HHHH
Q 001738 1003 AKLC 1006 (1019)
Q Consensus 1003 ~~L~ 1006 (1019)
....
T Consensus 371 ~Hpw 374 (576)
T KOG0585|consen 371 LHPW 374 (576)
T ss_pred ecce
Confidence 6553
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=359.23 Aligned_cols=267 Identities=22% Similarity=0.356 Sum_probs=205.2
Q ss_pred hCCCCCCCceeccccEEEEEEEe-----CCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDS 775 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 775 (1019)
.++|++.++||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|+.+++++ +||||+++++++....
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN- 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence 46899999999999999999975 2345789999987433 23346789999999999 8999999999886542
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCC---------------------------------------------------
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQH--------------------------------------------------- 804 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 804 (1019)
...++||||+++|+|.+++.......
T Consensus 85 ---~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 85 ---GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred ---CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 45789999999999999997542100
Q ss_pred -----CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcc
Q 001738 805 -----DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879 (1019)
Q Consensus 805 -----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~ 879 (1019)
...++++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~-----~~~~~ 233 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-----DYVRK 233 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCc-----chhcc
Confidence 012478889999999999999999999 99999999999999999999999999998653211 11112
Q ss_pred cccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhc
Q 001738 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRT 958 (1019)
Q Consensus 880 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 958 (1019)
....+++.|+|||++.+..++.++|||||||++|||++ |..||....... ........ .. ..
T Consensus 234 ~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~---~~-----~~-------- 296 (338)
T cd05102 234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKD---GT-----RM-------- 296 (338)
T ss_pred cCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhc---CC-----CC--------
Confidence 22346788999999998899999999999999999997 999997532211 11110000 00 00
Q ss_pred cCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 959 NNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 959 ~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
..| ..+...+.+++.+||+.||++|| |++|+++.|+.+..
T Consensus 297 ---~~~--------~~~~~~l~~li~~cl~~dp~~RP-s~~el~~~l~~~~~ 336 (338)
T cd05102 297 ---RAP--------ENATPEIYRIMLACWQGDPKERP-TFSALVEILGDLLQ 336 (338)
T ss_pred ---CCC--------CCCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHHHh
Confidence 000 11234578999999999999999 99999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=324.57 Aligned_cols=278 Identities=22% Similarity=0.276 Sum_probs=207.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch--hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG--AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.++|+....|++|.||.||+|+++.+++.||+|.++.+... ..-...+|+.++.+++|||||.+-.+..... .+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---MDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---cce
Confidence 35788899999999999999999999999999999855432 2234579999999999999999998876543 367
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
+|+|||||+. +|...+..... ++...+++.+..|+++|++|||.+ .|+|||+||+|+|+...|.+||+|||
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 9999999975 99999987652 389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
+|+.+.. +....+..+-|..|+|||.+.+. .|+.+.|+||+|||+.||+++++-|.+...- +-...+...
T Consensus 223 LAR~ygs-------p~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~--dQl~~If~l 293 (419)
T KOG0663|consen 223 LAREYGS-------PLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI--DQLDKIFKL 293 (419)
T ss_pred hhhhhcC-------CcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH--HHHHHHHHH
Confidence 9997643 23345567889999999998875 5999999999999999999999999874332 111111111
Q ss_pred --CC-cchhhccChhhhhhhhccCCCCCCCCCCccHHH--HHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 --LP-QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEE--CLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 --~~-~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~--~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.| +..+.-++..-... .......|...-+..... ..+.=.+++...+.+||.+|. ||+|.++
T Consensus 294 lGtPte~iwpg~~~lp~~k-~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~-tA~~~L~ 360 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVK-KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRI-TAEDGLK 360 (419)
T ss_pred hCCCccccCCCccccchhh-ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccc-cHHHhhc
Confidence 11 11222221110000 011111221111111111 124457888899999999999 9999875
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=366.10 Aligned_cols=272 Identities=26% Similarity=0.407 Sum_probs=222.3
Q ss_pred CccCHHHHHHhhC---------CCCCCCceeccccEEEEEEEeCCCC---EEEEEEEeecc-cchhhHHHHHHHHHHhcC
Q 001738 692 PIVSYAELSKATG---------EFSTSNMIGQGSFGFVYRGILGEGG---LLVAVKVLNLT-RKGAFKSFVAECEALRNI 758 (1019)
Q Consensus 692 ~~~~~~~~~~~~~---------~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l 758 (1019)
..++|+|..++.. ..++.++||.|.||+||+|+.+..| ..||||.++.. ...++.+|..|+.||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 3455665554443 3456789999999999999997655 57999999855 345678899999999999
Q ss_pred CCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEe
Q 001738 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIH 838 (1019)
Q Consensus 759 ~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 838 (1019)
.||||+++.|+.... .-..||+|||++|+|+.|++.+..+ +++.++..+++.||.||+||-+. ++||
T Consensus 688 dHPNIIrLEGVVTks-----~PvMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm---~YVH 754 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKS-----KPVMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDM---NYVH 754 (996)
T ss_pred CCCcEEEEEEEEecC-----ceeEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhc---Cchh
Confidence 999999999999877 5688999999999999999988743 89999999999999999999999 9999
Q ss_pred eccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-
Q 001738 839 GDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI- 917 (1019)
Q Consensus 839 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~- 917 (1019)
|||.++|||++.+-.+|++|||+++.+.++. +......+-.-..+|.|||.+..+++|.+||||||||++||.++
T Consensus 755 RDLAARNILVNsnLvCKVsDFGLSRvledd~----~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSy 830 (996)
T KOG0196|consen 755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDP----EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 830 (996)
T ss_pred hhhhhhheeeccceEEEeccccceeecccCC----CccccccCCccceeecChhHhhhcccCchhhccccceEEEEeccc
Confidence 9999999999999999999999999874433 12222223334689999999999999999999999999999887
Q ss_pred CCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh
Q 001738 918 RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE 997 (1019)
Q Consensus 918 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s 997 (1019)
|..||-++.+. +....+++ .| +-+...+|+..|.++|..||++|-.+|| .
T Consensus 831 GERPYWdmSNQ--dVIkaIe~----------------gy-----------RLPpPmDCP~aL~qLMldCWqkdR~~RP-~ 880 (996)
T KOG0196|consen 831 GERPYWDMSNQ--DVIKAIEQ----------------GY-----------RLPPPMDCPAALYQLMLDCWQKDRNRRP-K 880 (996)
T ss_pred CCCcccccchH--HHHHHHHh----------------cc-----------CCCCCCCCcHHHHHHHHHHHHHHhhcCC-C
Confidence 99999766442 11111111 11 1122356889999999999999999999 9
Q ss_pred HHHHHHHHHHHHH
Q 001738 998 MRNVVAKLCAARE 1010 (1019)
Q Consensus 998 ~~evl~~L~~i~~ 1010 (1019)
+++|+..|.++..
T Consensus 881 F~qiV~~lDklIr 893 (996)
T KOG0196|consen 881 FAQIVSTLDKLIR 893 (996)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988753
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-39 Score=350.10 Aligned_cols=250 Identities=24% Similarity=0.336 Sum_probs=209.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.|-|+.++-||+|+-|.|-+|++..+|+.+|||++.+. .......+.+|+-+|+.+.||||+++|++++.. .
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~-----~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK-----Q 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC-----c
Confidence 46799999999999999999999999999999999754 223356788999999999999999999999987 8
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
+.|+|.||++||.|.+++...+. +++.+..++++||+.|+.|+|.. +|+|||+||+|+++|..+++||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 89999999999999999988775 99999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+|..-. ........+|++.|+|||++.|.+| +.++||||.|||+|.|++|+.||++ .++.....+
T Consensus 157 GMAsLe~--------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLlK 223 (786)
T KOG0588|consen 157 GMASLEV--------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLLK 223 (786)
T ss_pred ceeeccc--------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHHH
Confidence 9998632 2333445689999999999999998 6799999999999999999999974 223222222
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
... ..+++-+ ....+..+++.+|+..||++|. |++||.+.-
T Consensus 224 V~~-G~f~MPs------------------------~Is~eaQdLLr~ml~VDp~~Ri-T~~eI~kHP 264 (786)
T KOG0588|consen 224 VQR-GVFEMPS------------------------NISSEAQDLLRRMLDVDPSTRI-TTEEILKHP 264 (786)
T ss_pred HHc-CcccCCC------------------------cCCHHHHHHHHHHhccCccccc-cHHHHhhCc
Confidence 211 1122211 1133457899999999999999 999998753
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=317.63 Aligned_cols=277 Identities=20% Similarity=0.270 Sum_probs=218.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
..++|++.+.+|+|||+.||.++...+++.||+|++.....+..+..++|++..++++|||+++++++.......+..+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34689999999999999999999998999999999987777777889999999999999999999998877666666889
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|++++|...|+|.+.++....+. ..+++.++++|+.+|++||++||+. .+.++||||||.||++.+++.+++.|||.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg--~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKG--NFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcC--CccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 99999999999999998765432 3489999999999999999999998 33599999999999999999999999999
Q ss_pred ceeccccCCCCCC--CCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 001738 862 AKFLYTCQVDDVE--TPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 862 a~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 936 (1019)
+....-.-....+ .-........|..|+|||.+. +...++++|||||||++|+|+.|..||+.......++.
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla--- 252 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA--- 252 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE---
Confidence 9754221111100 000112235689999999875 34578999999999999999999999975333222111
Q ss_pred HHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 937 MKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 937 ~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
..+..+.+ ..|... ...+.+.+++..|++.||.+|| ++.|++..+..+
T Consensus 253 --------LAv~n~q~---------s~P~~~------~yse~l~~lik~mlqvdP~qRP-~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 --------LAVQNAQI---------SIPNSS------RYSEALHQLIKSMLQVDPNQRP-TIPELLSKLDDL 300 (302)
T ss_pred --------Eeeecccc---------ccCCCC------CccHHHHHHHHHHhcCCcccCC-CHHHHHHHHHhh
Confidence 11111111 111111 1366789999999999999999 999999988765
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=335.53 Aligned_cols=284 Identities=24% Similarity=0.279 Sum_probs=205.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.|+..+++|.|+||.||+|...++++.||||..-.+.+. -.+|+++|+++.|||||++..+|......+.-+..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 567788999999999999999999999999987644332 2479999999999999999998887765434466799
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC-CCeEEeeeccce
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAK 863 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Dfg~a~ 863 (1019)
||||+. +|.++++..... ...++...++-+..||++||+|||+. ||+||||||+|+|+|.+ |.+||||||.|+
T Consensus 101 leymP~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHhchH-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999964 999999863221 12388888999999999999999998 99999999999999976 899999999999
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
.+... .....+..|..|+|||.+.|. .|+.+.||||.|||+.||+.|++-|.+.. ....+.+.+ +.+.-
T Consensus 175 ~L~~~--------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIi-k~lG~ 244 (364)
T KOG0658|consen 175 VLVKG--------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEII-KVLGT 244 (364)
T ss_pred eeccC--------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHH-HHhCC
Confidence 87432 223456779999999998875 69999999999999999999999998732 222222222 22211
Q ss_pred chhhccChhhhhhhhcc--CCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH--HHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTN--NSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA--KLCAARE 1010 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~--~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~--~L~~i~~ 1010 (1019)
...+.+.. +...+... ....+....+-..........+++.++++++|.+|. ++.|++. .+.++++
T Consensus 245 Pt~e~I~~-mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~-~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 245 PTREDIKS-MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRL-SALEALAHPFFDELRD 314 (364)
T ss_pred CCHHHHhh-cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcC-CHHHHhcchhhHHhhC
Confidence 11111110 00010000 000011111111122345578999999999999999 9999875 3444443
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=355.56 Aligned_cols=243 Identities=26% Similarity=0.348 Sum_probs=202.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 778 (1019)
..+|.+.++||+|+||+|++|..+.+++.+|||++++. .++..+..+.|.+++... +||.+++++..|.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~----- 441 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK----- 441 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-----
Confidence 46899999999999999999999999999999999865 355678888999998877 599999999999988
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
++.|+||||+.||++..+.+... +++..++-++..|+.||+|||++ ||||||||.+|||+|.+|++||+|
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~~~~-------F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiAD 511 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIHTDV-------FSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIAD 511 (694)
T ss_pred CeEEEEEEecCCCcEEEEEeccc-------ccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecc
Confidence 88999999999999444333222 99999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||+++.- ......+..++|||.|||||++.+..|+.++|.|||||++|||+.|..||.+..++
T Consensus 512 FGlcKe~-------m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe---------- 574 (694)
T KOG0694|consen 512 FGLCKEG-------MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE---------- 574 (694)
T ss_pred ccccccc-------CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----------
Confidence 9999852 22344667799999999999999999999999999999999999999999863221
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE 997 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s 997 (1019)
+++|..+..++ ..|.. +..+.+.++.+.+.++|++|-.+
T Consensus 575 -------e~FdsI~~d~~-----~yP~~--------ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 -------EVFDSIVNDEV-----RYPRF--------LSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -------HHHHHHhcCCC-----CCCCc--------ccHHHHHHHHHHhccCcccccCC
Confidence 22222222221 11111 24456889999999999999843
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=379.16 Aligned_cols=266 Identities=27% Similarity=0.400 Sum_probs=215.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCC-----EEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGG-----LLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
..-+..+.||+|+||.||.|...... ..||||.++.. +.+...+|.+|+.+|++++|||||+++|++.+.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~---- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS---- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC----
Confidence 34556789999999999999885332 34899998754 455678899999999999999999999999885
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCC-CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEE
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQ-HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 856 (1019)
...+|++|||+||+|..|+++.+.. .....++..+.+.++.|||+|+.||+++ ++|||||..+|+|+++...|||
T Consensus 768 -~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 768 -GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred -CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 5579999999999999999987432 2234589999999999999999999999 9999999999999999999999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~ 935 (1019)
+|||+|+.+...++...... ..-...|||||.+..+.++.|+|||||||++||+++ |..||.+..+. .....
T Consensus 844 aDFGlArDiy~~~yyr~~~~-----a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~v~~~ 916 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGE-----AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--EVLLD 916 (1025)
T ss_pred cccchhHhhhhchheeccCc-----cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--HHHHH
Confidence 99999997665554333221 233578999999999999999999999999999999 88898764321 11110
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhh
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~ 1012 (1019)
+. .+. +-+....|+++++++|..||+.+|++|| ++.++++.+.++....
T Consensus 917 ~~---~gg------------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP-~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 917 VL---EGG------------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRP-SFRTIVEQDPAISNAA 965 (1025)
T ss_pred HH---hCC------------------------ccCCCCCCChHHHHHHHHHccCChhhCc-cHHHHHhhhhhhhhhh
Confidence 00 000 1122345888999999999999999999 9999999998887655
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=331.37 Aligned_cols=283 Identities=25% Similarity=0.307 Sum_probs=212.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhc--CCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRN--IRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
......+.+|+|+||.||+|.. +++.||||++..... +.|..|-+|.+. ++|+||++++++-...+.. ...+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~k---qs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEK---QSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHH---HHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 3455678999999999999999 479999999975543 667777777665 5899999999987665443 3578
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhC------CCCCeEeeccCCCceEeCCCCCeE
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH------CQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
++|+||.+.|+|.+|++.+. ++|....+|+..+++||+|||+. +.++|+|||||++||||..|+++.
T Consensus 284 wLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 99999999999999999886 89999999999999999999975 357899999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCC------CCCcchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE------ASMAGDVYSFGILLLEMFIRKRPTDSMFNDG 929 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~ 929 (1019)
|+|||+|..+.... ......+.+||.+|||||++.+.- .-.+.||||+|.|+|||+++...+......+
T Consensus 357 IaDFGLAl~~~p~~-----~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~ 431 (534)
T KOG3653|consen 357 IADFGLALRLEPGK-----PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE 431 (534)
T ss_pred eeccceeEEecCCC-----CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc
Confidence 99999999876433 334445589999999999987642 2247899999999999999876553211111
Q ss_pred cc--HHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 930 LT--IHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 930 ~~--~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
.. +.+.+ ... +.+.++- ++-..++.+|...........+.-+.+.+..||+.||+.|- |+.=|.+++.+
T Consensus 432 Yqlpfe~ev-G~h-Pt~e~mq------~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARL-TA~Cv~eR~~~ 502 (534)
T KOG3653|consen 432 YQLPFEAEV-GNH-PTLEEMQ------ELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARL-TAGCVEERMAE 502 (534)
T ss_pred ccCchhHHh-cCC-CCHHHHH------HHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhh-hhHHHHHHHHH
Confidence 11 11010 000 0011110 11112334444444444445577789999999999999999 99999999988
Q ss_pred HHHhhh
Q 001738 1008 AREAFL 1013 (1019)
Q Consensus 1008 i~~~~~ 1013 (1019)
+.....
T Consensus 503 l~~~~~ 508 (534)
T KOG3653|consen 503 LMMLWE 508 (534)
T ss_pred HhccCC
Confidence 765443
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=344.01 Aligned_cols=243 Identities=27% Similarity=0.397 Sum_probs=202.7
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
.+-||.|+.|.||+|+.+ ++.||||.++ +.-..+++-|++++||||+.+.|+|... ..+|||||||
T Consensus 129 LeWlGSGaQGAVF~Grl~--netVAVKKV~-------elkETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH--NETVAVKKVR-------ELKETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeeecc--CceehhHHHh-------hhhhhhHHHHHhccCcceeeEeeeecCC-----ceeEEeeecc
Confidence 467999999999999995 7899999875 2224578899999999999999999887 7789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
..|-|...++..+. ++......|.++||.|+.|||.+ .|||||||.-||||..+..|||+|||-++....
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~- 264 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD- 264 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh-
Confidence 99999999998764 88889999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
......+.||..|||||++...+.++|+||||||||+|||+||..||.+..... .++ .+-
T Consensus 265 -------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----IIw--------GVG 324 (904)
T KOG4721|consen 265 -------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----IIW--------GVG 324 (904)
T ss_pred -------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-----eEE--------ecc
Confidence 234456899999999999999999999999999999999999999997532211 001 111
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
...+. -....+|++.+.-++.+||+-.|..|| ++.+++..|....+.
T Consensus 325 sNsL~---------------LpvPstcP~GfklL~Kqcw~sKpRNRP-SFrqil~HldIa~pe 371 (904)
T KOG4721|consen 325 SNSLH---------------LPVPSTCPDGFKLLLKQCWNSKPRNRP-SFRQILLHLDIASPE 371 (904)
T ss_pred CCccc---------------ccCcccCchHHHHHHHHHHhcCCCCCc-cHHHHHHHHhhcCHH
Confidence 11110 011145778899999999999999999 999999998765433
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=350.42 Aligned_cols=347 Identities=22% Similarity=0.228 Sum_probs=261.2
Q ss_pred ccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceecc
Q 001738 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252 (1019)
Q Consensus 173 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 252 (1019)
+|+++.+..|.++ .||...+...+|+.|+|.+|.|+..-.+++..++.|+.||||.|.|+..--.+|..=.++++|+|+
T Consensus 103 nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La 181 (873)
T KOG4194|consen 103 NLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLA 181 (873)
T ss_pred cceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeec
Confidence 4555556666665 666655555566666666666665555666666666666666666663222345554566777777
Q ss_pred CCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCC
Q 001738 253 GNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNG 332 (1019)
Q Consensus 253 ~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 332 (1019)
+|+|+ .+-..-|..+.+|..|.|++|+++...+..|.++++|+.|||..|+|.-.--..|.+|++|+.|.|..|.|..+
T Consensus 182 ~N~It-~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL 260 (873)
T KOG4194|consen 182 SNRIT-TLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKL 260 (873)
T ss_pred ccccc-ccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccc
Confidence 77665 55555555666677777777777655556677777777777777777744456677777777777777777655
Q ss_pred CCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCC
Q 001738 333 AANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412 (1019)
Q Consensus 333 ~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 412 (1019)
.... +..|.+++.|+|..| +++..-..++.+++.|+.|++++|.|..+.
T Consensus 261 ~DG~------Fy~l~kme~l~L~~N-------------------------~l~~vn~g~lfgLt~L~~L~lS~NaI~rih 309 (873)
T KOG4194|consen 261 DDGA------FYGLEKMEHLNLETN-------------------------RLQAVNEGWLFGLTSLEQLDLSYNAIQRIH 309 (873)
T ss_pred cCcc------eeeecccceeecccc-------------------------hhhhhhcccccccchhhhhccchhhhheee
Confidence 4432 223444444444444 444455567888999999999999999999
Q ss_pred chhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhcc
Q 001738 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNIT 492 (1019)
Q Consensus 413 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 492 (1019)
++...-.++|+.|+|++|+|+...+.+|..|..|++|.|++|.++..-..+|..+++|+.|||++|.|+..|.+.
T Consensus 310 ~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDa----- 384 (873)
T KOG4194|consen 310 IDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDA----- 384 (873)
T ss_pred cchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecc-----
Confidence 999999999999999999999888999999999999999999999777889999999999999999999666432
Q ss_pred ccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeecc
Q 001738 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDL 572 (1019)
Q Consensus 493 ~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 572 (1019)
...|.++++|+.|+|.+|+|..+....|.++++|+.|||.+|.|..+-|++|..+ +|++|.+
T Consensus 385 -----------------a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 385 -----------------AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred -----------------hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 3467788999999999999996666789999999999999999999999999998 8998876
Q ss_pred ccC
Q 001738 573 SSN 575 (1019)
Q Consensus 573 ~~N 575 (1019)
..-
T Consensus 447 nSs 449 (873)
T KOG4194|consen 447 NSS 449 (873)
T ss_pred ccc
Confidence 543
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=365.04 Aligned_cols=271 Identities=23% Similarity=0.289 Sum_probs=213.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC-CCCcceEEE-EEecCCCCC-cce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIIT-ICSSIDSHG-VDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~-~~~~~~~~~-~~~ 780 (1019)
-++++.++|.+|||+.||.|++...|..||+|++-..++...+...+|+++|++++ |+|||.+++ ......+.+ ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 35778899999999999999998777999999988777778889999999999996 999999999 444333333 467
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
+++.||||+||.|-+++...... .|++.++++|+.|+++|+++||.. .++|||||||-+|||+..+|+.||||||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~----~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT----RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc----cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 88999999999999999865532 299999999999999999999998 6789999999999999999999999999
Q ss_pred cceeccccCCC--CCCCCCcccccccCCcccCcccc---cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 861 LAKFLYTCQVD--DVETPSSSIGIKGTVGYVAPEYG---MGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 861 ~a~~~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
.|......... +.......-....|+.|+|||++ .+.+.++|+|||||||+||-|+....||+....
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------- 263 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------- 263 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--------
Confidence 99743211100 00000000123579999999975 466899999999999999999999999976311
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhh
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~ 1012 (1019)
..+++ ..| ..|.. ......+.+||..||+.||.+|| ++-+|+..+.+++...
T Consensus 264 ---------laIln----g~Y-----~~P~~------p~ys~~l~~LI~~mL~~nP~~RP-nI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 ---------LAILN----GNY-----SFPPF------PNYSDRLKDLIRTMLQPNPDERP-NIYQVLEEIFELANKP 315 (738)
T ss_pred ---------eeEEe----ccc-----cCCCC------ccHHHHHHHHHHHHhccCcccCC-CHHHHHHHHHHHhcCC
Confidence 11111 111 11111 22367799999999999999999 9999999998887654
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=326.41 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=207.5
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+|++.+.||+|.||.|-+|+....|+.||||.++++ +....-.+.+|++||..++||||+.+|.+|+.. +.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk-----dK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK-----DK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC-----ce
Confidence 4788999999999999999999889999999999754 344455688999999999999999999999877 77
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
..|||||..+|.|++|+.+.+. +++.+.+.+++||+.|+.|+|.+ ++||||+|.+|||+|.++++||+|||
T Consensus 128 IvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred EEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 8999999999999999998775 99999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
++..+.. ......++|++-|.+||++.|.+| ++..|-||+||++|.++.|..||++.+. ...+.+.
T Consensus 199 LSNly~~--------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lvrQI 265 (668)
T KOG0611|consen 199 LSNLYAD--------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLVRQI 265 (668)
T ss_pred hhhhhcc--------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHHHHh
Confidence 9987632 234456899999999999999998 6899999999999999999999986321 1111111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
. .+.| ..|... ....-++++|+..+|++|. |++||...-
T Consensus 266 s------------~GaY-----rEP~~P---------SdA~gLIRwmLmVNP~RRA-TieDiAsHW 304 (668)
T KOG0611|consen 266 S------------RGAY-----REPETP---------SDASGLIRWMLMVNPERRA-TIEDIASHW 304 (668)
T ss_pred h------------cccc-----cCCCCC---------chHHHHHHHHHhcCcccch-hHHHHhhhh
Confidence 1 1111 222211 1125678899999999999 999998754
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=307.06 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=210.1
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
+.++|++.+.||+|.||.||.|+.++++..||+|++.+.. ....+++.+|+++...++||||+++|++|.+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~----- 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS----- 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc-----
Confidence 3468999999999999999999999999999999987542 23346789999999999999999999999887
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+++||..+|++...++..+. ..+++.....+.+|+|.|+.|+|.+ +|+||||||+|+|++..+..||+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhccc----ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccC
Confidence 778999999999999999996553 2388888999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||-+..- ........+||..|.|||...+..++...|+|++|++.||++.|.+||+... .+..+.+...-
T Consensus 168 fGwsV~~---------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~ 237 (281)
T KOG0580|consen 168 FGWSVHA---------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKV 237 (281)
T ss_pred CCceeec---------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHc
Confidence 9998753 2445566899999999999999999999999999999999999999998643 22222211111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
++.+|.. ......+++.+|+.++|.+|. +..|+++.=
T Consensus 238 -------~~~~p~~----------------------is~~a~dlI~~ll~~~p~~r~-~l~~v~~hp 274 (281)
T KOG0580|consen 238 -------DLKFPST----------------------ISGGAADLISRLLVKNPIERL-ALTEVMDHP 274 (281)
T ss_pred -------cccCCcc----------------------cChhHHHHHHHHhccCccccc-cHHHHhhhH
Confidence 1111110 133458899999999999999 999987753
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=344.59 Aligned_cols=268 Identities=25% Similarity=0.400 Sum_probs=202.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCC----------------CCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGE----------------GGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIK 765 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 765 (1019)
.++|++.++||+|+||.||+|.+.. ++..||+|++.... .....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3579999999999999999998632 34579999987543 334567899999999999999999
Q ss_pred EEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCC-------------CCccCCCHHHHHHHHHHHHHHHHHHhhCC
Q 001738 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQ-------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHC 832 (1019)
Q Consensus 766 ~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 832 (1019)
+++++.+. +..++||||+++|+|.+++...... .....+++..+..++.||+.||+|||+.
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 99999876 5689999999999999998654311 1123478889999999999999999999
Q ss_pred CCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHH
Q 001738 833 QPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912 (1019)
Q Consensus 833 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil 912 (1019)
+|+||||||+||+++.++.+||+|||+++...... .........++..|+|||++.+..++.++|||||||++
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 230 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGD-----YYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCc-----eeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence 99999999999999999999999999997653221 11112233457889999999888999999999999999
Q ss_pred HHHHh--CCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCC
Q 001738 913 LEMFI--RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMES 990 (1019)
Q Consensus 913 ~ell~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~d 990 (1019)
|||++ +..||..... ......+............. ..| ..++..+.+++.+||+.|
T Consensus 231 ~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~------------~~~--------~~~~~~~~~li~~cl~~~ 288 (304)
T cd05096 231 WEILMLCKEQPYGELTD--EQVIENAGEFFRDQGRQVYL------------FRP--------PPCPQGLYELMLQCWSRD 288 (304)
T ss_pred HHHHHccCCCCCCcCCH--HHHHHHHHHHhhhccccccc------------cCC--------CCCCHHHHHHHHHHccCC
Confidence 99987 5567764321 11111111111100000000 000 112456899999999999
Q ss_pred cCchhHhHHHHHHHHH
Q 001738 991 PIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 991 P~~RP~s~~evl~~L~ 1006 (1019)
|++|| |++||.+.|+
T Consensus 289 p~~RP-s~~~i~~~l~ 303 (304)
T cd05096 289 CRERP-SFSDIHAFLT 303 (304)
T ss_pred chhCc-CHHHHHHHHh
Confidence 99999 9999988875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-38 Score=343.15 Aligned_cols=246 Identities=26% Similarity=0.316 Sum_probs=199.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ-----RF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC-----Ce
Confidence 47899999999999999999999899999999987432 23345688999999999999999999887765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++|+|.+++..... +++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSGR------FSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 8999999999999999976543 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+++.... ......|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+......
T Consensus 147 ~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i~ 211 (291)
T cd05612 147 FAKKLRD----------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKIL 211 (291)
T ss_pred cchhccC----------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH
Confidence 9975421 11234689999999999988899999999999999999999999965311 11111110
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-----HHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE-----MRNVVAK 1004 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s-----~~evl~~ 1004 (1019)
... . ..| ......+.+++.+||+.||.+|| + ++|+++.
T Consensus 212 ~~~--------~---------~~~--------~~~~~~~~~li~~~l~~dp~~R~-~~~~~~~~~~l~h 254 (291)
T cd05612 212 AGK--------L---------EFP--------RHLDLYAKDLIKKLLVVDRTRRL-GNMKNGADDVKNH 254 (291)
T ss_pred hCC--------c---------CCC--------ccCCHHHHHHHHHHcCCCHHHcc-CCccCCHHHHhcC
Confidence 000 0 000 00133468999999999999999 6 7777654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=345.85 Aligned_cols=200 Identities=25% Similarity=0.378 Sum_probs=176.7
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.+.||+|+||.||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CEE
Confidence 368999999999999999999999999999999997543 33456789999999999999999999998776 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++++|.+++..... +++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAKR------IPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 999999999999999976543 889999999999999999999852 699999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+..... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~---------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLID---------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccccc---------cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 875422 112235689999999999998999999999999999999999999964
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=336.58 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=199.1
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccchh---hHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
...||+|++|.||+|.+ +|+.||||+++...... .+.+.+|+.++++++||||+++++++.+... +....++||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~-~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD-DLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEeccc-CCCceEEEE
Confidence 36899999999999998 68999999997543322 4678899999999999999999999876211 115689999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++.....++.|++.|++|||+.. +++||||||+||+++.++.+||+|||+++..
T Consensus 102 Ey~~~g~L~~~l~~~~~------~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~ 173 (283)
T PHA02988 102 EYCTRGYLREVLDKEKD------LSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKIL 173 (283)
T ss_pred EeCCCCcHHHHHhhCCC------CChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence 99999999999986543 889999999999999999999732 7889999999999999999999999999754
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
... .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......... ..
T Consensus 174 ~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i~~---~~ 238 (283)
T PHA02988 174 SSP----------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLIIN---KN 238 (283)
T ss_pred ccc----------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHh---cC
Confidence 211 123467899999999876 6799999999999999999999999975321 111111100 00
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
. ++.. + ..+...+.+++.+||+.||++|| |++|+++.|+.+..
T Consensus 239 ------------~------~~~~--~---~~~~~~l~~li~~cl~~dp~~Rp-s~~ell~~l~~~~~ 281 (283)
T PHA02988 239 ------------N------SLKL--P---LDCPLEIKCIVEACTSHDSIKRP-NIKEILYNLSLYKF 281 (283)
T ss_pred ------------C------CCCC--C---CcCcHHHHHHHHHHhcCCcccCc-CHHHHHHHHHHHHh
Confidence 0 0000 0 12355689999999999999999 99999999987653
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=350.90 Aligned_cols=282 Identities=22% Similarity=0.267 Sum_probs=203.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|++..+++.||||+++.. ......++.+|++++++++||||+++++++...........|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999999989999999998643 223345688999999999999999999988765444335689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||++ ++|.+++..... +++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKANDD------LTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhccc------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 699999876543 89999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+....... .........||+.|+|||++.+ ..++.++|||||||++|||++|++||...... ...+......
T Consensus 151 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~ 224 (338)
T cd07859 151 RVAFNDTP----TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLL 224 (338)
T ss_pred cccccccC----ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHh
Confidence 75422111 1112234578999999999865 57899999999999999999999999753211 1111111111
Q ss_pred Ccc----hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 941 PQR----VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 941 ~~~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
... ...+................|.. ...........+.+++.+||+.||++|| |++|+++.
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rp-t~~e~l~h 290 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVP-FSQKFPNADPLALRLLERLLAFDPKDRP-TAEEALAD 290 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCc-hHHhcCCCChHHHHHHHHHcCcCcccCC-CHHHHhcC
Confidence 100 00000000000000000000100 0000011234578999999999999999 99999864
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=337.39 Aligned_cols=253 Identities=23% Similarity=0.298 Sum_probs=200.1
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|+..+.||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++|++|+++++++.+. +..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~-----~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-----CeE
Confidence 3778899999999999999998899999999986432 22334578899999999999999999998776 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999988865432 2389999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+.......
T Consensus 149 ~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~ 218 (285)
T cd05631 149 AVQIPEGE--------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRVK 218 (285)
T ss_pred cEEcCCCC--------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHhh
Confidence 97642211 1123568999999999999999999999999999999999999997532211 1111111110
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-----HHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE-----MRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s-----~~evl~~ 1004 (1019)
..... + . ......+.+++.+||+.||.+|| + ++|+++.
T Consensus 219 ~~~~~-~--------------------~---~~~s~~~~~li~~~l~~~P~~R~-~~~~~~~~~~~~h 261 (285)
T cd05631 219 EDQEE-Y--------------------S---EKFSEDAKSICRMLLTKNPKERL-GCRGNGAAGVKQH 261 (285)
T ss_pred ccccc-C--------------------C---ccCCHHHHHHHHHHhhcCHHHhc-CCCCCCHHHHhcC
Confidence 00000 0 0 11234578999999999999999 7 7888763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=342.06 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=212.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|...+++|+|+||.++.++++.+++.||+|.+.... ...++...+|+.++++++|||||.+.+.|...+ ...
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----QLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----ceE
Confidence 57899999999999999999999999999999997543 334456789999999999999999999988762 348
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
+|||+||+||++.+.+...+. ..++++.+..|+.|++.|+.|||++ +|+|||||+.||+++.++.|||+|||+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhh
Confidence 999999999999999988763 3499999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
|+...... .......||+.||+||++.+.+|..|+|||||||++|||++-+++|.+.. +...+.+..+
T Consensus 153 aK~l~~~~-------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~~ 220 (426)
T KOG0589|consen 153 AKILNPED-------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKINR 220 (426)
T ss_pred hhhcCCch-------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHhh
Confidence 99874322 24456789999999999999999999999999999999999999997632 2222222221
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. ++|.- .....++..++..|++.+|..|| ++.+++..
T Consensus 221 ~~----~~Plp--------------------~~ys~el~~lv~~~l~~~P~~RP-sa~~LL~~ 258 (426)
T KOG0589|consen 221 GL----YSPLP--------------------SMYSSELRSLVKSMLRKNPEHRP-SALELLRR 258 (426)
T ss_pred cc----CCCCC--------------------ccccHHHHHHHHHHhhcCCccCC-CHHHHhhC
Confidence 11 11110 11255688999999999999999 99999987
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=347.30 Aligned_cols=246 Identities=24% Similarity=0.277 Sum_probs=200.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++... +.
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE-----NR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC-----CE
Confidence 57999999999999999999999899999999997432 23346788999999999999999999999876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGR------FPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 8999999999999999986543 88999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......
T Consensus 164 ~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~ 228 (329)
T PTZ00263 164 FAKKVPD----------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIYEKIL 228 (329)
T ss_pred CceEcCC----------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHHHHHh
Confidence 9986422 1123578999999999999899999999999999999999999996421 111111111
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-----HHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE-----MRNVVAK 1004 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s-----~~evl~~ 1004 (1019)
... + ..|. ....++.+++.+||+.||.+|| + ++|+++.
T Consensus 229 ~~~--------~---------~~p~--------~~~~~~~~li~~~L~~dP~~R~-~~~~~~~~~ll~h 271 (329)
T PTZ00263 229 AGR--------L---------KFPN--------WFDGRARDLVKGLLQTDHTKRL-GTLKGGVADVKNH 271 (329)
T ss_pred cCC--------c---------CCCC--------CCCHHHHHHHHHHhhcCHHHcC-CCCCCCHHHHhcC
Confidence 000 0 0000 0123568999999999999999 5 6777643
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=340.79 Aligned_cols=274 Identities=20% Similarity=0.263 Sum_probs=202.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|++++++++||||+++++++... +..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR-----GKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-----CEE
Confidence 47999999999999999999999899999999987442 23346778999999999999999999998765 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++++.+..+..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPN------GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 99999999887766544322 289999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH--HHHh
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF--AMKA 939 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~ 939 (1019)
+....... ........|++.|+|||++.+..++.++||||+||++|||++|++||......+ ..... ....
T Consensus 147 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 219 (287)
T cd07848 147 ARNLSEGS------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGP 219 (287)
T ss_pred cccccccc------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCC
Confidence 98653211 111223568999999999998889999999999999999999999997632211 11110 0011
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCc-----cHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRG-----GIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+.......... .... ....|...... ........+.+++.+|+++||++|| |++|+++
T Consensus 220 ~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~-s~~~~l~ 283 (287)
T cd07848 220 LPAEQMKLFYSN--PRFH--GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRY-LTEQCLN 283 (287)
T ss_pred CCHHHHHhhhcc--chhc--ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCC-CHHHHhc
Confidence 111111000000 0000 00001100000 0112345689999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=351.32 Aligned_cols=265 Identities=23% Similarity=0.373 Sum_probs=204.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDS 775 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 775 (1019)
.++|++.+.||+|+||.||+|++.. ++..||+|+++... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~-- 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG-- 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--
Confidence 4579999999999999999998643 33579999997543 33456788999999999 899999999998776
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCC----------------------------------------------------
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQ---------------------------------------------------- 803 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 803 (1019)
...++||||+++|+|.++++.....
T Consensus 115 ---~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 115 ---GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred ---CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 6789999999999999998653210
Q ss_pred ------------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCC
Q 001738 804 ------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871 (1019)
Q Consensus 804 ------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 871 (1019)
....++++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~-- 266 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS-- 266 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCc--
Confidence 0112478899999999999999999999 99999999999999999999999999997653221
Q ss_pred CCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhccCh
Q 001738 872 DVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDP 950 (1019)
Q Consensus 872 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 950 (1019)
.........++..|+|||++.+..++.++|||||||++|||++ |+.||....... .............
T Consensus 267 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~~------- 335 (374)
T cd05106 267 ---NYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQMS------- 335 (374)
T ss_pred ---ceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCcc-------
Confidence 1111122345678999999988899999999999999999997 999997642211 1111111000000
Q ss_pred hhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 951 LLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 951 ~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
.| . .....+.+++.+||+.||++|| |+++|++.|+++.
T Consensus 336 ------------~~--~------~~~~~l~~li~~cl~~dp~~RP-s~~~l~~~l~~~~ 373 (374)
T cd05106 336 ------------RP--D------FAPPEIYSIMKMCWNLEPTERP-TFSQISQLIQRQL 373 (374)
T ss_pred ------------CC--C------CCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHHh
Confidence 00 0 0134578999999999999999 9999999998864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=344.64 Aligned_cols=262 Identities=26% Similarity=0.383 Sum_probs=208.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCC----EEEEEEEeec---ccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGG----LLVAVKVLNL---TRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDS 775 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 775 (1019)
.++-...++||+|+||+||+|+.+..+ ..||||..+. ......+++++|+++|++++|||||++||++...
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~-- 233 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE-- 233 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--
Confidence 345556699999999999999986432 2389999885 2356778999999999999999999999999887
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
.-.++|||+|.||+|.++++.... .++..+...++.+.|.||+|||++ +++||||.++|+|++.++.+|
T Consensus 234 ---~Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 234 ---EPLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred ---CccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEE
Confidence 457999999999999999998764 389999999999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~ 934 (1019)
|+|||+++.-.. .........-+..|+|||.+..+.|++++|||||||++||+++ |..||.+.... ....
T Consensus 303 ISDFGLs~~~~~-------~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~ 373 (474)
T KOG0194|consen 303 ISDFGLSRAGSQ-------YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKA 373 (474)
T ss_pred eCccccccCCcc-------eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHH
Confidence 999999875320 0000101134689999999999999999999999999999999 88899764322 1111
Q ss_pred HHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhhh
Q 001738 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013 (1019)
Q Consensus 935 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~~ 1013 (1019)
++ ....... |.. ...+..+..++.+||..+|++|| +|.++.+.++.+.....
T Consensus 374 kI---~~~~~r~-----------------~~~------~~~p~~~~~~~~~c~~~~p~~R~-tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 374 KI---VKNGYRM-----------------PIP------SKTPKELAKVMKQCWKKDPEDRP-TMSTIKKKLEALEKKKE 425 (474)
T ss_pred HH---HhcCccC-----------------CCC------CCCHHHHHHHHHHhccCChhhcc-CHHHHHHHHHHHHhccc
Confidence 11 1111100 000 02255678888899999999999 99999999999876654
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=349.27 Aligned_cols=263 Identities=24% Similarity=0.373 Sum_probs=203.5
Q ss_pred hCCCCCCCceeccccEEEEEEEe-----CCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDS 775 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 775 (1019)
.++|++.+.||+|+||.||+|++ ..++..||||+++... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 45799999999999999999974 3456789999997443 33456788999999999 899999999999776
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCC----------------------------------------------------
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQ---------------------------------------------------- 803 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 803 (1019)
...++||||+++|+|.++++.....
T Consensus 112 ---~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 112 ---GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ---CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 6689999999999999999754310
Q ss_pred -----------------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 804 -----------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 804 -----------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
.....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0112478999999999999999999999 99999999999999999999999999998653
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
... .........++..|+|||++.+..++.++|||||||++|||++ |..||.....+. ...+.......
T Consensus 266 ~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~---- 335 (375)
T cd05104 266 NDS-----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEGYR---- 335 (375)
T ss_pred Ccc-----cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhCcc----
Confidence 221 1111122345678999999999999999999999999999998 888986532221 11111110000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
. ..| .....++.+++.+||+.||++|| |++||++.|++
T Consensus 336 ~---------------~~~--------~~~~~~l~~li~~cl~~dP~~RP-s~~eil~~l~~ 373 (375)
T cd05104 336 M---------------LSP--------ECAPSEMYDIMKSCWDADPLKRP-TFKQIVQLIEQ 373 (375)
T ss_pred C---------------CCC--------CCCCHHHHHHHHHHccCChhHCc-CHHHHHHHHHh
Confidence 0 000 00134578999999999999999 99999999975
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=371.50 Aligned_cols=482 Identities=29% Similarity=0.377 Sum_probs=394.6
Q ss_pred EeeeccCCCCccccCcCCCcccceeccCCCccCCCCCc-ccCCCCCcceecccCccccCCCCccccCCcchhhhhhcccc
Q 001738 80 LYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPH-EVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNN 158 (1019)
Q Consensus 80 l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n~~~g~~p~-~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~ 158 (1019)
+|.++..+. .||..+-.-..++.|+++.|.+- ..|- .+.+.-+|+.|||++|+++ .+|..+..+.
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~----------- 68 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLS----------- 68 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHH-----------
Confidence 455555554 45555666666888999998776 3342 3445556999999999987 7787776554
Q ss_pred ccccccccccccccccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCC
Q 001738 159 LVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPP 238 (1019)
Q Consensus 159 ~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 238 (1019)
+|+.|.++.|.+. ..|.+..++.+|++|.|.+|.+. .+|..+..+++|++|++++|++. .+|.
T Consensus 69 --------------~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl 131 (1081)
T KOG0618|consen 69 --------------HLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPL 131 (1081)
T ss_pred --------------HHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCch
Confidence 4777888888887 78888889999999999999988 78999999999999999999988 7888
Q ss_pred cccccccccceeccCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccC
Q 001738 239 SIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQN 318 (1019)
Q Consensus 239 ~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 318 (1019)
.+..+..++.+..++|..+..++. ..++.+++..|.+.+.++..+.+++. .|||.+|.+. -..+..+.+
T Consensus 132 ~i~~lt~~~~~~~s~N~~~~~lg~------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~ 200 (1081)
T KOG0618|consen 132 VIEVLTAEEELAASNNEKIQRLGQ------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLAN 200 (1081)
T ss_pred hHHhhhHHHHHhhhcchhhhhhcc------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccc
Confidence 888899999999999933322322 23788888999998888888888777 7999999987 234677888
Q ss_pred cccccccCccCCCCCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCc
Q 001738 319 LSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNL 398 (1019)
Q Consensus 319 L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L 398 (1019)
|+.|....|++..+.. .-++|+.|+.++|.++... ..-.+..+.++++++|+++ .+|++++.+.+|
T Consensus 201 l~~l~c~rn~ls~l~~----------~g~~l~~L~a~~n~l~~~~---~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nl 266 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEI----------SGPSLTALYADHNPLTTLD---VHPVPLNLQYLDISHNNLS-NLPEWIGACANL 266 (1081)
T ss_pred hhhhhhhhcccceEEe----------cCcchheeeeccCcceeec---cccccccceeeecchhhhh-cchHHHHhcccc
Confidence 9999999998875432 2457889999999988332 2334667778999999999 566999999999
Q ss_pred CeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcc-ccc-ccchhccc
Q 001738 399 NGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG-NCR-SLLSLNVS 476 (1019)
Q Consensus 399 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~-~L~~L~L~ 476 (1019)
+.++..+|+++ .+|..+...++|+.|++..|.++ .+|....+++.|+.|+|..|+|. ..|+.+- -.. +|..|+.+
T Consensus 267 e~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s 343 (1081)
T KOG0618|consen 267 EALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVS 343 (1081)
T ss_pred eEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhh
Confidence 99999999996 89999999999999999999999 78888899999999999999998 5666443 333 37889999
Q ss_pred cccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccC
Q 001738 477 QNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG 556 (1019)
Q Consensus 477 ~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 556 (1019)
.|++. ..|..=....+.+..|.+.+|.+++..-..+.++..|+.|+|++|+|.......+.++..|++|+||+|+++ .
T Consensus 344 ~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~ 421 (1081)
T KOG0618|consen 344 SNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-T 421 (1081)
T ss_pred hcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-h
Confidence 99998 677544455566778999999999999889999999999999999998555567789999999999999999 8
Q ss_pred CCcccccccccCeeccccCcCCCCchhhhcccCccceEEccCCcCccc-cCCCCccCCccccccccCCc
Q 001738 557 IPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGK-VPTKGVFSNKTRISLSGNGK 624 (1019)
Q Consensus 557 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~~~~~~~~~~~~~~N~~ 624 (1019)
+|..+..+..|++|...+|+|. ..| .+..++.|+.+|+|.|+|+-. +|.....++++.++++||+|
T Consensus 422 Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 422 LPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 8999999999999999999998 677 899999999999999999753 34434448899999999998
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=338.44 Aligned_cols=275 Identities=20% Similarity=0.290 Sum_probs=199.5
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.+.||+|+||+||+|++..+++.||+|+++.... .....+.+|+.++++++||||+++++++.+. ...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK-----ETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC-----CeE
Confidence 4689999999999999999999998999999999874432 2234677899999999999999999998876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++ +++.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999995 688888765432 288899999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+...... ........|++.|+|||++.+ ..++.++||||+||++|||++|..||.+............ ...
T Consensus 150 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~ 221 (303)
T cd07869 150 ARAKSVP-------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF-LVL 221 (303)
T ss_pred ceeccCC-------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH-HHh
Confidence 8753211 112233567999999998865 4588999999999999999999999976432111111111 111
Q ss_pred CcchhhccChhh-hhhhhccCCCCCCCCCCccHHH------HHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPLL-LLEVRTNNSKNPCGDGRGGIEE------CLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~l-~~~~~~~~~~~p~~~~~~~~~~------~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.....+...... ...+...... ......... ....+.+++.+|++.||++|| |++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~-s~~~~l~ 287 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPERFT---LYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRL-SAQAALS 287 (303)
T ss_pred CCCChhhccchhhcccccccccc---ccCCccHHHHhhccCCChHHHHHHHHHhccCchhcc-CHHHHhc
Confidence 000000000000 0000000000 000000000 123567899999999999999 9999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=345.97 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=203.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++... +.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD-----EY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC-----CE
Confidence 47999999999999999999999889999999997542 23346688999999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++++|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLGV------LSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 8999999999999999976543 88999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++..... ......||+.|+|||++.+..++.++||||+||++|||++|..||...... ........ .
T Consensus 147 ~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~~-~ 213 (333)
T cd05600 147 LSKGIVT----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKY-W 213 (333)
T ss_pred CCccccc----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--HHHHHHHh-c
Confidence 9975421 223457899999999999989999999999999999999999999753211 11111000 0
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. ..+. .|... .........+.+++.+|+..+|.+|| +++|+++.
T Consensus 214 ~----~~~~-------------~~~~~--~~~~~~s~~~~~li~~~l~~~~~rr~-s~~~ll~h 257 (333)
T cd05600 214 K----ETLQ-------------RPVYD--DPRFNLSDEAWDLITKLINDPSRRFG-SLEDIKNH 257 (333)
T ss_pred c----cccc-------------CCCCC--ccccccCHHHHHHHHHHhhChhhhcC-CHHHHHhC
Confidence 0 0000 00000 00012245678999999999999999 99999875
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=340.94 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=175.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.+.||+|+||.||+|++..+++.+|+|+++... ....+.+.+|++++++++||||+++++++.+. ++.
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CEE
Confidence 368999999999999999999999899999999987543 33456789999999999999999999999876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++++|.+++..... +++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 999999999999999976543 789999999999999999999742 799999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 151 SGQLIDS---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred chhhhhh---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 8754221 11234689999999999988899999999999999999999999975
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=342.91 Aligned_cols=243 Identities=23% Similarity=0.278 Sum_probs=195.0
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||.||+|++..+|+.||+|+++... ......+.+|++++++++||||+++++++... +..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH-----DRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC-----CEEEEEEe
Confidence 46999999999999999899999999997532 33445678899999999999999999998876 67899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++|+|.+++..... +++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRERV------FSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 9999999999976543 89999999999999999999999 99999999999999999999999999987431
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhh
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIE 946 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1019)
. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...........
T Consensus 147 ~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~~~~~~--- 211 (323)
T cd05571 147 S-------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEE--- 211 (323)
T ss_pred c-------CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCC---
Confidence 1 11122345799999999999999999999999999999999999999965211 11111110000
Q ss_pred ccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhH----hHHHHHH
Q 001738 947 IVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTL----EMRNVVA 1003 (1019)
Q Consensus 947 ~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~----s~~evl~ 1003 (1019)
. ..| .....++.+++.+||+.||++||. ++.++++
T Consensus 212 ---~-----------~~p--------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 212 ---I-----------RFP--------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ---C-----------CCC--------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 0 000 012345789999999999999993 4777654
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=320.58 Aligned_cols=274 Identities=25% Similarity=0.343 Sum_probs=217.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC--CCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI--RHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..+..+.+.||+|.||+||+|+|+ |+.||||+|...++ +.+.+|.++.+.. +|+||+.+++.-.... .....
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEE
Confidence 356778899999999999999995 89999999975543 5667788887764 9999999998755443 33478
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeeccCCCceEeCCCCCeE
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH-----CQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
.|+|++|.|.|||+||+..+. ++....++++..+|.||+|||.. ..|.|+|||||+.|||+..++.+.
T Consensus 284 LwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred EEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 999999999999999999865 89999999999999999999964 467899999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC------CCCCcchHHHHHHHHHHHHhCC----------
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS------EASMAGDVYSFGILLLEMFIRK---------- 919 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlGvil~ell~g~---------- 919 (1019)
|+|+|+|........ .........+||.+|||||++... +.-..+||||||.|+||++.+.
T Consensus 357 IADLGLAv~h~~~t~---~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTD---TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred EeeceeeEEecccCC---cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 999999987644321 122233456899999999998653 2235799999999999998643
Q ss_pred CCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 920 RPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 920 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
.||.+....+.++.+......- ...+|..+.++...++...+.++|..||..+|..|- |+=
T Consensus 434 ~Pyyd~Vp~DPs~eeMrkVVCv------------------~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRl-tAL 494 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMRKVVCV------------------QKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARL-TAL 494 (513)
T ss_pred CCcccCCCCCCCHHHHhcceee------------------cccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhh-HHH
Confidence 5666655555554443322222 223455556666778899999999999999999999 999
Q ss_pred HHHHHHHHHHHh
Q 001738 1000 NVVAKLCAAREA 1011 (1019)
Q Consensus 1000 evl~~L~~i~~~ 1011 (1019)
.+-+.|.++.+.
T Consensus 495 riKKtl~~l~~~ 506 (513)
T KOG2052|consen 495 RIKKTLAKLSNS 506 (513)
T ss_pred HHHHHHHHHhcC
Confidence 999999887653
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=337.20 Aligned_cols=274 Identities=21% Similarity=0.278 Sum_probs=200.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.++||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE-----RCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC-----CeEE
Confidence 57999999999999999999999899999999987443 22345678999999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++ +|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred EEEeCCCc-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 99999974 99998875432 278899999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+..... ........|++.|+|||++.+ ..++.++||||+||++|||++|++||...... ...........
T Consensus 151 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~ 221 (288)
T cd07871 151 RAKSVP-------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--EELHLIFRLLG 221 (288)
T ss_pred eeccCC-------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhC
Confidence 754211 112233467999999998865 56899999999999999999999999753221 11111111111
Q ss_pred cchhhccChhh-hhhhhccCCCCCCCCCCc---cHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QRVIEIVDPLL-LLEVRTNNSKNPCGDGRG---GIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l-~~~~~~~~~~~p~~~~~~---~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
....+...... ..++.. ...|...... ..........+++.+|++.||.+|| |++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~-t~~~~l~ 284 (288)
T cd07871 222 TPTEETWPGITSNEEFRS--YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRI-SAEAALR 284 (288)
T ss_pred CCChHHhhccccchhhhc--cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCC-CHHHHhc
Confidence 11111100000 000000 0001000000 0001234568999999999999999 9999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=319.39 Aligned_cols=284 Identities=21% Similarity=0.325 Sum_probs=208.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCC-cceEEEEEecCCC-CCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRN-LIKIITICSSIDS-HGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~-~~~~ 779 (1019)
..|...++||+|+||+||+|+.+.+|+.||+|++....+ .......+|+.+++.++|+| |+++++++.+... ....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 356667889999999999999999999999999986544 34456789999999999999 9999999987642 2224
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++|+||++ -+|..++....... ..++...++.+++||++||+|+|++ +|+||||||+||+++++|.+||+||
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 7889999995 59999998866321 2377789999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+|+...- .....+..++|..|+|||++.+. .|+...||||+|||++||+++++-|.+..+. .........
T Consensus 165 GlAra~~i-------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-~ql~~If~~ 236 (323)
T KOG0594|consen 165 GLARAFSI-------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-DQLFRIFRL 236 (323)
T ss_pred chHHHhcC-------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-HHHHHHHHH
Confidence 99985421 12224456789999999999887 6999999999999999999999999875331 111111111
Q ss_pred -hCCc-c-hhhccChhhhhhhhccCCCCCCCCCCccHHH----HHHHHHHHHhhccCCCcCchhHhHHHHHHH--HHHH
Q 001738 939 -ALPQ-R-VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEE----CLVAVITIGVLCSMESPIDRTLEMRNVVAK--LCAA 1008 (1019)
Q Consensus 939 -~~~~-~-~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~----~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~--L~~i 1008 (1019)
..|. . +..+.. ..+++. ..|.......... ......+++.+|++++|++|. |++.++++ +..+
T Consensus 237 lGtP~e~~Wp~v~~---~~~~k~---~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~-Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 237 LGTPNEKDWPGVSS---LPDYKA---PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRI-SAKGALTHPYFSEL 308 (323)
T ss_pred cCCCCccCCCCccc---cccccc---cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCc-CHHHHhcChhhccc
Confidence 0111 1 111110 011110 1111110111111 112468899999999999999 99999886 5444
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=342.72 Aligned_cols=248 Identities=24% Similarity=0.282 Sum_probs=198.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCC-EEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGG-LLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+++++.++||||+++++++.+.
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----- 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-----
Confidence 357999999999999999999876444 78999998643 233456788999999999999999999999876
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||+++|+|.+++..... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKR------FPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 678999999999999999986543 89999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... ..
T Consensus 175 FG~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~~~---~~ 239 (340)
T PTZ00426 175 FGFAKVVDT----------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP--LLIY---QK 239 (340)
T ss_pred CCCCeecCC----------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH--HHHH---HH
Confidence 999986421 12245789999999999988899999999999999999999999975311 1111 11
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhH----hHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTL----EMRNVVAK 1004 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~----s~~evl~~ 1004 (1019)
..... ...|. .....+.+++.+|++.||++|++ +++|+++.
T Consensus 240 i~~~~-----------------~~~p~--------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 240 ILEGI-----------------IYFPK--------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HhcCC-----------------CCCCC--------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 10000 00010 01234678999999999999942 78887654
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=329.61 Aligned_cols=256 Identities=23% Similarity=0.337 Sum_probs=201.8
Q ss_pred CCCCCCCceeccccEEEEEEEeC---CCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILG---EGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.+|++.+.||+|+||.||+|.+. ..+..||+|+++... ......+.+|+.++++++||||+++++++... +
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG-----N 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC-----C
Confidence 46889999999999999999864 356789999987543 23346788999999999999999999998765 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.+|++||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEG-----QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCC
Confidence 78999999999999999976432 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.+....... ........++..|+|||.+.+..++.++|||||||++||+++ |..||...... ...+....
T Consensus 152 g~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~ 223 (266)
T cd05064 152 RRLQEDKSEA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVED 223 (266)
T ss_pred cccccccccc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHC
Confidence 9876431111 111112345678999999998999999999999999999775 99999653211 11111100
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
. . ..|. ...++..+.+++.+||+.+|.+|| +++|+.+.|..+
T Consensus 224 ----~----~-------------~~~~------~~~~~~~~~~li~~c~~~~p~~RP-~~~~i~~~l~~~ 265 (266)
T cd05064 224 ----G----F-------------RLPA------PRNCPNLLHQLMLDCWQKERGERP-RFSQIHSILSKM 265 (266)
T ss_pred ----C----C-------------CCCC------CCCCCHHHHHHHHHHcCCCchhCC-CHHHHHHHHHhh
Confidence 0 0 0000 012355688999999999999999 999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=332.10 Aligned_cols=270 Identities=27% Similarity=0.427 Sum_probs=211.4
Q ss_pred CCCCCCCceeccccEEEEEEEe-----CCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|.+.+.||+|+||.||++.. ..++..+|+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence 4788999999999999999985 234567999998766555667899999999999999999999998765
Q ss_pred ceEEEEEeeccCCCHHHHHhccCC-------CCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSND-------QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD 851 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 851 (1019)
+..++||||+++++|.+++..... ......+++..++.++.|++.||+|||++ |++||||||+||+++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 678999999999999999975432 11223489999999999999999999999 99999999999999999
Q ss_pred CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 001738 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGL 930 (1019)
Q Consensus 852 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~ 930 (1019)
+.+||+|||.++...... .........++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 157 ~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-- 229 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-- 229 (288)
T ss_pred CcEEeccCCccccccCCc-----eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999997543221 1111122345788999999998889999999999999999998 89998653211
Q ss_pred cHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 931 TIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
... ........... + ..+...+.+++.+||+.||.+|| |++|+.+.|+++..
T Consensus 230 ~~~---~~i~~~~~~~~----------------~--------~~~~~~l~~li~~~l~~~p~~Rp-t~~~v~~~l~~~~~ 281 (288)
T cd05093 230 EVI---ECITQGRVLQR----------------P--------RTCPKEVYDLMLGCWQREPHMRL-NIKEIHSLLQNLAK 281 (288)
T ss_pred HHH---HHHHcCCcCCC----------------C--------CCCCHHHHHHHHHHccCChhhCC-CHHHHHHHHHHHHH
Confidence 111 11110000000 0 01234589999999999999999 99999999999987
Q ss_pred hhhhhh
Q 001738 1011 AFLSVY 1016 (1019)
Q Consensus 1011 ~~~~~~ 1016 (1019)
.....+
T Consensus 282 ~~~~~~ 287 (288)
T cd05093 282 ASPVYL 287 (288)
T ss_pred hccccc
Confidence 654433
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=339.47 Aligned_cols=240 Identities=24% Similarity=0.315 Sum_probs=192.8
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++... +..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP-----EKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC-----CeEEEEEcCC
Confidence 69999999999999989999999998743 233456778899999999999999999998776 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQREGR------FDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999999976543 89999999999999999999999 9999999999999999999999999998753211
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..........
T Consensus 147 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~~---- 210 (312)
T cd05585 147 -------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEPL---- 210 (312)
T ss_pred -------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCC----
Confidence 112234578999999999999999999999999999999999999996521 1111111111100
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh---HHHHHH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE---MRNVVA 1003 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s---~~evl~ 1003 (1019)
..| ......+.+++.+||+.||++|| + ++|++.
T Consensus 211 -------------~~~--------~~~~~~~~~li~~~L~~dp~~R~-~~~~~~e~l~ 246 (312)
T cd05585 211 -------------RFP--------DGFDRDAKDLLIGLLSRDPTRRL-GYNGAQEIKN 246 (312)
T ss_pred -------------CCC--------CcCCHHHHHHHHHHcCCCHHHcC-CCCCHHHHHc
Confidence 000 01234578999999999999997 5 555544
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=345.79 Aligned_cols=273 Identities=21% Similarity=0.233 Sum_probs=201.3
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|++..+++.||+|... .+.+.+|++++++++||||+++++++... ...+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYN-----KFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEEC-----CeeE
Confidence 367999999999999999999999999999999753 24567899999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+|++. ++|..++..... +++.+++.++.||+.||+|||++ +||||||||+||+++.++.+||+|||+|
T Consensus 160 lv~e~~~-~~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAKRN------IAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred EEEecCC-CCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 9999994 789888876543 88999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc-----ccHHHHHH
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG-----LTIHEFAM 937 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~-----~~~~~~~~ 937 (1019)
+..... .........||+.|+|||++.+..+++++||||+||++|||++|+.||....... ........
T Consensus 230 ~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~ 303 (391)
T PHA03212 230 CFPVDI------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII 303 (391)
T ss_pred cccccc------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH
Confidence 753211 1112234579999999999999899999999999999999999998875322110 01111111
Q ss_pred HhC---CcchhhccChhhhhhh---hccCCCCCCCC-CCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KAL---PQRVIEIVDPLLLLEV---RTNNSKNPCGD-GRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~---~~~~~~~~d~~l~~~~---~~~~~~~p~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... +..+.......+...+ .......|... ......+....+.+++.+||+.||++|| |++|+++
T Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rp-ta~elL~ 375 (391)
T PHA03212 304 RRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRP-SAEALLD 375 (391)
T ss_pred HHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCC-CHHHHhc
Confidence 111 1000000000000000 00011111111 1111223456788999999999999999 9999986
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=361.92 Aligned_cols=272 Identities=24% Similarity=0.290 Sum_probs=209.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.++||+|+||.||+|++..+++.||+|+++... ....+++.+|++++++++||||+++++++.+. +.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~-----~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG-----DP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----CE
Confidence 68999999999999999999999899999999986432 23356789999999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCC-----CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQ-----HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
.++||||++||+|.+++...... ......++..++.++.||++||+|||++ ||+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998753211 1112367788899999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCCCC-----------CCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 856 VGDFGLAKFLYTCQVDDV-----------ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
|+|||+++.......... ..........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999986521110000 001112235799999999999999999999999999999999999999965
Q ss_pred CCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 925 MFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
........ ... ..++.- .....+.+..+.+++.+|++.||++||++++++.+.
T Consensus 234 ~~~~ki~~----~~~-------i~~P~~----------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~ 286 (932)
T PRK13184 234 KKGRKISY----RDV-------ILSPIE----------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQD 286 (932)
T ss_pred cchhhhhh----hhh-------ccChhh----------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 21111000 000 000000 000012245578999999999999998788999888
Q ss_pred HHHHHH
Q 001738 1005 LCAARE 1010 (1019)
Q Consensus 1005 L~~i~~ 1010 (1019)
|+...+
T Consensus 287 Le~~lq 292 (932)
T PRK13184 287 LEPHLQ 292 (932)
T ss_pred HHHHHh
Confidence 877654
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=333.45 Aligned_cols=280 Identities=21% Similarity=0.295 Sum_probs=198.6
Q ss_pred CCCCCCCceeccccEEEEEEEeC-CCCEEEEEEEeeccc--chhhHHHHHHHHHHhcC---CCCCcceEEEEEecCCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILG-EGGLLVAVKVLNLTR--KGAFKSFVAECEALRNI---RHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 777 (1019)
.+|++.+.||+|+||+||+|++. .+++.||+|+++... ......+.+|+.+++.+ +||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 37999999999999999999985 357899999987432 22234566777777665 6999999999986543333
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
....++||||++ ++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 366899999996 699999876442 2389999999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|++||.+.... ..+....
T Consensus 153 Dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~- 222 (290)
T cd07862 153 DFGLARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKIL- 222 (290)
T ss_pred cccceEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHH-
Confidence 99999765221 1223456899999999998889999999999999999999999999763221 1111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
........+........ ........+..............+.+++.+|++.||++|| |+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~-s~~~~l~ 286 (290)
T cd07862 223 DVIGLPGEEDWPRDVAL-PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI-SAYSALS 286 (290)
T ss_pred HHhCCCChhhchhhhcc-cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcC-CHHHHhc
Confidence 11000000000000000 0000000000000000012344578999999999999999 9999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=353.98 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=203.6
Q ss_pred CCCCCCceeccccEEEEEEEeCCC-CEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEG-GLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.|.+.+.||+|+||.||+|....+ ++.||+|.+..........+.+|+.+++.++||||+++++++... +..|+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-----DKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-----CEEEE
Confidence 489999999999999999998777 788999987666555556788899999999999999999999876 77899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++|+|.++++.... ...++++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 143 v~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 9999999999998865321 123488999999999999999999999 99999999999999999999999999998
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.........
T Consensus 218 ~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~ 287 (478)
T PTZ00267 218 QYSDSV-----SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGK 287 (478)
T ss_pred ecCCcc-----ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC
Confidence 653221 11123345799999999999998999999999999999999999999964211 11111111000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.++ .| ..+...+.+++.+||+.||++|| ++++++.
T Consensus 288 ----~~~------------~~--------~~~s~~~~~li~~~L~~dP~~Rp-s~~~~l~ 322 (478)
T PTZ00267 288 ----YDP------------FP--------CPVSSGMKALLDPLLSKNPALRP-TTQQLLH 322 (478)
T ss_pred ----CCC------------CC--------ccCCHHHHHHHHHHhccChhhCc-CHHHHHh
Confidence 000 00 01234578999999999999999 9999875
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=331.88 Aligned_cols=270 Identities=29% Similarity=0.442 Sum_probs=212.4
Q ss_pred CCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
++|.+.+.||+|+||.||+|++. .++..+++|.++.......+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----- 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC-----
Confidence 46888999999999999999853 34567999998766555567789999999999999999999998765
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
+..++||||+++++|.+++...... .....+++..++.++.||+.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 6689999999999999999764321 1122489999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFN 927 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~ 927 (1019)
+.++.++|+|||++....... .........++..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred ccCCcEEECCCCcccccCCCc-----eeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999997543221 1111223456788999999998899999999999999999998 9999865321
Q ss_pred CcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
. ...+.... ..... . ...++..+.+++.+||+.+|++|| |+++|++.|++
T Consensus 232 ~--~~~~~~~~---~~~~~-------------------~-----~~~~~~~~~~li~~~l~~~P~~Rp-t~~~v~~~l~~ 281 (291)
T cd05094 232 T--EVIECITQ---GRVLE-------------------R-----PRVCPKEVYDIMLGCWQREPQQRL-NIKEIYKILHA 281 (291)
T ss_pred H--HHHHHHhC---CCCCC-------------------C-----CccCCHHHHHHHHHHcccChhhCc-CHHHHHHHHHH
Confidence 1 11111100 00000 0 011245688999999999999999 99999999999
Q ss_pred HHHhhhhhh
Q 001738 1008 AREAFLSVY 1016 (1019)
Q Consensus 1008 i~~~~~~~~ 1016 (1019)
+......++
T Consensus 282 ~~~~~~~~~ 290 (291)
T cd05094 282 LGKATPIYL 290 (291)
T ss_pred HHhhcCccc
Confidence 988766554
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=327.10 Aligned_cols=262 Identities=22% Similarity=0.298 Sum_probs=208.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||||.++.. .......+.+|++++++++||||+++++++... +.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 5799999999999999999999889999999987642 233345688999999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++|+||+++++|.+++...... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999988653321 22378999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
.+....... .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||................
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~-- 222 (267)
T cd08228 152 LGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQ-- 222 (267)
T ss_pred cceeccchh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhc--
Confidence 988653211 11123467889999999988889999999999999999999999986432211111111100
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
.. .+ ..........+.+++.+||+.+|++|| ++++|++.++.++
T Consensus 223 -~~-----~~------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp-~~~~vl~~~~~~~ 266 (267)
T cd08228 223 -CD-----YP------------------PLPTEHYSEKLRELVSMCIYPDPDQRP-DIGYVHQIAKQMH 266 (267)
T ss_pred -CC-----CC------------------CCChhhcCHHHHHHHHHHCCCCcccCc-CHHHHHHHHHHhc
Confidence 00 00 001122345689999999999999999 9999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=306.42 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=202.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+.|++.+.||+|.|+.||++.+..+|+.+|+|++... .....+++.+|+.|.+.++||||+++.+.+.+. .+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~-----~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----SF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc-----ce
Confidence 45788899999999999999999999999999998632 233568899999999999999999999988766 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC---CCCeEEe
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH---DMVAHVG 857 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~ 857 (1019)
.|+|+|+|+|++|..-+-... .+++..+-.+.+||+++|.|.|.+ +|||||+||+|+++.. .--+||+
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred eEEEEecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeec
Confidence 899999999999976554432 278889999999999999999999 9999999999999953 3369999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
|||+|..+. ......+.+|||+|||||++...+|+..+|||+.|||+|-++.|.+||.+.. ...+.+.++
T Consensus 156 ~FGvAi~l~--------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~ 225 (355)
T KOG0033|consen 156 DFGLAIEVN--------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIK 225 (355)
T ss_pred ccceEEEeC--------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHh
Confidence 999998764 2344567899999999999999999999999999999999999999997521 112222211
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
+. -.++ ++..+. ...++..+++++|+..||++|. |+.|.+..
T Consensus 226 ~g----~yd~-~~~~w~-------------------~is~~Ak~LvrrML~~dP~kRI-ta~EAL~H 267 (355)
T KOG0033|consen 226 AG----AYDY-PSPEWD-------------------TVTPEAKSLIRRMLTVNPKKRI-TADEALKH 267 (355)
T ss_pred cc----ccCC-CCcccC-------------------cCCHHHHHHHHHHhccChhhhc-cHHHHhCC
Confidence 10 0111 111111 1133457899999999999999 99998764
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=314.94 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=209.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
-|.++.+||+|+||.||+|.++.+|+.+|||.+..+.+ .+++.+|+.+|++++.|++|++||.|... ...|+|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD--LQEIIKEISIMQQC~S~yVVKYYGSYFK~-----sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD--LQEIIKEISIMQQCKSKYVVKYYGSYFKH-----SDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch--HHHHHHHHHHHHHcCCchhhhhhhhhccC-----CceEee
Confidence 47778899999999999999999999999999876644 47889999999999999999999988776 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
||||..|+..+.++..+ .++++.++..+++..++||+|||.. .-+|||||+.|||++.+|++||+|||.|..
T Consensus 107 MEYCGAGSiSDI~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARR-----KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred hhhcCCCcHHHHHHHhc-----CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence 99999999999998754 3499999999999999999999999 899999999999999999999999999976
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
+.. +-.....+.||+.|||||++..-.|+.++||||+|++..||..|++||.+...- +.
T Consensus 179 LTD-------TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM--------------RA 237 (502)
T KOG0574|consen 179 LTD-------TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM--------------RA 237 (502)
T ss_pred hhh-------hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc--------------ce
Confidence 533 223344578999999999999989999999999999999999999999763221 10
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.-++.- .|. +-....++....+-+++..|+-+.|++|- |+-++++.
T Consensus 238 IFMIPT------------~PP-PTF~KPE~WS~~F~DFi~~CLiK~PE~R~-TA~~L~~H 283 (502)
T KOG0574|consen 238 IFMIPT------------KPP-PTFKKPEEWSSEFNDFIRSCLIKKPEERK-TALRLCEH 283 (502)
T ss_pred eEeccC------------CCC-CCCCChHhhhhHHHHHHHHHhcCCHHHHH-HHHHHhhh
Confidence 111110 010 11122356677899999999999999999 99988764
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=335.88 Aligned_cols=243 Identities=24% Similarity=0.299 Sum_probs=194.3
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||.||+|++..+|+.||+|+++.. .......+.+|++++++++||||+++++++... +..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~-----~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----DRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC-----CEEEEEEe
Confidence 4699999999999999989999999999753 233445678899999999999999999998876 67899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++|+|..++..... +++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRERV------FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 9999999998876543 89999999999999999999999 99999999999999999999999999987431
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhh
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIE 946 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1019)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +..........
T Consensus 147 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~-- 212 (323)
T cd05595 147 SD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELILMEEI-- 212 (323)
T ss_pred CC-------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCC--
Confidence 11 11223457899999999999989999999999999999999999999653211 11111100000
Q ss_pred ccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchh----HhHHHHHH
Q 001738 947 IVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT----LEMRNVVA 1003 (1019)
Q Consensus 947 ~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP----~s~~evl~ 1003 (1019)
..| ......+.+++.+||+.||++|| .++.++++
T Consensus 213 ---------------~~p--------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 213 ---------------RFP--------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ---------------CCC--------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 000 01234568999999999999996 26777765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=333.88 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=216.1
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
...+.++.++||-|.||.||.|.|++-.-.||||.++. +....++|..|+.+|+.++|||+|+++|+|... .-+
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E-----pPF 338 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE-----PPF 338 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccC-----CCe
Confidence 34567788999999999999999998889999999974 345568999999999999999999999999887 457
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|||+|||.+|+|.+|+++.... .++.-..+.++.||+.|++||..+ ++|||||..+|.|+.++..||++|||+
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred EEEEecccCccHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccch
Confidence 9999999999999999987643 277778899999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++++..+.+. ...+..-...|.|||-+....++.|+|||+|||++||+.| |..||.+....
T Consensus 412 sRlMtgDTYT------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS------------ 473 (1157)
T KOG4278|consen 412 SRLMTGDTYT------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------ 473 (1157)
T ss_pred hhhhcCCcee------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH------------
Confidence 9988544332 2223344788999999999999999999999999999999 88999764221
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
++.+++.. .| +.++.+.|+.+++++|+.||+++|.+|| ++.|+-+.++.+
T Consensus 474 --qVY~LLEk----gy-----------RM~~PeGCPpkVYeLMraCW~WsPsDRP-sFaeiHqafEtm 523 (1157)
T KOG4278|consen 474 --QVYGLLEK----GY-----------RMDGPEGCPPKVYELMRACWNWSPSDRP-SFAEIHQAFETM 523 (1157)
T ss_pred --HHHHHHhc----cc-----------cccCCCCCCHHHHHHHHHHhcCCcccCc-cHHHHHHHHHHH
Confidence 12222222 22 1223356888999999999999999999 999999998765
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=329.83 Aligned_cols=261 Identities=26% Similarity=0.466 Sum_probs=205.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCC-----EEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGG-----LLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
++|++.+.||+|+||.||+|.+...+ ..||+|.++... ......+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE---- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC----
Confidence 47889999999999999999876444 789999987443 33456789999999999999999999998765
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceE
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQH----------DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVL 847 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 847 (1019)
...+++|||+++++|.+++....... ....+++..++.++.|++.||+|||++ +++||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 81 -QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 56899999999999999997653211 113488999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCC
Q 001738 848 LDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMF 926 (1019)
Q Consensus 848 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~ 926 (1019)
++.++.+||+|||++....... .........+++.|+|||.+.+..++.++|||||||++|||++ |..||.+..
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSAD-----YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred EcCCCcEEECCCcceeeccccc-----cccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999997653221 1111223456788999999988899999999999999999998 999987532
Q ss_pred CCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 927 NDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.. ...+.... .... .....++.++.+++.+||+.||++|| +++||++.|+
T Consensus 232 ~~--~~~~~i~~---~~~~------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp-~~~~i~~~l~ 281 (283)
T cd05048 232 NQ--EVIEMIRS---RQLL------------------------PCPEDCPARVYALMIECWNEIPARRP-RFKDIHTRLR 281 (283)
T ss_pred HH--HHHHHHHc---CCcC------------------------CCcccCCHHHHHHHHHHccCChhhCc-CHHHHHHHHh
Confidence 21 11111110 0000 00122356789999999999999999 9999999987
Q ss_pred H
Q 001738 1007 A 1007 (1019)
Q Consensus 1007 ~ 1007 (1019)
+
T Consensus 282 ~ 282 (283)
T cd05048 282 S 282 (283)
T ss_pred c
Confidence 5
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=338.92 Aligned_cols=245 Identities=23% Similarity=0.341 Sum_probs=204.0
Q ss_pred ceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccC
Q 001738 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQN 790 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~ 790 (1019)
+||+|.||+||.|++.++...+|||.+...+....+-+..|+...++++|.|||+++|.+... ++.-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen-----Gf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN-----GFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC-----CeEEEEeecCCC
Confidence 799999999999999999999999999877777778899999999999999999999998766 678899999999
Q ss_pred CCHHHHHhccCCCCCccCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC-CCCCeEEeeeccceeccc
Q 001738 791 GSLEEWLHHSNDQHDVCDL--SLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYT 867 (1019)
Q Consensus 791 gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfg~a~~~~~ 867 (1019)
|+|.+.++..-. ++ .+..+-.+.+||++||.|||++ .|||||||-+||+++ -.|.+||+|||-++.+..
T Consensus 657 GSLSsLLrskWG-----PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 657 GSLSSLLRSKWG-----PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CcHHHHHHhccC-----CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 999999987653 24 6778888999999999999999 999999999999996 578999999999986522
Q ss_pred cCCCCCCCCCcccccccCCcccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 868 CQVDDVETPSSSIGIKGTVGYVAPEYGMGS--EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 868 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
....+..+.||..|||||++..+ .|++++|||||||++.||.||++||.........+...-+ .
T Consensus 729 -------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGm-------y 794 (1226)
T KOG4279|consen 729 -------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGM-------Y 794 (1226)
T ss_pred -------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcc-------e
Confidence 33445568899999999999876 4899999999999999999999999765443222211111 1
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..- ++-.++...+...++.+|+.+||.+|| +++++++
T Consensus 795 KvH--------------------P~iPeelsaeak~FilrcFepd~~~R~-sA~~LL~ 831 (1226)
T KOG4279|consen 795 KVH--------------------PPIPEELSAEAKNFILRCFEPDPCDRP-SAKDLLQ 831 (1226)
T ss_pred ecC--------------------CCCcHHHHHHHHHHHHHHcCCCcccCc-cHHHhcc
Confidence 110 111244566778999999999999999 9999975
|
|
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=337.39 Aligned_cols=266 Identities=24% Similarity=0.352 Sum_probs=204.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 776 (1019)
++|++.+.||+|+||.||+|.+.. +++.||+|+++... ....+.+.+|+.+++++ +|+||+++++++...+
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-- 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-- 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC--
Confidence 479999999999999999997532 35789999987432 23345678899999999 7999999999886542
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCC----------------------------------------------------
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQH---------------------------------------------------- 804 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~---------------------------------------------------- 804 (1019)
...++||||+++++|.+++.......
T Consensus 85 --~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 85 --GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred --CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 46789999999999999986532100
Q ss_pred ---CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccc
Q 001738 805 ---DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881 (1019)
Q Consensus 805 ---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~ 881 (1019)
....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.... .......
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~-----~~~~~~~ 234 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-----DYVRKGD 234 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCc-----chhhccC
Confidence 012589999999999999999999999 99999999999999999999999999998653221 1111223
Q ss_pred cccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccC
Q 001738 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNN 960 (1019)
Q Consensus 882 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 960 (1019)
..++..|+|||++.+..++.++||||+||++|||++ |..||......+ ........ .....
T Consensus 235 ~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~----~~~~~------------- 296 (337)
T cd05054 235 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKE----GTRMR------------- 296 (337)
T ss_pred CCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhc----cCCCC-------------
Confidence 456778999999999999999999999999999998 999996532211 11111100 00000
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 961 SKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 961 ~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
.| .....++.+++.+||+.+|++|| +++|+++.|+.+.+
T Consensus 297 --~~--------~~~~~~~~~l~~~cl~~~p~~RP-s~~ell~~l~~~~~ 335 (337)
T cd05054 297 --AP--------EYATPEIYSIMLDCWHNNPEDRP-TFSELVEILGDLLQ 335 (337)
T ss_pred --CC--------ccCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHHHh
Confidence 00 11234678999999999999999 99999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=335.48 Aligned_cols=260 Identities=25% Similarity=0.397 Sum_probs=203.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE----EEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL----LVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|++.+.||+|+||.||+|++..+++ .||+|+++... ....+++.+|+.+++.++||||+++++++...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 479999999999999999999865554 48999987443 34456788999999999999999999998753
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
..++|+||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 35799999999999999987542 278999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||+++...... .........++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... .......
T Consensus 153 fG~a~~~~~~~-----~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~ 225 (316)
T cd05108 153 FGLAKLLGADE-----KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE 225 (316)
T ss_pred ccccccccCCC-----cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHh
Confidence 99998653221 1111112334678999999999899999999999999999998 99998653111 1111110
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhh
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAF 1012 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~ 1012 (1019)
.. ...|.. ..+...+.+++.+||+.+|.+|| ++.+++..+.++....
T Consensus 226 ~~---------------------~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp-s~~~l~~~l~~~~~~~ 272 (316)
T cd05108 226 KG---------------------ERLPQP------PICTIDVYMIMVKCWMIDADSRP-KFRELIIEFSKMARDP 272 (316)
T ss_pred CC---------------------CCCCCC------CCCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHHHcCC
Confidence 00 000000 01234578999999999999999 9999999998886544
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=336.55 Aligned_cols=244 Identities=24% Similarity=0.302 Sum_probs=195.9
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||.||+|++..+++.||+|++... .......+.+|+++++.++||||+++++++... +..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK-----DRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC-----CEEEEEEe
Confidence 4699999999999999989999999999743 233456778999999999999999999998876 67899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++|+|.+++..... +++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRERV------FSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 9999999999876543 89999999999999999999999 99999999999999999999999999987531
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhh
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIE 946 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1019)
. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 147 ~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~~~-- 212 (328)
T cd05593 147 T-------DAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEDI-- 212 (328)
T ss_pred C-------cccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccCCc--
Confidence 1 11122345789999999999988999999999999999999999999965211 111111110000
Q ss_pred ccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchh----HhHHHHHHH
Q 001738 947 IVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT----LEMRNVVAK 1004 (1019)
Q Consensus 947 ~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP----~s~~evl~~ 1004 (1019)
. .| ......+.+++.+||+.||++|| ++++|+++.
T Consensus 213 ----~-----------~p--------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 ----K-----------FP--------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ----c-----------CC--------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0 00 01134578899999999999995 278888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=329.70 Aligned_cols=261 Identities=30% Similarity=0.477 Sum_probs=205.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 776 (1019)
.++|.+.+.||+|+||.||+|++.. +++.||+|+++..... ..+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC---
Confidence 3568899999999999999998742 3578999999755443 457899999999999999999999998876
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCC--------CCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSND--------QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
...++||||+++++|.+++..... ......+++..+..++.|++.|++|||++ +++||||||+||++
T Consensus 81 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 81 --DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred --CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 678999999999999999986542 11223488999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFN 927 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~ 927 (1019)
+.++.+||+|||.++....... ........+++.|+|||++.+..+++++|||||||++|||++ |..||.....
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~ 230 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN 230 (280)
T ss_pred cCCCeEEECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999976432221 111122345788999999999999999999999999999998 9999865322
Q ss_pred CcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
. ...+.... ... .. + .......+.+++.+||+.||++|| +++||++.|+
T Consensus 231 ~--~~~~~~~~---~~~-~~----------------~-------~~~~~~~~~~li~~~l~~~p~~Rp-~~~eil~~l~ 279 (280)
T cd05049 231 E--EVIECITQ---GRL-LQ----------------R-------PRTCPSEVYDIMLGCWKRDPQQRI-NIKDIHERLQ 279 (280)
T ss_pred H--HHHHHHHc---CCc-CC----------------C-------CCCCCHHHHHHHHHHcCCCcccCC-CHHHHHHHhh
Confidence 1 11111110 000 00 0 011245678999999999999999 9999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=339.01 Aligned_cols=197 Identities=28% Similarity=0.366 Sum_probs=173.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC-C-----CCcceEEEEEecCCCCCc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-H-----RNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 778 (1019)
+|++.++||+|+||.|.+|.+..+++.||||+++.. +....+...|+.+|..++ | -|+|+++++|...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr----- 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR----- 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc-----
Confidence 899999999999999999999999999999999844 334456678999999996 3 4799999999877
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC--CCeEE
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD--MVAHV 856 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kL 856 (1019)
++.|||+|.+ ..+|+++++.+.. .+++...++.++.||+.||.+||+. +|||+||||+|||+..- ..+||
T Consensus 261 ~HlciVfELL-~~NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 8899999988 5699999998874 3499999999999999999999999 99999999999999653 47999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
+|||.|++... ....+.-+..|+|||++.|.+|+.+.||||||||++||++|.+-|.+.
T Consensus 333 IDFGSSc~~~q----------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 333 IDFGSSCFESQ----------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EecccccccCC----------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 99999987522 222456789999999999999999999999999999999998888763
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=325.10 Aligned_cols=256 Identities=26% Similarity=0.442 Sum_probs=204.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|++.+.||+|+||.||+|.+..+++.||+|+++.. ....+.+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----CCcEE
Confidence 4688889999999999999999888999999998744 33346788999999999999999999998765 56799
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... ..+++..++.++.|+++||+|||++ +++||||||+||++++++.+||+|||.+.
T Consensus 80 v~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999999999976432 2389999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......++..|+|||...+..++.++|||||||++|||++ |..||..... ...........
T Consensus 153 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~-- 222 (263)
T cd05052 153 LMTGDTY------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKGY-- 222 (263)
T ss_pred cccccee------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCC--
Confidence 6532211 11112234678999999998899999999999999999998 8999865311 11111110000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.+ ..| ..++..+.+++.+||+.+|++|| |++|+++.|+.+
T Consensus 223 ------~~-----------~~~--------~~~~~~~~~li~~cl~~~p~~Rp-~~~~l~~~l~~~ 262 (263)
T cd05052 223 ------RM-----------ERP--------EGCPPKVYELMRACWQWNPSDRP-SFAEIHQAFETM 262 (263)
T ss_pred ------CC-----------CCC--------CCCCHHHHHHHHHHccCCcccCC-CHHHHHHHHHhh
Confidence 00 000 11245688999999999999999 999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=344.52 Aligned_cols=259 Identities=22% Similarity=0.277 Sum_probs=200.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++.+. ++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-----~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE-----NY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC-----Ce
Confidence 47899999999999999999999899999999997532 23445678899999999999999999999876 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKDT------FTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 8999999999999999976543 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCC-------------------------------CCCcccccccCCcccCcccccCCCCCCcchHHHHH
Q 001738 861 LAKFLYTCQVDDVE-------------------------------TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFG 909 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG 909 (1019)
++..+......... ........+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 98764321100000 00011234699999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCC
Q 001738 910 ILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSME 989 (1019)
Q Consensus 910 vil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~ 989 (1019)
|++|||++|..||..... .+......... ..+ ..|.. ......+.+++.+|+.
T Consensus 227 ~il~el~~G~~Pf~~~~~-----~~~~~~i~~~~------~~~---------~~~~~------~~~s~~~~~li~~ll~- 279 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNP-----QETYRKIINWK------ETL---------QFPDE------VPLSPEAKDLIKRLCC- 279 (364)
T ss_pred hHHHHhhcCCCCCCCCCH-----HHHHHHHHcCC------Ccc---------CCCCC------CCCCHHHHHHHHHHcc-
Confidence 999999999999975321 11111110000 000 00000 0113346788888986
Q ss_pred CcCchhHh---HHHHHHH
Q 001738 990 SPIDRTLE---MRNVVAK 1004 (1019)
Q Consensus 990 dP~~RP~s---~~evl~~ 1004 (1019)
+|.+|+ + ++|+++.
T Consensus 280 ~p~~R~-~~~~~~~ll~h 296 (364)
T cd05599 280 EAERRL-GNNGVNEIKSH 296 (364)
T ss_pred CHhhcC-CCCCHHHHhcC
Confidence 999999 7 8888763
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=342.12 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=193.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++|+||+++++++... ...+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN-----GEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC-----CeEE
Confidence 457778999999999999999998999999999865433 3356788999999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+.. ..++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986421 156778889999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-----SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
+...... .......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+.....
T Consensus 216 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~ 286 (353)
T PLN00034 216 RILAQTM-------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMC 286 (353)
T ss_pred eeccccc-------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHH
Confidence 8653211 11223578999999998743 23457899999999999999999999732111 1111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...... .+ .....+..++.+++.+||+.||++|| |++|+++.
T Consensus 287 ~~~~~~-------------------~~-----~~~~~~~~~l~~li~~~l~~~P~~Rp-t~~ell~h 328 (353)
T PLN00034 287 AICMSQ-------------------PP-----EAPATASREFRHFISCCLQREPAKRW-SAMQLLQH 328 (353)
T ss_pred HHhccC-------------------CC-----CCCCccCHHHHHHHHHHccCChhhCc-CHHHHhcC
Confidence 100000 00 00012245689999999999999999 99999874
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=301.90 Aligned_cols=258 Identities=24% Similarity=0.321 Sum_probs=208.3
Q ss_pred HHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--------hhhHHHHHHHHHHhcC-CCCCcceEEE
Q 001738 698 ELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--------GAFKSFVAECEALRNI-RHRNLIKIIT 768 (1019)
Q Consensus 698 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~~ 768 (1019)
.-+.....|.-.+.+|+|..++|.++.++.+|+.+|+|++..... ...+...+|+.+++++ .||+|+++.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 334556788889999999999999999999999999999964321 1245567899999998 6999999999
Q ss_pred EEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 769 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
+|++. .+.++|+|.|+.|.|.+++.+.-. +++++.++|++|+..|++|||.+ .|||||+||+|||+
T Consensus 91 ~yes~-----sF~FlVFdl~prGELFDyLts~Vt------lSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILl 156 (411)
T KOG0599|consen 91 VYESD-----AFVFLVFDLMPRGELFDYLTSKVT------LSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILL 156 (411)
T ss_pred eccCc-----chhhhhhhhcccchHHHHhhhhee------ecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheee
Confidence 99887 789999999999999999987654 99999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC------CCCCCcchHHHHHHHHHHHHhCCCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG------SEASMAGDVYSFGILLLEMFIRKRPT 922 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlGvil~ell~g~~Pf 922 (1019)
+++.++||+|||+|+.+. ........+|||+|.|||.+.- ..|+...|+||.|||+|.++.|.+||
T Consensus 157 ddn~~i~isDFGFa~~l~--------~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF 228 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLE--------PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF 228 (411)
T ss_pred ccccceEEeccceeeccC--------CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch
Confidence 999999999999998763 3344556799999999998652 35888999999999999999999999
Q ss_pred CCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 923 DSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
... ...-+...++ .+.|. . ..++..+......+++.+|++.||.+|. |++|++
T Consensus 229 wHR--kQmlMLR~Im---------------eGkyq---F------~speWadis~~~KdLIsrlLqVdp~~Ri-take~L 281 (411)
T KOG0599|consen 229 WHR--KQMLMLRMIM---------------EGKYQ---F------RSPEWADISATVKDLISRLLQVDPTKRI-TAKEAL 281 (411)
T ss_pred hHH--HHHHHHHHHH---------------hcccc---c------CCcchhhccccHHHHHHHHHeeCchhcc-cHHHHh
Confidence 531 1111111111 11110 0 1112233455679999999999999999 999998
Q ss_pred HH
Q 001738 1003 AK 1004 (1019)
Q Consensus 1003 ~~ 1004 (1019)
+.
T Consensus 282 aH 283 (411)
T KOG0599|consen 282 AH 283 (411)
T ss_pred cC
Confidence 74
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=330.41 Aligned_cols=265 Identities=25% Similarity=0.381 Sum_probs=215.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.....+.++||+|.||+|.++... .+..||||+++..+ +..+.+|.+|+++|.+++||||++++|+|... +-+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D-----ePi 610 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD-----DPL 610 (807)
T ss_pred hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC-----Cch
Confidence 345778899999999999999985 46999999998664 44568999999999999999999999999987 557
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++|+|||++|+|.+|+..+.... ........|+.||+.|++||.+. ++||||+.++|+|++.++++||+|||+
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt----~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPT----AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcc----cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccc
Confidence 99999999999999999875422 45556677999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCCCCcccHHHHHHHh
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI--RKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~--g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
++-++..++... ....+-+.+|||||.+.-++++.++|||+||+++||+++ ...||....+ +...+.+...
T Consensus 684 sR~lysg~yy~v-----qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~--e~vven~~~~ 756 (807)
T KOG1094|consen 684 SRNLYSGDYYRV-----QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD--EQVVENAGEF 756 (807)
T ss_pred ccccccCCceee-----ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH--HHHHHhhhhh
Confidence 997765553322 233455789999999999999999999999999999876 7889876533 2334444443
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.+.+-...+-+ ....|+.++++++.+||+.|.++|| +++++...|.+.
T Consensus 757 ~~~~~~~~~l~--------------------~P~~cp~~lyelml~Cw~~es~~RP-sFe~lh~~lq~~ 804 (807)
T KOG1094|consen 757 FRDQGRQVVLS--------------------RPPACPQGLYELMLRCWRRESEQRP-SFEQLHLFLQED 804 (807)
T ss_pred cCCCCcceecc--------------------CCCcCcHHHHHHHHHHhchhhhcCC-CHHHHHHHHHHh
Confidence 33332222221 1134678899999999999999999 999999988764
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=342.20 Aligned_cols=266 Identities=24% Similarity=0.337 Sum_probs=205.7
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeeccc-chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTR-KGAFKSFVAECEALRNIR-HRNLIKIITICSSID 774 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 774 (1019)
..++|.+.++||+|+||.||+|++.. .+..||||+++... ....+.+.+|+++++++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~- 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS- 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC-
Confidence 35689999999999999999998642 24579999997543 333567899999999996 99999999999765
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCC---------------------------------------------------
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQ--------------------------------------------------- 803 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 803 (1019)
...|+||||+++|+|.+++......
T Consensus 114 ----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 114 ----GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ----CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 6789999999999999998753210
Q ss_pred ---------------------------------------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCC
Q 001738 804 ---------------------------------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPS 844 (1019)
Q Consensus 804 ---------------------------------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 844 (1019)
.....+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChH
Confidence 0012478889999999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCC
Q 001738 845 NVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTD 923 (1019)
Q Consensus 845 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~ 923 (1019)
||+++.++.+||+|||+++...... .........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDS-----NYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccc-----cccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence 9999999999999999998653221 1111223456788999999998899999999999999999997 999987
Q ss_pred CCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 924 SMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
....+.. ...... ... . +. ....+...+.+++.+||+.||++|| ++.+|.+
T Consensus 342 ~~~~~~~-~~~~~~----~~~----~--------------~~-----~~~~~~~~l~~li~~cl~~dP~~RP-t~~~l~~ 392 (400)
T cd05105 342 GMIVDST-FYNKIK----SGY----R--------------MA-----KPDHATQEVYDIMVKCWNSEPEKRP-SFLHLSD 392 (400)
T ss_pred ccchhHH-HHHHHh----cCC----C--------------CC-----CCccCCHHHHHHHHHHCccCHhHCc-CHHHHHH
Confidence 5322111 110000 000 0 00 0012345688999999999999999 9999999
Q ss_pred HHHHHH
Q 001738 1004 KLCAAR 1009 (1019)
Q Consensus 1004 ~L~~i~ 1009 (1019)
.|+++.
T Consensus 393 ~l~~l~ 398 (400)
T cd05105 393 IVESLL 398 (400)
T ss_pred HHHHHc
Confidence 998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=315.20 Aligned_cols=259 Identities=26% Similarity=0.298 Sum_probs=206.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..|++.+.||.|.-|+||+++.+.++..+|+|++.+.. .....+...|-+||+.+.||.++.+|+.+++. .+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~-----~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD-----KY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc-----ce
Confidence 35677889999999999999999889999999997543 34456678899999999999999999999987 88
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+|||||+||+|....+.+..+ .+++..++.++.+++-||+|||.. |||+|||||+||||.++|++.|+||.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~----~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGK----RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCC----ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 99999999999999998877653 399999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccC------------------------------CC-C------------------CCCCCcccccccCCcccCc
Q 001738 861 LAKFLYTCQ------------------------------VD-D------------------VETPSSSIGIKGTVGYVAP 891 (1019)
Q Consensus 861 ~a~~~~~~~------------------------------~~-~------------------~~~~~~~~~~~gt~~y~aP 891 (1019)
++....... .. . ......+..++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 885331100 00 0 0111233457899999999
Q ss_pred ccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCcc
Q 001738 892 EYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGG 971 (1019)
Q Consensus 892 E~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~ 971 (1019)
|++.|..-+.++|.|+|||++|||+.|..||.+...+ ..+...+.+ .+. .|.
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv~~------------~l~---------Fp~------ 356 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIVGQ------------PLK---------FPE------ 356 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHhcC------------CCc---------CCC------
Confidence 9999999999999999999999999999999875432 222221111 110 000
Q ss_pred HHHHHHHHHHHHhhccCCCcCchhHh----HHHHHH
Q 001738 972 IEECLVAVITIGVLCSMESPIDRTLE----MRNVVA 1003 (1019)
Q Consensus 972 ~~~~~~~l~~l~~~Cl~~dP~~RP~s----~~evl~ 1003 (1019)
..+......++|++.+.+||.+|- - ++||-+
T Consensus 357 ~~~vs~~akDLIr~LLvKdP~kRl-g~~rGA~eIK~ 391 (459)
T KOG0610|consen 357 EPEVSSAAKDLIRKLLVKDPSKRL-GSKRGAAEIKR 391 (459)
T ss_pred CCcchhHHHHHHHHHhccChhhhh-ccccchHHhhc
Confidence 012245578999999999999999 6 666643
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=343.36 Aligned_cols=206 Identities=24% Similarity=0.330 Sum_probs=175.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~-----~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK-----DNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC-----CEE
Confidence 6889999999999999999999999999999997532 33456788999999999999999999999876 679
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|+||||+++|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~------~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRMEV------FPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 999999999999999976543 88999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCC----------------------------------------CCCCCcccccccCCcccCcccccCCCCCC
Q 001738 862 AKFLYTCQVDD----------------------------------------VETPSSSIGIKGTVGYVAPEYGMGSEASM 901 (1019)
Q Consensus 862 a~~~~~~~~~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 901 (1019)
++......... ...........||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 86431100000 00000112357999999999999889999
Q ss_pred cchHHHHHHHHHHHHhCCCCCCC
Q 001738 902 AGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 902 ~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
++||||+||++|||++|+.||..
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~ 250 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLA 250 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcC
Confidence 99999999999999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=323.85 Aligned_cols=265 Identities=27% Similarity=0.438 Sum_probs=204.3
Q ss_pred CCCCCceeccccEEEEEEEeCCC---CEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC-CCcc
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEG---GLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDS-HGVD 779 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 779 (1019)
|++.+.||+|+||.||+|....+ +..||+|.++... ......+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 57889999999999999987643 3789999987542 2334678999999999999999999998876543 2224
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++...........+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5799999999999999986654322334589999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.++........ .......++..|+|||...+..++.++|||||||++|||++ |..||.+... ....+....
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYLRH 230 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc
Confidence 999865332211 11112234678999999988889999999999999999999 8888865321 111111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.... ..| ..+...+.+++.+||+.||++|| |+.|+++.|+++
T Consensus 231 ---~~~~----------------~~~--------~~~~~~~~~li~~~l~~~p~~Rp-~~~e~~~~l~~~ 272 (273)
T cd05035 231 ---GNRL----------------KQP--------EDCLDELYDLMYSCWRADPKDRP-TFTKLREVLENI 272 (273)
T ss_pred ---CCCC----------------CCC--------cCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHhh
Confidence 0000 000 12345689999999999999999 999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=335.06 Aligned_cols=242 Identities=24% Similarity=0.291 Sum_probs=192.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCC-CcceEEEEEecCCCCCcce
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHR-NLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 780 (1019)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|.+++..+.|+ +|+++++++... +.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-----DR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----CE
Confidence 588899999999999999999988999999999753 233456778899999999765 578888888765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~------~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVGK------FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 8999999999999999976543 88999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++..... .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........
T Consensus 147 ~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i~--- 214 (324)
T cd05587 147 MCKENIF-------GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQSIM--- 214 (324)
T ss_pred cceecCC-------CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHH---
Confidence 9864311 11122345789999999999999999999999999999999999999975321 11111111
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
... . ..|. ....++.+++.+|++.||.+|+ +.
T Consensus 215 ~~~------~-----------~~~~--------~~~~~~~~li~~~l~~~P~~R~-~~ 246 (324)
T cd05587 215 EHN------V-----------SYPK--------SLSKEAVSICKGLLTKHPAKRL-GC 246 (324)
T ss_pred cCC------C-----------CCCC--------CCCHHHHHHHHHHhhcCHHHcC-CC
Confidence 000 0 0000 1134568999999999999999 65
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=334.82 Aligned_cols=238 Identities=25% Similarity=0.337 Sum_probs=189.2
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHH---hcCCCCCcceEEEEEecCCCCCcc
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEAL---RNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++ +.++||||+++++++... .
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~-----~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE-----D 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC-----C
Confidence 678899999999999999999899999999997432 23345566676655 566899999999999876 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..|+||||+++++|..++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTDV-------FSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 7899999999999998886532 89999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
|+++.... .........|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+.....
T Consensus 146 g~~~~~~~-------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~~~i 213 (324)
T cd05589 146 GLCKEGMG-------FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVFDSI 213 (324)
T ss_pred cCCccCCC-------CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 99864311 11222346789999999999998999999999999999999999999975321 1111110
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchh
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT 995 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 995 (1019)
.... ...| ......+.+++.+||+.||.+||
T Consensus 214 ~~~~-----------------~~~p--------~~~~~~~~~li~~~L~~dP~~R~ 244 (324)
T cd05589 214 VNDE-----------------VRYP--------RFLSREAISIMRRLLRRNPERRL 244 (324)
T ss_pred HhCC-----------------CCCC--------CCCCHHHHHHHHHHhhcCHhHcC
Confidence 0000 0000 01134568899999999999999
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=352.06 Aligned_cols=264 Identities=25% Similarity=0.323 Sum_probs=207.4
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC--
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-- 776 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 776 (1019)
...++|++.+.||+|+||+||+|++..+++.||||++... .......+.+|+.++..++|+|++++...+...+..
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3457999999999999999999999989999999998754 233456688999999999999999998877554321
Q ss_pred -CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 777 -GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 777 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
.....++||||+++|+|.++++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEE
Confidence 11347899999999999999976432 123489999999999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
|+|||+++...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.
T Consensus 184 L~DFGls~~~~~~~-----~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~ 253 (496)
T PTZ00283 184 LGDFGFSKMYAATV-----SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEV 253 (496)
T ss_pred EEecccCeeccccc-----cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHH
Confidence 99999998653221 111223457999999999999999999999999999999999999999642 12222
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
......... ++ .| ......+.+++.+||+.||.+|| +++++++.
T Consensus 254 ~~~~~~~~~----~~------------~~--------~~~~~~l~~li~~~L~~dP~~RP-s~~ell~~ 297 (496)
T PTZ00283 254 MHKTLAGRY----DP------------LP--------PSISPEMQEIVTALLSSDPKRRP-SSSKLLNM 297 (496)
T ss_pred HHHHhcCCC----CC------------CC--------CCCCHHHHHHHHHHcccChhhCc-CHHHHHhC
Confidence 221111100 00 00 11244578999999999999999 99999864
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=327.40 Aligned_cols=251 Identities=34% Similarity=0.524 Sum_probs=191.8
Q ss_pred CCCceeccccEEEEEEEeC----CCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 708 TSNMIGQGSFGFVYRGILG----EGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 708 ~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+.+.||.|.||.||+|.+. ..+..|+||+++... ....+.+.+|++.+++++||||++++|++... ...+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~-----~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN-----EPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----SSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc-----cccc
Confidence 4578999999999999987 446889999996543 33468899999999999999999999999854 4589
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++|+|.+++..... ..+++..+..|+.||++||+|||++ +++||||+++||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred cccccccccccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 99999999999999998721 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... .........+...|+|||.+.+..++.++||||||+++||+++ |+.||... ......+....
T Consensus 151 ~~~~~~~-----~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~~~--- 220 (259)
T PF07714_consen 151 RPISEKS-----KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKLKQ--- 220 (259)
T ss_dssp EETTTSS-----SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHHHT---
T ss_pred ccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccc---
Confidence 8652211 1112223456789999999988889999999999999999999 67888653 11111111111
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
...... . ..+...+.+++.+||+.||++|| |++++++.|
T Consensus 221 ~~~~~~-~-----------------------~~~~~~~~~li~~C~~~~p~~RP-s~~~i~~~L 259 (259)
T PF07714_consen 221 GQRLPI-P-----------------------DNCPKDIYSLIQQCWSHDPEKRP-SFQEILQEL 259 (259)
T ss_dssp TEETTS-B-----------------------TTSBHHHHHHHHHHT-SSGGGS---HHHHHHHH
T ss_pred ccccee-c-----------------------cchhHHHHHHHHHHcCCChhhCc-CHHHHHhcC
Confidence 110000 0 11245578999999999999999 999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=323.61 Aligned_cols=265 Identities=25% Similarity=0.406 Sum_probs=202.2
Q ss_pred CCCCCceeccccEEEEEEEeCCCCE--EEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC-CCcce
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGL--LVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDS-HGVDF 780 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 780 (1019)
|.+.+.||+|+||.||+|++..++. .||+|.++.. .....+.+.+|+++++.++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4577899999999999999876664 6999998743 34445778899999999999999999998754322 12245
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++|+|.+++...........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999886443222234589999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
+++....... ........+++.|+|||...+..++.++|||||||++|||++ |+.||..... ....+....
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~- 229 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLRQ- 229 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc-
Confidence 9986532211 011112345778999999998899999999999999999999 7889865211 111111110
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.... + . . ..+...+.+++.+||+.||++|| |++|+++.|+.+
T Consensus 230 --~~~~------------------~-~--~---~~~~~~~~~li~~~l~~~p~~Rp-s~~~l~~~l~~~ 271 (272)
T cd05075 230 --GNRL------------------K-Q--P---PDCLDGLYSLMSSCWLLNPKDRP-SFETLRCELEKA 271 (272)
T ss_pred --CCCC------------------C-C--C---CCCCHHHHHHHHHHcCCCcccCc-CHHHHHHHHHhh
Confidence 0000 0 0 0 01244578999999999999999 999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=332.30 Aligned_cols=242 Identities=26% Similarity=0.339 Sum_probs=190.0
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++... ...++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK-----EHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CEEEEEE
Confidence 46999999999999999899999999997532 23334556677777654 899999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~gg~L~~~~~~~~~------~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSSGR------FDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999999976543 89999999999999999999999 9999999999999999999999999999753
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.........
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~~-- 212 (316)
T cd05592 147 MNG-------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILNDR-- 212 (316)
T ss_pred CCC-------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCC--
Confidence 211 1222345789999999999998999999999999999999999999975321 11111110000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH-HHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR-NVVA 1003 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~-evl~ 1003 (1019)
+.+ | ......+.+++.+||+.||.+|| ++. ++.+
T Consensus 213 ----~~~-----------~--------~~~~~~~~~ll~~~l~~~P~~R~-~~~~~l~~ 247 (316)
T cd05592 213 ----PHF-----------P--------RWISKEAKDCLSKLFERDPTKRL-GVDGDIRQ 247 (316)
T ss_pred ----CCC-----------C--------CCCCHHHHHHHHHHccCCHHHcC-CChHHHHc
Confidence 000 0 01134468899999999999999 765 4543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=336.60 Aligned_cols=244 Identities=23% Similarity=0.279 Sum_probs=194.5
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||.||+|++..+++.||+|+++.. .......+.+|+++++.++||||+++++++... +..|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~-----~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-----DRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC-----CEEEEEEe
Confidence 4699999999999999989999999999753 223445678899999999999999999998876 67899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
|+++|+|.+++..... +++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRERV------FSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 9999999998876543 8999999999999999999997 7 9999999999999999999999999998753
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~i~~~~~- 213 (325)
T cd05594 147 IKD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEEI- 213 (325)
T ss_pred CCC-------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHHHhcCCC-
Confidence 211 1122235689999999999998999999999999999999999999965211 111111000000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchh----HhHHHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT----LEMRNVVAK 1004 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP----~s~~evl~~ 1004 (1019)
..|. .....+.+++.+|++.||++|+ ++++++++.
T Consensus 214 ----------------~~p~--------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 ----------------RFPR--------TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ----------------CCCC--------CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 0000 0134568899999999999995 278888754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=346.90 Aligned_cols=389 Identities=27% Similarity=0.405 Sum_probs=269.5
Q ss_pred CCCcccceeccCCCccC-CCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhhcccccccccccccccccccc
Q 001738 96 GNLSFLRLIDLADNNFY-GNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRL 174 (1019)
Q Consensus 96 ~~l~~L~~L~L~~n~~~-g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L 174 (1019)
+-|+..+-.|+++|.|+ +..|..+..++++++|.|...++. .+|+.++.|.+ |
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqk-------------------------L 57 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQK-------------------------L 57 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhh-------------------------h
Confidence 34566777888888888 458888888888888888888777 77777777654 4
Q ss_pred ceeecccccccCCCCccccCccccceeeecccccc-cCCCccccCccccceeeccccccCCCCCCcccccccccceeccC
Q 001738 175 EKLSIADNHLTGQLPASIGNLSVLKVINVEENRLS-GRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253 (1019)
Q Consensus 175 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~-~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 253 (1019)
+.|.+++|++. .+...+..|+.|+.+.+..|++. .-+|..+-.+..|++||||+|+++ ..|..+..-+++-+|+||+
T Consensus 58 EHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~ 135 (1255)
T KOG0444|consen 58 EHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSY 135 (1255)
T ss_pred hhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEccc
Confidence 55555566665 55566667777777777777775 245666777777777777777777 6777777777777777777
Q ss_pred CcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCCC
Q 001738 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGA 333 (1019)
Q Consensus 254 N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 333 (1019)
|+|. +||..++.++..|-.|+|++|++. .+|..+..+..|++|+|++|.+...--.
T Consensus 136 N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLr---------------------- 191 (1255)
T KOG0444|consen 136 NNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLR---------------------- 191 (1255)
T ss_pred Cccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHh----------------------
Confidence 7776 666666655555555555555544 3344444444455555554444322212
Q ss_pred CCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCCc
Q 001738 334 ANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIP 413 (1019)
Q Consensus 334 ~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 413 (1019)
.+..+++|..|++++.+=+ ...+|..+..+.+|..+|++.|.+. .+|
T Consensus 192 --------QLPsmtsL~vLhms~TqRT------------------------l~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 192 --------QLPSMTSLSVLHMSNTQRT------------------------LDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred --------cCccchhhhhhhcccccch------------------------hhcCCCchhhhhhhhhccccccCCC-cch
Confidence 2233444444444443221 0146777777888888888888887 788
Q ss_pred hhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhccc
Q 001738 414 HEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITT 493 (1019)
Q Consensus 414 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 493 (1019)
+.+.++.+|+.|+||+|+|+ .+.-..+...+|+.|+||.|+++ .+|++++.+++|+.|++.+|+++-
T Consensus 239 ecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F----------- 305 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF----------- 305 (1255)
T ss_pred HHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc-----------
Confidence 88888888888888888887 45555566678888888888887 788888888888888888888761
Q ss_pred cccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccc
Q 001738 494 LSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLS 573 (1019)
Q Consensus 494 ~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 573 (1019)
+-+|..++.+.+|+.+..++|.+. .+|+.++.|.+|+.|.|+.|++- .+|+++.-++.|+.|||.
T Consensus 306 -------------eGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlr 370 (1255)
T KOG0444|consen 306 -------------EGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLR 370 (1255)
T ss_pred -------------cCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeecc
Confidence 125778888888899999999887 88888999999999999999887 788888888889999998
Q ss_pred cCcCCCCchhhhcccCccceEEcc
Q 001738 574 SNNLSGQIPKYLENLSFLEYLNIS 597 (1019)
Q Consensus 574 ~N~l~~~~p~~l~~l~~L~~L~l~ 597 (1019)
.|.---..|.--..-++|++-++.
T Consensus 371 eNpnLVMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 371 ENPNLVMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred CCcCccCCCCcchhhhcceeeecc
Confidence 886542333322222455555544
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=329.29 Aligned_cols=272 Identities=28% Similarity=0.358 Sum_probs=204.0
Q ss_pred CC-CCCCceeccccEEEEEEEe----CCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 705 EF-STSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 705 ~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
+| ++.+.||+|+||+||++.. ..+++.||+|+++.... ...+.+.+|++++++++||||+++++++.....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 80 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG--- 80 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC---
Confidence 44 8899999999999987653 34678999999975432 345678899999999999999999998865432
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++||||+++++|.+++.... +++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~~-------l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~d 150 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGD 150 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEee
Confidence 46799999999999999997643 89999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||+++....... .........++..|+|||...+..++.++||||||+++|||++|..||................
T Consensus 151 fg~~~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 151 FGLAKAVPEGHE----YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred cccccccCCcch----hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 999986532211 0011112345677999999988889999999999999999999999986532211111100000
Q ss_pred hC-CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 939 AL-PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 939 ~~-~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
.. .....+..+.. ...|+. ..+..++.+++.+||+.+|++|| |++++++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~---------~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp-s~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLERG---------MRLPCP------KNCPQEVYILMKNCWETEAKFRP-TFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhhcC---------CCCCCC------CCCCHHHHHHHHHHhccChhhCC-CHHHHHHHHHHhh
Confidence 00 00011111100 011111 12345789999999999999999 9999999998874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=333.34 Aligned_cols=237 Identities=27% Similarity=0.323 Sum_probs=190.2
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|+++.+++.||+|+++.. .....+.+..|..++... +||||+++++++... +..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~-----~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP-----DRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC-----CEEEEEE
Confidence 4699999999999999989999999999743 233445677888888876 699999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~~~------l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKSRR------FDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999999876543 89999999999999999999999 9999999999999999999999999998753
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~~- 213 (320)
T cd05590 147 IF-------NGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAILNDEV- 213 (320)
T ss_pred Cc-------CCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhcCCC-
Confidence 21 11122345789999999999988999999999999999999999999975321 111111111000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
..|. .....+.+++.+|++.||++|| ++
T Consensus 214 ----------------~~~~--------~~~~~~~~li~~~L~~dP~~R~-~~ 241 (320)
T cd05590 214 ----------------VYPT--------WLSQDAVDILKAFMTKNPTMRL-GS 241 (320)
T ss_pred ----------------CCCC--------CCCHHHHHHHHHHcccCHHHCC-CC
Confidence 0000 0134568999999999999999 87
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=338.77 Aligned_cols=207 Identities=26% Similarity=0.356 Sum_probs=176.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++.+++||+|+++++.+.+. ..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~-----~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK-----LN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----Ce
Confidence 47899999999999999999999899999999997532 23345678899999999999999999999876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.|++.||+|||++ ||+||||||+||+++.++++||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKDT------LTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 8999999999999999986543 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCC----------------------------CCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHH
Q 001738 861 LAKFLYTCQVDDV----------------------------ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912 (1019)
Q Consensus 861 ~a~~~~~~~~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil 912 (1019)
+++.......... .........+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 9875432110000 000011245799999999999998999999999999999
Q ss_pred HHHHhCCCCCCC
Q 001738 913 LEMFIRKRPTDS 924 (1019)
Q Consensus 913 ~ell~g~~Pf~~ 924 (1019)
|||++|+.||.+
T Consensus 227 ~ell~G~~Pf~~ 238 (363)
T cd05628 227 YEMLIGYPPFCS 238 (363)
T ss_pred HHHHhCCCCCCC
Confidence 999999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=333.95 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=194.5
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|..+++++ +||||+++++++.+. ...|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC-----CEEEEEE
Confidence 4699999999999999989999999999753 223345678899999988 699999999999876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~~~------l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQRK------LPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 99999999998876543 89999999999999999999999 9999999999999999999999999998742
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc---ccHHHHHHHhCCc
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG---LTIHEFAMKALPQ 942 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~---~~~~~~~~~~~~~ 942 (1019)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||+...... ....++.......
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 219 (329)
T cd05588 147 IR-------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE 219 (329)
T ss_pred cc-------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc
Confidence 11 1112234578999999999999999999999999999999999999996432111 1111111111000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh------HHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE------MRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s------~~evl~ 1003 (1019)
.. ...| .....++.+++.+|++.||.+|| + ++|+++
T Consensus 220 ~~----------------~~~p--------~~~~~~~~~li~~~L~~dP~~R~-~~~~~~~~~~i~~ 261 (329)
T cd05588 220 KQ----------------IRIP--------RSLSVKASSVLKGFLNKDPKERL-GCHPQTGFRDIKS 261 (329)
T ss_pred CC----------------CCCC--------CCCCHHHHHHHHHHhccCHHHcC-CCCCCCCHHHHhc
Confidence 00 0001 01234578999999999999999 7 566654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=333.93 Aligned_cols=243 Identities=22% Similarity=0.318 Sum_probs=190.7
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++... ...++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC-----CEEEEEE
Confidence 4699999999999999989999999999753 233445677888888777 799999999998876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|..++..... +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~~~------l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQRK------LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999998876543 89999999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc---ccHHHHHHHhCCc
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG---LTIHEFAMKALPQ 942 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~---~~~~~~~~~~~~~ 942 (1019)
.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.......
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~ 219 (329)
T cd05618 147 LR-------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 219 (329)
T ss_pred cC-------CCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc
Confidence 11 1112234578999999999999999999999999999999999999996422111 1111111111000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
.. ...| .....++.+++.+||+.||++|| ++
T Consensus 220 ~~----------------~~~p--------~~~~~~~~~ll~~~L~~dP~~R~-~~ 250 (329)
T cd05618 220 KQ----------------IRIP--------RSLSVKAASVLKSFLNKDPKERL-GC 250 (329)
T ss_pred CC----------------CCCC--------CCCCHHHHHHHHHHhcCCHHHcC-CC
Confidence 00 0001 01134568999999999999999 83
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=342.02 Aligned_cols=259 Identities=24% Similarity=0.323 Sum_probs=203.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++.+. ++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE-----EH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC-----Ce
Confidence 47999999999999999999999899999999997432 23456788999999999999999999988776 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++++|.+++..... +++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKDV------FPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 8999999999999999987632 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCC----------------------CCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhC
Q 001738 861 LAKFLYTCQVD----------------------DVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918 (1019)
Q Consensus 861 ~a~~~~~~~~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g 918 (1019)
++......... ............||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 99765332100 00001122345789999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-
Q 001738 919 KRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE- 997 (1019)
Q Consensus 919 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s- 997 (1019)
+.||..... .+......... ..+ ..|... .....+.+++.+|+. ||.+|| +
T Consensus 227 ~~Pf~~~~~-----~~~~~~i~~~~------~~~---------~~p~~~------~~~~~~~~li~~ll~-dp~~R~-~s 278 (350)
T cd05573 227 FPPFYSDTL-----QETYNKIINWK------ESL---------RFPPDP------PVSPEAIDLICRLLC-DPEDRL-GS 278 (350)
T ss_pred CCCCCCCCH-----HHHHHHHhccC------Ccc---------cCCCCC------CCCHHHHHHHHHHcc-ChhhcC-CC
Confidence 999975321 11111111000 000 001000 024457889999997 999999 7
Q ss_pred HHHHHHH
Q 001738 998 MRNVVAK 1004 (1019)
Q Consensus 998 ~~evl~~ 1004 (1019)
++|+++.
T Consensus 279 ~~~ll~h 285 (350)
T cd05573 279 FEEIKSH 285 (350)
T ss_pred HHHHhcC
Confidence 9999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=325.85 Aligned_cols=256 Identities=21% Similarity=0.303 Sum_probs=201.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-----EKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----CEEE
Confidence 35799999999999999999999889999999999765544556788999999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... +++..+..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||++
T Consensus 83 iv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTGP------LSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 99999999999999875432 89999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
...... ........|++.|+|||.+. ...++.++||||+||++|||++|+.||......... . .
T Consensus 154 ~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-----~-~ 220 (267)
T cd06646 154 AKITAT-------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-----F-L 220 (267)
T ss_pred eeeccc-------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-----e-e
Confidence 865221 11122346889999999874 345788999999999999999999998542211000 0 0
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
.... ....+.. .........+.+++.+||+.+|++|| |++++++.+
T Consensus 221 ~~~~--~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~P~~Rp-~~~~il~~l 266 (267)
T cd06646 221 MSKS--NFQPPKL-----------------KDKTKWSSTFHNFVKISLTKNPKKRP-TAERLLTHL 266 (267)
T ss_pred eecC--CCCCCCC-----------------ccccccCHHHHHHHHHHhhCChhhCc-CHHHHhcCC
Confidence 0000 0000000 00011245678999999999999999 999998753
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=323.58 Aligned_cols=259 Identities=23% Similarity=0.378 Sum_probs=201.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE----EEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL----LVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
++|++.+.||+|+||+||+|.+..+++ .||+|.+.... .....++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 478899999999999999999876665 47777775332 2334677888889999999999999998743
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++|+||+++|+|.+++..... .+++..+..++.||+.||+|||++ +++||||||+||++++++.+||+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 346789999999999999976432 389999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||.++...... .........++..|+|||...+..++.++|||||||++||+++ |..||.+.... ...+...
T Consensus 153 fg~~~~~~~~~-----~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~ 225 (279)
T cd05111 153 FGVADLLYPDD-----KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLE 225 (279)
T ss_pred CccceeccCCC-----cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH
Confidence 99998653221 1111223456788999999988899999999999999999998 99998653211 1111110
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
... ..+.. ..+...+.+++.+||..+|++|| |+.|+++.|..+.+.
T Consensus 226 ~~~---------------------~~~~~------~~~~~~~~~li~~c~~~~p~~Rp-s~~el~~~l~~~~~~ 271 (279)
T cd05111 226 KGE---------------------RLAQP------QICTIDVYMVMVKCWMIDENVRP-TFKELANEFTRMARD 271 (279)
T ss_pred CCC---------------------cCCCC------CCCCHHHHHHHHHHcCCCcccCc-CHHHHHHHHHHHHhC
Confidence 000 00000 01233468889999999999999 999999999887653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=321.26 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=209.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|....+|+.||+|.++.. .....+.+.+|++++++++|++++++++++... +.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-----~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-----NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----Ce
Confidence 5899999999999999999999989999999988632 233356789999999999999999999998776 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++++|.+++...... ...+++.+++.++.|++.|++|||+. ||+||||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 89999999999999998754321 23489999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++....... .......+++.|+|||...+..++.++|||||||++|+|++|+.||..... ...+......
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~ 221 (267)
T cd08224 152 LGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIE 221 (267)
T ss_pred eeeeccCCC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhh
Confidence 987642211 111234678899999999888899999999999999999999999864321 1111111100
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
... .. | .........+.+++.+||+.+|++|| |+.+|++.++.+.
T Consensus 222 ~~~----~~--------------~-----~~~~~~~~~~~~~i~~cl~~~p~~Rp-~~~~il~~~~~~~ 266 (267)
T cd08224 222 KCD----YP--------------P-----LPADHYSEELRDLVSRCINPDPEKRP-DISYVLQVAKEMH 266 (267)
T ss_pred cCC----CC--------------C-----CChhhcCHHHHHHHHHHcCCCcccCC-CHHHHHHHHHHhc
Confidence 000 00 0 00112345678999999999999999 9999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=323.59 Aligned_cols=256 Identities=30% Similarity=0.469 Sum_probs=207.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..+|++.+.||+|+||.||+|.+.. ++.+|+|++..........+.+|+.+++.++||||+++++++... ...+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 78 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG-----EPVY 78 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC-----CCeE
Confidence 4578999999999999999999985 889999999866655567789999999999999999999998776 6689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.++++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~ 151 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLA 151 (261)
T ss_pred EEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccch
Confidence 99999999999999986542 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... .......++..|+|||...+..++.++||||||+++|+|++ |+.||..... ....+.......
T Consensus 152 ~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~ 222 (261)
T cd05148 152 RLIKEDV-------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQITAGYR 222 (261)
T ss_pred hhcCCcc-------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHHhCCc
Confidence 7653211 11113345778999999988889999999999999999998 8999865321 111111110000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.|.. ..+...+.+++.+||+.||.+|| |++++++.|+.+
T Consensus 223 ---------------------~~~~------~~~~~~~~~~i~~~l~~~p~~Rp-t~~~l~~~L~~~ 261 (261)
T cd05148 223 ---------------------MPCP------AKCPQEIYKIMLECWAAEPEDRP-SFKALREELDNI 261 (261)
T ss_pred ---------------------CCCC------CCCCHHHHHHHHHHcCCCchhCc-CHHHHHHHHhcC
Confidence 0000 12245678999999999999999 999999999753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=323.71 Aligned_cols=262 Identities=22% Similarity=0.312 Sum_probs=207.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||||.+... .....+++.+|+++++.++||||+++++++... +.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----NE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC-----Ce
Confidence 4788999999999999999999889999999988643 223446788999999999999999999998776 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++++|.+++..... ....+++..++.++.|++.|++|||++ +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 8999999999999999875322 123489999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++....... .......|+..|+|||+..+..++.++||||||+++|||++|..||.....+........
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---- 220 (267)
T cd08229 152 LGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI---- 220 (267)
T ss_pred hhhccccCC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhh----
Confidence 987652211 112234688999999999888899999999999999999999999864322111111000
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
.....+.. ........+.+++.+||+.||.+|| |+++|+++++++.
T Consensus 221 ----~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp-t~~~i~~~~~~~~ 266 (267)
T cd08229 221 ----EQCDYPPL------------------PSDHYSEELRQLVNMCINPDPEKRP-DITYVYDVAKRMH 266 (267)
T ss_pred ----hcCCCCCC------------------CcccccHHHHHHHHHhcCCCcccCC-CHHHHHHHHhhhc
Confidence 00000000 0012355689999999999999999 9999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=328.14 Aligned_cols=279 Identities=21% Similarity=0.256 Sum_probs=199.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcC---CCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNI---RHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+|++.+.||+|+||+||+|++..+++.||+|.++... ......+.+|+.+++++ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5889999999999999999999999999999987432 22234556777777665 699999999998765444446
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 7899999997 589998876432 2389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
|+++..... .......||..|+|||++.+..++.++||||+||++|||++|++||...... ..... ....
T Consensus 153 g~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~-~~~~ 222 (288)
T cd07863 153 GLARIYSCQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGK-IFDL 222 (288)
T ss_pred CccccccCc--------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHH-HHHH
Confidence 999765321 1122356799999999999889999999999999999999999999653221 11111 1111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
................. ......+.........+..+++.+++.+|+++||++|| |++|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-t~~~~l~ 284 (288)
T cd07863 223 IGLPPEDDWPRDVTLPR-GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRI-SAFRALQ 284 (288)
T ss_pred hCCCChhhCcccccccc-cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCC-CHHHHhc
Confidence 00000000000000000 00000000000000012345678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=320.85 Aligned_cols=251 Identities=27% Similarity=0.428 Sum_probs=198.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|++.+.||+|+||.||+|+++ ++..+|+|.+.... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ-----KPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccC-----CCEEE
Confidence 46888999999999999999986 56689999886432 2346788999999999999999999998765 66899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 9999999999999875432 288999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ........++..|+|||+..+..++.++||||||+++|||++ |+.||..... ....+.... .
T Consensus 149 ~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~---~ 217 (256)
T cd05114 149 YVLDDE------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISR---G 217 (256)
T ss_pred ccCCCc------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHC---C
Confidence 542211 111122345678999999988889999999999999999999 8999864211 111111110 0
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
. ... .|. .....+.+++.+||+.+|.+|| +++|+++.|
T Consensus 218 ~--~~~--------------~~~--------~~~~~~~~li~~c~~~~p~~Rp-s~~~l~~~l 255 (256)
T cd05114 218 F--RLY--------------RPK--------LASMTVYEVMYSCWHEKPEGRP-TFAELLRAI 255 (256)
T ss_pred C--CCC--------------CCC--------CCCHHHHHHHHHHccCCcccCc-CHHHHHHhh
Confidence 0 000 000 1134579999999999999999 999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=330.36 Aligned_cols=241 Identities=26% Similarity=0.317 Sum_probs=190.9
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|++..+|+.||+|+++... ....+....|..++... +||+|+++++++.+. ++.|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK-----EHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC-----CEEEEEE
Confidence 47999999999999999999999999997542 23345567788887754 899999999999876 7889999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDKGR------FDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999999876543 88999999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.....
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~~~~------ 211 (316)
T cd05620 147 VF-------GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESIRVD------ 211 (316)
T ss_pred cc-------CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC------
Confidence 11 11122345789999999999999999999999999999999999999965321 1111111100
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH-HHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR-NVV 1002 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~-evl 1002 (1019)
.+.+ |. ....++.+++.+||+.||++|| ++. ++.
T Consensus 212 ---~~~~-----------~~--------~~~~~~~~li~~~l~~dP~~R~-~~~~~~~ 246 (316)
T cd05620 212 ---TPHY-----------PR--------WITKESKDILEKLFERDPTRRL-GVVGNIR 246 (316)
T ss_pred ---CCCC-----------CC--------CCCHHHHHHHHHHccCCHHHcC-CChHHHH
Confidence 0000 00 0134568899999999999999 874 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=328.35 Aligned_cols=252 Identities=22% Similarity=0.281 Sum_probs=203.5
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..+|++.+.||+|+||.||+|++..+++.||+|.+........+.+.+|+.+++.++|||++++++.+... ...+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-----~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CEEE
Confidence 35899999999999999999999889999999999866555567788999999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++.... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 94 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 94 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred EeecccCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccc
Confidence 9999999999999987543 78999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ..... . ..
T Consensus 164 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~~~~-~---~~ 231 (296)
T cd06654 164 AQITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLI-A---TN 231 (296)
T ss_pred hhccccc-------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hHHHH-h---cC
Confidence 7542211 11223468899999999988889999999999999999999999996532110 00000 0 00
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..... .. .......+.+++.+||..+|++|| +++|+++.
T Consensus 232 ~~~~~-------------------~~---~~~~~~~l~~li~~~l~~~p~~Rp-t~~eil~~ 270 (296)
T cd06654 232 GTPEL-------------------QN---PEKLSAIFRDFLNRCLDMDVEKRG-SAKELLQH 270 (296)
T ss_pred CCCCC-------------------CC---ccccCHHHHHHHHHHCcCCcccCc-CHHHHhhC
Confidence 00000 00 011234578899999999999999 99999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=324.28 Aligned_cols=276 Identities=26% Similarity=0.370 Sum_probs=205.3
Q ss_pred CCCCCCCceeccccEEEEEEEe----CCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.+|++.+.||+|+||.||+|.. ..+++.||+|.++.......+.+.+|++++++++||||+++++++...+. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---R 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC---C
Confidence 4788999999999999999974 34688999999986666666788999999999999999999998765432 4
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 67999999999999999975432 289999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
|++........ .........++..|+|||+..+..++.++|||||||++|||++|..|+..... ...+....
T Consensus 153 g~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~- 224 (284)
T cd05081 153 GLTKVLPQDKE----YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRMMGN- 224 (284)
T ss_pred cccccccCCCc----ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhhccc-
Confidence 99986532211 00011112345569999999888899999999999999999999877643211 11110000
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
..........+...... ....|. ...+...+.+++.+||+.+|++|| |++||++.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~li~~cl~~~p~~Rp-t~~ei~~~l~~~ 283 (284)
T cd05081 225 --DKQGQMIVYHLIELLKN-NGRLPA------PPGCPAEIYAIMKECWNNDPSQRP-SFSELALQVEAI 283 (284)
T ss_pred --ccccccchHHHHHHHhc-CCcCCC------CCCCCHHHHHHHHHHccCChhhCC-CHHHHHHHHHhc
Confidence 00000011111110100 000010 112345689999999999999999 999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=320.45 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=203.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCC---CEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEG---GLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
++|++.+.||+|+||+||+|++..+ ...||+|+++... .....++.+|+.++++++||||+++++++... +
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS-----R 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC-----C
Confidence 5799999999999999999998643 4689999987543 33456788999999999999999999998765 5
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||++++++.+||+||
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECcc
Confidence 68999999999999999976442 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+++...... .........++..|+|||...+..++.++||||||+++|||++ |..||...... ...+....
T Consensus 151 g~~~~~~~~~-----~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~ 223 (266)
T cd05033 151 GLSRRLEDSE-----ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVED 223 (266)
T ss_pred chhhcccccc-----cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHc
Confidence 9998763111 1111112345678999999998899999999999999999998 99998643211 11111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.. ..|.. ..+...+.+++.+||+.+|++|| +++||++.|.++
T Consensus 224 ~~---------------------~~~~~------~~~~~~l~~li~~cl~~~p~~Rp-~~~ei~~~l~~~ 265 (266)
T cd05033 224 GY---------------------RLPPP------MDCPSALYQLMLDCWQKDRNERP-TFSQIVSTLDKM 265 (266)
T ss_pred CC---------------------CCCCC------CCCCHHHHHHHHHHcCCCcccCc-CHHHHHHHHHhh
Confidence 00 00000 11245678999999999999999 999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=341.98 Aligned_cols=206 Identities=23% Similarity=0.314 Sum_probs=174.7
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|++.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. +..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~-----~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-----DNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC-----CEE
Confidence 6889999999999999999999899999999987432 23456788999999999999999999999876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|+||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~~------~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMGI------FPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 999999999999999976542 88999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCC----------------------------------------CCCCCcccccccCCcccCcccccCCCCCC
Q 001738 862 AKFLYTCQVDD----------------------------------------VETPSSSIGIKGTVGYVAPEYGMGSEASM 901 (1019)
Q Consensus 862 a~~~~~~~~~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 901 (1019)
|.......... ...........||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 75331100000 00000112357999999999999989999
Q ss_pred cchHHHHHHHHHHHHhCCCCCCC
Q 001738 902 AGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 902 ~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
++||||+||++|||++|+.||..
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCC
Confidence 99999999999999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=329.30 Aligned_cols=242 Identities=25% Similarity=0.348 Sum_probs=191.2
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+++.||+|+++... ....+....|..++... +||||+++++++.+. +..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK-----ENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC-----CEEEEEE
Confidence 46999999999999999899999999997542 23345567788888764 899999999999876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSCHK------FDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 99999999999976542 88999999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+....
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~~------- 210 (316)
T cd05619 147 MLG-------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIRM------- 210 (316)
T ss_pred CCC-------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh-------
Confidence 111 1122345789999999999988999999999999999999999999975321 111111100
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH-HHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR-NVVA 1003 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~-evl~ 1003 (1019)
..+.. |. .....+.+++.+||+.||++|| ++. ++.+
T Consensus 211 --~~~~~-----------~~--------~~~~~~~~li~~~l~~~P~~R~-~~~~~l~~ 247 (316)
T cd05619 211 --DNPCY-----------PR--------WLTREAKDILVKLFVREPERRL-GVKGDIRQ 247 (316)
T ss_pred --CCCCC-----------Cc--------cCCHHHHHHHHHHhccCHhhcC-CChHHHHc
Confidence 00000 00 0134468899999999999999 886 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=321.58 Aligned_cols=255 Identities=25% Similarity=0.412 Sum_probs=202.3
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.++||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKE-----EPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CCcE
Confidence 357899999999999999999976 667899998865432 347789999999999999999999988765 5679
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.++++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 99999999999999976432 2378899999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... ........++..|+|||+..+..++.++|||||||++|||++ |+.||...... ..........
T Consensus 151 ~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~- 221 (261)
T cd05072 151 RVIEDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGY- 221 (261)
T ss_pred eecCCCc------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC-
Confidence 8653211 111122345778999999988889999999999999999998 99998653211 1111111000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
. .|.. ..+..++.+++.+|++.+|++|| +++++.+.|++
T Consensus 222 -------~-------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp-~~~~i~~~l~~ 260 (261)
T cd05072 222 -------R-------------MPRM------ENCPDELYDIMKTCWKEKAEERP-TFDYLQSVLDD 260 (261)
T ss_pred -------C-------------CCCC------CCCCHHHHHHHHHHccCCcccCc-CHHHHHHHHhc
Confidence 0 0000 11245578999999999999999 99999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=324.35 Aligned_cols=262 Identities=24% Similarity=0.414 Sum_probs=201.5
Q ss_pred hhCCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDS 775 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 775 (1019)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... .....++.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-- 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-- 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4568999999999999999999864 235789999986432 23345688999999999999999999998765
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCC----CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQH----DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD 851 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 851 (1019)
...++||||+++++|.+++....... ....+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 82 ---QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred ---CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 67899999999999999997643211 123367889999999999999999999 99999999999999999
Q ss_pred CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 001738 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGL 930 (1019)
Q Consensus 852 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~ 930 (1019)
+.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||..... .
T Consensus 156 ~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~ 228 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--E 228 (277)
T ss_pred CCEEECCCCCccccCCcce-----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--H
Confidence 9999999999875432221 111112345788999999998889999999999999999999 7888865321 1
Q ss_pred cHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 931 TIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
...+.... ....+ .| ..+...+.+++.+||+.+|++|| |+.|+++.|+
T Consensus 229 ~~~~~~~~---~~~~~----------------~~--------~~~~~~~~~li~~~l~~~p~~Rp-s~~e~l~~l~ 276 (277)
T cd05062 229 QVLRFVME---GGLLD----------------KP--------DNCPDMLFELMRMCWQYNPKMRP-SFLEIISSIK 276 (277)
T ss_pred HHHHHHHc---CCcCC----------------CC--------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHhh
Confidence 11111100 00000 00 11245689999999999999999 9999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=340.68 Aligned_cols=254 Identities=19% Similarity=0.249 Sum_probs=199.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~-----~ 116 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD-----K 116 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----C
Confidence 45899999999999999999999989999999999643 222335578899999999999999999998876 7
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
+.|+||||+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~~-------l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 117 YLYMVMEYMPGGDLVNLMSNYD-------IPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEec
Confidence 7999999999999999987543 78888999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS----EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
|++....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...
T Consensus 187 G~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~ 255 (370)
T cd05596 187 GTCMKMDANG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGT 255 (370)
T ss_pred cceeeccCCC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HHH
Confidence 9997653211 1112245799999999987653 478999999999999999999999975321 111
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCc--hhHhHHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPID--RTLEMRNVVAK 1004 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RP~s~~evl~~ 1004 (1019)
......... . + ..|.. ......+.+++.+|++.+|.+ || +++|+++.
T Consensus 256 ~~~i~~~~~-~-----~---------~~~~~------~~~s~~~~~li~~~L~~~p~r~~R~-s~~ell~h 304 (370)
T cd05596 256 YSKIMDHKN-S-----L---------TFPDD------IEISKQAKDLICAFLTDREVRLGRN-GVDEIKSH 304 (370)
T ss_pred HHHHHcCCC-c-----C---------CCCCc------CCCCHHHHHHHHHHccChhhccCCC-CHHHHhcC
Confidence 111110000 0 0 00000 012345788999999999988 99 99999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=318.10 Aligned_cols=249 Identities=28% Similarity=0.381 Sum_probs=195.3
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
+.||+|+||.||+|++..+++.||+|.+.... .+....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CCeEEEEeec
Confidence 46999999999999998899999999886432 33456789999999999999999999998776 6689999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEGP-----RLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999975432 378999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEI 947 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1019)
. .........++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..........+
T Consensus 148 ~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~~~~------ 214 (252)
T cd05084 148 V-----YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQGVR------ 214 (252)
T ss_pred c-----ccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCC------
Confidence 1 0000111123567999999998889999999999999999998 88888642111 11111100000
Q ss_pred cChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 948 VDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 948 ~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.+.. ..+...+.+++.+|++.+|++|| |++||.++|+
T Consensus 215 ---------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp-s~~~~~~~l~ 251 (252)
T cd05084 215 ---------------LPCP------ELCPDAVYRLMERCWEYDPGQRP-SFSTVHQELQ 251 (252)
T ss_pred ---------------CCCc------ccCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHh
Confidence 0000 11245688999999999999999 9999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=325.13 Aligned_cols=265 Identities=27% Similarity=0.388 Sum_probs=205.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE--EEEEEEeecc-cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL--LVAVKVLNLT-RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 779 (1019)
++|++.+.||+|+||.||+|....++. .+++|.++.. .....+.+.+|+++++++ +||||+++++++... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR-----G 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC-----C
Confidence 579999999999999999999876664 4788888742 333456788999999999 799999999998765 5
Q ss_pred eEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 849 (1019)
..++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 689999999999999999764311 1123488999999999999999999999 999999999999999
Q ss_pred CCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCC
Q 001738 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFND 928 (1019)
Q Consensus 850 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~ 928 (1019)
.++.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~- 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC- 224 (297)
T ss_pred CCCeEEECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 9999999999998632110 01111223567999999988889999999999999999997 9999965321
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.+...... ... .+.. | ..+...+.+++.+||+.+|.+|| +++++++.|..+
T Consensus 225 ----~~~~~~~~-~~~----~~~~-----------~--------~~~~~~~~~li~~~l~~~p~~Rp-~~~~i~~~l~~~ 275 (297)
T cd05089 225 ----AELYEKLP-QGY----RMEK-----------P--------RNCDDEVYELMRQCWRDRPYERP-PFAQISVQLSRM 275 (297)
T ss_pred ----HHHHHHHh-cCC----CCCC-----------C--------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHH
Confidence 11111110 000 0000 0 11245578999999999999999 999999999998
Q ss_pred HHhhhh
Q 001738 1009 REAFLS 1014 (1019)
Q Consensus 1009 ~~~~~~ 1014 (1019)
...+..
T Consensus 276 ~~~~~~ 281 (297)
T cd05089 276 LEARKA 281 (297)
T ss_pred HHhhcc
Confidence 876644
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=330.35 Aligned_cols=242 Identities=26% Similarity=0.309 Sum_probs=193.9
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+++.||+|+++... ......+..|.++++.+ +||||+++++++... +..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~-----~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK-----DRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CEEEEEE
Confidence 46999999999999999889999999997542 23345677888998888 699999999998876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~~------l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRSGR------FDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 99999999999876543 89999999999999999999999 9999999999999999999999999998742
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........|++.|+|||++.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 147 ~~-------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~~~i~~~~~- 213 (318)
T cd05570 147 IL-------GGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELFQSILEDEV- 213 (318)
T ss_pred Cc-------CCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHcCCC-
Confidence 11 11122235689999999999999999999999999999999999999965321 111111100000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH-----HHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM-----RNVVA 1003 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~-----~evl~ 1003 (1019)
..| ......+.+++.+||+.||.+|| ++ .++++
T Consensus 214 ----------------~~~--------~~~~~~~~~li~~~l~~dP~~R~-s~~~~~~~~ll~ 251 (318)
T cd05570 214 ----------------RYP--------RWLSKEAKSILKSFLTKNPEKRL-GCLPTGEQDIKG 251 (318)
T ss_pred ----------------CCC--------CcCCHHHHHHHHHHccCCHHHcC-CCCCCCHHHHhc
Confidence 000 01234578999999999999999 98 77765
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=333.96 Aligned_cols=247 Identities=24% Similarity=0.405 Sum_probs=206.7
Q ss_pred CCCceeccccEEEEEEEeCCCCEEEEEEEeec----ccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL----TRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 708 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
...+||+|+|-+||+|.+..+|..||--.++. ..+...++|..|+++|+.++||||+++|.++.+... ....+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n---~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN---KTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC---ceeee
Confidence 34689999999999999999999988755442 234456889999999999999999999999988754 56789
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCCeEEeeeccc
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDFGLA 862 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a 862 (1019)
|+|.+..|+|..|.++.+. +....++.|++||++||.|||++ .|+|+|||||-+||||+. .|.|||+|+|+|
T Consensus 121 iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 9999999999999998875 88899999999999999999998 789999999999999975 589999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
.... ......+.|||.|||||+.. ..|++.+||||||+.+.||+|+..||........-+........|.
T Consensus 194 tl~r---------~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~ 263 (632)
T KOG0584|consen 194 TLLR---------KSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPA 263 (632)
T ss_pred HHhh---------ccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHH
Confidence 8763 22333479999999999987 6899999999999999999999999986554443344444444444
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+..+-||. +.++|.+|+.. ..+|| |+.|++.
T Consensus 264 sl~kV~dPe---------------------------vr~fIekCl~~-~~~R~-sa~eLL~ 295 (632)
T KOG0584|consen 264 ALSKVKDPE---------------------------VREFIEKCLAT-KSERL-SAKELLK 295 (632)
T ss_pred HhhccCCHH---------------------------HHHHHHHHhcC-chhcc-CHHHHhh
Confidence 555555543 47899999998 99999 9999976
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=324.39 Aligned_cols=261 Identities=25% Similarity=0.454 Sum_probs=202.0
Q ss_pred CCCCCCCceeccccEEEEEEEe----CCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|++.+.||+|+||.||+|.+ ..+++.||+|.++... ......+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE----- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC-----
Confidence 4688889999999999999985 3356789999987433 33446788999999999999999999998776
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCC-----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceE
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQ-----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVL 847 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 847 (1019)
...|+||||+++++|.+++...... .....+++.++..++.|++.||+|||++ +|+||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 5689999999999999998643210 0123478999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCC
Q 001738 848 LDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMF 926 (1019)
Q Consensus 848 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~ 926 (1019)
++.++.+||+|||+++...... .........++..|+|||+..+..++.++|||||||++|||++ |..||....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSAD-----YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS 231 (283)
T ss_pred EcCCCcEEeccccccccccCCc-----ceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999997653221 1111223345778999999988889999999999999999998 988986531
Q ss_pred CCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 927 NDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
. ....+...... .. +.. ..+..++.+++.+||+.||++|| ++.+|.+.|+
T Consensus 232 ~--~~~~~~~~~~~---~~------------------~~~------~~~~~~~~~li~~cl~~~p~~Rp-~~~~i~~~l~ 281 (283)
T cd05090 232 N--QEVIEMVRKRQ---LL------------------PCS------EDCPPRMYSLMTECWQEGPSRRP-RFKDIHTRLR 281 (283)
T ss_pred H--HHHHHHHHcCC---cC------------------CCC------CCCCHHHHHHHHHHcccCcccCc-CHHHHHHHhh
Confidence 1 11111111100 00 000 11245678899999999999999 9999999886
Q ss_pred H
Q 001738 1007 A 1007 (1019)
Q Consensus 1007 ~ 1007 (1019)
+
T Consensus 282 ~ 282 (283)
T cd05090 282 S 282 (283)
T ss_pred c
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=331.90 Aligned_cols=268 Identities=22% Similarity=0.332 Sum_probs=203.7
Q ss_pred hCCCCCCCceeccccEEEEEEEe-----CCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDS 775 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 775 (1019)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++... ......+.+|+.++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG- 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-
Confidence 35899999999999999999984 2467899999997543 23346788999999999 6899999999886542
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCC---------------------------------------------------
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQH--------------------------------------------------- 804 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 804 (1019)
...++||||+++|+|.+++.......
T Consensus 85 ---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 85 ---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred ---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 45789999999999999987532100
Q ss_pred ----------CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCC
Q 001738 805 ----------DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874 (1019)
Q Consensus 805 ----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 874 (1019)
....+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~----- 233 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDP----- 233 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCc-----
Confidence 012378889999999999999999999 99999999999999999999999999997642211
Q ss_pred CCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhh
Q 001738 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLL 953 (1019)
Q Consensus 875 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 953 (1019)
.........++..|+|||+..+..++.++||||||+++|||++ |..||....... ...........
T Consensus 234 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~------------ 300 (343)
T cd05103 234 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTR------------ 300 (343)
T ss_pred chhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccCC------------
Confidence 1111122345678999999988889999999999999999997 999986532211 11110000000
Q ss_pred hhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 954 LEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 954 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
...|. ....++.+++..||+.+|++|| |+.||++.|+.+.++
T Consensus 301 -------~~~~~--------~~~~~~~~~~~~cl~~~p~~Rp-s~~eil~~l~~~~~~ 342 (343)
T cd05103 301 -------MRAPD--------YTTPEMYQTMLDCWHGEPSQRP-TFSELVEHLGNLLQA 342 (343)
T ss_pred -------CCCCC--------CCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHHHhc
Confidence 00000 0123578999999999999999 999999999988653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=336.29 Aligned_cols=280 Identities=20% Similarity=0.218 Sum_probs=202.2
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC-CC
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDS-HG 777 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 777 (1019)
...++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578999999999999999999998899999999986432 2234567789999999999999999998764422 12
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
....|+++|++ +++|.++++... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQK-------LSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 24578999988 789998886533 89999999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 936 (1019)
|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .......
T Consensus 161 Dfg~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~ 228 (343)
T cd07878 161 DFGLARQADD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY--IDQLKRI 228 (343)
T ss_pred CCccceecCC----------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHH
Confidence 9999985421 1224578999999999876 4689999999999999999999999965321 1111111
Q ss_pred HHhCCc---chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 937 MKALPQ---RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 937 ~~~~~~---~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...... .....+.......+.......|..............+.+++.+|++.||.+|| |++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~-s~~ell~h 298 (343)
T cd07878 229 MEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI-SASEALAH 298 (343)
T ss_pred HHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC-CHHHHhcC
Confidence 111111 11111111111001000000010000000001123468999999999999999 99999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=328.64 Aligned_cols=253 Identities=24% Similarity=0.266 Sum_probs=208.8
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch---hhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG---AFKSFVAECEALRNIR-HRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 777 (1019)
....|++.+.||+|.||.||+++.+.+|+.+|+|++++.... ..+.+.+|+.+|+++. |||||.++++|++.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~---- 108 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP---- 108 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC----
Confidence 345799999999999999999999999999999999755332 3468899999999998 99999999999988
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC----CC
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD----MV 853 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~ 853 (1019)
...++|||+++||.|.+.+... .+++..+..++.|++.|++|+|+. ||||||+||+|+|+... +.
T Consensus 109 -~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 109 -DSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred -CeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 6899999999999999999876 189999999999999999999999 99999999999999643 57
Q ss_pred eEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 001738 854 AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~ 933 (1019)
+|++|||+|..... .......+||+.|+|||++.+..|+..+||||+||++|.|++|.+||.+..... ...
T Consensus 178 ik~~DFGla~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~-~~~ 248 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE-IFL 248 (382)
T ss_pred EEEeeCCCceEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH-HHH
Confidence 99999999987632 334556899999999999999999999999999999999999999997643221 111
Q ss_pred HHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 934 EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 934 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.... ..+ + ++. +......+...+++..|+..||.+|+ |+.++++.
T Consensus 249 ~i~~----~~~-~-f~~-------------------~~w~~is~~akd~i~~ll~~dp~~R~-ta~~~L~H 293 (382)
T KOG0032|consen 249 AILR----GDF-D-FTS-------------------EPWDDISESAKDFIRKLLEFDPRKRL-TAAQALQH 293 (382)
T ss_pred HHHc----CCC-C-CCC-------------------CCccccCHHHHHHHHHhcccCcccCC-CHHHHhcC
Confidence 1111 111 0 111 11112245578999999999999999 99999984
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=321.50 Aligned_cols=250 Identities=23% Similarity=0.335 Sum_probs=198.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++... +..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEEE
Confidence 3688899999999999999999889999999998754 233446788999999999999999999999876 6788
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++
T Consensus 76 lv~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 76 ICTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 999999999997652 168888999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccH--HHHHHHhC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI--HEFAMKAL 940 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~--~~~~~~~~ 940 (1019)
..... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||.......... .+......
T Consensus 143 ~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 213 (279)
T cd06619 143 TQLVN---------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV 213 (279)
T ss_pred eeccc---------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh
Confidence 75421 11223578999999999998899999999999999999999999997533221111 01000000
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. ..+. .+. .....++.+++.+|++.+|++|| +++|+++.
T Consensus 214 ~~-----~~~~-----------~~~-------~~~~~~~~~li~~~l~~~P~~Rp-~~~eil~~ 253 (279)
T cd06619 214 DE-----DPPV-----------LPV-------GQFSEKFVHFITQCMRKQPKERP-APENLMDH 253 (279)
T ss_pred cc-----CCCC-----------CCC-------CcCCHHHHHHHHHHhhCChhhCC-CHHHHhcC
Confidence 00 0000 000 01134578999999999999999 99999875
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=322.97 Aligned_cols=261 Identities=26% Similarity=0.379 Sum_probs=203.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE----EEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL----LVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|++.++||+|+||+||+|++..+++ +||+|+++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----- 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS----- 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-----
Confidence 578899999999999999999876665 58999986443 33456788999999999999999999998643
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
..++++||+++|+|.++++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 82 -~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~d 152 (279)
T cd05109 82 -TVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITD 152 (279)
T ss_pred -CcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECC
Confidence 46799999999999999976432 389999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||+++...... .........+++.|+|||...+..++.++|||||||++|||++ |..||..... ........
T Consensus 153 fG~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~ 225 (279)
T cd05109 153 FGLARLLDIDE-----TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLE 225 (279)
T ss_pred CCceeeccccc-----ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH
Confidence 99998653211 1111112345678999999988899999999999999999998 8999864321 11111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhhh
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~~ 1013 (1019)
.... .+. ...+...+.+++.+||+.||++|| ++.|+++.+..+.....
T Consensus 226 ~~~~---------------------~~~------~~~~~~~~~~li~~~l~~dp~~Rp-~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 226 KGER---------------------LPQ------PPICTIDVYMIMVKCWMIDSECRP-RFRELVDEFSRMARDPS 273 (279)
T ss_pred CCCc---------------------CCC------CccCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHhhcCCc
Confidence 0000 000 011244578999999999999999 99999999988865543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=322.16 Aligned_cols=246 Identities=26% Similarity=0.307 Sum_probs=192.2
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||+|+||+||+++.+.+|+.||+|++.... ....+.+..|++++++++||||+++++++... .+.++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~-----~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK-----THLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC-----CeEEEEEecC
Confidence 699999999999999899999999986422 22234556799999999999999999998765 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 76 ~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999998865432 2388999999999999999999999 9999999999999999999999999998765321
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
.......|++.|+|||++.+..++.++||||+||++|||++|+.||....... ...+..........
T Consensus 149 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~---- 215 (277)
T cd05607 149 --------KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDEV---- 215 (277)
T ss_pred --------ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhcccc----
Confidence 11123468999999999998889999999999999999999999997532211 11111111110000
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. . .......++.+++.+||++||++|| +++|+++
T Consensus 216 ~---------------~-----~~~~~~~~~~~li~~~L~~~P~~R~-~~~~~~~ 249 (277)
T cd05607 216 K---------------F-----EHQNFTEESKDICRLFLAKKPEDRL-GSREKND 249 (277)
T ss_pred c---------------c-----ccccCCHHHHHHHHHHhccCHhhCC-CCccchh
Confidence 0 0 0001234578999999999999999 9976653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=339.14 Aligned_cols=281 Identities=22% Similarity=0.225 Sum_probs=202.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||+||+|++..+++.||+|++... .....+++.+|+++++.++||||+++++++...........|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999889999999998643 223446788999999999999999999998876433334789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||++ ++|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~------l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQP------LSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 688888865442 89999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+...... ........+++.|+|||++.+. .++.++||||+||++|||++|+.||...... ...+.......
T Consensus 151 ~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~g 222 (372)
T cd07853 151 RVEEPDE------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDLLG 222 (372)
T ss_pred eecccCc------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcC
Confidence 8642211 1122234678999999998774 4799999999999999999999999753221 11111111111
Q ss_pred cchhhccCh---hhhhhhhccCCCCCCCCC-CccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QRVIEIVDP---LLLLEVRTNNSKNPCGDG-RGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~---~l~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
....+.+.. .............|.... .....+..+++.+++.+|++.||++|| |++|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~-t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRI-SAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCc-CHHHHhcC
Confidence 110000000 000000000000000000 000011245678999999999999999 99999874
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=331.15 Aligned_cols=242 Identities=24% Similarity=0.281 Sum_probs=192.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcce
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
+|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+..|..++... +|++|+++++++... +.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM-----DR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----CE
Confidence 5888999999999999999999899999999997532 22334567788888777 589999999988776 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVGR------FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 8999999999999999876543 88999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+....
T Consensus 147 ~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~i~~-- 215 (323)
T cd05616 147 MCKENMWD-------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIME-- 215 (323)
T ss_pred CceecCCC-------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHHHHh--
Confidence 98753211 1122345789999999999999999999999999999999999999975321 111111110
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
.. . ..|. ....++.+++.+|++.||.+|+ +.
T Consensus 216 -~~--------~---------~~p~--------~~s~~~~~li~~~l~~~p~~R~-~~ 246 (323)
T cd05616 216 -HN--------V---------AYPK--------SMSKEAVAICKGLMTKHPGKRL-GC 246 (323)
T ss_pred -CC--------C---------CCCC--------cCCHHHHHHHHHHcccCHHhcC-CC
Confidence 00 0 0000 1134568899999999999999 74
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=325.87 Aligned_cols=256 Identities=25% Similarity=0.429 Sum_probs=211.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCC----CEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEG----GLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
..+..++||+|.||.||+|.+..- .--||||.-+.+ ..+..+.|..|+.+|+.++||||++++|+|.+.
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 345567899999999999987422 236899998864 344568899999999999999999999999874
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
-.|||||.++.|.|..|++.+... ++......++.||+.||+|||+. ..|||||..+|||+....-|||+||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred ceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 479999999999999999987653 88889999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+++.+..+.+... ....-+..|||||.+.-+.++.++|||-|||.+||++. |..||.+..+.+.
T Consensus 536 GLSR~~ed~~yYka------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV-------- 601 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKA------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV-------- 601 (974)
T ss_pred chhhhccccchhhc------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------
Confidence 99998765543322 12334678999999999999999999999999999987 9999987544321
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
+-..- ..++-|++ +.|+..++.++.+||.++|.+|| .+.|+...|.++..
T Consensus 602 ---------I~~iE------nGeRlP~P------~nCPp~LYslmskcWayeP~kRP-rftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 ---------IGHIE------NGERLPCP------PNCPPALYSLMSKCWAYEPSKRP-RFTEIKAILSDVLQ 651 (974)
T ss_pred ---------EEEec------CCCCCCCC------CCCChHHHHHHHHHhccCcccCC-cHHHHHHHHHHHHH
Confidence 11000 11223333 34677899999999999999999 99999999988876
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=317.77 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=203.1
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|.+..+++.||+|.+... .....+.+.+|++++++++|||++++++++... +..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 478889999999999999999989999999998743 234457788999999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 99999999999999987532 2389999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
+...... .......|++.|+|||+..+..++.++|||||||++|||++|+.||..... .+........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~ 216 (256)
T cd08529 149 KLLSDNT-------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILKIIRG 216 (256)
T ss_pred eeccCcc-------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC
Confidence 8653211 112234678999999999998899999999999999999999999965321 1111111000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. ..+ . .......+.+++.+||+.+|++|| ++.++++.
T Consensus 217 ~----~~~-~-------------------~~~~~~~~~~~i~~~l~~~p~~Rp-~~~~ll~~ 253 (256)
T cd08529 217 V----FPP-V-------------------SQMYSQQLAQLIDQCLTKDYRQRP-DTFQLLRN 253 (256)
T ss_pred C----CCC-C-------------------ccccCHHHHHHHHHHccCCcccCc-CHHHHhhC
Confidence 0 000 0 012245679999999999999999 99999864
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=318.27 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=202.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-----chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-----KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
++|++.+.||+|++|.||+|....+++.||+|+++... ....+.+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----- 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC-----
Confidence 57899999999999999999998889999999986432 12345688999999999999999999999876
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
+..++|+||+++++|.+++..... +++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYGA------LTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 678999999999999999986543 88999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||.++....... .........|+..|+|||+..+..++.++||||+|+++|||++|+.||..... . .....
T Consensus 148 fg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~-~~~~~ 218 (263)
T cd06625 148 FGASKRLQTICS----SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----M-AAIFK 218 (263)
T ss_pred cccceecccccc----ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----H-HHHHH
Confidence 999976432110 11111234578899999999998899999999999999999999999865211 1 11111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
....... +.+ ...+...+.+++.+||+.+|.+|| |+.|+++.
T Consensus 219 ~~~~~~~----~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rp-t~~~ll~~ 260 (263)
T cd06625 219 IATQPTN----PQL-------------------PSHVSPDARNFLRRTFVENAKKRP-SAEELLRH 260 (263)
T ss_pred HhccCCC----CCC-------------------CccCCHHHHHHHHHHhhcCcccCC-CHHHHhhC
Confidence 0000000 000 011244578999999999999999 99999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=331.91 Aligned_cols=243 Identities=23% Similarity=0.321 Sum_probs=191.5
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.++.++ +||+|+++++++... ...|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT-----SRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC-----CEEEEEE
Confidence 46999999999999999899999999997542 23446678899999888 699999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|..++..... +++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~~------l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQRK------LPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 99999999998876543 89999999999999999999999 9999999999999999999999999998742
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc-ccHHHHHHHhCCcch
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG-LTIHEFAMKALPQRV 944 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~ 944 (1019)
.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..........
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 219 (327)
T cd05617 147 LG-------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP 219 (327)
T ss_pred cC-------CCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC
Confidence 11 1112234578999999999999999999999999999999999999996532211 111111111110000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
. ..|. .....+.+++.+|++.||++|+ ++
T Consensus 220 ~----------------~~p~--------~~~~~~~~li~~~L~~dP~~R~-~~ 248 (327)
T cd05617 220 I----------------RIPR--------FLSVKASHVLKGFLNKDPKERL-GC 248 (327)
T ss_pred C----------------CCCC--------CCCHHHHHHHHHHhccCHHHcC-CC
Confidence 0 0000 0134468899999999999999 75
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=329.52 Aligned_cols=243 Identities=26% Similarity=0.300 Sum_probs=191.4
Q ss_pred CceeccccEEEEEEEeC---CCCEEEEEEEeeccc----chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 710 NMIGQGSFGFVYRGILG---EGGLLVAVKVLNLTR----KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.+++.++||||+++++++... +..|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-----~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG-----GKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-----CeEE
Confidence 68999999999999863 468899999997432 22345678899999999999999999998876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 LILEYLSGGELFMHLEREGI------FMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEeCCCCchHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 99999999999999976543 78889999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........
T Consensus 148 ~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~~~~ 215 (323)
T cd05584 148 KESIHE-------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKILKG 215 (323)
T ss_pred eecccC-------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcC
Confidence 753211 1122235789999999999988899999999999999999999999975321 1111111110
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhH----hHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTL----EMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~----s~~evl~ 1003 (1019)
. . ..| ......+.+++.+||+.||++||. +++++++
T Consensus 216 ~--------~---------~~~--------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 216 K--------L---------NLP--------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C--------C---------CCC--------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 0 0 000 011345789999999999999994 3555544
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=323.48 Aligned_cols=253 Identities=25% Similarity=0.294 Sum_probs=197.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|++.+.||+|+||+||++.+..+++.||+|++.... ......+.+|+.++++++||||+++++++.+. ++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC-----CeE
Confidence 4788899999999999999998889999999986432 22234567899999999999999999998776 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999998865432 2389999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... ......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.......
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~~~~~~~ 218 (285)
T cd05605 149 AVEIPEGE--------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREEVERRVK 218 (285)
T ss_pred ceecCCCC--------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHHHHHHhh
Confidence 97642211 112346899999999999888999999999999999999999999753211 11111111110
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhH----hHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTL----EMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~----s~~evl~ 1003 (1019)
... ..+. ......+.+++.+||+.||++||. +++++++
T Consensus 219 ~~~-~~~~-----------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 219 EDQ-EEYS-----------------------EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hcc-cccC-----------------------cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 000 0000 112445789999999999999993 3445544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=338.21 Aligned_cols=202 Identities=21% Similarity=0.318 Sum_probs=174.4
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
..++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~----- 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD----- 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----
Confidence 346899999999999999999999989999999998642 222345678899999999999999999999876
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||+++|+|.+++.... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~~-------~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~D 185 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNYD-------VPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLAD 185 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEe
Confidence 77999999999999999997543 78899999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS----EASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
||+|....... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 186 FG~a~~~~~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 186 FGTCMKMDETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred cccceecccCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 99998653211 1112345799999999998654 378899999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=330.50 Aligned_cols=237 Identities=24% Similarity=0.306 Sum_probs=189.3
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|.+++..+ +||+|+++++++... +..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK-----DRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CeEEEEE
Confidence 4699999999999999988999999999753 233445677888888866 799999999999876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 76 E~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRSRK------FDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999999876543 89999999999999999999999 9999999999999999999999999998753
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~~~~i~~~~~- 213 (321)
T cd05591 147 ILN-------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDLFESILHDDV- 213 (321)
T ss_pred ccC-------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCC-
Confidence 211 1122345789999999999988999999999999999999999999975321 111111111000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
..|. .....+.+++.+|++.||++|| +.
T Consensus 214 ----------------~~p~--------~~~~~~~~ll~~~L~~dp~~R~-~~ 241 (321)
T cd05591 214 ----------------LYPV--------WLSKEAVSILKAFMTKNPNKRL-GC 241 (321)
T ss_pred ----------------CCCC--------CCCHHHHHHHHHHhccCHHHcC-CC
Confidence 0000 0134568999999999999999 43
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=339.45 Aligned_cols=207 Identities=25% Similarity=0.325 Sum_probs=175.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+. .+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-----~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA-----QY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----Ce
Confidence 47899999999999999999999999999999986432 33456788999999999999999999999876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~------~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYDT------FSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 8999999999999999976543 88999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCC--------CCCC--------------------------------CcccccccCCcccCcccccCCCCC
Q 001738 861 LAKFLYTCQVDD--------VETP--------------------------------SSSIGIKGTVGYVAPEYGMGSEAS 900 (1019)
Q Consensus 861 ~a~~~~~~~~~~--------~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~ 900 (1019)
+++.+....... .... .......||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 996432110000 0000 000124699999999999998999
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCC
Q 001738 901 MAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 901 ~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
.++||||+||++|||++|..||..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCC
Confidence 999999999999999999999965
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=328.75 Aligned_cols=274 Identities=19% Similarity=0.253 Sum_probs=200.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.++++++||||+++++++... +..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD-----KSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC-----CeEE
Confidence 579999999999999999999988999999999875432 2334677899999999999999999998876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++ ++.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 99999975 88888865432 278899999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+..... ........+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...........
T Consensus 152 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~ 222 (309)
T cd07872 152 RAKSVP-------TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE--DELHLIFRLLG 222 (309)
T ss_pred eecCCC-------ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhC
Confidence 754211 111223467899999998765 46899999999999999999999999754221 11122222111
Q ss_pred cc---hhhccChh-hhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QR---VIEIVDPL-LLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~---~~~~~d~~-l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. ....+... ...... .....+.. ..........++.+++.+|++.||.+|| |++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dp~~R~-t~~e~l~ 285 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYN-FPKYKPQP-LINHAPRLDTEGIELLTKFLQYESKKRI-SAEEAMK 285 (309)
T ss_pred CCCHHHHhhhcchhhhhhhh-cCccCCCc-hhhhccCCCHHHHHHHHHhccCChhhCC-CHHHHhc
Confidence 11 11111100 000000 00000000 0000012344578999999999999999 9999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=317.73 Aligned_cols=255 Identities=30% Similarity=0.453 Sum_probs=202.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.++++++||||+++++++... +..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE-----EPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecC-----CCee
Confidence 357899999999999999999976 567899999875432 346788999999999999999999998766 5689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAG----RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred eeeecccCCcHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 99999999999999976541 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+...... .....+...+..|+|||+..+..++.++||||||+++|||++ |+.||.+... ............
T Consensus 151 ~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~ 222 (261)
T cd05068 151 RVIKEDI------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQVDQGYR 222 (261)
T ss_pred EEccCCc------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCC
Confidence 8764211 111112233568999999998899999999999999999999 9999865321 111111100000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
.|.. ..+...+.+++.+|++.+|.+|| +++++++.|++
T Consensus 223 ---------------------~~~~------~~~~~~~~~li~~~l~~~P~~Rp-~~~~l~~~l~~ 260 (261)
T cd05068 223 ---------------------MPCP------PGCPKELYDIMLDCWKEDPDDRP-TFETLQWKLED 260 (261)
T ss_pred ---------------------CCCC------CcCCHHHHHHHHHHhhcCcccCC-CHHHHHHHHhc
Confidence 0000 11245688999999999999999 99999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=331.77 Aligned_cols=247 Identities=24% Similarity=0.303 Sum_probs=191.9
Q ss_pred CCCCCCceeccccEEEEEEEeC---CCCEEEEEEEeeccc----chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCC
Q 001738 705 EFSTSNMIGQGSFGFVYRGILG---EGGLLVAVKVLNLTR----KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 776 (1019)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+..|+++++++ +||+|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--- 77 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE--- 77 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC---
Confidence 5888999999999999999864 468899999997432 22345678899999999 599999999988766
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEE
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 856 (1019)
...++||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 78 --~~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 78 --AKLHLILDYVSGGEMFTHLYQRDN------FSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 678999999999999999976543 89999999999999999999999 9999999999999999999999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
+|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .....
T Consensus 147 ~DfG~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~ 219 (332)
T cd05614 147 TDFGLSKEFLSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEV 219 (332)
T ss_pred eeCcCCccccccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHH
Confidence 9999997542211 1122345799999999998765 47899999999999999999999996432211 11111
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
...... .++.+ | ......+.+++.+|++.||++|| ++
T Consensus 220 ~~~~~~------~~~~~-----------~--------~~~~~~~~~li~~~l~~dp~~R~-~~ 256 (332)
T cd05614 220 SRRILK------CDPPF-----------P--------SFIGPEAQDLLHKLLRKDPKKRL-GA 256 (332)
T ss_pred HHHHhc------CCCCC-----------C--------CCCCHHHHHHHHHHcCCCHHHcC-CC
Confidence 111100 00000 0 01134568899999999999999 54
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=322.32 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=200.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++... +..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-----~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-----DKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEEEE
Confidence 4788889999999999999999889999999999866555556788999999999999999999998776 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... +++.+++.++.|++.|++|||+. |++|+||||+||+++.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGP------LSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEeccCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 9999999999999876543 89999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
..... ........|+..|+|||++. ...++.++||||+||++|||++|+.||....... .......
T Consensus 155 ~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~~~~~~~--- 223 (267)
T cd06645 155 QITAT-------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMTK--- 223 (267)
T ss_pred EccCc-------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-hHHhhhc---
Confidence 65321 11223457899999999874 4568899999999999999999999986432111 0000000
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. ...+.. .........+.+++.+|++.+|++|| +++++++
T Consensus 224 -~~---~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~P~~R~-~~~~ll~ 264 (267)
T cd06645 224 -SN---FQPPKL-----------------KDKMKWSNSFHHFVKMALTKNPKKRP-TAEKLLQ 264 (267)
T ss_pred -cC---CCCCcc-----------------cccCCCCHHHHHHHHHHccCCchhCc-CHHHHhc
Confidence 00 000000 00001234578999999999999999 9999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=347.85 Aligned_cols=278 Identities=20% Similarity=0.241 Sum_probs=197.8
Q ss_pred HHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCC------CCcceEEEEEe
Q 001738 698 ELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRH------RNLIKIITICS 771 (1019)
Q Consensus 698 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~ 771 (1019)
++....++|++.++||+|+||+||+|.+..+++.||||+++... ........|+++++.++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 33445689999999999999999999998899999999996432 223445667777777654 45888888886
Q ss_pred cCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCC
Q 001738 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDH 850 (1019)
Q Consensus 772 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~ 850 (1019)
... .+.|+|||++ +++|.+++..... +++..+..|+.||+.||+|||+ . |||||||||+|||++.
T Consensus 202 ~~~----~~~~iv~~~~-g~~l~~~l~~~~~------l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 202 NET----GHMCIVMPKY-GPCLLDWIMKHGP------FSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMET 267 (467)
T ss_pred cCC----ceEEEEEecc-CCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEec
Confidence 542 5689999988 7899998876543 8999999999999999999997 6 9999999999999987
Q ss_pred CC----------------CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHH
Q 001738 851 DM----------------VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE 914 (1019)
Q Consensus 851 ~~----------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~e 914 (1019)
++ .+||+|||.+... ........||+.|+|||++.+..|+.++|||||||++||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~----------~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDE----------RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccC----------ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 65 4999999987532 112234678999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCcccHHHHHHH---hCCcchhhccC-hhhhhhhhccCCCCCCCCCC----------ccHHHHHHHHH
Q 001738 915 MFIRKRPTDSMFNDGLTIHEFAMK---ALPQRVIEIVD-PLLLLEVRTNNSKNPCGDGR----------GGIEECLVAVI 980 (1019)
Q Consensus 915 ll~g~~Pf~~~~~~~~~~~~~~~~---~~~~~~~~~~d-~~l~~~~~~~~~~~p~~~~~----------~~~~~~~~~l~ 980 (1019)
|++|+.||+.... ......+.. ..+..+..... .....-+.......|+.... .........+.
T Consensus 338 lltG~~pf~~~~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (467)
T PTZ00284 338 LYTGKLLYDTHDN--LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLC 415 (467)
T ss_pred HHhCCCCCCCCCh--HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHH
Confidence 9999999975322 111111111 11211111000 00000000000111111000 00001134578
Q ss_pred HHHhhccCCCcCchhHhHHHHHH
Q 001738 981 TIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 981 ~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+++.+||++||++|| |++|+++
T Consensus 416 dli~~mL~~dP~~R~-ta~e~L~ 437 (467)
T PTZ00284 416 DLIYGLLHYDRQKRL-NARQMTT 437 (467)
T ss_pred HHHHHhCCcChhhCC-CHHHHhc
Confidence 999999999999999 9999987
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=343.95 Aligned_cols=274 Identities=22% Similarity=0.285 Sum_probs=195.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCC---CCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSID---SHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~~ 779 (1019)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++.... .....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999998899999999885432 23457999999999999999998875432 11124
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-CeEEee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-VAHVGD 858 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~D 858 (1019)
+.++||||++ +++.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 5779999996 478777754321 123489999999999999999999999 999999999999999665 799999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||+|+..... .......||+.|+|||++.+. .++.++||||+||++|||++|.+||.+.... ..+... .
T Consensus 215 FGla~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i-~ 284 (440)
T PTZ00036 215 FGSAKNLLAG--------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRI-I 284 (440)
T ss_pred cccchhccCC--------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHH-H
Confidence 9999865321 122235789999999988764 6899999999999999999999999753221 111111 1
Q ss_pred HhCCcc---hhhccChhhhhhhhccCCCCCCCCCCccH-----HHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQR---VIEIVDPLLLLEVRTNNSKNPCGDGRGGI-----EECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~---~~~~~d~~l~~~~~~~~~~~p~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...... ......+... . ...|.. ..... .....++.+++.+||++||.+|| |+.|+++.
T Consensus 285 ~~~~~p~~~~~~~~~~~~~----~--~~~~~~-~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~-ta~e~l~h 351 (440)
T PTZ00036 285 QVLGTPTEDQLKEMNPNYA----D--IKFPDV-KPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL-NPIEALAD 351 (440)
T ss_pred HHhCCCCHHHHHHhchhhh----c--ccCCcc-CchhHHHHhccCCCHHHHHHHHHHCCCChhHCc-CHHHHhCC
Confidence 111100 0000110000 0 000000 00000 01234678999999999999999 99999853
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=340.53 Aligned_cols=207 Identities=24% Similarity=0.309 Sum_probs=175.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++.+.+. +.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-----~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK-----DN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----CE
Confidence 47999999999999999999999899999999986432 23346688999999999999999999999876 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~~------~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLGI------FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 8999999999999999976543 88899999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCC------------------------------------CCCCCcccccccCCcccCcccccCCCCCCcch
Q 001738 861 LAKFLYTCQVDD------------------------------------VETPSSSIGIKGTVGYVAPEYGMGSEASMAGD 904 (1019)
Q Consensus 861 ~a~~~~~~~~~~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sD 904 (1019)
+|..+....... ...........||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 985321000000 00001112357999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCC
Q 001738 905 VYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 905 vwSlGvil~ell~g~~Pf~~ 924 (1019)
|||+||++|||++|+.||..
T Consensus 227 iwSlGvilyell~G~~Pf~~ 246 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLA 246 (376)
T ss_pred eeeccceeeehhhCCCCCCC
Confidence 99999999999999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=334.61 Aligned_cols=280 Identities=22% Similarity=0.222 Sum_probs=201.9
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-Cc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-GV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 778 (1019)
..++|++.+.||+|+||.||+|++..+|+.||+|++... .......+.+|+.+++.++||||+++++++...... ..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 357899999999999999999999989999999998643 233456778999999999999999999998654321 12
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 357999999965 67666642 178889999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||+++.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........
T Consensus 167 fg~a~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~--~~~~~~~~~ 236 (359)
T cd07876 167 FGLARTACT--------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH--IDQWNKVIE 236 (359)
T ss_pred CCCcccccc--------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 999975321 1122345789999999999999999999999999999999999999975321 111111111
Q ss_pred hCCcchhhccChhh--hhhhhccCCCCCC------------CCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 ALPQRVIEIVDPLL--LLEVRTNNSKNPC------------GDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l--~~~~~~~~~~~p~------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.......+..+... ...+.......+. .............+.+++.+|++.||++|| |++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~-t~~e~l~h 315 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRI-SVDEALRH 315 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCC-CHHHHhcC
Confidence 11111111100000 0000000000000 000000011234578999999999999999 99999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=321.84 Aligned_cols=243 Identities=26% Similarity=0.355 Sum_probs=190.0
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||+|+||+||++.+..+++.||+|++.... ....+.+..|++++++++||||+++.+++... ...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK-----TDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC-----CeEEEEEeCC
Confidence 699999999999999899999999986432 22335677899999999999999999988765 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++|+|.+++..... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 99999988754322 123489999999999999999999999 9999999999999999999999999999765321
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...+.........
T Consensus 151 ~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~----- 217 (280)
T cd05608 151 Q-------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDS----- 217 (280)
T ss_pred C-------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccC-----
Confidence 1 11223578999999999999999999999999999999999999997532211 1111111110000
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
. ..| ......+.+++.+||+.||++|| ++
T Consensus 218 ---~---------~~~--------~~~~~~~~~li~~~l~~~P~~R~-~~ 246 (280)
T cd05608 218 ---V---------TYP--------DKFSPASKSFCEALLAKDPEKRL-GF 246 (280)
T ss_pred ---C---------CCc--------ccCCHHHHHHHHHHhcCCHHHhc-CC
Confidence 0 000 11244578999999999999999 54
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=325.39 Aligned_cols=263 Identities=29% Similarity=0.418 Sum_probs=202.1
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCE--EEEEEEeecc-cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGL--LVAVKVLNLT-RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 778 (1019)
.++|++.+.||+|+||.||+|++..++. .+|+|.++.. .....+.+.+|++++.++ +||||+++++++.+.
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~----- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----- 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC-----
Confidence 3578999999999999999999877775 4577776532 233456788999999999 899999999998776
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
+..|+||||+++++|.++++..... .....+++..++.++.|++.|++|||++ ||+||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 6789999999999999999765321 1123489999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFN 927 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~ 927 (1019)
+.++.+||+|||++..... ........++..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 229 (303)
T cd05088 158 GENYVAKIADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229 (303)
T ss_pred cCCCcEEeCccccCcccch--------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh
Confidence 9999999999999863211 001111234677999999988889999999999999999998 9999864321
Q ss_pred CcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
. +.... .+... .. ..| ......+.+++.+||+.+|++|| +++++++.+.+
T Consensus 230 ~-----~~~~~-~~~~~----~~-----------~~~--------~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~~l~~ 279 (303)
T cd05088 230 A-----ELYEK-LPQGY----RL-----------EKP--------LNCDDEVYDLMRQCWREKPYERP-SFAQILVSLNR 279 (303)
T ss_pred H-----HHHHH-HhcCC----cC-----------CCC--------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 1 11111 10000 00 000 01234578999999999999999 99999999988
Q ss_pred HHHh
Q 001738 1008 AREA 1011 (1019)
Q Consensus 1008 i~~~ 1011 (1019)
+.+.
T Consensus 280 ~~~~ 283 (303)
T cd05088 280 MLEE 283 (303)
T ss_pred HHHh
Confidence 7543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=315.97 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=207.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch--hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG--AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
..+=|...+.||+|.|+.|-+|++.-+|+.||||++.+..-+ ....+.+|++.|+.++|||||++|.+..++ .
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-----T 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-----T 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-----c
Confidence 346789999999999999999999999999999999865432 346788999999999999999999999887 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe-CCCCCeEEee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL-DHDMVAHVGD 858 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kL~D 858 (1019)
..|+|+|.-++|+|++|+-.+..+ +.+....+++.||+.|+.|+|.. .+||||+||+||.+ ..-|-|||+|
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~G-----l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTD 162 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEG-----LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTD 162 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhcc-----ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeee
Confidence 789999999999999999876542 89999999999999999999999 99999999999886 4568999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEAS-MAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||++..+. +.......+|+..|-|||++.|..|+ ++.||||+|||+|-+++|++||+...+.+ .
T Consensus 163 FGFSNkf~--------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-T------ 227 (864)
T KOG4717|consen 163 FGFSNKFQ--------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-T------ 227 (864)
T ss_pred ccccccCC--------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-h------
Confidence 99997653 33344567999999999999999885 57899999999999999999998643321 1
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
+..++|-... .| .-...++.++|..|+..||++|. +.+||+..
T Consensus 228 ------LTmImDCKYt---------vP--------shvS~eCrdLI~sMLvRdPkkRA-slEeI~s~ 270 (864)
T KOG4717|consen 228 ------LTMIMDCKYT---------VP--------SHVSKECRDLIQSMLVRDPKKRA-SLEEIVST 270 (864)
T ss_pred ------hhhhhccccc---------Cc--------hhhhHHHHHHHHHHHhcCchhhc-cHHHHhcc
Confidence 1222221110 00 11245568999999999999999 99998753
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=323.94 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=202.6
Q ss_pred CCCCCCCceeccccEEEEEEEe-----CCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 776 (1019)
++|.+.+.||+|+||.||+|.+ ..++..||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--- 111 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG--- 111 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC---
Confidence 4799999999999999999975 3346689999987543 33456788999999999 799999999998766
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEE
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 856 (1019)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||++ +|+|+||||+||+++.++.+|+
T Consensus 112 --~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 112 --GPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred --CceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEE
Confidence 568999999999999999976442 2289999999999999999999999 9999999999999999999999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~ 935 (1019)
+|||+++...... .........++..|+|||.+.+..++.++||||+||++|||++ |..||....... ...+.
T Consensus 183 ~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~ 256 (302)
T cd05055 183 CDFGLARDIMNDS-----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKL 256 (302)
T ss_pred CCCcccccccCCC-----ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHH
Confidence 9999997543211 0011122345788999999998899999999999999999998 999986532211 11111
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
... . . .+.. . .....++.+++.+|++.+|++|| |++|+++.|+++
T Consensus 257 ~~~----~--------~----------~~~~--~---~~~~~~~~~li~~cl~~~p~~Rp-t~~ell~~l~~~ 301 (302)
T cd05055 257 IKE----G--------Y----------RMAQ--P---EHAPAEIYDIMKTCWDADPLKRP-TFKQIVQLIGKQ 301 (302)
T ss_pred HHc----C--------C----------cCCC--C---CCCCHHHHHHHHHHcCCCchhCc-CHHHHHHHHHhh
Confidence 000 0 0 0000 0 01134578999999999999999 999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=329.66 Aligned_cols=238 Identities=29% Similarity=0.319 Sum_probs=187.6
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHH-HHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECE-ALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+|+.||+|++.... ....+++..|.. +++.++||||+++++++... +..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~-----~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA-----DKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC-----CEEEEEE
Confidence 46999999999999999999999999997432 222344555554 56788999999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRERS------FPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 99999999999876543 89999999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~- 213 (323)
T cd05575 147 IE-------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILNKPL- 213 (323)
T ss_pred cc-------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCCC-
Confidence 11 1122234578999999999999899999999999999999999999997531 1111111110000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
.+ .| .....+.+++.+|++.||++|| ++.
T Consensus 214 -----~~----------~~---------~~~~~~~~li~~~l~~~p~~R~-~~~ 242 (323)
T cd05575 214 -----RL----------KP---------NISVSARHLLEGLLQKDRTKRL-GAK 242 (323)
T ss_pred -----CC----------CC---------CCCHHHHHHHHHHhhcCHHhCC-CCC
Confidence 00 00 0134578999999999999999 874
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=320.44 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=202.6
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCC-c
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHG-V 778 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-~ 778 (1019)
.+.+.|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+|+.+++++ +|||++++++++......+ .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 356789999999999999999999998999999999975433 346788999999998 6999999999987654322 2
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 468999999999999999986432 2388999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~ 933 (1019)
||++...... ........|++.|+|||++. +..++.++||||+||++|||++|+.||...... .
T Consensus 155 fg~~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~ 223 (272)
T cd06637 155 FGVSAQLDRT-------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----R 223 (272)
T ss_pred CCCceecccc-------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----H
Confidence 9999754221 11223456899999999876 345888999999999999999999999643211 0
Q ss_pred HHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 934 EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 934 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. ............ ...+...+.+++.+||..+|.+|| |++|+++
T Consensus 224 ~~-~~~~~~~~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rp-t~~~il~ 268 (272)
T cd06637 224 AL-FLIPRNPAPRLK-----------------------SKKWSKKFQSFIESCLVKNHSQRP-TTEQLMK 268 (272)
T ss_pred HH-HHHhcCCCCCCC-----------------------CCCcCHHHHHHHHHHcCCChhhCC-CHHHHhh
Confidence 00 000000000000 011234578999999999999999 9999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=325.35 Aligned_cols=265 Identities=24% Similarity=0.366 Sum_probs=205.3
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCC-----CEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEG-----GLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSID 774 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 774 (1019)
..++|++.+.||+|+||.||+|.+... ...||+|.+.... .....++.+|+++++++ +||||+++++++...
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~- 88 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE- 88 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC-
Confidence 346789999999999999999987633 3789999987542 23446688999999999 799999999998765
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCC
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPS 844 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 844 (1019)
...++||||+++|+|.++++..... .....+++..++.++.|++.|++|||+. +|+||||||+
T Consensus 89 ----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~ 161 (293)
T cd05053 89 ----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAAR 161 (293)
T ss_pred ----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccccccccee
Confidence 5689999999999999999754210 1233589999999999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCC
Q 001738 845 NVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTD 923 (1019)
Q Consensus 845 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~ 923 (1019)
||+++.++.+||+|||.++....... ........++..|+|||+..+..++.++|||||||++||+++ |..||.
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDY-----YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccc-----eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 99999999999999999986533221 111122335678999999988889999999999999999997 999986
Q ss_pred CCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 924 SMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... ........ .. .+.. ...+...+.+++.+||+.||++|| |++|+++
T Consensus 237 ~~~~~--~~~~~~~~---~~-------------------~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp-s~~eil~ 286 (293)
T cd05053 237 GIPVE--ELFKLLKE---GY-------------------RMEK-----PQNCTQELYHLMRDCWHEVPSQRP-TFKQLVE 286 (293)
T ss_pred CCCHH--HHHHHHHc---CC-------------------cCCC-----CCCCCHHHHHHHHHHcccCcccCc-CHHHHHH
Confidence 53211 11110000 00 0000 011245678999999999999999 9999999
Q ss_pred HHHHHH
Q 001738 1004 KLCAAR 1009 (1019)
Q Consensus 1004 ~L~~i~ 1009 (1019)
.|+++.
T Consensus 287 ~l~~~~ 292 (293)
T cd05053 287 DLDRML 292 (293)
T ss_pred HHHHhh
Confidence 998875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=317.94 Aligned_cols=251 Identities=26% Similarity=0.416 Sum_probs=198.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||+||+|++. ++..||+|.++... ...+.+.+|+.++++++||||+++++++... +..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CCcEE
Confidence 46889999999999999999886 45579999887433 2346789999999999999999999998765 55799
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... .+++..++.++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 9999999999999976432 389999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ........++..|+|||...+..++.++|||||||++|||++ |..||...... ...........
T Consensus 149 ~~~~~~------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~- 219 (256)
T cd05113 149 YVLDDE------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQGLR- 219 (256)
T ss_pred ecCCCc------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcCCC-
Confidence 653211 111122345678999999988889999999999999999998 99998643211 11111100000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
+... ......+.+++.+||+.+|.+|| +++++++.+
T Consensus 220 ---------------------~~~~-----~~~~~~~~~li~~cl~~~p~~Rp-~~~~ll~~~ 255 (256)
T cd05113 220 ---------------------LYRP-----HLASEKVYAIMYSCWHEKAEERP-TFQQLLSSI 255 (256)
T ss_pred ---------------------CCCC-----CCCCHHHHHHHHHHcCCCcccCC-CHHHHHHhh
Confidence 0000 01145679999999999999999 999999876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=320.35 Aligned_cols=260 Identities=26% Similarity=0.427 Sum_probs=203.2
Q ss_pred CCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|...++||+|+||.||+|... .++..+|+|.++.......+.+.+|++++++++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG----- 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC-----
Confidence 46788999999999999999742 35678999998766666667899999999999999999999998776
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCC---------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQ---------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 849 (1019)
...++||||+++++|.+++...... .....+++..++.++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 5679999999999999999765421 1113488999999999999999999999 999999999999999
Q ss_pred CCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCC
Q 001738 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFND 928 (1019)
Q Consensus 850 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~ 928 (1019)
+++.+||+|||++....... .........+++.|+|||...+..++.++|||||||++|||++ |.+||......
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 231 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTD-----YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT 231 (280)
T ss_pred CCCCEEECCCCceeEcCCCc-----eeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH
Confidence 99999999999997543211 1111122345788999999998899999999999999999998 89998643211
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
...+......+. ..| ..+...+.+++.+||+.||.+|| +++||++.|+
T Consensus 232 --~~~~~~~~~~~~-------------------~~~--------~~~~~~~~~li~~cl~~~P~~Rp-~~~~l~~~l~ 279 (280)
T cd05092 232 --EAIECITQGREL-------------------ERP--------RTCPPEVYAIMQGCWQREPQQRM-VIKDIHSRLQ 279 (280)
T ss_pred --HHHHHHHcCccC-------------------CCC--------CCCCHHHHHHHHHHccCChhhCC-CHHHHHHHHh
Confidence 111110000000 000 11245578999999999999999 9999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=321.60 Aligned_cols=263 Identities=23% Similarity=0.350 Sum_probs=203.2
Q ss_pred CCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
+|.+.+.||+|+||.||+|+... ....+|+|.+..... ...+++.+|+.+++.++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----- 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----
Confidence 47888999999999999998742 235799998865432 3356788999999999999999999998765
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCC------------------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQ------------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGD 840 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 840 (1019)
+..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+. +|+|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 5679999999999999998753211 1123488999999999999999999999 999999
Q ss_pred cCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CC
Q 001738 841 LKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RK 919 (1019)
Q Consensus 841 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~ 919 (1019)
|||+||++++++.+||+|||+++...... .........++..|+|||+..+..++.++||||||+++|||++ |.
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEED-----SYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCcc-----chhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997543221 1111122345778999999988889999999999999999998 99
Q ss_pred CCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 920 RPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 920 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
.||..... ....+..... .. .+. ...+...+.+++.+||+.+|++|| +++
T Consensus 228 ~p~~~~~~--~~~~~~~~~~------------~~---------~~~------~~~~~~~~~~~i~~cl~~~P~~Rp-~~~ 277 (290)
T cd05045 228 NPYPGIAP--ERLFNLLKTG------------YR---------MER------PENCSEEMYNLMLTCWKQEPDKRP-TFA 277 (290)
T ss_pred CCCCCCCH--HHHHHHHhCC------------CC---------CCC------CCCCCHHHHHHHHHHccCCcccCC-CHH
Confidence 99865321 1111111100 00 000 011234678999999999999999 999
Q ss_pred HHHHHHHHHHH
Q 001738 1000 NVVAKLCAARE 1010 (1019)
Q Consensus 1000 evl~~L~~i~~ 1010 (1019)
|+++.|+++..
T Consensus 278 ~i~~~l~~~~~ 288 (290)
T cd05045 278 DISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=326.48 Aligned_cols=273 Identities=20% Similarity=0.276 Sum_probs=204.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||+|+||.||+|.+..++..||+|.++... .....++.+|++++++++||||+++++++... ++.+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-----GEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CEEE
Confidence 36899999999999999999999899999999987543 33346688999999999999999999999876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.++++.... +++..+..++.|+++||+|||+.. +++||||||+||+++.++.+||+|||.+
T Consensus 76 lv~ey~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAGR------IPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEeeccCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence 99999999999999976543 889999999999999999999732 8999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ......|+..|+|||...+..++.++|||||||++|||++|+.||..... ....... .....
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~-~~~~~ 215 (308)
T cd06615 148 GQLIDS---------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMF-GRPVS 215 (308)
T ss_pred cccccc---------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhh-cCccc
Confidence 754211 12235688999999999888899999999999999999999999864321 1111111 10000
Q ss_pred chhhccC-----------hh---hhhhhhc-cCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 943 RVIEIVD-----------PL---LLLEVRT-NNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 943 ~~~~~~d-----------~~---l~~~~~~-~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
....... +. .....+. .....|.. ........+.+++.+||+.+|++|| |++||++.-.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rp-t~~~ll~~~~ 289 (308)
T cd06615 216 EGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKL----PSGAFSDEFQDFVDKCLKKNPKERA-DLKELTKHPF 289 (308)
T ss_pred cccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccC----cCcccCHHHHHHHHHHccCChhhCc-CHHHHhcChh
Confidence 0000000 00 0000000 00000100 0011345688999999999999999 9999988743
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=320.89 Aligned_cols=261 Identities=26% Similarity=0.403 Sum_probs=202.1
Q ss_pred hCCCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 776 (1019)
.++|.+.+.||+|+||.||+|.+.. .+..||+|.+.... ......+.+|+.++++++|+||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--- 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 4678999999999999999999976 67889999886443 33345688999999999999999999988765
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCC-CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC---
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQ-HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM--- 852 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 852 (1019)
...++||||+++++|.+++...... .....+++..++.++.||+.|++|||++ +++||||||+||+++.++
T Consensus 82 --~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 82 --LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred --CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCc
Confidence 5578999999999999999776431 1223589999999999999999999999 999999999999998654
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCccc
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLT 931 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~ 931 (1019)
.+||+|||+++....... .........+..|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 157 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~ 229 (277)
T cd05036 157 VAKIADFGMARDIYRASY-----YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--E 229 (277)
T ss_pred ceEeccCccccccCCccc-----eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 699999999986522211 111112233568999999998899999999999999999997 99998753221 1
Q ss_pred HHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 932 IHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 932 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
..+....... . ..| ..+...+.+++.+|++.+|++|| |+++|++.|.
T Consensus 230 ~~~~~~~~~~------------~-------~~~--------~~~~~~~~~~i~~cl~~~p~~Rp-s~~~vl~~l~ 276 (277)
T cd05036 230 VMEFVTGGGR------------L-------DPP--------KGCPGPVYRIMTDCWQHTPEDRP-NFATILERIQ 276 (277)
T ss_pred HHHHHHcCCc------------C-------CCC--------CCCCHHHHHHHHHHcCCCcccCc-CHHHHHHHhh
Confidence 1111110000 0 000 11245678999999999999999 9999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=330.20 Aligned_cols=241 Identities=26% Similarity=0.285 Sum_probs=188.0
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHH-HHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECE-ALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++... +..|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-----DKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC-----CeEEEEE
Confidence 46999999999999999899999999997432 122234444444 56788999999999998876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++..... +++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~~------~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRERC------FLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999999976543 78889999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+..........
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~- 213 (325)
T cd05602 147 IE-------HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILNKPL- 213 (325)
T ss_pred cc-------CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHHhCCc-
Confidence 21 11122345799999999999999999999999999999999999999965221 111111100000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
.+.+ .....+.+++.+|++.||.+|| ++.+.+
T Consensus 214 -~~~~-----------------------~~~~~~~~li~~~l~~~p~~R~-~~~~~~ 245 (325)
T cd05602 214 -QLKP-----------------------NITNSARHLLEGLLQKDRTKRL-GAKDDF 245 (325)
T ss_pred -CCCC-----------------------CCCHHHHHHHHHHcccCHHHCC-CCCCCH
Confidence 0000 1134578999999999999999 876443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=332.37 Aligned_cols=266 Identities=22% Similarity=0.321 Sum_probs=204.5
Q ss_pred hhCCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIR-HRNLIKIITICSSID 774 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 774 (1019)
..++|.+.+.||+|+||.||+|++. ..++.||+|+++... ....+.+.+|++++.++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~- 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG- 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC-
Confidence 3456888999999999999999864 345789999997543 233457889999999997 99999999999776
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCC---------------------------------------------------
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQ--------------------------------------------------- 803 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 803 (1019)
...++||||+++|+|.++++.....
T Consensus 114 ----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 114 ----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred ----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 5689999999999999999754310
Q ss_pred -----------------------------------------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccC
Q 001738 804 -----------------------------------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842 (1019)
Q Consensus 804 -----------------------------------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 842 (1019)
.....+++..+..++.|++.||+|||+. +|+|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 0112477888999999999999999999 99999999
Q ss_pred CCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCC
Q 001738 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRP 921 (1019)
Q Consensus 843 p~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~P 921 (1019)
|+||+++.++.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.|
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P 341 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSN-----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccc-----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999986432110 011122356789999999998889999999999999999998 8899
Q ss_pred CCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHH
Q 001738 922 TDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNV 1001 (1019)
Q Consensus 922 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ev 1001 (1019)
|......+. ..+...... .+ ..| ..+..++.+++.+||+.+|.+|| +++||
T Consensus 342 ~~~~~~~~~-~~~~~~~~~--------~~-----------~~p--------~~~~~~l~~li~~cl~~~P~~RP-s~~el 392 (401)
T cd05107 342 YPELPMNEQ-FYNAIKRGY--------RM-----------AKP--------AHASDEIYEIMQKCWEEKFEIRP-DFSQL 392 (401)
T ss_pred CCCCCchHH-HHHHHHcCC--------CC-----------CCC--------CCCCHHHHHHHHHHcCCChhHCc-CHHHH
Confidence 865322110 111100000 00 000 01245678999999999999999 99999
Q ss_pred HHHHHHHH
Q 001738 1002 VAKLCAAR 1009 (1019)
Q Consensus 1002 l~~L~~i~ 1009 (1019)
++.|+.+.
T Consensus 393 l~~L~~~~ 400 (401)
T cd05107 393 VHLVGDLL 400 (401)
T ss_pred HHHHHHHh
Confidence 99998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=333.84 Aligned_cols=253 Identities=21% Similarity=0.248 Sum_probs=199.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++... ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~-----~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK-----DN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC-----Ce
Confidence 36899999999999999999999999999999997542 23456688999999999999999999988775 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 8999999999999999987532 389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCccccc------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM------GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~ 934 (1019)
++....... ........||+.|+|||++. +..++.++|||||||++|||++|+.||..... .+
T Consensus 148 ~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~ 216 (330)
T cd05601 148 SAARLTANK------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AK 216 (330)
T ss_pred CCeECCCCC------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HH
Confidence 998653221 11122346899999999986 45678999999999999999999999965321 11
Q ss_pred HHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 935 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
......... ... ..|.. ......+.+++..|++ +|.+|| +++++++
T Consensus 217 ~~~~i~~~~--~~~-------------~~~~~------~~~~~~~~~li~~ll~-~p~~R~-t~~~l~~ 262 (330)
T cd05601 217 TYNNIMNFQ--RFL-------------KFPED------PKVSSDFLDLIQSLLC-GQKERL-GYEGLCC 262 (330)
T ss_pred HHHHHHcCC--Ccc-------------CCCCC------CCCCHHHHHHHHHHcc-ChhhCC-CHHHHhC
Confidence 111111000 000 00000 0123456888899997 999999 9999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=324.93 Aligned_cols=251 Identities=23% Similarity=0.270 Sum_probs=203.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|||++++++++... ...+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CEEE
Confidence 46899999999999999999999889999999999766555557788999999999999999999999876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++.... +++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EeecccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999987543 78999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......+++.|+|||...+..++.++||||+||++|++++|+.||........... . .. .
T Consensus 163 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~-~~---~ 230 (297)
T cd06656 163 AQITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-I-AT---N 230 (297)
T ss_pred eEccCCc-------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-e-cc---C
Confidence 7543211 111234678999999999988899999999999999999999999964221100000 0 00 0
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..|.... .......+.+++.+||+.+|++|| +++|+++
T Consensus 231 -------------------~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp-s~~~il~ 268 (297)
T cd06656 231 -------------------GTPELQN---PERLSAVFRDFLNRCLEMDVDRRG-SAKELLQ 268 (297)
T ss_pred -------------------CCCCCCC---ccccCHHHHHHHHHHccCChhhCc-CHHHHhc
Confidence 0000000 011234578899999999999999 9999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=320.52 Aligned_cols=252 Identities=25% Similarity=0.340 Sum_probs=198.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++|++++++++.+.+. +..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-----CEE
Confidence 3777889999999999999999999999999986432 22234567899999999999999999998776 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999865432 2389999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... ..+......
T Consensus 149 ~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~~- 217 (285)
T cd05630 149 AVHVPEGQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLV- 217 (285)
T ss_pred eeecCCCc--------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhhh-
Confidence 87542111 1123468999999999998899999999999999999999999997532211 001111000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-----HHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE-----MRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s-----~~evl~ 1003 (1019)
........ ......+.+++.+||+.||++|| | ++|+++
T Consensus 218 ~~~~~~~~-----------------------~~~~~~~~~li~~~l~~~p~~R~-s~~~~~~~~~~~ 260 (285)
T cd05630 218 KEVQEEYS-----------------------EKFSPDARSLCKMLLCKDPKERL-GCQGGGAREVKE 260 (285)
T ss_pred hhhhhhcC-----------------------ccCCHHHHHHHHHHhhcCHHHcc-CCCCCchHHHHc
Confidence 00000000 01234568999999999999999 9 888877
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=327.16 Aligned_cols=242 Identities=24% Similarity=0.295 Sum_probs=192.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcce
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 780 (1019)
+|+..+.||+|+||+||+|++..+|+.||+|+++... ....+.+..|..+++.+. |++|+++++++.+. +.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV-----DR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----CE
Confidence 4778899999999999999999899999999997432 233456778899988885 57788888888776 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++.+++.++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~~------l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVGK------FKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 8999999999999999976543 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+....
T Consensus 147 ~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i~~-- 215 (323)
T cd05615 147 MCKEHMVD-------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DELFQSIME-- 215 (323)
T ss_pred cccccCCC-------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHh--
Confidence 98743211 1112335689999999999988999999999999999999999999975321 111111110
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
.. . ..|. .....+.+++.+|++.+|.+|+ +.
T Consensus 216 -~~------------~-----~~p~--------~~~~~~~~li~~~l~~~p~~R~-~~ 246 (323)
T cd05615 216 -HN------------V-----SYPK--------SLSKEAVSICKGLMTKHPSKRL-GC 246 (323)
T ss_pred -CC------------C-----CCCc--------cCCHHHHHHHHHHcccCHhhCC-CC
Confidence 00 0 0010 1133568899999999999999 64
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=315.16 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=193.7
Q ss_pred ceeccccEEEEEEEe--CCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 711 MIGQGSFGFVYRGIL--GEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
.||+|+||.||+|.+ ..++..||+|+++... ....+++.+|+.++++++||||+++++++.. +..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 689999999999965 4567899999986443 2345678999999999999999999998753 34689999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++++|.+++..... +++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKNKH------VTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999999999976442 89999999999999999999999 99999999999999999999999999997653
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.... .........++..|+|||......++.++|||||||++|||++ |..||..... ....+.... ....
T Consensus 147 ~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~~---~~~~ 217 (257)
T cd05116 147 ADEN----YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIES---GERM 217 (257)
T ss_pred CCCC----eeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHC---CCCC
Confidence 2211 0111122344678999999988889999999999999999998 9999975321 111111110 0000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
+ .| ..+...+.+++.+||+.||++|| ++++|.+.|+.
T Consensus 218 ~----------------~~--------~~~~~~l~~li~~~~~~~p~~Rp-~~~~i~~~l~~ 254 (257)
T cd05116 218 E----------------CP--------QRCPPEMYDLMKLCWTYGVDERP-GFAVVELRLRN 254 (257)
T ss_pred C----------------CC--------CCCCHHHHHHHHHHhccCchhCc-CHHHHHHHHhc
Confidence 0 00 01245578999999999999999 99999998864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=323.82 Aligned_cols=267 Identities=24% Similarity=0.367 Sum_probs=200.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCC--------------CEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEG--------------GLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIIT 768 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~--------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~ 768 (1019)
++|++.+.||+|+||.||+|++... ...||+|+++.. .......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5899999999999999999987532 235899998754 2334567899999999999999999999
Q ss_pred EEecCCCCCcceEEEEEeeccCCCHHHHHhccCCC------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccC
Q 001738 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQ------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842 (1019)
Q Consensus 769 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 842 (1019)
++... ...++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +++|||||
T Consensus 85 ~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEcCC-----CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 98765 6689999999999999998654210 1112378899999999999999999999 99999999
Q ss_pred CCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh--CCC
Q 001738 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI--RKR 920 (1019)
Q Consensus 843 p~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~--g~~ 920 (1019)
|+||+++.++.+||+|||++....... .........++..|+|||+..+..++.++|||||||++|||++ |..
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~ 231 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGD-----YYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQ 231 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCc-----ceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999997543211 1111222345778999999988889999999999999999998 566
Q ss_pred CCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHH
Q 001738 921 PTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN 1000 (1019)
Q Consensus 921 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~e 1000 (1019)
||..... ........+........... .. . ..++..+.+++.+||+.||++|| |+++
T Consensus 232 p~~~~~~--~~~~~~~~~~~~~~~~~~~~---------------~~--~---~~~~~~l~~li~~~l~~~p~~RP-s~~~ 288 (295)
T cd05097 232 PYSLLSD--EQVIENTGEFFRNQGRQIYL---------------SQ--T---PLCPSPVFKLMMRCWSRDIKDRP-TFNK 288 (295)
T ss_pred CCcccCh--HHHHHHHHHhhhhccccccC---------------CC--C---CCCCHHHHHHHHHHcCCCchhCc-CHHH
Confidence 7754221 11111111100000000000 00 0 01235689999999999999999 9999
Q ss_pred HHHHHH
Q 001738 1001 VVAKLC 1006 (1019)
Q Consensus 1001 vl~~L~ 1006 (1019)
|++.|+
T Consensus 289 i~~~l~ 294 (295)
T cd05097 289 IHHFLR 294 (295)
T ss_pred HHHHHh
Confidence 999886
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=333.60 Aligned_cols=206 Identities=21% Similarity=0.306 Sum_probs=176.5
Q ss_pred HHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCC
Q 001738 698 ELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSID 774 (1019)
Q Consensus 698 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 774 (1019)
++....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~- 115 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD- 115 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-
Confidence 3444567999999999999999999999999999999998642 222345578899999999999999999998776
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
.+.++||||+++|+|.++++... +++..+..++.||+.||+|||++ +|+||||||+||+++.++++
T Consensus 116 ----~~~~lv~Ey~~gg~L~~~~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 116 ----RYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred ----CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCE
Confidence 67899999999999999997543 78889999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS----EASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
||+|||+++...... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 182 kL~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 182 KLADFGTCMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred EEEeCCceeEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999998653211 1112345799999999998653 378999999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=316.00 Aligned_cols=251 Identities=19% Similarity=0.273 Sum_probs=202.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
+|++.+.||+|+||.||++.+..+++.||+|.++.. .....+.+.+|+.++++++|||++++++++.+. +..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD-----GHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-----CEEEE
Confidence 578899999999999999999989999999998643 333456788999999999999999999998876 78899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... ..+++..++.++.|++.||+|||++ +|+|+||||+||+++.++.++++|||.+.
T Consensus 76 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 9999999999999875432 2378999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
...... .......|++.|+|||+..+..++.++||||+|+++|+|++|..||.... ............
T Consensus 149 ~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~~ 216 (255)
T cd08219 149 LLTSPG-------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQGS 216 (255)
T ss_pred eecccc-------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcCC
Confidence 653211 11223568899999999998889999999999999999999999996421 111111111000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
... +. ......+.+++.+||+.||++|| |+.|++..
T Consensus 217 ~~~-~~-----------------------~~~~~~~~~li~~~l~~~P~~Rp-~~~~il~~ 252 (255)
T cd08219 217 YKP-LP-----------------------SHYSYELRSLIKQMFKRNPRSRP-SATTILSR 252 (255)
T ss_pred CCC-CC-----------------------cccCHHHHHHHHHHHhCCcccCC-CHHHHhhc
Confidence 000 00 11234578999999999999999 99999764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=315.33 Aligned_cols=251 Identities=31% Similarity=0.461 Sum_probs=197.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|++.+.||+|+||.||+|+++ ++..+|+|++..... ....+.+|++++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ-----RPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-----CceEE
Confidence 35889999999999999999986 567899999864322 235688899999999999999999998765 56899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 9999999999999976432 389999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ........++..|+|||...+..++.++||||||+++|||++ |+.||...... ...+.....
T Consensus 149 ~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~--- 217 (256)
T cd05059 149 YVLDDQ------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAG--- 217 (256)
T ss_pred eccccc------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHcC---
Confidence 653211 011112234567999999998899999999999999999999 88998653211 111111000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
... ..| ..+..++.+++.+||+.+|++|| |++|+++.|
T Consensus 218 -----~~~-----------~~~--------~~~~~~~~~li~~cl~~~p~~Rp-t~~~~l~~l 255 (256)
T cd05059 218 -----YRL-----------YRP--------KLAPTEVYTIMYSCWHEKPEDRP-AFKKLLSQL 255 (256)
T ss_pred -----CcC-----------CCC--------CCCCHHHHHHHHHHhcCChhhCc-CHHHHHHHh
Confidence 000 000 01245689999999999999999 999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=332.83 Aligned_cols=278 Identities=21% Similarity=0.206 Sum_probs=202.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-Cc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-GV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 778 (1019)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++...... ..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999999889999999998643 233346778899999999999999999988654321 22
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||+++ ++.+.+... +++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~~--------l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~D 162 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 162 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEee
Confidence 457999999965 677766431 78889999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .........
T Consensus 163 fg~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~ 232 (355)
T cd07874 163 FGLARTAGT--------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIE 232 (355)
T ss_pred CcccccCCC--------ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 999975421 1122345789999999999998999999999999999999999999975321 111111111
Q ss_pred hCCcc---hhhccChhhhhhhhcc-------------CCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 939 ALPQR---VIEIVDPLLLLEVRTN-------------NSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 939 ~~~~~---~~~~~d~~l~~~~~~~-------------~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
..... ......+......... ....|+. ..........+.+++.+|++.||++|| |++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~mL~~dP~~Rp-s~~ell 309 (355)
T cd07874 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPAD--SEHNKLKASQARDLLSKMLVIDPAKRI-SVDEAL 309 (355)
T ss_pred HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccc--cccccccchHHHHHHHHHhcCCchhcC-CHHHHh
Confidence 11110 0011111100000000 0000000 000011234678999999999999999 999998
Q ss_pred HH
Q 001738 1003 AK 1004 (1019)
Q Consensus 1003 ~~ 1004 (1019)
+.
T Consensus 310 ~h 311 (355)
T cd07874 310 QH 311 (355)
T ss_pred cC
Confidence 85
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=313.70 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=196.7
Q ss_pred CceeccccEEEEEEEeCCCC---EEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGG---LLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
++||+|+||.||+|.+...+ ..||+|.+..... ...+++.+|+++++++.|||++++++++.. +..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 47999999999999875444 7899999875543 345678899999999999999999998753 4578999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++..... +++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKRRE------IPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhCCC------CCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 99999999999986542 89999999999999999999999 9999999999999999999999999999865
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
..... .........++..|+|||...+..++.++|||||||++|||++ |..||..... ...........+
T Consensus 146 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~--- 216 (257)
T cd05060 146 GAGSD----YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER--- 216 (257)
T ss_pred ecCCc----ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc---
Confidence 32211 1111112234568999999988899999999999999999998 9999865321 111111111000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.+.. ..+...+.+++.+||+.+|++|| ++.++++.|+++
T Consensus 217 ------------------~~~~------~~~~~~l~~li~~cl~~~p~~Rp-~~~~l~~~l~~~ 255 (257)
T cd05060 217 ------------------LPRP------EECPQEIYSIMLSCWKYRPEDRP-TFSELESTFRRD 255 (257)
T ss_pred ------------------CCCC------CCCCHHHHHHHHHHhcCChhhCc-CHHHHHHHHHhc
Confidence 0000 11245678999999999999999 999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=314.83 Aligned_cols=250 Identities=29% Similarity=0.372 Sum_probs=198.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|++.+.||+|+||.||+|... |..||+|.++... ..+.+.+|+.++++++|++++++++++...+ ...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC----CceEE
Confidence 47889999999999999999874 7889999986432 3467889999999999999999999765432 45799
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.++++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred EEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccce
Confidence 9999999999999976542 2378999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
..... .....++..|+|||+..+..++.++|||||||++|||++ |+.||..... ...........+.
T Consensus 151 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~ 218 (256)
T cd05082 151 EASST----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKM 218 (256)
T ss_pred ecccc----------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCC
Confidence 54211 112234678999999988889999999999999999997 9999864211 1111111100000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
. ....+...+.+++.+||+.+|++|| |++++++.|+.+
T Consensus 219 ~---------------------------~~~~~~~~~~~li~~~l~~~p~~Rp-t~~~l~~~l~~~ 256 (256)
T cd05082 219 D---------------------------APDGCPPVVYDVMKQCWHLDAATRP-SFLQLREQLEHI 256 (256)
T ss_pred C---------------------------CCCCCCHHHHHHHHHHhcCChhhCc-CHHHHHHHHhcC
Confidence 0 0012245678999999999999999 999999998764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=330.58 Aligned_cols=239 Identities=25% Similarity=0.308 Sum_probs=190.1
Q ss_pred CceeccccEEEEEEEe---CCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
+.||+|+||.||++++ ..+|+.||+|+++.... .....+.+|++++++++||||+++++++... ...|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE-----GKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----CEEEEE
Confidence 5799999999999876 35789999999975432 2335577899999999999999999998876 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
|||+++|+|.+++..... +++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKEVM------FTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 999999999999976442 89999999999999999999999 999999999999999999999999999875
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
.... ........|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 148 ~~~~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~i~~~~~ 215 (318)
T cd05582 148 SIDH-------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTMILKAKL 215 (318)
T ss_pred cCCC-------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHHHHcCCC
Confidence 4221 1122345789999999999988899999999999999999999999965311 111111100000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN 1000 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~e 1000 (1019)
..| ......+.+++.+||+.||++|| ++.+
T Consensus 216 -----------------~~p--------~~~~~~~~~li~~~l~~~P~~R~-~a~~ 245 (318)
T cd05582 216 -----------------GMP--------QFLSPEAQSLLRALFKRNPANRL-GAGP 245 (318)
T ss_pred -----------------CCC--------CCCCHHHHHHHHHHhhcCHhHcC-CCCC
Confidence 000 01134568899999999999999 8544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=315.47 Aligned_cols=255 Identities=27% Similarity=0.458 Sum_probs=200.7
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.++||+|+||.||+|++..+ ..||+|+++.... ..+.+.+|++++++++||||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcE
Confidence 35799999999999999999998744 5699999875332 33678999999999999999999988643 3468
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|+|+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCce
Confidence 99999999999999976432 2378999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... .......++..|+|||+..+..++.++|||||||++|||++ |..||...... ...+....
T Consensus 150 ~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~~~~~~~~--- 218 (262)
T cd05071 150 RLIEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVER--- 218 (262)
T ss_pred eecccccc------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--HHHHHHhc---
Confidence 76532211 11123346778999999988889999999999999999999 88888653211 11100000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
. . ..|. ..++...+.+++.+|++.+|++|| +++++++.|+..
T Consensus 219 -~----~-------------~~~~------~~~~~~~l~~li~~~l~~~p~~Rp-~~~~~~~~l~~~ 260 (262)
T cd05071 219 -G----Y-------------RMPC------PPECPESLHDLMCQCWRKEPEERP-TFEYLQAFLEDY 260 (262)
T ss_pred -C----C-------------CCCC------ccccCHHHHHHHHHHccCCcccCC-CHHHHHHHHHHh
Confidence 0 0 0000 012355688999999999999999 999999998763
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=313.19 Aligned_cols=250 Identities=24% Similarity=0.393 Sum_probs=193.7
Q ss_pred ceeccccEEEEEEEeC--CCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEee
Q 001738 711 MIGQGSFGFVYRGILG--EGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEY 787 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~ 787 (1019)
.||+|+||.||+|.+. ..+..||+|++..... ...+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 4899999999999764 4466799999875533 334678899999999999999999998753 457899999
Q ss_pred ccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccc
Q 001738 788 MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867 (1019)
Q Consensus 788 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 867 (1019)
+++++|.+++..... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 76 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999875432 389999999999999999999999 999999999999999999999999999975432
Q ss_pred cCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhh
Q 001738 868 CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIE 946 (1019)
Q Consensus 868 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1019)
... .........++..|+|||+..+..++.++|||||||++||+++ |..||...... ..........+
T Consensus 148 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~----- 216 (257)
T cd05115 148 DDS----YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGKR----- 216 (257)
T ss_pred Ccc----ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCCC-----
Confidence 211 0111112234678999999888889999999999999999996 99999753221 11111111000
Q ss_pred ccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 947 IVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 947 ~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.+.. ..+..++.+++.+||+.+|++|| ++.+|.+.|+.+
T Consensus 217 ----------------~~~~------~~~~~~l~~li~~c~~~~~~~Rp-~~~~i~~~l~~~ 255 (257)
T cd05115 217 ----------------LDCP------AECPPEMYALMKDCWIYKWEDRP-NFAKVEERMRTY 255 (257)
T ss_pred ----------------CCCC------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHhhh
Confidence 0000 11245678999999999999999 999999988764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=317.24 Aligned_cols=253 Identities=27% Similarity=0.409 Sum_probs=200.6
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhh--HHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|++.+.||+|+||+||+|++..+++.||+|++........ ....+|+.++++++||||+++++++... ...++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-----NYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES-----SEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc-----ccccc
Confidence 6678999999999999999999999999999986644332 2345699999999999999999999885 77899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... +++..+..++.|+++||++||+. +|+|+||||+||+++.++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNKP------LSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHHSS------BBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccccc------ccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 9999999999999984332 89999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
.... .........++..|+|||+.. +..++.++||||+|+++|+|++|..||... ...+...........
T Consensus 147 ~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~--~~~~~~~~~~~~~~~ 217 (260)
T PF00069_consen 147 KLSE-------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES--NSDDQLEIIEKILKR 217 (260)
T ss_dssp ESTS-------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS--SHHHHHHHHHHHHHT
T ss_pred cccc-------cccccccccccccccccccccccccccccccccccccccccccccccccccc--cchhhhhhhhhcccc
Confidence 5411 122333467899999999988 788999999999999999999999999764 111111111111100
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
....... ........+.+++.+||+.||++|| ++.++++
T Consensus 218 ~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~R~-~~~~l~~ 256 (260)
T PF00069_consen 218 PLPSSSQ---------------------QSREKSEELRDLIKKMLSKDPEQRP-SAEELLK 256 (260)
T ss_dssp HHHHHTT---------------------SHTTSHHHHHHHHHHHSSSSGGGST-THHHHHT
T ss_pred ccccccc---------------------ccchhHHHHHHHHHHHccCChhHCc-CHHHHhc
Confidence 0000000 0000125689999999999999999 9999875
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=323.98 Aligned_cols=267 Identities=24% Similarity=0.344 Sum_probs=205.5
Q ss_pred hCCCCCCCceeccccEEEEEEEeCC-------CCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGE-------GGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSI 773 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 773 (1019)
.++|.+.+.||+|+||.||+|++.. ++..||+|.++... ......+.+|+.+++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3579999999999999999998642 23579999997542 33446788899999999 799999999998776
Q ss_pred CCCCcceEEEEEeeccCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCC
Q 001738 774 DSHGVDFKALVYEYMQNGSLEEWLHHSNDQH----------DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 843 (1019)
+..++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ |++||||||
T Consensus 97 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 -----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 56899999999999999998653211 123488999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCC
Q 001738 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPT 922 (1019)
Q Consensus 844 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf 922 (1019)
+||+++.++.+||+|||.++....... ........+++.|+|||++.+..++.++||||+||++|||++ |..||
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~ 243 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccch-----hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999875432110 111112234578999999988889999999999999999998 88888
Q ss_pred CCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 923 DSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
.... ..+..... .... .+ +....+..++.+++.+||+.+|++|| |+.||+
T Consensus 244 ~~~~-----~~~~~~~~-~~~~------------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~evl 293 (307)
T cd05098 244 PGVP-----VEELFKLL-KEGH------------------RM-----DKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLV 293 (307)
T ss_pred CcCC-----HHHHHHHH-HcCC------------------CC-----CCCCcCCHHHHHHHHHHcccChhhCc-CHHHHH
Confidence 6421 11111110 0000 00 00011245678899999999999999 999999
Q ss_pred HHHHHHHHhh
Q 001738 1003 AKLCAAREAF 1012 (1019)
Q Consensus 1003 ~~L~~i~~~~ 1012 (1019)
+.|+++.+..
T Consensus 294 ~~l~~~~~~~ 303 (307)
T cd05098 294 EDLDRILALT 303 (307)
T ss_pred HHHHHHHHHh
Confidence 9999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=325.76 Aligned_cols=206 Identities=18% Similarity=0.176 Sum_probs=168.4
Q ss_pred CCCceecc--ccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 708 TSNMIGQG--SFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 708 ~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
+.++||+| +|++||+++++.+|+.||+|+++... ....+.+.+|+++++.++||||+++++++... +..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 46789999 78999999999999999999997542 23345678899999999999999999999876 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 9999999999999976432 1389999999999999999999999 99999999999999999999999998765
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
....................++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 432111100000111122356788999999876 45899999999999999999999999753
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=322.99 Aligned_cols=267 Identities=23% Similarity=0.389 Sum_probs=201.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCC----------------CCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGE----------------GGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKI 766 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~ 766 (1019)
++|++.+.||+|+||.||+|++.. ++..||+|++.... .....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 579999999999999999986432 34579999987543 3345678999999999999999999
Q ss_pred EEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCC-----CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecc
Q 001738 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH-----DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDL 841 (1019)
Q Consensus 767 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 841 (1019)
++++... +..++||||+++++|.+++....... ....+++..+..++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 9998776 56799999999999999997654211 123478889999999999999999999 9999999
Q ss_pred CCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh--CC
Q 001738 842 KPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI--RK 919 (1019)
Q Consensus 842 kp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~--g~ 919 (1019)
||+||+++.++.++|+|||+++.+..... ........++..|+|||...++.++.++|||||||++|||++ |.
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence 99999999999999999999976532211 111122344678999999888889999999999999999998 67
Q ss_pred CCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 920 RPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 920 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
.||...... ................. ..|.. ..+...+.+++.+||+.||.+|| +++
T Consensus 232 ~p~~~~~~~--~~~~~~~~~~~~~~~~~--------------~~~~~------~~~~~~~~~li~~cl~~~p~~Rp-~~~ 288 (296)
T cd05095 232 QPYSQLSDE--QVIENTGEFFRDQGRQV--------------YLPKP------ALCPDSLYKLMLSCWRRNAKERP-SFQ 288 (296)
T ss_pred CCccccChH--HHHHHHHHHHhhccccc--------------cCCCC------CCCCHHHHHHHHHHcCCCcccCC-CHH
Confidence 788642211 11111100000000000 00000 11245688999999999999999 999
Q ss_pred HHHHHHH
Q 001738 1000 NVVAKLC 1006 (1019)
Q Consensus 1000 evl~~L~ 1006 (1019)
||++.|+
T Consensus 289 ~i~~~l~ 295 (296)
T cd05095 289 EIHATLL 295 (296)
T ss_pred HHHHHHh
Confidence 9999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=320.87 Aligned_cols=269 Identities=23% Similarity=0.380 Sum_probs=204.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDS 775 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 775 (1019)
..++|++.++||+|+||.||+|..+ ..+..||+|.++.... .....+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 3568999999999999999999764 2356899998864432 2335678899999999999999999998766
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCC----CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQ----HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD 851 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 851 (1019)
...++||||+++|+|.++++..... ......++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 82 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 82 ---QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred ---CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 5679999999999999999764321 1123367788899999999999999999 99999999999999999
Q ss_pred CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 001738 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGL 930 (1019)
Q Consensus 852 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~ 930 (1019)
+.+||+|||+++....... ........++..|+|||...+..++.++|||||||++|||++ |..||.....+
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~-- 228 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-- 228 (288)
T ss_pred CcEEECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 9999999999876432221 111112345678999999988889999999999999999998 78888642111
Q ss_pred cHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 931 TIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
.... ........ ..| +.+...+.+++.+|++.||++|| |+.|+++.+++...
T Consensus 229 ~~~~---~~~~~~~~----------------~~~--------~~~~~~~~~li~~~l~~~p~~Rp-s~~~ll~~l~~~~~ 280 (288)
T cd05061 229 QVLK---FVMDGGYL----------------DQP--------DNCPERVTDLMRMCWQFNPKMRP-TFLEIVNLLKDDLH 280 (288)
T ss_pred HHHH---HHHcCCCC----------------CCC--------CCCCHHHHHHHHHHcCCChhHCc-CHHHHHHHHHhhcC
Confidence 1111 10000000 000 11235689999999999999999 99999999987654
Q ss_pred hhh
Q 001738 1011 AFL 1013 (1019)
Q Consensus 1011 ~~~ 1013 (1019)
..-
T Consensus 281 ~~~ 283 (288)
T cd05061 281 PSF 283 (288)
T ss_pred CCC
Confidence 443
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=333.10 Aligned_cols=258 Identities=25% Similarity=0.396 Sum_probs=208.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCE----EEEEEEeec-ccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGL----LVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
..+..++||.|+||+||+|.|-..|+ +||+|++.. .......++.+|+.+|.+++|||++++++++...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 34556899999999999999965554 789999863 3444568899999999999999999999999875
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
...||++|+++|+|.+|++.++.. +.....+.|..|||+||.|||++ ++|||||..+||||....++||.||
T Consensus 771 ~~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdf 842 (1177)
T KOG1025|consen 771 TLQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDF 842 (1177)
T ss_pred hHHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEec
Confidence 367999999999999999987653 78889999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+|+....... ........-.+.|||-|.+....|+.++|||||||++||++| |..|++++..++.
T Consensus 843 gla~ll~~d~~-----ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-------- 909 (1177)
T KOG1025|consen 843 GLAKLLAPDEK-----EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-------- 909 (1177)
T ss_pred chhhccCcccc-----cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh--------
Confidence 99998754432 222223344788999999999999999999999999999999 9999987543221
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
.+.+... .+-.+.+-|...+..++.+||..|++.|| +++++...+.+....
T Consensus 910 ------~dlle~g---------------eRLsqPpiCtiDVy~~mvkCwmid~~~rp-~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 910 ------PDLLEKG---------------ERLSQPPICTIDVYMVMVKCWMIDADSRP-TFKELAEEFSRMARD 960 (1177)
T ss_pred ------hHHHhcc---------------ccCCCCCCccHHHHHHHHHHhccCcccCc-cHHHHHHHHHHHhcC
Confidence 1111100 00111123566689999999999999999 999999999877644
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=332.76 Aligned_cols=280 Identities=20% Similarity=0.180 Sum_probs=203.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-Cc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-GV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 778 (1019)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++...... ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 357899999999999999999999989999999998643 233446778999999999999999999987654321 22
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||+++ ++.+++... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~~--------~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHhc--------CCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 467999999964 777777532 78889999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 170 fG~a~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~~~~ 239 (364)
T cd07875 170 FGLARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH--IDQWNKVIE 239 (364)
T ss_pred CCCccccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 9999754221 122345789999999999999999999999999999999999999975321 111111111
Q ss_pred hCCc---chhhccChhhhhhhhccCCC--------CCC---CCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 ALPQ---RVIEIVDPLLLLEVRTNNSK--------NPC---GDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~~~~---~~~~~~d~~l~~~~~~~~~~--------~p~---~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.... .+...+.+............ .+. .............+.+++.+|++.||.+|| |++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~-t~~e~L~h 318 (364)
T cd07875 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI-SVDEALQH 318 (364)
T ss_pred hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCC-CHHHHhcC
Confidence 1111 11111111111100000000 000 000000011234678999999999999999 99999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=316.51 Aligned_cols=258 Identities=27% Similarity=0.438 Sum_probs=202.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE---EEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL---LVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.+|+..+.||+|+||.||+|+...++. .+|+|.++.. .....+.+..|++++++++|||++++.+++... +
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF-----K 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC-----C
Confidence 478889999999999999999865543 7999998754 233456788999999999999999999998766 5
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHDG-----EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCC
Confidence 68999999999999999976432 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|++........ ..........+..|+|||++.+..++.++|||||||++|||++ |+.||..... ........
T Consensus 152 g~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~- 224 (268)
T cd05063 152 GLSRVLEDDPE----GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAIN- 224 (268)
T ss_pred ccceecccccc----cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHh-
Confidence 99976532211 1111111223567999999988889999999999999999997 9999864321 11111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.. . ..|. ...+..++.+++.+||+.+|++|| ++++|++.|+++
T Consensus 225 ---~~--------~---------~~~~------~~~~~~~~~~li~~c~~~~p~~Rp-~~~~i~~~l~~~ 267 (268)
T cd05063 225 ---DG--------F---------RLPA------PMDCPSAVYQLMLQCWQQDRARRP-RFVDIVNLLDKL 267 (268)
T ss_pred ---cC--------C---------CCCC------CCCCCHHHHHHHHHHcCCCcccCc-CHHHHHHHHHhh
Confidence 00 0 0000 012345678999999999999999 999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=319.73 Aligned_cols=260 Identities=23% Similarity=0.404 Sum_probs=203.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCC-----CEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEG-----GLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
++|++.+.||+|+||.||+|.+... +..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---- 81 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG---- 81 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC----
Confidence 5788999999999999999988643 4789999986443 23346788999999999999999999998776
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCC----CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQH----DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV 853 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 853 (1019)
...++||||+++++|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 82 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~ 157 (277)
T cd05032 82 -QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLT 157 (277)
T ss_pred -CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCC
Confidence 66899999999999999997644211 123478899999999999999999999 9999999999999999999
Q ss_pred eEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccH
Q 001738 854 AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTI 932 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~ 932 (1019)
+||+|||+++....... ........++..|+|||...+..++.++|||||||++||+++ |..||..... ...
T Consensus 158 ~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~ 230 (277)
T cd05032 158 VKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEV 230 (277)
T ss_pred EEECCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHH
Confidence 99999999976533221 111223356789999999988889999999999999999998 9999864221 111
Q ss_pred HHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 933 HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 933 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
...... .... ..| ..+...+.+++.+||+.+|++|| |+.|+++.|+
T Consensus 231 ~~~~~~---~~~~----------------~~~--------~~~~~~~~~li~~~l~~~p~~Rp-t~~~l~~~l~ 276 (277)
T cd05032 231 LKFVID---GGHL----------------DLP--------ENCPDKLLELMRMCWQYNPKMRP-TFLEIVSSLK 276 (277)
T ss_pred HHHHhc---CCCC----------------CCC--------CCCCHHHHHHHHHHcCCChhhCC-CHHHHHHHhc
Confidence 111110 0000 000 01245688999999999999999 9999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=327.12 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=207.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.|.|+..||.|+||.||+|..+.++-..|.|++........++|.-|++|+..+.||+||++++.|... +..||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e-----nkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE-----NKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-----CceEEE
Confidence 466777899999999999999988888899999888888889999999999999999999999988776 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
.|||.||..+..+-.-+. .+++.++..+++|++.||.|||++ +|||||+|+.|||++-+|.++|+|||.+..
T Consensus 108 iEFC~GGAVDaimlEL~r-----~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGR-----VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EeecCCchHhHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 999999999998877553 399999999999999999999999 999999999999999999999999998764
Q ss_pred ccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.. .+......+.|||+|||||+.. ..+|++++||||||+++.||..+.+|.... +......+.
T Consensus 180 n~-------~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel-----npMRVllKi 247 (1187)
T KOG0579|consen 180 NK-------STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKI 247 (1187)
T ss_pred ch-------hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc-----chHHHHHHH
Confidence 32 1333455689999999999754 568999999999999999999999997542 222222222
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.......++.|. .....+.+++.+|+.+||..|| +++++++
T Consensus 248 aKSePPTLlqPS----------------------~Ws~~F~DfLk~cL~Knp~~Rp-~aaqll~ 288 (1187)
T KOG0579|consen 248 AKSEPPTLLQPS----------------------HWSRSFSDFLKRCLVKNPRNRP-PAAQLLK 288 (1187)
T ss_pred hhcCCCcccCcc----------------------hhhhHHHHHHHHHHhcCCccCC-CHHHHhh
Confidence 111112222221 2245689999999999999999 9999986
|
|
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=317.09 Aligned_cols=260 Identities=27% Similarity=0.433 Sum_probs=202.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE---EEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL---LVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
++|++.+.||+|+||.||+|++..+++ .||||+++.. .....+++..|+.++++++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS-----R 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC-----C
Confidence 468889999999999999999876554 6999998754 344457899999999999999999999998765 5
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++.+++.++.|++.|++|||++ |++||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 67999999999999999976432 289999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.+.......... ..........+..|+|||++.+..++.++||||+||++||+++ |..||..... ....+....
T Consensus 151 g~~~~~~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~ 226 (269)
T cd05065 151 GLSRFLEDDTSDP--TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQ 226 (269)
T ss_pred ccccccccCcccc--ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHc
Confidence 9987653322110 0011111122457999999998899999999999999999886 9999865321 111111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.. ..|. ..+++..+.+++.+||+.+|.+|| ++++|+..|+++
T Consensus 227 ~~---------------------~~~~------~~~~~~~~~~li~~~l~~~p~~Rp-~~~~i~~~l~~~ 268 (269)
T cd05065 227 DY---------------------RLPP------PMDCPTALHQLMLDCWQKDRNARP-KFGQIVSTLDKM 268 (269)
T ss_pred CC---------------------cCCC------cccCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHhh
Confidence 00 0000 012345678999999999999999 999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=322.27 Aligned_cols=250 Identities=23% Similarity=0.283 Sum_probs=202.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|||++++++++... ...++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG-----DELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC-----ceEEE
Confidence 4699999999999999999999889999999999765555567788999999999999999999998765 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
|+||+++++|.+++.... +++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTETC-------MDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 999999999999987543 89999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
...... .......|+..|+|||.+.+..++.++|||||||++|+|++|+.||...... .............
T Consensus 164 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--~~~~~~~~~~~~~ 234 (296)
T cd06655 164 QITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIATNGTPE 234 (296)
T ss_pred hccccc-------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCcc
Confidence 543211 1122346789999999998888999999999999999999999999653211 0000000000000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+ .........+.+++.+||+.||.+|| +++++++
T Consensus 235 --------~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rp-t~~~il~ 268 (296)
T cd06655 235 --------L-----------------QNPEKLSPIFRDFLNRCLEMDVEKRG-SAKELLQ 268 (296)
T ss_pred --------c-----------------CCcccCCHHHHHHHHHHhhcChhhCC-CHHHHhh
Confidence 0 00011234578899999999999999 9999976
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=315.67 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=199.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++..+.....||+|+||.||+|++..++..||+|.+........+.+.+|+.++++++|+||+++++++... +..
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 80 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN-----GFF 80 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC-----CEE
Confidence 445556667899999999999999888999999998766655667889999999999999999999998776 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCCeEEeeec
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDFG 860 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg 860 (1019)
++|+||+++++|.+++..... ....++..+..++.||+.|++|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWG---PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcc---cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecch
Confidence 999999999999999986431 11127888899999999999999999 9999999999999986 6799999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE--ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
.+....... .......|++.|+|||++.+.. ++.++||||+|+++|+|++|+.||............ ..
T Consensus 155 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~--~~ 225 (268)
T cd06624 155 TSKRLAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK--VG 225 (268)
T ss_pred hheecccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh--hh
Confidence 987542211 1122345789999999986643 789999999999999999999998653221111100 00
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. . ..+.+ . ....+++.+++.+||+.+|.+|| |++|+++.
T Consensus 226 ~~-----~-~~~~~----------------~---~~~~~~~~~li~~~l~~~p~~Rp-t~~~ll~~ 265 (268)
T cd06624 226 MF-----K-IHPEI----------------P---ESLSAEAKNFILRCFEPDPDKRA-SAHDLLQD 265 (268)
T ss_pred hh-----c-cCCCC----------------C---cccCHHHHHHHHHHcCCCchhCC-CHHHHHhC
Confidence 00 0 00000 0 11244578999999999999999 99999763
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=322.27 Aligned_cols=268 Identities=23% Similarity=0.347 Sum_probs=204.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCC----------------EEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGG----------------LLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIK 765 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 765 (1019)
.++|++.+.||+|+||.||+|++...+ ..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 358999999999999999999876433 568999987543 344577899999999999999999
Q ss_pred EEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCC-----CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 001738 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH-----DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGD 840 (1019)
Q Consensus 766 ~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 840 (1019)
+++++... +..++||||+++++|.+++....... ....+++..++.++.|++.||+|||++ +|+|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 99998776 56899999999999999997654211 122489999999999999999999999 999999
Q ss_pred cCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh--C
Q 001738 841 LKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI--R 918 (1019)
Q Consensus 841 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~--g 918 (1019)
|||+||+++.++.++|+|||.++....... ........+++.|+|||+..+..++.++|||||||++|||++ |
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 230 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCC
Confidence 999999999999999999999876532221 111223456789999999988889999999999999999998 6
Q ss_pred CCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 919 KRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 919 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
..||..... .............. .. .+..... ..+..++.+++.+||+.||.+|| |+
T Consensus 231 ~~p~~~~~~--~~~~~~~~~~~~~~-----~~------------~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rp-t~ 287 (296)
T cd05051 231 EQPYEHLTD--QQVIENAGHFFRDD-----GR------------QIYLPRP---PNCPKDIYELMLECWRRDEEDRP-TF 287 (296)
T ss_pred CCCCCCcCh--HHHHHHHHhccccc-----cc------------cccCCCc---cCCCHHHHHHHHHHhccChhcCC-CH
Confidence 777754321 11111111100000 00 0000000 11235689999999999999999 99
Q ss_pred HHHHHHHH
Q 001738 999 RNVVAKLC 1006 (1019)
Q Consensus 999 ~evl~~L~ 1006 (1019)
+||++.|+
T Consensus 288 ~el~~~L~ 295 (296)
T cd05051 288 REIHLFLQ 295 (296)
T ss_pred HHHHHHhc
Confidence 99998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=329.05 Aligned_cols=239 Identities=26% Similarity=0.291 Sum_probs=188.0
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHH-HHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECE-ALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||+||+|++..+|+.||+|++.... ......+..|.. +++.++||||+++++++... +..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT-----EKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC-----CEEEEEE
Confidence 46999999999999999899999999997432 223345555655 46778999999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|..++..... +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRERS------FPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 99999999998876543 89999999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .+.........
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~~~-- 212 (325)
T cd05604 147 IA-------QSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILHKP-- 212 (325)
T ss_pred CC-------CCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHcCC--
Confidence 11 11122345789999999999999999999999999999999999999965311 11111111000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN 1000 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~e 1000 (1019)
+ ...| .....+.+++.+|++.+|.+|| ++.+
T Consensus 213 ------~--------~~~~---------~~~~~~~~ll~~ll~~~p~~R~-~~~~ 243 (325)
T cd05604 213 ------L--------VLRP---------GASLTAWSILEELLEKDRQRRL-GAKE 243 (325)
T ss_pred ------c--------cCCC---------CCCHHHHHHHHHHhccCHHhcC-CCCC
Confidence 0 0000 0134467899999999999999 8754
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=321.11 Aligned_cols=265 Identities=23% Similarity=0.373 Sum_probs=205.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeC-------CCCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILG-------EGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSI 773 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 773 (1019)
..+|++.+.||+|+||.||+|++. .++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 457899999999999999999752 235689999986432 33456789999999999 899999999998776
Q ss_pred CCCCcceEEEEEeeccCCCHHHHHhccCCCC----------CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCC
Q 001738 774 DSHGVDFKALVYEYMQNGSLEEWLHHSNDQH----------DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 843 (1019)
...++||||+++|+|.+++....... ....+++..+..++.||+.||+|||++ |++||||||
T Consensus 94 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 165 (304)
T cd05101 94 -----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAA 165 (304)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 66899999999999999998653211 123478899999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCC
Q 001738 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPT 922 (1019)
Q Consensus 844 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf 922 (1019)
+||+++.++.+||+|||.++...... .........+++.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 240 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNID-----YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240 (304)
T ss_pred ceEEEcCCCcEEECCCccceeccccc-----ccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999998653221 1111222345678999999988889999999999999999998 78888
Q ss_pred CCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 923 DSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
.... ..+........... ..| ..+...+.+++.+||+.+|.+|| |+.|++
T Consensus 241 ~~~~-----~~~~~~~~~~~~~~----------------~~~--------~~~~~~~~~li~~cl~~~p~~Rp-s~~e~l 290 (304)
T cd05101 241 PGIP-----VEELFKLLKEGHRM----------------DKP--------ANCTNELYMMMRDCWHAIPSHRP-TFKQLV 290 (304)
T ss_pred ccCC-----HHHHHHHHHcCCcC----------------CCC--------CCCCHHHHHHHHHHcccChhhCC-CHHHHH
Confidence 5421 11111111000000 000 12345678999999999999999 999999
Q ss_pred HHHHHHHH
Q 001738 1003 AKLCAARE 1010 (1019)
Q Consensus 1003 ~~L~~i~~ 1010 (1019)
+.|+++..
T Consensus 291 ~~l~~~~~ 298 (304)
T cd05101 291 EDLDRILT 298 (304)
T ss_pred HHHHHHHH
Confidence 99988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=314.02 Aligned_cols=253 Identities=27% Similarity=0.491 Sum_probs=199.5
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||.||+|.+. ++..||+|.++.... ..+.+.+|+.++++++|++++++++++.. ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~l 77 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIYI 77 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcEE
Confidence 47899999999999999999876 567799999875433 34678999999999999999999998743 34689
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred EEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeee
Confidence 9999999999999976432 2389999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ........++..|+|||...+..++.++||||||+++|||++ |..||..... ....+......
T Consensus 151 ~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~-- 220 (260)
T cd05070 151 LIEDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQVERGY-- 220 (260)
T ss_pred eccCcc------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCC--
Confidence 653211 111112345678999999988889999999999999999999 8889865321 11111110000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
..|.. ......+.+++.+|++.+|.+|| |++++.+.|+.
T Consensus 221 -------------------~~~~~------~~~~~~~~~li~~~l~~~p~~Rp-t~~~l~~~l~~ 259 (260)
T cd05070 221 -------------------RMPCP------QDCPISLHELMLQCWKKDPEERP-TFEYLQSFLED 259 (260)
T ss_pred -------------------CCCCC------CcCCHHHHHHHHHHcccCcccCc-CHHHHHHHHhc
Confidence 00000 11245689999999999999999 99999988864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=320.11 Aligned_cols=276 Identities=22% Similarity=0.290 Sum_probs=198.7
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++|||++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE-----SRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-----CeEE
Confidence 5888999999999999999998899999999986442 22346788999999999999999999999875 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||++ ++|.+++..... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999997 689888875432 23489999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh--
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA-- 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-- 939 (1019)
...... ........+++.|+|||++.+. .++.++||||+||++|||++|++||....... .........
T Consensus 149 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~ 220 (285)
T cd07861 149 RAFGIP-------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGT 220 (285)
T ss_pred eecCCC-------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 754211 1111233568899999987654 47899999999999999999999997532211 111100000
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
........... ...+.....................++.+++.+||+.||++|| |+++|++
T Consensus 221 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp-t~~~ll~ 281 (285)
T cd07861 221 PTEDVWPGVTS--LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRI-SAKKALN 281 (285)
T ss_pred CChhhhhcchh--hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCC-CHHHHhc
Confidence 00000000000 0000000000000000000011345678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=312.72 Aligned_cols=251 Identities=32% Similarity=0.451 Sum_probs=202.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++++++|+|++++++++... ...+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQG-----NPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----CCeE
Confidence 357899999999999999999984 78999999975544 457889999999999999999999998764 6689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.++++.... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 99999999999999976542 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+...... ....++..|+|||+..+..++.++||||||+++||+++ |..||..... ...........+
T Consensus 150 ~~~~~~~----------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~ 217 (256)
T cd05039 150 KEASQGQ----------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPHVEKGYR 217 (256)
T ss_pred ccccccc----------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhcCCC
Confidence 8652111 12234678999999988889999999999999999997 9999864311 111111110000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
. ..| ..++..+.+++.+||+.+|++|| |++|+++.|+.+
T Consensus 218 ~-------------------~~~--------~~~~~~~~~li~~~l~~~p~~Rp-~~~~l~~~l~~~ 256 (256)
T cd05039 218 M-------------------EAP--------EGCPPEVYKVMKDCWELDPAKRP-TFKQLREQLALI 256 (256)
T ss_pred C-------------------CCc--------cCCCHHHHHHHHHHhccChhhCc-CHHHHHHHHhcC
Confidence 0 000 11245678999999999999999 999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=317.56 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=198.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|++++++++|++++++.+++... +..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-----CEE
Confidence 3677789999999999999999899999999986432 22234577899999999999999999988776 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCc
Confidence 999999999999998865432 2389999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+...... .......|+..|+|||++.+..++.++||||+||++|||++|..||...... ...+.......
T Consensus 149 ~~~~~~~--------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--~~~~~~~~~~~ 218 (285)
T cd05632 149 AVKIPEG--------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--VKREEVDRRVL 218 (285)
T ss_pred ceecCCC--------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhhh
Confidence 8754211 1112346899999999998889999999999999999999999999753211 11111111111
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-----HHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE-----MRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s-----~~evl~~ 1004 (1019)
... ..+. .+....+.+++..|++.||++|| + ++++++.
T Consensus 219 ~~~-~~~~-----------------------~~~~~~~~~li~~~l~~~P~~R~-~~~~~~~~~l~~~ 261 (285)
T cd05632 219 ETE-EVYS-----------------------AKFSEEAKSICKMLLTKDPKQRL-GCQEEGAGEVKRH 261 (285)
T ss_pred ccc-cccC-----------------------ccCCHHHHHHHHHHccCCHhHcC-CCcccChHHHHcC
Confidence 000 0000 11234568899999999999999 8 6666653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=327.08 Aligned_cols=238 Identities=28% Similarity=0.307 Sum_probs=186.5
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHH-HHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECE-ALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++.+. +..|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA-----EKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC-----CEEEEEE
Confidence 46999999999999999899999999987432 222344555554 57889999999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|..++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRERC------FLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 99999999998876442 88899999999999999999999 9999999999999999999999999998742
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .........||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+.........
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~-- 212 (321)
T cd05603 147 VE-------PEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNILHKP-- 212 (321)
T ss_pred CC-------CCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHhcCC--
Confidence 11 1112234578999999999998899999999999999999999999996531 111111111000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
. ..| . .....+.+++.+|++.||.+|| ++.
T Consensus 213 ------~---------~~~----~----~~~~~~~~li~~~l~~~p~~R~-~~~ 242 (321)
T cd05603 213 ------L---------QLP----G----GKTVAACDLLVGLLHKDQRRRL-GAK 242 (321)
T ss_pred ------C---------CCC----C----CCCHHHHHHHHHHccCCHhhcC-CCC
Confidence 0 000 0 0134578999999999999999 653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=320.07 Aligned_cols=259 Identities=24% Similarity=0.396 Sum_probs=200.1
Q ss_pred CCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
+|++.+.||+|+||.||+|++.. .++.||+|+++..... ..+.+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~----- 80 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE----- 80 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 47778899999999999998753 3578999999754332 346688999999999999999999998776
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
...++++||+++++|.+++...... .....+++..+..++.|++.||+|+|++ +|+||||||+||++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 5678999999999999998643210 1123488899999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFN 927 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~ 927 (1019)
++++.+||+|||+++...... .........+++.|+|||++.+..++.++||||+||++|||++ |..||.....
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 232 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAAD-----YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 232 (283)
T ss_pred cCCCceEecccccccccccch-----heeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999987653221 1111223346789999999988889999999999999999998 8888865311
Q ss_pred CcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
....+... ..... +. ...+...+.+++..||+.+|++|| ++++|++.|+
T Consensus 233 --~~~~~~i~---~~~~~------------------~~------~~~~~~~~~~li~~cl~~~p~~RP-~~~~i~~~l~ 281 (283)
T cd05091 233 --QDVIEMIR---NRQVL------------------PC------PDDCPAWVYTLMLECWNEFPSRRP-RFKDIHSRLR 281 (283)
T ss_pred --HHHHHHHH---cCCcC------------------CC------CCCCCHHHHHHHHHHhCCCcccCC-CHHHHHHHhh
Confidence 11111111 00000 00 012355678999999999999999 9999999886
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=315.61 Aligned_cols=254 Identities=23% Similarity=0.313 Sum_probs=204.5
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||.||+|.+..+++.+|+|++........+.+.+|++++++++||||+++++++... ...++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR-----DKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC-----CEEEE
Confidence 5789999999999999999999888999999999876655668899999999999999999999998776 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
+|||+++++|.+++..... .+++..+..++.|++.|++|||++ +++||||+|+||+++.++.+||+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 9999999999999876521 289999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS---EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
...... .......++..|+|||...+. .++.++||||+||++|||++|+.||....... .......
T Consensus 150 ~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-~~~~~~~--- 218 (262)
T cd06613 150 QLTATI-------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-ALFLISK--- 218 (262)
T ss_pred hhhhhh-------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh---
Confidence 543211 112234678899999998776 78999999999999999999999996532110 0000000
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... ..+. ..........+.+++.+||+.+|.+|| |+++|+.
T Consensus 219 -~~~---~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp-t~~~il~ 259 (262)
T cd06613 219 -SNF---PPPK-----------------LKDKEKWSPVFHDFIKKCLTKDPKKRP-TATKLLQ 259 (262)
T ss_pred -ccC---CCcc-----------------ccchhhhhHHHHHHHHHHcCCChhhCC-CHHHHhc
Confidence 000 0000 001122345689999999999999999 9999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=321.81 Aligned_cols=269 Identities=25% Similarity=0.389 Sum_probs=205.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeC-------CCCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILG-------EGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSI 773 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 773 (1019)
.++|.+.+.||+|+||.||+|++. .....||+|.++... ......+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357899999999999999999753 235679999987442 33456788999999999 699999999998765
Q ss_pred CCCCcceEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCC
Q 001738 774 DSHGVDFKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 843 (1019)
...++||||+++|+|.+++...... .....+++.++..++.|++.||+|||++ |++||||||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 91 -----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 5689999999999999999764321 1123489999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCC
Q 001738 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPT 922 (1019)
Q Consensus 844 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf 922 (1019)
+||+++.++.+||+|||.++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~ 237 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDY-----YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237 (314)
T ss_pred eeEEEcCCCcEEEcccccccccccccc-----ccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCC
Confidence 999999999999999999976532111 011111234567999999988889999999999999999999 88898
Q ss_pred CCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 923 DSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
..... ....+.... ....+ .| ..+..++.+++.+||+.+|++|| |+.|++
T Consensus 238 ~~~~~--~~~~~~~~~---~~~~~----------------~~--------~~~~~~l~~li~~cl~~~p~~Rp-s~~~ll 287 (314)
T cd05099 238 PGIPV--EELFKLLRE---GHRMD----------------KP--------SNCTHELYMLMRECWHAVPTQRP-TFKQLV 287 (314)
T ss_pred CCCCH--HHHHHHHHc---CCCCC----------------CC--------CCCCHHHHHHHHHHcCCCcccCc-CHHHHH
Confidence 64321 111111100 00000 00 11244678999999999999999 999999
Q ss_pred HHHHHHHHhhhh
Q 001738 1003 AKLCAAREAFLS 1014 (1019)
Q Consensus 1003 ~~L~~i~~~~~~ 1014 (1019)
+.|+++......
T Consensus 288 ~~l~~~~~~~~~ 299 (314)
T cd05099 288 EALDKVLAAVSE 299 (314)
T ss_pred HHHHHHHHHhcC
Confidence 999998765443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=322.65 Aligned_cols=245 Identities=27% Similarity=0.348 Sum_probs=199.1
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc---hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
|.-.+.||.|+||.||.|++..+.+.||||.+....+ ....++.+|+.++++++|||++.+-|+|-.. ...|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-----~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-----HTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----chHH
Confidence 5556789999999999999999999999999875543 3456789999999999999999999999876 6689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||| -|+-.|.+.-.+. ++.+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.|||+|||.|
T Consensus 103 LVMEYC-lGSAsDlleVhkK-----plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHH-hccHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 999999 5688888865542 488999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.+.. ....++|||+|||||++. .+.|+-++||||+|++..|+.-+++|...+.. ... ...
T Consensus 174 si~~-----------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-----MSA-LYH 236 (948)
T KOG0577|consen 174 SIMA-----------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSA-LYH 236 (948)
T ss_pred hhcC-----------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-----HHH-HHH
Confidence 8652 233579999999999865 56899999999999999999999999754311 000 001
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
+.+.- .|.+ +..+..+.+.+++..|+++-|.+|| |.+++++.
T Consensus 237 IAQNe----sPtL------------------qs~eWS~~F~~Fvd~CLqKipqeRp-tse~ll~H 278 (948)
T KOG0577|consen 237 IAQNE----SPTL------------------QSNEWSDYFRNFVDSCLQKIPQERP-TSEELLKH 278 (948)
T ss_pred HHhcC----CCCC------------------CCchhHHHHHHHHHHHHhhCcccCC-cHHHHhhc
Confidence 10110 0111 1123466788999999999999999 99988763
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-35 Score=318.22 Aligned_cols=252 Identities=22% Similarity=0.309 Sum_probs=199.6
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++|||++++++++... ...++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEEEE
Confidence 367888999999999999999988999999999766555667889999999999999999999998776 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
|||+++++|..++.... .++++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 81 ~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 81 IEFCAGGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred EEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccc
Confidence 99999999999876532 2389999999999999999999999 999999999999999999999999999875
Q ss_pred ccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.... ........++..|+|||++. +..++.++||||+||++|||++|++||..... .+.....
T Consensus 153 ~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~ 220 (282)
T cd06643 153 NTRT-------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-----MRVLLKI 220 (282)
T ss_pred cccc-------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-----HHHHHHH
Confidence 4211 11122346899999999874 34578899999999999999999999865321 1111111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.......... | ......+.+++.+||+.+|.+|| +++++++.
T Consensus 221 ~~~~~~~~~~--------------~--------~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~~ 262 (282)
T cd06643 221 AKSEPPTLAQ--------------P--------SRWSSEFKDFLKKCLEKNVDARW-TTTQLLQH 262 (282)
T ss_pred hhcCCCCCCC--------------c--------cccCHHHHHHHHHHccCChhhCc-CHHHHhcC
Confidence 0000000000 0 11234578999999999999999 99998763
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=321.67 Aligned_cols=269 Identities=20% Similarity=0.239 Sum_probs=205.5
Q ss_pred HHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCC
Q 001738 696 YAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSID 774 (1019)
Q Consensus 696 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 774 (1019)
++.+..+.++|++.+.||+|+||.||+|.+..+++.||+|+++.... ....+.+|+.+++++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 44556678899999999999999999999998999999999864322 235678899999999 6999999999886543
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
.......++||||+++++|.+++...... ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 33336789999999999999988643211 22488999999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-----SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG 929 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~ 929 (1019)
||+|||++....... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||......
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~- 235 (286)
T cd06638 164 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM- 235 (286)
T ss_pred EEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-
Confidence 999999987653211 11223468999999998753 45788999999999999999999998653211
Q ss_pred ccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 930 LTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
+..............++ ..+...+.+++.+||+.||++|| |+.|+++..
T Consensus 236 ----~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rp-s~~ell~~~ 284 (286)
T cd06638 236 ----RALFKIPRNPPPTLHQP----------------------ELWSNEFNDFIRKCLTKDYEKRP-TVSDLLQHV 284 (286)
T ss_pred ----HHHhhccccCCCcccCC----------------------CCcCHHHHHHHHHHccCCcccCC-CHHHHhhcc
Confidence 00000000000000000 01134578999999999999999 999998753
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=334.19 Aligned_cols=276 Identities=22% Similarity=0.230 Sum_probs=200.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..+|.+.+.||+|+||.||+|++..+++.||||.... ..+.+|++++++++|+||+++++++... ...+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVG-----GLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEEE
Confidence 4579999999999999999999998999999996432 3457899999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|||++. ++|.+++..... .+++.+++.|+.|++.||+|||++ |||||||||+|||++.++.+||+|||++
T Consensus 237 lv~e~~~-~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEccC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 9999994 789888865432 389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC--cc----cHHHHH
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND--GL----TIHEFA 936 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~--~~----~~~~~~ 936 (1019)
+...... .........||+.|+|||++.+..++.++|||||||++|||++|..|+...... .. .+....
T Consensus 308 ~~~~~~~-----~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i 382 (461)
T PHA03211 308 CFARGSW-----STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRII 382 (461)
T ss_pred eeccccc-----ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHH
Confidence 8653221 111223457999999999999999999999999999999999988765332211 11 111111
Q ss_pred HHh-C-CcchhhccChhhhhhhhcc--CCCCCCCCCC--ccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 937 MKA-L-PQRVIEIVDPLLLLEVRTN--NSKNPCGDGR--GGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 937 ~~~-~-~~~~~~~~d~~l~~~~~~~--~~~~p~~~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
... . ...+.......+...+... ....|..... .........+.+++.+||+.||.+|| |+.|+++.
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RP-sa~elL~h 455 (461)
T PHA03211 383 RQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRP-SAAELLRL 455 (461)
T ss_pred HhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCc-CHHHHhhC
Confidence 110 0 0111111111122221110 0111111000 00111223578899999999999999 99999874
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=314.90 Aligned_cols=258 Identities=26% Similarity=0.406 Sum_probs=201.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCC---CEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEG---GLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
++|++.+.||+|+||.||+|++..+ +..||+|.++... ....+.+.+|+.++++++||||+++++++... +
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS-----K 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----C
Confidence 5788999999999999999987533 3479999987543 33456789999999999999999999998765 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++||
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDG-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 68999999999999999976532 379999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.+........ .........++..|+|||.+.+..++.++|||||||++||+++ |..||...... ........
T Consensus 151 g~~~~~~~~~~----~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~ 224 (267)
T cd05066 151 GLSRVLEDDPE----AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEE 224 (267)
T ss_pred Ccccccccccc----eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhC
Confidence 99986532210 0111112234568999999998889999999999999999886 99998653211 11111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.. . .|.. ..++..+.+++.+|++.+|.+|| ++.++++.|+++
T Consensus 225 ~~--------~-------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp-~~~~i~~~l~~~ 266 (267)
T cd05066 225 GY--------R-------------LPAP------MDCPAALHQLMLDCWQKDRNERP-KFEQIVSILDKL 266 (267)
T ss_pred CC--------c-------------CCCC------CCCCHHHHHHHHHHcccCchhCC-CHHHHHHHHHhh
Confidence 00 0 0000 11244578999999999999999 999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=332.61 Aligned_cols=207 Identities=26% Similarity=0.361 Sum_probs=176.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++..++||+|+++++.+.+. +.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-----~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK-----RN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----CE
Confidence 36889999999999999999999899999999997432 33456778899999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... +++..+..++.|++.||+|||+. ||+||||||+||+++.++++||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~------l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDT------LSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 8999999999999999976543 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCC----------------------------CCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHH
Q 001738 861 LAKFLYTCQVDDV----------------------------ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912 (1019)
Q Consensus 861 ~a~~~~~~~~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil 912 (1019)
++........... ..........||+.|+|||++.+..++.++||||+||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 9875422110000 000111245799999999999999999999999999999
Q ss_pred HHHHhCCCCCCC
Q 001738 913 LEMFIRKRPTDS 924 (1019)
Q Consensus 913 ~ell~g~~Pf~~ 924 (1019)
|||++|+.||..
T Consensus 227 yel~tG~~Pf~~ 238 (360)
T cd05627 227 YEMLIGYPPFCS 238 (360)
T ss_pred eecccCCCCCCC
Confidence 999999999975
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=321.75 Aligned_cols=262 Identities=21% Similarity=0.298 Sum_probs=205.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++... ...+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEEE
Confidence 57888999999999999999999899999999986543 33457789999999999999999999999876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... +++..+..++.+++.|+.|||+.. +++||||||+||+++.++.++|+|||++
T Consensus 80 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGGP------IPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEecCCCCCHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 99999999999999876542 899999999999999999999732 8999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ......|+..|+|||++.+..++.++|||||||++|++++|+.||.......... ..+.
T Consensus 152 ~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~------~~~~ 216 (284)
T cd06620 152 GELINS---------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ------DDPM 216 (284)
T ss_pred cchhhh---------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh------hhhh
Confidence 654211 1123468999999999988889999999999999999999999997543221100 0000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
...+.+....... + ......++...+.+++.+|++.||++|| |++|++++.
T Consensus 217 ~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~li~~~l~~dp~~Rp-t~~e~~~~~ 267 (284)
T cd06620 217 GILDLLQQIVQEP--------P---PRLPSSDFPEDLRDFVDACLLKDPTERP-TPQQLCAMP 267 (284)
T ss_pred HHHHHHHHHhhcc--------C---CCCCchhcCHHHHHHHHHHhcCCcccCc-CHHHHhcCc
Confidence 0111111100000 0 0001112355688999999999999999 999999864
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=313.13 Aligned_cols=254 Identities=25% Similarity=0.446 Sum_probs=201.1
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.++||+|+||.||+|... +++.||+|.+..... ..+++.+|+.++++++|||++++++++.. +..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcE
Confidence 357899999999999999999976 678899999874433 34678899999999999999999998643 4579
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 99999999999999876442 2489999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... ........++..|+|||+..+..++.++||||||+++||+++ |+.||...... ...+.......
T Consensus 150 ~~~~~~~------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~ 221 (260)
T cd05067 150 RLIEDNE------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYR 221 (260)
T ss_pred eecCCCC------cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCC
Confidence 7653211 111123345778999999988889999999999999999999 99999753211 11111100000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
.+.. .....++.+++.+|++.+|++|| +++++.+.|+.
T Consensus 222 ---------------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp-~~~~l~~~l~~ 259 (260)
T cd05067 222 ---------------------MPRP------DNCPEELYELMRLCWKEKPEERP-TFEYLRSVLED 259 (260)
T ss_pred ---------------------CCCC------CCCCHHHHHHHHHHccCChhhCC-CHHHHHHHhhc
Confidence 0000 01234689999999999999999 99999998874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=317.27 Aligned_cols=274 Identities=27% Similarity=0.376 Sum_probs=203.2
Q ss_pred CCCCCCceeccccEEEEEEEe----CCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.|++.+.||+|+||.||+|++ ..++..||+|.++... ....+.+.+|++++++++|||++++++++...+. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG---N 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC---C
Confidence 478899999999999999974 3468899999987543 3345678999999999999999999998876422 4
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCC
Confidence 67899999999999999965431 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
|+++....... .........++..|+|||+..+..++.++|||||||++|||++++.|+...... .......
T Consensus 154 g~~~~~~~~~~----~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~- 225 (284)
T cd05079 154 GLTKAIETDKE----YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGP- 225 (284)
T ss_pred ccccccccCcc----ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhccc-
Confidence 99986532211 011112345677899999998888999999999999999999988775331110 0000000
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.... ...+... .... .....|. ...+...+.+++.+||+.+|++|| |++|+++.++++
T Consensus 226 ~~~~--~~~~~~~-~~~~-~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp-t~~~il~~l~~~ 283 (284)
T cd05079 226 THGQ--MTVTRLV-RVLE-EGKRLPR------PPNCPEEVYQLMRKCWEFQPSKRT-TFQNLIEGFEAI 283 (284)
T ss_pred cccc--ccHHHHH-HHHH-cCccCCC------CCCCCHHHHHHHHHHccCCcccCc-CHHHHHHHHHhh
Confidence 0000 0000000 0000 0000010 012355789999999999999999 999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=313.26 Aligned_cols=254 Identities=24% Similarity=0.377 Sum_probs=200.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch---------hhHHHHHHHHHHhcCCCCCcceEEEEEecCCC
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG---------AFKSFVAECEALRNIRHRNLIKIITICSSIDS 775 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 775 (1019)
+|.+.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+.+|+.++++++||||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-- 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence 478889999999999999999888999999988643221 235678999999999999999999998776
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
...++||||+++++|.+++..... +++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|
T Consensus 79 ---~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 79 ---DHLNIFLEYVPGGSVAALLNNYGA------FEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ---CccEEEEEecCCCCHHHHHHhccC------ccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 678999999999999999976543 88999999999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
|+|||.++......... ..........|+..|+|||.+.+..++.++||||+||++|+|++|+.||..... . ..
T Consensus 147 l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~-~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLST-KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----L-QA 220 (267)
T ss_pred ecccCCCcccccccccC-CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----H-HH
Confidence 99999998664221111 011112234688999999999988899999999999999999999999975311 1 11
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... ....+.+. ......+.+++.+||+.||.+|| +++|+++
T Consensus 221 ~~~~~-----~~~~~~~~-------------------~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~ 263 (267)
T cd06628 221 IFKIG-----ENASPEIP-------------------SNISSEAIDFLEKTFEIDHNKRP-TAAELLK 263 (267)
T ss_pred HHHHh-----ccCCCcCC-------------------cccCHHHHHHHHHHccCCchhCc-CHHHHhh
Confidence 11000 00000000 11245578999999999999999 9999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=348.83 Aligned_cols=260 Identities=20% Similarity=0.279 Sum_probs=200.5
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
...++|++.+.||+|+||+||+|++..++..||+|++... .......+..|+.++++++||||++++++|.....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~--- 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN--- 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC---
Confidence 4457899999999999999999999999999999998743 23345678899999999999999999998865432
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCC----CCeEeeccCCCceEeCC----
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQ----PPIIHGDLKPSNVLLDH---- 850 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~----~~ivH~Dlkp~NIll~~---- 850 (1019)
...|+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 5689999999999999999764321 1238999999999999999999998510 25999999999999964
Q ss_pred -------------CCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHH
Q 001738 851 -------------DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEM 915 (1019)
Q Consensus 851 -------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~el 915 (1019)
.+.+||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~--------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIE--------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred cccccccccccCCCCceEEccCCcccccccc--------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 235899999999754221 11234578999999999854 4588999999999999999
Q ss_pred HhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchh
Q 001738 916 FIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT 995 (1019)
Q Consensus 916 l~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 995 (1019)
++|+.||..... ........... +. .|. ......+.+++..||+.+|.+||
T Consensus 237 LTGk~PF~~~~~----~~qli~~lk~~-------p~-----------lpi-------~~~S~eL~dLI~~~L~~dPeeRP 287 (1021)
T PTZ00266 237 CSGKTPFHKANN----FSQLISELKRG-------PD-----------LPI-------KGKSKELNILIKNLLNLSAKERP 287 (1021)
T ss_pred HHCCCCCCcCCc----HHHHHHHHhcC-------CC-----------CCc-------CCCCHHHHHHHHHHhcCChhHCc
Confidence 999999964211 11111110000 00 000 01134578999999999999999
Q ss_pred HhHHHHHH
Q 001738 996 LEMRNVVA 1003 (1019)
Q Consensus 996 ~s~~evl~ 1003 (1019)
++.|++.
T Consensus 288 -Sa~QlL~ 294 (1021)
T PTZ00266 288 -SALQCLG 294 (1021)
T ss_pred -CHHHHhc
Confidence 9999984
|
|
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=315.13 Aligned_cols=250 Identities=25% Similarity=0.339 Sum_probs=202.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||.|+||.||+|++..+++.||+|++.... ......+.+|+++++.++|+|++++++++... ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeEE
Confidence 46889999999999999999999899999999987543 34456788999999999999999999998766 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||+++++|.+++... ++++..++.++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999999765 289999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
+...... .......+++.|+|||...+..++.++|||||||++|||++|+.||...... .........
T Consensus 146 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~--- 213 (274)
T cd06609 146 GQLTSTM-------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVLFLIPKN--- 213 (274)
T ss_pred eeecccc-------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHHHHhhhc---
Confidence 8763221 1223356788999999999888999999999999999999999999653211 111000000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..+.+ .. . .....+.+++.+||..+|++|| |++++++.
T Consensus 214 -----~~~~~--------------~~-~---~~~~~~~~~l~~~l~~~p~~Rp-t~~~il~~ 251 (274)
T cd06609 214 -----NPPSL--------------EG-N---KFSKPFKDFVSLCLNKDPKERP-SAKELLKH 251 (274)
T ss_pred -----CCCCC--------------cc-c---ccCHHHHHHHHHHhhCChhhCc-CHHHHhhC
Confidence 00000 00 0 0234578899999999999999 99999773
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=315.86 Aligned_cols=263 Identities=24% Similarity=0.402 Sum_probs=206.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCE----EEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGL----LVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
++|++.+.||+|+||.||+|.+..+|. .||+|....... ....++.+|+.++++++|||++++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578899999999999999999865554 689998875543 345678899999999999999999999875
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 357899999999999999986542 289999999999999999999998 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||.++...... .........++..|+|||......++.++|||||||++||+++ |+.||..... ........
T Consensus 153 fg~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~ 225 (279)
T cd05057 153 FGLAKLLDVDE-----KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLE 225 (279)
T ss_pred CcccccccCcc-----cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHh
Confidence 99998653211 1111112234678999999988889999999999999999998 9999975321 11111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhhhhh
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFLSV 1015 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~~~~ 1015 (1019)
.. . ..+.. ..+...+.+++.+||..+|.+|| ++.++++.|+++.....++
T Consensus 226 ~~---~------------------~~~~~------~~~~~~~~~~~~~~l~~~p~~Rp-~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05057 226 KG---E------------------RLPQP------PICTIDVYMVLVKCWMIDAESRP-TFKELINEFSKMARDPQRY 275 (279)
T ss_pred CC---C------------------CCCCC------CCCCHHHHHHHHHHcCCChhhCC-CHHHHHHHHHHHHhCCcce
Confidence 00 0 00000 01233578899999999999999 9999999999987655443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=319.15 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=201.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
+.|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++|||++++++++... ...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD-----GKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-----CeEEE
Confidence 5799999999999999999999988999999999877666677889999999999999999999998765 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|..++.+... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 87 v~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDR-----GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999988765432 289999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
..... ........+++.|+|||++. ...++.++|||||||++|||++|..||..... .+....
T Consensus 159 ~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~ 226 (292)
T cd06644 159 KNVKT-------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLK 226 (292)
T ss_pred ecccc-------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHH
Confidence 53211 11122346788999999874 34578899999999999999999999865321 111111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... .+.. . ........+.+++.+||+.+|++|| +++|+++
T Consensus 227 ~~~~~-----~~~~--------------~---~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~ 268 (292)
T cd06644 227 IAKSE-----PPTL--------------S---QPSKWSMEFRDFLKTALDKHPETRP-SAAQLLE 268 (292)
T ss_pred HhcCC-----CccC--------------C---CCcccCHHHHHHHHHHhcCCcccCc-CHHHHhc
Confidence 10000 0000 0 0011234578999999999999999 9999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=321.53 Aligned_cols=204 Identities=22% Similarity=0.305 Sum_probs=164.4
Q ss_pred CCceeccccEEEEEEEeC--CCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 709 SNMIGQGSFGFVYRGILG--EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
.++||+|+||+||+|++. .+++.||+|.++... ....+.+|++++++++||||+++++++..... ...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHAD---RKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCC---cEEEEEEe
Confidence 468999999999999965 366899999986432 22457889999999999999999998865433 56899999
Q ss_pred eccCCCHHHHHhccCCC---CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe----CCCCCeEEeee
Q 001738 787 YMQNGSLEEWLHHSNDQ---HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDF 859 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Df 859 (1019)
|++ ++|.+++...... .....+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 985 5898887643321 1123489999999999999999999999 99999999999999 45679999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
|+|+....... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 157 G~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99986532211 1122234678999999999876 45899999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=314.92 Aligned_cols=249 Identities=24% Similarity=0.316 Sum_probs=203.5
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+.|+..+.||.|+||.||+|.+..+++.||+|+++... ....+.+.+|+++++++.||||+++++++... ...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-----TKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----CEEE
Confidence 46888899999999999999998889999999987543 34457788999999999999999999999876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++.... +++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++
T Consensus 79 lv~e~~~~~~L~~~i~~~~-------l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAGP-------FDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 9999999999999987533 78899999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......++..|+|||++.+..++.++|||||||++|||++|..||....... .. .. ...
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~---~~-~~~ 215 (277)
T cd06640 149 GQLTDTQ-------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--VL---FL-IPK 215 (277)
T ss_pred eeccCCc-------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--Hh---hh-hhc
Confidence 7653211 11223467889999999988889999999999999999999999987532110 00 00 000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. ........+...+.+++.+||+.+|++|| +++|+++.
T Consensus 216 ~-----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~~ 253 (277)
T cd06640 216 N-----------------------NPPTLTGEFSKPFKEFIDACLNKDPSFRP-TAKELLKH 253 (277)
T ss_pred C-----------------------CCCCCchhhhHHHHHHHHHHcccCcccCc-CHHHHHhC
Confidence 0 00111123456789999999999999999 99999876
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=325.87 Aligned_cols=202 Identities=26% Similarity=0.340 Sum_probs=173.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|+.+++.++|+||+++++++.+. ++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE-----NN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC-----Ce
Confidence 4799999999999999999999989999999999742 223345688999999999999999999999876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 8999999999999999975332 289999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-----SEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 148 ~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADG------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCC------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 987643211 111122468999999999863 4578899999999999999999999964
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=312.13 Aligned_cols=253 Identities=27% Similarity=0.468 Sum_probs=198.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||.||+|.+.. +..||+|.+..... ..+.+.+|++++++++|||++++++++.. ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcC-CceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcEE
Confidence 568899999999999999999864 45699998864432 34678899999999999999999988743 34689
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.++++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred EEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 9999999999999976432 2378999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......++..|+|||...+..++.++|||||||++|||++ |..||.+.... ...+.......
T Consensus 151 ~~~~~~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~- 221 (260)
T cd05069 151 LIEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYR- 221 (260)
T ss_pred EccCCcc------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-
Confidence 6532111 11122345778999999988889999999999999999999 89998753211 11111110000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
+ +.. ......+.+++.+||+.||++|| ++++|++.|++
T Consensus 222 -------~-------------~~~------~~~~~~~~~li~~~l~~~p~~Rp-~~~~i~~~l~~ 259 (260)
T cd05069 222 -------M-------------PCP------QGCPESLHELMKLCWKKDPDERP-TFEYIQSFLED 259 (260)
T ss_pred -------C-------------CCC------cccCHHHHHHHHHHccCCcccCc-CHHHHHHHHhc
Confidence 0 000 11245688999999999999999 99999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=337.61 Aligned_cols=357 Identities=26% Similarity=0.397 Sum_probs=275.3
Q ss_pred eeeEEeeeccCCC-CccccCcCCCcccceeccCCCccCCCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhh
Q 001738 76 RVTKLYLRNQSIG-GILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLA 154 (1019)
Q Consensus 76 ~v~~l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~ 154 (1019)
-|..+|+++|.++ +..|..+..++.++.|-|...++. .+|++++.|.+|++|.+++|++. ++-..++.|+.|+.+.+
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 4788999999998 578889999999999999999998 99999999999999999999998 77778899999999999
Q ss_pred cccccccc-ccccccccccccceeecccccccCCCCccccCccccceeeecccccccCCCc-cccCccccceeecccccc
Q 001738 155 HGNNLVGQ-IAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPN-TLGQLRNSFYLNIAGNQF 232 (1019)
Q Consensus 155 ~~n~~~~~-i~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~l~~n~l 232 (1019)
..|++... ||..++ .+..|+.|||++|+++ ..|..+.+-.++-+|+||+|+|. .+|. -|.+|+.|-+||||+|++
T Consensus 86 R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hccccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchh
Confidence 99999766 777777 6889999999999999 88999999999999999999999 5665 456899999999999999
Q ss_pred CCCCCCcccccccccceeccCCcccC----CCCccccccccccceEEecccccC-CCCCCcccCCCcCCeEecCCCcCCC
Q 001738 233 SGNVPPSIYNLSSLELLYLRGNRLIG----SLPIDIGLTLPKLTNFVIAENNFS-GPIPNSFSNTSNLVMLDLNLNLFSG 307 (1019)
Q Consensus 233 ~~~~p~~l~~l~~L~~L~L~~N~l~~----~lp~~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (1019)
. .+|+.+..+..|++|+|++|.+.- .+| .+.+|+.|.+++.+-+ ..+|.++..+.+|..+|+|.|.+.
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-----smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp- 235 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLP-----SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP- 235 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCc-----cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-
Confidence 8 789999999999999999997641 233 4667888888877653 467888999999999999999998
Q ss_pred CCCcccccccCcccccccCccCCCCCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCcccccc
Q 001738 308 KVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGT 387 (1019)
Q Consensus 308 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~ 387 (1019)
.+|..+.++.+|+.|+|++|+|+.+... ...-.+|++|+++.|+++ .
T Consensus 236 ~vPecly~l~~LrrLNLS~N~iteL~~~-------~~~W~~lEtLNlSrNQLt--------------------------~ 282 (1255)
T KOG0444|consen 236 IVPECLYKLRNLRRLNLSGNKITELNMT-------EGEWENLETLNLSRNQLT--------------------------V 282 (1255)
T ss_pred cchHHHhhhhhhheeccCcCceeeeecc-------HHHHhhhhhhccccchhc--------------------------c
Confidence 7899999999999999999988865432 122346677777777766 4
Q ss_pred CcccccCCCCcCeEeecccccC-CCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCccc
Q 001738 388 IPSGIGNLVNLNGFGIDLNQLT-GTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGN 466 (1019)
Q Consensus 388 ~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 466 (1019)
+|++++.++.|+.|.+.+|+++ .-+|..++++.+|+++..++|.++ .+|+.++.+.+|+.|.|+.|++- .+|+++.-
T Consensus 283 LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHl 360 (1255)
T KOG0444|consen 283 LPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHL 360 (1255)
T ss_pred chHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhh
Confidence 4455555555555555555554 234555555555555555555555 55555555555555555555554 45555555
Q ss_pred ccccchhcccccc
Q 001738 467 CRSLLSLNVSQNK 479 (1019)
Q Consensus 467 l~~L~~L~L~~N~ 479 (1019)
++.|+.||+..|.
T Consensus 361 L~~l~vLDlreNp 373 (1255)
T KOG0444|consen 361 LPDLKVLDLRENP 373 (1255)
T ss_pred cCCcceeeccCCc
Confidence 5555555555554
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=312.40 Aligned_cols=254 Identities=30% Similarity=0.476 Sum_probs=201.2
Q ss_pred CceeccccEEEEEEEeCCC---CEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEG---GLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|.+... +..||+|+++..... ..+.+.+|++.++.++|+|++++++++... ...++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-----EPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC-----CceEEEE
Confidence 4799999999999999865 889999999765433 367889999999999999999999998874 6789999
Q ss_pred eeccCCCHHHHHhccCCC---CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 786 EYMQNGSLEEWLHHSNDQ---HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
||+++++|.+++...... .....+++..++.++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999875210 0013489999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
........ ........++..|+|||...+..++.++||||+||++|||++ |..||..... ....+....
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~--- 222 (262)
T cd00192 153 RDVYDDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK--- 222 (262)
T ss_pred cccccccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc---
Confidence 87643221 112234567889999999988889999999999999999999 6999976411 111111110
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.. . + .....+...+.+++.+||+.+|.+|| |++|+++.|+
T Consensus 223 ~~-----~--------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~~l~~~l~ 262 (262)
T cd00192 223 GY-----R--------------L-----PKPEYCPDELYELMLSCWQLDPEDRP-TFSELVERLE 262 (262)
T ss_pred CC-----C--------------C-----CCCccCChHHHHHHHHHccCCcccCc-CHHHHHHhhC
Confidence 00 0 0 00011245688999999999999999 9999998763
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=334.26 Aligned_cols=276 Identities=21% Similarity=0.184 Sum_probs=199.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeC--CCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILG--EGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..+|++.+.||+|+||.||+|... ..++.||+|.+... +...+|++++++++||||+++++++... ..
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~-----~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWK-----ST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeC-----CE
Confidence 457999999999999999999764 34678999988643 3346899999999999999999998765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+|||++. ++|.+++.... .+++..++.++.||+.||+|||++ +||||||||+||+++.++.+||+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 899999995 68988885433 389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc--ccHHHHHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG--LTIHEFAMK 938 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~--~~~~~~~~~ 938 (1019)
+++...... .........||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... ..+......
T Consensus 231 ~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~ 305 (392)
T PHA03207 231 AACKLDAHP-----DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRC 305 (392)
T ss_pred cccccCccc-----ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHH
Confidence 997653221 1122234679999999999999999999999999999999999999997643321 111111111
Q ss_pred h--CCcchhhccChhhhhhhhc-cCCCCCCCCCCccH--HHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 A--LPQRVIEIVDPLLLLEVRT-NNSKNPCGDGRGGI--EECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~--~~~~~~~~~d~~l~~~~~~-~~~~~p~~~~~~~~--~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. .+..+.......+...+.. ....+|....+... ......+.+++.+|+..||++|| |+.|++..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rp-sa~e~l~~ 375 (392)
T PHA03207 306 MQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRP-SAQDILSL 375 (392)
T ss_pred hccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCC-CHHHHhhC
Confidence 0 0100100000000000000 00011111000000 01234577899999999999999 99999875
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=315.53 Aligned_cols=267 Identities=23% Similarity=0.368 Sum_probs=207.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeCC----CCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGE----GGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
.++|++.+.||+|+||.||+|.+.. .+..||+|++... .....+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--- 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG--- 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 4678999999999999999999874 2688999988643 2334567889999999999999999999876542
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCC--CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQ--HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
...++++||+++++|.+++...... .....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+|
T Consensus 82 -~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 82 -EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred -CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEE
Confidence 4578999999999999998764321 1113489999999999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~ 934 (1019)
|+|||+++.+..... ........++..|+|||++.+..++.++|||||||++||+++ |+.||..... .....
T Consensus 158 l~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~ 230 (280)
T cd05043 158 ITDNALSRDLFPMDY-----HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAA 230 (280)
T ss_pred ECCCCCcccccCCce-----EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHH
Confidence 999999975532211 011112345778999999988889999999999999999999 9999965311 11111
Q ss_pred HHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 935 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
...... . +. ....+...+.+++.+||+.||++|| |+.|+++.|+++.+.
T Consensus 231 ~~~~~~--------~--------------~~-----~~~~~~~~~~~li~~~l~~~p~~Rp-s~~~~~~~l~~~~~~ 279 (280)
T cd05043 231 YLKDGY--------R--------------LA-----QPINCPDELFAVMACCWALDPEERP-SFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHcCC--------C--------------CC-----CCCcCCHHHHHHHHHHcCCChhhCC-CHHHHHHHHHHHHhc
Confidence 111000 0 00 0011245678999999999999999 999999999988653
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=312.39 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=196.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-----chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-----KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE--- 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC---
Confidence 47899999999999999999998889999999986432 2234568899999999999999999998865422
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++++||+++++|.+++..... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYGA------LTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 567899999999999999976542 78999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||++........ .........++..|+|||.+.+..++.++||||+||++|||++|+.||...... +....
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-----~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICM----SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-----AAIFK 220 (266)
T ss_pred CCCccccccccc----cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-----HHHHH
Confidence 999875422110 111112345789999999999888999999999999999999999999753111 11111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... ..+.+ + ......+.+++ +||..+|++|| +++||++
T Consensus 221 ~~~~~----~~~~~----------------~---~~~~~~~~~li-~~~~~~p~~Rp-~~~eil~ 260 (266)
T cd06651 221 IATQP----TNPQL----------------P---SHISEHARDFL-GCIFVEARHRP-SAEELLR 260 (266)
T ss_pred HhcCC----CCCCC----------------c---hhcCHHHHHHH-HHhcCChhhCc-CHHHHhc
Confidence 00000 00000 0 11123345555 68889999999 9999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=315.69 Aligned_cols=258 Identities=22% Similarity=0.368 Sum_probs=203.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCC---CEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEG---GLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.+|++.+.||+|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 4688899999999999999987533 3579999887554 3455688999999999999999999998865 3
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 46899999999999999976432 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+++....... .......++..|+|||.+.+..++.++|||||||++||+++ |..||....... .......
T Consensus 152 g~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~ 223 (270)
T cd05056 152 GLSRYLEDESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIEN 223 (270)
T ss_pred ceeeecccccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHc
Confidence 99976532211 11112234578999999988889999999999999999986 999996532211 1111000
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
.. .. ..| .++...+.+++.+|+..+|.+|| |+.++++.|++++..
T Consensus 224 ---~~-----~~-----------~~~--------~~~~~~~~~li~~~l~~~P~~Rp-t~~~~~~~l~~~~~~ 268 (270)
T cd05056 224 ---GE-----RL-----------PMP--------PNCPPTLYSLMTKCWAYDPSKRP-RFTELKAQLSDILQE 268 (270)
T ss_pred ---CC-----cC-----------CCC--------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHHHhc
Confidence 00 00 000 12245678999999999999999 999999999998754
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=318.77 Aligned_cols=252 Identities=22% Similarity=0.285 Sum_probs=197.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEee--cccchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..|++.+.||+||.++||++... +.+.||+|.+. ..+......|.+|+..|.+++ |.+||++++|-... ++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-----~~ 434 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-----GY 434 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC-----ce
Confidence 47999999999999999999986 45566776553 334556778999999999995 99999999987765 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||- ..+|..+++..... .+...++.+.+|++.|+.++|.+ ||||.||||.|+++ -.|.+||+|||
T Consensus 435 lYmvmE~G-d~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDFG 504 (677)
T KOG0596|consen 435 LYMVMECG-DIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDFG 504 (677)
T ss_pred EEEEeecc-cccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeeec
Confidence 99999965 66999999887642 33337888999999999999999 99999999999998 46799999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCC-----------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-----------EASMAGDVYSFGILLLEMFIRKRPTDSMFNDG 929 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~ 929 (1019)
.|.-+..+. +.......+||+.||+||.+... +.++++||||+|||+|+|+.|+.||.....
T Consensus 505 IA~aI~~DT-----TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-- 577 (677)
T KOG0596|consen 505 IANAIQPDT-----TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-- 577 (677)
T ss_pred hhcccCccc-----cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--
Confidence 998764433 44455567999999999987643 256899999999999999999999965211
Q ss_pred ccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 930 LTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. -..+..+.+|.-..++. . ... ..++.++|..|+..||++|| |+.|+++
T Consensus 578 --~--------~aKl~aI~~P~~~Iefp-------~--~~~-----~~~li~~mK~CL~rdPkkR~-si~eLLq 626 (677)
T KOG0596|consen 578 --Q--------IAKLHAITDPNHEIEFP-------D--IPE-----NDELIDVMKCCLARDPKKRW-SIPELLQ 626 (677)
T ss_pred --H--------HHHHHhhcCCCcccccc-------C--CCC-----chHHHHHHHHHHhcCcccCC-CcHHHhc
Confidence 0 11233444543332331 1 111 12379999999999999999 9999986
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=313.29 Aligned_cols=250 Identities=24% Similarity=0.340 Sum_probs=202.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||.||+|++..+++.||+|.+..... .+++.+|++++++++||||+++++++... ...|+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKN-----TDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CcEEE
Confidence 689999999999999999999988899999999875533 57899999999999999999999998876 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
++||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 999999999999997543 2389999999999999999999999 99999999999999999999999999998
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
...... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||....... .... ....
T Consensus 148 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-----~~~~-~~~~ 214 (256)
T cd06612 148 QLTDTM-------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-----AIFM-IPNK 214 (256)
T ss_pred hcccCc-------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-----hhhh-hccC
Confidence 653211 11223457889999999988899999999999999999999999997532110 0000 0000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..+. ..........+.+++.+||+.||++|| |++||++
T Consensus 215 ----~~~~-----------------~~~~~~~~~~~~~~i~~~l~~~P~~Rp-s~~~il~ 252 (256)
T cd06612 215 ----PPPT-----------------LSDPEKWSPEFNDFVKKCLVKDPEERP-SAIQLLQ 252 (256)
T ss_pred ----CCCC-----------------CCchhhcCHHHHHHHHHHHhcChhhCc-CHHHHhc
Confidence 0000 000112234678999999999999999 9999976
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=319.70 Aligned_cols=275 Identities=28% Similarity=0.369 Sum_probs=206.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCC----CCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGE----GGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
++|++.+.||+|+||.||+|++.. +++.||||+++..... ..+.+.+|+++++++.||||+++++++.....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~--- 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG--- 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC---
Confidence 467888999999999999998643 4789999999755443 46789999999999999999999998876422
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
.+.++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 578999999999999999976542 389999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||.+........ .........++..|+|||...+..++.++||||||+++|||++|+.|+......... .+..
T Consensus 153 fg~~~~~~~~~~----~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~ 225 (284)
T cd05038 153 FGLAKVLPEDKD----YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGI 225 (284)
T ss_pred cccccccccCCc----ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---cccc
Confidence 999986532211 011111234466799999998889999999999999999999999998653221111 0000
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.........+...+... ...+ ....+..++.+++.+||+.+|++|| |++||+++|+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~li~~cl~~~p~~Rp-t~~ei~~~l~~i 283 (284)
T cd05038 226 AQGQMIVTRLLELLKEG-----ERLP------RPPSCPDEVYDLMKLCWEAEPQDRP-SFADLILIVDRL 283 (284)
T ss_pred ccccccHHHHHHHHHcC-----CcCC------CCccCCHHHHHHHHHHhccChhhCC-CHHHHHHHHhhc
Confidence 00000000000000000 0001 0112346789999999999999999 999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=317.23 Aligned_cols=272 Identities=22% Similarity=0.291 Sum_probs=202.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++|||++++++++... ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK-----RKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-----CEE
Confidence 47899999999999999999999889999999986432 22345678999999999999999999998876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++++++..+...... +++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPRG------VPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCCC------CCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 999999999988888765432 89999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+........ ......++..|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. ........
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~ 217 (286)
T cd07847 147 ARILTGPGD-------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ--LYLIRKTL 217 (286)
T ss_pred ceecCCCcc-------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHh
Confidence 986532210 1123457889999999876 4578999999999999999999999975432111 11111111
Q ss_pred C---cchhhccChhhhhhhhccCCCCCCCCCCccHH----HHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 P---QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIE----ECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~---~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. ....+..+..- +. .....|........+ .....+.+++.+||+.+|++|| ++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~eil~ 282 (286)
T cd07847 218 GDLIPRHQQIFSTNQ---FF-KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL-SCEELLE 282 (286)
T ss_pred CCCChHHhhhccccc---cc-ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccC-CHHHHhc
Confidence 0 01111111000 00 000011111111111 1245678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=320.51 Aligned_cols=276 Identities=20% Similarity=0.261 Sum_probs=201.3
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.+.||+|+||.||+|++..+++.||+|.++... ......+.+|+.++++++||||+++++++... ...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC-----CeE
Confidence 357999999999999999999998889999999987543 22345677899999999999999999999876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred EEEEeccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 99999996 599988876432 278999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+...... ........+++.|+|||++.+. .++.++||||+||++|||++|++||..... ...........
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~--~~~~~~~~~~~ 221 (301)
T cd07873 151 ARAKSIP-------TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV--EEQLHFIFRIL 221 (301)
T ss_pred hhccCCC-------CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHc
Confidence 8753211 1112234568999999987654 578899999999999999999999975322 11112222221
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCC---CccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDG---RGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...........+..+.. .....|.... ..........+.+++.+|++.||.+|| |++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~-t~~eil~ 285 (301)
T cd07873 222 GTPTEETWPGILSNEEF-KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI-SAEEAMK 285 (301)
T ss_pred CCCChhhchhhhccccc-cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCc-CHHHHhc
Confidence 11111111110000000 0000000000 000012244578999999999999999 9999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=312.65 Aligned_cols=254 Identities=28% Similarity=0.402 Sum_probs=195.8
Q ss_pred CceeccccEEEEEEEeCCCCE--EEEEEEeecc-cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGL--LVAVKVLNLT-RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|++.+++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++... ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEEE
Confidence 468999999999999987765 5688888643 234456788999999999 799999999998775 5679999
Q ss_pred eeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeE
Q 001738 786 EYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 855 (1019)
||+++|+|.+++...... .....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999764321 1123488999999999999999999999 999999999999999999999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~ 934 (1019)
++|||++..... .........+..|+|||+..+..++.++|||||||++|||++ |..||..... .+
T Consensus 153 l~dfgl~~~~~~--------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~ 219 (270)
T cd05047 153 IADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AE 219 (270)
T ss_pred ECCCCCccccch--------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----HH
Confidence 999999853211 001111233567999999988889999999999999999997 9999865321 11
Q ss_pred HHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 935 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
..... +.. .. + +....+...+.+++.+||+.+|.+|| |++|+++.|+.+.
T Consensus 220 ~~~~~-~~~--------~~----------~-----~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~~il~~l~~~~ 269 (270)
T cd05047 220 LYEKL-PQG--------YR----------L-----EKPLNCDDEVYDLMRQCWREKPYERP-SFAQILVSLNRML 269 (270)
T ss_pred HHHHH-hCC--------CC----------C-----CCCCcCCHHHHHHHHHHcccChhhCC-CHHHHHHHHHHhh
Confidence 11111 000 00 0 00011234578999999999999999 9999999998774
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=310.04 Aligned_cols=252 Identities=22% Similarity=0.328 Sum_probs=200.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|++|.||+|.+..+++.||+|.+.... ....+.+.+|++++++++|+|++++++.+...+ ...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED----GLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC----CEEE
Confidence 5889999999999999999998889999999986432 234567889999999999999999998765431 4678
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 99999999999999986432 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......|++.|+|||+..+..++.++||||+||++|||++|+.||.... ...........
T Consensus 150 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~ 217 (257)
T cd08223 150 RVLENQC-------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRIIEG 217 (257)
T ss_pred EEecccC-------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhc
Confidence 8653211 12223567899999999999899999999999999999999999986421 11111111100
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. +.. .......+.+++.+|++.+|++|| |+.|+++.
T Consensus 218 ~~-----~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~l~~ 254 (257)
T cd08223 218 KL-----PPM-------------------PKDYSPELGELIATMLSKRPEKRP-SVKSILRQ 254 (257)
T ss_pred CC-----CCC-------------------ccccCHHHHHHHHHHhccCcccCC-CHHHHhcC
Confidence 00 000 011234678999999999999999 99999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=319.48 Aligned_cols=270 Identities=22% Similarity=0.235 Sum_probs=206.8
Q ss_pred cCHHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEec
Q 001738 694 VSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSS 772 (1019)
Q Consensus 694 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 772 (1019)
+...++..+.++|++.+.||+|+||.||+|....+++.+|+|++..... ....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3345556678899999999999999999999988999999999864322 235677899999998 79999999999886
Q ss_pred CCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC
Q 001738 773 IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM 852 (1019)
Q Consensus 773 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 852 (1019)
.+.......++||||+++++|.++++..... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 6443335789999999999999988643211 22389999999999999999999999 999999999999999999
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-----EASMAGDVYSFGILLLEMFIRKRPTDSMFN 927 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~ell~g~~Pf~~~~~ 927 (1019)
.+||+|||.+....... .......|+..|+|||.+... .++.++||||+||++|||++|+.||.....
T Consensus 166 ~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 166 GVKLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred CEEEeecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 99999999987643211 111234678999999987543 368899999999999999999999965321
Q ss_pred CcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. +..............+ .++....+.+++.+||+.+|++|| ++.|+++.
T Consensus 239 ~-----~~~~~~~~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rp-s~~~il~~ 287 (291)
T cd06639 239 V-----KTLFKIPRNPPPTLLH----------------------PEKWCRSFNHFISQCLIKDFEARP-SVTHLLEH 287 (291)
T ss_pred H-----HHHHHHhcCCCCCCCc----------------------ccccCHHHHHHHHHHhhcChhhCc-CHHHHhcC
Confidence 1 1111100000000000 011234588999999999999999 99999763
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=318.73 Aligned_cols=254 Identities=23% Similarity=0.361 Sum_probs=202.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.......+.+.+|++++++++|||++++++++... ...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-----NKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-----CeEE
Confidence 35799999999999999999999888999999999876666667889999999999999999999998875 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 99999999999999876432 389999999999999999999999 9999999999999999999999999988
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
...... ........+++.|+|||.+. +..++.++||||+||++|||++|+.||...... +...
T Consensus 151 ~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-----~~~~ 218 (280)
T cd06611 151 AKNKST-------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-----RVLL 218 (280)
T ss_pred hhhccc-------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-----HHHH
Confidence 654211 11222356899999999874 345788999999999999999999999653111 1111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...... .+.+ ... ......+.+++.+||+.+|.+|| +++++++.
T Consensus 219 ~~~~~~-----~~~~--------------~~~---~~~~~~~~~li~~~l~~~p~~Rp-s~~~il~~ 262 (280)
T cd06611 219 KILKSE-----PPTL--------------DQP---SKWSSSFNDFLKSCLVKDPDDRP-TAAELLKH 262 (280)
T ss_pred HHhcCC-----CCCc--------------CCc---ccCCHHHHHHHHHHhccChhhCc-CHHHHhcC
Confidence 100000 0000 000 11234578899999999999999 99999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=315.78 Aligned_cols=239 Identities=23% Similarity=0.356 Sum_probs=185.3
Q ss_pred ceeccccEEEEEEEeCCC------------------------CEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceE
Q 001738 711 MIGQGSFGFVYRGILGEG------------------------GLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI 766 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 766 (1019)
.||+|+||.||+|....+ ...||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999985321 24689999876555555678899999999999999999
Q ss_pred EEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCce
Q 001738 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNV 846 (1019)
Q Consensus 767 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 846 (1019)
++++... ...++||||+++|+|..++..... .+++..+..++.||++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLRKEKG-----RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 9999876 668999999999999999875432 278999999999999999999999 999999999999
Q ss_pred EeCCCC-------CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHH-h
Q 001738 847 LLDHDM-------VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMF-I 917 (1019)
Q Consensus 847 ll~~~~-------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell-~ 917 (1019)
+++..+ .+|++|||.+..... .....++..|+|||.+.+ ..++.++|||||||++||++ +
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~-----------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALS-----------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred EEeccCcccCccceeeecCCcccccccc-----------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 997644 489999998864311 112356788999998865 56899999999999999995 6
Q ss_pred CCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh
Q 001738 918 RKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE 997 (1019)
Q Consensus 918 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s 997 (1019)
|+.||....... ........ ...|. .....+.+++.+||+.+|++|| |
T Consensus 218 g~~p~~~~~~~~--~~~~~~~~---------------------~~~~~--------~~~~~~~~li~~cl~~~p~~Rp-s 265 (274)
T cd05076 218 GEVPLKERTPSE--KERFYEKK---------------------HRLPE--------PSCKELATLISQCLTYEPTQRP-S 265 (274)
T ss_pred CCCCccccChHH--HHHHHHhc---------------------cCCCC--------CCChHHHHHHHHHcccChhhCc-C
Confidence 999986532211 11100000 00000 0123478999999999999999 9
Q ss_pred HHHHHHHH
Q 001738 998 MRNVVAKL 1005 (1019)
Q Consensus 998 ~~evl~~L 1005 (1019)
+++|++.|
T Consensus 266 ~~~il~~L 273 (274)
T cd05076 266 FRTILRDL 273 (274)
T ss_pred HHHHHHhh
Confidence 99999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=318.66 Aligned_cols=262 Identities=26% Similarity=0.411 Sum_probs=203.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCE----EEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGL----LVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
.++|+..+.||+|+||.||+|.+..++. .||+|.+..... ....++.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC----
Confidence 3578889999999999999999876665 578888865432 2344688999999999999999999988643
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
..++|+||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 82 --~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 82 --TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred --CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 35789999999999999876532 378999999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~ 936 (1019)
|||+++...... .........++..|+|||.+.+..++.++|||||||++|||++ |+.||.+... ....+..
T Consensus 152 Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~ 224 (303)
T cd05110 152 DFGLARLLEGDE-----KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLL 224 (303)
T ss_pred cccccccccCcc-----cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence 999998653211 1111222345778999999998899999999999999999997 8999865321 1111111
Q ss_pred HHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHhhh
Q 001738 937 MKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREAFL 1013 (1019)
Q Consensus 937 ~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~~~ 1013 (1019)
.... ..|.. ..+...+.+++.+||..+|++|| +++|+++.++++.....
T Consensus 225 ~~~~---------------------~~~~~------~~~~~~~~~li~~c~~~~p~~Rp-~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 225 EKGE---------------------RLPQP------PICTIDVYMVMVKCWMIDADSRP-KFKELAAEFSRMARDPQ 273 (303)
T ss_pred HCCC---------------------CCCCC------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHHHhchh
Confidence 1000 00000 01234578899999999999999 99999999998765543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=312.33 Aligned_cols=257 Identities=23% Similarity=0.362 Sum_probs=190.0
Q ss_pred CceeccccEEEEEEEeC--CCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILG--EGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||.||+|.+. .++..+|+|.++.... .....+.+|+.++++++||||+++++++.+. ...++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEEE
Confidence 46899999999999864 2456799998875432 2335788899999999999999999998765 56799999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++++||+|||.++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999764321 122367788889999999999999999 99999999999999999999999999987532
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccCC-------CCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-------EASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
... .........++..|+|||++.+. .++.++|||||||++|||++ |+.||....... ....
T Consensus 152 ~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~--- 221 (269)
T cd05087 152 KED-----YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTY--- 221 (269)
T ss_pred Ccc-----eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHH---
Confidence 211 11112234578899999987642 35789999999999999996 999996532211 1110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
..........++.+. ....+.+.+++.+|| .+|++|| |++||++.|.
T Consensus 222 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~~c~-~~P~~Rp-t~~~l~~~l~ 268 (269)
T cd05087 222 TVREQQLKLPKPRLK-------------------LPLSDRWYEVMQFCW-LQPEQRP-SAEEVHLLLS 268 (269)
T ss_pred HhhcccCCCCCCccC-------------------CCCChHHHHHHHHHh-cCcccCC-CHHHHHHHhc
Confidence 011111111111110 011345678999999 6899999 9999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=313.80 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=204.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+++.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEEE
Confidence 46888899999999999999999899999999987553 34456788999999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
+|+||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999998653 238999999999999999999999 8 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... .....++..|+|||...+..++.++||||+|+++|+|++|+.||...........+.......
T Consensus 148 ~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (265)
T cd06605 148 SGQLVNSL---------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218 (265)
T ss_pred chhhHHHH---------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence 87542211 111567889999999998899999999999999999999999997543322222222211111
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. .+.+ ........+.+++.+||..+|++|| |+.|+++.
T Consensus 219 ~~-----~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp-t~~~ll~~ 257 (265)
T cd06605 219 EP-----PPRL------------------PSGKFSPDFQDFVNLCLIKDPRERP-SYKELLEH 257 (265)
T ss_pred CC-----CCCC------------------ChhhcCHHHHHHHHHHcCCCchhCc-CHHHHhhC
Confidence 00 0000 0011345678999999999999999 99999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=312.11 Aligned_cols=255 Identities=23% Similarity=0.367 Sum_probs=199.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc------chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR------KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
+|++.+.||+|+||+||+|... +++.+|+|.++... ....+.+.+|++++++++|+||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----- 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----
Confidence 5888999999999999999875 78899999986432 12345688999999999999999999999876
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
+..++||||+++++|.+++..... +++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFGP------LPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 678999999999999999976542 78999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||.+.......... ..........|+..|+|||+..+..++.++||||+||++|||++|+.||...... ......
T Consensus 146 fg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~~ 220 (265)
T cd06631 146 FGCARRLAWVGLHG-THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL----AAMFYI 220 (265)
T ss_pred chhhHhhhhccccc-cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH----HHHHHh
Confidence 99987642211110 0111223356899999999999888999999999999999999999999653211 000000
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... ..+.+ . ......+.+++.+||+.+|.+|| ++.|+++
T Consensus 221 ~~~~~----~~~~~----------------~---~~~~~~~~~~i~~~l~~~p~~Rp-~~~~~l~ 261 (265)
T cd06631 221 GAHRG----LMPRL----------------P---DSFSAAAIDFVTSCLTRDQHERP-SALQLLR 261 (265)
T ss_pred hhccC----CCCCC----------------C---CCCCHHHHHHHHHHhcCCcccCC-CHHHHhc
Confidence 00000 00000 0 01244578999999999999999 9999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=316.02 Aligned_cols=261 Identities=26% Similarity=0.443 Sum_probs=202.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeC-----CCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILG-----EGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 776 (1019)
.++|++.+.||+|+||.||+|.+. .++..||+|++..... ...+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--- 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG--- 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC---
Confidence 457999999999999999999874 2578999999875432 3346788999999999999999999998765
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCC----------------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQ----------------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGD 840 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 840 (1019)
+..++||||+++++|.+++...... .....+++..++.++.|++.||+|||++ +++|||
T Consensus 81 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 81 --KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred --CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 5679999999999999999754321 1123478999999999999999999999 999999
Q ss_pred cCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CC
Q 001738 841 LKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RK 919 (1019)
Q Consensus 841 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~ 919 (1019)
|||+||+++.++.++|+|||.+........ ........++..|+|||...+..++.++|||||||++|||++ |.
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~ 230 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADY-----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGM 230 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcc-----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999875432211 111112234678999999988899999999999999999997 88
Q ss_pred CCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 920 RPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 920 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
.||..... .+.......... .++. ..+..++.+++.+||+.+|.+|| |+.
T Consensus 231 ~p~~~~~~-----~~~~~~~~~~~~------------------~~~~------~~~~~~l~~li~~~l~~~p~~Rp-t~~ 280 (288)
T cd05050 231 QPYYGMAH-----EEVIYYVRDGNV------------------LSCP------DNCPLELYNLMRLCWSKLPSDRP-SFA 280 (288)
T ss_pred CCCCCCCH-----HHHHHHHhcCCC------------------CCCC------CCCCHHHHHHHHHHcccCcccCC-CHH
Confidence 88864321 111111100000 0000 11245688999999999999999 999
Q ss_pred HHHHHHH
Q 001738 1000 NVVAKLC 1006 (1019)
Q Consensus 1000 evl~~L~ 1006 (1019)
|+++.|+
T Consensus 281 el~~~l~ 287 (288)
T cd05050 281 SINRILQ 287 (288)
T ss_pred HHHHHhh
Confidence 9999886
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=311.52 Aligned_cols=240 Identities=21% Similarity=0.363 Sum_probs=186.7
Q ss_pred CceeccccEEEEEEEeCC------------CCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 710 NMIGQGSFGFVYRGILGE------------GGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
+.||+|+||.||+|+... ....||+|++..........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~---- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD---- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 468999999999998642 2346899998766555556788999999999999999999998765
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC----
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV---- 853 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 853 (1019)
...++||||+++++|..++..... .+++..++.++.||++||+|||++ +|+||||||+||+++.++.
T Consensus 77 -~~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 77 -VENIMVEEFVEFGPLDLFMHRKSD-----VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred -CCCEEEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 567899999999999998875432 389999999999999999999999 9999999999999987664
Q ss_pred ---eEEeeeccceeccccCCCCCCCCCcccccccCCcccCccccc-CCCCCCcchHHHHHHHHHHHH-hCCCCCCCCCCC
Q 001738 854 ---AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-GSEASMAGDVYSFGILLLEMF-IRKRPTDSMFND 928 (1019)
Q Consensus 854 ---~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~ell-~g~~Pf~~~~~~ 928 (1019)
++++|||.+..... .....++..|+|||.+. +..++.++|||||||++|||+ +|..||......
T Consensus 148 ~~~~~l~d~g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~ 216 (262)
T cd05077 148 GPFIKLSDPGIPITVLS-----------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA 216 (262)
T ss_pred CceeEeCCCCCCccccC-----------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh
Confidence 89999999864311 12345788999999886 466899999999999999998 588887542111
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
+.. ...... ... ..+ ....+.+++.+||+.||.+|| ++.++++.+
T Consensus 217 -----~~~-~~~~~~-~~~--------------------~~~----~~~~~~~li~~cl~~dp~~Rp-~~~~il~~~ 261 (262)
T cd05077 217 -----EKE-RFYEGQ-CML--------------------VTP----SCKELADLMTHCMNYDPNQRP-FFRAIMRDI 261 (262)
T ss_pred -----HHH-HHHhcC-ccC--------------------CCC----ChHHHHHHHHHHcCCChhhCc-CHHHHHHhc
Confidence 000 000000 000 000 134578999999999999999 999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=312.95 Aligned_cols=265 Identities=23% Similarity=0.281 Sum_probs=203.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|+..+.||.|++|.||+|.+..+++.||+|++..... ....++.+|++++++++||||+++++++..... ...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESS---SSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC---CeEE
Confidence 468888999999999999999988999999999875433 345678999999999999999999999866532 4689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 99999999999998764322 123488999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ......++..|+|||...+..++.++||||+||++|||++|+.||...........+........
T Consensus 153 ~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd06621 153 GELVNS---------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM 223 (287)
T ss_pred cccccc---------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC
Confidence 754211 11134578899999999988999999999999999999999999976422111111111111100
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. .+.+. ............+.+++.+||+.+|.+|| |+.|+++.
T Consensus 224 ~-----~~~~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-t~~eil~~ 266 (287)
T cd06621 224 P-----NPELK-------------DEPGNGIKWSEEFKDFIKQCLEKDPTRRP-TPWDMLEH 266 (287)
T ss_pred C-----chhhc-------------cCCCCCCchHHHHHHHHHHHcCCCcccCC-CHHHHHhC
Confidence 0 00000 00000011245688999999999999999 99999873
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=317.46 Aligned_cols=275 Identities=22% Similarity=0.280 Sum_probs=201.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch-----hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-----AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+|++.+.||+|+||.||+|.+..+++.||+|.++..... ....+..|++++++++|+||+++++++.+. .
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK-----S 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC-----C
Confidence 478889999999999999999888999999999754322 335567899999999999999999999875 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+ +++|.+++.... ..+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 789999999 899999997654 1389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+++...... .......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||..... .........
T Consensus 147 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~--~~~~~~~~~ 217 (298)
T cd07841 147 GLARSFGSPN-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD--IDQLGKIFE 217 (298)
T ss_pred eeeeeccCCC-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc--HHHHHHHHH
Confidence 9998653221 11122356788999998754 4678999999999999999999888764321 111111111
Q ss_pred hCCcchhhccChhh-hhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 939 ALPQRVIEIVDPLL-LLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.............. ...+. .....+..............+.+++.+||+.+|++|| |++|+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~-s~~e~l~~ 282 (298)
T cd07841 218 ALGTPTEENWPGVTSLPDYV-EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI-TARQALEH 282 (298)
T ss_pred HcCCCchhhhhhcccccccc-cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCc-CHHHHhhC
Confidence 11110000000000 00000 0000011111111122356789999999999999999 99999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=315.41 Aligned_cols=265 Identities=23% Similarity=0.301 Sum_probs=205.4
Q ss_pred CHHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecC
Q 001738 695 SYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSI 773 (1019)
Q Consensus 695 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 773 (1019)
+..++....+.|++.+.||+|+||.||+|++..+++.||+|++..... ...++..|+.+++++ +|||++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 345555677899999999999999999999998999999999875433 335688899999998 699999999998643
Q ss_pred CCC-CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC
Q 001738 774 DSH-GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM 852 (1019)
Q Consensus 774 ~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 852 (1019)
... ...+.++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 221 22678999999999999999976542 2378888999999999999999999 999999999999999999
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~ 927 (1019)
.++|+|||++...... ........|++.|+|||.+. +..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~l~dfg~~~~~~~~-------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 159 EVKLVDFGVSAQLDRT-------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred CEEEeeCcchhhhhcc-------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 9999999998754211 11122356899999999875 34678899999999999999999999965321
Q ss_pred CcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 928 DGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. ..... . .....+. .....+...+.+++.+||+.||.+|| ++.|+++
T Consensus 232 ~----~~~~~-~-----~~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rp-~~~ell~ 278 (282)
T cd06636 232 M----RALFL-I-----PRNPPPK------------------LKSKKWSKKFIDFIEGCLVKNYLSRP-STEQLLK 278 (282)
T ss_pred H----hhhhh-H-----hhCCCCC------------------CcccccCHHHHHHHHHHhCCChhhCc-CHHHHhc
Confidence 1 00000 0 0000000 00012345689999999999999999 9999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=310.24 Aligned_cols=251 Identities=23% Similarity=0.316 Sum_probs=203.6
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|+..+.||+|+||.||.++...+++.||+|.+... .....+++.+|++++++++|+||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-----NTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-----CeEE
Confidence 588999999999999999999989999999998644 234456788999999999999999999999876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 99999999999999986532 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......|++.|+|||...+..++.++||||+|+++|||++|..||..... .+........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~ 216 (256)
T cd08221 149 KILGSEY-------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQG 216 (256)
T ss_pred EEccccc-------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcC
Confidence 8653222 112235689999999999888899999999999999999999999864211 1111111110
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
... + ........+.+++.+||+.+|.+|| +++|+++.
T Consensus 217 ~~~------------------~------~~~~~~~~~~~~i~~~l~~~p~~R~-s~~~ll~~ 253 (256)
T cd08221 217 NYT------------------P------VVSVYSSELISLVHSLLQQDPEKRP-TADEVLDQ 253 (256)
T ss_pred CCC------------------C------CccccCHHHHHHHHHHcccCcccCC-CHHHHhhC
Confidence 000 0 0012245578999999999999999 99999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=309.24 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=197.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-----chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-----KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME--- 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC---
Confidence 47899999999999999999999899999999886321 2234678899999999999999999998765422
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++||||+++++|.+++..... +++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYGA------LTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 467899999999999999976542 78889999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||.+........ .........|+..|+|||+..+..++.++|||||||++|||++|+.||..... ... ...
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~-~~~ 220 (265)
T cd06652 150 FGASKRLQTICL----SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAA-IFK 220 (265)
T ss_pred Cccccccccccc----cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHH-HHH
Confidence 999875422110 11112234688999999999888899999999999999999999999964211 111 111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...... .+.. .......+.+++.+|+. +|++|| +++|+++
T Consensus 221 ~~~~~~----~~~~-------------------~~~~~~~~~~~i~~~l~-~p~~Rp-~~~~il~ 260 (265)
T cd06652 221 IATQPT----NPVL-------------------PPHVSDHCRDFLKRIFV-EAKLRP-SADELLR 260 (265)
T ss_pred HhcCCC----CCCC-------------------chhhCHHHHHHHHHHhc-ChhhCC-CHHHHhc
Confidence 100000 0000 01223456788888984 999999 9999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=315.43 Aligned_cols=241 Identities=24% Similarity=0.406 Sum_probs=187.8
Q ss_pred CceeccccEEEEEEEeCCCCE-------EEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGL-------LVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+.||+|+||.||+|.+...+. .||+|.+........+.+.+|+.+++.++|||++++++++... +..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 469999999999998865443 4888988755555557788999999999999999999998875 5678
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC--------e
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV--------A 854 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~ 854 (1019)
+||||+++|+|.++++.... .+++..++.++.||+.|++|||++ +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 99999999999999986542 378999999999999999999999 9999999999999987765 6
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCC-CCCCCCCCCcccH
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRK-RPTDSMFNDGLTI 932 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~-~Pf~~~~~~~~~~ 932 (1019)
+++|||.+..... .....++..|+|||++.+. .++.++|||||||++|||++|. .||...... ..
T Consensus 148 ~l~d~g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~ 214 (258)
T cd05078 148 KLSDPGISITVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KK 214 (258)
T ss_pred EecccccccccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HH
Confidence 9999998864321 1224578899999998764 5799999999999999999985 555431110 00
Q ss_pred HHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 933 HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 933 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
...... . ...|. ....++.+++.+||+.||++|| |++++++.|+
T Consensus 215 ~~~~~~----~-----------------~~~~~--------~~~~~~~~li~~~l~~~p~~Rp-s~~~il~~l~ 258 (258)
T cd05078 215 LQFYED----R-----------------HQLPA--------PKWTELANLINQCMDYEPDFRP-SFRAIIRDLN 258 (258)
T ss_pred HHHHHc----c-----------------ccCCC--------CCcHHHHHHHHHHhccChhhCC-CHHHHHHhcC
Confidence 000000 0 00000 0124578999999999999999 9999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=306.33 Aligned_cols=247 Identities=28% Similarity=0.395 Sum_probs=194.0
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
++||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR-----QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC-----CccEEEEECC
Confidence 46999999999999875 688999999875432 2345688999999999999999999998766 5679999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... .+++..+..++.|++.|+.|+|++ +++||||||+||+++.++.+||+|||++......
T Consensus 75 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 99999999875432 278999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEI 947 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1019)
.. .......++..|+|||+..+..++.++|||||||++||+++ |..||...... ..........
T Consensus 147 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~~~------- 211 (250)
T cd05085 147 IY------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEKGY------- 211 (250)
T ss_pred cc------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCC-------
Confidence 11 11111234678999999988889999999999999999998 99999653211 1111111000
Q ss_pred cChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 948 VDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 948 ~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.... | ..+...+.+++.+|++.+|++|| ++.|+++.|.
T Consensus 212 -~~~~-----------~--------~~~~~~~~~li~~~l~~~p~~Rp-~~~~l~~~l~ 249 (250)
T cd05085 212 -RMSC-----------P--------QKCPDDVYKVMQRCWDYKPENRP-KFSELQKELA 249 (250)
T ss_pred -CCCC-----------C--------CCCCHHHHHHHHHHcccCcccCC-CHHHHHHHhc
Confidence 0000 0 01245678999999999999999 9999998875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=318.54 Aligned_cols=275 Identities=20% Similarity=0.280 Sum_probs=196.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|++..+|+.||+|+++... ......+.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD-----KKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-----CceE
Confidence 5888899999999999999999899999999987432 22235678899999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||++ ++|.+++..... .+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999996 588888765332 289999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+...... .......++..|+|||++.+. .++.++||||+||++|||++|+.|+........... .......
T Consensus 147 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~-~~~~~~~ 218 (284)
T cd07839 147 RAFGIPV-------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK-RIFRLLG 218 (284)
T ss_pred hccCCCC-------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHH-HHHHHhC
Confidence 7542211 111234578899999988764 478999999999999999999998643222111111 1111111
Q ss_pred cchhhccChh-hhhhhhccCCCCCCCCC-CccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QRVIEIVDPL-LLLEVRTNNSKNPCGDG-RGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~-l~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.......... -...+. .....+.... ..........+.+++.+||+.||.+|| |++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~-t~~~il~ 280 (284)
T cd07839 219 TPTEESWPGVSKLPDYK-PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI-SAEEALQ 280 (284)
T ss_pred CCChHHhHHhhhccccc-ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC-CHHHHhc
Confidence 0000000000 000000 0000000000 000012345678999999999999999 9999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=308.87 Aligned_cols=256 Identities=25% Similarity=0.439 Sum_probs=193.5
Q ss_pred CceeccccEEEEEEEeCC---CCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGE---GGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|.+.. .+..||+|.+... .....+.+.+|+.+++.++|||++++++++...+ ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE----GSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC----CCcEEEE
Confidence 468999999999998642 3468999998543 3334567889999999999999999999876432 4568999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+.+++|.+++..... ..++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999976432 267788899999999999999999 9999999999999999999999999999754
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
...... .........++..|+|||...+..++.++|||||||++|||++| .+||.... ......... ...
T Consensus 149 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~---~~~- 219 (262)
T cd05058 149 YDKEYY---SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLL---QGR- 219 (262)
T ss_pred cCCcce---eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHh---cCC-
Confidence 321110 01111233457789999999888899999999999999999995 55564321 111111110 000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
.+.. ...++..+.+++.+||+.+|++|| ++.||++.|+++..
T Consensus 220 ------------------~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp-~~~~il~~l~~~~~ 261 (262)
T cd05058 220 ------------------RLLQ-----PEYCPDPLYEVMLSCWHPKPEMRP-TFSELVSRIEQIFS 261 (262)
T ss_pred ------------------CCCC-----CCcCCHHHHHHHHHHcCCChhhCC-CHHHHHHHHHHHhc
Confidence 0000 011234688999999999999999 99999999988754
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=310.56 Aligned_cols=257 Identities=22% Similarity=0.302 Sum_probs=187.9
Q ss_pred CceeccccEEEEEEEeCC--CCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGE--GGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||+||+|.... ....+|+|.+.... ......+.+|+.+++.++||||+++++.+... ...++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES-----IPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CceEEEEE
Confidence 369999999999996532 34578889876443 23345678999999999999999999998766 66899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++|+|.+++....... ....++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999998754311 12356788899999999999999999 99999999999999999999999999986532
Q ss_pred ccCCCCCCCCCcccccccCCcccCccccc-------CCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGM-------GSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
... .........+++.|+|||+.. ...++.++||||+||++|||++ |..||...... . ....
T Consensus 152 ~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~---~~~~ 221 (269)
T cd05042 152 PED-----YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE--Q---VLKQ 221 (269)
T ss_pred cch-----heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH--H---HHHH
Confidence 211 011112334677899999864 2356889999999999999999 77888643211 1 1111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.......+..++.+ .......+.+++..|| .||++|| |++||++.|.
T Consensus 222 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~-~dp~~Rp-t~~~v~~~l~ 268 (269)
T cd05042 222 VVREQDIKLPKPQL-------------------DLKYSDRWYEVMQFCW-LDPETRP-TAEEVHELLT 268 (269)
T ss_pred HhhccCccCCCCcc-------------------cccCCHHHHHHHHHHh-cCccccc-CHHHHHHHhc
Confidence 11111111111111 0112445677888999 5999999 9999998863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=315.78 Aligned_cols=255 Identities=21% Similarity=0.306 Sum_probs=199.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||+|+||.||+|++..+++.||+|.++.. .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE-----GAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-----CeEE
Confidence 3688999999999999999999889999999998754 333456788999999999999999999988775 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999876421 123899999999999999999999632 8999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS------EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 936 (1019)
..... .......+++.|+|||.+.+. .++.++||||+||++|||++|+.||...... ......
T Consensus 151 ~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~ 219 (286)
T cd06622 151 GNLVA---------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQL 219 (286)
T ss_pred ccccC---------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHHH
Confidence 75421 112234578899999987544 3588999999999999999999999642111 111111
Q ss_pred HHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 937 MKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 937 ~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
....... .+.+ ...+...+.+++.+||+.+|++|| ++++++..
T Consensus 220 ~~~~~~~-----~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rp-~~~~l~~~ 262 (286)
T cd06622 220 SAIVDGD-----PPTL-------------------PSGYSDDAQDFVAKCLNKIPNRRP-TYAQLLEH 262 (286)
T ss_pred HHHhhcC-----CCCC-------------------CcccCHHHHHHHHHHcccCcccCC-CHHHHhcC
Confidence 1000000 0000 011345578999999999999999 99999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=322.78 Aligned_cols=194 Identities=25% Similarity=0.338 Sum_probs=166.1
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
....+|++.+.||+|+||.||+|++..+++.||+|+.... ....|+.++++++||||+++++++... ..
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSG-----AI 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeC-----Ce
Confidence 3446899999999999999999999988999999985422 235689999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+ .++|.+++.... ..+++..++.|+.||+.||+|||++ +||||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 132 TCMVLPHY-SSDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred eEEEEEcc-CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 89999999 468888886543 2389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPT 922 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf 922 (1019)
.++.... ........||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 203 ~a~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 203 AAQFPVV--------APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccc--------CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 9975321 11223456899999999999999999999999999999999865554
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=293.51 Aligned_cols=258 Identities=24% Similarity=0.279 Sum_probs=203.8
Q ss_pred hhCCCCCC-CceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcc
Q 001738 702 ATGEFSTS-NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 702 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.+++|++. ++||-|-.|.|-.+.++.+|+.+|+|++... ....+|++..-.. .|||||.++++|+..-. +..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~-~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQ-GRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhcc-Cce
Confidence 45677765 5899999999999999999999999998633 3446788876555 69999999999976533 347
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC---CCCeEE
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH---DMVAHV 856 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL 856 (1019)
...+|||.|+||.|.+.+++.+.. .+++.++-.|.+||+.|+.|||+. +|.||||||+|+|... +-.+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~----afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ----AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 888999999999999999988754 399999999999999999999999 9999999999999964 457999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 936 (1019)
+|||+|+.... .......+-|++|.|||++...+|+...|+||+||++|-|++|.+||..+....
T Consensus 206 tDfGFAK~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a------- 270 (400)
T KOG0604|consen 206 TDFGFAKETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------- 270 (400)
T ss_pred cccccccccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------
Confidence 99999985421 233344577999999999999999999999999999999999999998753321
Q ss_pred HHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 937 MKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 937 ~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+.|.++...+......| .++.....+...++++..++.+|.+|- |++|++.
T Consensus 271 -----------ispgMk~rI~~gqy~FP----~pEWs~VSe~aKdlIR~LLkt~PteRl-TI~~~m~ 321 (400)
T KOG0604|consen 271 -----------ISPGMKRRIRTGQYEFP----EPEWSCVSEAAKDLIRKLLKTEPTERL-TIEEVMD 321 (400)
T ss_pred -----------CChhHHhHhhccCccCC----ChhHhHHHHHHHHHHHHHhcCCchhhe-eHHHhhc
Confidence 11111111111111111 122234566778999999999999999 9999976
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=320.59 Aligned_cols=266 Identities=25% Similarity=0.376 Sum_probs=204.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCC-------CCEEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGE-------GGLLVAVKVLNLTR-KGAFKSFVAECEALRNI-RHRNLIKIITICSSID 774 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 774 (1019)
.+|++.+.||+|+||.||+|++.. .+..||+|+++... ....+++.+|+++++++ +||||+++++++...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD- 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC-
Confidence 478999999999999999998642 23478999887432 33456789999999999 799999999998765
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCC----------CCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCC
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQ----------HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPS 844 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 844 (1019)
...++||||+++|+|.+++...... .....+++..+..++.|++.||+|||++ +++||||||+
T Consensus 91 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 91 ----GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred ----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 5689999999999999999764321 1123478899999999999999999999 9999999999
Q ss_pred ceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCC
Q 001738 845 NVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTD 923 (1019)
Q Consensus 845 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~ 923 (1019)
||+++.++.+||+|||+++...... .........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNID-----YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred eEEEcCCCcEEECCcccceeccccc-----ccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999997653211 1111122334578999999999899999999999999999998 888886
Q ss_pred CCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 924 SMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... ..+...........+ .| ..+...+.+++.+||+.+|++|| |+.|+++
T Consensus 239 ~~~-----~~~~~~~~~~~~~~~----------------~~--------~~~~~~l~~li~~cl~~~p~~Rp-s~~ell~ 288 (334)
T cd05100 239 GIP-----VEELFKLLKEGHRMD----------------KP--------ANCTHELYMIMRECWHAVPSQRP-TFKQLVE 288 (334)
T ss_pred CCC-----HHHHHHHHHcCCCCC----------------CC--------CCCCHHHHHHHHHHcccChhhCc-CHHHHHH
Confidence 532 111111110000000 00 11244678999999999999999 9999999
Q ss_pred HHHHHHHhh
Q 001738 1004 KLCAAREAF 1012 (1019)
Q Consensus 1004 ~L~~i~~~~ 1012 (1019)
.|+.+....
T Consensus 289 ~l~~~~~~~ 297 (334)
T cd05100 289 DLDRVLTVT 297 (334)
T ss_pred HHHHHhhhc
Confidence 999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=309.23 Aligned_cols=255 Identities=28% Similarity=0.454 Sum_probs=202.3
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|.+. +++.||||.+..... ..+++.+|+.++++++|||++++++++... ...+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE-----EPIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecC-----CceE
Confidence 468999999999999999999986 567899999874432 346789999999999999999999998765 5679
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred EEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 99999999999999977542 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... ........++..|+|||...+..++.++||||+||++||+++ |+.||.+... ....+.......
T Consensus 151 ~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~~~ 222 (261)
T cd05034 151 RLIEDDE------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVLEQVERGYR 222 (261)
T ss_pred eeccchh------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC
Confidence 7653211 111112234678999999998889999999999999999998 9999865321 111111110000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
.+.. .+.+.++.+++.+|++.+|++|| +++++.+.|+.
T Consensus 223 ---------------------~~~~------~~~~~~~~~~i~~~l~~~p~~Rp-~~~~l~~~l~~ 260 (261)
T cd05034 223 ---------------------MPRP------PNCPEELYDLMLQCWDKDPEERP-TFEYLQSFLED 260 (261)
T ss_pred ---------------------CCCC------CCCCHHHHHHHHHHcccCcccCC-CHHHHHHHHhc
Confidence 0000 01134578999999999999999 99999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=310.10 Aligned_cols=265 Identities=27% Similarity=0.433 Sum_probs=202.1
Q ss_pred CCCCCceeccccEEEEEEEeCC---CCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC-cc
Q 001738 706 FSTSNMIGQGSFGFVYRGILGE---GGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG-VD 779 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 779 (1019)
|++.+.||+|+||.||+|.+.. +++.||||+++.. .....+++.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6778899999999999998643 4789999998743 2334567889999999999999999999886653321 12
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++++||+++|+|.+++...........+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 4578999999999999886543222233488999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.++....... ........+++.|++||...+..++.++|||||||++|||++ |++||..... .........
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIK 230 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHc
Confidence 99986532211 111122345678999999988889999999999999999999 8888864321 111111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
.. .. ..+ ..+...+.+++.+||+.+|++|| |++|+++.|+++
T Consensus 231 ---~~-----~~-----------~~~--------~~~~~~~~~l~~~~l~~~p~~Rp-s~~~~~~~l~~~ 272 (273)
T cd05074 231 ---GN-----RL-----------KQP--------PDCLEDVYELMCQCWSPEPKCRP-SFQHLRDQLELI 272 (273)
T ss_pred ---CC-----cC-----------CCC--------CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHhh
Confidence 00 00 000 01245689999999999999999 999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=328.15 Aligned_cols=192 Identities=28% Similarity=0.339 Sum_probs=162.0
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcC---CCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNI---RHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
||+|+||+||+|++..+++.||+|++.... .........|..++.+. +||+|+++++++... ...|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~-----~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD-----SDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC-----CeEEEEE
Confidence 699999999999999899999999986432 22233455677777665 699999999998876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~~------~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKEGR------FSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999999876543 89999999999999999999999 9999999999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 147 LTD-------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred CCC-------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 211 1122345789999999998764 489999999999999999999999965
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=315.03 Aligned_cols=248 Identities=24% Similarity=0.321 Sum_probs=199.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG-----TKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC-----CceEE
Confidence 4667788999999999999998889999999987443 34456788999999999999999999998765 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++.... +++..+..++.|++.|++|||++ +++|+||+|+||+++.++.++++|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 80 IMEYLGGGSALDLLKPGP-------LEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEccCCCcHHHHhhcCC-------CCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 999999999999986532 88999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .... ....
T Consensus 150 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~----~~~~ 216 (277)
T cd06642 150 QLTDTQ-------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFL----IPKN 216 (277)
T ss_pred cccCcc-------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhh----hhcC
Confidence 653211 11122457889999999998889999999999999999999999986432110 0000 0000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..+. ....+...+.+++.+||+.+|.+|| ++.|+++.
T Consensus 217 ----~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~~ 253 (277)
T cd06642 217 ----SPPT-------------------LEGQYSKPFKEFVEACLNKDPRFRP-TAKELLKH 253 (277)
T ss_pred ----CCCC-------------------CCcccCHHHHHHHHHHccCCcccCc-CHHHHHHh
Confidence 0000 0012345678999999999999999 99999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=310.48 Aligned_cols=256 Identities=23% Similarity=0.379 Sum_probs=198.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc----------hhhHHHHHHHHHHhcCCCCCcceEEEEEecCC
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK----------GAFKSFVAECEALRNIRHRNLIKIITICSSID 774 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 774 (1019)
+|.+.+.||+|+||.||+|....+++.||+|.++.... ...+.+.+|+.++++++|||++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 57788999999999999999988899999998863211 1134678899999999999999999998766
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
+..++||||+++++|.++++... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+
T Consensus 81 ----~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 81 ----EYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred ----CceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 67899999999999999997653 288999999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE--ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~ 932 (1019)
+++|||.++...... .........|+..|+|||...... ++.++||||+|+++||+++|..||.....
T Consensus 148 ~l~d~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----- 217 (272)
T cd06629 148 KISDFGISKKSDDIY-----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----- 217 (272)
T ss_pred EEeeccccccccccc-----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----
Confidence 999999987542111 111123346889999999987654 78999999999999999999999864211
Q ss_pred HHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 933 HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 933 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.+.............++.. ...+....+.+++.+||+.+|.+|| |++||++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp-s~~~il~~ 269 (272)
T cd06629 218 IAAMFKLGNKRSAPPIPPD-------------------VSMNLSPVALDFLNACFTINPDNRP-TARELLQH 269 (272)
T ss_pred HHHHHHhhccccCCcCCcc-------------------ccccCCHHHHHHHHHHhcCChhhCC-CHHHHhhC
Confidence 1111111100000000100 0112345688999999999999999 99999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=309.35 Aligned_cols=255 Identities=21% Similarity=0.281 Sum_probs=202.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||.|+||.||+|.+..+++.||+|+++.. .....+++..|++++++++|||++++++++..... ...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSN---QTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCC---CEEE
Confidence 588899999999999999999889999999998643 23345678899999999999999999998765432 5679
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH-----HHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
++|||+++++|.+++..... ....+++..++.++.|++.|++||| +. +++||||||+||+++.++.+||+
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 99999999999999976432 1234899999999999999999999 77 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
|||++....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... .....+...
T Consensus 153 d~g~~~~~~~~~-------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~ 223 (265)
T cd08217 153 DFGLAKILGHDS-------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIK 223 (265)
T ss_pred cccccccccCCc-------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHh
Confidence 999998653221 11223468999999999998889999999999999999999999997532 111111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. ... +.+ .......+.+++.+|++.+|++|| ++++|++.
T Consensus 224 ~----~~~----~~~-------------------~~~~~~~~~~l~~~~l~~~p~~Rp-~~~~il~~ 262 (265)
T cd08217 224 E----GKF----RRI-------------------PYRYSSELNEVIKSMLNVDPDKRP-STEELLQL 262 (265)
T ss_pred c----CCC----CCC-------------------ccccCHHHHHHHHHHccCCcccCC-CHHHHhhC
Confidence 0 000 000 011245678999999999999999 99999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=307.91 Aligned_cols=248 Identities=24% Similarity=0.357 Sum_probs=199.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-----chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-----KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+|+..+.||+|+||+||+|....+++.||+|++.... ....+.+.+|++++++++|+||+++++++... .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE-----D 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC-----C
Confidence 4788899999999999999998889999999986543 23456788999999999999999999998766 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++|+||+++++|.+++..... +++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYGS------FPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 78999999999999999976542 88999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.+....... ......|+..|+|||...... ++.++|+|||||++|+|++|+.||..... .+....
T Consensus 147 ~~~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----~~~~~~ 213 (258)
T cd06632 147 GMAKQVVEFS--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-----VAAVFK 213 (258)
T ss_pred ccceeccccc--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----HHHHHH
Confidence 9987642211 122356889999999987766 89999999999999999999999965321 111110
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.........+. ......+.+++.+||+.+|.+|| +++++++
T Consensus 214 ~~~~~~~~~~~-----------------------~~~~~~~~~li~~~l~~~p~~Rp-~~~~~l~ 254 (258)
T cd06632 214 IGRSKELPPIP-----------------------DHLSDEAKDFILKCLQRDPSLRP-TAAELLE 254 (258)
T ss_pred HHhcccCCCcC-----------------------CCcCHHHHHHHHHHhhcCcccCc-CHHHHhc
Confidence 00000000000 01234568899999999999999 9999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=322.52 Aligned_cols=202 Identities=25% Similarity=0.323 Sum_probs=173.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||+||++++..+++.||+|++... .......+.+|..++..++|++|+++++++.+. ++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~-----~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE-----NY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----CE
Confidence 4789999999999999999999989999999998642 222345578899999999999999999999876 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||++||+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 8999999999999999976432 288999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-----SEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 148 ~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDG------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCC------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 997653211 111123568999999998875 4678999999999999999999999964
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=318.15 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=199.2
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.|.....||+|+||.||++....++..||||.+........+.+.+|+.++++++|||++++++.+... +..++|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG-----DELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-----CeEEEE
Confidence 344457799999999999999888999999998765555567789999999999999999999988765 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
|||+++++|.+++.... +++.++..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 98 ~e~~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 98 MEFLEGGALTDIVTHTR-------MNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EeCCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 99999999999886532 78999999999999999999999 999999999999999999999999999875
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
..... .......|+..|+|||...+..++.++||||+||++|||++|+.||..... ........
T Consensus 168 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~------- 231 (292)
T cd06658 168 VSKEV-------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--LQAMRRIR------- 231 (292)
T ss_pred ccccc-------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH-------
Confidence 42211 112234688999999999888899999999999999999999999864211 11111000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..+.+.... .......+.+++.+||..||.+|| |++|+++.
T Consensus 232 -~~~~~~~~~-----------------~~~~~~~~~~li~~~l~~~P~~Rp-t~~~il~~ 272 (292)
T cd06658 232 -DNLPPRVKD-----------------SHKVSSVLRGFLDLMLVREPSQRA-TAQELLQH 272 (292)
T ss_pred -hcCCCcccc-----------------ccccCHHHHHHHHHHccCChhHCc-CHHHHhhC
Confidence 011111000 001234578899999999999999 99999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=309.64 Aligned_cols=251 Identities=21% Similarity=0.305 Sum_probs=202.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+++...+++.||+|.+... .....+++.+|+.++++++||||+++++++... ++.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN-----GNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-----CeEE
Confidence 588899999999999999999989999999998743 233456789999999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +++|+||+|+||+++.++.++++|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 99999999999999876432 2378999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......|++.|+|||+..+..++.++|||||||++|+|++|+.||... ...+........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~ 216 (256)
T cd08218 149 RVLNSTV-------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIRG 216 (256)
T ss_pred eecCcch-------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhcC
Confidence 7653211 1112345788999999998888999999999999999999999998642 111111111111
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.... ........+.+++.+||+.+|.+|| ++.||++.
T Consensus 217 ~~~~------------------------~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~vl~~ 253 (256)
T cd08218 217 SYPP------------------------VSSHYSYDLRNLVSQLFKRNPRDRP-SVNSILEK 253 (256)
T ss_pred CCCC------------------------CcccCCHHHHHHHHHHhhCChhhCc-CHHHHhhC
Confidence 1000 0012245678999999999999999 99999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=316.47 Aligned_cols=252 Identities=23% Similarity=0.278 Sum_probs=203.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.++++++|||++++++++... +..|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----DELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC-----CcEE
Confidence 36899999999999999999998888999999998765555557788999999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||+++++|.+++.... +++.++..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEecCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 9999999999999997643 78999999999999999999999 9999999999999999999999999988
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......|++.|+|||...+..++.++|||||||++|++++|+.||......... .. ...
T Consensus 163 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~-~~~---- 229 (293)
T cd06647 163 AQITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YL-IAT---- 229 (293)
T ss_pred ecccccc-------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-ee-hhc----
Confidence 7543211 1122346889999999998888999999999999999999999999653211100 00 000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
. ..|... ........+.+++.+||+.+|.+|| ++++++.+
T Consensus 230 ------~------------~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp-~~~~il~h 269 (293)
T cd06647 230 ------N------------GTPELQ---NPEKLSAIFRDFLNRCLEMDVEKRG-SAKELLQH 269 (293)
T ss_pred ------C------------CCCCCC---CccccCHHHHHHHHHHccCChhhCc-CHHHHhcC
Confidence 0 000000 0011234578999999999999999 99999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=316.53 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=200.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++||||+++++.+... ++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK-----RH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC-----CE
Confidence 36889999999999999999999899999999987543 23345778999999999999999999998765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||++|++|.++++.... +++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~------~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIGA------LPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 8999999999999999976542 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCC--------CCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 001738 861 LAKFLYTCQVDD--------VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932 (1019)
Q Consensus 861 ~a~~~~~~~~~~--------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~ 932 (1019)
.++......... ...........|+..|+|||.+.+..++.++|||||||++|||++|..||.+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~----- 221 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP----- 221 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 986421110000 0000111234578899999999888899999999999999999999999964211
Q ss_pred HHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 933 HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 933 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.+......... ... |... ......+.+++.+||+.||++|| ++.++.+.++
T Consensus 222 ~~~~~~~~~~~---~~~--------------~~~~-----~~~~~~~~~li~~~l~~~P~~R~-~~~~~~~ll~ 272 (305)
T cd05609 222 EELFGQVISDD---IEW--------------PEGD-----EALPADAQDLISRLLRQNPLERL-GTGGAFEVKQ 272 (305)
T ss_pred HHHHHHHHhcc---cCC--------------CCcc-----ccCCHHHHHHHHHHhccChhhcc-CccCHHHHHh
Confidence 11111100000 000 0000 01244578999999999999999 8655555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=317.92 Aligned_cols=273 Identities=25% Similarity=0.321 Sum_probs=200.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK-----KRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-----CeE
Confidence 46889999999999999999998889999999986432 22346688999999999999999999998765 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++++++.++...... +++..++.++.|++.|++|||+. +++||||+|+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPNG------LDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccCC------CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 999999999999887765432 89999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH--H
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM--K 938 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~ 938 (1019)
+....... .......++..|+|||+..+. .++.++|||||||++|||++|++||..... ......... .
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~ 218 (286)
T cd07846 147 ARTLAAPG-------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLG 218 (286)
T ss_pred eeeccCCc-------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhC
Confidence 87653211 112234678999999988753 478899999999999999999999864321 111111100 0
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCcc----HHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGG----IEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..........+..... .....|....... .......+.+++.+||+.+|++|| +++++++
T Consensus 219 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-~~~~il~ 282 (286)
T cd07846 219 NLIPRHQEIFQKNPLF----AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRP-SSSQLLH 282 (286)
T ss_pred CCchhhHHHhccchHh----hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccch-hHHHHhc
Confidence 1111111111110000 0000111000000 012345689999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=309.34 Aligned_cols=256 Identities=23% Similarity=0.339 Sum_probs=200.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc------chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR------KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
+|+..+.||+|+||.||+|....+++.||+|+++... ....+.+.+|++++++++|+|++++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED----- 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC-----
Confidence 4788899999999999999998899999999987433 12346788999999999999999999998766
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-CeEEe
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-VAHVG 857 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~ 857 (1019)
+..++||||+++++|.+++..... +++..+..++.|++.||+|||++ +++|+||+|+||+++.++ .+||+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYGA------FKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 678999999999999999976542 88999999999999999999999 999999999999998776 59999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
|||.+........ ..........|+..|+|||.+.+..++.++||||+|+++|+|++|..||...... .......
T Consensus 147 dfg~~~~~~~~~~---~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~ 221 (268)
T cd06630 147 DFGAAARLAAKGT---GAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIF 221 (268)
T ss_pred ccccccccccccc---cCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHH
Confidence 9999976533211 0111122346889999999998888999999999999999999999999643211 1111111
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
....... .+ .........+.+++.+|++.+|.+|| ++.|+++
T Consensus 222 ~~~~~~~----~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~R~-~~~~ll~ 263 (268)
T cd06630 222 KIASATT----AP-------------------SIPEHLSPGLRDVTLRCLELQPEDRP-PSRELLK 263 (268)
T ss_pred HHhccCC----CC-------------------CCchhhCHHHHHHHHHHcCCCcccCc-CHHHHhc
Confidence 1000000 00 00012245578899999999999999 9999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=305.58 Aligned_cols=248 Identities=28% Similarity=0.408 Sum_probs=195.6
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
++||+|+||.||+|.+.. ++.||+|.+...... ..+.+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK-----QPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----CCeEEEEEcC
Confidence 479999999999999976 999999998754433 456789999999999999999999998776 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... .+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 75 ~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 99999999976432 378999999999999999999999 9999999999999999999999999999754211
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcchhhc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRVIEI 947 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1019)
. .........++..|+|||.+.+..++.++|||||||++|||++ |..||...... ...........
T Consensus 147 ~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~~------ 213 (251)
T cd05041 147 I-----YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGYR------ 213 (251)
T ss_pred c-----ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCCC------
Confidence 1 0111111233567999999988899999999999999999999 88888653211 11111100000
Q ss_pred cChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 948 VDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 948 ~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.+.. .....++.+++.+|++.+|.+|| |++|+++.|+
T Consensus 214 ---------------~~~~------~~~~~~~~~li~~~l~~~p~~Rp-~~~ell~~l~ 250 (251)
T cd05041 214 ---------------MPAP------QLCPEEIYRLMLQCWAYDPENRP-SFSEIYNELQ 250 (251)
T ss_pred ---------------CCCC------ccCCHHHHHHHHHHhccChhhCc-CHHHHHHHhh
Confidence 0000 11245689999999999999999 9999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=307.50 Aligned_cols=255 Identities=23% Similarity=0.349 Sum_probs=186.9
Q ss_pred CceeccccEEEEEEEeCCC--CEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGEG--GLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.||+|+||+||+|+...+ ...+++|.++... ....+.+.+|+.+++.++||||+++++.+... ...++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA-----IPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC-----CccEEEEe
Confidence 3699999999999976422 2456677766443 33456889999999999999999999998765 56899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
|+++|+|.++++..... ....++..++.++.||+.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999865322 22367778889999999999999999 99999999999999999999999999986421
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMG-------SEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
... .........++..|+|||+... ..++.++|||||||++|||++ |..||..... .+....
T Consensus 151 ~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~ 220 (268)
T cd05086 151 KED-----YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNH 220 (268)
T ss_pred cch-----hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH
Confidence 111 0111223567899999998743 245789999999999999997 5667754211 111111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
...+......++.+... ....+.+++..|| .+|++|| +++||++.|
T Consensus 221 ~~~~~~~~~~~~~~~~~-------------------~~~~~~~l~~~c~-~~P~~Rp-~~~~i~~~l 266 (268)
T cd05086 221 VIKDQQVKLFKPQLELP-------------------YSERWYEVLQFCW-LSPEKRA-TAEEVHRLL 266 (268)
T ss_pred HHhhcccccCCCccCCC-------------------CcHHHHHHHHHHh-hCcccCC-CHHHHHHHh
Confidence 11111112222222111 1345678889999 6799999 999998876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=321.32 Aligned_cols=202 Identities=25% Similarity=0.321 Sum_probs=172.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.++||+|+||+||++++..+++.||+|++... .......+.+|+.++..++|++|+++++++.+. +.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE-----NN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----CE
Confidence 4789999999999999999999989999999998642 222334578899999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 8999999999999999976432 289999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
++....... ........||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 148 SCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred hheecccCC------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 987542211 11122357899999999876 34688999999999999999999999964
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=317.11 Aligned_cols=203 Identities=22% Similarity=0.313 Sum_probs=163.1
Q ss_pred CceeccccEEEEEEEeCC--CCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEee
Q 001738 710 NMIGQGSFGFVYRGILGE--GGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEY 787 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~ 787 (1019)
.+||+|+||+||+|+... ++..||+|.++... ....+.+|++++++++||||+++++++..... ...++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSD---RKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCC---CeEEEEEee
Confidence 579999999999999753 56789999986443 22467889999999999999999999865433 567999999
Q ss_pred ccCCCHHHHHhccCC---CCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe----CCCCCeEEeeec
Q 001738 788 MQNGSLEEWLHHSND---QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFG 860 (1019)
Q Consensus 788 ~~~gsL~~~l~~~~~---~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Dfg 860 (1019)
++ ++|.+++..... ......+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 86 588888754321 11223488999999999999999999999 99999999999999 566799999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
+++....... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 158 ~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcc----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9986533211 1112234578999999999876 45899999999999999999999999754
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=311.42 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=196.0
Q ss_pred CceeccccEEEEEEEeCCCC------EEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 710 NMIGQGSFGFVYRGILGEGG------LLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+.||+|+||.||+|++.... +.||+|.+.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN-----EPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-----CCeE
Confidence 36899999999999986433 789999886443 23456788999999999999999999998765 5689
Q ss_pred EEEeeccCCCHHHHHhccCCCC-CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-----CeEE
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQH-DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-----VAHV 856 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kL 856 (1019)
+||||+++++|.+++....... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .+++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997643221 223478999999999999999999999 999999999999999877 8999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~ 935 (1019)
+|||++........ ........++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......
T Consensus 153 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~ 225 (269)
T cd05044 153 GDFGLARDIYKSDY-----YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQH 225 (269)
T ss_pred CCcccccccccccc-----cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHH
Confidence 99999976532221 111122345788999999998899999999999999999998 9999864211 111111
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.. ... .+ ......+..+.+++.+||+.+|.+|| ++++|++.|+
T Consensus 226 ~~---~~~-------------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~i~~~l~ 268 (269)
T cd05044 226 VT---AGG-------------------RL-----QKPENCPDKIYQLMTNCWAQDPSERP-TFDRIQEILQ 268 (269)
T ss_pred Hh---cCC-------------------cc-----CCcccchHHHHHHHHHHcCCCcccCC-CHHHHHHHHh
Confidence 00 000 00 00011245678999999999999999 9999999886
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=307.78 Aligned_cols=246 Identities=29% Similarity=0.442 Sum_probs=195.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
++|++.+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++|||++++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 4689999999999999999975 67889999986432 33678899999999999999999998864 33689
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... ..+++..+..++.|++.|++|||+. |++||||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 9999999999999976542 2378999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
..... ......+..|+|||.+.+..++.++|||||||++|||++ |+.||...... ...+......
T Consensus 149 ~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~-- 214 (254)
T cd05083 149 VGSMG----------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECVEKGY-- 214 (254)
T ss_pred ecccc----------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhCCC--
Confidence 53211 111234578999999988899999999999999999997 99998653211 1111110000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.+.. ...++..+.+++.+||+.+|++|| +++++++.|+
T Consensus 215 --------------------~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp-~~~~l~~~l~ 252 (254)
T cd05083 215 --------------------RMEP-----PEGCPADVYVLMTSCWETEPKKRP-SFHKLREKLE 252 (254)
T ss_pred --------------------CCCC-----CCcCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHc
Confidence 0000 012245678999999999999999 9999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=321.88 Aligned_cols=280 Identities=21% Similarity=0.243 Sum_probs=205.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.+.||+|+||.||+|++..+|+.||+|++... .......+.+|+.++++++||||+++++++...........
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999999989999999998643 23344667889999999999999999998776544334568
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++|+||++ +++.+++.... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~-------l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQH-------LSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 99999996 58888876543 89999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+........ .........|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||..... ...........
T Consensus 153 ~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~ 226 (336)
T cd07849 153 ARIADPEHD----HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVL 226 (336)
T ss_pred eeecccccc----ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHc
Confidence 976532211 1112234568999999998654 4689999999999999999999999965321 11111111111
Q ss_pred Ccc----hhhccChhhhhhhhccCCCCCCCCCCcc---HHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 941 PQR----VIEIVDPLLLLEVRTNNSKNPCGDGRGG---IEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 941 ~~~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~---~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
... ...+.+........ ..|....... ......++.+++.+||+.||++|| |++|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp-t~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLRARNYIK----SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRI-TVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchhhhhHHh----hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCc-CHHHHhcC
Confidence 111 11111111111000 0000000000 011245688999999999999999 99999875
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=306.56 Aligned_cols=251 Identities=28% Similarity=0.452 Sum_probs=198.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.+|++.+.||+|+||.||+|.+. .+..+|+|+++.... ....+.+|++++++++||+++++++++... ...++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTER-----SPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccC-----CceEE
Confidence 47888999999999999999886 467899998864322 235788999999999999999999998765 56899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 9999999999999876432 378999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ........++..|+|||...+..++.++||||+|+++|||++ |..||..... ....+....
T Consensus 149 ~~~~~~------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~---- 216 (256)
T cd05112 149 FVLDDQ------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SEVVETINA---- 216 (256)
T ss_pred ecccCc------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHhC----
Confidence 542211 111122335678999999988889999999999999999998 9999864221 111111100
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
.. .... |. ....++.+++.+||+.+|++|| |++|+++.|
T Consensus 217 ~~-~~~~--------------~~--------~~~~~~~~l~~~~l~~~p~~Rp-~~~~~l~~l 255 (256)
T cd05112 217 GF-RLYK--------------PR--------LASQSVYELMQHCWKERPEDRP-SFSLLLHQL 255 (256)
T ss_pred CC-CCCC--------------CC--------CCCHHHHHHHHHHcccChhhCC-CHHHHHHhh
Confidence 00 0000 00 0135689999999999999999 999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=348.55 Aligned_cols=255 Identities=28% Similarity=0.385 Sum_probs=206.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
+-+|....+||.|.||.||-|...++|...|+|.++.. .....+.+.+|..++..++|||+|+++|+-... +.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR-----ek 1308 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR-----EK 1308 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH-----HH
Confidence 34677788999999999999999999999999998643 344566788999999999999999999987665 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.+|.||||++|+|.+.+...+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|||
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeeccc
Confidence 8999999999999999987764 67777778899999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE---ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
.|..+..... ..+......+||+.|||||++.+.. -..++||||+|||+.||+||+.||...+.+-.-+...++
T Consensus 1380 sa~ki~~~~~---~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1380 SAVKIKNNAQ---TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA 1456 (1509)
T ss_pred ceeEecCchh---cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc
Confidence 9988754321 1223334678999999999998753 466899999999999999999999876554433333333
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...|+-... ...+=.+++..|++.||++|. ++.|+++
T Consensus 1457 gh~Pq~P~~----------------------------ls~~g~dFle~Cl~~dP~~Rw-~~~qlle 1493 (1509)
T KOG4645|consen 1457 GHKPQIPER----------------------------LSSEGRDFLEHCLEQDPKMRW-TASQLLE 1493 (1509)
T ss_pred cCCCCCchh----------------------------hhHhHHHHHHHHHhcCchhhh-HHHHHHH
Confidence 332221111 122336888999999999999 9988765
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=312.24 Aligned_cols=269 Identities=19% Similarity=0.236 Sum_probs=191.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCC---CEEEEEEEeecccchhh-----------HHHHHHHHHHhcCCCCCcceEEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEG---GLLVAVKVLNLTRKGAF-----------KSFVAECEALRNIRHRNLIKIIT 768 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 768 (1019)
.++|.+.+.||+|+||+||+|.+..+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36899999999999999999998766 66778887543322110 11223344556678999999999
Q ss_pred EEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 769 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
++...... ..+.++++|++ ..++.+.+..... .++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFKRCR-MYYRFILLEKL-VENTKEIFKRIKC------KNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEecCC-ceEEEEEEehh-ccCHHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 76654322 13567888887 4477777665432 57888899999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND 928 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~ 928 (1019)
+.++.++|+|||+|+....................||+.|+|||+..+..++.++|||||||++|||++|+.||......
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 99999999999999866322111110111222346999999999999999999999999999999999999999764322
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
........... ...+..+.. ....+...+.+++..|++.+|++|| +++++.+.+
T Consensus 240 ~~~~~~~~~~~----~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~rp-~~~~l~~~~ 293 (294)
T PHA02882 240 GNLIHAAKCDF----IKRLHEGKI------------------KIKNANKFIYDFIECVTKLSYEEKP-DYDALIKIF 293 (294)
T ss_pred hHHHHHhHHHH----HHHhhhhhh------------------ccCCCCHHHHHHHHHHHhCCCCCCC-CHHHHHHhh
Confidence 21111111000 000000000 0011245688999999999999999 999999876
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=316.65 Aligned_cols=249 Identities=22% Similarity=0.300 Sum_probs=198.4
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
|+....||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++|||++++++++... +..++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG-----EELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC-----CeEEEEE
Confidence 44456799999999999999888999999999765555556788999999999999999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++.... +++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 98 e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 98 EFLQGGALTDIVSQTR-------LNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred ecCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 9999999999886533 89999999999999999999999 9999999999999999999999999998754
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .......... +
T Consensus 168 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~-~---- 233 (297)
T cd06659 168 SKDV-------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDS-P---- 233 (297)
T ss_pred cccc-------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcc-C----
Confidence 2211 112235689999999999988899999999999999999999999864211 1111100000 0
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.+.. .........+.+++.+||+.+|.+|| +++|+++.
T Consensus 234 ---~~~~-----------------~~~~~~~~~l~~~i~~~l~~~P~~Rp-s~~~ll~~ 271 (297)
T cd06659 234 ---PPKL-----------------KNAHKISPVLRDFLERMLTREPQERA-TAQELLDH 271 (297)
T ss_pred ---CCCc-----------------cccCCCCHHHHHHHHHHhcCCcccCc-CHHHHhhC
Confidence 0000 00001234578899999999999999 99999884
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=322.44 Aligned_cols=208 Identities=30% Similarity=0.429 Sum_probs=177.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCC-CCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSID-SHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~ 781 (1019)
+.|...+.||+|+||.||+|+++.+|+.||||.++... ...++...+|++++++++|||||+++++-++.. .--.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 45667789999999999999999999999999997543 334577889999999999999999999865543 0112567
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC--CCC--CeEEe
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD--HDM--VAHVG 857 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kL~ 857 (1019)
.+|||||.||||+..+.+... ...+++.+++.++.+++.||.|||++ |||||||||.||++- ++| ..||+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN---~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPEN---AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred eEEEeecCCCcHHHHhcCccc---ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeee
Confidence 899999999999999987653 34599999999999999999999999 999999999999983 334 58999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
|||.|+.+.+ .......+||..|.+||.... +.|+..+|.|||||++|+.+||..||...
T Consensus 167 DfG~Arel~d--------~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 167 DFGAARELDD--------NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred cccccccCCC--------CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 9999997632 235567899999999999984 78999999999999999999999999764
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=311.86 Aligned_cols=275 Identities=21% Similarity=0.253 Sum_probs=202.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|+.++++++|||++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG-----SGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-----CeeE
Confidence 5888999999999999999998889999999987543 33456789999999999999999999998875 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 999999987643 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... ........|+..|+|||++.+. .++.++||||+||++|||++|.+||..... ............
T Consensus 147 ~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~ 218 (286)
T cd07832 147 RLFSEEE------PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLG 218 (286)
T ss_pred ccccCCC------CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcC
Confidence 7653221 0112234689999999998654 468999999999999999999888864321 111111111111
Q ss_pred cc----hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QR----VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. ..+..+..-.... .....+.........+....+.+++.+|++.+|++|| |++++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-~~~~~l~h 282 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKI--TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRL-SAAEALRH 282 (286)
T ss_pred CCChHHHhhccCcchhhcc--cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCC-CHHHHhhC
Confidence 10 0000000000000 0000000000000012246789999999999999999 99999763
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=311.46 Aligned_cols=262 Identities=24% Similarity=0.294 Sum_probs=204.0
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCC-CCc
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDS-HGV 778 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 778 (1019)
..+++|++.+.||+|+||.||+|.+..+++.||+|++..... ..+.+.+|+.+++++ .|+||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 356899999999999999999999988899999999875543 346789999999999 69999999999877543 223
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 6789999999999999998754311 12389999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-----SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~ 933 (1019)
||++....... .......|+..|+|||++.. ..++.++||||+||++|+|++|+.||......
T Consensus 157 ~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----- 224 (275)
T cd06608 157 FGVSAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM----- 224 (275)
T ss_pred Cccceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-----
Confidence 99987643211 12223568899999998753 34688999999999999999999999642111
Q ss_pred HHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 934 EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 934 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.......... .+.+ .........+.+++.+||+.||++|| |++|+++
T Consensus 225 ~~~~~~~~~~-----~~~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rp-t~~~ll~ 271 (275)
T cd06608 225 RALFKIPRNP-----PPTL-----------------KSPENWSKKFNDFISECLIKNYEQRP-FMEELLE 271 (275)
T ss_pred HHHHHhhccC-----CCCC-----------------CchhhcCHHHHHHHHHHhhcChhhCc-CHHHHhc
Confidence 0011100000 0000 00112345688999999999999999 9999976
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=305.27 Aligned_cols=254 Identities=24% Similarity=0.421 Sum_probs=200.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.++|++.+.||+|+||.||+|.+. .+..+|+|.++... ...+.+.+|++++++++|+||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 468999999999999999999875 56679999887432 334678899999999999999999998765 3468
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 99999999999999976432 2378899999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
....... ........++..|+|||++.+..++.++|||||||++|++++ |+.||..... ....+.......
T Consensus 150 ~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~ 221 (260)
T cd05073 150 RVIEDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYR 221 (260)
T ss_pred eeccCCC------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCC
Confidence 7653211 111122345678999999988889999999999999999998 8999865321 111111100000
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
. + ........+.+++.+|++.+|++|| ++.++.+.|+.
T Consensus 222 ---~------------------~------~~~~~~~~~~~~i~~~l~~~p~~Rp-~~~~l~~~L~~ 259 (260)
T cd05073 222 ---M------------------P------RPENCPEELYNIMMRCWKNRPEERP-TFEYIQSVLDD 259 (260)
T ss_pred ---C------------------C------CcccCCHHHHHHHHHHcccCcccCc-CHHHHHHHHhc
Confidence 0 0 0011244678999999999999999 99999998874
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=304.73 Aligned_cols=252 Identities=31% Similarity=0.523 Sum_probs=200.4
Q ss_pred CCCCCceeccccEEEEEEEeCCCC----EEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGG----LLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
+++.+.||+|+||.||+|++...+ ..||+|+++..... ..+.+..|+++++.++|+||+++++++.+. +.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----EP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----Ce
Confidence 457789999999999999998665 89999999755433 567889999999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++++|.+++...... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 89999999999999999865421 179999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.+......... ......+++.|+|||...+..++.++||||+|+++|||++ |.+||... ......+....
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--~~~~~~~~~~~- 219 (258)
T smart00219 149 LSRDLYDDDYY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--SNEEVLEYLKK- 219 (258)
T ss_pred Cceeccccccc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhc-
Confidence 99866433211 1112236789999999988889999999999999999998 78888652 11111111110
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
... +.. . .....++.+++.+|++.+|++|| |++|+++.|
T Consensus 220 --~~~-------------------~~~--~---~~~~~~~~~~i~~~l~~~p~~Rp-t~~~ll~~l 258 (258)
T smart00219 220 --GYR-------------------LPK--P---ENCPPEIYKLMLQCWAEDPEDRP-TFSELVEIL 258 (258)
T ss_pred --CCC-------------------CCC--C---CcCCHHHHHHHHHHCcCChhhCc-CHHHHHhhC
Confidence 000 000 0 11345688999999999999999 999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=310.12 Aligned_cols=260 Identities=23% Similarity=0.402 Sum_probs=202.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCC-----CCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGE-----GGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
++|++.+.||+|+||+||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA---- 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC----
Confidence 478899999999999999999753 3467999998654433 457789999999999999999999998765
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCC---ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHD---VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
...++||||+++++|.+++........ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 81 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 81 -EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred -CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 567999999999999999986552111 12489999999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIH 933 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~ 933 (1019)
+++|||++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ...
T Consensus 157 ~l~~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~ 228 (275)
T cd05046 157 KVSLLSLSKDVYNSE------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVL 228 (275)
T ss_pred EEcccccccccCccc------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHH
Confidence 999999987542211 111223356778999999888889999999999999999998 78888643211 111
Q ss_pred HHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 934 EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 934 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
.... ..... . +. ...+...+.+++.+||+.+|.+|| |+.|+++.|.
T Consensus 229 ~~~~---~~~~~-~----------------~~------~~~~~~~l~~~i~~~l~~~p~~Rp-~~~~~l~~l~ 274 (275)
T cd05046 229 NRLQ---AGKLE-L----------------PV------PEGCPSRLYKLMTRCWAVNPKDRP-SFSELVSALG 274 (275)
T ss_pred HHHH---cCCcC-C----------------CC------CCCCCHHHHHHHHHHcCCCcccCC-CHHHHHHHhc
Confidence 1100 00000 0 00 011245688999999999999999 9999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=303.87 Aligned_cols=249 Identities=25% Similarity=0.395 Sum_probs=199.6
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|+..+.||+|+||.||+|....+++.+|+|.+... .....+.+.+|++++++++|||++++++.+... +..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED-----KALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-----CEEE
Confidence 588899999999999999999889999999998754 233456788999999999999999999988755 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC-CCeEEeeecc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGL 861 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Dfg~ 861 (1019)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +++||||||+||+++.+ +.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 99999999999999976432 2389999999999999999999999 99999999999999865 4689999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+...... .......|+..|+|||...+..++.++||||+|+++|+|++|+.||..... .........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~ 215 (256)
T cd08220 149 SKILSSK--------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIMS 215 (256)
T ss_pred ceecCCC--------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHHh
Confidence 9865321 112234678999999999988899999999999999999999999865321 111111100
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...... . ......+.+++.+||+.+|.+|| |++|+++
T Consensus 216 ~~~~~~------------------~------~~~~~~l~~li~~~l~~~p~~Rp-t~~~ll~ 252 (256)
T cd08220 216 GTFAPI------------------S------DRYSPDLRQLILSMLNLDPSKRP-QLSQIMA 252 (256)
T ss_pred cCCCCC------------------C------CCcCHHHHHHHHHHccCChhhCC-CHHHHhh
Confidence 000000 0 01244578999999999999999 9999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=315.41 Aligned_cols=259 Identities=27% Similarity=0.312 Sum_probs=201.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc---hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE-----TY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC-----CE
Confidence 368889999999999999999988899999999975432 2456788999999999999999999998765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 8999999999999999875432 2389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCC----------------------CCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDV----------------------ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918 (1019)
Q Consensus 861 ~a~~~~~~~~~~~----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g 918 (1019)
++........... ..........|+..|+|||+..+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 9875432211000 000111234689999999999988899999999999999999999
Q ss_pred CCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-
Q 001738 919 KRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE- 997 (1019)
Q Consensus 919 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s- 997 (1019)
+.||...... +.... +.+... ..| ........+.+++.+||+.||++|| |
T Consensus 229 ~~pf~~~~~~-----~~~~~--------~~~~~~---------~~~------~~~~~~~~~~~li~~~l~~~p~~R~-s~ 279 (316)
T cd05574 229 TTPFKGSNRD-----ETFSN--------ILKKEV---------TFP------GSPPVSSSARDLIRKLLVKDPSKRL-GS 279 (316)
T ss_pred CCCCCCCchH-----HHHHH--------HhcCCc---------cCC------CccccCHHHHHHHHHHccCCHhHCC-Cc
Confidence 9999753221 11111 000000 000 0001345689999999999999999 8
Q ss_pred ---HHHHHH
Q 001738 998 ---MRNVVA 1003 (1019)
Q Consensus 998 ---~~evl~ 1003 (1019)
++|++.
T Consensus 280 ~~~~~~ll~ 288 (316)
T cd05574 280 KRGAAEIKQ 288 (316)
T ss_pred hhhHHHHHc
Confidence 666655
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=311.51 Aligned_cols=248 Identities=27% Similarity=0.299 Sum_probs=199.2
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD-----SN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC-----Ce
Confidence 47899999999999999999999899999999987432 23456788999999999999999999998776 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++++|.+++..... +++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~~------l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSGR------FPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 8999999999999999977543 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++...... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+......
T Consensus 147 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 211 (290)
T cd05580 147 FAKRVKGR----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKIL 211 (290)
T ss_pred CccccCCC----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHh
Confidence 98764221 223468899999999988888999999999999999999999996532 111111110
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
... ..+ | ......+.+++.+||+.||.+||+++.+.++.+
T Consensus 212 ~~~------~~~-----------~--------~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l 251 (290)
T cd05580 212 EGK------VRF-----------P--------SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDI 251 (290)
T ss_pred cCC------ccC-----------C--------ccCCHHHHHHHHHHccCCHHHccCcccCCHHHH
Confidence 000 000 0 001345789999999999999995544444433
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=304.65 Aligned_cols=254 Identities=27% Similarity=0.366 Sum_probs=205.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|+..+.+++|+|++++++++... ...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-----GEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-----CeEE
Confidence 368899999999999999999998899999999876543 4457889999999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
+||||+++++|.+++.... .+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999998653 28999999999999999999999 8 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... .......++..|+|||...+..++.++||||||+++|||++|+.||..... ....+.......
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~ 217 (264)
T cd06623 147 SKVLENTL-------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICD 217 (264)
T ss_pred ceecccCC-------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhc
Confidence 98653221 111234678999999999988899999999999999999999999976432 111111111110
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. .+... . ......+.+++.+||+.+|++|| ++.|+++.
T Consensus 218 ~~-----~~~~~--------------~----~~~~~~l~~li~~~l~~~p~~R~-~~~~ll~~ 256 (264)
T cd06623 218 GP-----PPSLP--------------A----EEFSPEFRDFISACLQKDPKKRP-SAAELLQH 256 (264)
T ss_pred CC-----CCCCC--------------c----ccCCHHHHHHHHHHccCChhhCC-CHHHHHhC
Confidence 00 00000 0 00245689999999999999999 99999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=292.88 Aligned_cols=201 Identities=28% Similarity=0.371 Sum_probs=180.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
-++|+..++||+|.||+|.+++.+.+++.||+|++++. .++.......|-++++..+||.+..+-..|... +
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~-----d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ-----D 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC-----c
Confidence 46788999999999999999999999999999999854 455566778899999999999999887777776 7
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..|+||||..||.|.-++...+. +++...+.+..+|+.||.|||++ +||+||+|.+|.|+|.||++||+||
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~------FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERV------FSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhc------ccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 89999999999999988877554 89999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
|+++. +.........++|||.|.|||++....|+.+.|.|.+||++|||++|+.||..
T Consensus 313 GLCKE-------~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 313 GLCKE-------EIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred ccchh-------cccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 99974 22234456678999999999999999999999999999999999999999975
|
|
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=303.83 Aligned_cols=251 Identities=29% Similarity=0.416 Sum_probs=197.3
Q ss_pred CceeccccEEEEEEEeCC-CC--EEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGE-GG--LLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|.+.. .+ ..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999864 23 3699999976655 566789999999999999999999998865 3578999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999987542 2389999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
..... .........++..|+|||+..+..++.++|||||||++|||++ |+.||...... ...+..... ...
T Consensus 148 ~~~~~----~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~-~~~- 219 (257)
T cd05040 148 PQNED----HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKE-GER- 219 (257)
T ss_pred ccccc----ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhc-CCc-
Confidence 33211 1111123456789999999988889999999999999999998 99998642111 111111100 000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
...| ...+..+.+++.+|++.+|++|| +++|+++.|.
T Consensus 220 ----------------~~~~--------~~~~~~~~~li~~~l~~~p~~Rp-s~~~~~~~l~ 256 (257)
T cd05040 220 ----------------LERP--------EACPQDIYNVMLQCWAHNPADRP-TFAALREFLP 256 (257)
T ss_pred ----------------CCCC--------ccCCHHHHHHHHHHCCCCcccCC-CHHHHHHHhc
Confidence 0000 11245688999999999999999 9999998875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=288.56 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=202.9
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
+.||+|+|+.|--+....+|..||||++.+.....+.+..+|++++.+.+ |+||++++++|++. ...|+|||-|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd-----~~FYLVfEKm 158 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD-----TRFYLVFEKM 158 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc-----ceEEEEEecc
Confidence 57999999999999998899999999998887777889999999999995 99999999999987 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC---CeEEeeeccceec
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM---VAHVGDFGLAKFL 865 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~a~~~ 865 (1019)
.||+|...+.+... +++.+..++.++|+.||.|||.+ ||.|||+||+|||-.... -+|||||.++.-.
T Consensus 159 ~GGplLshI~~~~~------F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~ 229 (463)
T KOG0607|consen 159 RGGPLLSHIQKRKH------FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGI 229 (463)
T ss_pred cCchHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeecccccccc
Confidence 99999999988764 99999999999999999999999 999999999999997654 4899999987644
Q ss_pred cccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccH--------
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI-------- 932 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~-------- 932 (1019)
.....-...........+|+..|||||+.. ...|+.+.|.||||||+|-|++|.+||.+.-..+-.+
T Consensus 230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~ 309 (463)
T KOG0607|consen 230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRV 309 (463)
T ss_pred ccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHH
Confidence 222211122333344578999999999743 2358999999999999999999999998753322111
Q ss_pred -HHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 933 -HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 933 -~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+.....+.+...+..|. .......+-.+++...+..|+.+|- ++.+++.
T Consensus 310 CQ~~LFesIQEGkYeFPdk--------------------dWahIS~eakdlisnLlvrda~~rl-sa~~vln 360 (463)
T KOG0607|consen 310 CQNKLFESIQEGKYEFPDK--------------------DWAHISSEAKDLISNLLVRDAKQRL-SAAQVLN 360 (463)
T ss_pred HHHHHHHHHhccCCcCChh--------------------hhHHhhHHHHHHHHHHHhccHHhhh-hhhhccC
Confidence 111111122222222221 1123455567888888889999999 8888876
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.32 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=204.0
Q ss_pred CCCCCceeccccEEEEEEEeCCCC---EEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGG---LLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.+..+.||+|.||.|++|.|...+ ..||||.++..... ...+|.+|+.+|.+++|||++++||+..+. -.
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p~ 185 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------PA 185 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------hh
Confidence 445679999999999999996432 46999999866544 678999999999999999999999998763 35
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
.+|||.++.|+|.+.++... ...+.......++.|||.||+||.++ +.||||+..+|+++-....|||+|||+
T Consensus 186 mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGL 258 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGL 258 (1039)
T ss_pred hHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccc
Confidence 69999999999999999833 23488889999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
.+-+...+.... ......-...|+|||.+....++.++|||+|||++|||++ |..||.+... .
T Consensus 259 mRaLg~ned~Yv----m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~---------- 322 (1039)
T KOG0199|consen 259 MRALGENEDMYV----MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--I---------- 322 (1039)
T ss_pred eeccCCCCcceE----ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--H----------
Confidence 997754432221 1122334678999999999999999999999999999999 8889876311 1
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
.+.+.+|..- .-+..+.|.+.+++++..||...|++|| |+..+.+.+
T Consensus 323 --qIL~~iD~~e---------------rLpRPk~csedIY~imk~cWah~paDRp-tFsair~~~ 369 (1039)
T KOG0199|consen 323 --QILKNIDAGE---------------RLPRPKYCSEDIYQIMKNCWAHNPADRP-TFSAIREDL 369 (1039)
T ss_pred --HHHHhccccc---------------cCCCCCCChHHHHHHHHHhccCCccccc-cHHHHHHhH
Confidence 1222233111 1112245788999999999999999999 999998654
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=311.62 Aligned_cols=276 Identities=20% Similarity=0.282 Sum_probs=198.1
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.++|++.+.||+|+||.||+|..+.+++.||+|.+..... .....+.+|++++++++||||+++++++.+. ++.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK-----KTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC-----CeE
Confidence 3689999999999999999999988899999999875432 2234567899999999999999999998766 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||+++ +|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 79 ~lv~e~~~~-~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 79 TLVFEYLDT-DLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred EEEEecCCC-CHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccc
Confidence 999999974 99998876532 388999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
++...... .......++..|+|||+..+ ..++.++||||+||++|||++|+.||........ .........
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~~~ 221 (291)
T cd07844 150 ARAKSVPS-------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED-QLHKIFRVL 221 (291)
T ss_pred ccccCCCC-------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH-HHHHHHHhc
Confidence 86432111 11112346889999998865 4588999999999999999999999965432111 111111111
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCC------CCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGD------GRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.....+...... ..........+... ..... .....+.+++.+|++.+|++|| |++|+++
T Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~~p~~Rp-s~~e~l~ 287 (291)
T cd07844 222 GTPTEETWPGVS-SNPEFKPYSFPFYPPRPLINHAPRL-DRIPHGEELALKFLQYEPKKRI-SAAEAMK 287 (291)
T ss_pred CCCChhhhhhhh-hccccccccccccCChhHHHhCcCC-CCchhHHHHHHHHhccCccccc-CHHHHhc
Confidence 111000000000 00000000000000 00000 0124568999999999999999 9999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=304.47 Aligned_cols=255 Identities=28% Similarity=0.417 Sum_probs=201.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|.+.+.||+|+||.||+|....+++.||+|+++.... ...+.+.+|++++++++|+||+++++++... +..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR-----EKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-----CEEE
Confidence 58889999999999999999988899999999975544 3567889999999999999999999987665 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||+++++|.+++..... +++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGRI------LDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhcCC------CChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 99999999999999986542 78899999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE---ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.......... ........++..|+|||++.+.. ++.++||||||+++||+++|+.||....... ......
T Consensus 147 ~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~----~~~~~~ 219 (264)
T cd06626 147 VKLKNNTTTM---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF----QIMFHV 219 (264)
T ss_pred cccCCCCCcc---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----HHHHHH
Confidence 8653322111 11012356789999999988766 8899999999999999999999996532111 111100
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... ..+.+ | ........+.+++.+||+.+|.+|| +++|++.
T Consensus 220 ~~~-----~~~~~-----------~------~~~~~~~~~~~li~~~l~~~p~~R~-~~~~i~~ 260 (264)
T cd06626 220 GAG-----HKPPI-----------P------DSLQLSPEGKDFLDRCLESDPKKRP-TASELLQ 260 (264)
T ss_pred hcC-----CCCCC-----------C------cccccCHHHHHHHHHHccCCcccCC-CHHHHhc
Confidence 000 00000 0 0011244568999999999999999 9999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=310.94 Aligned_cols=277 Identities=21% Similarity=0.300 Sum_probs=197.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++++|.+.+.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++|+||+++++++... ..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-----~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK-----ET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC-----Ce
Confidence 45789999999999999999999988899999999865432 2234678899999999999999999998765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+||||++ +++.+++..... .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 899999995 688777754321 278888999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
+++..... ........+++.|+|||++.+. .++.++||||+||++|||++|..||.........+.+ ....
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~-~~~~ 220 (291)
T cd07870 149 LARAKSIP-------SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEK-IWTV 220 (291)
T ss_pred cccccCCC-------CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHH-HHHH
Confidence 98753211 1111234568999999998754 5788999999999999999999999754322111111 1111
Q ss_pred CCcchhhccChhhh--hhhhccCCCCCCCCC----CccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLL--LEVRTNNSKNPCGDG----RGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~--~~~~~~~~~~p~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
......... +.+. ..+.... ...+... ..........+.+++.+|++.||.+|| |++|++.
T Consensus 221 ~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-t~~~~l~ 287 (291)
T cd07870 221 LGVPTEDTW-PGVSKLPNYKPEW-FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRI-SAQDALL 287 (291)
T ss_pred cCCCChhhh-hhhhhcccccchh-ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCc-CHHHHhc
Confidence 110000000 0000 0000000 0000000 000000134568899999999999999 9999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=305.86 Aligned_cols=248 Identities=25% Similarity=0.333 Sum_probs=200.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
-|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++... ...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-----CeEEE
Confidence 4778899999999999999998889999999986433 33456788999999999999999999999876 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++++|.+++.... +++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 80 v~e~~~~~~l~~~i~~~~-------~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 80 IMEYLGGGSALDLLEPGP-------LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEeCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 999999999999987532 88999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
...... .......++..|+|||...+..++.++||||+||++|+|++|..||..... ...... ....
T Consensus 150 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~-~~~~ 216 (277)
T cd06641 150 QLTDTQ-------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFL-IPKN 216 (277)
T ss_pred ecccch-------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHH-HhcC
Confidence 653211 111234678899999999888889999999999999999999999864221 111110 0000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. +.+ .......+.+++.+||+.+|.+|| +++++++.
T Consensus 217 ~~----~~~-------------------~~~~~~~~~~~i~~~l~~~p~~Rp-~~~~~l~~ 253 (277)
T cd06641 217 NP----PTL-------------------EGNYSKPLKEFVEACLNKEPSFRP-TAKELLKH 253 (277)
T ss_pred CC----CCC-------------------CcccCHHHHHHHHHHccCChhhCc-CHHHHHhC
Confidence 00 000 011245578999999999999999 99999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=306.66 Aligned_cols=244 Identities=23% Similarity=0.262 Sum_probs=185.6
Q ss_pred ceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHh---cCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALR---NIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.||+|+||.||+|.+..+++.||+|.+.... ......+.+|..+++ ..+||+++.+++++... +..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP-----DKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC-----CeEEEE
Confidence 4899999999999998889999999986432 111223344444433 34799999999988776 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
|||+++++|.+++..... +++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~~~------l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQHGV------FSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 999999999999876543 89999999999999999999999 999999999999999999999999999875
Q ss_pred ccccCCCCCCCCCcccccccCCcccCccccc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
.... ......|+..|+|||... +..++.++||||+||++|||++|..||.................
T Consensus 147 ~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---- 213 (279)
T cd05633 147 FSKK---------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---- 213 (279)
T ss_pred cccc---------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc----
Confidence 4211 112346899999999886 45689999999999999999999999975432211111100000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhH----hHHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTL----EMRNVVAK 1004 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~----s~~evl~~ 1004 (1019)
.+..+ | .....++.+++.+|++.||++||. |++|+++.
T Consensus 214 ----~~~~~-----------~--------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 214 ----VNVEL-----------P--------DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ----CCcCC-----------c--------cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00000 0 112446789999999999999992 38888774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=309.15 Aligned_cols=254 Identities=22% Similarity=0.311 Sum_probs=193.5
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHH-HhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEA-LRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|+||.||+|++..+|+.||+|+++... .....++..|+.+ ++..+|||++++++++... ...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~-----~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE-----GDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC-----CcE
Confidence 47889999999999999999999899999999987542 2223455556665 5667899999999999765 568
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++ ++|.+++...... ...+++..++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999996 6898888654321 234899999999999999999999853 899999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG----SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
+...... .......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||..............
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~- 221 (283)
T cd06617 151 SGYLVDS--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV- 221 (283)
T ss_pred ccccccc--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-
Confidence 8754221 11122457889999998765 4568899999999999999999999964222111111100
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. . ..+.+ | .......+.+++.+||+.+|++|| +++++++
T Consensus 222 ~---~-----~~~~~-----------~-------~~~~~~~l~~li~~~l~~~p~~Rp-~~~~il~ 260 (283)
T cd06617 222 E---E-----PSPQL-----------P-------AEKFSPEFQDFVNKCLKKNYKERP-NYPELLQ 260 (283)
T ss_pred h---c-----CCCCC-----------C-------ccccCHHHHHHHHHHccCChhhCc-CHHHHhc
Confidence 0 0 00000 0 011245678999999999999999 9999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=307.24 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=199.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.|...+.||+|++|.||+|.+..+++.||+|+++.......+.+.+|+.+++.++|||++++++++... +..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~-----~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG-----DELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC-----CeEEEE
Confidence 355567999999999999999888999999998765555556788999999999999999999998765 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
+||+++++|.+++.... +++..+..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHTR-------MNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 99999999999987632 88999999999999999999999 999999999999999999999999998865
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
.... ........|++.|+|||...+..++.++||||+||++|||++|+.||..... .+........
T Consensus 165 ~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~-- 230 (285)
T cd06648 165 VSKE-------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDN-- 230 (285)
T ss_pred hccC-------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhc--
Confidence 4221 1112234688999999999888899999999999999999999999864211 1111110000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..+... ........+.+++.+||+.+|++|| +++++++
T Consensus 231 ---~~~~~~-----------------~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~il~ 268 (285)
T cd06648 231 ---LPPKLK-----------------NLHKVSPRLRSFLDRMLVRDPAQRA-TAAELLN 268 (285)
T ss_pred ---CCCCCc-----------------ccccCCHHHHHHHHHHcccChhhCc-CHHHHcc
Confidence 000000 0011234689999999999999999 9999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=305.26 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=198.8
Q ss_pred CCCCCCceeccccEEEEEEEeCC-CCEEEEEEEeecc----------cchhhHHHHHHHHHHhc-CCCCCcceEEEEEec
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGE-GGLLVAVKVLNLT----------RKGAFKSFVAECEALRN-IRHRNLIKIITICSS 772 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 772 (1019)
+|++.+.||+|+||.||+|.+.. .++.+|+|.+... ......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999986 6789999988532 12234557788888865 799999999999877
Q ss_pred CCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCCC
Q 001738 773 IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDHD 851 (1019)
Q Consensus 773 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~ 851 (1019)
. +..++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+ . +++||||+|+||+++.+
T Consensus 81 ~-----~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 81 N-----DRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred C-----CeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 6 6789999999999999988643211 2248999999999999999999996 5 89999999999999999
Q ss_pred CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 001738 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLT 931 (1019)
Q Consensus 852 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~ 931 (1019)
+.+||+|||.+....... ......|+..|+|||...+..++.++||||||+++|||++|+.||....
T Consensus 151 ~~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~----- 217 (269)
T cd08528 151 DKVTITDFGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN----- 217 (269)
T ss_pred CcEEEecccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----
Confidence 999999999997643211 2234568899999999998889999999999999999999999986421
Q ss_pred HHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHH
Q 001738 932 IHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLC 1006 (1019)
Q Consensus 932 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~ 1006 (1019)
............. .|... ......+.+++.+||+.||++|| ++.|+.++++
T Consensus 218 ~~~~~~~~~~~~~------------------~~~~~-----~~~~~~l~~li~~cl~~~p~~Rp-~~~e~~~~~~ 268 (269)
T cd08528 218 MLSLATKIVEAVY------------------EPLPE-----GMYSEDVTDVITSCLTPDAEARP-DIIQVSAMIS 268 (269)
T ss_pred HHHHHHHHhhccC------------------CcCCc-----ccCCHHHHHHHHHHCCCCCccCC-CHHHHHHHhc
Confidence 1111111100000 00000 01234578999999999999999 9999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=309.66 Aligned_cols=274 Identities=22% Similarity=0.294 Sum_probs=202.3
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|++++++++|+||+++++++... +..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK-----GRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-----CEE
Confidence 4789999999999999999999988999999998743 233457789999999999999999999999775 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++++.+..+..... .+++..+..++.||+.|++|||+. +++||||+|+||+++.++.+||+|||.
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASPG------GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 99999999877776665433 289999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH--H
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM--K 938 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~ 938 (1019)
+....... ........++..|+|||++.+. .++.++||||+|+++|+|++|++||......+ ....... .
T Consensus 147 ~~~~~~~~------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~ 219 (288)
T cd07833 147 ARALRARP------ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLG 219 (288)
T ss_pred ccccCCCc------cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 98653221 1122235678999999999887 78999999999999999999999997532111 1111000 0
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccH-----HHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGI-----EECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..+.......... ..+. ....+........ ..+..++.+++.+||+.+|++|| |++++++
T Consensus 220 ~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~~il~ 284 (288)
T cd07833 220 PLPPSHQELFSSN--PRFA--GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERL-TCDELLQ 284 (288)
T ss_pred CCCHHHhhhcccC--cccc--ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcc-cHHHHhc
Confidence 1111111110000 0000 0000000000000 11256789999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=337.22 Aligned_cols=266 Identities=22% Similarity=0.336 Sum_probs=195.3
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCC-----
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICSSID----- 774 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 774 (1019)
+-..+|+..+.||+||||.||+++.+-+|+.||||.+... +......+.+|+..+++++|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4456788899999999999999999999999999999754 3444567889999999999999999985322110
Q ss_pred ------------------------------------------------C-------------------------------
Q 001738 775 ------------------------------------------------S------------------------------- 775 (1019)
Q Consensus 775 ------------------------------------------------~------------------------------- 775 (1019)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred -C-----------------------------CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHH
Q 001738 776 -H-----------------------------GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825 (1019)
Q Consensus 776 -~-----------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L 825 (1019)
. .....||-||||+.-++.++++.+.... .....+++++||++||
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-----~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-----QRDEAWRLFREILEGL 710 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-----hhHHHHHHHHHHHHHH
Confidence 0 0025688999999989999888776311 3567899999999999
Q ss_pred HHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc----c-------cCCCCCCCCCcccccccCCcccCcccc
Q 001738 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY----T-------CQVDDVETPSSSIGIKGTVGYVAPEYG 894 (1019)
Q Consensus 826 ~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~----~-------~~~~~~~~~~~~~~~~gt~~y~aPE~~ 894 (1019)
+|+|++ |||||||||.||++++++.|||+|||+|.... . ............++.+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 0 111111122245678999999999998
Q ss_pred cCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCcc
Q 001738 895 MGSE---ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGG 971 (1019)
Q Consensus 895 ~~~~---~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~ 971 (1019)
.+.. |+.|+|+||+|||++||+. ||....+....+.......+|.. .+..++.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~-------------------- 843 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPE-------------------- 843 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccccc--------------------
Confidence 7654 9999999999999999984 56532111111111011111111 1111111
Q ss_pred HHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 972 IEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 972 ~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...=..++.+++++||.+|| ||.|++.
T Consensus 844 ----~~~e~slI~~Ll~hdP~kRP-tA~eLL~ 870 (1351)
T KOG1035|consen 844 ----HPEEASLIRWLLSHDPSKRP-TATELLN 870 (1351)
T ss_pred ----chHHHHHHHHHhcCCCccCC-CHHHHhh
Confidence 12236788999999999999 9999986
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=310.21 Aligned_cols=271 Identities=23% Similarity=0.321 Sum_probs=197.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-----CcEE
Confidence 4888999999999999999998899999999986443 22345788999999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999995 689998876432 2389999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh-C
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA-L 940 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~ 940 (1019)
....... .......++..|+|||+..+.. ++.++|||||||++|||++|+.||...... ....+..... .
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~ 219 (284)
T cd07860 148 RAFGVPV-------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGT 219 (284)
T ss_pred hhcccCc-------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 7542211 1112235688999999877644 688999999999999999999999753211 1111111110 0
Q ss_pred Ccc-hhhccChhhhhhhhccCCCCCCCCCCccHH----HHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQR-VIEIVDPLLLLEVRTNNSKNPCGDGRGGIE----ECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~-~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+.. ....+... ..+.. ..|.. ...... .....+.+++.+||+.||.+|| |++|+++
T Consensus 220 ~~~~~~~~~~~~--~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-t~~~~l~ 280 (284)
T cd07860 220 PDEVVWPGVTSL--PDYKP---SFPKW-ARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI-SAKAALA 280 (284)
T ss_pred CChhhhhhhhHH--HHHHh---hcccc-cccCHHHHcccCCHHHHHHHHHhcCCCcccCC-CHHHHhc
Confidence 000 00000000 00000 00000 000001 1234568899999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=313.09 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=208.4
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
..+.|.+.+.||+|.|++|.+|++..++..||||++++..- ...+.+.+|+++|+.++|||||+++.+.+.. .
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~-----~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE-----A 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-----c
Confidence 45789999999999999999999999999999999986533 2345588999999999999999999999987 7
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..|+||||+.+|.+.+++..+.. +.+.....++.|+.+|++|+|++ .|||||||++||+++.+.++||+||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred eeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecc
Confidence 89999999999999999998875 66788899999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|++.++.. .......+|++.|+|||++.+.+| ++++|+||+|+++|-|+.|..||++..-.
T Consensus 200 gfS~~~~~--------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---------- 261 (596)
T KOG0586|consen 200 GFSTFFDY--------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---------- 261 (596)
T ss_pred ccceeecc--------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc----------
Confidence 99998742 233445789999999999999876 78999999999999999999999863221
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
+.-++.+...++. |.. ....+.+++.+++-.+|.+|+ +++++.+.-
T Consensus 262 -------~Lr~rvl~gk~rI-----p~~--------ms~dce~lLrk~lvl~Pskr~-~~dqim~~~ 307 (596)
T KOG0586|consen 262 -------ELRPRVLRGKYRI-----PFY--------MSCDCEDLLRKFLVLNPSKRG-PCDQIMKDR 307 (596)
T ss_pred -------cccchheeeeecc-----cce--------eechhHHHHHHhhccCccccC-CHHHhhhhc
Confidence 1111112111110 100 122357888899999999999 999997754
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=302.52 Aligned_cols=252 Identities=21% Similarity=0.263 Sum_probs=194.8
Q ss_pred HHHHHHhhCCCCCCCce--eccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEec
Q 001738 696 YAELSKATGEFSTSNMI--GQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSS 772 (1019)
Q Consensus 696 ~~~~~~~~~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 772 (1019)
..+.....++|++.+.+ |+|+||.||+++.+.+++.+|+|++....... .|+.....+ +|||++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec
Confidence 34455556788888887 99999999999999899999999987542221 122222222 69999999999987
Q ss_pred CCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC
Q 001738 773 IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM 852 (1019)
Q Consensus 773 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 852 (1019)
. +..++||||+++++|.+++.... .+++..+..++.|+++|++|||+. +++||||||+||+++.++
T Consensus 81 ~-----~~~~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 81 L-----KGHVLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK 146 (267)
T ss_pred C-----CeeEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence 6 67899999999999999998754 289999999999999999999999 999999999999999998
Q ss_pred -CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 001738 853 -VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLT 931 (1019)
Q Consensus 853 -~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~ 931 (1019)
.++|+|||.+...... ....|+..|+|||++.+..++.++||||+||++|||++|+.||.....+...
T Consensus 147 ~~~~l~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~ 215 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD 215 (267)
T ss_pred CeEEEecCccceecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh
Confidence 9999999998754211 1235789999999999889999999999999999999999999754332222
Q ss_pred HHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 932 IHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 932 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...+.... ... .. ........+.+++.+||+.+|.+||.+++|+++
T Consensus 216 ~~~~~~~~-~~~-~~------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 216 LESLLKRQ-QKK-LP------------------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHhh-ccc-CC------------------------cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 22111111 000 00 001224457899999999999999933588874
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=304.48 Aligned_cols=261 Identities=23% Similarity=0.302 Sum_probs=204.7
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
++|++.+.||.|+||+||+|....++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+... ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG-----DELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-----CEEE
Confidence 47899999999999999999998889999999986432 23557789999999999999999999988765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 99999999999999976432 12389999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
......... .........|+..|+|||++... .++.++|||||||++|||++|+.||...... ....+...
T Consensus 150 ~~~~~~~~~---~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~---- 221 (267)
T cd06610 150 ASLADGGDR---TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQ---- 221 (267)
T ss_pred HHhccCccc---cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhc----
Confidence 765432211 00122345689999999998776 7899999999999999999999999653221 11111100
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. .+.+ ............+.+++.+||+.||++|| +++|+++
T Consensus 222 ~~-----~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~ll~ 263 (267)
T cd06610 222 ND-----PPSL--------------ETGADYKKYSKSFRKMISLCLQKDPSKRP-TAEELLK 263 (267)
T ss_pred CC-----CCCc--------------CCccccccccHHHHHHHHHHcCCChhhCc-CHHHHhh
Confidence 00 0000 00000123345678999999999999999 9999976
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=309.64 Aligned_cols=281 Identities=19% Similarity=0.238 Sum_probs=200.5
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++++++ ||||+++++++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46899999999999999999999899999999986442 223456788999999995 699999999987764433345
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCCeEEeee
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDF 859 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Df 859 (1019)
.|+||||+++ ++.+++...... ....+++..++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999975 898888754322 123489999999999999999999999 9999999999999998 899999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.+....... .......+++.|+|||++.+ ..++.++|||||||++|||++|..||....... ...... .
T Consensus 156 g~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~-~ 226 (295)
T cd07837 156 GLGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIF-K 226 (295)
T ss_pred ccceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHH-H
Confidence 9987542211 11122356888999998765 457999999999999999999999997532111 111111 1
Q ss_pred hCCcc----hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQR----VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... +.....-.....+ ....|.. ..........++.+++.+||++||.+|| +++|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~R~-~~~eil~ 290 (295)
T cd07837 227 LLGTPTEQVWPGVSKLRDWHEF---PQWKPQD-LSRAVPDLSPEGLDLLQKMLRYDPAKRI-SAKAALT 290 (295)
T ss_pred HhCCCChhhCcchhhccchhhc---Ccccchh-HHHhccccCHHHHHHHHHHccCChhhcC-CHHHHhc
Confidence 10000 0000000000000 0000000 0001112355688999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=303.29 Aligned_cols=238 Identities=24% Similarity=0.452 Sum_probs=188.5
Q ss_pred CceeccccEEEEEEEeCCCC----------EEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 710 NMIGQGSFGFVYRGILGEGG----------LLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+.||+|+||.||+|.+..++ ..|++|++...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46999999999999997666 45888887654433 5788899999999999999999998866 2
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-------
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM------- 852 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~------- 852 (1019)
..++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 35899999999999999987542 389999999999999999999999 999999999999999887
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC--CCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS--EASMAGDVYSFGILLLEMFI-RKRPTDSMFNDG 929 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~ 929 (1019)
.+||+|||++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||......
T Consensus 146 ~~kl~Dfg~a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~- 213 (259)
T cd05037 146 FIKLSDPGIPITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS- 213 (259)
T ss_pred eEEeCCCCccccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-
Confidence 799999999975422 1123567789999998876 78999999999999999999 57777553211
Q ss_pred ccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 930 LTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
....... .. ...|.. . ...+.+++.+||..+|.+|| |+.|+++.|
T Consensus 214 -~~~~~~~-----------~~----------~~~~~~---~-----~~~~~~li~~~l~~~p~~Rp-t~~~il~~l 258 (259)
T cd05037 214 -EKERFYQ-----------DQ----------HRLPMP---D-----CAELANLINQCWTYDPTKRP-SFRAILRDL 258 (259)
T ss_pred -hHHHHHh-----------cC----------CCCCCC---C-----chHHHHHHHHHhccChhhCC-CHHHHHHhc
Confidence 1111000 00 000000 0 14578999999999999999 999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=319.32 Aligned_cols=286 Identities=23% Similarity=0.239 Sum_probs=206.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.++|.+.+.||+|+||+||+|++..+++.||||.++.. .......+.+|+.+++.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45799999999999999999999989999999998643 2333456778999999999999999999887654333356
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+|+||+. ++|.+++..... +++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~------l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQT------LSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999995 789998876542 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
+++...... .......++..|+|||.+.+ ..++.++|||||||++|+|++|++||..... ..........
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~ 224 (337)
T cd07858 154 LARTTSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQLKLITEL 224 (337)
T ss_pred cccccCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHH
Confidence 997643211 11223467889999998765 4689999999999999999999999965321 1111111111
Q ss_pred C---Ccc-hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH--HHHHH
Q 001738 940 L---PQR-VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK--LCAAR 1009 (1019)
Q Consensus 940 ~---~~~-~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~--L~~i~ 1009 (1019)
. ++. .....+....... ......+..........+..++.+++.+||+.+|++|| |++|+++. ++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-s~~ell~h~~~~~~~ 298 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARRYI-RSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRI-TVEEALAHPYLASLH 298 (337)
T ss_pred hCCCChHHhhhcCchhhhHHH-HhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhcc-CHHHHHcCcchhhhc
Confidence 1 111 1111111111000 00000000000000112456689999999999999999 99999886 55543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=302.54 Aligned_cols=202 Identities=27% Similarity=0.370 Sum_probs=178.3
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.+.|+.-++||+||||+||-++.+.+|+.||.|.+.+.. +.......+|-.++.++..+.||.+-..|++. +
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-----d 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-----D 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC-----C
Confidence 457888899999999999999999999999999885332 22334567899999999999999998888887 7
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..|+|+..|.||+|.-++.+.+. ..+++..++.++.+|+.||++||+. +||+||+||+|||+|++|+++|+|+
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 79999999999999988887764 3499999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
|+|..+.... ...+.+||.+|||||++.++.|+...|.||+||++|||+.|+.||..
T Consensus 332 GLAvei~~g~--------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 332 GLAVEIPEGK--------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred ceEEecCCCC--------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 9998764322 23345899999999999999999999999999999999999999965
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=317.56 Aligned_cols=284 Identities=21% Similarity=0.264 Sum_probs=205.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.++|++.+.||+|+||.||+|....+++.||+|++.... ....+.+.+|+.++++++||||+++++++..... ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA-DFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC-CCce
Confidence 368999999999999999999999899999999987542 2345677889999999999999999998765432 2257
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||++ ++|.+++..... +++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~------~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQP------LTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCC------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 899999995 689998875442 89999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
++......... .........|+..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 153 ~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~ 227 (334)
T cd07855 153 MARGLSSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSV 227 (334)
T ss_pred cceeecccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHH
Confidence 99765332211 1112234578999999998765 46899999999999999999999999753221 111111111
Q ss_pred CCcchhhccC----hhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVD----PLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d----~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
......+..+ ..+..... .....+..............+.+++.+||+.+|.+|| ++++++..
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-t~~~~l~~ 294 (334)
T cd07855 228 LGSPSEEVLNRIGSDRVRKYIQ-NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI-TVEQALQH 294 (334)
T ss_pred hCCChhHhhhhhchhhHHHHHh-hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCc-CHHHHHhC
Confidence 1111111111 11100000 0000000000000012356789999999999999999 99998874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=305.37 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=198.3
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCC---CCCcceEEEEEecCCCCCcce
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIR---HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+++.+|+.++++++ |||++++++++... ..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~-----~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG-----PR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC-----CE
Confidence 477889999999999999999889999999998754 3344567889999999996 99999999998765 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+++++|.++++.. .+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999998654 289999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.+....... .......|+..|+|||...++ .++.++|||||||++|+|++|..||...... .....
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~- 213 (277)
T cd06917 147 VAALLNQNS-------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMML- 213 (277)
T ss_pred ceeecCCCc-------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhc-
Confidence 998653221 112234688999999987654 5689999999999999999999999653111 00000
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.. ....+.+ .. ......+.+++.+||+.||++|| ++.|+++.
T Consensus 214 ~~----~~~~~~~---------------~~---~~~~~~~~~~i~~~l~~~p~~R~-~~~~il~~ 255 (277)
T cd06917 214 IP----KSKPPRL---------------ED---NGYSKLLREFVAACLDEEPKERL-SAEELLKS 255 (277)
T ss_pred cc----cCCCCCC---------------Cc---ccCCHHHHHHHHHHcCCCcccCc-CHHHHhhC
Confidence 00 0000000 00 01245678999999999999999 99999773
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=306.33 Aligned_cols=248 Identities=26% Similarity=0.325 Sum_probs=199.7
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
+|++.+.||.|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE-----ENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC-----CeE
Confidence 4888999999999999999998889999999997432 23457889999999999999999999988765 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++|+||+++++|.+++.... ++++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 99999999999999997653 289999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... ......|+..|+|||...+..++.++||||+|+++|+|++|..||...... ..........
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~ 215 (258)
T cd05578 147 ATKVTPDT--------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQE 215 (258)
T ss_pred ccccCCCc--------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhc
Confidence 87653211 122346788999999998888999999999999999999999999754322 1111111100
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH--HHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM--RNVV 1002 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~--~evl 1002 (1019)
.. .... | ......+.+++.+||+.||.+|| ++ +|++
T Consensus 216 ~~-~~~~---------------~--------~~~~~~~~~~i~~~l~~~p~~R~-~~~~~~l~ 253 (258)
T cd05578 216 TA-DVLY---------------P--------ATWSTEAIDAINKLLERDPQKRL-GDNLKDLK 253 (258)
T ss_pred cc-cccC---------------c--------ccCcHHHHHHHHHHccCChhHcC-CccHHHHh
Confidence 00 0000 0 11235678999999999999999 88 6654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=306.88 Aligned_cols=247 Identities=25% Similarity=0.314 Sum_probs=195.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..|++.+.||+|+||+||+|++..+++.||+|++.... ....+++.+|+++++.++|||++++.+++... +.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE-----HT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC-----Ce
Confidence 46889999999999999999998889999999986432 23345788999999999999999999999876 66
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||++ |++.+++..... .+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 899999996 577777754332 389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
++..... .....+++.|+|||++. ...++.++||||||+++|||++|+.||..... .....
T Consensus 161 ~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----~~~~~ 224 (307)
T cd06607 161 SASLVSP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALY 224 (307)
T ss_pred cceecCC-----------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----HHHHH
Confidence 9875421 11346788999999874 45688999999999999999999999864211 00000
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...... .| .....++...+.+++.+||+.+|++|| ++++++..
T Consensus 225 ~~~~~~-------------------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~~ 267 (307)
T cd06607 225 HIAQND-------------------SP----TLSSNDWSDYFRNFVDSCLQKIPQDRP-SSEELLKH 267 (307)
T ss_pred HHhcCC-------------------CC----CCCchhhCHHHHHHHHHHhcCChhhCc-CHHHHhcC
Confidence 000000 00 000112355689999999999999999 99999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=316.60 Aligned_cols=279 Identities=21% Similarity=0.203 Sum_probs=203.4
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-Cc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-GV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 778 (1019)
..++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.++++++||||+++++++...... ..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 357899999999999999999999989999999998643 233345677899999999999999999988654321 22
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+||||++ ++|.+.+... +++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 46799999995 5888877532 78889999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||.++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||..... .........
T Consensus 162 fg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~--~~~~~~~~~ 231 (353)
T cd07850 162 FGLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH--IDQWNKIIE 231 (353)
T ss_pred CccceeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHH
Confidence 99998642211 12234678999999999999999999999999999999999999975321 111111111
Q ss_pred hCC---cchhhccChhhhhhhhccCCC-------------CCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 939 ALP---QRVIEIVDPLLLLEVRTNNSK-------------NPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 939 ~~~---~~~~~~~d~~l~~~~~~~~~~-------------~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
... ..+.+.+++............ .|... ..........+.+++.+||+.||++|| |++|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~-t~~eiL 309 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDS-ESHNKLKASQARDLLSKMLVIDPEKRI-SVDDAL 309 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccc-ccccccchhHHHHHHHHHcCCChhhCc-CHHHHh
Confidence 111 111111111111111000000 00000 000112245678999999999999999 999998
Q ss_pred HH
Q 001738 1003 AK 1004 (1019)
Q Consensus 1003 ~~ 1004 (1019)
+.
T Consensus 310 ~~ 311 (353)
T cd07850 310 QH 311 (353)
T ss_pred cC
Confidence 64
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=307.96 Aligned_cols=272 Identities=23% Similarity=0.293 Sum_probs=197.6
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|++.+.||+|++|.||+|.+..+|+.||+|++.... ....+.+.+|++++++++|||++++++++... +..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-----~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-----NKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-----CeEEE
Confidence 678899999999999999998899999999987543 22345688899999999999999999998765 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||++ ++|.+++..... ..+++..++.++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999995 699999876542 2389999999999999999999999 99999999999999999999999999987
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC-C
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL-P 941 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-~ 941 (1019)
...... .......++..|+|||++.+. .++.++||||+|+++|||++|+.||...... ........... +
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~ 219 (283)
T cd07835 148 AFGVPV-------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTP 219 (283)
T ss_pred ccCCCc-------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 542111 111223568899999987664 5789999999999999999999999753211 11111111100 0
Q ss_pred cc-hhhcc--ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QR-VIEIV--DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~-~~~~~--d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. ..... .+...... ...+..............+.+++.+|++.||++|| |++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-t~~~il~ 279 (283)
T cd07835 220 DEDVWPGVTSLPDYKPTF----PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI-SAKAALQ 279 (283)
T ss_pred ChHHhhhhhhchhhhhhc----ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc-CHHHHhc
Confidence 00 00000 00000000 00000000000011234678999999999999999 9999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=311.34 Aligned_cols=278 Identities=25% Similarity=0.313 Sum_probs=200.7
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.++|++.+.||+|+||.||+|.+..+|+.||+|+++.... .....+.+|+.++++++|+|++++++++..... +.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHL---DS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCC---Ce
Confidence 4689999999999999999999998999999999874432 223456789999999999999999999875432 45
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||++ ++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 799999996 58988887643 2389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.+....... .......++..|+|||.+.+ ..++.++||||+||++|||++|++||..... ..........
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~ 224 (309)
T cd07845 154 LARTYGLPA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQL 224 (309)
T ss_pred eeeecCCcc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHh
Confidence 998653211 11122345788999998865 4578999999999999999999999975321 1122222221
Q ss_pred CCcchhhc---cCh-hhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEI---VDP-LLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~---~d~-~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
........ ++. .....+. ....+..............+.+++.+|++.||++|| |++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~-t~~~il~h 290 (309)
T cd07845 225 LGTPNESIWPGFSDLPLVGKFT--LPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRA-TAEEALES 290 (309)
T ss_pred cCCCChhhchhhhccccccccc--ccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCc-CHHHHhcC
Confidence 11111110 000 0000000 000000000000111245678999999999999999 99999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=300.01 Aligned_cols=254 Identities=22% Similarity=0.293 Sum_probs=198.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-----cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-----RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
.+|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~--- 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE--- 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC---
Confidence 4789999999999999999999889999999987532 12344678899999999999999999998866432
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++|+||+++++|.+++..... +++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~~------l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYGA------LTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 467899999999999999876542 78999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
||.++....... .........|+..|+|||.+.+..++.++|||||||++|||++|+.||..... .+....
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~ 220 (264)
T cd06653 150 FGASKRIQTICM----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-----MAAIFK 220 (264)
T ss_pred cccccccccccc----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-----HHHHHH
Confidence 999976422110 11111235688999999999888899999999999999999999999964211 111111
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.........++ ....+.+.+++.+||+ +|..|| ++.+++.
T Consensus 221 ~~~~~~~~~~p-----------------------~~~~~~~~~~i~~~l~-~~~~r~-~~~~~~~ 260 (264)
T cd06653 221 IATQPTKPMLP-----------------------DGVSDACRDFLKQIFV-EEKRRP-TAEFLLR 260 (264)
T ss_pred HHcCCCCCCCC-----------------------cccCHHHHHHHHHHhc-CcccCc-cHHHHhc
Confidence 11111001111 1123557899999998 579999 9998765
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=311.37 Aligned_cols=281 Identities=17% Similarity=0.205 Sum_probs=195.9
Q ss_pred Cceecc--ccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQG--SFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
..||+| +||+||+|++..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++... +..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG-----SWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC-----CceEEEE
Confidence 456666 99999999999899999999987542 33456788999999999999999999999876 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+.++++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+...
T Consensus 79 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999887542 2389999999999999999999999 9999999999999999999999999865433
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh-C--
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS--EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA-L-- 940 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~-- 940 (1019)
..................++..|+|||++.+. .++.++||||+||++|||++|+.||........ ..+..... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~ 230 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSP 230 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCC
Confidence 21111100000111112356779999998764 478999999999999999999999976432111 11100000 0
Q ss_pred ------CcchhhccChh------hhhhhhccC---CCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 941 ------PQRVIEIVDPL------LLLEVRTNN---SKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 941 ------~~~~~~~~d~~------l~~~~~~~~---~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
+.......+.. +........ ..............+...+.+++.+||+.||++|| |++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp-ta~e~l~~ 308 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRP-SASSLLSH 308 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCC-CHHHHhhC
Confidence 00000000000 000000000 00000001112234567889999999999999999 99999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=308.43 Aligned_cols=277 Identities=22% Similarity=0.279 Sum_probs=199.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.++++++||||+++++++...+. ...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~---~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNL---DKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC---CcE
Confidence 578999999999999999999998899999999975432 223456789999999999999999998876532 578
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
|+||||++ ++|.+++..... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred EEEehhcC-cCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 99999997 599998876432 389999999999999999999999 999999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+....... .......+++.|+|||.+.+. .++.++||||+|+++|||++|++||..... ...........
T Consensus 153 ~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~ 223 (293)
T cd07843 153 AREYGSPL-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE--IDQLNKIFKLL 223 (293)
T ss_pred eeeccCCc-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHh
Confidence 88653211 111234578899999988764 468999999999999999999999975322 11111111111
Q ss_pred Ccc---hhhccChhhhhhhhccCCCCCCCCCCccHHH--HHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQR---VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEE--CLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~---~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~--~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... ............ .......+.......... ....+.+++.+||+.+|++|| |++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-t~~ell~ 289 (293)
T cd07843 224 GTPTEKIWPGFSELPGAK-KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRI-SAEDALK 289 (293)
T ss_pred CCCchHHHHHhhccchhc-ccccccccchhhhccccccCCChHHHHHHHHHhccCccccC-CHHHHhc
Confidence 110 000000000000 000000000000000011 245578999999999999999 9999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=307.02 Aligned_cols=256 Identities=22% Similarity=0.289 Sum_probs=205.6
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
...+.|++.+.+|+|+||.||+|.+..+++.||+|+++.... ..+.+.+|++.+++++|+|++++++++... ..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVG-----DE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CE
Confidence 455678899999999999999999988899999999986544 457788999999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++|+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccc
Confidence 899999999999999998764 1389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
.+....... .......++..|+|||++.+..++.++|||||||++|+|++|+.||...... ........
T Consensus 162 ~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~~~~~~~~-- 230 (286)
T cd06614 162 FAAQLTKEK-------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--RALFLITT-- 230 (286)
T ss_pred hhhhhccch-------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh--
Confidence 986542211 1112345788999999998888999999999999999999999998642111 00000000
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
..... ......+...+.+++.+||+.+|.+|| ++.++++.-
T Consensus 231 -~~~~~----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~il~~~ 271 (286)
T cd06614 231 -KGIPP----------------------LKNPEKWSPEFKDFLNKCLVKDPEKRP-SAEELLQHP 271 (286)
T ss_pred -cCCCC----------------------CcchhhCCHHHHHHHHHHhccChhhCc-CHHHHhhCh
Confidence 00000 000111345688999999999999999 999998743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=309.73 Aligned_cols=211 Identities=22% Similarity=0.362 Sum_probs=173.2
Q ss_pred CCCCCCceeccccEEEEEEEeCC--CCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGE--GGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+... .
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHAD---K 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCC---c
Confidence 47888999999999999999987 78999999997633 4445677889999999999999999999976532 5
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC----CCCeE
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH----DMVAH 855 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~k 855 (1019)
..++||||+++ ++.+++....... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 68999999964 7777775443211 23589999999999999999999999 9999999999999999 89999
Q ss_pred EeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFN 927 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~ 927 (1019)
|+|||++........ .........++..|+|||++.+. .++.++|||||||++|||++|++||.....
T Consensus 153 l~Dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 153 IGDLGLARLFNAPLK----PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred ECCCccccccCCCcc----cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 999999986532211 11122345678999999987664 578999999999999999999999976543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=305.39 Aligned_cols=272 Identities=21% Similarity=0.286 Sum_probs=199.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
+|++.+.||+|++|.||+|++..+|+.||||+++.... ...+.+.+|++++++++||||+++++++... +..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE-----NKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-----CcEEE
Confidence 58889999999999999999998999999999875432 3346677899999999999999999999876 66899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCCc-cHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 9999975 89988876542 23489999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh-CC
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA-LP 941 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~ 941 (1019)
...... .......++..|+|||++.+. .++.++||||+||++|||++|+.||...... .......... .+
T Consensus 149 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~ 220 (284)
T cd07836 149 AFGIPV-------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTP 220 (284)
T ss_pred hhcCCc-------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCC
Confidence 542211 111234568899999987664 5788999999999999999999999754221 1111111100 00
Q ss_pred cc--hhhccChhhhhhhhccCCCCCCCCC---CccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QR--VIEIVDPLLLLEVRTNNSKNPCGDG---RGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~--~~~~~d~~l~~~~~~~~~~~p~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. +..+... ..+. ...|.... ..........+.+++.+|++.||.+|| +++|+++
T Consensus 221 ~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~-~~~~~l~ 280 (284)
T cd07836 221 TESTWPGISQL---PEYK---PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRI-SAHDALQ 280 (284)
T ss_pred ChhhHHHHhcC---chhc---ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCC-CHHHHhc
Confidence 00 0000000 0000 00000000 000112345678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=308.72 Aligned_cols=281 Identities=19% Similarity=0.164 Sum_probs=194.0
Q ss_pred CCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 708 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.+.+|.| |.||.++...+++.||||++... .....+.+.+|++++++++||||+++++++... ...+++|
T Consensus 6 i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-----~~~~~~~ 78 (314)
T cd08216 6 IGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-----SELYVVS 78 (314)
T ss_pred hhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC-----CeEEEEE
Confidence 33444444 45555555558999999998754 344557889999999999999999999998776 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+...
T Consensus 79 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 79 PLMAYGSCEDLLKTHFP----EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred eccCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence 99999999999986532 2388999999999999999999999 9999999999999999999999999998765
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS--EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
..................++..|+|||++.+. .++.++||||+||++|||++|+.||....... ...+......+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 230 (314)
T cd08216 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKVRGTVPCL 230 (314)
T ss_pred ccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCccc
Confidence 32221111111122334578899999998763 58899999999999999999999997532211 1111111111110
Q ss_pred hhhccChhhhhhhhc-----cCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 944 VIEIVDPLLLLEVRT-----NNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~-----~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.....-+........ ....................+.+++.+||+.||++|| |++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-t~~~ll~~ 295 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP-SASQLLNH 295 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc-CHHHHhcC
Confidence 000000000000000 0000000111111223345788999999999999999 99999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=341.28 Aligned_cols=463 Identities=26% Similarity=0.353 Sum_probs=390.7
Q ss_pred eeccCCCccCCCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhhccccccccccccccccccccceeecccc
Q 001738 103 LIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADN 182 (1019)
Q Consensus 103 ~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~~L~l~~n 182 (1019)
.+|+++.++. .||..+-.-..|+.|++++|.+- ..|-.+.. +-.+|+.||+++|
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~------------------------~~v~L~~l~lsnn 55 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVE------------------------KRVKLKSLDLSNN 55 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhh------------------------heeeeEEeecccc
Confidence 4678888887 88988877777999999999775 33422210 1224999999999
Q ss_pred cccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceeccCCcccCCCCc
Q 001738 183 HLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPI 262 (1019)
Q Consensus 183 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~lp~ 262 (1019)
++. ..|..+..+.+|+.|+++.|.+. ..|.+.+++++|++|.|.+|++. ..|.++..+++|++|+++.|++. .+|.
T Consensus 56 ~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl 131 (1081)
T KOG0618|consen 56 QIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPL 131 (1081)
T ss_pred ccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCch
Confidence 998 89999999999999999999999 78999999999999999999999 89999999999999999999986 8888
Q ss_pred cccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCCCCCCCCcccc
Q 001738 263 DIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITP 342 (1019)
Q Consensus 263 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 342 (1019)
-+. .+..+..+..++|..... ++... ++.++|..|.+.+.++..+..++. .|+|.+|.+.. ..
T Consensus 132 ~i~-~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---------~d 194 (1081)
T KOG0618|consen 132 VIE-VLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---------LD 194 (1081)
T ss_pred hHH-hhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhhh---------hh
Confidence 776 678888999999933322 22222 899999999999999999988887 89999999873 34
Q ss_pred ccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCCchhhhccccc
Q 001738 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422 (1019)
Q Consensus 343 l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 422 (1019)
+.++.+|+.|....|++... ......++.|+.++|.+....+. ..-.+|++++++.|+++ .+|++++.+.+|
T Consensus 195 ls~~~~l~~l~c~rn~ls~l-----~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nl 266 (1081)
T KOG0618|consen 195 LSNLANLEVLHCERNQLSEL-----EISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANL 266 (1081)
T ss_pred hhhccchhhhhhhhcccceE-----EecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccc
Confidence 67899999999999998732 22223345688999998833332 23468999999999999 677999999999
Q ss_pred ceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhcccc-ccccccC
Q 001738 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTL-SLYLDLS 501 (1019)
Q Consensus 423 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~-~~~L~ls 501 (1019)
+.|+..+|++. .+|..+...++|+.|++..|.+. -+|.....++.|+.|+|..|+|. .+|+.++..... +..|+.+
T Consensus 267 e~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s 343 (1081)
T KOG0618|consen 267 EALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVS 343 (1081)
T ss_pred eEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhh
Confidence 99999999997 89999999999999999999998 78888999999999999999998 899988777665 6778888
Q ss_pred CCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCc
Q 001738 502 NNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQI 581 (1019)
Q Consensus 502 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 581 (1019)
.|++.......=..++.|+.|++.+|.++...-+.+.+..+|+.|+|++|+|.......+.++..|++|+||+|+|+ .+
T Consensus 344 ~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~L 422 (1081)
T KOG0618|consen 344 SNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TL 422 (1081)
T ss_pred hccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hh
Confidence 99987654333335678999999999999887778999999999999999998555557889999999999999999 78
Q ss_pred hhhhcccCccceEEccCCcCccccCCCCccCCccccccccCCcc
Q 001738 582 PKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKL 625 (1019)
Q Consensus 582 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~ 625 (1019)
|..+.++..|++|...+|++...+ ...+++.+..++++.|.-.
T Consensus 423 p~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 423 PDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred hHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhh
Confidence 999999999999999999999655 7788999999999888654
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=314.02 Aligned_cols=284 Identities=21% Similarity=0.282 Sum_probs=202.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 778 (1019)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++ +||||+++++++...+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~--- 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND--- 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC---
Confidence 346899999999999999999999888999999988532 233345677899999999 99999999998865432
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++||||++ ++|.+++.... +++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~~-------~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRANI-------LEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 46799999996 59999887642 78899999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||.+.......... .........|+..|+|||++.+ ..++.++||||||+++|||++|+.||....... ......
T Consensus 151 ~g~~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~--~~~~~~ 226 (337)
T cd07852 151 FGLARSLSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN--QLEKII 226 (337)
T ss_pred ccchhccccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHH
Confidence 99998653322110 1122234568999999998765 457899999999999999999999996532211 111111
Q ss_pred HhCCc---chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 938 KALPQ---RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 938 ~~~~~---~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..... .....+........-....................++.+++.+||+.||++|| |+.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp-s~~~il~~ 295 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL-TAEEALEH 295 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccccc-CHHHHhhC
Confidence 11110 00000000000000000000000000000111356789999999999999999 99999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=304.92 Aligned_cols=246 Identities=22% Similarity=0.326 Sum_probs=197.0
Q ss_pred CCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEee
Q 001738 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEY 787 (1019)
Q Consensus 708 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~ 787 (1019)
...+||+|+||.||+|....+++.||+|++..........+.+|+.+++.++|+|++++++++... +..++||||
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~ 98 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWVVMEF 98 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC-----CEEEEEEec
Confidence 346899999999999999889999999998755545556788999999999999999999998876 678999999
Q ss_pred ccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccc
Q 001738 788 MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYT 867 (1019)
Q Consensus 788 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 867 (1019)
+++++|.+++.... +++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||++.....
T Consensus 99 ~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 99 LEGGALTDIVTHTR-------MNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 168 (292)
T ss_pred CCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence 99999999886543 78999999999999999999999 999999999999999999999999999875422
Q ss_pred cCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhc
Q 001738 868 CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEI 947 (1019)
Q Consensus 868 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1019)
.. .......|++.|+|||...+..++.++||||+||++|||++|..||..... ...........+....
T Consensus 169 ~~-------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~-- 237 (292)
T cd06657 169 EV-------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLK-- 237 (292)
T ss_pred cc-------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccC--
Confidence 11 111234678999999999888899999999999999999999999864211 1111111111111100
Q ss_pred cChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 948 VDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 948 ~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
........+.+++.+||+.+|.+|| ++.|+++
T Consensus 238 -----------------------~~~~~~~~l~~li~~~l~~~P~~R~-~~~~ll~ 269 (292)
T cd06657 238 -----------------------NLHKVSPSLKGFLDRLLVRDPAQRA-TAAELLK 269 (292)
T ss_pred -----------------------CcccCCHHHHHHHHHHHhCCcccCc-CHHHHhc
Confidence 0011234568899999999999999 9999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=313.04 Aligned_cols=285 Identities=19% Similarity=0.204 Sum_probs=204.9
Q ss_pred HHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCC
Q 001738 697 AELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSID 774 (1019)
Q Consensus 697 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 774 (1019)
.++....++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 355667789999999999999999999998899999999987432 223456788999999999999999999886543
Q ss_pred CC-CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC
Q 001738 775 SH-GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV 853 (1019)
Q Consensus 775 ~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 853 (1019)
.. .....+++++++ +++|.++++... +++..++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 21 124568888887 789998886543 89999999999999999999999 9999999999999999999
Q ss_pred eEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 001738 854 AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~ 932 (1019)
+||+|||++..... ......++..|+|||...+ ..++.++||||+||++|||++|+.||...... ...
T Consensus 159 ~kl~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~ 227 (345)
T cd07877 159 LKILDFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQL 227 (345)
T ss_pred EEEecccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 99999999875321 1223467899999998766 46889999999999999999999999653221 111
Q ss_pred HHHHHHh--CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 933 HEFAMKA--LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 933 ~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
....... .+......+.......+.......|..............+.+++.+|++.||.+|| ++.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~-t~~e~l~h 300 (345)
T cd07877 228 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI-TAAQALAH 300 (345)
T ss_pred HHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC-CHHHHhcC
Confidence 1111111 11111111111111111100011111000000001234578999999999999999 99998864
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=278.94 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=196.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+.+....||.|.-|.||+++.+.+|...|||.+... ..++.+++...++++.+-. .|.||+.+|+|... ..++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n-----~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN-----TDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC-----chHH
Confidence 445667899999999999999999999999999754 4455677888888776664 89999999999887 5578
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+.||.| ....+.+++.... ++++..+-++...+++||.||.+++ +|+|||+||+|||+|+.|++|+||||.+
T Consensus 168 IcMelM-s~C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHH-HHHHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 899988 4566666665442 3888888899999999999999886 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG---SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
-.+-++. ..+...|-+.|||||.+.- ..|+.++||||||++++||+||+.||.....+...+.... ..
T Consensus 240 GrlvdSk--------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl-n~ 310 (391)
T KOG0983|consen 240 GRLVDSK--------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL-NE 310 (391)
T ss_pred ceeeccc--------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH-hc
Confidence 8764332 2334578899999998764 3689999999999999999999999987544322221111 11
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.| |.+ +. .+.+...+.+++..|+++|+.+|| ...++++
T Consensus 311 eP--------P~L--------------~~---~~gFSp~F~~fv~~CL~kd~r~RP-~Y~~Ll~ 348 (391)
T KOG0983|consen 311 EP--------PLL--------------PG---HMGFSPDFQSFVKDCLTKDHRKRP-KYNKLLE 348 (391)
T ss_pred CC--------CCC--------------Cc---ccCcCHHHHHHHHHHhhcCcccCc-chHHHhc
Confidence 11 111 11 112455678999999999999999 8888776
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=300.34 Aligned_cols=251 Identities=22% Similarity=0.342 Sum_probs=199.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|.+..+|..||+|.+.... ....+.+.+|++++++++|+|++++++.+... ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN-----GRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-----CeEE
Confidence 5788899999999999999999899999999987542 23346778999999999999999999988765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-CeEEeeecc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-VAHVGDFGL 861 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~ 861 (1019)
+|+||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++ .+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 99999999999999976432 2379999999999999999999999 999999999999999886 469999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
+....... .......|++.|+|||+..+..++.++|||||||++|||++|+.||.... ..+.......
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~ 216 (257)
T cd08225 149 ARQLNDSM-------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQ 216 (257)
T ss_pred chhccCCc-------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhc
Confidence 87653211 11122458899999999988889999999999999999999999986421 1222221111
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
..... .. ......+.+++.+||+.+|++|| |++|+++.
T Consensus 217 ~~~~~-~~-----------------------~~~~~~~~~~i~~~l~~~p~~Rp-t~~~ll~~ 254 (257)
T cd08225 217 GYFAP-IS-----------------------PNFSRDLRSLISQLFKVSPRDRP-SITSILKR 254 (257)
T ss_pred ccCCC-CC-----------------------CCCCHHHHHHHHHHhccChhhCc-CHHHHhhC
Confidence 11100 00 01134578999999999999999 99999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=308.61 Aligned_cols=282 Identities=21% Similarity=0.324 Sum_probs=199.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC---C
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH---G 777 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~ 777 (1019)
.++|++.+.||+|+||.||+|++..+++.||||.+.... ......+.+|++++++++||||+++++++...... .
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 458999999999999999999999899999999986432 22234567899999999999999999998765321 1
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
....++||||++ +++.+++.... ..+++.+++.++.|++.||+|||++ +++|+||||+||+++.++.+||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEEC
Confidence 245799999995 58888876543 2389999999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc-ccHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDG-LTIHEF 935 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~-~~~~~~ 935 (1019)
|||.+......... .........++..|+|||.+.+. .++.++||||+|+++|||++|.+||....... ......
T Consensus 162 dfg~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~ 238 (310)
T cd07865 162 DFGLARAFSLSKNS---KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQ 238 (310)
T ss_pred cCCCcccccCCccc---CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999865332211 11122234678899999987664 47889999999999999999999997532210 001111
Q ss_pred HHHhCCcchhhccCh-hhhhhhhccCCCCCCCCCCccHH------HHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 936 AMKALPQRVIEIVDP-LLLLEVRTNNSKNPCGDGRGGIE------ECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~-~l~~~~~~~~~~~p~~~~~~~~~------~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.....+.......+. ...... ..|.. ...... .....+.+++.+||+.||++|| |++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~-t~~e~l~ 306 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKM-----ELPQG-QKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRI-DADTALN 306 (310)
T ss_pred HhCCCChhhcccccchhhhhhc-----cCCCc-cchhhHHhcccccCCHHHHHHHHHHhcCChhhcc-CHHHHhc
Confidence 111111111110000 000000 00000 000000 0123467899999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=313.07 Aligned_cols=283 Identities=22% Similarity=0.240 Sum_probs=200.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-Ccc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-GVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 779 (1019)
..+|.+.+.||+|+||.||+|++..+|+.||+|+++.. .......+.+|++++++++||||+++++++...... ...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999999888999999998643 222345678999999999999999999998754321 124
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++|+||++ .++..+... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEecccc-cCHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 5689999995 477766521 288999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .........
T Consensus 162 g~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--~~~~~~~~~ 229 (342)
T cd07879 162 GLARHADA----------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILK 229 (342)
T ss_pred CCCcCCCC----------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 99875311 1123467889999999876 4689999999999999999999999975321 111111111
Q ss_pred hCC---cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH--HHHHHH
Q 001738 939 ALP---QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK--LCAARE 1010 (1019)
Q Consensus 939 ~~~---~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~--L~~i~~ 1010 (1019)
..+ ..+.+.........+.......+..............+.+++.+||+.||++|| +++|+++. ++..++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL-TATEALEHPYFDSFRD 305 (342)
T ss_pred hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc-CHHHHhcCcchhhccc
Confidence 111 011111111000000000000000000000011234578999999999999999 99999864 555543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=315.79 Aligned_cols=282 Identities=22% Similarity=0.293 Sum_probs=199.5
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC-----
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG----- 777 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----- 777 (1019)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999999899999999997666566677889999999999999999998776543211
Q ss_pred ----cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CC
Q 001738 778 ----VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DM 852 (1019)
Q Consensus 778 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~ 852 (1019)
....++||||++ ++|.+++.... +++..++.++.||+.||+|||+. ||+||||||+||+++. ++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-------l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQGP-------LSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 135789999996 59988886532 88999999999999999999999 9999999999999974 56
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCccc
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLT 931 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~ 931 (1019)
.+|++|||.++....... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 153 ~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~ 227 (342)
T cd07854 153 VLKIGDFGLARIVDPHYS----HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-Q 227 (342)
T ss_pred eEEECCcccceecCCccc----cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 789999999976532111 0111122357889999997654 568889999999999999999999997532211 1
Q ss_pred HHHHHHHhCCcchhhccChhh---hhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 932 IHEFAMKALPQRVIEIVDPLL---LLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 932 ~~~~~~~~~~~~~~~~~d~~l---~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. ......+....+...... ...... ....+.............++.+++.+||+.||++|| |++|+++
T Consensus 228 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-t~~ell~ 299 (342)
T cd07854 228 MQ-LILESVPVVREEDRNELLNVIPSFVRN-DGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRL-TAEEALM 299 (342)
T ss_pred HH-HHHHhcCCCChHHhhhhhhhhhhhhhh-cccccCCCHHHHccCCCHHHHHHHHHHhCCCchhcc-CHHHHhC
Confidence 11 111111100000000000 000000 000000000000011245678999999999999999 9999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=305.86 Aligned_cols=247 Identities=26% Similarity=0.318 Sum_probs=194.7
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.|+..+.||+|+||.||+|++..++..||+|++.... ......+.+|++++++++|||++++++++... ...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE-----HTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----CeE
Confidence 4778889999999999999998889999999986432 23345788999999999999999999998876 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++ |++.+.+.... .++++.++..++.|++.|+.|||++ +|+||||+|+||+++.++.+||+|||+
T Consensus 101 ~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred EEEEeCCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 99999996 58877775433 2389999999999999999999999 999999999999999999999999998
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
+..... .....|++.|+|||++. ++.++.++|||||||++|||++|+.||...... ........
T Consensus 172 ~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~- 238 (317)
T cd06635 172 ASIASP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ- 238 (317)
T ss_pred ccccCC-----------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHh-
Confidence 864321 12346788999999873 456899999999999999999999998652111 00000000
Q ss_pred hCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 939 ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 939 ~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
... + ..........+.+++.+||+.+|.+|| ++.|+++..
T Consensus 239 ---~~~-------------------~----~~~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~il~~~ 278 (317)
T cd06635 239 ---NES-------------------P----TLQSNEWSDYFRNFVDSCLQKIPQDRP-TSEELLKHM 278 (317)
T ss_pred ---ccC-------------------C----CCCCccccHHHHHHHHHHccCCcccCc-CHHHHHhCh
Confidence 000 0 000012244578999999999999999 999999854
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=305.25 Aligned_cols=277 Identities=23% Similarity=0.285 Sum_probs=196.6
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
++|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-----KRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-----CeE
Confidence 578999999999999999999988999999999864422 2345688999999999999999999999866 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCCeEEeeec
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDFG 860 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg 860 (1019)
++||||++ +++.+++..... ..+++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999995 588888765432 2367888899999999999999999 9999999999999985 5679999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
++...... ........+++.|+|||++.+ ..++.++||||+||++|+|++|++||......+ ...+ ....
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~-~~~~ 219 (294)
T PLN00009 149 LARAFGIP-------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFK-IFRI 219 (294)
T ss_pred cccccCCC-------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHH
Confidence 99754211 111123456889999998765 457899999999999999999999997532211 1111 1111
Q ss_pred CCcchhhccChhh-hhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLL-LLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.........+... ..++.......+.............++.+++.+|++.+|++|| +++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp-s~~~~l~ 283 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI-TARAALE 283 (294)
T ss_pred hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc-CHHHHhc
Confidence 1111000000000 0000000000000000000011234578999999999999999 9999986
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=296.14 Aligned_cols=250 Identities=27% Similarity=0.366 Sum_probs=202.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
+|+..+.||+|++|.||+|.+..+++.|++|++........+.+.+|++++++++||+++++++++... ...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEEEE
Confidence 478889999999999999999888999999999866555567899999999999999999999998776 668999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
+||+++++|.+++.... ..+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 99999999999987753 2389999999999999999999998 999999999999999999999999999876
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
...... .....++..|+|||...+..++.++||||||+++|+|++|+.||...... +..........
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 214 (253)
T cd05122 148 LSDTKA--------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFKIATNGP 214 (253)
T ss_pred cccccc--------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhcCC
Confidence 532210 23456889999999998888999999999999999999999998643111 11000000000
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.....+ ......+.+++.+||+.||++|| |+.|+++
T Consensus 215 ~~~~~~----------------------~~~~~~~~~~i~~~l~~~p~~R~-t~~~~l~ 250 (253)
T cd05122 215 PGLRNP----------------------EKWSDEFKDFLKKCLQKNPEKRP-TAEQLLK 250 (253)
T ss_pred CCcCcc----------------------cccCHHHHHHHHHHccCChhhCC-CHHHHhc
Confidence 000000 01134578999999999999999 9999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=311.22 Aligned_cols=276 Identities=23% Similarity=0.240 Sum_probs=201.1
Q ss_pred HHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCC
Q 001738 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 700 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 777 (1019)
...+++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++|||++++++++....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--- 82 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL--- 82 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC---
Confidence 34678999999999999999999999989999999988542 2233467889999999999999999999886532
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
...++|+||+ +++|.++++... +++..+..++.|++.||+|||+. +|+||||+|+||+++.++.+||+
T Consensus 83 -~~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 83 -EDIYFVTELL-GTDLHRLLTSRP-------LEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred -CcEEEEeehh-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeC
Confidence 4678999998 669998887543 78888899999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 936 (1019)
|||.+..... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... .......
T Consensus 151 dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~--~~~~~~~ 218 (328)
T cd07856 151 DFGLARIQDP----------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH--VNQFSII 218 (328)
T ss_pred ccccccccCC----------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 9999874311 1123467889999998765 5689999999999999999999999975321 1111111
Q ss_pred HHh---CCcchhh-ccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 937 MKA---LPQRVIE-IVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 937 ~~~---~~~~~~~-~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
... .++++.+ ..+......... ...................+.+++.+|++.+|++|| ++++++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~-t~~ell~~ 288 (328)
T cd07856 219 TDLLGTPPDDVINTICSENTLRFVQS-LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRI-SAAEALAH 288 (328)
T ss_pred HHHhCCCCHHHHHhccchhhHHHHhh-ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCC-CHHHHhcC
Confidence 111 1111111 111100000000 000000000000011245688999999999999999 99999765
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=296.69 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=203.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|+..+.||+|++|.||+|.+..+++.|++|++..... ...+.+.+|++++++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 47888999999999999999988899999999975542 45678899999999999999999999887653 15689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 9999999999999998754 389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC-
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP- 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~- 941 (1019)
......... .......++..|+|||...+..++.++||||||+++|+|++|..||..... ..........
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~ 219 (260)
T cd06606 149 KRLGDIETG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGSS 219 (260)
T ss_pred Eeccccccc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhcccc
Confidence 876332210 012335688999999999888899999999999999999999999976431 1111111100
Q ss_pred cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 ~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... .| ......+.+++.+|++.+|.+|| ++.|+++
T Consensus 220 ~~~~~----------------~~--------~~~~~~l~~~i~~~l~~~p~~Rp-~~~~ll~ 256 (260)
T cd06606 220 GEPPE----------------IP--------EHLSEEAKDFLRKCLRRDPKKRP-TADELLQ 256 (260)
T ss_pred CCCcC----------------CC--------cccCHHHHHHHHHhCcCChhhCC-CHHHHhh
Confidence 00000 00 11145688999999999999999 9999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=301.61 Aligned_cols=247 Identities=24% Similarity=0.311 Sum_probs=192.4
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||+|+||+||+|.+..+|+.||+|++.... ......+.+|++++++++|||++++++++... +..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK-----DDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC-----CeEEEEEecC
Confidence 689999999999998899999999986432 22345567899999999999999999998765 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999976542 2389999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
.......++..|+|||+..+..++.++||||+||++|+|++|+.||....... .. +............
T Consensus 149 --------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~-~~~~~~~~~~~~~-- 216 (277)
T cd05577 149 --------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EK-EELKRRTLEMAVE-- 216 (277)
T ss_pred --------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cH-HHHHhcccccccc--
Confidence 11123457889999999988889999999999999999999999996532211 11 1111100000000
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHH-HHHHH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN-VVAKL 1005 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~e-vl~~L 1005 (1019)
. | ......+.+++.+||+.||.+|| ++.| .++.+
T Consensus 217 ---~-----------~--------~~~~~~~~~li~~~l~~~p~~R~-~~~~~~~~~l 251 (277)
T cd05577 217 ---Y-----------P--------DKFSPEAKDLCEALLQKDPEKRL-GCRGGSADEV 251 (277)
T ss_pred ---C-----------C--------ccCCHHHHHHHHHHccCChhHcc-CCCcccHHHH
Confidence 0 0 01134578999999999999999 7666 44444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=297.58 Aligned_cols=243 Identities=25% Similarity=0.285 Sum_probs=193.4
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||.|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. ...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK-----KYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC-----CccEEEEecC
Confidence 699999999999998889999999987432 23456789999999999999999999998766 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... +++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~------l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDRGL------FDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99999999976543 89999999999999999999999 9999999999999999999999999999765321
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
. ......|+..|+|||.+.+..++.++|+||+|+++|+|++|..||.....+. .+.........
T Consensus 147 ~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~----- 210 (262)
T cd05572 147 Q--------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGN----- 210 (262)
T ss_pred c--------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhccC-----
Confidence 1 1223467899999999988889999999999999999999999997643211 11111110000
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHh-----HHHHHH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLE-----MRNVVA 1003 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s-----~~evl~ 1003 (1019)
. .+.. + ......+.+++.+||+.+|++|| + ++|+++
T Consensus 211 ---~----------~~~~--~---~~~~~~~~~~i~~~l~~~p~~R~-~~~~~~~~~l~~ 251 (262)
T cd05572 211 ---G----------KLEF--P---NYIDKAAKDLIKQLLRRNPEERL-GNLKGGIKDIKK 251 (262)
T ss_pred ---C----------CCCC--C---cccCHHHHHHHHHHccCChhhCc-CCcccCHHHHhc
Confidence 0 0000 0 01144679999999999999999 7 566554
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=312.29 Aligned_cols=288 Identities=22% Similarity=0.234 Sum_probs=208.8
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...........|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5889999999999999999998889999999987543 34456789999999999999999999998776433345789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999997 58999887654 389999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~ 941 (1019)
......... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... ...........
T Consensus 151 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~ 224 (330)
T cd07834 151 RGVDPDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLG 224 (330)
T ss_pred Eeecccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcC
Confidence 875332210 1122334678999999999887 7899999999999999999999999764321 11111111111
Q ss_pred c---chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH--HHHHH
Q 001738 942 Q---RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK--LCAAR 1009 (1019)
Q Consensus 942 ~---~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~--L~~i~ 1009 (1019)
. ......+......+-......+.........+....+.+++.+||+.+|.+|| +++++++. ++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-t~~~ll~~~~~~~~~ 296 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRI-TADEALAHPYLAQLH 296 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCC-CHHHHHhCccHHhhc
Confidence 0 00000010000000000000000000000011345678999999999999999 99999874 45444
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=294.84 Aligned_cols=248 Identities=26% Similarity=0.417 Sum_probs=201.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-----DSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-----CEEE
Confidence 58889999999999999999988899999999976543 4557889999999999999999999998765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++.... .+++..+..++.|++.|++|||+. ||+||||+|+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 9999999999999997653 289999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ..........
T Consensus 147 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~ 214 (254)
T cd06627 147 TKLNDVS-------KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAALFRIVQD 214 (254)
T ss_pred eecCCCc-------ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHhcc
Confidence 8653322 112234678999999998888889999999999999999999999864321 1111110000
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... .+. ......+.+++.+|++.+|++|| |+.|++.
T Consensus 215 ~~~-~~~-----------------------~~~~~~~~~~i~~~l~~~p~~R~-~~~~~l~ 250 (254)
T cd06627 215 DHP-PLP-----------------------EGISPELKDFLMQCFQKDPNLRP-TAKQLLK 250 (254)
T ss_pred CCC-CCC-----------------------CCCCHHHHHHHHHHHhCChhhCc-CHHHHhc
Confidence 000 000 01134578999999999999999 9999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=311.04 Aligned_cols=278 Identities=20% Similarity=0.223 Sum_probs=201.5
Q ss_pred HHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-
Q 001738 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH- 776 (1019)
Q Consensus 700 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 776 (1019)
....++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 34567899999999999999999999889999999998643 222345678999999999999999999988765322
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEE
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 856 (1019)
.....++||||+ +++|.+++.... +++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~~-------l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHEK-------LSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 123568999999 789998886532 89999999999999999999999 9999999999999999999999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
+|||++..... ......+++.|+|||.+.+ ..++.++||||+||++|++++|+.||...... ......
T Consensus 160 ~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~ 228 (343)
T cd07880 160 LDFGLARQTDS----------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEI 228 (343)
T ss_pred eeccccccccc----------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99999875421 1123467889999998876 45889999999999999999999999753211 011111
Q ss_pred HHH--hCCcchhhccChhhhhhhhccCCCCCCCCCC---ccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 936 AMK--ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGR---GGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 936 ~~~--~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
... ..+..+.+.+...-...+. ...|..... .........+.+++.+|++.||++|| |+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~-t~~~~l~ 297 (343)
T cd07880 229 MKVTGTPSKEFVQKLQSEDAKNYV---KKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI-TAAEALA 297 (343)
T ss_pred HHhcCCCCHHHHHhhcchhHHHHH---HhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC-CHHHHhc
Confidence 000 0011111111110000000 000000000 00012244578999999999999999 9999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=297.92 Aligned_cols=244 Identities=23% Similarity=0.286 Sum_probs=188.6
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccc---hhhHHHHHHHHHH-hcCCCCCcceEEEEEecCCCCCcceEEEEE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAECEAL-RNIRHRNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.||+|+||.||+|.+..+++.||+|+++.... .....+..|..++ ...+|+|++++++++... +..|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK-----DYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC-----CeEEEEE
Confidence 579999999999999988899999999865432 2223344555444 445899999999999765 6789999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+++++|.+++..... +++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 77 e~~~~~~L~~~l~~~~~------~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTLGG------LPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999999976543 88999999999999999999999 9999999999999999999999999998753
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchh
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 945 (1019)
.. .....|+..|+|||...+..++.++||||+|+++|||++|..||..... ....+......
T Consensus 148 ~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~----- 209 (260)
T cd05611 148 LE-----------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--DAVFDNILSRR----- 209 (260)
T ss_pred cc-----------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcc-----
Confidence 21 1234578899999999888899999999999999999999999965321 11111100000
Q ss_pred hccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 946 EIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 946 ~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
.. .+. .....+...+.+++.+||+.+|++|| ++.++.+.+
T Consensus 210 --~~-------------~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~-~~~~~~~~l 249 (260)
T cd05611 210 --IN-------------WPE----EVKEFCSPEAVDLINRLLCMDPAKRL-GANGYQEIK 249 (260)
T ss_pred --cC-------------CCC----cccccCCHHHHHHHHHHccCCHHHcc-CCCcHHHHH
Confidence 00 000 00012345679999999999999999 987665544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=304.15 Aligned_cols=258 Identities=22% Similarity=0.284 Sum_probs=193.6
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|+..+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. ||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-----~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-----GDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC-----CcEE
Confidence 5666789999999999999999899999999987543 234567889999999996 99999999988765 5678
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
++|||++ +++.++....... ....+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEeccc-CCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchh
Confidence 9999985 4665543321100 0123899999999999999999999632 8999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS---EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
....... ......|+..|+|||++.+. .++.++||||+||++|||++|+.||.... ...+.....
T Consensus 156 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~ 223 (288)
T cd06616 156 GQLVDSI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQV 223 (288)
T ss_pred HHhccCC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhh
Confidence 7542211 11233578899999998776 68999999999999999999999996432 111111111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.... .+.+. ......+..++.+++.+||+.+|++|| |++||++.
T Consensus 224 ~~~~-----~~~~~---------------~~~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~i~~~ 267 (288)
T cd06616 224 VKGD-----PPILS---------------NSEEREFSPSFVNFINLCLIKDESKRP-KYKELLEH 267 (288)
T ss_pred cCCC-----CCcCC---------------CcCCCccCHHHHHHHHHHccCChhhCc-CHHHHhcC
Confidence 1100 00000 000012355689999999999999999 99999874
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=301.39 Aligned_cols=273 Identities=19% Similarity=0.210 Sum_probs=195.3
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|++.+.||+|+||.||+|.+..+++.||+|+++... ........+|+.+++++. |+|++++++++.+... +..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~---~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKT---GRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCC---CcEEE
Confidence 678889999999999999998899999999987532 222234457888898885 9999999999876532 46799
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||++ +++.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++. +.+||+|||.++
T Consensus 78 v~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999996 58888887543 1389999999999999999999999 9999999999999999 999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ......++..|+|||+..+ ..++.++||||+||++|||++|..||..... .............
T Consensus 148 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~ 217 (282)
T cd07831 148 GIYSKP--------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGT 217 (282)
T ss_pred ccccCC--------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCC
Confidence 653211 1122457899999997644 5578999999999999999999999975322 1111222221111
Q ss_pred chhhccChhhhhhhhccCCCCCCCC---CCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGD---GRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~---~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...++ ........ ......|... ...........+.+++.+||+++|++|| +++|+++.
T Consensus 218 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~-~~~~~l~~ 279 (282)
T cd07831 218 PDAEV-LKKFRKSR-HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERI-TAKQALRH 279 (282)
T ss_pred CCHHH-HHhhcccc-cccccCcccccccHHHHcccccHHHHHHHHHHhccCccccc-CHHHHhhC
Confidence 11100 00000000 0000000000 0000113357789999999999999999 99999763
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=294.63 Aligned_cols=252 Identities=24% Similarity=0.403 Sum_probs=203.4
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++|||++++.+.+... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 58888999999999999999988899999999975533 4557788999999999999999999998776 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||+++++|.+++..... ....+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 99999999999999987532 123489999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ..+........
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~ 218 (258)
T cd08215 151 KVLSSTV-------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKG 218 (258)
T ss_pred eecccCc-------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcC
Confidence 7653221 11223468899999999988889999999999999999999999986432 11111111110
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.... + | ......+.+++.+||..+|++|| |+.|+++
T Consensus 219 ~~~~-----~-----------~--------~~~~~~~~~~i~~~l~~~p~~Rp-~~~~ll~ 254 (258)
T cd08215 219 QYPP-----I-----------P--------SQYSSELRNLVSSLLQKDPEERP-SIAQILQ 254 (258)
T ss_pred CCCC-----C-----------C--------CCCCHHHHHHHHHHcCCChhhCc-CHHHHhc
Confidence 0000 0 0 01245578999999999999999 9999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=299.96 Aligned_cols=272 Identities=21% Similarity=0.268 Sum_probs=201.5
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|++.+.||+|++|.||+|.+..+++.+|+|+++.... .....+.+|++++++++|+||+++++++... ...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 6778899999999999999988999999999875432 2456788999999999999999999998766 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
|+||+++ ++.+++.... ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999965 8888887643 2389999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||..... .............
T Consensus 147 ~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~ 217 (283)
T cd05118 147 SFGSPV-------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLGT 217 (283)
T ss_pred ecCCCc-------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCC
Confidence 653221 111234578899999998776 789999999999999999999999965322 1111111111111
Q ss_pred c----hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 R----VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. +....+..-.... ...............+...++.+++.+||+.||.+|| ++++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp-~~~~ll~ 279 (283)
T cd05118 218 PDPEVWPKFTSLARNYKF--SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI-TAEQALA 279 (283)
T ss_pred CchHhcccchhhhhhhhh--hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCc-CHHHHhh
Confidence 1 1111110000000 0000000000111224567889999999999999999 9999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=283.22 Aligned_cols=210 Identities=25% Similarity=0.349 Sum_probs=175.6
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCC----EEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGG----LLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 776 (1019)
...|+....||+|.||.||+|..+.+. +.+|+|.++.+.+ +......+|+..++.++|||++.+..++-..+
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d-- 100 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD-- 100 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC--
Confidence 347999999999999999999665332 3799999975533 23456789999999999999999999887753
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC----C
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD----M 852 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~ 852 (1019)
..+++++||.|. +|.+.++.++.... ..++...+..|+.||+.|+.|||++ =|+|||+||.|||+..+ |
T Consensus 101 --~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 101 --KKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred --ceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccC
Confidence 678999999976 99999987765443 4689999999999999999999999 79999999999999877 8
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
.|||+|||+|+.+...-. +-.....++-|..|+|||.+.|. .||++.||||.|||+.||++-.+-|.+.
T Consensus 174 ~VKIaDlGlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred eeEeecccHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 999999999998744321 22233456789999999998875 6999999999999999999999998764
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=300.36 Aligned_cols=274 Identities=23% Similarity=0.310 Sum_probs=199.9
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++|||++++++++...+ ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 678899999999999999999889999999998653 334467889999999999999999999987652 256899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||++ ++|.+++.... ..+++..++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+.
T Consensus 78 v~e~~~-~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eecccc-ccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 999997 48998887652 2389999999999999999999999 99999999999999999999999999998
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... .............
T Consensus 149 ~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~--~~~~~~~~~~~~~ 220 (287)
T cd07840 149 PYTKRNS------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE--LEQLEKIFELCGS 220 (287)
T ss_pred eccCCCc------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCC
Confidence 6533221 11223456888999997765 4578999999999999999999999975322 1111111111111
Q ss_pred c----hhhccChhhhhhhhccCCCCCCCCC-CccHHH-HHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 R----VIEIVDPLLLLEVRTNNSKNPCGDG-RGGIEE-CLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~----~~~~~d~~l~~~~~~~~~~~p~~~~-~~~~~~-~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. +....+-....... ...+.... ...... +...+.+++.+||+.+|.+|| +++++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp-~~~~~l~ 283 (287)
T cd07840 221 PTDENWPGVSKLPWFENLK---PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRI-SADQALQ 283 (287)
T ss_pred Cchhhccccccchhhhhcc---ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCc-CHHHHhh
Confidence 0 00000000000000 00000000 000011 256789999999999999999 9999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=298.74 Aligned_cols=276 Identities=20% Similarity=0.256 Sum_probs=199.4
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcC---CCCCcceEEEEEecCCCCCcce
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNI---RHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
|++.+.||+|+||.||+|+++.+++.||+|+++.... .....+.+|+.+++++ +|||++++++++...+..+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778899999999999999988899999999974322 2234566788777666 5999999999998774433345
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.+++|||+. ++|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999996 589998876442 2389999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
.+....... ......++..|+|||++.+..++.++|||||||++|||++|.+||..... ............
T Consensus 153 ~~~~~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (287)
T cd07838 153 LARIYSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIG 223 (287)
T ss_pred cceeccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcC
Confidence 997653211 11233578899999999988999999999999999999999999875321 111111111111
Q ss_pred CcchhhccChh--hhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 941 PQRVIEIVDPL--LLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 941 ~~~~~~~~d~~--l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
........... ....+ ...+.........+....+.+++.+||+.||.+|| +++|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-~~~~il~ 283 (287)
T cd07838 224 LPSEEEWPRNVSLPRSSF----PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRI-SAFEALQ 283 (287)
T ss_pred CCChHhcCCCcccchhhc----ccccccchhhhhhhhhHHHHHHHHHHhccCCccCC-CHHHHhc
Confidence 00000000000 00000 00000001111123346678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=296.91 Aligned_cols=250 Identities=23% Similarity=0.278 Sum_probs=201.7
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|++.+.||+|+||.||++++..+++.+|+|.+.... ......+.+|++++++++|+||+++.+++... ...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 5888999999999999999998899999999987542 33456778899999999999999999988765 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+++++|.+++...... ...+++..++.++.|++.|++|||+. |++||||+|+||+++.++.+|++|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 999999999999998763321 23489999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ......+++.|+|||...+..++.++|+||+|+++|||++|+.||..... ........ ..
T Consensus 151 ~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~---~~ 216 (256)
T cd08530 151 KVLKKN---------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--QDLRYKVQ---RG 216 (256)
T ss_pred hhhccC---------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh---cC
Confidence 765322 11224578899999999998899999999999999999999999965321 11111100 00
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.. | .........+.+++.+|++.+|++|| ++.|+++
T Consensus 217 ~~-------------------~-----~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~l~ 252 (256)
T cd08530 217 KY-------------------P-----PIPPIYSQDLQNFIRSMLQVKPKLRP-NCDKILA 252 (256)
T ss_pred CC-------------------C-----CCchhhCHHHHHHHHHHcCCCcccCC-CHHHHhc
Confidence 00 0 00112345689999999999999999 9999975
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=307.51 Aligned_cols=281 Identities=19% Similarity=0.238 Sum_probs=197.2
Q ss_pred CCCCC-CCceeccccEEEEEEEeCCCCEEEEEEEeecccchh--------------hHHHHHHHHHHhcCCCCCcceEEE
Q 001738 704 GEFST-SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--------------FKSFVAECEALRNIRHRNLIKIIT 768 (1019)
Q Consensus 704 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~ 768 (1019)
++|.. .+.||+|+||+||+|.+..+++.||||+++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 46664 577999999999999998899999999986432211 124678999999999999999999
Q ss_pred EEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 769 ~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
++... ++.++||||++ ++|.+++..... +++..+..++.|++.||+|||+. +++||||+|+||++
T Consensus 88 ~~~~~-----~~~~lv~e~~~-~~l~~~l~~~~~------~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 88 VYVEG-----DFINLVMDIMA-SDLKKVVDRKIR------LTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred EEecC-----CcEEEEEeccc-cCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 98766 67899999996 699999876432 89999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeeeccceeccccCCCCC-------CCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCC
Q 001738 849 DHDMVAHVGDFGLAKFLYTCQVDDV-------ETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKR 920 (1019)
Q Consensus 849 ~~~~~~kL~Dfg~a~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~ 920 (1019)
+.++.+||+|||.+........... ..........++..|+|||.+.+. .++.++||||+||++|||++|++
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999976532111000 011112234568899999998764 46899999999999999999999
Q ss_pred CCCCCCCCcccHHHHHHHhCCcchhhccChhhh-hhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHH
Q 001738 921 PTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLL-LEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999 (1019)
Q Consensus 921 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~ 999 (1019)
||...... ....................... ..+.......|.. .......+...+.+++.+|++.+|++|| |++
T Consensus 233 p~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~-s~~ 308 (335)
T PTZ00024 233 LFPGENEI--DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKD-LKTIFPNASDDAIDLLQSLLKLNPLERI-SAK 308 (335)
T ss_pred CCCCCCHH--HHHHHHHHHhCCCchhhCcchhhcccccccCcCCccc-HHHhCcCCChHHHHHHHHHcCCCchhcc-CHH
Confidence 99753221 11111111111110000000000 0000000000000 0000011245678999999999999999 999
Q ss_pred HHHH
Q 001738 1000 NVVA 1003 (1019)
Q Consensus 1000 evl~ 1003 (1019)
|++.
T Consensus 309 ~~l~ 312 (335)
T PTZ00024 309 EALK 312 (335)
T ss_pred HHhc
Confidence 9986
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=307.35 Aligned_cols=288 Identities=19% Similarity=0.247 Sum_probs=199.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC---C
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSH---G 777 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~ 777 (1019)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++...... .
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4789999999999999999999998999999999864322 2234567899999999999999999887654321 1
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
....++||||+++ ++...+.... ..+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 2467999999964 7777766432 2389999999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCC----CCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 001738 858 DFGLAKFLYTCQVDDVE----TPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~ 932 (1019)
|||++............ .........+++.|+|||.+.+. .++.++||||+||++|||++|++||.+.... ..
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~--~~ 235 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI--DQ 235 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH--HH
Confidence 99999765332211110 11122345678899999987654 5899999999999999999999999653221 11
Q ss_pred HHHHHHhCCcc-hhhccChhhhhhhh--ccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 933 HEFAMKALPQR-VIEIVDPLLLLEVR--TNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 933 ~~~~~~~~~~~-~~~~~d~~l~~~~~--~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+......... .....+........ ......|.. ...........+.+++.+|++.||++|| |+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~-t~~ell~ 307 (311)
T cd07866 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT-LEERFGKLGPEGLDLLSKLLSLDPYKRL-TASDALE 307 (311)
T ss_pred HHHHHHHhCCCChhhchhhhhcccccccccCCCCCcc-HHHHcccCChhHHHHHHHHcccCcccCc-CHHHHhc
Confidence 11111111000 00000000000000 000000000 0000111235678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=296.52 Aligned_cols=243 Identities=21% Similarity=0.235 Sum_probs=183.3
Q ss_pred ceeccccEEEEEEEeCCCCEEEEEEEeecccc---hhhHHHHHHH---HHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAEC---EALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.||+|+||.||+|++..+++.||+|.+..... .....+..|. +.++...||+|+++++++... +..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-----DKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CEEEEE
Confidence 48999999999999988899999999864321 1112233343 344445799999999988876 678999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
|||++|++|.+++.... .+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 ~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999987543 289999999999999999999999 999999999999999999999999999875
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcc
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 943 (1019)
.... ......|+..|+|||.+.++ .++.++||||+||++|||++|+.||.................
T Consensus 147 ~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---- 213 (278)
T cd05606 147 FSKK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---- 213 (278)
T ss_pred cCcc---------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc----
Confidence 4211 11234689999999998754 689999999999999999999999975322111100000000
Q ss_pred hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhH----hHHHHHH
Q 001738 944 VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTL----EMRNVVA 1003 (1019)
Q Consensus 944 ~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~----s~~evl~ 1003 (1019)
.++.+ | ......+.+++.+|+..+|.+||. +++|+++
T Consensus 214 ----~~~~~-----------~--------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 214 ----MAVEL-----------P--------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ----cCCCC-----------C--------CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 00000 0 011345789999999999999993 5666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=303.12 Aligned_cols=282 Identities=22% Similarity=0.287 Sum_probs=201.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC----
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDS---- 775 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 775 (1019)
..++|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|++++++++|||++++++++.+..+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578999999999999999999999889999999997542 2234567789999999999999999999876531
Q ss_pred -CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 776 -HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 776 -~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
......++|+||+++ ++.+.+.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~ 155 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQI 155 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcE
Confidence 011378999999976 7777776542 2389999999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~ 933 (1019)
||+|||.+........ .......++..|+|||.+.+. .++.++||||+||++|||++|++||.... .....
T Consensus 156 kl~dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~--~~~~~ 227 (302)
T cd07864 156 KLADFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ--ELAQL 227 (302)
T ss_pred EeCcccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hHHHH
Confidence 9999999976532210 111223467889999987653 57899999999999999999999996421 11111
Q ss_pred HHHHHhCCcc----hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 934 EFAMKALPQR----VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 934 ~~~~~~~~~~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
+......... +.++.........+ ...................+.+++.+||+.||.+|| +++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp-~~~~il~ 298 (302)
T cd07864 228 ELISRLCGSPCPAVWPDVIKLPYFNTMK--PKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRC-TAEEALN 298 (302)
T ss_pred HHHHHHhCCCChhhcccccccccccccc--cccccccchhhhcCCCCHHHHHHHHHHccCChhhCC-CHHHHhc
Confidence 1122211111 11111000000000 000000000011112345689999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=321.72 Aligned_cols=281 Identities=20% Similarity=0.165 Sum_probs=189.0
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCC-EEEEEEE--------------ee---cccchhhHHHHHHHHHHhcCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGG-LLVAVKV--------------LN---LTRKGAFKSFVAECEALRNIRHRNL 763 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~--------------~~---~~~~~~~~~~~~E~~~l~~l~h~ni 763 (1019)
..++|++.+.||+|+||+||++..+... ..+++|. +. .........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999998764322 2222221 10 0112234567899999999999999
Q ss_pred ceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCC
Q 001738 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843 (1019)
Q Consensus 764 v~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 843 (1019)
+++++++... +..|+|+|++ ++++.+++....... .......++..++.||+.||+|||++ +||||||||
T Consensus 226 v~l~~~~~~~-----~~~~lv~e~~-~~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILRSE-----ANTYMITQKY-DFDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEEEC-----CeeEEEEecc-ccCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 9999999876 6689999998 457888776543211 11234667788999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCC-C
Q 001738 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-T 922 (1019)
Q Consensus 844 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~P-f 922 (1019)
+|||++.++.+||+|||+++.+.... ........||+.|+|||++.+..++.++|||||||++|||++|..+ +
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKER------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCccc------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999999998653211 1122345799999999999999999999999999999999998764 4
Q ss_pred CCCCCCc-ccHHHHHHH------hCCcchhhccChhhhhhhhccCCCCCCCCCCccHH--HHHHHHHHHHhhccCCCcCc
Q 001738 923 DSMFNDG-LTIHEFAMK------ALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIE--ECLVAVITIGVLCSMESPID 993 (1019)
Q Consensus 923 ~~~~~~~-~~~~~~~~~------~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~--~~~~~l~~l~~~Cl~~dP~~ 993 (1019)
....... ..+.+.... ..++...+..+......+. ..+.. ...... .....+.+++.+|++.||++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~----~~~~~-~~~~~~~~~~~~~~~~li~kmL~~DP~~ 444 (501)
T PHA03210 370 GDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEID----HAGHS-VPPLIRNLGLPADFEYPLVKMLTFDWHL 444 (501)
T ss_pred cCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcc----cCccc-hhhHHHhcCCChHHHHHHHHHhccCccc
Confidence 3322111 111111110 0111100010000000000 00000 000000 01234677899999999999
Q ss_pred hhHhHHHHHHH
Q 001738 994 RTLEMRNVVAK 1004 (1019)
Q Consensus 994 RP~s~~evl~~ 1004 (1019)
|| |++|+++.
T Consensus 445 Rp-sa~elL~h 454 (501)
T PHA03210 445 RP-GAAELLAL 454 (501)
T ss_pred Cc-CHHHHhhC
Confidence 99 99999874
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=293.47 Aligned_cols=264 Identities=23% Similarity=0.326 Sum_probs=205.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-------hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-------GAFKSFVAECEALRNIRHRNLIKIITICSSIDS 775 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 775 (1019)
.++|-+...||+|||++||+|.+....+.||||+-..... ...+...+|.+|.+.+.||.||++|+++.-..
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt- 540 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT- 540 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc-
Confidence 4578889999999999999999988899999999753321 12355689999999999999999999987643
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC---CC
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH---DM 852 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 852 (1019)
+.+|-|+|||+|-+|+-|++.++. +++.+++.|+.||+.||.||.+. .++|||-|+||.|||+.. -|
T Consensus 541 ---dsFCTVLEYceGNDLDFYLKQhkl------mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 541 ---DSFCTVLEYCEGNDLDFYLKQHKL------MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred ---ccceeeeeecCCCchhHHHHhhhh------hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 567999999999999999998875 89999999999999999999998 679999999999999954 47
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS----EASMAGDVYSFGILLLEMFIRKRPTDSMFND 928 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~ 928 (1019)
.+||+|||+++++..+.+.....-..+....||.+|.+||.+--+ ..+.|+||||.|||+|+.+.|+.||......
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ 690 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ 690 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence 899999999999977776655555666678899999999976533 4688999999999999999999999753222
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
...+.+. .++.. .....|.. +.+ ..+...++++|+++.-++|. .+.++.
T Consensus 691 QdILqeN----------TIlkA--------tEVqFP~K---PvV---sseAkaFIRRCLaYRKeDR~-DV~qLA 739 (775)
T KOG1151|consen 691 QDILQEN----------TILKA--------TEVQFPPK---PVV---SSEAKAFIRRCLAYRKEDRI-DVQQLA 739 (775)
T ss_pred HHHHhhh----------chhcc--------eeccCCCC---Ccc---CHHHHHHHHHHHHhhhhhhh-hHHHHc
Confidence 1111100 00000 00011111 111 22347889999999999999 666654
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=306.71 Aligned_cols=281 Identities=21% Similarity=0.228 Sum_probs=198.1
Q ss_pred CCCCCCceeccccEEEEEEEeCCC--CEEEEEEEeecc--cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEG--GLLVAVKVLNLT--RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+|++.+.||+|+||.||+|++..+ +..||+|++... .....+.+.+|+.+++++ +||||+++++++.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 478889999999999999999877 889999998643 222346778899999999 5999999998765432 1225
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++++||++ ++|.+++..... +++..++.++.||+.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~------~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQP------LTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 6789999985 699999875442 89999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|.++........ .........|+..|+|||+..+ ..++.++||||+||++|+|++|++||..... ....+....
T Consensus 150 g~a~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~--~~~~~~~~~ 224 (332)
T cd07857 150 GLARGFSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY--VDQLNQILQ 224 (332)
T ss_pred CCceeccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH--HHHHHHHHH
Confidence 999865332211 1112234578999999998765 4689999999999999999999999975321 111111111
Q ss_pred hCCcc----hhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 939 ALPQR----VIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 939 ~~~~~----~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... .....++....... .....+..............+.+++.+|++.||.+|| |++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~-t~~~ll~ 291 (332)
T cd07857 225 VLGTPDEETLSRIGSPKAQNYIR-SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRI-SVEEALE 291 (332)
T ss_pred HhCCCCHHHHHhhhhhhHHHHHH-hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCC-CHHHHhc
Confidence 11100 11111110000000 0000000000000001234678999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=299.32 Aligned_cols=245 Identities=25% Similarity=0.310 Sum_probs=192.6
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
|...+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++|||++++++++.+. ...|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-----HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEE
Confidence 666788999999999999998899999999987432 23345688899999999999999999999876 6789
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||+. +++.+++.... .++++.++..++.|++.|++|||++ |++||||+|+||+++.++.+||+|||.+
T Consensus 98 lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999995 57888776533 2389999999999999999999999 9999999999999999999999999988
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.... ......|+..|+|||++. +..++.++|||||||++|||++|..||..... .......
T Consensus 169 ~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~~ 232 (313)
T cd06633 169 SKSS-----------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHI 232 (313)
T ss_pred cccC-----------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHH
Confidence 6321 112346889999999974 45688999999999999999999999865311 1111110
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
........ ........+.+++.+||+.+|.+|| +++++++.
T Consensus 233 ~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~P~~Rp-~~~~~l~~ 273 (313)
T cd06633 233 AQNDSPTL-----------------------QSNEWTDSFRGFVDYCLQKIPQERP-ASAELLRH 273 (313)
T ss_pred HhcCCCCC-----------------------CccccCHHHHHHHHHHccCChhhCc-CHHHHhcC
Confidence 00000000 0011234578899999999999999 99999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=288.52 Aligned_cols=274 Identities=23% Similarity=0.287 Sum_probs=205.7
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC--CCC----cceEEEEEecCCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR--HRN----LIKIITICSSIDS 775 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~~~~~~~~~~~ 775 (1019)
..++|.+...+|+|.||.|-++.+..++..||||+++... ...+..+-|+++++++. .|+ +|++.++|...
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr-- 163 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR-- 163 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc--
Confidence 3689999999999999999999999899999999997443 23456678999999993 222 67777777665
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-----
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH----- 850 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 850 (1019)
++.|+|+|.+ |-|+.+++..+. ..+++..+++.+++|++++++|||+. +++|-|+||+||++..
T Consensus 164 ---ghiCivfell-G~S~~dFlk~N~----y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 164 ---GHICIVFELL-GLSTFDFLKENN----YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred ---CceEEEEecc-ChhHHHHhccCC----ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEE
Confidence 7899999988 779999999876 34599999999999999999999999 9999999999999932
Q ss_pred ---------------CCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHH
Q 001738 851 ---------------DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915 (1019)
Q Consensus 851 ---------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~el 915 (1019)
+..+|++|||.|.+... .....+.|..|+|||++.+-.++.++||||+|||++|+
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE----------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceecc----------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 23589999999986422 12456789999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCC-cccHHHHHHHhCCcchhhccChhhhhhh-hc--------------cCCCCCCCC---CCccHHHHH
Q 001738 916 FIRKRPTDSMFND-GLTIHEFAMKALPQRVIEIVDPLLLLEV-RT--------------NNSKNPCGD---GRGGIEECL 976 (1019)
Q Consensus 916 l~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~--------------~~~~~p~~~---~~~~~~~~~ 976 (1019)
.+|..-|+...+. ...+.+.+.+..|.. ++...-...+ .. ....++|.. ......+..
T Consensus 303 ytG~~LFqtHen~EHLaMMerIlGp~P~~---mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLAMMERILGPIPSR---MIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred eccceecccCCcHHHHHHHHHhhCCCcHH---HhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHH
Confidence 9999999875422 112222222222222 2221100000 00 011122221 111222456
Q ss_pred HHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 977 VAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 977 ~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+|.+++.+++.+||.+|+ |+.|++.
T Consensus 380 ~~LfDLl~~mL~fDP~~Ri-Tl~EAL~ 405 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRI-TLREALS 405 (415)
T ss_pred hHHHHHHHHHHccCccccc-cHHHHhc
Confidence 6799999999999999999 9999875
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=301.69 Aligned_cols=248 Identities=25% Similarity=0.315 Sum_probs=194.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..|+..+.||+|+||.||+|++..+++.||+|.+... .....+++.+|+++++.++|+|++++++++... ..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----Ce
Confidence 3477788999999999999999888999999998642 223345678899999999999999999998876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.++||||+. |++.+++..... ++++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 899999996 688887754331 378999999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCccccc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM---GSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
++..... .....|++.|+|||.+. ...++.++|||||||++|||++|+.||...... +...
T Consensus 161 ~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~ 224 (308)
T cd06634 161 SASIMAP-----------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALY 224 (308)
T ss_pred cceeecC-----------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-----HHHH
Confidence 9875421 12346788999999874 346788999999999999999999998642111 0000
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
....... |.. ........+.+++.+||+.+|++|| +++++++.-
T Consensus 225 ~~~~~~~-------------------~~~----~~~~~~~~~~~li~~cl~~~P~~Rp-~~~~ll~~~ 268 (308)
T cd06634 225 HIAQNES-------------------PAL----QSGHWSEYFRNFVDSCLQKIPQDRP-TSEVLLKHR 268 (308)
T ss_pred HHhhcCC-------------------CCc----CcccccHHHHHHHHHHhhCCcccCC-CHHHHhhCc
Confidence 0000000 000 0012245578999999999999999 999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=309.58 Aligned_cols=265 Identities=22% Similarity=0.274 Sum_probs=216.7
Q ss_pred HHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCC
Q 001738 696 YAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSID 774 (1019)
Q Consensus 696 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 774 (1019)
++.+...++.|++.+.||.|.+|.||+++.+++++.+|+|+.....+.. ++++.|.++++.. .|||++.++|+|...+
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d-eEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE-EEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc-HHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 3444456678999999999999999999999999999999998664443 7788899999988 5999999999998887
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCe
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVA 854 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 854 (1019)
....+..|+|||||.|||..++++.... ..+.|..+..|++.++.|+.|||.+ .++|||||-.||+++.++.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g----~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKG----NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcc----cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 7777999999999999999999998763 3499999999999999999999999 99999999999999999999
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCc
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-----EASMAGDVYSFGILLLEMFIRKRPTDSMFNDG 929 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~ 929 (1019)
|++|||.+..+.. +........||+.|||||++... .|+.++|+||+|++..||.-|.+|+-++..-.
T Consensus 163 KLvDFGvSaQlds-------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr 235 (953)
T KOG0587|consen 163 KLVDFGVSAQLDS-------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR 235 (953)
T ss_pred EEeeeeeeeeeec-------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence 9999999987643 33455567899999999997643 47889999999999999999999987643210
Q ss_pred ccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 930 LTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
......+... | .....+....++.+++..|+.+|-++|| ++.++++
T Consensus 236 -----aLF~IpRNPP-----P-----------------kLkrp~kWs~~FndFIs~cL~Kd~e~RP-~~~~ll~ 281 (953)
T KOG0587|consen 236 -----ALFLIPRNPP-----P-----------------KLKRPKKWSKKFNDFISTCLVKDYEQRP-STEELLK 281 (953)
T ss_pred -----hhccCCCCCC-----c-----------------cccchhhHHHHHHHHHHHHHhhccccCc-chhhhcc
Confidence 0000000000 1 1111234577899999999999999999 8888775
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=310.42 Aligned_cols=279 Identities=21% Similarity=0.251 Sum_probs=200.9
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCC-CC
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDS-HG 777 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 777 (1019)
...++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.++++++|||++++.+++..... ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3467899999999999999999999988999999998643 22334567789999999999999999987765432 22
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
....++|+||+ +++|.+++.... +++..+..++.|+++|++|||+. ||+||||||+||+++.++.+||+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQK-------LSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEc
Confidence 24589999999 679999987532 89999999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~ 936 (1019)
|||++..... ......++..|+|||...+ ..++.++||||+||++||+++|+.||..... .......
T Consensus 161 dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i 228 (343)
T cd07851 161 DFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRI 228 (343)
T ss_pred cccccccccc----------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHH
Confidence 9999975421 1223467889999998765 3678999999999999999999999975321 1111111
Q ss_pred HHhCC---cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 937 MKALP---QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 937 ~~~~~---~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..... +.+..-+.......+.......+...-.........++.+++.+|++.||++|| |++||++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp-t~~ell~ 297 (343)
T cd07851 229 MNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI-TAAEALA 297 (343)
T ss_pred HHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC-CHHHHhc
Confidence 11111 111000000000000000000000000000011245689999999999999999 9999976
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=298.87 Aligned_cols=255 Identities=27% Similarity=0.361 Sum_probs=201.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 779 (1019)
++|.+.+.||+|+||.||+|+...+++.||+|++... .....+.+.+|++++++++ ||||+++++++... +
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-----E 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----c
Confidence 4789999999999999999999989999999998653 2233467889999999998 99999999988665 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 7899999999999999998764 289999999999999999999999 9999999999999999999999999
Q ss_pred ccceeccccCCCCC-------------CCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 001738 860 GLAKFLYTCQVDDV-------------ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF 926 (1019)
Q Consensus 860 g~a~~~~~~~~~~~-------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~ 926 (1019)
|.+........... ..........++..|+|||+..+..++.++||||+|+++|++++|+.||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 99986543221100 00122234567899999999888889999999999999999999999997532
Q ss_pred CCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH----HHHH
Q 001738 927 NDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM----RNVV 1002 (1019)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~----~evl 1002 (1019)
. ......... .. ...| ......+.+++.+||+.+|.+|| ++ +|++
T Consensus 227 ~-----~~~~~~~~~------~~-----------~~~~--------~~~~~~~~~li~~~l~~~p~~R~-~~~~~~~~ll 275 (280)
T cd05581 227 E-----YLTFQKILK------LE-----------YSFP--------PNFPPDAKDLIEKLLVLDPQDRL-GVNEGYDELK 275 (280)
T ss_pred H-----HHHHHHHHh------cC-----------CCCC--------CccCHHHHHHHHHHhcCCHhhCC-CcccCHHHHh
Confidence 1 000000000 00 0000 01134578999999999999999 99 7765
Q ss_pred H
Q 001738 1003 A 1003 (1019)
Q Consensus 1003 ~ 1003 (1019)
+
T Consensus 276 ~ 276 (280)
T cd05581 276 A 276 (280)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=295.60 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=194.5
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeecccc---hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||+|+||.||+|++..+|+.||+|++..... ...+.+.+|++++++++|||++++++.+... ...|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK-----KNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC-----cEEEEEEecC
Confidence 6899999999999998899999999875433 3456788999999999999999999888765 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999998654 289999999999999999999999 9999999999999999999999999998754222
Q ss_pred CCCC-CCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhc
Q 001738 869 QVDD-VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEI 947 (1019)
Q Consensus 869 ~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1019)
.... ...........++..|+|||...+..++.++||||||+++||+++|..||..... .+.........
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~---- 217 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQNILNGK---- 217 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcCC----
Confidence 1100 0001122335678899999999888899999999999999999999999965321 11111100000
Q ss_pred cChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 948 VDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 948 ~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
. ..|.. ......+.+++.+||+.+|++|| |+.++.+.+
T Consensus 218 --------~-----~~~~~------~~~~~~~~~~i~~~l~~~p~~Rp-t~~~~~~~l 255 (265)
T cd05579 218 --------I-----EWPED------VEVSDEAIDLISKLLVPDPEKRL-GAKSIEEIK 255 (265)
T ss_pred --------c-----CCCcc------ccCCHHHHHHHHHHhcCCHhhcC-CCccHHHHh
Confidence 0 00000 00145678999999999999999 995555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=298.60 Aligned_cols=274 Identities=22% Similarity=0.227 Sum_probs=196.3
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|++.+.||+|+||+||+|+...+++.||||.+..... .......+|+..+++++ |||++++++++... +..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-----~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-----DELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-----CcEEE
Confidence 6788999999999999999988899999999864422 22234567999999998 99999999998775 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||+ +|++.+++..... ..+++..+..++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 8899998876541 2389999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG-SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ 942 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 942 (1019)
...... ......++..|+|||++.+ ..++.++||||||+++|||++|++||...... ............
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~ 217 (283)
T cd07830 148 EIRSRP--------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI--DQLYKICSVLGT 217 (283)
T ss_pred eccCCC--------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH--HHHHHHHHhcCC
Confidence 653211 1123467889999998754 45799999999999999999999999653221 111111111111
Q ss_pred chhhccChhhhhhhhccCCCCCCCCCC---ccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 943 RVIEIVDPLLLLEVRTNNSKNPCGDGR---GGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 943 ~~~~~~d~~l~~~~~~~~~~~p~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...+.......... ......|..... .........+.+++.+||+.+|++|| |++|++..
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-t~~ei~~~ 280 (283)
T cd07830 218 PTKQDWPEGYKLAS-KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP-TASQALQH 280 (283)
T ss_pred CChhhhhhHhhhhc-cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCC-CHHHHhhC
Confidence 00000000000000 000000000000 00001135688999999999999999 99998753
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-32 Score=297.89 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=194.1
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc-chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcce
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ......+..|+.++.+.. ||||+++++++.+. ..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD-----SD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC-----Ce
Confidence 367899999999999999999998889999999997543 233455667777776664 99999999999876 67
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
.|+||||++ +++.+++..... .+++..+..++.|++.|++|||+ . +|+||||+|+||+++.++.+||+||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~df 159 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDF 159 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECcc
Confidence 899999984 578777765331 38999999999999999999997 5 8999999999999999999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE----ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~ 935 (1019)
|.+....... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+.
T Consensus 160 g~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~ 227 (296)
T cd06618 160 GISGRLVDSK--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE----FEV 227 (296)
T ss_pred ccchhccCCC--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHH
Confidence 9987542211 112235788999999987553 788999999999999999999999642111 111
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
........... . + .. ..+..++.+++.+||+.||++|| +++++++.-
T Consensus 228 ~~~~~~~~~~~-----~-----------~---~~---~~~~~~l~~li~~~l~~~p~~Rp-~~~~il~~~ 274 (296)
T cd06618 228 LTKILQEEPPS-----L-----------P---PN---EGFSPDFCSFVDLCLTKDHRKRP-KYRELLQHP 274 (296)
T ss_pred HHHHhcCCCCC-----C-----------C---CC---CCCCHHHHHHHHHHccCChhhCC-CHHHHhcCh
Confidence 11111100000 0 0 00 01245679999999999999999 999998753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-33 Score=296.35 Aligned_cols=244 Identities=24% Similarity=0.312 Sum_probs=192.7
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEee
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEY 787 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~ 787 (1019)
++||.|.||+||-|+++++|+.||||++.+.. ......+.+|+.|++++.||.||.+...|++. +..+.|||-
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~-----ervFVVMEK 644 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP-----ERVFVVMEK 644 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC-----ceEEEEehh
Confidence 68999999999999999999999999997432 23347789999999999999999999999988 778999999
Q ss_pred ccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC---CCeEEeeecccee
Q 001738 788 MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD---MVAHVGDFGLAKF 864 (1019)
Q Consensus 788 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~a~~ 864 (1019)
+. |+..+.+-.... ..+++.....+..||+.||.|||.+ +|||+|+||+|||+... .++||||||+|++
T Consensus 645 l~-GDMLEMILSsEk----gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 645 LH-GDMLEMILSSEK----GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred hc-chHHHHHHHhhc----ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceee
Confidence 95 455555544332 2389999999999999999999999 99999999999999643 5899999999998
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
+.+ ......++||+.|.|||++....|...-|+||.|||+|--++|..||+.. +++.+.+.. .
T Consensus 717 IgE--------ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQN-----A 779 (888)
T KOG4236|consen 717 IGE--------KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQN-----A 779 (888)
T ss_pred cch--------hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhhc-----c
Confidence 753 33445679999999999999999999999999999999999999999752 233222221 1
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.-++.+.-+ .|.....++++...++..-.+|. |++.-+.
T Consensus 780 aFMyPp~PW-------------------~eis~~AidlIn~LLqVkm~kRy-svdk~ls 818 (888)
T KOG4236|consen 780 AFMYPPNPW-------------------SEISPEAIDLINNLLQVKMRKRY-SVDKSLS 818 (888)
T ss_pred ccccCCCch-------------------hhcCHHHHHHHHHHHHHHHHHhc-chHhhcc
Confidence 111221111 22234457777788888888888 7765543
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.2e-32 Score=296.04 Aligned_cols=256 Identities=22% Similarity=0.275 Sum_probs=196.4
Q ss_pred CCCCCCceeccccEEEEEEEeC---CCCEEEEEEEeeccc----chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCC
Q 001738 705 EFSTSNMIGQGSFGFVYRGILG---EGGLLVAVKVLNLTR----KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 776 (1019)
+|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|++++.++ +||+|+++++.+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~--- 77 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD--- 77 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC---
Confidence 4788899999999999999863 467889999987432 22345678999999999 599999999988765
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEE
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 856 (1019)
...++||||+++++|.+++..... +++..+..++.|+++||+|||+. +++||||||+||+++.++.++|
T Consensus 78 --~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 78 --TKLHLILDYVNGGELFTHLYQREH------FTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred --CEEEEEEecCCCCcHHHHHhhcCC------cCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 678999999999999999875432 88999999999999999999999 9999999999999999999999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE--ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~ 934 (1019)
+|||+++...... ........|+..|+|||...+.. .+.++||||+|+++|||++|..||...... ....+
T Consensus 147 ~dfg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~ 219 (288)
T cd05583 147 TDFGLSKEFLAEE------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSE 219 (288)
T ss_pred EECcccccccccc------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHH
Confidence 9999987643221 11122346889999999987654 788999999999999999999998642111 11111
Q ss_pred HHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 935 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
........ .+ +. + ......+.+++.+||+.||++|| |+.++.+.|+.
T Consensus 220 ~~~~~~~~------~~-------------~~---~---~~~~~~l~~li~~~l~~~p~~R~-t~~~~~~~l~~ 266 (288)
T cd05583 220 ISRRILKS------KP-------------PF---P---KTMSAEARDFIQKLLEKDPKKRL-GANGADEIKNH 266 (288)
T ss_pred HHHHHHcc------CC-------------CC---C---cccCHHHHHHHHHHhcCCHhhcc-CcchHHHHhcC
Confidence 11110000 00 00 0 01234578899999999999999 99888776654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=296.73 Aligned_cols=272 Identities=25% Similarity=0.309 Sum_probs=199.7
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|+..+.||+|+||.||+|+...+++.||+|++.... ....+.+..|+.++++++|+|++++++++... ...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 567789999999999999999889999999997653 33346778899999999999999999998766 67899
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
||||++ ++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~-~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 59999998753 1389999999999999999999999 99999999999999999999999999997
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCC-
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP- 941 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~- 941 (1019)
...... .......++..|+|||.+.+. .++.++||||+||++||+++|++||...... ...........
T Consensus 147 ~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~ 217 (282)
T cd07829 147 AFGIPL-------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFKIFQILGT 217 (282)
T ss_pred ccCCCc-------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCC
Confidence 653211 111223457889999998766 7899999999999999999999999653211 11111111110
Q ss_pred --cchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 942 --QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 942 --~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
........... .........+..............+.+++.+||+.||++|| ++++++.
T Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp-~~~~~l~ 278 (282)
T cd07829 218 PTEESWPGVTKLP--DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI-SAKEALK 278 (282)
T ss_pred CcHHHHHhhcccc--cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC-CHHHHhh
Confidence 00000000000 00000000000000011111245689999999999999999 9999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6e-33 Score=286.22 Aligned_cols=203 Identities=26% Similarity=0.352 Sum_probs=177.1
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 777 (1019)
...+|....+||+|+||.|-+|..+.+.+.+|||+++++ .++..+--+.|-+++..- +-|.++++..+|.+.
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm---- 422 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM---- 422 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh----
Confidence 345799999999999999999999989999999999754 233344456777777766 578899999999887
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEe
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 857 (1019)
+..|+||||+.||+|--.+++.+. +.+..+..+|.+||-||-+||++ ||++||+|.+|||+|.+|++||+
T Consensus 423 -DRLyFVMEyvnGGDLMyhiQQ~Gk------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~ 492 (683)
T KOG0696|consen 423 -DRLYFVMEYVNGGDLMYHIQQVGK------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIA 492 (683)
T ss_pred -hheeeEEEEecCchhhhHHHHhcc------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEee
Confidence 778999999999999999988765 78888999999999999999999 99999999999999999999999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
|||+++.- ......+..++|||.|+|||++...+|+.++|.||+||++|||+.|++||++.
T Consensus 493 DFGmcKEn-------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 493 DFGMCKEN-------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred eccccccc-------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999742 22334455689999999999999999999999999999999999999999873
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=292.16 Aligned_cols=253 Identities=24% Similarity=0.302 Sum_probs=193.5
Q ss_pred CCCCCCceeccccEEEEEEEeC---CCCEEEEEEEeeccc----chhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCC
Q 001738 705 EFSTSNMIGQGSFGFVYRGILG---EGGLLVAVKVLNLTR----KGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSH 776 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 776 (1019)
+|++.+.||+|+||.||+|+.. .+|+.||+|+++... ....+.+.+|+++++++ +|++|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--- 77 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD--- 77 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC---
Confidence 4788999999999999999874 478999999987432 22346678899999999 599999999988765
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEE
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 856 (1019)
...++||||+++++|.+++..... +++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 78 --TKLHLILDYINGGELFTHLSQRER------FKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred --CeEEEEEecCCCCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 678999999999999999976543 88999999999999999999999 9999999999999999999999
Q ss_pred eeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 001738 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS--EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 857 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~ 934 (1019)
+|||++....... ........|+..|+|||...+. .++.++||||||+++|+|++|..||..... .....+
T Consensus 147 ~dfg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~ 219 (290)
T cd05613 147 TDFGLSKEFHEDE------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAE 219 (290)
T ss_pred eeCccceeccccc------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHH
Confidence 9999997642211 1112235688999999998753 468899999999999999999999864211 111111
Q ss_pred HHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchh----HhHHHHHH
Q 001738 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRT----LEMRNVVA 1003 (1019)
Q Consensus 935 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP----~s~~evl~ 1003 (1019)
......... + |.. ......+.+++.+||+.||++|| +++++++.
T Consensus 220 ~~~~~~~~~------~-------------~~~------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 220 ISRRILKSE------P-------------PYP------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHHhhccC------C-------------CCC------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 111110000 0 000 01234578999999999999996 25566654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-34 Score=278.89 Aligned_cols=254 Identities=22% Similarity=0.250 Sum_probs=192.2
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEEEEe
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
...||.|+||+|++..++.+|+..|||.++.... ...+++..|.+...+- +.|+||++||.+... +..|+.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-----GdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-----GDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-----CceeeeHH
Confidence 3579999999999999999999999999986544 4567888888865554 799999999988776 66899999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecc
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 866 (1019)
.| ..|++.+.+.... .....+++.-+-.|....+.||.||.+.. .|+|||+||+|||++..|.+||||||.+..+.
T Consensus 144 LM-d~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LM-DISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HH-hhhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 99 5677665443211 01223888888889999999999998764 89999999999999999999999999997653
Q ss_pred ccCCCCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcch
Q 001738 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944 (1019)
Q Consensus 867 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 944 (1019)
.+ ...+.-.|-..|||||.+.. ..|+.+|||||+|+++||++||+.|+..... ..+..........
T Consensus 220 ~S--------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vfeql~~Vv~gdp 287 (361)
T KOG1006|consen 220 DS--------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----VFEQLCQVVIGDP 287 (361)
T ss_pred HH--------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----HHHHHHHHHcCCC
Confidence 22 22233467889999998864 3589999999999999999999999865322 2222222222211
Q ss_pred hhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 945 ~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..+..+ ..-.+....+..++..|+.+|-.+|| ..+++.+
T Consensus 288 p~l~~~-------------------~~~~~~s~~~~~fintCl~Kd~~~Rp-ky~~Lk~ 326 (361)
T KOG1006|consen 288 PILLFD-------------------KECVHYSFSMVRFINTCLIKDRSDRP-KYDDLKK 326 (361)
T ss_pred CeecCc-------------------ccccccCHHHHHHHHHHhhcccccCc-chhhhhc
Confidence 111111 11122356789999999999999999 9998865
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=324.31 Aligned_cols=148 Identities=32% Similarity=0.453 Sum_probs=132.8
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
.++|.+.++||+|+||+||+|++..+++.||||+++... ......+..|+.+++.++||||+++++++... .
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-----~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA-----N 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-----C
Confidence 368999999999999999999999899999999997432 23346788999999999999999999988766 6
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
+.|+||||+++++|.+++..... +++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~~------l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYGY------FDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 78999999999999999976542 78899999999999999999999 9999999999999999999999999
Q ss_pred cccee
Q 001738 860 GLAKF 864 (1019)
Q Consensus 860 g~a~~ 864 (1019)
|+++.
T Consensus 149 Gls~~ 153 (669)
T cd05610 149 GLSKV 153 (669)
T ss_pred CCCcc
Confidence 99863
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-33 Score=318.73 Aligned_cols=208 Identities=25% Similarity=0.332 Sum_probs=181.2
Q ss_pred HHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeec---ccchhhHHHHHHHHHHhcCCCCCcceEEEEEecC
Q 001738 697 AELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL---TRKGAFKSFVAECEALRNIRHRNLIKIITICSSI 773 (1019)
Q Consensus 697 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 773 (1019)
.++.-..++|++.++||+|+||.|..++++.+++.||+|++.+ -......-|..|-++|..-..+=|+++...|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3444556799999999999999999999999999999999864 2334446788999999988889999998888776
Q ss_pred CCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC
Q 001738 774 DSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV 853 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 853 (1019)
.+.|+|||||+||+|-..+..... +++..++.++.+|+-||.-+|+. |+|||||||+|||+|..|+
T Consensus 148 -----~~LYlVMdY~pGGDlltLlSk~~~------~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 148 -----RYLYLVMDYMPGGDLLTLLSKFDR------LPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred -----cceEEEEecccCchHHHHHhhcCC------ChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCc
Confidence 889999999999999999987763 89999999999999999999999 9999999999999999999
Q ss_pred eEEeeeccceeccccCCCCCCCCCcccccccCCcccCccccc----C-CCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 854 AHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM----G-SEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+||+|||.+-.+..++ .......+|||-|.+||++. + +.|++.+|.||+||++|||+.|..||..
T Consensus 214 ikLADFGsClkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred EeeccchhHHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 9999999987664322 22344568999999999864 3 5799999999999999999999999975
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=289.39 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=194.1
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-----cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-----RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
+|.+.+.||+|+||.||+|++...+..+++|+.+.. ......++..|+.++++++||||+++++++.+. .
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER-----D 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-----C
Confidence 588999999999999999999877777777776532 122334567899999999999999999988765 5
Q ss_pred eEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeee
Q 001738 780 FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDF 859 (1019)
Q Consensus 780 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 859 (1019)
..++||||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++|+||||+||+++. +.+||+||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 689999999999999998753221 23489999999999999999999999 9999999999999975 57999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
|.+....... .......|++.|+|||...+..++.++||||+|+++|+|++|..||.... ..+.....
T Consensus 150 g~~~~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~ 217 (260)
T cd08222 150 GVSRLLMGSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRI 217 (260)
T ss_pred CceeecCCCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHH
Confidence 9987653211 11223457889999999888888999999999999999999999986421 11111111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.... .+.. ...+...+.+++.+||+.+|++|| ++.|+++
T Consensus 218 ~~~~-----~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rp-~~~~il~ 256 (260)
T cd08222 218 VEGP-----TPSL-------------------PETYSRQLNSIMQSMLNKDPSLRP-SAAEILR 256 (260)
T ss_pred HcCC-----CCCC-------------------cchhcHHHHHHHHHHhcCChhhCc-CHHHHhh
Confidence 1000 0000 012345678999999999999999 9999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-32 Score=297.64 Aligned_cols=242 Identities=22% Similarity=0.204 Sum_probs=195.8
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcce
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+..|++...+|.|+|+.|-.+.+..+++..++|++.... .+..+|+.++... +||||+++.+++.+. .+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~-----~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDG-----KE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCC-----ce
Confidence 3567888889999999999999999999999999997552 2234677666666 699999999999887 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe-CCCCCeEEeee
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL-DHDMVAHVGDF 859 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kL~Df 859 (1019)
.|+|||.+.|+-+.+.+...+. ...++..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+||
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~~-------~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKPE-------FCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred eeeeehhccccHHHHHHHhcch-------hHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 9999999999988888877653 3377788999999999999999 99999999999999 68999999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
|.++..... ....+-|..|.|||+.....|++++|+||||+++|+|++|+.||.....+ .+.....
T Consensus 461 G~a~~~~~~----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i 526 (612)
T KOG0603|consen 461 GFWSELERS----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRI 526 (612)
T ss_pred chhhhCchh----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhh
Confidence 999865332 12234588999999999999999999999999999999999999875444 1111111
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
-...+. +...+...+++.+|++.||.+|| +++++...
T Consensus 527 ~~~~~s---------------------------~~vS~~AKdLl~~LL~~dP~~Rl-~~~~i~~h 563 (612)
T KOG0603|consen 527 QMPKFS---------------------------ECVSDEAKDLLQQLLQVDPALRL-GADEIGAH 563 (612)
T ss_pred cCCccc---------------------------cccCHHHHHHHHHhccCChhhCc-ChhhhccC
Confidence 111111 12244568999999999999999 99998653
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-32 Score=247.58 Aligned_cols=201 Identities=23% Similarity=0.376 Sum_probs=169.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
+|...++||+|.||+||+|+.+++++.||+|.++.+++ +-.....+|+-+++.++|.|||+++++.... ...-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd-----kklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-----KKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC-----ceeE
Confidence 56677899999999999999999999999999875543 3356778999999999999999999987765 6688
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+|+||| ..+|..+...-.. .++...++.++.|+++|+.+.|++ ++.|||+||+|.+++.+|+.|++|||+|
T Consensus 78 lvfe~c-dqdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFC-DQDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHh-hHHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 999999 4589888876543 288999999999999999999999 9999999999999999999999999999
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccccCCC-CCCcchHHHHHHHHHHHHh-CCCCCCCCC
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFI-RKRPTDSMF 926 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~ell~-g~~Pf~~~~ 926 (1019)
+-+.- +.......+-|..|++|.++.|.+ |+...|+||.|||+.|+.. |++-|.+..
T Consensus 149 rafgi-------pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d 207 (292)
T KOG0662|consen 149 RAFGI-------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_pred hhcCC-------ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence 85421 111223346699999999998865 8999999999999999998 666676643
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=282.82 Aligned_cols=237 Identities=32% Similarity=0.363 Sum_probs=190.8
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeec
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYM 788 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~ 788 (1019)
||+|+||.||++.+..+++.||+|++.... ......+..|++++++++|||++++++.+... ...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE-----EKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC-----CeeEEEEecC
Confidence 699999999999998889999999987543 22456788999999999999999999988765 6789999999
Q ss_pred cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceecccc
Q 001738 789 QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868 (1019)
Q Consensus 789 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 868 (1019)
++++|.+++..... +++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~------l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKEGR------FSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999999986642 89999999999999999999998 9999999999999999999999999999765321
Q ss_pred CCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 869 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
. .......++..|+|||...+...+.++|+||||+++||+++|..||..... .+.........
T Consensus 147 ~-------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~----- 209 (250)
T cd05123 147 G-------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDP----- 209 (250)
T ss_pred C-------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCC-----
Confidence 1 122345678899999999888889999999999999999999999965321 11111111000
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN 1000 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~e 1000 (1019)
. ..| ......+.+++.+||..||++|| ++.+
T Consensus 210 ---~---------~~~--------~~~~~~l~~~i~~~l~~~p~~R~-~~~~ 240 (250)
T cd05123 210 ---L---------RFP--------EFLSPEARDLISGLLQKDPTKRL-GSGG 240 (250)
T ss_pred ---C---------CCC--------CCCCHHHHHHHHHHhcCCHhhCC-Cccc
Confidence 0 000 00134578999999999999999 9943
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=314.98 Aligned_cols=264 Identities=27% Similarity=0.403 Sum_probs=206.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeC---C----CCEEEEEEEeecc-cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILG---E----GGLLVAVKVLNLT-RKGAFKSFVAECEALRNI-RHRNLIKIITICSSI 773 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~---~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 773 (1019)
.++..+.+.+|+|.||.||+|... . ....||||..+.. ...+.+.+..|+++|+.+ +|+||+.++|+|...
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344566779999999999999743 1 2568999999744 334568899999999999 599999999999884
Q ss_pred CCCCcceEEEEEeeccCCCHHHHHhccC-C-CCCc--------cCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCC
Q 001738 774 DSHGVDFKALVYEYMQNGSLEEWLHHSN-D-QHDV--------CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKP 843 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~-~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 843 (1019)
...++|+||++.|+|.++++..+ . .... ..++..+.+.++.|||.|++||++. ++||||+.+
T Consensus 375 -----~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 375 -----GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred -----CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 66899999999999999999877 1 0001 2389999999999999999999999 999999999
Q ss_pred CceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccc--cCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCC
Q 001738 844 SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK--GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKR 920 (1019)
Q Consensus 844 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~ 920 (1019)
+||++..+..+||+|||+|+........... ... -...|||||.+....|+.+||||||||++||+++ |..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~------~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTK------SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEec------CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 9999999999999999999865433321111 111 2456999999999999999999999999999999 888
Q ss_pred CCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHH
Q 001738 921 PTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN 1000 (1019)
Q Consensus 921 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~e 1000 (1019)
||.+.... ..+.+.... +.+.+..+.|..+++++|..||+.+|++|| ++.|
T Consensus 521 PYp~~~~~-~~l~~~l~~---------------------------G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP-~F~~ 571 (609)
T KOG0200|consen 521 PYPGIPPT-EELLEFLKE---------------------------GNRMEQPEHCSDEIYDLMKSCWNADPEDRP-TFSE 571 (609)
T ss_pred CCCCCCcH-HHHHHHHhc---------------------------CCCCCCCCCCCHHHHHHHHHHhCCCcccCC-CHHH
Confidence 98762211 111111110 111122234677789999999999999999 9999
Q ss_pred HHHHHHHHH
Q 001738 1001 VVAKLCAAR 1009 (1019)
Q Consensus 1001 vl~~L~~i~ 1009 (1019)
+.+.+....
T Consensus 572 ~~~~~~~~l 580 (609)
T KOG0200|consen 572 CVEFFEKHL 580 (609)
T ss_pred HHHHHHHHH
Confidence 999998854
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-33 Score=269.37 Aligned_cols=285 Identities=22% Similarity=0.333 Sum_probs=204.1
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC---Cc
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH---GV 778 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~ 778 (1019)
+.|+...+||+|.||+||+|+.+.+|+.||+|+.-.+ ..+......+|++++..++|+|++.++.+|.....+ ..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 4677788999999999999999999999999875432 233345568999999999999999998877654322 23
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...|+|+.+|+. +|...+.... ..++..++.++++++..||.|+|+. .|+|||+||.|++++.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 468999999965 8888887653 2389999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCC-cccHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFND-GLTIHEFA 936 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~-~~~~~~~~ 936 (1019)
||+|+.+..... ......+..+.|..|++||.+.|. .|+++.|||+.|||+.||++|.+-+.+..+. ........
T Consensus 168 FGlar~fs~~~n---~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~L 244 (376)
T KOG0669|consen 168 FGLARAFSTSKN---VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQL 244 (376)
T ss_pred cccccceecccc---cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHH
Confidence 999976543321 122223455679999999987764 6999999999999999999999988764332 11122222
Q ss_pred HHhCCcchhhccCh-hhhhhhhccCCCCCCCCCCccHHHHH------HHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 937 MKALPQRVIEIVDP-LLLLEVRTNNSKNPCGDGRGGIEECL------VAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 937 ~~~~~~~~~~~~d~-~l~~~~~~~~~~~p~~~~~~~~~~~~------~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...+..+.+.-+|. .+.... ..+..|.+.. ..++... +.-.+++..++..||.+|+ ++++++..
T Consensus 245 cGs~tkevWP~~d~lpL~~si--e~ePl~~~~~-rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~-~ad~alnh 315 (376)
T KOG0669|consen 245 CGSITKEVWPNVDNLPLYQSI--ELEPLPKGQK-RKVKNRLKPYVKDDEALDLLEKLLKLDPTKRI-DADQALNH 315 (376)
T ss_pred hccCCcccCCCcccchHHHhc--cCCCCCcchh-hhhhhhcccccCChhHHHHHHHHhccCcccCc-chHhhhch
Confidence 22222222222221 111111 0000111110 0111111 1457889999999999999 99998753
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=281.26 Aligned_cols=220 Identities=20% Similarity=0.128 Sum_probs=175.1
Q ss_pred cccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHH
Q 001738 715 GSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLE 794 (1019)
Q Consensus 715 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~ 794 (1019)
|.||.||+|++..+++.||+|+++... ...+|...+....|||++++++++... +..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSE-----DSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecC-----CeEEEEEecCCCCCHH
Confidence 899999999999999999999997543 223455555566799999999988765 6789999999999999
Q ss_pred HHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCC
Q 001738 795 EWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874 (1019)
Q Consensus 795 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 874 (1019)
+++..... +++..+..++.|++.||+|+|+. +|+||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~~~------l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~------ 138 (237)
T cd05576 74 SHISKFLN------IPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS------ 138 (237)
T ss_pred HHHHHhcC------CCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc------
Confidence 99876542 89999999999999999999999 9999999999999999999999999987654211
Q ss_pred CCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhh
Q 001738 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLL 954 (1019)
Q Consensus 875 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 954 (1019)
.....++..|+|||...+..++.++||||+||++|||++|+.|+....... .......
T Consensus 139 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------------~~~~~~~--- 196 (237)
T cd05576 139 ----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------------NTHTTLN--- 196 (237)
T ss_pred ----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------------ccccccC---
Confidence 112345778999999988889999999999999999999998875321100 0000000
Q ss_pred hhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhH
Q 001738 955 EVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEM 998 (1019)
Q Consensus 955 ~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~ 998 (1019)
.| ......+.+++.+|++.||++|| ++
T Consensus 197 --------~~--------~~~~~~~~~li~~~l~~dp~~R~-~~ 223 (237)
T cd05576 197 --------IP--------EWVSEEARSLLQQLLQFNPTERL-GA 223 (237)
T ss_pred --------Cc--------ccCCHHHHHHHHHHccCCHHHhc-CC
Confidence 00 01134578899999999999999 86
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=268.74 Aligned_cols=201 Identities=25% Similarity=0.354 Sum_probs=178.7
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 778 (1019)
..+|+..++||+|+|++|..++++++.+.||+|+++++ +++.....+.|-.+..+. +||.+|-+..+|.+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte----- 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE----- 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc-----
Confidence 46899999999999999999999999999999999754 444456667777777776 699999999999887
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
...++|.||++||+|--.+++.+. ++++.++.+..+|+-||.|||++ ||++||+|.+||++|..|++|++|
T Consensus 324 srlffvieyv~ggdlmfhmqrqrk------lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhc------CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 678999999999999877777654 99999999999999999999999 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+|+++.- ......+..++|||.|.|||++.+..|+...|.|++||+++||+.|+.||+-
T Consensus 395 ygmcke~-------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 395 YGMCKEG-------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred cchhhcC-------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 9999742 2234455678999999999999999999999999999999999999999974
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=266.41 Aligned_cols=274 Identities=23% Similarity=0.312 Sum_probs=211.3
Q ss_pred HHHHhhCCCCCCCceeccccEEEEEEEeCCCC-----EEEEEEEeecc-cchhhHHHHHHHHHHhcCCCCCcceEEEEEe
Q 001738 698 ELSKATGEFSTSNMIGQGSFGFVYRGILGEGG-----LLVAVKVLNLT-RKGAFKSFVAECEALRNIRHRNLIKIITICS 771 (1019)
Q Consensus 698 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 771 (1019)
++.....+++....+-+|.||+||.|.|++.. +.|-+|.++.. ++-+...+..|.-.+..+.|||+..+.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 33444556778889999999999999887443 34566766533 3334566788888888999999999999987
Q ss_pred cCCCCCcceEEEEEeeccCCCHHHHHhccCC--CCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC
Q 001738 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSND--QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849 (1019)
Q Consensus 772 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 849 (1019)
+.. ...+.++.++.-|+|..++...+. ......++..+...++.|++.|++|||++ +|||.||..+|.++|
T Consensus 358 e~~----~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 358 EDY----ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred ecc----CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 642 567889999999999999984332 11233477888999999999999999999 999999999999999
Q ss_pred CCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCC
Q 001738 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFND 928 (1019)
Q Consensus 850 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~ 928 (1019)
+.-++||+|=.+++.+.+.++..-. .....+..||+||.+....|+.++|||||||++|||+| |+.|+.+.+.
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLG-----DnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP- 504 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLG-----DNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP- 504 (563)
T ss_pred hheeEEeccchhccccCcccccccC-----CCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH-
Confidence 9999999999999987665533222 22345788999999999999999999999999999999 9999865321
Q ss_pred cccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAA 1008 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i 1008 (1019)
..+..+..+ .+ +-.+.-.|++++..+|.-||..+|++|| ++++++..|.+.
T Consensus 505 -fEm~~ylkd----------------Gy-----------RlaQP~NCPDeLf~vMacCWallpeeRP-sf~Qlv~cLseF 555 (563)
T KOG1024|consen 505 -FEMEHYLKD----------------GY-----------RLAQPFNCPDELFTVMACCWALLPEERP-SFSQLVICLSEF 555 (563)
T ss_pred -HHHHHHHhc----------------cc-----------eecCCCCCcHHHHHHHHHHHhcCcccCC-CHHHHHHHHHHH
Confidence 111111111 11 0111124788899999999999999999 999999999887
Q ss_pred HHhhh
Q 001738 1009 REAFL 1013 (1019)
Q Consensus 1009 ~~~~~ 1013 (1019)
.....
T Consensus 556 ~~qlt 560 (563)
T KOG1024|consen 556 HTQLT 560 (563)
T ss_pred HHHHh
Confidence 65543
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=250.63 Aligned_cols=213 Identities=23% Similarity=0.309 Sum_probs=171.9
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc-cchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceE
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT-RKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
+.......||+|+||.|-+.++..+|+..|+|.++.. ..+..++..+|+.+..+. .+|.+|++||.+... ...
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-----gdv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-----GDV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc-----ccE
Confidence 3445567899999999999999999999999999754 334457778899876665 699999999987665 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++.||.| .-||+.+.++.-.. ...+++..+-+|+..+.+||.|||++. .++|||+||+|||++.+|++|+||||.
T Consensus 121 wIcME~M-~tSldkfy~~v~~~--g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 121 WICMELM-DTSLDKFYRKVLKK--GGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred EEeHHHh-hhhHHHHHHHHHhc--CCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccc
Confidence 9999999 56888776653322 233899999999999999999999985 899999999999999999999999999
Q ss_pred ceeccccCCCCCCCCCcccccccCCcccCcccccC----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 001738 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG----SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 862 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~ 934 (1019)
+-.+.++- ..+-..|-..|||||.+.. ..|+-++||||+|+++.||.+++.||+........+.+
T Consensus 196 sG~L~dSi--------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 196 SGYLVDSI--------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred ceeehhhh--------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 98763322 1122457788999998653 36899999999999999999999999875554433333
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=302.88 Aligned_cols=277 Identities=19% Similarity=0.155 Sum_probs=172.0
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCC----CEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCC-CC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEG----GLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSID-SH 776 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~ 776 (1019)
..++|++.+.||+|+||.||+|++..+ +..||+|++...... +....| .++...+.++..++..+.... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 467899999999999999999999888 899999987633221 111111 112222222322222111111 11
Q ss_pred CcceEEEEEeeccCCCHHHHHhccCCCC--------------CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccC
Q 001738 777 GVDFKALVYEYMQNGSLEEWLHHSNDQH--------------DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 842 (1019)
.....++||||+++++|.+++....... .........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 2267899999999999999987543100 000122345678999999999999999 99999999
Q ss_pred CCceEeCC-CCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC----------------------CC
Q 001738 843 PSNVLLDH-DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS----------------------EA 899 (1019)
Q Consensus 843 p~NIll~~-~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~ 899 (1019)
|+|||++. ++.+||+|||+|+...... ........+++.|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 5899999999997543211 1222346789999999965322 23
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCc--chhhccChhhhhhhhccCCCCCCCCCCccHHHHHH
Q 001738 900 SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQ--RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLV 977 (1019)
Q Consensus 900 ~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~ 977 (1019)
+.++||||+||++|||+++..|++.. ...+.......-.+ .+....++....+... ..+.......
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~~~~ 424 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRR---------GFEVLDLDGG 424 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhh---------hhhhccccch
Confidence 45679999999999999977665321 00111111100000 0111111110000000 0000000122
Q ss_pred HHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 978 AVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 978 ~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
...+++.+|++.||++|| |++|+++.
T Consensus 425 ~~~dLi~~mL~~dP~kR~-ta~e~L~H 450 (566)
T PLN03225 425 AGWELLKSMMRFKGRQRI-SAKAALAH 450 (566)
T ss_pred HHHHHHHHHccCCcccCC-CHHHHhCC
Confidence 345899999999999999 99999874
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-32 Score=285.04 Aligned_cols=199 Identities=24% Similarity=0.323 Sum_probs=177.8
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT---RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.+++++..||-|+||.|-+++.......+|+|++++. +..+.+.+..|-.+|...+.|.||++|..|.+. .+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~-----ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS-----KY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc-----hh
Confidence 4566778899999999999998755556899988643 444567788999999999999999999998877 88
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
+|+.||-|-||.+.+.++..+. ++....+.++..+++|++|||++ |||+||+||+|.+++.+|.+||.|||
T Consensus 495 vYmLmEaClGGElWTiLrdRg~------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRGS------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcCC------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 9999999999999999988764 88889999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+|+.+. ....+..++|||.|.|||++.....+.++|.||+|+++|||++|.+||.+
T Consensus 566 FAKki~--------~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~ 621 (732)
T KOG0614|consen 566 FAKKIG--------SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG 621 (732)
T ss_pred hHHHhc--------cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 999764 34456678999999999999999999999999999999999999999976
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=270.96 Aligned_cols=137 Identities=26% Similarity=0.446 Sum_probs=119.9
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC-----C---CCcceEEEEEecCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-----H---RNLIKIITICSSID 774 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~ 774 (1019)
.++|.+.++||-|.|++||+|.+.++.+.||+|+.+.. ....+....|++++++++ | .+||++++.|....
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 37999999999999999999999999999999999743 334466789999999983 2 46999999998765
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEe
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL 848 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 848 (1019)
.++ .++|+|+|++ |.+|..+|+....+ .++...+++|++||+.||.|||..+ ||||-||||+|||+
T Consensus 156 pNG-~HVCMVfEvL-GdnLLklI~~s~Yr----Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNG-QHVCMVFEVL-GDNLLKLIKYSNYR----GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCC-cEEEEEehhh-hhHHHHHHHHhCCC----CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 554 8999999999 78999999876643 3999999999999999999999998 99999999999999
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=251.52 Aligned_cols=282 Identities=21% Similarity=0.283 Sum_probs=206.7
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcce
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 780 (1019)
..++|++.+++|+|.|++||.|....+.+.++||++++... +.+.+|+++++.+. ||||++++++..++.+ ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~S---kt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPES---KT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccc---cC
Confidence 34689999999999999999999888999999999986544 67889999999996 9999999999887765 56
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC-CCeEEeee
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDF 859 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~Df 859 (1019)
..+|+||+++.+....... ++..+++.++.|++.||.|+|+. ||.|||+||.|+|+|.. ...+|+|+
T Consensus 110 paLiFE~v~n~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 7899999998877665432 78888999999999999999999 99999999999999964 57999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~ 938 (1019)
|+|.++........ .+.+..|--||.+-.. .|+..-|+|||||++..|+..+.||-........+...+.-
T Consensus 178 GLAEFYHp~~eYnV--------RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 178 GLAEFYHPGKEYNV--------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred chHhhcCCCceeee--------eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 99998755443222 2457788899987654 58899999999999999999999986433333333333222
Q ss_pred hCCcchh-------hccChhhhhhh---hccCCCCCC-CCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH--H
Q 001738 939 ALPQRVI-------EIVDPLLLLEV---RTNNSKNPC-GDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK--L 1005 (1019)
Q Consensus 939 ~~~~~~~-------~~~d~~l~~~~---~~~~~~~p~-~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~--L 1005 (1019)
.-.+++. -.+||....-. .+..+.... .....- ...+.++++.+.+.+|-.+|+ |++|..+. +
T Consensus 250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl---~~peaiDlldklLrYDHqeRl-TakEam~HpyF 325 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL---VSPEAIDLLDKLLRYDHQERL-TAKEAMAHPYF 325 (338)
T ss_pred hChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc---CChHHHHHHHHHHhhcccccc-chHHHhcCchH
Confidence 1111111 11333332211 111111111 111111 124567888899999999999 99998763 4
Q ss_pred HHHHHhhh
Q 001738 1006 CAAREAFL 1013 (1019)
Q Consensus 1006 ~~i~~~~~ 1013 (1019)
..++++..
T Consensus 326 ~~~~~~~~ 333 (338)
T KOG0668|consen 326 APVREAES 333 (338)
T ss_pred HHHHHHhh
Confidence 55555443
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=267.08 Aligned_cols=239 Identities=29% Similarity=0.354 Sum_probs=192.1
Q ss_pred ccEEEEEEEeCCCCEEEEEEEeecccchh-hHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHH
Q 001738 716 SFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLE 794 (1019)
Q Consensus 716 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~ 794 (1019)
+||.||+|.+..+++.||+|++....... .+.+.+|++.+++++|++++++++++... ...++|+||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCHH
Confidence 58999999998889999999997654443 67899999999999999999999998765 6789999999999999
Q ss_pred HHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCC
Q 001738 795 EWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874 (1019)
Q Consensus 795 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 874 (1019)
+++..... +++..++.++.+++.+++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRGR------LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhccC------CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 99976543 78999999999999999999999 99999999999999999999999999998653321
Q ss_pred CCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhh
Q 001738 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLL 954 (1019)
Q Consensus 875 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 954 (1019)
......++..|+|||...+..++.++||||+|+++|++++|..||...... ....+.... .....
T Consensus 142 ---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~~----~~~~~------- 206 (244)
T smart00220 142 ---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKKIGK----PKPPF------- 206 (244)
T ss_pred ---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhc----cCCCC-------
Confidence 223456788999999998888999999999999999999999998653111 111111100 00000
Q ss_pred hhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 955 EVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 955 ~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.........++.+++.+|+..+|++|| ++.++++
T Consensus 207 --------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp-~~~~~~~ 240 (244)
T smart00220 207 --------------PPPEWKISPEAKDLIRKLLVKDPEKRL-TAEEALQ 240 (244)
T ss_pred --------------ccccccCCHHHHHHHHHHccCCchhcc-CHHHHhh
Confidence 000000245688999999999999999 9999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=274.35 Aligned_cols=210 Identities=24% Similarity=0.305 Sum_probs=177.0
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
.-|..++.||-|+||+|.+++..++...||+|.+++.+ +.+....+.|-+||.....+=||++|..|.+. +.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk-----dn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-----DN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC-----Cc
Confidence 35778889999999999999998899999999997553 44556788999999999999999999998887 78
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
+|+||+|++||++-.++-..+- +++..++.++.++..|+++.|.. |+|||||||+|||||.+|++||+|||
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 9999999999999999877664 88888999999999999999999 99999999999999999999999999
Q ss_pred cceecc---ccCCCC---------CCC-----------------------CCcccccccCCcccCcccccCCCCCCcchH
Q 001738 861 LAKFLY---TCQVDD---------VET-----------------------PSSSIGIKGTVGYVAPEYGMGSEASMAGDV 905 (1019)
Q Consensus 861 ~a~~~~---~~~~~~---------~~~-----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv 905 (1019)
++.-+. ++.+.. .+. .......+||+.|+|||++....|+..+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 985321 000000 000 001123579999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCC
Q 001738 906 YSFGILLLEMFIRKRPTDSMFN 927 (1019)
Q Consensus 906 wSlGvil~ell~g~~Pf~~~~~ 927 (1019)
||.|||+|||+.|++||-....
T Consensus 855 ws~gvil~em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTP 876 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCC
Confidence 9999999999999999976433
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=276.62 Aligned_cols=199 Identities=24% Similarity=0.378 Sum_probs=173.5
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--------chhhHHHHHHHHHHhcCC---CCCcceEEEEEe
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--------KGAFKSFVAECEALRNIR---HRNLIKIITICS 771 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~ 771 (1019)
..+|+..+.+|+|+||.|+.|.+++....|+||.+.+++ +......-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 457999999999999999999999999999999987542 111223457999999997 999999999999
Q ss_pred cCCCCCcceEEEEEeec-cCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC
Q 001738 772 SIDSHGVDFKALVYEYM-QNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH 850 (1019)
Q Consensus 772 ~~~~~~~~~~~lV~e~~-~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 850 (1019)
+. +++|++||-. +|.+|.+++..+.. +++.+...|++||+.|+++||+. ||||||||-+||.++.
T Consensus 640 dd-----d~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~ 705 (772)
T KOG1152|consen 640 DD-----DYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDS 705 (772)
T ss_pred cC-----CeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhcccccccc---CceecccccccEEEec
Confidence 88 7899999975 45599999987765 99999999999999999999999 9999999999999999
Q ss_pred CCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCC-CCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 851 DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 851 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+|-+||+|||.|.... ......++||..|+|||++.|.+| +..-|||++|+++|.++....||..
T Consensus 706 ~g~~klidfgsaa~~k---------sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 706 NGFVKLIDFGSAAYTK---------SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred CCeEEEeeccchhhhc---------CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999999999998653 233345789999999999999887 6778999999999999999999853
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-31 Score=258.38 Aligned_cols=202 Identities=26% Similarity=0.344 Sum_probs=168.1
Q ss_pred CCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 707 STSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 707 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
+--+.||-|+||.||.+++..+|+.||+|.+... +-...+++.+|++++..++|.|++..+++.......-..+.|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3457899999999999999999999999988532 22234678899999999999999998887655433333567889
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
+|.|. .+|...+-.... ++...++-+.+||++||+|||+. +|.||||||.|.+++.+...||||||+|+.
T Consensus 136 TELmQ-SDLHKIIVSPQ~------Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVSPQA------LTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHH-hhhhheeccCCC------CCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccc
Confidence 99884 588887766543 88899999999999999999999 999999999999999999999999999986
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
...+ ....++..+-|.+|+|||++.|. .|+.+.||||.|||+.|++.++.-|..
T Consensus 206 ee~d------~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 206 WDQR------DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred cchh------hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 4322 22334455678999999999875 699999999999999999999988865
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=282.71 Aligned_cols=214 Identities=20% Similarity=0.269 Sum_probs=156.5
Q ss_pred hhCCCCCCCceeccccEEEEEEEeC----------------CCCEEEEEEEeecccchhhHH--------------HHHH
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILG----------------EGGLLVAVKVLNLTRKGAFKS--------------FVAE 751 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 751 (1019)
..++|++.++||+|+||+||+|.+. ..++.||||.+........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3568999999999999999999752 245689999987543332222 3346
Q ss_pred HHHHhcCCCCCc-----ceEEEEEecCCCC---CcceEEEEEeeccCCCHHHHHhccCCC------------------CC
Q 001738 752 CEALRNIRHRNL-----IKIITICSSIDSH---GVDFKALVYEYMQNGSLEEWLHHSNDQ------------------HD 805 (1019)
Q Consensus 752 ~~~l~~l~h~ni-----v~~~~~~~~~~~~---~~~~~~lV~e~~~~gsL~~~l~~~~~~------------------~~ 805 (1019)
+.++.+++|.++ ++++++|...... .....++||||+++++|.++++..... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 6777777543211 124679999999999999998753210 01
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccC
Q 001738 806 VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885 (1019)
Q Consensus 806 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt 885 (1019)
...+++..++.++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||++....... ........++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~------~~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI------NFNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC------ccCccccCCC
Confidence 12356788999999999999999999 99999999999999999999999999997542211 1111123457
Q ss_pred CcccCcccccCCC--------------------C--CCcchHHHHHHHHHHHHhCCC-CCCC
Q 001738 886 VGYVAPEYGMGSE--------------------A--SMAGDVYSFGILLLEMFIRKR-PTDS 924 (1019)
Q Consensus 886 ~~y~aPE~~~~~~--------------------~--~~~sDvwSlGvil~ell~g~~-Pf~~ 924 (1019)
+.|+|||.+.... | ..+.||||+||++|||++|.. ||..
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 8999999875432 1 124799999999999999875 6643
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=286.03 Aligned_cols=248 Identities=27% Similarity=0.348 Sum_probs=186.8
Q ss_pred CCCCCceeccccE-EEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFG-FVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
|.-.+++|.|+-| .||+|.. .|+.||||.+-.+. .....+|+..++.- +|||||++++.-.+. .+.||
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~-----qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDR-----QFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCC-----ceEEE
Confidence 3344678999987 5799999 58999999885332 24567899999888 599999998876554 88999
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC---C--CCeEEee
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH---D--MVAHVGD 858 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kL~D 858 (1019)
..|.| ..+|.+++...... .........+.+..|++.||+|||+. +||||||||+||||+. + .+++|+|
T Consensus 581 alELC-~~sL~dlie~~~~d--~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 581 ALELC-ACSLQDLIESSGLD--VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EehHh-hhhHHHHHhccccc--hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 99999 56999999885211 11122245577899999999999998 9999999999999975 3 4799999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g-~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||+++.+..+.. ......+..||-+|+|||++....-+.++||||+||++|+.++| .+||.+....+.++...
T Consensus 655 fglsKkl~~~~s----S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~-- 728 (903)
T KOG1027|consen 655 FGLSKKLAGGKS----SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTG-- 728 (903)
T ss_pred cccccccCCCcc----hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcC--
Confidence 999998754331 23335667899999999999998888899999999999999995 89997643322211100
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
. ..+. .-....++ +..++|.+|++++|..|| +|.+|+.
T Consensus 729 -----~-~~L~-------------------~L~~~~d~--eA~dLI~~ml~~dP~~RP-sa~~VL~ 766 (903)
T KOG1027|consen 729 -----N-YTLV-------------------HLEPLPDC--EAKDLISRMLNPDPQLRP-SATDVLN 766 (903)
T ss_pred -----c-ccee-------------------eeccCchH--HHHHHHHHhcCCCcccCC-CHHHHhC
Confidence 0 0000 00011111 458999999999999999 9999975
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-29 Score=276.42 Aligned_cols=254 Identities=23% Similarity=0.307 Sum_probs=205.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..+|+..+.+|.|.||.||+|+++.+++..|+|+++....+..+-..+|+-+++..+||||+.+++.|... +..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~-----dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR-----DKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhh-----cCcE
Confidence 35899999999999999999999999999999999988777778889999999999999999999988776 5689
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+.||||.||+|.+.-+-... +++.++..++++..+|++|||+. |-+|||||-.||++++.|.+|+.|||.+
T Consensus 89 icMEycgggslQdiy~~Tgp------lselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTGP------LSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred EEEEecCCCcccceeeeccc------chhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 99999999999987766553 99999999999999999999999 9999999999999999999999999998
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCcccc---cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYG---MGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
..+.. +-.....+.||++|||||+. ..+.|...+|||+.|+...|+---++|-.+... .-.-+.+..
T Consensus 160 aqita-------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp---mr~l~LmTk 229 (829)
T KOG0576|consen 160 AQITA-------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP---MRALFLMTK 229 (829)
T ss_pred hhhhh-------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch---HHHHHHhhc
Confidence 75522 33455678999999999974 356799999999999999999888887432111 000000100
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
..++| .....-......+.+++..|+.++|++|| +++.++.
T Consensus 230 ------S~~qp----------------p~lkDk~kws~~fh~fvK~altknpKkRp-taeklL~ 270 (829)
T KOG0576|consen 230 ------SGFQP----------------PTLKDKTKWSEFFHNFVKGALTKNPKKRP-TAEKLLQ 270 (829)
T ss_pred ------cCCCC----------------CcccCCccchHHHHHHHHHHhcCCCccCC-Chhhhee
Confidence 11111 01111122345578999999999999999 9987765
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-29 Score=267.41 Aligned_cols=284 Identities=20% Similarity=0.237 Sum_probs=210.1
Q ss_pred ccCHHHHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC------CCCcceE
Q 001738 693 IVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR------HRNLIKI 766 (1019)
Q Consensus 693 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~ 766 (1019)
.+.+.++ ..++|.+....|+|-|++|.+|.+...|..||||++.... ...+.=.+|+++|+++. --|++++
T Consensus 423 rv~igE~--LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 423 RVRIGEL--LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred EEehhhh--hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 3444443 3568999999999999999999999889999999997443 22344578999999994 3568888
Q ss_pred EEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCce
Q 001738 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNV 846 (1019)
Q Consensus 767 ~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 846 (1019)
+..|... +++|+|+|-+ ..+|.+.++..+. ...+....+..++.|+.-||..|... ||+|.||||+||
T Consensus 500 ~r~F~hk-----nHLClVFE~L-slNLRevLKKyG~---nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNi 567 (752)
T KOG0670|consen 500 FRHFKHK-----NHLCLVFEPL-SLNLREVLKKYGR---NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNI 567 (752)
T ss_pred HHHhhhc-----ceeEEEehhh-hchHHHHHHHhCc---ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccce
Confidence 8777666 8999999988 6799999998774 34588899999999999999999998 999999999999
Q ss_pred EeCCC-CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 847 LLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 847 ll~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
|+.+. ..+||||||.|.+..... .+.+..+..|+|||++.|-+|+...|+||.||++||+.||+..|.+.
T Consensus 568 LVNE~k~iLKLCDfGSA~~~~ene---------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 568 LVNESKNILKLCDFGSASFASENE---------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred EeccCcceeeeccCcccccccccc---------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 99875 468999999998763322 23345678899999999999999999999999999999999999875
Q ss_pred CCCcccHHHHHHH---hCCcch-------hhccChhhhhhh------------hccCCCCC----------CCCCCccHH
Q 001738 926 FNDGLTIHEFAMK---ALPQRV-------IEIVDPLLLLEV------------RTNNSKNP----------CGDGRGGIE 973 (1019)
Q Consensus 926 ~~~~~~~~~~~~~---~~~~~~-------~~~~d~~l~~~~------------~~~~~~~p----------~~~~~~~~~ 973 (1019)
.+.. +...++. .+|..+ ..-+|..+..-+ .....-.| +..-+....
T Consensus 639 TNN~--MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~ 716 (752)
T KOG0670|consen 639 TNNQ--MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQP 716 (752)
T ss_pred CcHH--HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhH
Confidence 4432 2222221 111110 011111110000 00111111 112233334
Q ss_pred HHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 974 ECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 974 ~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.....+.+++..|+..||++|. |..+.++
T Consensus 717 ~~~~~~rdLLdkml~LdP~KRi-t~nqAL~ 745 (752)
T KOG0670|consen 717 KIVQQLRDLLDKMLILDPEKRI-TVNQALK 745 (752)
T ss_pred HHHHHHHHHHHHHhccChhhcC-CHHHHhc
Confidence 5667789999999999999999 9988765
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=237.94 Aligned_cols=252 Identities=17% Similarity=0.216 Sum_probs=189.2
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecCCCCCcceE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.+.|++.+.+|+|.||.+-+++++.+.+.+|+|.++... ...++|.+|...--.+ .|.||+.-|++..... +++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~----d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS----DAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcC----ceE
Confidence 357999999999999999999999999999999987443 3457889998866566 4899998887543321 678
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC--CCCCeEEeee
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD--HDMVAHVGDF 859 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kL~Df 859 (1019)
++++||++.|+|.+-+...+ +.+.....++.|++.|+.|||++ ++||||||.+|||+- +..++|+|||
T Consensus 98 vF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 89999999999999887655 78888999999999999999999 999999999999993 3458999999
Q ss_pred ccceeccccCCCCCCCCCcccccccCCcccCcccccCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 001738 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-----EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934 (1019)
Q Consensus 860 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~ 934 (1019)
|..+.... ......-+-.|.|||..... ...+.+|||.||+++|.+++|+.||+.....+..+.+
T Consensus 168 G~t~k~g~----------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 168 GLTRKVGT----------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred ccccccCc----------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 99875321 11222346678999975432 3578999999999999999999999865555555555
Q ss_pred HHHHhCCc--chhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 935 FAMKALPQ--RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 935 ~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
|....-.. ...+.+ ....++..++..+-+.++|++|- -+-++.+.
T Consensus 238 ~~~w~~rk~~~~P~~F------------------------~~fs~~a~r~Fkk~lt~~~~drc-ki~~~kk~ 284 (378)
T KOG1345|consen 238 WEQWLKRKNPALPKKF------------------------NPFSEKALRLFKKSLTPRFKDRC-KIWTAKKM 284 (378)
T ss_pred HHHHhcccCccCchhh------------------------cccCHHHHHHHHHhcCCcccccc-hhHHHHHH
Confidence 54322111 111111 11234556777778889999885 44444443
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=246.71 Aligned_cols=200 Identities=25% Similarity=0.280 Sum_probs=169.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCC-Ccce
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH-GVDF 780 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 780 (1019)
.+|.-.+.+|.|.- .|..|.+.-.+++||+|..... .....++..+|...+..+.|+||++++.++...... ....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777889999998 7888888888999999987432 233346678999999999999999999998654321 1256
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+|||+| ..+|...+... ++-..+..+..|++.|++|||+. ||+||||||+||++..+..+||.|||
T Consensus 96 ~y~v~e~m-~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILME--------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHHhh-hhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 89999999 56999988732 67788999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+|+.-. ..-..+.++.|..|+|||++.+..|.+.+||||.||++.||++|+.-|.+
T Consensus 164 ~ar~e~--------~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 164 LARTED--------TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred hhcccC--------cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 998431 22355678899999999999998899999999999999999999998874
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=238.19 Aligned_cols=211 Identities=31% Similarity=0.504 Sum_probs=182.1
Q ss_pred eeccccEEEEEEEeCCCCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccC
Q 001738 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQN 790 (1019)
Q Consensus 712 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~ 790 (1019)
||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++... ...++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 68999999999999877999999999765442 346789999999999999999999998876 678999999999
Q ss_pred CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCCeEEeeeccceeccccC
Q 001738 791 GSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDFGLAKFLYTCQ 869 (1019)
Q Consensus 791 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a~~~~~~~ 869 (1019)
++|.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999998652 1288999999999999999999999 9999999999999999 8999999999998653221
Q ss_pred CCCCCCCCcccccccCCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhcc
Q 001738 870 VDDVETPSSSIGIKGTVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948 (1019)
Q Consensus 870 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1019)
. ......+...|++||..... .++.++|+|++|++++++
T Consensus 148 ~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------- 187 (215)
T cd00180 148 S-------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------- 187 (215)
T ss_pred c-------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------
Confidence 0 12234578899999998877 788999999999999999
Q ss_pred ChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 949 DPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 949 d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.++.+++..|++.+|.+|| +++++++.
T Consensus 188 ----------------------------~~~~~~l~~~l~~~p~~R~-~~~~l~~~ 214 (215)
T cd00180 188 ----------------------------PELKDLIRKMLQKDPEKRP-SAKEILEH 214 (215)
T ss_pred ----------------------------HHHHHHHHHHhhCCcccCc-CHHHHhhC
Confidence 1257889999999999999 99999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-27 Score=248.04 Aligned_cols=286 Identities=26% Similarity=0.319 Sum_probs=205.7
Q ss_pred HHHhhCCCCCCCceeccccEEEEEEEeCC---CCEEEEEEEeecccchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCC
Q 001738 699 LSKATGEFSTSNMIGQGSFGFVYRGILGE---GGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITICSSID 774 (1019)
Q Consensus 699 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 774 (1019)
+....+.|..+++||+|.|++||+|.+.. ..+.||+|.+...... .++.+|++++..+. +.||+++.+++...
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnn- 107 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNN- 107 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccC-
Confidence 33455689999999999999999999876 6789999998765443 56889999999994 99999999988776
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-CCC
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-DMV 853 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~ 853 (1019)
+..++|+||++..+..++... ++..++..+++.+..||+++|.+ |||||||||+|++.+. .+.
T Consensus 108 ----d~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 108 ----DQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred ----CeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCC
Confidence 778999999999999988865 67788999999999999999999 9999999999999975 467
Q ss_pred eEEeeeccceeccccC------C-------C------------------------CCCCCCcccccccCCcccCcccccC
Q 001738 854 AHVGDFGLAKFLYTCQ------V-------D------------------------DVETPSSSIGIKGTVGYVAPEYGMG 896 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~------~-------~------------------------~~~~~~~~~~~~gt~~y~aPE~~~~ 896 (1019)
-.|+|||+|....... . . ............||++|+|||++.+
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 8999999997321110 0 0 0000111123569999999999876
Q ss_pred C-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh----------CCcc--hhh--c--cChhhhhhhhcc
Q 001738 897 S-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA----------LPQR--VIE--I--VDPLLLLEVRTN 959 (1019)
Q Consensus 897 ~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~----------~~~~--~~~--~--~d~~l~~~~~~~ 959 (1019)
. ..++++||||.|||+.-+++++.||-....+-..+.+.+.-. .++. +.+ - ..+.+...+...
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~ 331 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL 331 (418)
T ss_pred ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence 5 468899999999999999999999976555544444333221 1111 111 0 001111111110
Q ss_pred --CCCCCCCC---CCccHHH-HHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 960 --NSKNPCGD---GRGGIEE-CLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 960 --~~~~p~~~---~~~~~~~-~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.+-.++.. ..+...+ ....+++++.+|+..||.+|. |++|.++.
T Consensus 332 ~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRi-tAEeALkH 381 (418)
T KOG1167|consen 332 HIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRI-TAEDALKH 381 (418)
T ss_pred ChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcc-cHHHHhcC
Confidence 11111111 1111222 233689999999999999999 99999863
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=236.71 Aligned_cols=200 Identities=33% Similarity=0.501 Sum_probs=173.1
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch-hhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
|++.+.||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++... ...+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEEE
Confidence 56778999999999999999877899999999866544 567889999999999999999999998765 568999
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
+||+++++|.+++...... +++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 9999999999999865421 78899999999999999999999 999999999999999999999999999987
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccc-cCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYG-MGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
..... ........++..|++||.. ....++.++|||++|+++|||++|+.||+.
T Consensus 148 ~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDL------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcc------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 53321 0022335678899999998 666788899999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-27 Score=247.18 Aligned_cols=389 Identities=21% Similarity=0.214 Sum_probs=258.7
Q ss_pred ccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccc-cccCCCCCCcccccccccceec
Q 001738 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAG-NQFSGNVPPSIYNLSSLELLYL 251 (1019)
Q Consensus 173 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~-n~l~~~~p~~l~~l~~L~~L~L 251 (1019)
.-.+++|..|+|+...|.+|+.+.+|++||||+|.|+.+-|+.|.++.+|..|-+.+ |+|+..--..|.+|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 467899999999966667899999999999999999989999999999988887776 8998433356888999999999
Q ss_pred cCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCC------------CCCCcccccccCc
Q 001738 252 RGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFS------------GKVPINFSRLQNL 319 (1019)
Q Consensus 252 ~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~------------~~~p~~l~~l~~L 319 (1019)
.-|++. .++.+.+..+++|..|.+.+|.+..+--..|..+.+++.+.+..|.+- ...|.++++..-.
T Consensus 148 Nan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 148 NANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred Chhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 999987 888888888999999999999998554458889999999999888832 2233334444444
Q ss_pred ccccccCccCCCCCCCCCCccccccccccchhhcccCccccccCCccccccc-ccceEEeccCccccccCcccccCCCCc
Q 001738 320 SWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLS-TTTVQINMGRNQISGTIPSGIGNLVNL 398 (1019)
Q Consensus 320 ~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~-~~~~~L~l~~n~i~~~~p~~~~~l~~L 398 (1019)
.-..+.++++..+. +..+.... .....+....+.........|..+++|
T Consensus 227 ~p~rl~~~Ri~q~~------------------------------a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 227 SPYRLYYKRINQED------------------------------ARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred chHHHHHHHhcccc------------------------------hhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 44444444443332 22221110 111111122222222223468899999
Q ss_pred CeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccc
Q 001738 399 NGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQN 478 (1019)
Q Consensus 399 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 478 (1019)
+.|+|++|+++++-+.+|.++..++.|.|..|+|...-...|.++..|+.|+|.+|+|+..-|.+|..+.+|..|+|-.|
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 99999999999999999999999999999999999777788999999999999999999889999999999999999888
Q ss_pred cccCC-cchhhhhcc--------------ccccccccCCCcCCCC---ccccccC---------CCCCC-EEEccCcccC
Q 001738 479 KLTGA-LPKQIFNIT--------------TLSLYLDLSNNFLNDS---LPLEVGN---------LQNLV-ELDISRNQVS 530 (1019)
Q Consensus 479 ~l~~~-~p~~~~~~~--------------~~~~~L~ls~N~l~~~---~~~~~~~---------l~~L~-~L~Ls~N~l~ 530 (1019)
.+.-. --+++..+. ...+.+.++.+.+.+. .|++.+- ++-+. +...|++.++
T Consensus 357 p~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk 436 (498)
T KOG4237|consen 357 PFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK 436 (498)
T ss_pred cccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh
Confidence 77521 011222211 1111222222222110 1111110 11111 1122333332
Q ss_pred CCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEccCC
Q 001738 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599 (1019)
Q Consensus 531 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N 599 (1019)
.+|..+. ..-.+|++.+|.++ .+|.. .+.+| .+||++|+|+..--..|.++++|.+|-+++|
T Consensus 437 -~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 437 -LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 3333332 13345667777776 55555 45556 6777777776555556666666666666654
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=269.43 Aligned_cols=125 Identities=26% Similarity=0.406 Sum_probs=70.9
Q ss_pred cccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhccccccccc
Q 001738 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLD 499 (1019)
Q Consensus 420 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~L~ 499 (1019)
++|+.|+|++|...+.+|..++++++|+.|++++|..-+.+|..+ ++++|+.|++++|.....+|.
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~------------- 843 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD------------- 843 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc-------------
Confidence 455566666655544556666666666666666554333455444 455666666665433222221
Q ss_pred cCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccC-cccccCCCcccccccccCeeccccC
Q 001738 500 LSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSY-NSFRGGIPLSLSSLKSVKVLDLSSN 575 (1019)
Q Consensus 500 ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N 575 (1019)
. .++|+.|+|++|.++ .+|..+..+++|+.|+|++ |+++ .+|..+..+++|+.|++++|
T Consensus 844 ------------~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 844 ------------I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ------------c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 1 135666666666666 5666666666777777766 3444 45556666666666666666
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=267.46 Aligned_cols=293 Identities=22% Similarity=0.274 Sum_probs=180.2
Q ss_pred cccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceec
Q 001738 172 MRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYL 251 (1019)
Q Consensus 172 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L 251 (1019)
.+|++|++.+|++. .+|..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|++|.....+|.++.++++|+.|++
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 34666666666665 5666666666666666666544335553 566666666666666544466666666666666666
Q ss_pred cCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCC
Q 001738 252 RGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331 (1019)
Q Consensus 252 ~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 331 (1019)
++|...+.+|..+ ++++|+.|++++|...+.+|.. .++|++|+|++|.+. .+|..+ .+++|++|++.++....
T Consensus 689 ~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~ 761 (1153)
T PLN03210 689 SRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEK 761 (1153)
T ss_pred CCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhh
Confidence 6654444555543 4556666666666544444432 234555566655554 233332 34444444444322110
Q ss_pred CCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCC
Q 001738 332 GAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGT 411 (1019)
Q Consensus 332 ~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~ 411 (1019)
+ ... +....+..+...++|+.|++++|...+.
T Consensus 762 ---------------------------l----~~~-----------------~~~l~~~~~~~~~sL~~L~Ls~n~~l~~ 793 (1153)
T PLN03210 762 ---------------------------L----WER-----------------VQPLTPLMTMLSPSLTRLFLSDIPSLVE 793 (1153)
T ss_pred ---------------------------c----ccc-----------------ccccchhhhhccccchheeCCCCCCccc
Confidence 0 000 0001111223346788888888877778
Q ss_pred CchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhc
Q 001738 412 IPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNI 491 (1019)
Q Consensus 412 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 491 (1019)
+|.+++++++|+.|++++|..-+.+|..+ ++++|+.|++++|.....+|.. .++|+.|+|++|.++ .+
T Consensus 794 lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~i------- 861 (1153)
T PLN03210 794 LPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EV------- 861 (1153)
T ss_pred cChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cC-------
Confidence 88888888899999998875444677665 6888999999887654455543 356777777777776 33
Q ss_pred cccccccccCCCcCCCCccccccCCCCCCEEEccC-cccCCCCCccccCCCCCcEEeccCcc
Q 001738 492 TTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISR-NQVSGEIPATLSACTSLEYLNLSYNS 552 (1019)
Q Consensus 492 ~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~ 552 (1019)
|..+..+++|+.|+|++ |+++ .+|..+..+++|+.|++++|.
T Consensus 862 ------------------P~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 862 ------------------PWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ------------------hHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 45566677888888887 4555 567777888888888888774
|
syringae 6; Provisional |
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=210.99 Aligned_cols=170 Identities=20% Similarity=0.212 Sum_probs=127.3
Q ss_pred CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCC
Q 001738 791 GSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQV 870 (1019)
Q Consensus 791 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 870 (1019)
|+|.++++..+. .+++.+++.|+.|++.||+|||++ + ||+||+++.++.+|+ ||.+......
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc--
Confidence 689999976432 389999999999999999999998 6 999999999999999 9999865321
Q ss_pred CCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccCh
Q 001738 871 DDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDP 950 (1019)
Q Consensus 871 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 950 (1019)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..................+..
T Consensus 63 ----------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 125 (176)
T smart00750 63 ----------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD------- 125 (176)
T ss_pred ----------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC-------
Confidence 125789999999999999999999999999999999999999653221111111111100000
Q ss_pred hhhhhhhccCCCCCCCCCCccHHHHH--HHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHHh
Q 001738 951 LLLLEVRTNNSKNPCGDGRGGIEECL--VAVITIGVLCSMESPIDRTLEMRNVVAKLCAAREA 1011 (1019)
Q Consensus 951 ~l~~~~~~~~~~~p~~~~~~~~~~~~--~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~~ 1011 (1019)
+. .+....... .++.+++.+||+.+|.+|| ++.|+++.+..+...
T Consensus 126 -------------~~--~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp-~~~~ll~~~~~~~~~ 172 (176)
T smart00750 126 -------------PR--DRSNLESVSAARSFADFMRVCASRLPQRRE-AANHYLAHCRALFAE 172 (176)
T ss_pred -------------cc--ccccHHHHHhhhhHHHHHHHHHhccccccc-CHHHHHHHHHHHHHH
Confidence 00 000111222 2589999999999999999 999999998777543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-25 Score=232.21 Aligned_cols=253 Identities=22% Similarity=0.227 Sum_probs=180.9
Q ss_pred ccceeccCCCccCCCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhhccccccccccccccccccccceeec
Q 001738 100 FLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSI 179 (1019)
Q Consensus 100 ~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~~L~l 179 (1019)
.-..++|..|+|+..-|..|+.+++|+.||||+|+++..-|++|.++.+|..|.+-|||-+..+|...+.++..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 34578888899984444568899999999999999997779999999999999998888888899998888999999999
Q ss_pred ccccccCCCCccccCccccceeeecccccccCCCc-cccCccccceeeccccccC------------CCCCCcccccccc
Q 001738 180 ADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPN-TLGQLRNSFYLNIAGNQFS------------GNVPPSIYNLSSL 246 (1019)
Q Consensus 180 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~l~~n~l~------------~~~p~~l~~l~~L 246 (1019)
.-|++.-.....|..|++|..|.+-.|.+. .++. +|..+..++.+.++.|.+- ...|..++...-.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 999988666677888999999999999988 4554 8888999999998888732 2334444554444
Q ss_pred cceeccCCcccCCCCcccc-ccccccceEEecccccCCCCC-CcccCCCcCCeEecCCCcCCCCCCcccccccCcccccc
Q 001738 247 ELLYLRGNRLIGSLPIDIG-LTLPKLTNFVIAENNFSGPIP-NSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLL 324 (1019)
Q Consensus 247 ~~L~L~~N~l~~~lp~~~~-~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 324 (1019)
.-..+.++++. .++..-+ ..+..+..-..+.+..-++-| ..|..+++|++|+|++|+|+++-+.+|.++..++.|.|
T Consensus 227 ~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 227 SPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred chHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 45555555554 4443332 112223222333343444444 35888888999999999998888888888888888888
Q ss_pred cCccCCCCCCCCCCccccccccccchhhcccCcccc
Q 001738 325 AGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG 360 (1019)
Q Consensus 325 ~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~ 360 (1019)
..|+|..+... .+.+++.|+.|+|++|+|+
T Consensus 306 ~~N~l~~v~~~------~f~~ls~L~tL~L~~N~it 335 (498)
T KOG4237|consen 306 TRNKLEFVSSG------MFQGLSGLKTLSLYDNQIT 335 (498)
T ss_pred CcchHHHHHHH------hhhccccceeeeecCCeeE
Confidence 88888654322 2334444554554444444
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-24 Score=266.25 Aligned_cols=207 Identities=17% Similarity=0.247 Sum_probs=138.8
Q ss_pred cCCC-CCcceEEEEEecCCCCC--cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 001738 757 NIRH-RNLIKIITICSSIDSHG--VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQ 833 (1019)
Q Consensus 757 ~l~h-~niv~~~~~~~~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 833 (1019)
.++| +||+++++++......+ ....+.++||+ +++|.+++.... ..+++.+++.+++||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 3445 57778888764333222 13567788987 669999997532 2389999999999999999999999
Q ss_pred CCeEeeccCCCceEeCCCCCe-------------------EEeeeccceeccccCC---CC------CCCCCcccccccC
Q 001738 834 PPIIHGDLKPSNVLLDHDMVA-------------------HVGDFGLAKFLYTCQV---DD------VETPSSSIGIKGT 885 (1019)
Q Consensus 834 ~~ivH~Dlkp~NIll~~~~~~-------------------kL~Dfg~a~~~~~~~~---~~------~~~~~~~~~~~gt 885 (1019)
|||||||||+|||++..+.+ |++|||+++....... .. ...........||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 99999999999999655544 4555555542110000 00 0000011124689
Q ss_pred CcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCC
Q 001738 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPC 965 (1019)
Q Consensus 886 ~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~ 965 (1019)
+.|||||++.+..|+.++|||||||++|||++|.+|+.... ......... ..++..
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~--------~~~~~~------------- 234 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHR--------VLPPQI------------- 234 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHh--------hcChhh-------------
Confidence 99999999999999999999999999999999988864310 011111000 011100
Q ss_pred CCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 966 GDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 966 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
.....+...++.+||+++|.+|| ++.|+++.
T Consensus 235 -------~~~~~~~~~~~~~~L~~~P~~Rp-s~~eil~h 265 (793)
T PLN00181 235 -------LLNWPKEASFCLWLLHPEPSCRP-SMSELLQS 265 (793)
T ss_pred -------hhcCHHHHHHHHHhCCCChhhCc-ChHHHhhc
Confidence 00122346778899999999999 99999763
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=227.27 Aligned_cols=172 Identities=21% Similarity=0.145 Sum_probs=131.0
Q ss_pred HhhCCCCCCCceeccccEEEEEEEeCC-CCEEEEEEEeecc-----cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCC
Q 001738 701 KATGEFSTSNMIGQGSFGFVYRGILGE-GGLLVAVKVLNLT-----RKGAFKSFVAECEALRNIRHRNLIKIITICSSID 774 (1019)
Q Consensus 701 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 774 (1019)
...++|++.+.||+|+||+||+|++.. +++.||||++... .....+.+.+|++++++++|+|+++.+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 345789999999999999999998875 6788899987532 222356789999999999999998533221
Q ss_pred CCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecc-CCCceEeCCCCC
Q 001738 775 SHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDL-KPSNVLLDHDMV 853 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~ 853 (1019)
+..|+||||++|++|... . . .. ...++.|+++||+|||++ ||+|||| ||+||+++.++.
T Consensus 91 ----~~~~LVmE~~~G~~L~~~-~--~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHLA-R--P-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred ----CCcEEEEEccCCCCHHHh-C--c-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCC
Confidence 236899999999999632 1 1 11 135788999999999999 9999999 999999999999
Q ss_pred eEEeeeccceeccccCCCCC-CCCCcccccccCCcccCcccccC
Q 001738 854 AHVGDFGLAKFLYTCQVDDV-ETPSSSIGIKGTVGYVAPEYGMG 896 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~ 896 (1019)
+||+|||+|+.+........ ..........+++.|+|||++..
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999999997643321111 01111235678899999998764
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=205.32 Aligned_cols=207 Identities=22% Similarity=0.313 Sum_probs=177.9
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEEE
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.|++.++||+|+||+.+.|+.--++++||||.-...++ ..++..|.+..+.+. .+.|..+|.+-... .+-.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG-----~~NiL 101 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEG-----KYNIL 101 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeecccc-----chhhh
Confidence 79999999999999999999988999999997653332 266788999888884 78898888765554 56679
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-----CeEEee
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-----VAHVGD 858 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kL~D 858 (1019)
|+|.+ |.||+|++.-.+. .++...+..+|.|++.-++|+|++ ..|.|||||+|+||...+ .+.++|
T Consensus 102 VidLL-GPSLEDLFD~CgR-----~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD 172 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCGR-----RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID 172 (449)
T ss_pred hhhhh-CcCHHHHHHHhcC-----cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence 99988 8899999987654 299999999999999999999999 999999999999997654 589999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~ 927 (1019)
||+|+.+.+.......+........||.+||+--...|.+.+.+.|+=|+|=++.+.+.|..||.+...
T Consensus 173 FGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 173 FGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred ccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 999999876665555555566677899999999999999999999999999999999999999988544
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-23 Score=244.12 Aligned_cols=73 Identities=23% Similarity=0.356 Sum_probs=43.1
Q ss_pred cceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceeccC
Q 001738 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253 (1019)
Q Consensus 174 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 253 (1019)
-..|+|++|+|+ .+|..+.. +|+.|++++|+|+ .+|.. .++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchhc--CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 446677777776 66666643 5677777777766 35542 355666666666666 34432 24555566666
Q ss_pred Cccc
Q 001738 254 NRLI 257 (1019)
Q Consensus 254 N~l~ 257 (1019)
|.++
T Consensus 272 N~L~ 275 (788)
T PRK15387 272 NPLT 275 (788)
T ss_pred Cchh
Confidence 6554
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-23 Score=243.98 Aligned_cols=273 Identities=22% Similarity=0.338 Sum_probs=155.6
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCCCCCCCC----CCCCCCCCccee----------------eeeCCCCCeeeEEeeeccC
Q 001738 27 AGVPSNETDRLALLAIKSQLHDPLGVTSS----WNNSINLCQWTG----------------VTCGHRHQRVTKLYLRNQS 86 (1019)
Q Consensus 27 ~~~~~~~~~~~all~~k~~~~~~~~~~~s----W~~~~~~c~w~g----------------v~C~~~~~~v~~l~l~~~~ 86 (1019)
..+...++|.+.++...+.+.-| +++++ |++.++.|-=.. |.|.. ..||.+..-+..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p-~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~ 132 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFP-AYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESE 132 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCC-chhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--Cccccccccccc
Confidence 45566789999999999999665 34555 999999996444 67753 345555433311
Q ss_pred CCCccc--------------------c--------C-----cCCCcccceeccCCCccCCCCCcccCCCCCcceecccCc
Q 001738 87 IGGILS--------------------P--------H-----VGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANN 133 (1019)
Q Consensus 87 l~~~~~--------------------~--------~-----l~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n 133 (1019)
...... + . -+...+...|++++++++ .+|..+. ++|+.|+|++|
T Consensus 133 ~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N 209 (754)
T PRK15370 133 QASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNN 209 (754)
T ss_pred ccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCC
Confidence 111000 0 0 011234567777777777 5676553 46777777777
Q ss_pred cccCCCCccccCCcchhhhhhccccccccccccccccccccceeecccccccCCCCccccCccccceeeecccccccCCC
Q 001738 134 SFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIP 213 (1019)
Q Consensus 134 ~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p 213 (1019)
+++ .+|..+. ++|+.|++++|++. .+|..++ .+|+.|+|++|+++ .+|..+. ++|+.|++++|+|+ .+|
T Consensus 210 ~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP 278 (754)
T PRK15370 210 ELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLP 278 (754)
T ss_pred CCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccc
Confidence 777 5666553 35666666666554 4554443 24666666666665 5555543 35666666666666 455
Q ss_pred ccccCccccceeeccccccCCCCCCcccccccccceeccCCcccCCCCccccccccccceEEecccccCCCCCCcccCCC
Q 001738 214 NTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293 (1019)
Q Consensus 214 ~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 293 (1019)
..+. ++|+.|++++|+|+ .+|..+. ++|++|+|++|+++ .+|..+. ++|+.|++++|.+++ +|..+. +
T Consensus 279 ~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~l~--~ 346 (754)
T PRK15370 279 ENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLT-ALPETLP---PGLKTLEAGENALTS-LPASLP--P 346 (754)
T ss_pred cccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccc-cCCcccc---ccceeccccCCcccc-CChhhc--C
Confidence 5443 35666666666666 3454432 35666666666665 4454332 455666666666553 444432 4
Q ss_pred cCCeEecCCCcCCCCCCcccccccCcccccccCccCCC
Q 001738 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331 (1019)
Q Consensus 294 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 331 (1019)
+|+.|+|++|+|+ .+|..+. ++|++|+|++|++..
T Consensus 347 sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 347 ELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN 381 (754)
T ss_pred cccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC
Confidence 5666666666655 2343332 355555555555543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=219.78 Aligned_cols=268 Identities=21% Similarity=0.234 Sum_probs=196.5
Q ss_pred CCCCCCceeccccEEEEEEEeCCCC-EEEEEEEeecccchhhHHHHHHHHHHhcCCC----CCcceEEEEEe-cCCCCCc
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGG-LLVAVKVLNLTRKGAFKSFVAECEALRNIRH----RNLIKIITICS-SIDSHGV 778 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~-~~~~~~~ 778 (1019)
+|++.+.||+|+||.||.|.+..++ ..+|+|+...........+..|..++..+.. +++..+++... ..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~----- 93 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE----- 93 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC-----
Confidence 8999999999999999999987664 6899998875543333367889999988863 68888888774 33
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC-----CC
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-----MV 853 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~ 853 (1019)
.+.++||+.+ |.+|.++.+.... ..++...+..|+.|++.+|+++|+. |++||||||+|+.+... ..
T Consensus 94 ~~~~iVM~l~-G~sL~dl~~~~~~----~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~ 165 (322)
T KOG1164|consen 94 DFNFIVMSLL-GPSLEDLRKRNPP----GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRT 165 (322)
T ss_pred ceeEEEEecc-CccHHHHHHhCCC----CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccce
Confidence 6789999977 8899998866552 2399999999999999999999999 99999999999999865 36
Q ss_pred eEEeeeccceecc--ccCCCCCCCCCc-ccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcc
Q 001738 854 AHVGDFGLAKFLY--TCQVDDVETPSS-SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL 930 (1019)
Q Consensus 854 ~kL~Dfg~a~~~~--~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~ 930 (1019)
+.+.|||+|+... ............ .....||..|+++.+..+.+.+++.|+||++.++.|+..|..||........
T Consensus 166 ~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 166 LYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred EEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch
Confidence 9999999998332 211111011111 2456799999999999999999999999999999999999999965432211
Q ss_pred cHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHHH
Q 001738 931 TIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
..+...... ...... . + ......+.++...+-..+..++| ....+...+++...
T Consensus 246 -~~~~~~~~~----~~~~~~-~------------~-------~~~~~~~~~~~~~~~~~~~~~~P-dy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 246 -KSKFEKDPR----KLLTDR-F------------G-------DLKPEEFAKILEYIDSLDYEDKP-DYEKLAELLKDVFD 299 (322)
T ss_pred -HHHHHHHhh----hhcccc-c------------c-------CCChHHHHHHHHHhhccCCcCCC-CHHHHHHHHHHHHH
Confidence 111110000 000000 0 0 00133455666666668999999 99988888877665
Q ss_pred h
Q 001738 1011 A 1011 (1019)
Q Consensus 1011 ~ 1011 (1019)
.
T Consensus 300 ~ 300 (322)
T KOG1164|consen 300 S 300 (322)
T ss_pred h
Confidence 4
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=196.92 Aligned_cols=210 Identities=26% Similarity=0.349 Sum_probs=174.1
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCC-CCcceEEEEEecCCCCCcce
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRH-RNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 780 (1019)
..+.|.++++||.|+||.+|.|....+|+.||||+-...... .++..|.++.+.+++ ..|..+..+..+. .+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~-----~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEK-----DY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhcccc-----cc
Confidence 357899999999999999999999999999999987544332 567789999998864 5566666665554 66
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC---CCeEEe
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD---MVAHVG 857 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~ 857 (1019)
-.+||+.. |.||++.+.-... .++...++-++-|++.-++|+|.+ +.|||||||+|++..-+ ..+.++
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R-----~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSR-----RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhh-----hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEE
Confidence 78999988 8999999876543 289999999999999999999999 99999999999999644 468999
Q ss_pred eeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 001738 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927 (1019)
Q Consensus 858 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~ 927 (1019)
|||+|+.+.+......-+........||.+|++--...+...+.+.|+=|+|.++.+.-.|..||++...
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 9999998755544444444455567899999998888888889999999999999999999999987643
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-23 Score=242.72 Aligned_cols=85 Identities=25% Similarity=0.276 Sum_probs=57.7
Q ss_pred CcCeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccc
Q 001738 397 NLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVS 476 (1019)
Q Consensus 397 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 476 (1019)
+|+.|++++|++++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+.++++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 45666666666663 4432 2467777777777773 5543 245677888888887 677778888888888888
Q ss_pred cccccCCcchhhhh
Q 001738 477 QNKLTGALPKQIFN 490 (1019)
Q Consensus 477 ~N~l~~~~p~~~~~ 490 (1019)
+|+|++..|..+..
T Consensus 454 ~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 454 GNPLSERTLQALRE 467 (788)
T ss_pred CCCCCchHHHHHHH
Confidence 88888776665543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-23 Score=204.04 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=188.0
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL 783 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 783 (1019)
.....+|.+...|+.|+|+|. |..+++|++.... ....++|..|.-.++-+.||||..+++.|..+ ....+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~ 264 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVI 264 (448)
T ss_pred hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceE
Confidence 344567899999999999995 6678889886443 22346788999999999999999999999887 56789
Q ss_pred EEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 784 V~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
+..||+.|+|+..+++... ...+..+..+++.++|+|++|||+. .+-|----+.+..|++|++.+++|. .+-++
T Consensus 265 isq~mp~gslynvlhe~t~----vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~k 338 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQTS----VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTK 338 (448)
T ss_pred eeeeccchHHHHHHhcCcc----EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-cccce
Confidence 9999999999999998653 3367788999999999999999997 4344455689999999999988873 22222
Q ss_pred eccccCCCCCCCCCcccccccCCcccCcccccCCCC---CCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhC
Q 001738 864 FLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA---SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940 (1019)
Q Consensus 864 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~ 940 (1019)
+... . .+..-.|.||+||.+...+. -.++|+|||++++||+.|+..||.+...- +.-++..
T Consensus 339 fsfq-------e----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm-----ecgmkia 402 (448)
T KOG0195|consen 339 FSFQ-------E----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM-----ECGMKIA 402 (448)
T ss_pred eeee-------c----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch-----hhhhhhh
Confidence 2110 1 12234789999999987764 35799999999999999999999764332 1222222
Q ss_pred CcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHHHH
Q 001738 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCAAR 1009 (1019)
Q Consensus 941 ~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~i~ 1009 (1019)
-+.+.--+.|.+ ..-+.+++.-|+..||.+|| .++.|+-.|+++.
T Consensus 403 leglrv~ippgi-----------------------s~hm~klm~icmnedpgkrp-kfdmivpilekm~ 447 (448)
T KOG0195|consen 403 LEGLRVHIPPGI-----------------------SRHMNKLMNICMNEDPGKRP-KFDMIVPILEKMI 447 (448)
T ss_pred hccccccCCCCc-----------------------cHHHHHHHHHHhcCCCCcCC-CcceehhhHHHhc
Confidence 222222233222 33457888899999999999 9999988887653
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=9e-22 Score=234.92 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=136.3
Q ss_pred ccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceecc
Q 001738 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252 (1019)
Q Consensus 173 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 252 (1019)
+...|++++++++ .+|..+. +.|+.|+|++|+++ .+|..+. ++|++|++++|+|+ .+|..+. ++|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 3567777777777 5666554 36777777777777 4565543 46777777777776 4565443 356777777
Q ss_pred CCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCC
Q 001738 253 GNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNG 332 (1019)
Q Consensus 253 ~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 332 (1019)
+|.+. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|+|++|+|++ +|..+.
T Consensus 250 ~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp------------------ 303 (754)
T PRK15370 250 INRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP------------------ 303 (754)
T ss_pred CCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch------------------
Confidence 77665 5555433 24555555555555 2344332 245555555555442 222111
Q ss_pred CCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeecccccCCCC
Q 001738 333 AANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412 (1019)
Q Consensus 333 ~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 412 (1019)
++|+.|++++|+++. +|..+ .++|+.|++++|.+++ +
T Consensus 304 --------------~sL~~L~Ls~N~Lt~--------------------------LP~~l--~~sL~~L~Ls~N~Lt~-L 340 (754)
T PRK15370 304 --------------SGITHLNVQSNSLTA--------------------------LPETL--PPGLKTLEAGENALTS-L 340 (754)
T ss_pred --------------hhHHHHHhcCCcccc--------------------------CCccc--cccceeccccCCcccc-C
Confidence 234444444444431 11111 1345556666666653 4
Q ss_pred chhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhcc
Q 001738 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNIT 492 (1019)
Q Consensus 413 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 492 (1019)
|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. .+|+.|++++|+|+ .+|..+
T Consensus 341 P~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl---- 407 (754)
T PRK15370 341 PASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESL---- 407 (754)
T ss_pred Chhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhH----
Confidence 44442 46666777776666 4554442 46666666666666 3454433 24666666666665 444432
Q ss_pred ccccccccCCCcCCCCccccccCCCCCCEEEccCcccC
Q 001738 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530 (1019)
Q Consensus 493 ~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 530 (1019)
|..++.++.+..|+|.+|.++
T Consensus 408 -----------------~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 408 -----------------PHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -----------------HHHhhcCCCccEEEeeCCCcc
Confidence 222333455666666666665
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-22 Score=232.84 Aligned_cols=257 Identities=20% Similarity=0.212 Sum_probs=188.8
Q ss_pred CCCCceeccccEEEEEEEeCCCCEEEEEEEeec----c-cc-hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 707 STSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL----T-RK-GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 707 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~-~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
....++|.|++|.|+.+......+.++.|.+.. . .. .....+..|+-+-..++|||++..+..+.+.. .
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-----~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-----G 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-----c
Confidence 345789999999888888776666666665531 1 11 11122566777778889999987776665552 2
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.+-+||||++ +|..++..... +...++..+++|+..|++|+|+. ||.|||+|++|+++..+|.+||+|||
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~~------~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNGK------LTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred chhhhhcccH-HHHHHHhcccc------cchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 2334999999 99999988632 78888999999999999999999 99999999999999999999999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCC-cchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHh
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASM-AGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~ 939 (1019)
.+....... ........+.+|+..|+|||++.+..|.+ ..||||.|++++.|.+|+.||......+..+.+ ..
T Consensus 466 ~~~vf~~~~---e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~---~~ 539 (601)
T KOG0590|consen 466 AASVFRYPW---EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT---NN 539 (601)
T ss_pred cceeeccCc---chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh---hc
Confidence 997653222 11124556789999999999999999976 589999999999999999999765444332200 00
Q ss_pred CCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 940 ~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
...+..... ....-....+.+...++.++++.||.+|. |+++|++
T Consensus 540 ~~~~~~~~~------------------~~~~~~~~lp~~~~~~~~~~l~~~P~~R~-ti~~i~~ 584 (601)
T KOG0590|consen 540 YSDQRNIFE------------------GPNRLLSLLPRETRIIIYRMLQLDPTKRI-TIEQILN 584 (601)
T ss_pred ccccccccc------------------ChHHHHHhchhhHHHHHHHHccCChhhee-cHHHHhh
Confidence 000000000 00111223455678899999999999999 9999976
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-21 Score=196.49 Aligned_cols=176 Identities=14% Similarity=0.122 Sum_probs=135.0
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhH---H------HHHHHHHHhcCCCCCcceEEEEEec
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK---S------FVAECEALRNIRHRNLIKIITICSS 772 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~h~niv~~~~~~~~ 772 (1019)
..++|++.+++|.|+||.||++.. ++..+|+|++........+ . +.+|++.+.++.||+|..+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 468999999999999999999766 4668999999754332222 2 6899999999999999999988665
Q ss_pred CCCCC---cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC
Q 001738 773 IDSHG---VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849 (1019)
Q Consensus 773 ~~~~~---~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 849 (1019)
..... ....++||||++|.+|.++.. +++ ....+++.+++.+|+. |++|||+||+||+++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 42211 135789999999999988732 333 2456999999999999 999999999999999
Q ss_pred CCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHH
Q 001738 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916 (1019)
Q Consensus 850 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell 916 (1019)
.+| ++++|||......... ....+.....|..++|+||||+++....
T Consensus 170 ~~g-i~liDfg~~~~~~e~~-------------------a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRK-------------------AKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchh-------------------hHHHHHHHhHhcccccccceeEeehHHH
Confidence 988 9999999886432111 0011344556778999999999877553
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=203.28 Aligned_cols=264 Identities=31% Similarity=0.403 Sum_probs=194.9
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch---hhHHHHHHHHHHhcCCCC-CcceEEEEEecCCCCCcceE
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG---AFKSFVAECEALRNIRHR-NLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 781 (1019)
|.+.+.||.|+||.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++... ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE-----GSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC-----CEE
Confidence 677889999999999999986 78999998754332 367789999999999988 799999998544 447
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC-CeEEeeec
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-VAHVGDFG 860 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg 860 (1019)
+++++++.++++.+++...... ..++......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777765421 2388999999999999999999999 999999999999999988 79999999
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccC---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC--cccHHHH
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG---SEASMAGDVYSFGILLLEMFIRKRPTDSMFND--GLTIHEF 935 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~--~~~~~~~ 935 (1019)
.++........... ........|+..|+|||...+ ..+....|+||+|++++++++|..||...... .....+.
T Consensus 148 ~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 226 (384)
T COG0515 148 LAKLLPDPGSTSSI-PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI 226 (384)
T ss_pred cceecCCCCccccc-cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHH
Confidence 99854332211000 013356789999999999987 57899999999999999999999997653321 1111111
Q ss_pred HHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHH
Q 001738 936 AMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004 (1019)
Q Consensus 936 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~ 1004 (1019)
....... ...... ..... ......+.+++..|+..+|..|. ++.+....
T Consensus 227 ~~~~~~~----~~~~~~-------------~~~~~--~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~ 275 (384)
T COG0515 227 ILELPTP----SLASPL-------------SPSNP--ELISKAASDLLKKLLAKDPKNRL-SSSSDLSH 275 (384)
T ss_pred HHhcCCc----cccccc-------------Ccccc--chhhHHHHHHHHHHHhcCchhcC-CHHHHhhc
Confidence 1111111 000000 00000 12234578888999999999999 77666553
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-20 Score=187.82 Aligned_cols=139 Identities=17% Similarity=0.126 Sum_probs=108.2
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccch--h------------------------hHHHHHHHHHHhcCCCCC
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG--A------------------------FKSFVAECEALRNIRHRN 762 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~n 762 (1019)
...||+|+||.||+|.+. +|+.||||+++..... . ......|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999754211 0 012245999999998877
Q ss_pred cceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeecc
Q 001738 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDL 841 (1019)
Q Consensus 763 iv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~ivH~Dl 841 (1019)
+.....+.. ...++||||++|+++........ .+++..+..++.|++.+|+|+ |+. ||+||||
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~~------~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKDA------PLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhcC------CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 644333221 12379999999887765433222 288999999999999999999 688 9999999
Q ss_pred CCCceEeCCCCCeEEeeeccceec
Q 001738 842 KPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 842 kp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
||+||+++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 578999999999743
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-19 Score=180.84 Aligned_cols=138 Identities=21% Similarity=0.202 Sum_probs=109.9
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccchh--------------------------hHHHHHHHHHHhcCCCCC
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--------------------------FKSFVAECEALRNIRHRN 762 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 762 (1019)
.+.||+|+||.||+|++. +|+.||||+++...... ...+..|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 568999999999999987 89999999997542110 122357899999999998
Q ss_pred cceEEEEEecCCCCCcceEEEEEeeccCCCHHHH-HhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeec
Q 001738 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEW-LHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGD 840 (1019)
Q Consensus 763 iv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~D 840 (1019)
+.....+... ..++||||++|+++... +... .++..+...++.|++.++.++|+ . ||+|||
T Consensus 81 i~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILLK-------KNVLVMEFIGDDGSPAPRLKDV-------PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEec-------CCEEEEEEecCCCchhhhhhhc-------cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 7544443322 23799999998865433 3322 27788899999999999999999 8 999999
Q ss_pred cCCCceEeCCCCCeEEeeeccceec
Q 001738 841 LKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 841 lkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
|||+||+++ ++.++|+|||+|...
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceec
Confidence 999999998 889999999999864
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-19 Score=177.30 Aligned_cols=190 Identities=16% Similarity=0.077 Sum_probs=138.4
Q ss_pred CCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch----hhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceE
Q 001738 707 STSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG----AFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 707 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
.+...|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++|+++. |+++++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4567899999999998776 5788888877643321 1235789999999995 5889999885 235
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecc-CCCceEeCCCCCeEEeeec
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDL-KPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kL~Dfg 860 (1019)
+++|||++|.+|.+.... ....++.|++.+++++|++ ||+|||| ||+||+++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 899999999998654321 1134778999999999999 9999999 7999999999999999999
Q ss_pred cceeccccCC-------CCCCCCCcccccccCCcccCcccccC--CCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 861 LAKFLYTCQV-------DDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 861 ~a~~~~~~~~-------~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
+|........ .+.. .........++.|++|+...- ..--...+.++-|+-+|.++||+.|+-+
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~-~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLR-HLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CceecCCcchHHHHHHHHHHH-HHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 9985432110 0000 000111235777888875322 2223567999999999999999998754
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-19 Score=187.46 Aligned_cols=240 Identities=21% Similarity=0.287 Sum_probs=151.0
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeeccc---chhhHHHHHHHHHHhcCCC----------CCcceEEEEEe
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKSFVAECEALRNIRH----------RNLIKIITICS 771 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~ 771 (1019)
.+...+.||.|+++.||.+++.++++++|+|++.... ....+++++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455678999999999999999999999999986433 2345667777655555322 12222222222
Q ss_pred cCCCC-------Ccc-----eEEEEEeeccCCCHHHHHhc---cCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 001738 772 SIDSH-------GVD-----FKALVYEYMQNGSLEEWLHH---SNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPI 836 (1019)
Q Consensus 772 ~~~~~-------~~~-----~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 836 (1019)
....+ +.. ..+++|+-+ .++|.+++.. .... ...+....+..+..|+++.+++||+. |+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl 166 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHSY---GL 166 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence 11100 001 346788877 5688887653 2211 12244556677789999999999999 99
Q ss_pred EeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccC--------CCCCCcchHHHH
Q 001738 837 IHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--------SEASMAGDVYSF 908 (1019)
Q Consensus 837 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSl 908 (1019)
||+||+|+|++++.+|.++|+||+........ ......+..|.|||.... -.++.+.|.|++
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----------~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR----------YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTEE----------EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCce----------eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 99999999999999999999999987653211 111244678999997543 247889999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccC
Q 001738 909 GILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSM 988 (1019)
Q Consensus 909 Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~ 988 (1019)
|+++|.|++|..||......... +. ++ ..|. ..++.+.+++..+++
T Consensus 237 G~~ly~lWC~~lPf~~~~~~~~~------------------~~---~f------~~C~-------~~Pe~v~~LI~~lL~ 282 (288)
T PF14531_consen 237 GITLYSLWCGRLPFGLSSPEADP------------------EW---DF------SRCR-------DMPEPVQFLIRGLLQ 282 (288)
T ss_dssp HHHHHHHHHSS-STCCCGGGSTS------------------GG---GG------TTSS----------HHHHHHHHHHT-
T ss_pred HHHHHHHHHccCCCCCCCccccc------------------cc---cc------hhcC-------CcCHHHHHHHHHHcc
Confidence 99999999999999753221100 00 11 1122 235668899999999
Q ss_pred CCcCch
Q 001738 989 ESPIDR 994 (1019)
Q Consensus 989 ~dP~~R 994 (1019)
++|++|
T Consensus 283 ~~~~~R 288 (288)
T PF14531_consen 283 RNPEDR 288 (288)
T ss_dssp SSGGGS
T ss_pred CCcccC
Confidence 999998
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-21 Score=178.47 Aligned_cols=183 Identities=28% Similarity=0.442 Sum_probs=94.8
Q ss_pred CCCCcCeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchh
Q 001738 394 NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473 (1019)
Q Consensus 394 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 473 (1019)
++.+.+.|.|+.|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4445555555555555 44555555555555555555555 45555555555555555555555 455555555555555
Q ss_pred ccccccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEEeccCccc
Q 001738 474 NVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSF 553 (1019)
Q Consensus 474 ~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 553 (1019)
||+.|++... ..|..|-.++.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+
T Consensus 108 dltynnl~e~------------------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 108 DLTYNNLNEN------------------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred hccccccccc------------------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCch
Confidence 5555555410 12333333444445555555554 4444555555555555555555
Q ss_pred ccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEccCCcCccccCCCCccCCccccccccCCccc
Q 001738 554 RGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLC 626 (1019)
Q Consensus 554 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~N~~~C 626 (1019)
- ..|..++.++.|++|++.+|+++ .+|..++++. + ..+...+.+..|||.-
T Consensus 163 l-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~------l--------------~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 163 L-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLD------L--------------VGNKQVMRMEENPWVN 213 (264)
T ss_pred h-hCcHHHHHHHHHHHHhcccceee-ecChhhhhhh------h--------------hhhHHHHhhhhCCCCC
Confidence 4 44555555555555555555554 3343333221 1 2233556778888863
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-19 Score=210.09 Aligned_cols=197 Identities=23% Similarity=0.274 Sum_probs=157.4
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCC---CCCcceEEEEEecCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR---HRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~ 778 (1019)
....|.|.+.+|+|+||+||+|...+ |+.||+|+-++.... +|.--.+++.+++ -+.|.++...+...
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~----- 766 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQ----- 766 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccC-----
Confidence 34579999999999999999999985 999999998766542 2333344445554 24455555544444
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-------C
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH-------D 851 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------~ 851 (1019)
+.-++|+||.+.|||.+++...+. ++|.-++.+..|+++.+++||.. +||||||||+|.++.. .
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~~------m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNKV------MDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred CcceeeeeccccccHHHhhccCCC------CCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcc
Confidence 446899999999999999995543 89999999999999999999999 9999999999999943 3
Q ss_pred CCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCC
Q 001738 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921 (1019)
Q Consensus 852 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~P 921 (1019)
.-++|+|||.+-.+.--. ......+.++|-.+-.+|+..|+++++++|.|.++.+++-|+.|+.-
T Consensus 838 ~~l~lIDfG~siDm~lfp-----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFP-----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cceEEEecccceeeeEcC-----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 469999999986542111 22344567889999999999999999999999999999999999763
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.7e-20 Score=211.71 Aligned_cols=255 Identities=21% Similarity=0.230 Sum_probs=176.7
Q ss_pred CCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch-hhHHH---HHHHHHHhcCCCCCcceEEEEEecCCCCCcce
Q 001738 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFKSF---VAECEALRNIRHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
+|...+.+|++.|=+|.+|+++ .|. |+||++-+.++. ..+.+ .+|++ ...++|||++++..+.... ..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~-----kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD-----KA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh-----HH
Confidence 6788899999999999999997 454 999998655432 22333 34444 4556899999988775554 56
Q ss_pred EEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeec
Q 001738 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860 (1019)
Q Consensus 781 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 860 (1019)
.|+|-+|+. -+|+|.+....- +...+.+.|+.|++.|+.-+|.. ||+|||||.+|||++.=.-+.|+||.
T Consensus 96 AylvRqyvk-hnLyDRlSTRPF------L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFA 165 (1431)
T KOG1240|consen 96 AYLVRQYVK-HNLYDRLSTRPF------LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFA 165 (1431)
T ss_pred HHHHHHHHh-hhhhhhhccchH------HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccc
Confidence 788889884 499999876543 78888899999999999999999 99999999999999988889999997
Q ss_pred cceeccccCCCCCCCCCcccccccCCcccCcccccCC----------C-CCCcchHHHHHHHHHHHHh-CCCCCCCCCCC
Q 001738 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS----------E-ASMAGDVYSFGILLLEMFI-RKRPTDSMFND 928 (1019)
Q Consensus 861 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~ 928 (1019)
.-+..+-...+.............-..|.|||.+-.. . .+++-||||+||++.|+++ |++||+-.
T Consensus 166 sFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--- 242 (1431)
T KOG1240|consen 166 SFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--- 242 (1431)
T ss_pred ccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---
Confidence 6543321111111111111112234569999975431 2 5788999999999999999 78888521
Q ss_pred cccHHHHHHHhCCcchhhccChhhh-hhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHHHH
Q 001738 929 GLTIHEFAMKALPQRVIEIVDPLLL-LEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKLCA 1007 (1019)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L~~ 1007 (1019)
.+.++ +... -.++... ... ....+..++..|++.||.+|- ++++.++.-++
T Consensus 243 --QL~aY--r~~~-----~~~~e~~Le~I------------------ed~~~Rnlil~Mi~rdPs~Rl-SAedyL~~yrG 294 (1431)
T KOG1240|consen 243 --QLLAY--RSGN-----ADDPEQLLEKI------------------EDVSLRNLILSMIQRDPSKRL-SAEDYLQKYRG 294 (1431)
T ss_pred --HHHhH--hccC-----ccCHHHHHHhC------------------cCccHHHHHHHHHccCchhcc-CHHHHHHhhhc
Confidence 01111 1000 0011000 000 011356788899999999999 99999998655
Q ss_pred H
Q 001738 1008 A 1008 (1019)
Q Consensus 1008 i 1008 (1019)
+
T Consensus 295 ~ 295 (1431)
T KOG1240|consen 295 L 295 (1431)
T ss_pred c
Confidence 4
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-18 Score=175.42 Aligned_cols=140 Identities=15% Similarity=0.203 Sum_probs=110.6
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-----CCCCcceEEEEEecCCCCCcce
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-----RHRNLIKIITICSSIDSHGVDF 780 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~ 780 (1019)
++-.+.||+|+||.||. +..++.. +||++........+.+.+|+.+++.+ .||||+++++++++..+. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~--g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT--GY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC--eE
Confidence 34457899999999995 6656655 69998765454567899999999999 579999999999886433 33
Q ss_pred -EEEEEee--ccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEeeccCCCceEeCC----CC
Q 001738 781 -KALVYEY--MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI-EYLHHHCQPPIIHGDLKPSNVLLDH----DM 852 (1019)
Q Consensus 781 -~~lV~e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~----~~ 852 (1019)
..+|+|| +.+++|.+++++.. +++. ..++.|++.++ +|||++ +||||||||+||+++. ++
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCC
Confidence 3478999 55799999997642 5555 35678888787 999999 9999999999999974 34
Q ss_pred CeEEeeeccc
Q 001738 853 VAHVGDFGLA 862 (1019)
Q Consensus 853 ~~kL~Dfg~a 862 (1019)
+++|+||+.+
T Consensus 147 ~~~LiDg~G~ 156 (210)
T PRK10345 147 IPVVCDNIGE 156 (210)
T ss_pred cEEEEECCCC
Confidence 8999995444
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-18 Score=181.27 Aligned_cols=206 Identities=22% Similarity=0.227 Sum_probs=139.9
Q ss_pred CCCCcceEEEEEecCCC----------------------CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHH
Q 001738 759 RHRNLIKIITICSSIDS----------------------HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816 (1019)
Q Consensus 759 ~h~niv~~~~~~~~~~~----------------------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 816 (1019)
+|||||++.++|.+.-. ......|+||..++ .+|.+++.... .+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-------CchHHHHH
Confidence 59999999987764310 11256889999884 59999998765 56667777
Q ss_pred HHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC--CCC--CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcc
Q 001738 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD--HDM--VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE 892 (1019)
Q Consensus 817 i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 892 (1019)
++.|+++|+.|||.+ ||.|||+|++||++. +|+ ...++|||++---.... ......+.....-|...-||||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG-lqlpy~S~~Vd~GGNa~lmAPE 421 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG-LQLPYESDEVDLGGNAKLMAPE 421 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccc-cccccccccccCCCcceecchh
Confidence 899999999999999 999999999999984 444 57789999874211100 1111112222345778899999
Q ss_pred cccCCC------CCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCC
Q 001738 893 YGMGSE------ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCG 966 (1019)
Q Consensus 893 ~~~~~~------~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~ 966 (1019)
+....+ -..|+|.|+.|.+.||+++...||....+-..+...+....+| .+
T Consensus 422 i~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP---------al-------------- 478 (598)
T KOG4158|consen 422 IATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP---------AL-------------- 478 (598)
T ss_pred hhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC---------CC--------------
Confidence 976542 2458999999999999999999998632221111111111110 00
Q ss_pred CCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHHHH
Q 001738 967 DGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005 (1019)
Q Consensus 967 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~~L 1005 (1019)
.+.++.-+.+++...++.||.+|+ +..-....+
T Consensus 479 -----p~~vpp~~rqlV~~lL~r~pskRv-sp~iAANvl 511 (598)
T KOG4158|consen 479 -----PSRVPPVARQLVFDLLKRDPSKRV-SPNIAANVL 511 (598)
T ss_pred -----cccCChHHHHHHHHHhcCCccccC-CccHHHhHH
Confidence 012233457888889999999999 876554444
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.6e-21 Score=174.09 Aligned_cols=164 Identities=29% Similarity=0.449 Sum_probs=129.4
Q ss_pred hhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccCCcchhhhhccccc
Q 001738 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLS 495 (1019)
Q Consensus 416 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~ 495 (1019)
+.++.+++.|.||+|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++.
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-------------- 92 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-------------- 92 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh--------------
Confidence 345677778888888888 67777888888888888888887 67888888888888888888776
Q ss_pred cccccCCCcCCCCccccccCCCCCCEEEccCcccCC-CCCccccCCCCCcEEeccCcccccCCCcccccccccCeecccc
Q 001738 496 LYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG-EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSS 574 (1019)
Q Consensus 496 ~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 574 (1019)
..|..|+.++.|+.|||++|.+.. .+|..|..++.|+-|+|++|.+. .+|..++++++|+.|.+.+
T Consensus 93 ------------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrd 159 (264)
T KOG0617|consen 93 ------------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRD 159 (264)
T ss_pred ------------cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeecc
Confidence 346677778888888888888763 46777878888888888888887 7788888888888888888
Q ss_pred CcCCCCchhhhcccCccceEEccCCcCccccCCCC
Q 001738 575 NNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKG 609 (1019)
Q Consensus 575 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~ 609 (1019)
|.+- ..|..++.++.|++|.+.+|+++-.+|..+
T Consensus 160 ndll-~lpkeig~lt~lrelhiqgnrl~vlppel~ 193 (264)
T KOG0617|consen 160 NDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELA 193 (264)
T ss_pred Cchh-hCcHHHHHHHHHHHHhcccceeeecChhhh
Confidence 8877 678888888888888888888887777543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-18 Score=191.09 Aligned_cols=218 Identities=28% Similarity=0.423 Sum_probs=162.8
Q ss_pred HhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 001738 755 LRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQP 834 (1019)
Q Consensus 755 l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 834 (1019)
|+.+.|.|+.+++|.+... ...++|.+||..|+|.+.+.... ..+++.....+.++|+.||+|+|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcC---
Confidence 4567899999999999887 66899999999999999998743 2389999999999999999999988
Q ss_pred Ce-EeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCC-------CCCCcchHH
Q 001738 835 PI-IHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-------EASMAGDVY 906 (1019)
Q Consensus 835 ~i-vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvw 906 (1019)
.| .|+.+++.|.++|....+|++|||+........ .........-..-|.|||.+.+. ..+.++|||
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-----~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiY 142 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-----EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIY 142 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhcccccccc-----cccccchhHHHHhccCHHHhcccccccccccccccCCee
Confidence 44 999999999999999999999999987653211 11111122345679999988764 146789999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhc
Q 001738 907 SFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLC 986 (1019)
Q Consensus 907 SlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~C 986 (1019)
|||++++|+++.+.||+........ .+.+..... .....+.|.+ ....+..+.+..++.+|
T Consensus 143 s~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~-~~~~~~rP~i-----------------~~~~e~~~~l~~l~~~c 203 (484)
T KOG1023|consen 143 SFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK-GGSNPFRPSI-----------------ELLNELPPELLLLVARC 203 (484)
T ss_pred hHHHHHHHHHhccCccccccccCCh-HHHHHHHHh-cCCCCcCcch-----------------hhhhhcchHHHHHHHHh
Confidence 9999999999999999864433322 222222111 1111111111 11113445789999999
Q ss_pred cCCCcCchhHhHHHHHHHHHHHHH
Q 001738 987 SMESPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 987 l~~dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
|..+|++|| ++++|-..++.+..
T Consensus 204 w~e~P~~rP-s~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 204 WEEIPEKRP-SIEQIRSKLLTINK 226 (484)
T ss_pred cccChhhCc-cHHHHHhhhhhhcc
Confidence 999999999 99999888876654
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.6e-19 Score=195.86 Aligned_cols=187 Identities=27% Similarity=0.292 Sum_probs=156.3
Q ss_pred ceeccccEEEEEEEe---CCCCEEEEEEEeecccch--hhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCcceEEEE
Q 001738 711 MIGQGSFGFVYRGIL---GEGGLLVAVKVLNLTRKG--AFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGVDFKALV 784 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lV 784 (1019)
.+|+|.||.|++++. .+.|..+|+|+.++.... .......|..++...+ ||.++++...++.. ...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~-----~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD-----GKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc-----cchhHh
Confidence 379999999997654 345778999998644221 1125567888888887 99999998888776 667899
Q ss_pred EeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 785 YEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 785 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
++|..||.+...+..... +++.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||.++.
T Consensus 76 ld~~rgg~lft~l~~~~~------f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEVM------FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccCCc------hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 999999999988877654 78888888999999999999999 999999999999999999999999999986
Q ss_pred ccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 001738 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924 (1019)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~ 924 (1019)
.-... ..+||..|||||++. ....++|.||||++.+||++|..||..
T Consensus 147 ~v~~~-----------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 147 AVKEK-----------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhhh-----------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 53221 118999999999988 567889999999999999999999965
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.4e-20 Score=203.83 Aligned_cols=88 Identities=25% Similarity=0.310 Sum_probs=43.5
Q ss_pred ccCCCCCCEEEccCcccCCCCCcccc-----CCCCCcEEeccCccccc----CCCcccccccccCeeccccCcCCCC---
Q 001738 513 VGNLQNLVELDISRNQVSGEIPATLS-----ACTSLEYLNLSYNSFRG----GIPLSLSSLKSVKVLDLSSNNLSGQ--- 580 (1019)
Q Consensus 513 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~--- 580 (1019)
+..+++|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+.+++++|.++..
T Consensus 217 ~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~ 296 (319)
T cd00116 217 LASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQ 296 (319)
T ss_pred hcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHH
Confidence 34445566666666665532222221 12456666666666541 1223344445666666666666533
Q ss_pred -chhhhccc-CccceEEccCCc
Q 001738 581 -IPKYLENL-SFLEYLNISSNH 600 (1019)
Q Consensus 581 -~p~~l~~l-~~L~~L~l~~N~ 600 (1019)
....+... +.|+++++.+|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 297 LLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHhhcCCchhhcccCCCC
Confidence 23333333 455555555554
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=173.46 Aligned_cols=141 Identities=19% Similarity=0.159 Sum_probs=111.0
Q ss_pred CCCCCCceeccccEEEEEEE-eCCCCEEEEEEEeecccch------------------------hhHHHHHHHHHHhcCC
Q 001738 705 EFSTSNMIGQGSFGFVYRGI-LGEGGLLVAVKVLNLTRKG------------------------AFKSFVAECEALRNIR 759 (1019)
Q Consensus 705 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 759 (1019)
-|++.+.||+|+||.||+|. +..+|+.||+|+++..... ....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58889999999999999998 6668999999998743210 1123568999999997
Q ss_pred CC--CcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCC-e
Q 001738 760 HR--NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPP-I 836 (1019)
Q Consensus 760 h~--niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-i 836 (1019)
+. .+.+++++ ...++||||++|+++........ .+...++..++.|++.++++||+. | |
T Consensus 109 ~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 109 EAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred hcCCCCCeeeEe---------cCceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 53 34444432 12379999999988876543222 255666788999999999999999 9 9
Q ss_pred EeeccCCCceEeCCCCCeEEeeecccee
Q 001738 837 IHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 837 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
+||||||+||+++ ++.++|+|||.|..
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhc
Confidence 9999999999999 88999999999874
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-18 Score=187.95 Aligned_cols=181 Identities=28% Similarity=0.385 Sum_probs=134.1
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
.+.||.|++|+..+|.+|+...+. ....++.....++.|++.|++| + +.+|+|+||.||+...+..+||.|
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~---~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRT---GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCc---ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 468899999999999999986553 3346888899999999999999 6 999999999999999999999999
Q ss_pred eccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 001738 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI-RKRPTDSMFNDGLTIHEFAM 937 (1019)
Q Consensus 859 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~ 937 (1019)
||+........ .........+...||..||+||.+.+..|+.++||||||++++|++. =..+|+. ...+.+.
T Consensus 400 Fgl~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t~~d~-- 472 (516)
T KOG1033|consen 400 FGLVTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----IATLTDI-- 472 (516)
T ss_pred hhheeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----HHhhhhh--
Confidence 99987654433 11222334556789999999999999999999999999999999997 2222221 0001100
Q ss_pred HhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHH
Q 001738 938 KALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVV 1002 (1019)
Q Consensus 938 ~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl 1002 (1019)
-...++|....++ | .=..++.+++...|.+|| ++.++.
T Consensus 473 ------r~g~ip~~~~~d~-------p-------------~e~~ll~~lls~~p~~RP-~~~~~~ 510 (516)
T KOG1033|consen 473 ------RDGIIPPEFLQDY-------P-------------EEYTLLQQLLSPSPEERP-SAIEVA 510 (516)
T ss_pred ------hcCCCChHHhhcC-------c-------------HHHHHHHHhcCCCcccCc-hHHHHh
Confidence 0112222222222 0 115788899999999999 776653
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-19 Score=201.21 Aligned_cols=256 Identities=21% Similarity=0.190 Sum_probs=123.4
Q ss_pred ccceeecccccccC----CCCccccCccccceeeeccccccc------CCCccccCccccceeeccccccCCCCCCcccc
Q 001738 173 RLEKLSIADNHLTG----QLPASIGNLSVLKVINVEENRLSG------RIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYN 242 (1019)
Q Consensus 173 ~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~n~l~~------~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~ 242 (1019)
+|++|+++++.++. .++..+...+.|++|+++++.+.+ .++..+..+++|+.|++++|.+.+..+..+..
T Consensus 24 ~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 24 CLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred hccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHH
Confidence 46666666666533 244455556666777776666552 22334555666666666666665444444444
Q ss_pred ccc---ccceeccCCcccCCCCccc---cccc-cccceEEecccccCCC----CCCcccCCCcCCeEecCCCcCCCCC--
Q 001738 243 LSS---LELLYLRGNRLIGSLPIDI---GLTL-PKLTNFVIAENNFSGP----IPNSFSNTSNLVMLDLNLNLFSGKV-- 309 (1019)
Q Consensus 243 l~~---L~~L~L~~N~l~~~lp~~~---~~~l-~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-- 309 (1019)
+.+ |++|++++|++.+.-...+ ...+ ++|+.|++++|.+++. ++..+..+++|++|++++|.+++..
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 444 6666666666542111000 0122 4445555555554421 1223334444555555555544211
Q ss_pred --CcccccccCcccccccCccCCCCCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCcccccc
Q 001738 310 --PINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGT 387 (1019)
Q Consensus 310 --p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~ 387 (1019)
+..+..+++|++|++++|.+ ++.... .
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i------------------------------~~~~~~---------------------~ 212 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGL------------------------------TDEGAS---------------------A 212 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCcc------------------------------ChHHHH---------------------H
Confidence 11122223344444443333 211100 1
Q ss_pred CcccccCCCCcCeEeecccccCCCCchhhhc-----ccccceeecccccccC----ccccccCCCCcccEEEccCccccc
Q 001738 388 IPSGIGNLVNLNGFGIDLNQLTGTIPHEIGK-----LTNLQLLYLDFNLLEG----SIPFSLGNLTLLTELELQSNYLQG 458 (1019)
Q Consensus 388 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~ 458 (1019)
++..+..+++|++|++++|.+++.....+.. .++|+.|++++|.++. .+...+..+++|+++++++|.++.
T Consensus 213 l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 213 LAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1223444556666666666666433333322 2566666776666651 223344455666677777766663
Q ss_pred c----cCCCcccc-cccchhcccccc
Q 001738 459 N----IPSSLGNC-RSLLSLNVSQNK 479 (1019)
Q Consensus 459 ~----~p~~~~~l-~~L~~L~L~~N~ 479 (1019)
. ....+... +.|++|++.+|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 293 EGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HHHHHHHHHHhhcCCchhhcccCCCC
Confidence 3 22233333 456666665554
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-17 Score=197.63 Aligned_cols=154 Identities=31% Similarity=0.506 Sum_probs=125.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC----cceeeeeCCC--C--CeeeEEeeeccCCCCccccCcCCCc
Q 001738 28 GVPSNETDRLALLAIKSQLHDPLGVTSSWNNSINLC----QWTGVTCGHR--H--QRVTKLYLRNQSIGGILSPHVGNLS 99 (1019)
Q Consensus 28 ~~~~~~~~~~all~~k~~~~~~~~~~~sW~~~~~~c----~w~gv~C~~~--~--~~v~~l~l~~~~l~~~~~~~l~~l~ 99 (1019)
..++.+.|..||++||+++.+|.. .+|+++ .|| .|.||+|+.. . .+|+.|+|+++++.|.+|+.++.|+
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~~~~--~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGLPLR--FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred ccccCchHHHHHHHHHHhcCCccc--CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 335567899999999999977643 489643 443 7999999532 2 3699999999999999999999999
Q ss_pred ccceeccCCCccCCCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhhccccccccccccccccccccceeec
Q 001738 100 FLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSI 179 (1019)
Q Consensus 100 ~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~~L~l 179 (1019)
+|+.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..+++|++ |++|+|
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~-------------------------L~~L~L 497 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS-------------------------LRILNL 497 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCC-------------------------CCEEEC
Confidence 9999999999999999999999999999999999999999999988765 566666
Q ss_pred ccccccCCCCccccCc-cccceeeecccccc
Q 001738 180 ADNHLTGQLPASIGNL-SVLKVINVEENRLS 209 (1019)
Q Consensus 180 ~~n~l~~~~p~~~~~l-~~L~~L~l~~n~l~ 209 (1019)
++|+++|.+|..++.+ .++..+++.+|...
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccc
Confidence 6666666666666543 34566677776543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-17 Score=193.64 Aligned_cols=172 Identities=28% Similarity=0.392 Sum_probs=125.4
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
..+|..++.|..|+||.||.++++.+.+.+|+|+=+.. .+++ ||..+. +..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------------lilR-----nilt~a-----------~npf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------------LILR-----NILTFA-----------GNPF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccc------------hhhh-----cccccc-----------CCcc
Confidence 46899999999999999999999989999999543211 0111 122111 1112
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
.| |+-.+.++..+. ++. +++.+++|+|+. ||||||+||+|.+|+.-|++|++|||++
T Consensus 134 vv------gDc~tllk~~g~------lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 134 VV------GDCATLLKNIGP------LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred ee------chhhhhcccCCC------Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 22 444555554432 222 227889999999 9999999999999999999999999999
Q ss_pred eeccccC--------CCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 001738 863 KFLYTCQ--------VDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925 (1019)
Q Consensus 863 ~~~~~~~--------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~~~ 925 (1019)
+...... ............++||+.|+|||++....|+..+|.|++|+|+||.+.|..||.+.
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence 7542211 11111111223468999999999999999999999999999999999999999763
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.1e-16 Score=161.21 Aligned_cols=134 Identities=24% Similarity=0.327 Sum_probs=110.7
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccc--------hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--------GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
+.||+|++|.||+|.+ .|..|++|+...... .....+.+|+.++..+.|+++.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999988 577899998653221 1124577899999999999887766665544 456
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
++||||++|++|.+++.... + .+..++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 89999999999999986432 2 7788999999999999999 999999999999999 78999999998
Q ss_pred cee
Q 001738 862 AKF 864 (1019)
Q Consensus 862 a~~ 864 (1019)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 863
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=179.76 Aligned_cols=138 Identities=23% Similarity=0.291 Sum_probs=110.2
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc--c------chhhHHHHHHHHHHhcCCCCCcceEEEEEecC
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--R------KGAFKSFVAECEALRNIRHRNLIKIITICSSI 773 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 773 (1019)
....|...+.||+|+||+||+|.+. +..+++|+.... . ....+++.+|++++++++|++++....++...
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 3445677899999999999999885 334555543211 1 11235688999999999999998877666554
Q ss_pred CCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC
Q 001738 774 DSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV 853 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 853 (1019)
...++||||++|++|.+++. ....++.|++++++|||+. +++|||+||+||++ .++.
T Consensus 409 -----~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~ 465 (535)
T PRK09605 409 -----EEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDR 465 (535)
T ss_pred -----CCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCc
Confidence 34689999999999998875 2356899999999999999 99999999999999 6789
Q ss_pred eEEeeecccee
Q 001738 854 AHVGDFGLAKF 864 (1019)
Q Consensus 854 ~kL~Dfg~a~~ 864 (1019)
++|+|||+++.
T Consensus 466 ~~liDFGla~~ 476 (535)
T PRK09605 466 LYLIDFGLGKY 476 (535)
T ss_pred EEEEeCccccc
Confidence 99999999974
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-15 Score=157.44 Aligned_cols=142 Identities=27% Similarity=0.216 Sum_probs=109.7
Q ss_pred HHHHhhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch----------------------hhHHHHHHHHHH
Q 001738 698 ELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG----------------------AFKSFVAECEAL 755 (1019)
Q Consensus 698 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l 755 (1019)
++......|.+.+.||+|+||.||+|.+. +|+.||||+++..... .......|+.++
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 33333334888899999999999999886 7999999997643210 112356788889
Q ss_pred hcCCCCC--cceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 001738 756 RNIRHRN--LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQ 833 (1019)
Q Consensus 756 ~~l~h~n--iv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 833 (1019)
..+.|++ +++.++. ...++||||++|++|...... .....++.+++.++.++|+.
T Consensus 88 ~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~-- 144 (198)
T cd05144 88 KALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH-- 144 (198)
T ss_pred HHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC--
Confidence 8887773 4444432 234899999999998765321 23456889999999999999
Q ss_pred CCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 834 PPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 834 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
||+||||||+||++++++.++|+|||.+..
T Consensus 145 -gi~H~Dl~p~Nill~~~~~~~liDfg~~~~ 174 (198)
T cd05144 145 -GIIHGDLSEFNILVDDDEKIYIIDWPQMVS 174 (198)
T ss_pred -CCCcCCCCcccEEEcCCCcEEEEECCcccc
Confidence 999999999999999999999999999964
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.8e-16 Score=158.39 Aligned_cols=130 Identities=25% Similarity=0.347 Sum_probs=103.7
Q ss_pred ceeccccEEEEEEEeCCCCEEEEEEEeecccc--------hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEE
Q 001738 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--------GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA 782 (1019)
Q Consensus 711 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 782 (1019)
.||+|+||.||+|.+ ++..|++|+...... ....++.+|++++..++|+++.....++... ...+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence 489999999999996 578899998653211 1135677899999999887654444444333 3458
Q ss_pred EEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 783 LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 783 lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
+||||++|++|.+++.... . .++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.+
T Consensus 74 lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999998875432 1 6899999999999999 999999999999999 889999999998
Q ss_pred ee
Q 001738 863 KF 864 (1019)
Q Consensus 863 ~~ 864 (1019)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 64
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=142.50 Aligned_cols=135 Identities=21% Similarity=0.228 Sum_probs=111.5
Q ss_pred CCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCC--CCcceEEEEEecCCCCCcceEEEEE
Q 001738 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRH--RNLIKIITICSSIDSHGVDFKALVY 785 (1019)
Q Consensus 708 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lV~ 785 (1019)
+.+.+|+|.++.||++... +..+++|....... ...+.+|+.+++.++| .++++++.+.... +..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-----~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD-----GWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----CccEEEE
Confidence 4578999999999999985 47899999865433 4678899999999976 5888888877654 5679999
Q ss_pred eeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecccee
Q 001738 786 EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 786 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 864 (1019)
||++++.+..+ +......++.+++++++++|.....+++|||++|+||+++.++.++++|||.+..
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99988766543 3456677899999999999986444799999999999999989999999998863
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-14 Score=146.51 Aligned_cols=135 Identities=25% Similarity=0.267 Sum_probs=97.1
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccch--hhHH----------------------HHHHHHHHhcCCCC--C
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG--AFKS----------------------FVAECEALRNIRHR--N 762 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~--n 762 (1019)
.+.||+|+||+||+|.+. +++.||||+++..... .... ...|.+.+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 568999999999999987 7899999998753211 1111 13456666665433 2
Q ss_pred cceEEEEEecCCCCCcceEEEEEeeccCCCHHHH-HhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeec
Q 001738 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEW-LHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH-HCQPPIIHGD 840 (1019)
Q Consensus 763 iv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~D 840 (1019)
+.+.+++ ...++||||++++++... +.... .. .+...++.+++.++.++|. . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4444442 235899999998543211 11110 11 5567899999999999999 7 999999
Q ss_pred cCCCceEeCCCCCeEEeeeccceec
Q 001738 841 LKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 841 lkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
|||+||+++ ++.++++|||.|...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 899999999999743
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.9e-14 Score=148.11 Aligned_cols=138 Identities=19% Similarity=0.140 Sum_probs=106.1
Q ss_pred Ccee-ccccEEEEEEEeCCCCEEEEEEEeeccc-------------chhhHHHHHHHHHHhcCCCCCc--ceEEEEEecC
Q 001738 710 NMIG-QGSFGFVYRGILGEGGLLVAVKVLNLTR-------------KGAFKSFVAECEALRNIRHRNL--IKIITICSSI 773 (1019)
Q Consensus 710 ~~lg-~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~ 773 (1019)
..|| .||.|+||.+... +..+|||.+.... ......+.+|++++.++.|+++ ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4687 8888999999874 7789999885311 1223567889999999988775 6677764433
Q ss_pred CCCCcceEEEEEeeccC-CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC
Q 001738 774 DSHGVDFKALVYEYMQN-GSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM 852 (1019)
Q Consensus 774 ~~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 852 (1019)
.. .....++||||++| .+|.+++.... ++.. .+.+++.++.+||++ ||+||||||.|||++.++
T Consensus 115 ~~-~~~~~~lV~e~l~G~~~L~~~l~~~~-------l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 HG-LFYRADILIERIEGARDLVALLQEAP-------LSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred cC-cceeeeEEEEecCCCCCHHHHHhcCC-------CCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 21 11234699999997 69999886532 4443 356899999999999 999999999999999999
Q ss_pred CeEEeeecccee
Q 001738 853 VAHVGDFGLAKF 864 (1019)
Q Consensus 853 ~~kL~Dfg~a~~ 864 (1019)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998874
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.9e-16 Score=181.45 Aligned_cols=258 Identities=22% Similarity=0.230 Sum_probs=187.7
Q ss_pred hCCCCCCCceeccccEEEEEEEeC-CCCEEEEEEEeeccc--chhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCCc
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILG-EGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 778 (1019)
...|.+.+.||+|+|+.|-.+... .....+|+|.+.... ....+....|..+-+.+. |+|++++++.....
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~----- 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP----- 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC-----
Confidence 346788888999999999888764 234566777665432 333445566888888886 99999999987766
Q ss_pred ceEEEEEeeccCCCHHHHHh-ccCCCCCccCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEeeccCCCceEeCCCC-CeE
Q 001738 779 DFKALVYEYMQNGSLEEWLH-HSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDM-VAH 855 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~-~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~k 855 (1019)
+..++++||.+|+++.+.+. ... ...+....-.++.|+..++.|+| .. +++|+|+||+|.+++..+ ..+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred cccccccCcccccccccccccCCc-----cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 67899999999999988873 322 12566667779999999999999 87 999999999999999999 999
Q ss_pred EeeeccceeccccCCCCCCCCCccccccc-CCcccCcccccCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 001738 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKG-TVGYVAPEYGMGS-EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933 (1019)
Q Consensus 856 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwSlGvil~ell~g~~Pf~~~~~~~~~~~ 933 (1019)
+.|||+|..+..- ..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+...........
T Consensus 166 ~~df~~At~~~~~----~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~ 241 (601)
T KOG0590|consen 166 IADFGLATAYRNK----NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS 241 (601)
T ss_pred CCCchhhcccccc----CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce
Confidence 9999999876441 112333344567 9999999998884 457889999999999999999999976544433322
Q ss_pred HHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCCCcCchhHhHHHHHH
Q 001738 934 EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVA 1003 (1019)
Q Consensus 934 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP~s~~evl~ 1003 (1019)
.+...... . ....+ ........++..+++..+|..|. +.+++..
T Consensus 242 ~~~~~~~~--~----~~~~~-------------------~~~~~~~~~~l~k~l~~~~~~r~-s~~~~~~ 285 (601)
T KOG0590|consen 242 SWKSNKGR--F----TQLPW-------------------NSISDQAHDLLHKILKENPSNRL-SIEELKL 285 (601)
T ss_pred eecccccc--c----ccCcc-------------------ccCChhhhhcccccccCCchhcc-ccccccc
Confidence 22221100 0 00000 01122346777788889999999 8877643
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.7e-14 Score=170.94 Aligned_cols=144 Identities=35% Similarity=0.562 Sum_probs=114.1
Q ss_pred CCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEcc
Q 001738 518 NLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNIS 597 (1019)
Q Consensus 518 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 597 (1019)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|||++|+++|.+|..+..+++|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCccccCCC--CccCCccccccccCCcccCCcccCCCCCCCCCCCCcccceeEEeeehhhHHHHHHHHHH
Q 001738 598 SNHFEGKVPTK--GVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILLGCF 667 (1019)
Q Consensus 598 ~N~l~~~~p~~--~~~~~~~~~~~~~N~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~i~~~il~~~~ 667 (1019)
+|+++|.+|.. ..+.++..+++.+|+.+|+.+. .+.|.... +...++.+++++++++++++++.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~~~~---~~~~~i~~~~~~~~~~l~~~~~~ 564 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACGPHL---SVGAKIGIAFGVSVAFLFLVICA 564 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCcccC---CCceEEEEEhHHHHHHHHHHHHH
Confidence 99999999864 2234456788999999999653 35675322 23334445555554443333333
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-15 Score=163.64 Aligned_cols=197 Identities=26% Similarity=0.436 Sum_probs=158.3
Q ss_pred CCCcccceeccCCCccCCCCCcccCCCCCcceecccCccccCCCCccccCCcchhhhhhccccccccccccccccccccc
Q 001738 96 GNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLE 175 (1019)
Q Consensus 96 ~~l~~L~~L~L~~n~~~g~~p~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L~ 175 (1019)
-.|+.-...||+.|++. ++|.++..+..|+.|.|.+|.+. .||..++++.. |+
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~-------------------------lt 124 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEA-------------------------LT 124 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhH-------------------------HH
Confidence 34666677889999988 88888888888999999999888 78888877654 66
Q ss_pred eeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceeccCCc
Q 001738 176 KLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNR 255 (1019)
Q Consensus 176 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 255 (1019)
+|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++.+.+|+.|.+..|+
T Consensus 125 ~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~ 200 (722)
T KOG0532|consen 125 FLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNH 200 (722)
T ss_pred Hhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhh
Confidence 7777777777 7888888877 888888999888 78888888888888999999888 788888888899999999998
Q ss_pred ccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCccccc---ccCcccccccCcc
Q 001738 256 LIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSR---LQNLSWLLLAGNN 328 (1019)
Q Consensus 256 l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~---l~~L~~L~L~~N~ 328 (1019)
+. .+|.++. . -.|..|+++.|+++ .+|-.|.+|+.|++|-|.+|.+. ..|..++. ..--++|+...++
T Consensus 201 l~-~lp~El~-~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 201 LE-DLPEELC-S-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred hh-hCCHHHh-C-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 87 7787776 3 35778888888888 68888999999999999999998 46665543 2334567666664
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.2e-15 Score=162.64 Aligned_cols=188 Identities=29% Similarity=0.492 Sum_probs=105.3
Q ss_pred EeccCccccccCcccccCCCCcCeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCccc
Q 001738 377 INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYL 456 (1019)
Q Consensus 377 L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 456 (1019)
.+++.|++. .+|..+..+..|+.+.|..|.+. .+|..++++..|++|||+.|+++ ..|..++.|+ |+.|.+++|++
T Consensus 80 aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 80 ADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 444555544 44555555555555555555555 45555555555555555555555 4555555444 55555555555
Q ss_pred ccccCCCcccccccchhccccccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCcc
Q 001738 457 QGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPAT 536 (1019)
Q Consensus 457 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 536 (1019)
+ .+|..++.+..|..||.+.|.+. . +|..++++.+|+.|.+..|++. .+|+.
T Consensus 156 ~-~lp~~ig~~~tl~~ld~s~nei~-s-------------------------lpsql~~l~slr~l~vrRn~l~-~lp~E 207 (722)
T KOG0532|consen 156 T-SLPEEIGLLPTLAHLDVSKNEIQ-S-------------------------LPSQLGYLTSLRDLNVRRNHLE-DLPEE 207 (722)
T ss_pred c-cCCcccccchhHHHhhhhhhhhh-h-------------------------chHHhhhHHHHHHHHHhhhhhh-hCCHH
Confidence 4 45555555555555555555554 2 3455556666666666666665 45555
Q ss_pred ccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhccc---CccceEEccCC
Q 001738 537 LSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENL---SFLEYLNISSN 599 (1019)
Q Consensus 537 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~l~~N 599 (1019)
+..| .|..||+|.|+++ .+|-.|.+|+.|++|-|.+|.|+ ..|..+... .-.++|+..-+
T Consensus 208 l~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 208 LCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred HhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 5533 4666666666666 66666666666777767666666 445444322 22455555544
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.9e-13 Score=149.49 Aligned_cols=202 Identities=25% Similarity=0.286 Sum_probs=158.0
Q ss_pred CCCCCCceec--cccEEEEEEEe--CCCCEEEEEEEee--cccchhhHHHHHHHHHHhcCC-CCCcceEEEEEecCCCCC
Q 001738 705 EFSTSNMIGQ--GSFGFVYRGIL--GEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIR-HRNLIKIITICSSIDSHG 777 (1019)
Q Consensus 705 ~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 777 (1019)
.|-+.+.+|. |.+|.||.+.. ..++..+|+|.-+ ...+....+-.+|+...++++ |++.++.+..+...
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~---- 190 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS---- 190 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC----
Confidence 4566788999 99999999998 8889999999843 222233344467777777774 99999976666555
Q ss_pred cceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEeeccCCCceEeCCC-C
Q 001738 778 VDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHD-M 852 (1019)
Q Consensus 778 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~ 852 (1019)
+..++-+|++ +.++.++...... .++...++.+..+... |+.++|+. +++|-|+||.||+...+ .
T Consensus 191 -~~lfiqtE~~-~~sl~~~~~~~~~-----~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 191 -GILFIQTELC-GESLQSYCHTPCN-----FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred -Ccceeeeccc-cchhHHhhhcccc-----cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccc
Confidence 6788999988 5788888766442 2677788888888888 99999999 99999999999999999 8
Q ss_pred CeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 001738 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923 (1019)
Q Consensus 853 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~Pf~ 923 (1019)
..+++|||+...+......... .......|...|++||...+ -++..+|+|++|.++.+..++..++.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~--~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVF--KVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred eeecCCcceeEEccCCccccce--eeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhccccc
Confidence 8999999999877554422211 11223367889999999765 78899999999999999999887654
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.3e-14 Score=142.03 Aligned_cols=162 Identities=25% Similarity=0.397 Sum_probs=122.7
Q ss_pred HHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 001738 754 ALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQ 833 (1019)
Q Consensus 754 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 833 (1019)
-+-++.|.|+|++..|+.+..........+++|||..|++.+++++.+... ..+......+|+-||..||.|||+. .
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~--~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ--KALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh--hhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 344557999999999998876655567889999999999999998865432 3378888899999999999999997 7
Q ss_pred CCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHH
Q 001738 834 PPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLL 913 (1019)
Q Consensus 834 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ 913 (1019)
|.|+|+++.-+-|++..+|-+|+.--.-......-. .. .........+-++|.|||.-.....+.++|||+||+...
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~--~~-~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVN--ST-REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL 273 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhh--hh-hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence 899999999999999999988884221111110000 00 000111234678999999977777888999999999999
Q ss_pred HHHhCCCC
Q 001738 914 EMFIRKRP 921 (1019)
Q Consensus 914 ell~g~~P 921 (1019)
||..+..-
T Consensus 274 emailEiq 281 (458)
T KOG1266|consen 274 EMAILEIQ 281 (458)
T ss_pred HHHHheec
Confidence 99988763
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-12 Score=148.96 Aligned_cols=141 Identities=21% Similarity=0.234 Sum_probs=100.6
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccchhh----------------------------------------HHH
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF----------------------------------------KSF 748 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~ 748 (1019)
.+.||.|++|.||+|+.+ +|+.||||+.++...... -++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999987 799999999865321100 024
Q ss_pred HHHHHHHhcC----CCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHH-
Q 001738 749 VAECEALRNI----RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY- 823 (1019)
Q Consensus 749 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~- 823 (1019)
.+|++.+.++ +|.+-+.+-.++.+.. ...++||||++|+++.++....... .+ ...++.+++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~~~-----~~---~~~ia~~~~~~ 268 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDEAG-----LD---RKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHhcC-----CC---HHHHHHHHHHH
Confidence 5566666655 2333344433443221 3368999999999998876542211 22 3456666666
Q ss_pred HHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 824 ~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
.+..+|.. |++|+|++|.||+++.+++++++|||++..+
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 47888988 9999999999999999999999999999765
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.3e-13 Score=152.20 Aligned_cols=181 Identities=31% Similarity=0.471 Sum_probs=139.3
Q ss_pred cccceeecccccccCCCCccccCcc-ccceeeecccccccCCCccccCccccceeeccccccCCCCCCccccccccccee
Q 001738 172 MRLEKLSIADNHLTGQLPASIGNLS-VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250 (1019)
Q Consensus 172 ~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 250 (1019)
+.++.|++.+|.++ .+|...+.+. +|+.|++++|.+. .+|..++.+++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 45788888888888 7777777774 8888888888888 66777888888888888888888 6777666788888888
Q ss_pred ccCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCC
Q 001738 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG 330 (1019)
Q Consensus 251 L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 330 (1019)
+++|++. .+|..+. ....|++|.+++|++. ..+..+.++.++..|.+.+|++.. .+..++.+++|++|++++|.+.
T Consensus 193 ls~N~i~-~l~~~~~-~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 193 LSGNKIS-DLPPEIE-LLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred ccCCccc-cCchhhh-hhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceecccccccc
Confidence 8888887 7777653 3455888888888644 456677888888888888888873 4677788888888888888887
Q ss_pred CCCCCCCCccccccccccchhhcccCccccccCCccc
Q 001738 331 NGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSI 367 (1019)
Q Consensus 331 ~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~ 367 (1019)
.++ .+....+++.|++++|.+...+|...
T Consensus 269 ~i~--------~~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 269 SIS--------SLGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred ccc--------cccccCccCEEeccCccccccchhhh
Confidence 643 25667788888888888876665443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-12 Score=150.02 Aligned_cols=68 Identities=38% Similarity=0.535 Sum_probs=34.6
Q ss_pred CchhhhcccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhccccccccC
Q 001738 412 IPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG 482 (1019)
Q Consensus 412 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 482 (1019)
.+..+.++.++..|.+.+|++. ..+..++.+++++.|++++|.++ .++. ++.+.+|+.|++++|.+..
T Consensus 224 ~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 224 LLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred cchhhhhcccccccccCCceee-eccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccc
Confidence 3334444455555555555554 22445555555555555555555 2332 5555555555555555553
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.4e-12 Score=145.47 Aligned_cols=149 Identities=18% Similarity=0.170 Sum_probs=98.4
Q ss_pred CCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccch----------------------------------hhH---
Q 001738 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG----------------------------------AFK--- 746 (1019)
Q Consensus 704 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~--- 746 (1019)
.+|+. +.+|.|++|.||+|+.+++|+.||||+.++.-.. ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45776 7999999999999999877999999999744110 001
Q ss_pred ---HHHHHHHHHhcCC----CCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHH
Q 001738 747 ---SFVAECEALRNIR----HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819 (1019)
Q Consensus 747 ---~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~ 819 (1019)
++.+|+..+.+++ +...+.+-.++.+-. ...++||||++|+.+.++-.-.....+...+....+..++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s----t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC----SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC----CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 2345555555542 444444444443321 34689999999999987532111111111233333444444
Q ss_pred HHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC----CeEEeeeccceeccc
Q 001738 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM----VAHVGDFGLAKFLYT 867 (1019)
Q Consensus 820 qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~Dfg~a~~~~~ 867 (1019)
|+. .. |++|+|+||.||+++.++ +++++|||++..+..
T Consensus 275 Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 443 45 999999999999999888 999999999987643
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.2e-11 Score=137.18 Aligned_cols=170 Identities=20% Similarity=0.236 Sum_probs=131.3
Q ss_pred EEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccC
Q 001738 722 RGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN 801 (1019)
Q Consensus 722 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~ 801 (1019)
.|..+.++.+|.|++++...........+-++.++.++||+|+++++.++.. ...|+|+|.+. .|..++++
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~-----~~~ylvTErV~--Pl~~~lk~-- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEE-----GTLYLVTERVR--PLETVLKE-- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhccc-----CceEEEeeccc--cHHHHHHH--
Confidence 4666778999999999866654455677889999999999999999998877 67899999985 67778776
Q ss_pred CCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCCCCCCCcccc
Q 001738 802 DQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881 (1019)
Q Consensus 802 ~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~ 881 (1019)
+....+...+.||+.||.|||+.+ +++|++|.-+.|++++.|..||++|..+....... . ....
T Consensus 101 -------l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~-----~--~~~~ 164 (690)
T KOG1243|consen 101 -------LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFN-----A--PAKS 164 (690)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCC-----c--cccc
Confidence 345667778999999999998664 99999999999999999999999999886432111 0 1111
Q ss_pred cccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhC
Q 001738 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918 (1019)
Q Consensus 882 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g 918 (1019)
..--..|..|+.+.... -..|.|-|||+++|++.|
T Consensus 165 ~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 165 LYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred chhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 12223456666543222 456999999999999999
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.3e-11 Score=117.62 Aligned_cols=137 Identities=17% Similarity=0.162 Sum_probs=99.7
Q ss_pred CCceeccccEEEEEEEeCC------CCEEEEEEEeeccc------------c----------hhhHHH----HHHHHHHh
Q 001738 709 SNMIGQGSFGFVYRGILGE------GGLLVAVKVLNLTR------------K----------GAFKSF----VAECEALR 756 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~------~~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~ 756 (1019)
...||.|--+.||.|.... .+..+|||+++... + ...+.+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998653 25799999986221 0 011222 38999999
Q ss_pred cCC--CCCcceEEEEEecCCCCCcceEEEEEeeccCCCHHH-HHhccCCCCCccCCCHHHHHHHHHHHHHHHHHH-hhCC
Q 001738 757 NIR--HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEE-WLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL-HHHC 832 (1019)
Q Consensus 757 ~l~--h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~ 832 (1019)
++. .-++.+.+++ ...++||||+.+..+.. .++.. .++..+...+..+++.++..+ |+.
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKEC- 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 985 3567777764 22479999997654321 22221 145566777889999999999 888
Q ss_pred CCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 833 QPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 833 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
|+||||+++.||+++ ++.++++|||.|...
T Consensus 145 --glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 --NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred --CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999996 468999999988643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.5e-11 Score=121.61 Aligned_cols=130 Identities=20% Similarity=0.161 Sum_probs=95.6
Q ss_pred CCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCc-ceEEEEEecCCCCCcceEEEEEee
Q 001738 709 SNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNL-IKIITICSSIDSHGVDFKALVYEY 787 (1019)
Q Consensus 709 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lV~e~ 787 (1019)
.+.++.|.++.||+++.. +..|++|+...... ....+.+|+++++.+.+.++ .+++.+.. ...++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEe
Confidence 357899999999999974 78899999864432 12346789999998865444 44554432 124799999
Q ss_pred ccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEeeccCCCceEeCCCCCeEEeeeccce
Q 001738 788 MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHC--QPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 788 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
++|.++.+. . .. ...++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.+.
T Consensus 73 i~G~~l~~~----~-------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE----D-------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc----c-------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999887543 0 11 1235679999999999982 12359999999999998 6789999999886
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.5e-12 Score=126.94 Aligned_cols=209 Identities=22% Similarity=0.199 Sum_probs=130.5
Q ss_pred CcccccCCCCcCeEeecccccCCCCchhhhcccccceeecccccccCccccccCCCCcccEEEccCc-ccccccCCCccc
Q 001738 388 IPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSN-YLQGNIPSSLGN 466 (1019)
Q Consensus 388 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~ 466 (1019)
+|-.+..+.+|..+.++.+.-. .+-+....-+.|+++...+..++ ..|. +-..+.+....-+.- -.+|..-..+..
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc-cccc-ccchhhhcCccCCCCCccCCceEEecch
Confidence 3444455566666666655443 11222223356777776666555 2221 111122221111111 112222233444
Q ss_pred ccccchhccccccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCccccCCCCCcEE
Q 001738 467 CRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYL 546 (1019)
Q Consensus 467 l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 546 (1019)
.+.|+.+|||+|.|+ .|.+++.-.+ -.+.|++|+|.|.. -..+..+.+|+.||||+|.++ .+..+=.++.+.+.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~P-kir~L~lS~N~i~~--v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAP-KLRRLILSQNRIRT--VQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhcc-ceeEEeccccceee--ehhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 567778888888877 5655543333 33457777777764 344778889999999999998 566666778889999
Q ss_pred eccCcccccCCCcccccccccCeeccccCcCCCCc-hhhhcccCccceEEccCCcCccccC
Q 001738 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQI-PKYLENLSFLEYLNISSNHFEGKVP 606 (1019)
Q Consensus 547 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~p 606 (1019)
.|+.|.|... ..++++-+|..||+++|+|.... -..++++|-|+.+.|.+|++.+.+.
T Consensus 358 ~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 358 KLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 9999988632 35778888999999999987432 2468889999999999999987654
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.1e-12 Score=132.30 Aligned_cols=210 Identities=23% Similarity=0.193 Sum_probs=117.2
Q ss_pred CCcccceeccCCCccCCCCC--cccCCCCCcceecccCccccCCCCccccCCcchhhhhhcccccccccccccccccccc
Q 001738 97 NLSFLRLIDLADNNFYGNIP--HEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRL 174 (1019)
Q Consensus 97 ~l~~L~~L~L~~n~~~g~~p--~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~l~~~~n~~~~~i~~~~~~~l~~L 174 (1019)
++..|+...|.+..+. ..+ .....|++++.||||+|-|..-. .-..+..+|++|
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~-----------------------~v~~i~eqLp~L 174 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWF-----------------------PVLKIAEQLPSL 174 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHH-----------------------HHHHHHHhcccc
Confidence 5667777777776664 222 24556777777777777665211 111223356667
Q ss_pred ceeecccccccCCCCcc-ccCccccceeeecccccccC-CCccccCccccceeeccccccCCCCCCcccccccccceecc
Q 001738 175 EKLSIADNHLTGQLPAS-IGNLSVLKVINVEENRLSGR-IPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252 (1019)
Q Consensus 175 ~~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 252 (1019)
+.|+|+.|++.-..... -..+++|+.|.|++|.|+-. +-..+..+++|+.|+|..|...+.-..+...++.|++|||+
T Consensus 175 e~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs 254 (505)
T KOG3207|consen 175 ENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLS 254 (505)
T ss_pred hhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhcccc
Confidence 77777777765322221 13566777777777777621 11233456777777777774322333344456677777777
Q ss_pred CCcccCCCCc-cccccccccceEEecccccCCC-CCCc-----ccCCCcCCeEecCCCcCCCC-CCcccccccCcccccc
Q 001738 253 GNRLIGSLPI-DIGLTLPKLTNFVIAENNFSGP-IPNS-----FSNTSNLVMLDLNLNLFSGK-VPINFSRLQNLSWLLL 324 (1019)
Q Consensus 253 ~N~l~~~lp~-~~~~~l~~L~~L~L~~n~l~~~-~p~~-----~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L 324 (1019)
+|.+. ..+. ..-..++.|..|+++.+.+... +|+. ...+++|++|+++.|+|... .-..+..+.+|+.|..
T Consensus 255 ~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 255 NNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred CCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhc
Confidence 77765 3331 1223566666666666666532 2222 24556677777777766421 1223344455666666
Q ss_pred cCccCCC
Q 001738 325 AGNNLGN 331 (1019)
Q Consensus 325 ~~N~l~~ 331 (1019)
..|.+..
T Consensus 334 ~~n~ln~ 340 (505)
T KOG3207|consen 334 TLNYLNK 340 (505)
T ss_pred ccccccc
Confidence 6666554
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=8e-10 Score=105.82 Aligned_cols=131 Identities=26% Similarity=0.313 Sum_probs=97.1
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecc--------cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceE
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--------RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 781 (1019)
..+++|+-+.+|.+.+. |.++++|.=.+. .+-...+..+|++++.+++--.|.-.+-+..++ +..
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~-----~~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP-----DNG 74 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC-----CCC
Confidence 46889999999999874 556777753211 111245567899999988644443333333333 345
Q ss_pred EEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeecc
Q 001738 782 ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861 (1019)
Q Consensus 782 ~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 861 (1019)
.|+|||++|..|.+.+.... ..++..+-.-+.-||.. ||||||+.++||++..++ +.++|||+
T Consensus 75 ~I~me~I~G~~lkd~l~~~~-------------~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGL 137 (204)
T COG3642 75 LIVMEYIEGELLKDALEEAR-------------PDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGL 137 (204)
T ss_pred EEEEEEeCChhHHHHHHhcc-------------hHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCc
Confidence 79999999999998887652 34677888888999999 999999999999997664 99999999
Q ss_pred cee
Q 001738 862 AKF 864 (1019)
Q Consensus 862 a~~ 864 (1019)
+.+
T Consensus 138 g~~ 140 (204)
T COG3642 138 GEF 140 (204)
T ss_pred ccc
Confidence 974
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3e-09 Score=112.92 Aligned_cols=276 Identities=14% Similarity=0.103 Sum_probs=170.0
Q ss_pred CCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcC-CCCCcceEEEEEecC--CCCCcceEEE
Q 001738 707 STSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSI--DSHGVDFKAL 783 (1019)
Q Consensus 707 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~--~~~~~~~~~l 783 (1019)
...+.||+|+-+.+|-.-.. ...+-|++.........+ .+..|... .||-+-.-+.+-... .+.+....-+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34678999999999975432 234668886544432222 23333333 566544322221100 1111123567
Q ss_pred EEeeccCC-CHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccc
Q 001738 784 VYEYMQNG-SLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862 (1019)
Q Consensus 784 V~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 862 (1019)
.|+.+.|. ....+......+.......|...+++++.++.+.+.||+. |.+-||+.++|+|+.+++.|.|.|=..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 78877665 2333333222222234478999999999999999999999 9999999999999999999999986543
Q ss_pred eeccccCCCCCCCCCcccccccCCcccCccccc-----CCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCCCcc--c-HH
Q 001738 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM-----GSEASMAGDVYSFGILLLEMFIR-KRPTDSMFNDGL--T-IH 933 (1019)
Q Consensus 863 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~ell~g-~~Pf~~~~~~~~--~-~~ 933 (1019)
.... ........+|...|.+||... +...+...|-|.+||++++++.| ++||.+...... . ..
T Consensus 165 qi~~--------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E 236 (637)
T COG4248 165 QINA--------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE 236 (637)
T ss_pred eecc--------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch
Confidence 3221 222334568999999999744 44567889999999999999986 999987543211 1 11
Q ss_pred -HHHHHhCCcchhhccChhhhhhhhccCCCCCCCCCCccHHHHHHHHHHHHhhccCC--CcCchhHhHHHHHHHHHHHHH
Q 001738 934 -EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSME--SPIDRTLEMRNVVAKLCAARE 1010 (1019)
Q Consensus 934 -~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~Cl~~--dP~~RP~s~~evl~~L~~i~~ 1010 (1019)
..+... +...-+ ...-.+|.+ .....+.....+..+..+|+.. .+.-|| |++.++..|.++++
T Consensus 237 ~~Ia~g~----f~ya~~--------~~~g~~p~P-~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP-~a~aW~aAl~al~~ 302 (637)
T COG4248 237 TDIAHGR----FAYASD--------QRRGLKPPP-RSIPLSMLPPDVQALFQQAFTESGVATPRP-TAKAWVAALDALRQ 302 (637)
T ss_pred hhhhcce----eeechh--------ccCCCCCCC-CCCChhhcCHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHHHHH
Confidence 011100 000000 001111111 2222333455567777888854 356899 99999999999887
Q ss_pred hhh
Q 001738 1011 AFL 1013 (1019)
Q Consensus 1011 ~~~ 1013 (1019)
.+.
T Consensus 303 ~L~ 305 (637)
T COG4248 303 QLK 305 (637)
T ss_pred hhh
Confidence 664
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-09 Score=103.15 Aligned_cols=143 Identities=24% Similarity=0.257 Sum_probs=104.4
Q ss_pred CCCceeccccEEEEEEEeCCCCEEEEEEEeecc--------cchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcc
Q 001738 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--------RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD 779 (1019)
Q Consensus 708 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 779 (1019)
....+-+|+-+.|+++.+ .|+.++||.-... ..-..++..+|++.+.+++--.|.-..-++.+. .
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~-----~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT-----Y 83 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-----C
Confidence 567899999999999999 5888888863211 122356778999999998643333333333333 2
Q ss_pred eEEEEEeeccC-CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCC---CeE
Q 001738 780 FKALVYEYMQN-GSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM---VAH 855 (1019)
Q Consensus 780 ~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 855 (1019)
.-.++|||++| .++.+++....... ........++++|-+.+.-||.. +|+|||+..+||++..++ .+.
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~----~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDE----SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCc----ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 23699999977 48888887655321 23333467899999999999999 999999999999997665 458
Q ss_pred Eeeecccee
Q 001738 856 VGDFGLAKF 864 (1019)
Q Consensus 856 L~Dfg~a~~ 864 (1019)
++|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999864
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.7e-12 Score=131.82 Aligned_cols=88 Identities=19% Similarity=0.198 Sum_probs=47.4
Q ss_pred CCCCcCeEeecccccCCC----CchhhhcccccceeecccccccCc----cccccCCCCcccEEEccCcccccc----cC
Q 001738 394 NLVNLNGFGIDLNQLTGT----IPHEIGKLTNLQLLYLDFNLLEGS----IPFSLGNLTLLTELELQSNYLQGN----IP 461 (1019)
Q Consensus 394 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p 461 (1019)
+-++|+.+...+|++... +...|...+.|+.+.+++|.|... +...|..+++|+.|||.+|-++.. +.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 345677777777777532 234455566777777777766521 122344555566666666555421 22
Q ss_pred CCcccccccchhcccccccc
Q 001738 462 SSLGNCRSLLSLNVSQNKLT 481 (1019)
Q Consensus 462 ~~~~~l~~L~~L~L~~N~l~ 481 (1019)
.++..++.|+.|+++++.+.
T Consensus 235 kaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHhcccchheeecccccccc
Confidence 33444444555555554444
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-10 Score=130.95 Aligned_cols=199 Identities=23% Similarity=0.209 Sum_probs=146.6
Q ss_pred HHhhCCCCCCCceeccccEEEEEEEeC-CCCEEEEEEEeecccchhhHH--HHHHHHHHhcC-CCCCcceEEEEEecCCC
Q 001738 700 SKATGEFSTSNMIGQGSFGFVYRGILG-EGGLLVAVKVLNLTRKGAFKS--FVAECEALRNI-RHRNLIKIITICSSIDS 775 (1019)
Q Consensus 700 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 775 (1019)
....++|..+..||.|.|+.|+....+ .++..|++|...........+ -..|+.+...+ .|.++++.+..+...
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-- 338 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-- 338 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc--
Confidence 345678899999999999999998765 678899999875432222121 24566665555 488888876666554
Q ss_pred CCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCC-CCe
Q 001738 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-MVA 854 (1019)
Q Consensus 776 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~ 854 (1019)
+..|+--|||++++......-. ..+++..++.+..|++.++.++|+. .++|+|+||+||++..+ +..
T Consensus 339 ---r~~~ip~e~~~~~s~~l~~~~~------~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 339 ---RQGYIPLEFCEGGSSSLRSVTS------QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred ---ccccCchhhhcCcchhhhhHHH------HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhh
Confidence 4456889999999887766322 2277888899999999999999998 99999999999999886 788
Q ss_pred EEeeeccceeccccCCCCCCCCCcccccccCCcc-cCcccccCCCCCCcchHHHHHHHHHHHHhCCCC
Q 001738 855 HVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY-VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921 (1019)
Q Consensus 855 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~P 921 (1019)
++.|||.+..+.- .......++..| .+|+......+..++|+||||..+.|.+++..-
T Consensus 407 ~~~~~~~~t~~~~---------~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 407 KLGDFGCWTRLAF---------SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred hccccccccccce---------ecccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 9999999863211 111111223334 355566667788999999999999999988764
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.8e-11 Score=115.02 Aligned_cols=63 Identities=35% Similarity=0.408 Sum_probs=18.5
Q ss_pred CCCCCCEEEccCcccCCCCCccc-cCCCCCcEEeccCcccccCCC-cccccccccCeeccccCcCC
Q 001738 515 NLQNLVELDISRNQVSGEIPATL-SACTSLEYLNLSYNSFRGGIP-LSLSSLKSVKVLDLSSNNLS 578 (1019)
Q Consensus 515 ~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 578 (1019)
.++.|+.|++++|+|+ .+++.+ ..+++|++|+|++|+|....- ..+..+++|+.|+|.+|+++
T Consensus 62 ~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 62 GLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 3445555555555555 232222 235555555555555543211 23444555555555555554
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-11 Score=128.13 Aligned_cols=162 Identities=25% Similarity=0.189 Sum_probs=89.5
Q ss_pred cCccccceeeecccccccCCC--ccccCccccceeeccccccCCCCC--CcccccccccceeccCCcccCCCCccccccc
Q 001738 193 GNLSVLKVINVEENRLSGRIP--NTLGQLRNSFYLNIAGNQFSGNVP--PSIYNLSSLELLYLRGNRLIGSLPIDIGLTL 268 (1019)
Q Consensus 193 ~~l~~L~~L~l~~n~l~~~~p--~~l~~l~~L~~L~l~~n~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l 268 (1019)
.++.+|+...|.+.... ..+ .....+++++.|||++|-+....| .-...|++|+.|+|+.|++.-......-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45566666666666665 222 244566777777777776653222 2234567777777777776533222233345
Q ss_pred cccceEEecccccCCC-CCCcccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCCCCCCCCccccccccc
Q 001738 269 PKLTNFVIAENNFSGP-IPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCS 347 (1019)
Q Consensus 269 ~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~ 347 (1019)
++|+.|.|+.|.++.. +-.....+++|+.|+|+.|.....-.....-++.|+.|+|++|++-+.+ .......++
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~-----~~~~~~~l~ 271 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD-----QGYKVGTLP 271 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc-----ccccccccc
Confidence 6677777777776532 1223345667777777777433233344445566666666666654322 223344455
Q ss_pred cchhhcccCcccc
Q 001738 348 KLIALGLYGNRFG 360 (1019)
Q Consensus 348 ~L~~L~L~~n~l~ 360 (1019)
.|..|+++.+.+.
T Consensus 272 ~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 272 GLNQLNLSSTGIA 284 (505)
T ss_pred chhhhhccccCcc
Confidence 5555555555444
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-10 Score=84.47 Aligned_cols=39 Identities=59% Similarity=1.054 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcC-CCCCCCCCCCCC--CCCCcceeeeeC
Q 001738 33 ETDRLALLAIKSQLH-DPLGVTSSWNNS--INLCQWTGVTCG 71 (1019)
Q Consensus 33 ~~~~~all~~k~~~~-~~~~~~~sW~~~--~~~c~w~gv~C~ 71 (1019)
++|++||++||+++. ||.+.+++|+.+ ++||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 589999999999998 577899999876 799999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.1e-11 Score=136.96 Aligned_cols=242 Identities=25% Similarity=0.308 Sum_probs=127.1
Q ss_pred CccccceeeecccccccCCCccccCccccceeeccccccCCCCCCcccccccccceeccCCcccCCCCccccccccccce
Q 001738 194 NLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTN 273 (1019)
Q Consensus 194 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~~ 273 (1019)
.+..++.+.+..|.+. .+-..++.+++|..|++.+|+|. .+...+..+++|++|+|++|.|+..-+. ..++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~l---~~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEGL---STLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccch---hhccchhh
Confidence 4455555556666665 23344566666666666666666 3333355666666666666666522221 13445666
Q ss_pred EEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCC-cccccccCcccccccCccCCCCCCCCCCccccccccccchhh
Q 001738 274 FVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP-INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352 (1019)
Q Consensus 274 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L 352 (1019)
|++++|.++.. ..+..++.|+.+++++|++....+ . ...+.+|+.+++++|.+..+. .+..+..+..+
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--------~~~~~~~l~~~ 213 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--------GLDLLKKLVLL 213 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--------chHHHHHHHHh
Confidence 66666666532 244457777777777777775444 2 466777777777777776422 23334444444
Q ss_pred cccCccccccCCcccccccccceEEeccCccccccCcccccCCC--CcCeEeecccccCCCCchhhhcccccceeecccc
Q 001738 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLV--NLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430 (1019)
Q Consensus 353 ~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 430 (1019)
++..|.++..-+ +..+. .|+.+++++|++. ..+..+..+.++..|++.+|
T Consensus 214 ~l~~n~i~~~~~---------------------------l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 214 SLLDNKISKLEG---------------------------LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred hcccccceeccC---------------------------cccchhHHHHHHhcccCccc-cccccccccccccccchhhc
Confidence 555555542111 11111 2555555555555 22244455556666666666
Q ss_pred cccCccccccCCCCcccEEEccCcccccc---cCCC-cccccccchhcccccccc
Q 001738 431 LLEGSIPFSLGNLTLLTELELQSNYLQGN---IPSS-LGNCRSLLSLNVSQNKLT 481 (1019)
Q Consensus 431 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~---~p~~-~~~l~~L~~L~L~~N~l~ 481 (1019)
++... ..+...+.+..+.+..|.+... .... ....+.++.+.+..|.+.
T Consensus 266 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
T KOG0531|consen 266 RISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIR 318 (414)
T ss_pred ccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccc
Confidence 65521 1233444555555555554411 1111 333445555555555554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-10 Score=114.41 Aligned_cols=126 Identities=26% Similarity=0.333 Sum_probs=35.7
Q ss_pred CccccceeeecccccccCCCcccc-CccccceeeccccccCCCCCCcccccccccceeccCCcccCCCCccccccccccc
Q 001738 194 NLSVLKVINVEENRLSGRIPNTLG-QLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLT 272 (1019)
Q Consensus 194 ~l~~L~~L~l~~n~l~~~~p~~l~-~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~lp~~~~~~l~~L~ 272 (1019)
+...+++|+|++|.|+ .+ +.++ .+.+|+.|+|++|.|+ .++ .+..++.|++|++++|+++ .++..+...+++|+
T Consensus 17 n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--
T ss_pred cccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCC
Confidence 3344555555555555 22 2343 3555556666666555 232 3555566666666666655 34333322355555
Q ss_pred eEEecccccCCCC-CCcccCCCcCCeEecCCCcCCCCC---CcccccccCcccccc
Q 001738 273 NFVIAENNFSGPI-PNSFSNTSNLVMLDLNLNLFSGKV---PINFSRLQNLSWLLL 324 (1019)
Q Consensus 273 ~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~---p~~l~~l~~L~~L~L 324 (1019)
.|++++|++...- -..+..+++|++|+|.+|.++... ...+..+++|+.||-
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 5555555554321 134556777777777777776321 112445566666553
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.01 E-value=2e-09 Score=113.10 Aligned_cols=145 Identities=23% Similarity=0.312 Sum_probs=109.3
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccc-hhhHHHHHHHHHHhcCCC--CCcceEEEEEecCCCCCcceEEEEEe
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNIRH--RNLIKIITICSSIDSHGVDFKALVYE 786 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lV~e 786 (1019)
+.++.|.++.||+++.. +|+.+++|+...... .....+..|+++++.+.+ ..+.+++.+...... .+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~--~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV--LGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc--cCCceEEEE
Confidence 57899999999999885 468899999764332 134578899999999975 345777776654321 134689999
Q ss_pred eccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 001738 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHC---------------------------------- 832 (1019)
Q Consensus 787 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------------------- 832 (1019)
|++|.++.+.+... .++..+...++.++++++++||+..
T Consensus 81 ~i~G~~l~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLRP-------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 99998887654321 2677778888889999998888531
Q ss_pred -------------------CCCeEeeccCCCceEeCC--CCCeEEeeecccee
Q 001738 833 -------------------QPPIIHGDLKPSNVLLDH--DMVAHVGDFGLAKF 864 (1019)
Q Consensus 833 -------------------~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~a~~ 864 (1019)
...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998863
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.4e-11 Score=135.12 Aligned_cols=64 Identities=30% Similarity=0.217 Sum_probs=35.1
Q ss_pred cccCCCcCCeEecCCCcCCCCCCcccccccCcccccccCccCCCCCCCCCCccccccccccchhhcccCcccc
Q 001738 288 SFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG 360 (1019)
Q Consensus 288 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~ 360 (1019)
.+..+++|+.|++.+|+|..+ ...+..+++|++|+|++|.|+.+ ..+..++.|+.|++.+|.+.
T Consensus 90 ~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--------~~l~~l~~L~~L~l~~N~i~ 153 (414)
T KOG0531|consen 90 HLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--------EGLSTLTLLKELNLSGNLIS 153 (414)
T ss_pred ccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--------cchhhccchhhheeccCcch
Confidence 355566666666666666632 22255566666666666666542 23344444555555555554
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1e-10 Score=137.25 Aligned_cols=209 Identities=23% Similarity=0.278 Sum_probs=146.6
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc---hhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCc
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV 778 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 778 (1019)
..+.+.+.+.+-+|.++.++.+.-..+|...+.|+...... ...+....+-.+.-..++|-++....-+ ...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCC
Confidence 34567788899999999999998877776666666543221 1112222222222222344444332221 122
Q ss_pred ceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEee
Q 001738 779 DFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGD 858 (1019)
Q Consensus 779 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 858 (1019)
.-.++|++|..++++...++.... .+..-.+.....+..+.+|||.. .+.|+|++|.|++...+++.++.|
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~ 947 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGC------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTD 947 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCC------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCc
Confidence 557899999999999999987663 44444455667788999999998 799999999999999999999999
Q ss_pred eccceecccc---------------------CCC---CCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHH
Q 001738 859 FGLAKFLYTC---------------------QVD---DVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLE 914 (1019)
Q Consensus 859 fg~a~~~~~~---------------------~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~e 914 (1019)
||.......- ... ............||+.|.+||...+......+|.|+.|++++|
T Consensus 948 ~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e 1027 (1205)
T KOG0606|consen 948 FGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFE 1027 (1205)
T ss_pred cccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhh
Confidence 9844322100 000 0001122345679999999999999999999999999999999
Q ss_pred HHhCCCCCCC
Q 001738 915 MFIRKRPTDS 924 (1019)
Q Consensus 915 ll~g~~Pf~~ 924 (1019)
.++|.+||+.
T Consensus 1028 ~l~g~pp~na 1037 (1205)
T KOG0606|consen 1028 VLTGIPPFNA 1037 (1205)
T ss_pred hhcCCCCCCC
Confidence 9999999976
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.1e-12 Score=128.97 Aligned_cols=175 Identities=21% Similarity=0.253 Sum_probs=104.8
Q ss_pred ccccceeecccccccC----CCCccccCccccceeeecccc---cccCCCcc-------ccCccccceeeccccccCCCC
Q 001738 171 WMRLEKLSIADNHLTG----QLPASIGNLSVLKVINVEENR---LSGRIPNT-------LGQLRNSFYLNIAGNQFSGNV 236 (1019)
Q Consensus 171 l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~n~---l~~~~p~~-------l~~l~~L~~L~l~~n~l~~~~ 236 (1019)
+..+++++|++|.+.. .+-..+.+.++|+..++|.-- +...+|+. +.+.++|++||||.|-|....
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 3468888888887753 233456677788888877542 22233332 344568888888888887555
Q ss_pred CCc----ccccccccceeccCCcccCCCCccccccc-cccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCCCC-
Q 001738 237 PPS----IYNLSSLELLYLRGNRLIGSLPIDIGLTL-PKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP- 310 (1019)
Q Consensus 237 p~~----l~~l~~L~~L~L~~N~l~~~lp~~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p- 310 (1019)
++. +.++.+|++|+|.+|.+. |.. +..+ .-|..|. .|+ ..+.-++|++++.++|++.....
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg---~~a-g~~l~~al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~ 175 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLG---PEA-GGRLGRALFELA--VNK-------KAASKPKLRVFICGRNRLENGGAT 175 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCC---hhH-HHHHHHHHHHHH--HHh-------ccCCCcceEEEEeeccccccccHH
Confidence 544 345678888888888764 211 1111 1122222 111 22345678888888888875433
Q ss_pred ---cccccccCcccccccCccCCCCCCCCCCccccccccccchhhcccCcccc
Q 001738 311 ---INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG 360 (1019)
Q Consensus 311 ---~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~ 360 (1019)
..|...+.|+.+.+..|.|..-+. ......+..|++|+.|||.+|-|+
T Consensus 176 ~~A~~~~~~~~leevr~~qN~I~~eG~--~al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 176 ALAEAFQSHPTLEEVRLSQNGIRPEGV--TALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred HHHHHHHhccccceEEEecccccCchh--HHHHHHHHhCCcceeeecccchhh
Confidence 234556778888888887765443 123345566677777777776665
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.8e-11 Score=118.75 Aligned_cols=131 Identities=24% Similarity=0.355 Sum_probs=71.4
Q ss_pred ccccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCccccccccccee
Q 001738 171 WMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250 (1019)
Q Consensus 171 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 250 (1019)
|..|++|||++|.++ .+.+++.-++.++.|++|+|.+. .+ +.+..|++|+.||||+|.++ .+-.+-.++.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLG------ 352 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLG------ 352 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhc------
Confidence 445555555555555 55555555555555555555554 11 22445555555555555554 2333333344
Q ss_pred ccCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCCCC-CCcccccccCcccccccCccC
Q 001738 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGK-VPINFSRLQNLSWLLLAGNNL 329 (1019)
Q Consensus 251 L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~l 329 (1019)
+++.|.|++|.+... +.++.+-+|..||+++|+|... -...+++|+.|+.|.|.+|.+
T Consensus 353 -------------------NIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 353 -------------------NIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred -------------------CEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 444555555544321 2455666777777777777632 234567777777777777777
Q ss_pred CCC
Q 001738 330 GNG 332 (1019)
Q Consensus 330 ~~~ 332 (1019)
...
T Consensus 412 ~~~ 414 (490)
T KOG1259|consen 412 AGS 414 (490)
T ss_pred ccc
Confidence 643
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.9e-10 Score=136.31 Aligned_cols=263 Identities=22% Similarity=0.246 Sum_probs=127.5
Q ss_pred cccccccccccccceeecccccccCCCCccccCccccceeeecccccccCCCccccCccccceeeccccccCCCCCCccc
Q 001738 162 QIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY 241 (1019)
Q Consensus 162 ~i~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~ 241 (1019)
.++..++..++.|++|||++|.=-+.+|.++++|-+|++|+|++..++ .+|..+++|+.|.+|++..+.-...+|..+.
T Consensus 561 ~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~ 639 (889)
T KOG4658|consen 561 EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILL 639 (889)
T ss_pred hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhh
Confidence 344444445666777777766555577777777777777777777777 6777777777777777776665445555555
Q ss_pred ccccccceeccCCccc--CCCCccccccccccceEEecccccCCCCCCcccCCCcCC----eEecCCCcCCCCCCccccc
Q 001738 242 NLSSLELLYLRGNRLI--GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLV----MLDLNLNLFSGKVPINFSR 315 (1019)
Q Consensus 242 ~l~~L~~L~L~~N~l~--~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~l~~ 315 (1019)
.|++|++|.+..-... +..-.++ ..+.+|+.+....... .+-..+..++.|. .+.+..+... ..+..+..
T Consensus 640 ~L~~Lr~L~l~~s~~~~~~~~l~el-~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~ 715 (889)
T KOG4658|consen 640 ELQSLRVLRLPRSALSNDKLLLKEL-ENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGS 715 (889)
T ss_pred hcccccEEEeeccccccchhhHHhh-hcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeeccccc
Confidence 5777777766554311 0000011 1233333333322211 0000111111111 2222221111 23344445
Q ss_pred ccCcccccccCccCCCCCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCC
Q 001738 316 LQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNL 395 (1019)
Q Consensus 316 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l 395 (1019)
+.+|+.|.+.++.+.........-...+..++++..+...++ ... ..+.+..-.
T Consensus 716 l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~------------------------~~~--r~l~~~~f~ 769 (889)
T KOG4658|consen 716 LGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNC------------------------HML--RDLTWLLFA 769 (889)
T ss_pred ccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcc------------------------ccc--cccchhhcc
Confidence 555555555555443221110000000000001111100000 000 123333455
Q ss_pred CCcCeEeecccccCCCCchhhhcccccceeecccccccCc-cccccCCCCcccEEEccCcc
Q 001738 396 VNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGS-IPFSLGNLTLLTELELQSNY 455 (1019)
Q Consensus 396 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~ 455 (1019)
++|+.|.+..+.....+.+....+..++.+-+..+.+.+. .-...++++++..+.++.=.
T Consensus 770 ~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~ 830 (889)
T KOG4658|consen 770 PHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLK 830 (889)
T ss_pred CcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccc
Confidence 7888888888777666666677777777777777777755 34455555666555554433
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.5e-09 Score=103.37 Aligned_cols=124 Identities=27% Similarity=0.256 Sum_probs=81.8
Q ss_pred EEEEEEeCCCCEEEEEEEeeccc--------------c------------hhhHHHHHHHHHHhcCCCC--CcceEEEEE
Q 001738 719 FVYRGILGEGGLLVAVKVLNLTR--------------K------------GAFKSFVAECEALRNIRHR--NLIKIITIC 770 (1019)
Q Consensus 719 ~V~~~~~~~~~~~vavK~~~~~~--------------~------------~~~~~~~~E~~~l~~l~h~--niv~~~~~~ 770 (1019)
.||.|... +|..+|||+.+... . .......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 38999886 78899999985321 0 0123467899999999755 567776552
Q ss_pred ecCCCCCcceEEEEEeecc--CCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHH-HhhCCCCCeEeeccCCCceE
Q 001738 771 SSIDSHGVDFKALVYEYMQ--NGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY-LHHHCQPPIIHGDLKPSNVL 847 (1019)
Q Consensus 771 ~~~~~~~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~-LH~~~~~~ivH~Dlkp~NIl 847 (1019)
.-++||||++ |..+..+.... ++......++.+++..+.. +|+. ||||||+.+.||+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred ---------CCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 2379999998 65554433322 1123445677888886655 5788 9999999999999
Q ss_pred eCCCCCeEEeeecccee
Q 001738 848 LDHDMVAHVGDFGLAKF 864 (1019)
Q Consensus 848 l~~~~~~kL~Dfg~a~~ 864 (1019)
++++ .+.++|||.|..
T Consensus 140 v~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp EETT-CEEE--GTTEEE
T ss_pred eecc-eEEEEecCccee
Confidence 9887 999999998874
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.2e-08 Score=105.07 Aligned_cols=146 Identities=16% Similarity=0.077 Sum_probs=103.0
Q ss_pred CceeccccEEEEEEEeCCCCEEEEEEEeecccch-hh----------HHHHHHHHHHhcCCC--CCcceEEEEEecCCCC
Q 001738 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AF----------KSFVAECEALRNIRH--RNLIKIITICSSIDSH 776 (1019)
Q Consensus 710 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~ 776 (1019)
+.+-+.....|+++.. .|+.|.||........ .. ..+.+|...+.++.. -.+++.+++.+.....
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 4455445556777776 5889999977432211 01 136789888888842 3344555565443222
Q ss_pred CcceEEEEEeeccCC-CHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCC-----
Q 001738 777 GVDFKALVYEYMQNG-SLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH----- 850 (1019)
Q Consensus 777 ~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 850 (1019)
.....++|||++++. +|.+++..... .+.+......++.+++..+.-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 224578999999886 89999864221 1245667778999999999999999 9999999999999975
Q ss_pred --CCCeEEeeecccee
Q 001738 851 --DMVAHVGDFGLAKF 864 (1019)
Q Consensus 851 --~~~~kL~Dfg~a~~ 864 (1019)
++.+.++||+.+..
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46899999998853
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.3e-09 Score=128.84 Aligned_cols=274 Identities=21% Similarity=0.203 Sum_probs=119.1
Q ss_pred ccceeecccccccCCCCccccCccccceeeecccc--cccCCCccccCccccceeeccccccCCCCCCccccccccccee
Q 001738 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENR--LSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250 (1019)
Q Consensus 173 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~--l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 250 (1019)
..+...+.+|.+. .++....+ +.|+.|-+..|. +....++.|..++.|++|||++|.=-+.+|+.+++|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 3444444444444 33333222 235555555553 3322222344455555555555443334555555555555555
Q ss_pred ccCCcccCCCCccccccccccceEEecccccCCCCCCcccCCCcCCeEecCCCcCC--CCCCcccccccCcccccccCcc
Q 001738 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFS--GKVPINFSRLQNLSWLLLAGNN 328 (1019)
Q Consensus 251 L~~N~l~~~lp~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L~~N~ 328 (1019)
|++..+. .+|..+. ++.+|.+|++..+.....+|.....+++|++|.+-.-... ...-..+..|.+|+.|......
T Consensus 602 L~~t~I~-~LP~~l~-~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLG-NLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred ccCCCcc-ccchHHH-HHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 5555544 4444443 3444444444444443344445555666666665443311 1112222233333333321111
Q ss_pred CCCCCCCCCCccccccccccchhhcccCccccccCCcccccccccceEEeccCccccccCcccccCCCCcCeEeeccccc
Q 001738 329 LGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQL 408 (1019)
Q Consensus 329 l~~~~~~~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~~~L~l~~n~i~~~~p~~~~~l~~L~~L~L~~n~l 408 (1019)
. .....+..+.+|. +....+.+..+. ....+..+..+.+|+.|.+.++.+
T Consensus 680 ~--------~~~e~l~~~~~L~---------------------~~~~~l~~~~~~-~~~~~~~~~~l~~L~~L~i~~~~~ 729 (889)
T KOG4658|consen 680 V--------LLLEDLLGMTRLR---------------------SLLQSLSIEGCS-KRTLISSLGSLGNLEELSILDCGI 729 (889)
T ss_pred h--------HhHhhhhhhHHHH---------------------HHhHhhhhcccc-cceeecccccccCcceEEEEcCCC
Confidence 1 0000111111111 111111111111 114556677788888888888887
Q ss_pred CCCCchhhhc------ccccceeecccccccCccccccCCCCcccEEEccCcccccccCCCcccccccchhcccccccc
Q 001738 409 TGTIPHEIGK------LTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT 481 (1019)
Q Consensus 409 ~~~~p~~~~~------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 481 (1019)
.......... ++++..+...++..- ..+.+..-.++|+.|++..+.....+.+....+..+..+.+..+.+.
T Consensus 730 ~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 730 SEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred chhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 6433322221 122222222222211 22333334577778887777765555555555555554444444443
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.3e-08 Score=100.59 Aligned_cols=134 Identities=28% Similarity=0.233 Sum_probs=98.4
Q ss_pred CCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccc----------------------hhhHHHHHHHHHHhcCCCC--
Q 001738 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK----------------------GAFKSFVAECEALRNIRHR-- 761 (1019)
Q Consensus 706 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~-- 761 (1019)
+.+...||.|--+.||.|... .|.++|||.-+.... -.+...++|.++|.++...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999987 788999997542110 0133457899999998644
Q ss_pred CcceEEEEEecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecc
Q 001738 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDL 841 (1019)
Q Consensus 762 niv~~~~~~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 841 (1019)
.+.+.+++ +..++||||++|..|...- ++....-.++..|++-+...-.. ||||||+
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~---GiVHGDl 228 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRR---GIVHGDL 228 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence 66666654 4558999999987665422 12233344555666666555566 9999999
Q ss_pred CCCceEeCCCCCeEEeeeccce
Q 001738 842 KPSNVLLDHDMVAHVGDFGLAK 863 (1019)
Q Consensus 842 kp~NIll~~~~~~kL~Dfg~a~ 863 (1019)
++-||++++||.+.++||--+.
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred chheEEEecCCCEEEEeCcccc
Confidence 9999999999999999997664
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.8e-09 Score=84.47 Aligned_cols=59 Identities=42% Similarity=0.571 Sum_probs=31.8
Q ss_pred CCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEccCCc
Q 001738 542 SLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNH 600 (1019)
Q Consensus 542 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~ 600 (1019)
+|++|++++|+|+...+..|..+++|++|++++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555554444555555555555555554
|
... |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.9e-09 Score=84.41 Aligned_cols=61 Identities=39% Similarity=0.525 Sum_probs=52.8
Q ss_pred CCCCEEEccCcccCCCCCccccCCCCCcEEeccCcccccCCCcccccccccCeeccccCcC
Q 001738 517 QNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577 (1019)
Q Consensus 517 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 577 (1019)
++|++|++++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4688899999999866667888999999999999999888888899999999999999875
|
... |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.6e-07 Score=103.00 Aligned_cols=178 Identities=16% Similarity=0.152 Sum_probs=133.4
Q ss_pred ccEEEEEEEeCCCCEEEEEEEeecccchhhHHHHHHHHHHhcCCCCCcceEEEEEecCCCCCcceEEEEEeeccC-CCHH
Q 001738 716 SFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQN-GSLE 794 (1019)
Q Consensus 716 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~-gsL~ 794 (1019)
.-.+.|++....+|..|++|+++.........-..-+++++++.|+|+|++..++... ..+....++|++|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~-tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTY-TFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhh-ccCcceEEEEEecCCCCchHH
Confidence 3468899999999999999999544333333334568889999999999999988743 2233678899999985 4777
Q ss_pred HHHhccCCCC---------CccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceec
Q 001738 795 EWLHHSNDQH---------DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865 (1019)
Q Consensus 795 ~~l~~~~~~~---------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 865 (1019)
++--...... .....++..+|.++.|+..||.++|+. |..-+-+.|.+|+++.+.+++|...|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7654433221 223478899999999999999999999 9999999999999999999999888876654
Q ss_pred cccCCCCCCCCCcccccccCCcccCcccccCCCCCCcchHHHHHHHHHHHHhCCCC
Q 001738 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921 (1019)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell~g~~P 921 (1019)
..+. . |-+. --.+-|.=.||.++..|.+|..-
T Consensus 444 ~~d~-------------------~--~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDP-------------------T--EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCC-------------------C--cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 2211 0 1111 12356899999999999999654
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.3e-07 Score=90.93 Aligned_cols=152 Identities=16% Similarity=0.116 Sum_probs=110.0
Q ss_pred hCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecc------cchhhHHHHHHHHHHhcCC--CCCcceEEEEEecCC
Q 001738 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT------RKGAFKSFVAECEALRNIR--HRNLIKIITICSSID 774 (1019)
Q Consensus 703 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~ 774 (1019)
.+++-..-=-|+||.+.|+..... |+.+-+|.-... .+-....|.+|...+.++. .-.+.+++ ++....
T Consensus 17 ~~~wve~pN~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k 93 (216)
T PRK09902 17 EGDWVEEPNYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVK 93 (216)
T ss_pred CCceecCCCcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeec
Confidence 344433344577999999998874 557888876411 0234577899999999884 22255555 333333
Q ss_pred CCCcceEEEEEeeccC-CCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCC
Q 001738 775 SHGVDFKALVYEYMQN-GSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMV 853 (1019)
Q Consensus 775 ~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 853 (1019)
.......++|+|-++| .+|.+++.+... .+.+......+..+++..++-||+. |+.|+|+.+.||+++.++.
T Consensus 94 ~~~~~rA~LVTe~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~ 166 (216)
T PRK09902 94 IEGEWRALLVTEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGK 166 (216)
T ss_pred cCCceEEEEEEEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCC
Confidence 3334567899998853 489998866432 2357777889999999999999999 9999999999999986677
Q ss_pred --eEEeeecccee
Q 001738 854 --AHVGDFGLAKF 864 (1019)
Q Consensus 854 --~kL~Dfg~a~~ 864 (1019)
++++||.-++.
T Consensus 167 ~~v~lIDlEk~r~ 179 (216)
T PRK09902 167 AEAGFLDLEKSRR 179 (216)
T ss_pred eeEEEEEhhccch
Confidence 99999987763
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.6e-07 Score=93.32 Aligned_cols=109 Identities=26% Similarity=0.290 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhcCC--CCCcceEEEEEecCCCCCcceEEEEEeeccCC-CHHHHHhccCCCCCccCCCHHHHHHHHHHHH
Q 001738 746 KSFVAECEALRNIR--HRNLIKIITICSSIDSHGVDFKALVYEYMQNG-SLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822 (1019)
Q Consensus 746 ~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~ 822 (1019)
....+|...+.++. .=.+++.+++.+...+.. ...++|+|++++. +|.+++..... .+......++.+++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~-~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~~l~ 128 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGG-YRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLRALA 128 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCc-eeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHHHHH
Confidence 45678888877774 333566777766644333 5568999999884 89999887432 45667788999999
Q ss_pred HHHHHHhhCCCCCeEeeccCCCceEeCCCC---CeEEeeecccee
Q 001738 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDM---VAHVGDFGLAKF 864 (1019)
Q Consensus 823 ~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~a~~ 864 (1019)
..++-||++ ||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 129 ~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 129 RLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999999 999999999999999887 899999998874
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=5e-09 Score=94.08 Aligned_cols=81 Identities=23% Similarity=0.402 Sum_probs=35.7
Q ss_pred CCEEEccCcccCCCCCcccc-CCCCCcEEeccCcccccCCCcccccccccCeeccccCcCCCCchhhhcccCccceEEcc
Q 001738 519 LVELDISRNQVSGEIPATLS-ACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNIS 597 (1019)
Q Consensus 519 L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 597 (1019)
|+..+|++|.+. ..|+.|. ..+.++.|+|++|.|+ .+|..+..++.|+.|+++.|.|. ..|..+..+.+|..|+..
T Consensus 55 l~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 55 LTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred EEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 344444444444 2222222 2234444444444444 34444444444444444444444 334444444444444444
Q ss_pred CCcCc
Q 001738 598 SNHFE 602 (1019)
Q Consensus 598 ~N~l~ 602 (1019)
+|.+.
T Consensus 132 ~na~~ 136 (177)
T KOG4579|consen 132 ENARA 136 (177)
T ss_pred CCccc
Confidence 44443
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.6e-09 Score=118.94 Aligned_cols=180 Identities=29% Similarity=0.303 Sum_probs=106.9
Q ss_pred chhhhcccccceeecccccccCccccccCCC-CcccEEEccCcccc----------cccCCCcccccccchhcccccccc
Q 001738 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNL-TLLTELELQSNYLQ----------GNIPSSLGNCRSLLSLNVSQNKLT 481 (1019)
Q Consensus 413 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~----------~~~p~~~~~l~~L~~L~L~~N~l~ 481 (1019)
|-.+..+.+|++|.|.++.|.. ...+..+ ..|+.|.-. |.+. |.+..++. ...|...+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~-Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPV-WNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchh-hhhHhhhhcchhhHH
Confidence 5566677788888888777763 1111111 134444322 2221 11111111 235677778888876
Q ss_pred CCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCc-cccCCCCCcEEeccCcccccCCCcc
Q 001738 482 GALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLS 560 (1019)
Q Consensus 482 ~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 560 (1019)
.+.+++ .+.+-++.|+|++|+++.. +.+..++.|++|||++|.+. .+|. ...++. |+.|++++|-++.. ..
T Consensus 178 -~mD~SL-qll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~g 249 (1096)
T KOG1859|consen 178 -LMDESL-QLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RG 249 (1096)
T ss_pred -hHHHHH-HHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hh
Confidence 333333 3344455677777777763 36777778888888888887 4443 333444 78888888877633 24
Q ss_pred cccccccCeeccccCcCCCCch-hhhcccCccceEEccCCcCccc
Q 001738 561 LSSLKSVKVLDLSSNNLSGQIP-KYLENLSFLEYLNISSNHFEGK 604 (1019)
Q Consensus 561 ~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~ 604 (1019)
+.+|++|+.|||++|-|.+.-. ..++.|..|+.|+|.+|++.+-
T Consensus 250 ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 6677788888888887765322 2356667777888888887653
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.7e-09 Score=118.07 Aligned_cols=180 Identities=27% Similarity=0.245 Sum_probs=118.2
Q ss_pred cccccCCCCcCeEeecccccCCCCchhhhcc-cccceeeccccccc---Ccccc---ccCC---CCcccEEEccCccccc
Q 001738 389 PSGIGNLVNLNGFGIDLNQLTGTIPHEIGKL-TNLQLLYLDFNLLE---GSIPF---SLGN---LTLLTELELQSNYLQG 458 (1019)
Q Consensus 389 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N~l~---~~~p~---~l~~---l~~L~~L~L~~N~l~~ 458 (1019)
|-.+..+.+|+.|.+.++.+.. .. .+..+ ..|++|--.+ .+. ..+.. .+++ ...|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~~-GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-AK-GLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-hh-hhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 5567788999999999999863 11 11111 2334433221 111 01111 1111 135777778888887
Q ss_pred ccCCCcccccccchhccccccccCCcchhhhhccccccccccCCCcCCCCccccccCCCCCCEEEccCcccCCCCCcccc
Q 001738 459 NIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLS 538 (1019)
Q Consensus 459 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 538 (1019)
....++.-++.|+.|||++|+++. .. .+-.+. -+++||+++|.+....--...++. |+.|.|++|.++ .+ ..+.
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~-~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~-tL-~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTK-VD-NLRRLP-KLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALT-TL-RGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhh-hH-HHHhcc-cccccccccchhccccccchhhhh-heeeeecccHHH-hh-hhHH
Confidence 566677777888888888888872 22 333333 345688888888765544555554 999999999998 33 3578
Q ss_pred CCCCCcEEeccCcccccCCC-cccccccccCeeccccCcCC
Q 001738 539 ACTSLEYLNLSYNSFRGGIP-LSLSSLKSVKVLDLSSNNLS 578 (1019)
Q Consensus 539 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 578 (1019)
++.+|+.|||++|-|.+.-- .-++.|..|+.|+|.+|.+-
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99999999999999985322 23567789999999999997
|
|
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.51 E-value=8.3e-07 Score=89.09 Aligned_cols=142 Identities=16% Similarity=0.158 Sum_probs=96.1
Q ss_pred hhCCCCCCCceeccccEEEEEEEeCCCCEEEEEEEeecccchhhHH---------HHHHHHHHhcCC---CCCcceEEEE
Q 001738 702 ATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS---------FVAECEALRNIR---HRNLIKIITI 769 (1019)
Q Consensus 702 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~---h~niv~~~~~ 769 (1019)
..++|.+.+++-......|.+... +|+.+++|..+.......+. ..+++..+.+++ -.....++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 457888888888888888888776 68899999987543322222 233444444442 3333343443
Q ss_pred EecCCCCCcceEEEEEeeccCCCHHHHHhccCCCCCccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeeccCCCceEeC
Q 001738 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849 (1019)
Q Consensus 770 ~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 849 (1019)
.+.....-....++||||++|..|.+... +++ .++..+++++.-+|+. |++|||..|.|++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~ 169 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED----------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVS 169 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh----------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEE
Confidence 33322222245568999999988766432 222 2456778889999999 999999999999998
Q ss_pred CCCCeEEeeeccce
Q 001738 850 HDMVAHVGDFGLAK 863 (1019)
Q Consensus 850 ~~~~~kL~Dfg~a~ 863 (1019)
.++ ++++||+..+
T Consensus 170 ~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 170 NNG-IRIIDTQGKR 182 (229)
T ss_pred CCc-EEEEECcccc
Confidence 654 9999998765
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-07 Score=108.20 Aligned_cols=101 Identities=19% Similarity=0.426 Sum_probs=76.5
Q ss_pred HHHHHHHHHHhhCCCCCeEeeccCCCceEeCCCCCeEEeeeccceeccccCCCC--CCCCCcccccccCCcccCcccccC
Q 001738 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD--VETPSSSIGIKGTVGYVAPEYGMG 896 (1019)
Q Consensus 819 ~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~ 896 (1019)
.+++.|+.|+|... ++||++|.|++|.++..+..||+.|+++.......... ........-..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34558999999874 99999999999999999999999999886543311100 001111112234678999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHhCCCC
Q 001738 897 SEASMAGDVYSFGILLLEMFIRKRP 921 (1019)
Q Consensus 897 ~~~~~~sDvwSlGvil~ell~g~~P 921 (1019)
...+.++|+||+||.+|.+..|+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~ 208 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKS 208 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcc
Confidence 8899999999999999999955554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1019 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-38 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-38 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-36 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 6e-35 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-25 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 4e-25 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-19 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 5e-19 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 8e-19 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-18 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-18 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-18 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 2e-18 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-18 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-18 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-18 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 5e-18 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 7e-18 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 8e-18 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 8e-18 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 8e-18 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 8e-18 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 8e-18 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 9e-18 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-17 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-17 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-17 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-17 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-17 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-17 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-17 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-17 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-17 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-17 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-17 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-17 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-17 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-17 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-17 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-17 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-17 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-17 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-17 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-17 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-17 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-17 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-17 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-17 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-17 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-17 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-17 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-17 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 3e-17 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 3e-17 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 3e-17 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 3e-17 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 3e-17 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 3e-17 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-17 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 4e-17 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 4e-17 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-17 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 5e-17 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-15 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 2e-11 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-17 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 7e-17 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 7e-17 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 7e-17 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 7e-17 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 7e-17 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-17 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 7e-17 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 7e-17 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 9e-17 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-16 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 1e-16 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-16 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-16 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-16 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-16 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 2e-16 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-16 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-16 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 2e-16 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 3e-16 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 3e-16 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 3e-16 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 4e-16 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 7e-16 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 7e-16 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 8e-16 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 8e-16 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 8e-16 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 9e-16 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 9e-16 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-15 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 1e-15 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 1e-15 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 1e-15 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 1e-15 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 1e-15 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-15 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-15 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 1e-15 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-15 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-15 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-15 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-15 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-15 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-15 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-15 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-15 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 3e-15 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 3e-15 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 3e-15 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 3e-15 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-15 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 3e-15 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-15 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-15 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 4e-15 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 4e-15 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-15 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-15 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 4e-15 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 4e-15 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 4e-15 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 5e-15 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 5e-15 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 5e-15 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 5e-15 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 6e-15 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 7e-15 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 7e-15 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 8e-15 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 8e-15 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 8e-15 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 8e-15 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 9e-15 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-14 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-14 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-14 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-14 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-14 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-14 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-14 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-14 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 3e-14 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 4e-14 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 4e-14 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 5e-14 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 5e-14 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 5e-14 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 5e-14 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 5e-14 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 5e-14 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 5e-14 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 5e-14 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 6e-14 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 7e-14 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 7e-14 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 7e-14 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-14 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-14 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 7e-14 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 7e-14 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 7e-14 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 8e-14 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 8e-14 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 1e-13 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-13 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-13 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 3e-13 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 3e-13 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-13 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 4e-13 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 4e-13 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 4e-13 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 4e-13 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 5e-13 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 5e-13 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 5e-13 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 6e-13 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-12 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 1e-12 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 1e-12 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-12 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-12 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-12 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 2e-12 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-12 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-12 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-12 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-12 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-12 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-12 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-12 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 4e-12 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 4e-12 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 4e-12 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 4e-12 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 6e-12 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 7e-12 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-12 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 8e-12 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 8e-12 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 9e-12 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 9e-12 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 9e-12 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 9e-12 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 1e-11 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-11 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 1e-11 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 2e-11 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-11 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 2e-11 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-11 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-11 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-11 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 2e-11 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-11 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 2e-11 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 2e-11 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-11 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 3e-11 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 3e-11 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 3e-11 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-11 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 4e-11 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-11 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 4e-11 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-11 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 5e-11 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 6e-11 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 6e-11 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 6e-11 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 6e-11 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 7e-11 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 7e-11 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 8e-11 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 8e-11 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 9e-11 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 9e-11 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 9e-11 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-10 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 1e-10 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 1e-10 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 1e-10 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 1e-10 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 1e-10 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 1e-10 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 1e-10 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 1e-10 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 1e-10 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-10 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-10 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 1e-10 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-10 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 2e-10 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 2e-10 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 2e-10 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-10 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 2e-10 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 2e-10 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-10 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-10 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 2e-10 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-10 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-10 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-10 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 3e-10 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-10 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-10 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 3e-10 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 3e-10 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-10 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 3e-10 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 3e-10 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 3e-10 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-10 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-10 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-10 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-10 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-10 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-10 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 4e-10 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 4e-10 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 4e-10 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 4e-10 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 4e-10 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 4e-10 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-10 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-10 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-10 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-10 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 4e-10 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 4e-10 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 4e-10 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-10 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 5e-10 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 5e-10 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 5e-10 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 5e-10 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 5e-10 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 5e-10 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 6e-10 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 6e-10 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 6e-10 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-10 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 6e-10 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 6e-10 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-10 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 6e-10 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 7e-10 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 7e-10 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 7e-10 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 7e-10 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 7e-10 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 7e-10 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 7e-10 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 7e-10 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-10 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 7e-10 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 7e-10 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 7e-10 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 8e-10 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 8e-10 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 8e-10 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 8e-10 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 8e-10 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 8e-10 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 8e-10 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 8e-10 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 8e-10 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 8e-10 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 8e-10 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 8e-10 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 8e-10 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 8e-10 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 8e-10 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 8e-10 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 8e-10 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 9e-10 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 9e-10 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 9e-10 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 1e-09 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 1e-09 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-09 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-09 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 1e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 1e-09 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-09 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 1e-09 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 1e-09 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 1e-09 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-09 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-09 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-09 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 1e-09 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 1e-09 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 1e-09 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-09 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 2e-09 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-09 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 2e-09 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-09 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 2e-09 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-09 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-09 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-09 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-09 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-09 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-09 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-09 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-09 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-09 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-09 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-09 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 2e-09 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-09 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-09 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-09 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 2e-09 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 2e-09 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 2e-09 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-09 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-09 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-09 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-09 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 2e-09 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-09 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-09 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-09 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-09 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-09 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-09 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-09 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-09 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-09 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 2e-09 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 2e-09 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 2e-09 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 2e-09 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 2e-09 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-09 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-09 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-09 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-09 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-09 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 2e-09 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-09 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 2e-09 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-09 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 2e-09 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-09 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 3e-09 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 3e-09 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 3e-09 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 3e-09 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 3e-09 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-09 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 3e-09 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-09 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 3e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 3e-09 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 3e-09 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-09 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 3e-09 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 3e-09 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 3e-09 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 3e-09 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 3e-09 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 3e-09 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 3e-09 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-09 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 3e-09 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 3e-09 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 3e-09 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 3e-09 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-09 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 4e-09 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 4e-09 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 4e-09 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 5e-09 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 5e-09 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 5e-09 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-09 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 5e-09 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 5e-09 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 6e-09 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 6e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-09 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 6e-09 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 6e-09 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 6e-09 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 6e-09 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 6e-09 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 6e-09 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 6e-09 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-09 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 6e-09 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 6e-09 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 6e-09 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 7e-09 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 7e-09 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 7e-09 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-09 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 8e-09 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 8e-09 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 8e-09 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 8e-09 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 8e-09 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 8e-09 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-08 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-08 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-08 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-08 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-08 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-08 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-08 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-08 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 2e-08 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-08 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-08 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-08 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-08 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-08 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-08 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 2e-08 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-08 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 2e-08 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-08 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 2e-08 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 3e-08 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 3e-08 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 3e-08 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-08 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 3e-08 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 3e-08 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 3e-08 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 3e-08 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 3e-08 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 3e-08 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 3e-08 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 3e-08 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-08 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 4e-08 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 4e-08 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 4e-08 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 4e-08 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 4e-08 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 4e-08 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 5e-08 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 5e-08 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 5e-08 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 6e-08 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 6e-08 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 6e-08 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-08 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 7e-08 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 7e-08 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 7e-08 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 7e-08 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 7e-08 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 8e-08 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 8e-08 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 8e-08 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 8e-08 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 8e-08 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 8e-08 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 9e-08 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 9e-08 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 9e-08 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 9e-08 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 9e-08 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 1e-07 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 1e-07 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-07 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-07 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-07 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 1e-07 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-07 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-07 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 1e-07 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 1e-07 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 1e-07 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-07 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-07 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 1e-07 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 1e-07 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 1e-07 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 1e-07 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 1e-07 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 1e-07 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 1e-07 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 1e-07 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 1e-07 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 1e-07 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-07 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 2e-07 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-07 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 2e-07 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-07 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 2e-07 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 2e-07 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 2e-07 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-07 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 2e-07 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 2e-07 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-07 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 2e-07 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-07 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-07 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-07 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 2e-07 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 2e-07 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-07 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-07 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-07 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-07 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-07 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 3e-07 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 3e-07 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-07 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-07 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 3e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-07 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 3e-07 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-07 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-07 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 3e-07 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 3e-07 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-07 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 3e-07 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-07 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-07 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-07 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-07 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 3e-07 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-07 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 4e-07 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-07 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 4e-07 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 4e-07 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 4e-07 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 4e-07 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 4e-07 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 4e-07 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 4e-07 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 4e-07 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 4e-07 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 4e-07 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 4e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 4e-07 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 4e-07 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 4e-07 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 4e-07 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 4e-07 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 4e-07 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 4e-07 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 4e-07 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 4e-07 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 4e-07 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 4e-07 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 5e-07 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 5e-07 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 5e-07 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 5e-07 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 5e-07 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 5e-07 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 5e-07 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 5e-07 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 5e-07 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 5e-07 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 5e-07 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 5e-07 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 5e-07 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 5e-07 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 5e-07 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 5e-07 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 5e-07 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 5e-07 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 6e-07 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 6e-07 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 6e-07 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 6e-07 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 6e-07 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 6e-07 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 6e-07 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 6e-07 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 6e-07 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 6e-07 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 6e-07 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 6e-07 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 6e-07 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 6e-07 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 6e-07 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 6e-07 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 6e-07 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 6e-07 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 6e-07 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 6e-07 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 7e-07 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 7e-07 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-07 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 7e-07 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 7e-07 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 7e-07 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 7e-07 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 7e-07 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 7e-07 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 8e-07 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 8e-07 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 8e-07 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 8e-07 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 9e-07 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 9e-07 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 9e-07 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 9e-07 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 1e-06 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 1e-06 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 1e-06 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 1e-06 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 1e-06 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-06 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 1e-06 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 1e-06 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 1e-06 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 1e-06 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-06 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 1e-06 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 1e-06 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 1e-06 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 1e-06 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 1e-06 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 1e-06 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 1e-06 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 1e-06 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 1e-06 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-06 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 1e-06 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 1e-06 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 1e-06 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-06 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-06 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 1e-06 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 1e-06 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 1e-06 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 1e-06 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 1e-06 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 1e-06 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-06 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 1e-06 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 2e-06 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-06 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-06 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-06 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 2e-06 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 2e-06 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 2e-06 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-06 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-06 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 2e-06 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 2e-06 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 2e-06 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 2e-06 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-06 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-06 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-06 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-06 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 2e-06 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-06 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-06 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-06 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 2e-06 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 2e-06 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-06 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 2e-06 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 2e-06 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 2e-06 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 2e-06 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 2e-06 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 2e-06 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 2e-06 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 2e-06 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 2e-06 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 2e-06 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 2e-06 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 2e-06 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 2e-06 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 2e-06 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-06 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 3e-06 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 3e-06 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-06 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 3e-06 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 3e-06 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 3e-06 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 3e-06 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 3e-06 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 3e-06 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-06 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 3e-06 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 3e-06 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-06 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 3e-06 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 3e-06 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 3e-06 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 3e-06 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 3e-06 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 3e-06 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 3e-06 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 3e-06 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 3e-06 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 3e-06 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 3e-06 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 4e-06 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 4e-06 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 4e-06 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 4e-06 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 4e-06 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 4e-06 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 4e-06 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 4e-06 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 4e-06 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 4e-06 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 4e-06 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 4e-06 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 4e-06 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 4e-06 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 4e-06 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 4e-06 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 4e-06 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-06 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 4e-06 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 5e-06 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 5e-06 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 5e-06 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 5e-06 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 6e-06 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 6e-06 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 6e-06 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 6e-06 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 6e-06 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 6e-06 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 6e-06 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 6e-06 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 6e-06 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 6e-06 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 6e-06 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 6e-06 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 6e-06 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 7e-06 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 7e-06 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 7e-06 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 7e-06 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 7e-06 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 8e-06 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 8e-06 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 8e-06 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 8e-06 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 8e-06 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 9e-06 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 9e-06 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 9e-06 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 9e-06 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 9e-06 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 1e-05 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 1e-05 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-05 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 1e-05 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-05 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 1e-05 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 1e-05 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 1e-05 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 1e-05 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 2e-05 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 2e-05 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 2e-05 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 2e-05 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-05 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 2e-05 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-05 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-05 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 2e-05 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 3e-05 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 3e-05 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 3e-05 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-05 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 3e-05 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 3e-05 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-05 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-05 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-05 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 3e-05 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 3e-05 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-05 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 4e-05 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 4e-05 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 4e-05 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 4e-05 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 4e-05 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 5e-05 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 5e-05 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 5e-05 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 5e-05 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 6e-05 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 6e-05 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 6e-05 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 7e-05 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 7e-05 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 7e-05 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 7e-05 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 7e-05 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 7e-05 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 7e-05 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 8e-05 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 8e-05 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 1e-04 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-04 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 1e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 1e-04 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 1e-04 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-04 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 2e-04 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 2e-04 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 2e-04 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 2e-04 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 2e-04 | ||
| 4hgl_A | 330 | Crystal Structure Of Ck1g3 With Compound 1 Length = | 2e-04 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 2e-04 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 2e-04 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-04 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 3e-04 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 3e-04 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 3e-04 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 3e-04 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 3e-04 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 4e-04 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 4e-04 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 4e-04 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 4e-04 | ||
| 2cmw_A | 310 | Structure Of Human Casein Kinase 1 Gamma-1 In Compl | 4e-04 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 4e-04 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 4e-04 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 4e-04 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 4e-04 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 4e-04 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 4e-04 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 4e-04 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 4e-04 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 4e-04 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 4e-04 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 4e-04 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 4e-04 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 4e-04 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 4e-04 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 5e-04 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 5e-04 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 5e-04 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 5e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 5e-04 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 6e-04 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 6e-04 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 6e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 6e-04 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 7e-04 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 7e-04 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 7e-04 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 7e-04 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 8e-04 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 8e-04 | ||
| 2v62_A | 345 | Structure Of Vaccinia-Related Kinase 2 Length = 345 | 8e-04 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 9e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2 Length = 345 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1019 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-161 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-150 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-19 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-08 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 1e-100 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-67 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-91 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 6e-78 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 6e-68 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 5e-48 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-07 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-91 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 9e-79 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 8e-58 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-44 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-87 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-83 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 9e-80 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 4e-62 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 5e-48 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-41 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-24 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-24 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 7e-82 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-81 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 6e-38 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 3e-22 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-76 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 3e-67 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-57 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 9e-51 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-38 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-21 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-73 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 3e-73 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-53 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 4e-39 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-26 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-23 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-65 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 3e-60 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 1e-55 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 1e-53 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-53 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 7e-44 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 8e-44 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-31 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-19 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-17 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 2e-52 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 3e-51 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 6e-51 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-50 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 5e-49 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-44 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 1e-50 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-49 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-46 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 4e-16 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 6e-48 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 8e-48 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 1e-47 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 3e-44 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-31 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 3e-47 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 7e-47 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 1e-46 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 2e-46 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 2e-46 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 4e-46 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 6e-46 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-44 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-41 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-40 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-28 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 7e-21 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-17 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 7e-44 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 8e-44 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 6e-43 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-19 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-11 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-07 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 5e-43 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-42 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 5e-42 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-37 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-33 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-26 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-25 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 5e-38 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 6e-37 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 9e-35 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 3e-33 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-26 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-26 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-25 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 4e-22 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-18 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 8e-38 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 1e-37 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-34 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 9e-31 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 9e-25 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-11 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 8e-37 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 9e-37 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-29 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 8e-26 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-18 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-36 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-35 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 3e-31 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-30 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 5e-23 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 9e-11 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 5e-36 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-35 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 4e-30 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 7e-24 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-15 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 8e-04 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 1e-35 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 3e-35 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 4e-34 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 4e-34 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 4e-34 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 5e-34 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 5e-34 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 9e-33 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 8e-32 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-30 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-29 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-23 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 4e-23 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-21 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 6e-34 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-33 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 9e-24 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-16 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-13 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-08 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 8e-34 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-33 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 2e-33 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 2e-33 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 3e-33 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 4e-33 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 4e-33 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 5e-33 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 6e-33 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 6e-33 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 7e-33 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 7e-28 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 7e-26 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-24 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-19 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-32 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-31 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-28 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 4e-24 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 3e-23 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 9e-23 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 1e-32 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 1e-32 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 2e-32 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 2e-32 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 2e-32 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 3e-32 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 3e-32 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 3e-32 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 4e-32 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 4e-32 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 4e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-27 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-25 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-20 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 5e-15 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 4e-32 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 5e-32 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 7e-32 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 7e-32 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 9e-32 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 1e-31 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 1e-31 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 2e-31 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 2e-31 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 3e-31 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 3e-31 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 1e-30 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 1e-30 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 2e-30 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 2e-30 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 3e-30 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 5e-30 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 7e-30 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 1e-29 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 2e-29 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 2e-29 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 5e-29 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 7e-29 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 7e-29 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 1e-28 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 1e-28 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 2e-28 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 2e-28 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 2e-28 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 3e-28 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 4e-28 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 4e-28 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 4e-28 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 5e-28 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 6e-28 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 1e-27 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 1e-27 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 1e-27 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-27 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-27 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 6e-27 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 5e-23 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 3e-22 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-20 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-19 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 2e-27 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 3e-27 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 4e-27 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-26 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 7e-23 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 7e-21 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-17 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-16 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 2e-16 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 4e-27 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-27 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 6e-27 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 3e-25 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 3e-09 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 6e-27 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 9e-27 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-25 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 7e-23 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-20 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 8e-06 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 1e-26 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 6e-26 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 8e-26 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 1e-25 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 2e-25 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-25 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 6e-23 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 5e-19 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 8e-19 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 7e-09 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 2e-25 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 3e-25 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 3e-25 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 7e-25 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 1e-24 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 2e-24 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 7e-24 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-23 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-21 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-21 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-15 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-09 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-04 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 7e-24 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 9e-24 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 7e-20 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-19 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-18 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 2e-17 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-15 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 1e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-23 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-22 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 4e-17 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-16 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-14 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 4e-13 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-09 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-23 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-21 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 5e-18 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-17 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-17 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 6e-14 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 8e-13 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-23 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 1e-20 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-19 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 6e-16 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-09 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 2e-23 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 3e-23 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-21 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 7e-20 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-18 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-17 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 7e-16 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-10 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 4e-23 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 4e-23 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-19 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 6e-19 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 5e-17 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-15 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-13 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-07 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 1e-22 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 3e-22 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 6e-22 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 9e-22 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 2e-21 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 3e-21 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 3e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 2e-20 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-19 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-17 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 9e-15 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-11 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 7e-11 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-06 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 4e-21 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 6e-21 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 7e-21 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 1e-20 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 1e-20 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-20 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 2e-20 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 2e-20 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 2e-20 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-14 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-11 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-08 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-04 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 6e-20 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 6e-20 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 6e-20 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 6e-20 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 3e-18 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 8e-07 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 6e-20 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 7e-20 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 8e-20 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 8e-20 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 1e-19 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 1e-19 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 1e-19 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 1e-19 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 2e-19 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 2e-19 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 2e-19 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 2e-19 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 2e-19 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 2e-19 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 3e-19 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 3e-19 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 3e-19 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 3e-19 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 4e-19 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 4e-19 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 4e-19 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 5e-19 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 5e-19 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 5e-19 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 8e-19 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 8e-19 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 1e-18 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 1e-18 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 1e-18 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 2e-18 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 2e-18 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 2e-18 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 3e-18 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 3e-18 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 4e-18 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 5e-18 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 5e-18 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 6e-18 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 6e-18 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-14 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 9e-13 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-12 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-11 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 8e-08 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 9e-18 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 1e-17 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 1e-17 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-17 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 1e-17 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 2e-17 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 2e-17 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 2e-17 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 3e-17 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 5e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 5e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-14 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 2e-14 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 4e-07 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 6e-17 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 7e-17 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 9e-17 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 6e-16 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 9e-11 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 1e-10 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 6e-06 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 9e-17 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 1e-16 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 1e-16 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 1e-16 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 1e-16 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 2e-16 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 2e-16 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 3e-16 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 4e-16 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 5e-16 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 6e-16 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 3e-15 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-13 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 4e-13 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-11 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 3e-04 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 6e-16 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 7e-16 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 8e-16 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 1e-15 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 1e-15 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 1e-15 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 1e-15 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 1e-15 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 1e-15 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 2e-15 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 2e-15 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 2e-15 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 2e-15 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 3e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 4e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-14 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-06 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 5e-15 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 8e-14 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 3e-10 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 6e-07 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 5e-15 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 7e-15 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-14 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-11 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-09 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 5e-09 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 1e-14 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 2e-14 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 2e-14 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 2e-14 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 4e-14 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 6e-14 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 7e-14 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 9e-14 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 1e-13 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 1e-13 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 1e-13 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 1e-13 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 1e-13 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-08 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-07 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 4e-05 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 2e-13 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 4e-13 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 6e-13 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 6e-13 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 6e-13 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-08 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-04 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 8e-13 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 1e-12 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 1e-12 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-12 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 4e-11 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 4e-10 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 8e-07 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 3e-12 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 3e-12 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 4e-12 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 6e-12 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 7e-12 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 7e-12 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 8e-12 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 1e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-07 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 1e-11 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 4e-11 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 5e-11 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 3e-10 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 4e-10 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 5e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-05 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-05 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 5e-10 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 3e-09 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 1e-08 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 6e-10 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 8e-10 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 1e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 8e-09 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 4e-07 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-04 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-09 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 5e-07 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 9e-04 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 6e-09 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 4e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-07 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-05 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-04 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 9e-04 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 1e-08 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 2e-08 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-06 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-06 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-04 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-08 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 2e-04 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 3e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 7e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 3e-04 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 3e-08 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 6e-08 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 9e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 9e-08 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 1e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-07 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 1e-07 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 2e-07 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 4e-07 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 2e-05 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 6e-05 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 1e-04 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 3e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 5e-06 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-05 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 4e-07 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 4e-07 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 2e-04 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 5e-07 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 5e-07 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 3e-05 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 4e-04 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 6e-07 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 2e-04 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 6e-07 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 6e-04 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 5e-06 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 1e-05 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 3e-04 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 4e-05 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 3e-04 | |
| 4fev_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 5e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 494 bits (1273), Expect = e-161
Identities = 157/574 (27%), Positives = 262/574 (45%), Gaps = 24/574 (4%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
L + + + + P +G+ S L+ +D++ N G+ + + L L +++N F G
Sbjct: 203 EFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG 261
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
IP +L N G+I + L L ++ NH G +P G+ S+
Sbjct: 262 PIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
Query: 198 LKVINVEENRLSGRIP-NTLGQLRNSFYLNIAGNQFSGNVPPSIYNLS-SLELLYLRGNR 255
L+ + + N SG +P +TL ++R L+++ N+FSG +P S+ NLS SL L L N
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 256 LIGSLPIDIG-LTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFS 314
G + ++ L + N F+G IP + SN S LV L L+ N SG +P +
Sbjct: 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439
Query: 315 RLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTT 374
L L L L N L G + L L L L N G +P ++N +
Sbjct: 440 SLSKLRDLKLWLNML-EG-----EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 493
Query: 375 VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEG 434
I++ N+++G IP IG L NL + N +G IP E+G +L L L+ NL G
Sbjct: 494 W-ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552
Query: 435 SIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQN--KLTGALPKQIFNIT 492
+IP ++ + + +N++ G + N + + N + G +Q+ ++
Sbjct: 553 TIPAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS 608
Query: 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNS 552
T + ++++ N +++ LD+S N +SG IP + + L LNL +N
Sbjct: 609 TRN-PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 553 FRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFS 612
G IP + L+ + +LDLSSN L G+IP+ + L+ L +++S+N+ G +P G F
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 727
Query: 613 NKTRISLSGNGKLCGGLYELQLPSCGSKGSRKST 646
N LCG LP C +
Sbjct: 728 TFPPAKFLNNPGLCG----YPLPRCDPSNADGYA 757
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 465 bits (1198), Expect = e-150
Identities = 184/657 (28%), Positives = 297/657 (45%), Gaps = 38/657 (5%)
Query: 23 SYAFAGVPSNETDRLALLAIKSQLHDPLGVTSSWNNSINLCQWTGVTCGHRHQRVTKLYL 82
S+ + S + L++ K L D + W+++ N C + GVTC R +VT + L
Sbjct: 1 SFQASPSQSLYREIHQLISFKDVLPDK-NLLPDWSSNKNPCTFDGVTC--RDDKVTSIDL 57
Query: 83 RNQSI---GGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKI 139
++ + +S + +L+ L + L++++ G++ + L +L L+ NS SG +
Sbjct: 58 SSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPV 116
Query: 140 PT--NLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASI---GN 194
T +L CS L N L + G LE L ++ N ++G
Sbjct: 117 TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDG 176
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGN 254
LK + + N++SG + + + N +L+++ N FS + P + + S+L+ L + GN
Sbjct: 177 CGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDISGN 233
Query: 255 RLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPIN-F 313
+L G I T +L I+ N F GPIP +L L L N F+G++P
Sbjct: 234 KLSGDFSRAIS-TCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLS 290
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITP-LTNCSKLIALGLYGNRFGGVLP-HSIANLS 371
L+ L L+GN+ GA + P +CS L +L L N F G LP ++ +
Sbjct: 291 GACDTLTGLDLSGNHF-YGA------VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMR 343
Query: 372 TTTVQINMGRNQISGTIPSGIGNL-VNLNGFGIDLNQLTGTIPHEIGK--LTNLQLLYLD 428
V +++ N+ SG +P + NL +L + N +G I + + LQ LYL
Sbjct: 344 GLKV-LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 429 FNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQI 488
N G IP +L N + L L L NYL G IPSSLG+ L L + N L G +P+++
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 489 FNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNL 548
+ TL L L N L +P + N NL + +S N+++GEIP + +L L L
Sbjct: 463 MYVKTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521
Query: 549 SYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTK 608
S NSF G IP L +S+ LDL++N +G IP + S I++N GK
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYVY 577
Query: 609 -GVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILL 664
K +GN G+ QL ++ T ++ T +
Sbjct: 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM 634
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 1e-19
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 26/154 (16%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
+ ++ GG SP N + +D++ N G IP E+G + L L L +N S
Sbjct: 610 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 669
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
G IP + L L ++ N L G++P ++ L+
Sbjct: 670 GSIPDEVGDLRG-------------------------LNILDLSSNKLDGRIPQAMSALT 704
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGN 230
+L I++ N LSG IP GQ N
Sbjct: 705 MLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNN 737
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 2e-08
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
+ L + + G + +G++ +L +++L N+ G+IP EVG L L+ L L++N
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 135 FSGKIPTNLSGCSNLINF-LAHGNNLVGQI 163
G+IP +S + L L++ NNL G I
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSN-NNLSGPI 720
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = e-100
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 14/308 (4%)
Query: 337 LDFITPLTNCSKL----IALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGT--IPS 390
L L N + L + GVL + +++ + IPS
Sbjct: 12 LQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVN-NLDLSGLNLPKPYPIPS 70
Query: 391 GIGNLVNLNGFGI-DLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTEL 449
+ NL LN I +N L G IP I KLT L LY+ + G+IP L + L L
Sbjct: 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130
Query: 450 ELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSL 509
+ N L G +P S+ + +L+ + N+++GA+P + + L + +S N L +
Sbjct: 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190
Query: 510 PLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV 569
P NL NL +D+SRN + G+ + + + ++L+ NS + + K++
Sbjct: 191 PPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNG 248
Query: 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGL 629
LDL +N + G +P+ L L FL LN+S N+ G++P G + + N LCG
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS- 307
Query: 630 YELQLPSC 637
LP+C
Sbjct: 308 ---PLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 227 bits (581), Expect = 3e-67
Identities = 79/347 (22%), Positives = 129/347 (37%), Gaps = 68/347 (19%)
Query: 32 NETDRLALLAIKSQLHDPLGVTSSWNNSINLCQ--WTGVTCGHRHQ--RVTKLYLRNQSI 87
N D+ ALL IK L +P SSW + + C W GV C Q RV L L ++
Sbjct: 4 NPQDKQALLQIKKDLGNP-TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 88 GGILS---------------------------PHVGNLSFLRLIDLADNNFYGNIPHEVG 120
P + L+ L + + N G IP +
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 121 RLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIA 180
++ L TL + N+ SG +P ++S NL+ GN + G I + G ++I+
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 181 DNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
N LTG++P + NL+ L +++ N L G G +N+ +++A N + ++ +
Sbjct: 183 RNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKV 240
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
+L L L N G +P + L L++
Sbjct: 241 GLSKNLNGLDL-------------------------RNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 301 NLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCS 347
+ N G++P LQ A N G+ PL C+
Sbjct: 276 SFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGS--------PLPACT 313
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 304 bits (780), Expect = 2e-91
Identities = 97/611 (15%), Positives = 189/611 (30%), Gaps = 84/611 (13%)
Query: 35 DRLALLAIKSQLHDP--------LGVTSSWNNSINLCQWT---GVTCGHRHQRVTKLYLR 83
D LAL I L+ ++WN + L W GV+ + RVT L L
Sbjct: 31 DYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLN-SNGRVTGLSLE 89
Query: 84 NQSIGGILSPHVGNLSFLRLIDLADNNFYGN----IPHEVGRLSRLDTLMLANNSFSGKI 139
G + +G L+ L ++ L + N P + + +
Sbjct: 90 GFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTF 149
Query: 140 PTNLSG--CSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
S+LI + + I + ++ ++ N++T + ++ L+
Sbjct: 150 VDYDPREDFSDLIKDCINSDPQQKSIKKSSR-ITLKDTQIGQLSNNITF-VSKAVMRLTK 207
Query: 198 LKVINVEENRLSG-------------------RIPNTLGQLRNSFYLNIAGNQFSGNVPP 238
L+ + + L++ + + +P
Sbjct: 208 LRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPT 267
Query: 239 SIYNLSSLELLYLRGNRLIGSLPIDIGLT-------LPKLTNFVIAENNF-SGPIPNSFS 290
+ L ++L+ + NR I + K+ I NN + P+ S
Sbjct: 268 FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQ 327
Query: 291 NTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITP--LTNCSK 348
L ML+ N GK+P F L+ L LA N + I +
Sbjct: 328 KMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE--------IPANFCGFTEQ 378
Query: 349 LIALGLYGNRFGGVLPH-SIANLSTTTVQINMGRNQISG-------TIPSGIGNLVNLNG 400
+ L N+ + ++S + I+ N+I + +N++
Sbjct: 379 VENLSFAHNKLKYIPNIFDAKSVSVMSA-IDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437
Query: 401 FGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEG-------SIPFSLGNLTLLTELELQS 453
+ NQ++ + L + L N+L + N LLT ++L+
Sbjct: 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRF 497
Query: 454 NYLQGNIPS-SLGNCRSLLSLNVSQNKLTGALPKQIFNITTL-----SLYLDLSNNFLND 507
N L L+ +++S N + P Q N +TL D N
Sbjct: 498 NKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLR 556
Query: 508 SLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSV 567
P + +L +L I N + + + ++ L++ N +
Sbjct: 557 EWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEA 613
Query: 568 KVLDLSSNNLS 578
+ L +
Sbjct: 614 GMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 267 bits (684), Expect = 6e-78
Identities = 80/464 (17%), Positives = 154/464 (33%), Gaps = 51/464 (10%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG----RIPNTLGQLRNSFYLNIA 228
R+ LS+ +G++P +IG L+ L+V+ + + P + +
Sbjct: 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKM 141
Query: 229 GNQFSGNVPPSI--YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIP 286
+ + S L + + S+ +TL K T NN + +
Sbjct: 142 RMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL-KDTQIGQLSNNITF-VS 199
Query: 287 NSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNC 346
+ + L + + F + +N + N
Sbjct: 200 KAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT-----------EDLKWDNL 248
Query: 347 SKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQI--------SGTIPSGIGNLVNL 398
L + +Y LP + L + IN+ N+ + +
Sbjct: 249 KDLTDVEVYNCPNLTKLPTFLKALPEMQL-INVACNRGISGEQLKDDWQALADAPVGEKI 307
Query: 399 NGFGIDLNQL-TGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ 457
I N L T + + K+ L +L +N LEG +P + G+ L L L N +
Sbjct: 308 QIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT 366
Query: 458 GNIPSSLGNCRSLLSLNVSQNKLTGALPK--QIFNITTLSLYLDLSNNFLN-------DS 508
+ G + +L+ + NKL +P +++ +S +D S N + D
Sbjct: 367 EIPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMS-AIDFSYNEIGSVDGKNFDP 424
Query: 509 LPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRG-------GIPLSL 561
L N+ +++S NQ+S S + L +NL N +
Sbjct: 425 LDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENF 484
Query: 562 SSLKSVKVLDLSSNNLSGQIPKYLE--NLSFLEYLNISSNHFEG 603
+ + +DL N L+ + L +L +++S N F
Sbjct: 485 KNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK 527
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 239 bits (611), Expect = 6e-68
Identities = 66/426 (15%), Positives = 140/426 (32%), Gaps = 41/426 (9%)
Query: 202 NVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLP 261
N E + + +L L++ G SG VP +I L+ LE+L L + +
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 262 IDIGLTLPKLTNFVIAE---NNFSGPIPNSFS--NTSNLVMLDLNLNLFSGKVPINFSRL 316
+ + + + ++ + + S+L+ +N + + +
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182
Query: 317 QNLSWLLLAGNNLGNGAANDLDFITP-LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTV 375
+ + NN+ F++ + +KL + + F
Sbjct: 183 LKDTQIGQLSNNIT--------FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENE---- 230
Query: 376 QINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLL--- 432
N Q T NL +L + +P + L +QL+ + N
Sbjct: 231 --NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG 288
Query: 433 -----EGSIPFSLGNLTLLTELELQSNYLQ-GNIPSSLGNCRSLLSLNVSQNKLTGALPK 486
+ + + + N L+ + +SL + L L N+L G
Sbjct: 289 EQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG-KLP 347
Query: 487 QIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSA--CTSLE 544
+ L+ L+L+ N + + G + + L + N++ IP A + +
Sbjct: 348 AFGSEIKLA-SLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMS 405
Query: 545 YLNLSYNSFRG-------GIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNIS 597
++ SYN + + +V ++LS+N +S + S L +N+
Sbjct: 406 AIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLM 465
Query: 598 SNHFEG 603
N
Sbjct: 466 GNMLTE 471
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 5e-48
Identities = 48/295 (16%), Positives = 101/295 (34%), Gaps = 23/295 (7%)
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISG----TIPSGIGNLVNL 398
L + ++ L L G G +P +I L+ V + +G + P GI ++
Sbjct: 77 LNSNGRVTGLSLEGFGASGRVPDAIGQLTELEV-LALGSHGEKVNERLFGPKGISANMSD 135
Query: 399 NGFGIDLNQLTGTIPHEIGKLTNLQLLYLDF--NLLEGSIPFSLGNLTLLTELELQSNYL 456
T + L+ + + SI S T++ SN +
Sbjct: 136 EQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI 195
Query: 457 QGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNL 516
+ ++ L + + NI + + L+ NL
Sbjct: 196 TF-VSKAVMRLTKLRQFYMGNSPFVA------ENICEAWENENSEYAQQYKTEDLKWDNL 248
Query: 517 QNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG--------IPLSLSSLKSVK 568
++L ++++ ++P L A ++ +N++ N G + ++
Sbjct: 249 KDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQ 308
Query: 569 VLDLSSNNL-SGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
++ + NNL + + L+ + L L N EGK+P G ++L+ N
Sbjct: 309 IIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-07
Identities = 18/92 (19%), Positives = 33/92 (35%)
Query: 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVP 606
N + + +SL+S V L L SG++P + L+ LE L + S+ +
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 607 TKGVFSNKTRISLSGNGKLCGGLYELQLPSCG 638
G +S K+ + +
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDP 154
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 3e-91
Identities = 114/546 (20%), Positives = 209/546 (38%), Gaps = 37/546 (6%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
L L + + S + L+++DL+ LS L TL+L N
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTG-QLPASIGNL 195
SG S+L +A NL IG + L++L++A N + +LP NL
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIG-HLKTLKELNVAHNLIQSFKLPEYFSNL 148
Query: 196 SVLKVINVEENRLSGRIPNTLGQLRN----SFYLNIAGNQFSGNVPPSIYNLSSLELLYL 251
+ L+ +++ N++ L L + L+++ N + + P + L L L
Sbjct: 149 TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTL 207
Query: 252 RGNRLIGSLPIDIGLTLPKLT------NFVIAENNFSGPIPNSFSNTSNLVMLDLNLN-- 303
R N ++ L L E N ++ NL + + L
Sbjct: 208 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267
Query: 304 -LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGV 362
+ + F+ L N+S L + + + L L +FG
Sbjct: 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE--------RVKDFSYNFGWQHLELVNCKFGQF 319
Query: 363 LPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLT--GTIPHEIGKLT 420
+ +L + G +L +L + N L+ G T
Sbjct: 320 PTLKLKSLK------RLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTT 373
Query: 421 NLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSS-LGNCRSLLSLNVSQNK 479
+L+ L L FN + + + L L L+ Q + L+ S + R+L+ L++S
Sbjct: 374 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 432
Query: 480 LTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLS 538
A +++L L ++ N ++ ++ L+NL LD+S+ Q+ P +
Sbjct: 433 TRVAFNGIFNGLSSLE-VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491
Query: 539 ACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENL-SFLEYLNIS 597
+ +SL+ LN+S+N+F L S++VLD S N++ + L++ S L +LN++
Sbjct: 492 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 551
Query: 598 SNHFEG 603
N F
Sbjct: 552 QNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 268 bits (687), Expect = 9e-79
Identities = 105/549 (19%), Positives = 182/549 (33%), Gaps = 39/549 (7%)
Query: 105 DLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIA 164
+ NFY IP + L L+ N + L +
Sbjct: 13 QCMELNFY-KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED 69
Query: 165 ANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFY 224
+ L L + N + + LS L+ + E L+ +G L+
Sbjct: 70 GAYQ-SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKE 128
Query: 225 LNIAGNQF-SGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVI----AEN 279
LN+A N S +P NL++LE L L N++ D+ L ++ + + N
Sbjct: 129 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR-VLHQMPLLNLSLDLSLN 187
Query: 280 NFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP----INFSRLQNLSWLLLAGNNLGNGAAN 335
+ P +F L L L N S V + L+ +L N GN
Sbjct: 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 246
Query: 336 DLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP------ 389
D + L N + Y + + + L+ + ++ I
Sbjct: 247 DKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSS-FSLVSVTIERVKDFSYNFG 305
Query: 390 -----------SGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLL--EGSI 436
L + + G L +L+ L L N L +G
Sbjct: 306 WQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCC 365
Query: 437 PFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL 496
S T L L+L N + + S+ L L+ + L +F +
Sbjct: 366 SQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424
Query: 497 YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI-PATLSACTSLEYLNLSYNSFRG 555
YLD+S+ + L +L L ++ N P + +L +L+LS
Sbjct: 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 484
Query: 556 GIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPT--KGVFSN 613
P + +SL S++VL++S NN + L+ L+ L+ S NH + S+
Sbjct: 485 LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSS 544
Query: 614 KTRISLSGN 622
++L+ N
Sbjct: 545 LAFLNLTQN 553
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 8e-58
Identities = 76/507 (14%), Positives = 165/507 (32%), Gaps = 44/507 (8%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNF-YGNIPHEVGRLSRLDTLMLANNSFS 136
KL ++ + + +G+L L+ +++A N +P L+ L+ L L++N
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Query: 137 GKIPTNLSGCSNLINFLAH---GNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA-SI 192
T+L + N + I +RL KL++ +N + + I
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCI 221
Query: 193 GNLSVLKVINVEENRLSGR------IPNTLGQLRNSFYLNIAGNQ---FSGNVPPSIYNL 243
L+ L+V + + L L N + ++ L
Sbjct: 222 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCL 281
Query: 244 SSLELLYLRGNRLIGSLPIDIGLTLPKL----------------TNFVIAENNFSGPIPN 287
+++ L + L + + + G
Sbjct: 282 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 341
Query: 288 SFSNTSNLVMLDLNLN--LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTN 345
S + +L LDL+ N F G + +L +L L+ N + + +
Sbjct: 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-------ITMSSNFLG 394
Query: 346 CSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDL 405
+L L + + S+ + +++ L +L +
Sbjct: 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 454
Query: 406 NQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSL 464
N +I +L NL L L LE P + +L+ L L + N
Sbjct: 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 514
Query: 465 GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLE--VGNLQNLVEL 522
SL L+ S N + + +++ + + +L+L+ N + + + +++ +L
Sbjct: 515 KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQL 574
Query: 523 DISRNQVSGEIPATLSACTSLEYLNLS 549
+ ++ P+ + LN++
Sbjct: 575 LVEVERMECATPSDKQG-MPVLSLNIT 600
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 2e-44
Identities = 76/420 (18%), Positives = 137/420 (32%), Gaps = 50/420 (11%)
Query: 238 PSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM 297
P + + ++ + N +P ++ N ++ N SF + L +
Sbjct: 2 PCVEVVPNITYQCMELN--FYKIPDNL---PFSTKNLDLSFNPLRHLGSYSFFSFPELQV 56
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
LDL+ + L +LS L+L GN + + A S L L
Sbjct: 57 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS------GLSSLQKLVAVET 110
Query: 358 RFGGVLPHSIANLSTTTVQINMGRNQI-SGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEI 416
+ I +L T +N+ N I S +P NL NL + N++ ++
Sbjct: 111 NLASLENFPIGHLKTLKE-LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169
Query: 417 GKLTNLQL----LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPS-SLGNCRSLL 471
L + L L L N + P + + L +L L++N+ N+ + L
Sbjct: 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTCIQGLAGLE 228
Query: 472 SLNVSQNKLTGALPKQIFNITTLS-------LYLDLS-NNFLNDSLPLEVGNLQNLVELD 523
+ + + F+ + L L+ ++ D + L N+
Sbjct: 229 VHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288
Query: 524 ISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLK------------------ 565
+ + S ++L L F L L SLK
Sbjct: 289 LVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346
Query: 566 -SVKVLDLSSNNLS--GQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
S++ LDLS N LS G + + L+YL++S N + +
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHS 406
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 293 bits (753), Expect = 3e-87
Identities = 112/570 (19%), Positives = 196/570 (34%), Gaps = 50/570 (8%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
+T L L + + + + + S L +D+ N P +L L L L +N S
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
+ C+NL N++ L L ++ N L+ + L
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFV-KQKNLITLDLSHNGLSSTKLGTQVQLE 145
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSF--YLNIAGNQFSGNVPPSIYNLSSLELLYLRGN 254
L+ + + N++ L NS L ++ NQ P + + L L+L
Sbjct: 146 NLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNV 205
Query: 255 RLIGSLPIDI--GLTLPKLTNFVIAENNFSGPIPNSFSN--TSNLVMLDLNLNLFSGKVP 310
+L SL + L + N ++ + S +F +NL MLDL+ N +
Sbjct: 206 QLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
+F+ L L + L NN+ + ++ L + L L + +
Sbjct: 266 DSFAWLPQLEYFFLEYNNIQHLFSHS------LHGLFNVRYLNLKRSFTKQSISL----- 314
Query: 371 STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
+ L L ++ N + G + L NL+ L L +
Sbjct: 315 -----------ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNS 363
Query: 431 LLEGSIP----FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPK 486
F + L L L N + + L L++ N++ L
Sbjct: 364 FTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423
Query: 487 QIF-NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG--EIPATLSACTSL 543
Q + + + + LS N + +L L + R + P+ +L
Sbjct: 424 QEWRGLENIF-EIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482
Query: 544 EYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLS--------GQIPKYLENLSFLEYLN 595
L+LS N+ L L+ +++LDL NNL+ G +L+ LS L LN
Sbjct: 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542
Query: 596 ISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
+ SN F+ VF + I L N
Sbjct: 543 LESNGFDE--IPVEVFKDLFELKIIDLGLN 570
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 2e-83
Identities = 107/591 (18%), Positives = 201/591 (34%), Gaps = 43/591 (7%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
L L++ + + + L + L N+ + + L TL L++N S
Sbjct: 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGY-NWMRLEKLSIADNHLTGQLPASIGNLS 196
NL L N + + + L+KL ++ N + P +
Sbjct: 136 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIG 195
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSF---YLNIAGNQFSGNVPPSIYNL--SSLELLYL 251
L + + +L + L + L+++ +Q S + L ++L +L L
Sbjct: 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 252 RGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPI 311
N L LP+L F + NN +S N+ L+L + + +
Sbjct: 256 SYNNLNVVGNDSFA-WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISL 314
Query: 312 N---------FSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNR--FG 360
F L+ L L + N++ +N T L L L +
Sbjct: 315 ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF------TGLINLKYLSLSNSFTSLR 368
Query: 361 GVLPHSIANLSTTTVQ-INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIP-HEIGK 418
+ + +L+ + + +N+ +N+IS L +L + LN++ + E
Sbjct: 369 TLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRG 428
Query: 419 LTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQG--NIPSSLGNCRSLLSLNVS 476
L N+ +YL +N S + L L L+ L+ + PS R+L L++S
Sbjct: 429 LENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488
Query: 477 QNKLTGALPKQIFNITTLSLYLDLSNNFLND--------SLPLEVGNLQNLVELDISRNQ 528
N + + + L LDL +N L + L +L L++ N
Sbjct: 489 NNNIANINDDMLEGLEKL-EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG 547
Query: 529 VSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLE-N 587
L+ ++L N+ ++ S+K L+L N ++ K
Sbjct: 548 FDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 607
Query: 588 LSFLEYLNISSNHFEGKVPTKGVF-----SNKTRISLSGNGKLCGGLYELQ 633
L L++ N F+ + F T I + LC
Sbjct: 608 FRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYH 658
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 9e-80
Identities = 96/526 (18%), Positives = 176/526 (33%), Gaps = 53/526 (10%)
Query: 98 LSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGN 157
+ + +++L N R S+L +L + N+ S P
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPM--------- 74
Query: 158 NLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLG 217
L+ L++ N L+ + + L +++ N + N
Sbjct: 75 ----------------LKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFV 118
Query: 218 QLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIG-LTLPKLTNFVI 276
+ +N L+++ N S + L +L+ L L N++ ++ L +
Sbjct: 119 KQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178
Query: 277 AENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFS---RLQNLSWLLLAGNNLGNGA 333
+ N P F L L LN + ++ L L+ + L +
Sbjct: 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTS 238
Query: 334 ANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIG 393
+ + L L L N V S A L + N I +
Sbjct: 239 NTTFLGL----KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEY-FFLEYNNIQHLFSHSLH 293
Query: 394 NLV---------NLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLT 444
L + I L L L L+ L ++ N + G L
Sbjct: 294 GLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI 353
Query: 445 LLTELELQSNYLQ-----GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLD 499
L L L +++ SL + L LN+++NK++ + L LD
Sbjct: 354 NLKYLSLSNSFTSLRTLTNETFVSLAH-SPLHILNLTKNKISKIESDAFSWLGHLE-VLD 411
Query: 500 LSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRG--G 556
L N + L + L+N+ E+ +S N+ + + SL+ L L + +
Sbjct: 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 471
Query: 557 IPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
P L+++ +LDLS+NN++ LE L LE L++ N+
Sbjct: 472 SPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 223 bits (571), Expect = 4e-62
Identities = 79/390 (20%), Positives = 139/390 (35%), Gaps = 26/390 (6%)
Query: 245 SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNL 304
S E+ +L +P D+ +T + N +F+ S L LD+ N
Sbjct: 5 SHEVADCSHLKL-TQVPDDL---PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 305 FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLP 364
S P +L L L L N L + C+ L L L N +
Sbjct: 61 ISKLEPELCQKLPMLKVLNLQHNELSQLSDKT------FAFCTNLTELHLMSNSIQKIKN 114
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIG--KLTNL 422
+ +++ N +S T L NL + N++ E+ ++L
Sbjct: 115 NPFVKQKNLIT-LDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSL 173
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG---NCRSLLSLNVSQNK 479
+ L L N ++ P + L L L + L ++ L S+ +L++S ++
Sbjct: 174 KKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQ 233
Query: 480 LTGALPKQIFNITTLSL-YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLS 538
L+ + +L LDLS N LN L L + N + +L
Sbjct: 234 LSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH 293
Query: 539 ACTSLEYLNLSYNSFRGGI---------PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLS 589
++ YLNL + + I S LK ++ L++ N++ G L
Sbjct: 294 GLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI 353
Query: 590 FLEYLNISSNHFEGKVPTKGVFSNKTRISL 619
L+YL++S++ + T F + L
Sbjct: 354 NLKYLSLSNSFTSLRTLTNETFVSLAHSPL 383
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 5e-48
Identities = 85/444 (19%), Positives = 144/444 (32%), Gaps = 50/444 (11%)
Query: 71 GHRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLML 130
G + +T L L ++ + + L L L NN H + L + L L
Sbjct: 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 303
Query: 131 ANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA 190
+ I + +F LE L++ DN + G
Sbjct: 304 KRSFTKQSISLA--SLPKIDDFSFQWLK--------------CLEHLNMEDNDIPGIKSN 347
Query: 191 SIGNLSVLKVINVEENRLSGR--IPNTLGQLRNSF--YLNIAGNQFSGNVPPSIYNLSSL 246
L LK +++ + S R T L +S LN+ N+ S + L L
Sbjct: 348 MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHL 407
Query: 247 ELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFS 306
E+L L N + L L + ++ N + NSF+ +L L L
Sbjct: 408 EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK 467
Query: 307 G--KVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLP 364
P F L+NL+ L L+ NN+ N + L+ KL L L N
Sbjct: 468 NVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE------GLEKLEILDLQHNNLA---- 517
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQL 424
+ ++ G + L +L+ ++ N L L++
Sbjct: 518 -------------RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG-NCRSLLSLNVSQNKLTGA 483
+ L N L N L L LQ N + G R+L L++ N
Sbjct: 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624
Query: 484 LPKQIFNITTLSLYLDLSNNFLND 507
+I +++ ++ + +
Sbjct: 625 CE----SIAWFVNWINETHTNIPE 644
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 2e-41
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 13/264 (4%)
Query: 369 NLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLD 428
+L T +N+ NQ+ + L + N ++ P KL L++L L
Sbjct: 22 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81
Query: 429 FNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQI 488
N L + T LTEL L SN +Q + ++L++L++S N L+
Sbjct: 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ 141
Query: 489 FNITTLSLYLDLSNNFLNDSLP--LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYL 546
+ L L LSNN + L++ +L +L++S NQ+ P A L L
Sbjct: 142 VQLENLQ-ELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL 200
Query: 547 NLSYNSFRGGIPLSLS---SLKSVKVLDLSSNNLSGQIPKYLENLSF--LEYLNISSNHF 601
L+ + L + S++ L LS++ LS L + L L++S N+
Sbjct: 201 FLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL 260
Query: 602 EGKVPTKGVFSNKTR---ISLSGN 622
F+ + L N
Sbjct: 261 NV--VGNDSFAWLPQLEYFFLEYN 282
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-24
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 28/184 (15%)
Query: 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNK 479
+ ++ L +P L T +T L L N L+ ++ L SL+V N
Sbjct: 4 VSHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 480 LTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSA 539
++ L ++ L L L++ N++S T +
Sbjct: 61 ISK-LEPELC------------------------QKLPMLKVLNLQHNELSQLSDKTFAF 95
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
CT+L L+L NS + K++ LDLS N LS L L+ L +S+N
Sbjct: 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155
Query: 600 HFEG 603
+
Sbjct: 156 KIQA 159
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 3e-24
Identities = 34/157 (21%), Positives = 53/157 (33%), Gaps = 9/157 (5%)
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQ 528
S + S KLT +P + T L+L++N L L LD+ N
Sbjct: 5 SHEVADCSHLKLT-QVPDDLPTNIT---VLNLTHNQLRRLPAANFTRYSQLTSLDVGFNT 60
Query: 529 VSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENL 588
+S P L+ LNL +N + + ++ L L SN++
Sbjct: 61 ISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQ 120
Query: 589 SFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
L L++S N G + LS N
Sbjct: 121 KNLITLDLSHNGLSSTKL--GTQVQLENLQELLLSNN 155
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 267 bits (686), Expect = 7e-82
Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 35/316 (11%)
Query: 695 SYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK-GAFKSFVAECE 753
S EL A+ FS N++G+G FG VY+G L G LVAVK L R G F E E
Sbjct: 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVE 79
Query: 754 ALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQ 813
+ HRNL+++ C + + LVY YM NGS+ L + L +
Sbjct: 80 MISMAVHRNLLRLRGFC--MTP---TERLLVYPYMANGSVASCLRERPESQPP--LDWPK 132
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
R IA+ A + YLH HC P IIH D+K +N+LLD + A VGDFGLAK + D
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYK 187
Query: 874 ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF---NDGL 930
+T ++ ++GT+G++APEY ++S DV+ +G++LLE+ +R D +D +
Sbjct: 188 DTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 931 TIHEFAMKALPQ-RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSME 989
+ ++ L + ++ +VD L +E + +I + +LC+
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDL---------------QGNYKDEEVEQLIQVALLCTQS 291
Query: 990 SPIDRTLEMRNVVAKL 1005
SP++R M VV L
Sbjct: 292 SPMERPK-MSEVVRML 306
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 282 bits (722), Expect = 3e-81
Identities = 93/634 (14%), Positives = 200/634 (31%), Gaps = 99/634 (15%)
Query: 32 NETDRLALLAIKSQLH-----------DPLGVTSSWNNSINLCQW---TGVTCGHRHQRV 77
D AL AI L + + +WN + L W GV + + RV
Sbjct: 267 YIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRV 325
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
T L L G + +G L+ L+++ ++ + D +
Sbjct: 326 TGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRM 385
Query: 138 KIPTNLSG------CSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPAS 191
S+L+ + N + I + + ++ ++ N +T + +
Sbjct: 386 HYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRIS-LKDTQIGNLTNRITF-ISKA 443
Query: 192 IGNLSVLKVINVEENRLSG-------------------RIPNTLGQLRNSFYLNIAGNQF 232
I L+ L++I + + + L++ + +
Sbjct: 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503
Query: 233 SGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+P +Y+L L+ L + NR I + + T + +
Sbjct: 504 MTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR----------------LADDEDTG 547
Query: 293 SNLVMLDLNLNLFSG-KVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIA 351
+ + + N + ++ L L N + + KL
Sbjct: 548 PKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR--------HLEAFGTNVKLTD 599
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPS--GIGNLVNLNGFGIDLNQLT 409
L L N+ +P + + N++ IP+ ++ + N++
Sbjct: 600 LKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIG 657
Query: 410 GTIPH-----EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ------- 457
+ + K N + L +N ++ + ++ + L +N +
Sbjct: 658 SEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSL 717
Query: 458 GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL-YLDLSNNFLNDSLPLEVGNL 516
+ N L ++++ NKLT L T L +D+S N + S P + N
Sbjct: 718 KPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNS 775
Query: 517 QNLVELDISR------NQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVL 570
L I N++ + P ++ C SL L + N R + L + +L
Sbjct: 776 SQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKL--TPQLYIL 832
Query: 571 DLSSNNLS----GQIPKYLENLSFLEYLNISSNH 600
D++ N + Y+E ++ + + +
Sbjct: 833 DIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDI 866
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 6e-38
Identities = 44/296 (14%), Positives = 96/296 (32%), Gaps = 25/296 (8%)
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFG 402
L N ++ L L G G +P +I L+ V ++ G + + + + +
Sbjct: 319 LDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKV-LSFGTHSETVSGRLFGDEELTPDMSE 377
Query: 403 IDLNQLTGTIPHEIG----KLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQ--SNYL 456
+++ +L LL N P + L + ++ +N +
Sbjct: 378 ERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRI 437
Query: 457 QGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNL 516
I ++ L + + + T NI + ++ L NL
Sbjct: 438 TF-ISKAIQRLTKLQIIYFANSPFTY------DNIAVDWEDANSDYAKQYENEELSWSNL 490
Query: 517 QNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRG---------GIPLSLSSLKSV 567
++L ++++ ++P L L+ LN++ N + + +
Sbjct: 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI 550
Query: 568 KVLDLSSNNLSG-QIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
++ + NNL L+ + L L+ N + G T + L N
Sbjct: 551 QIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYN 605
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 3e-22
Identities = 28/283 (9%), Positives = 70/283 (24%), Gaps = 35/283 (12%)
Query: 369 NLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLD 428
N T + + + + I + + N +
Sbjct: 249 NKLTKDANVPIQLKETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFN-KE 307
Query: 429 FNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQI 488
++ L N +T L L +G +P ++G L L+ + T +
Sbjct: 308 LDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFG 367
Query: 489 FNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG----------------- 531
T + + + + + Q L D+ ++ ++
Sbjct: 368 DEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKD 427
Query: 532 -----------EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ 580
I + T L+ + + + F +
Sbjct: 428 TQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWED-----ANSDYAKQYEN 482
Query: 581 IPKYLENLSFLEYLNISSNHFEGKVPTK-GVFSNKTRISLSGN 622
NL L + + + ++P ++++ N
Sbjct: 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 261 bits (668), Expect = 4e-76
Identities = 109/539 (20%), Positives = 195/539 (36%), Gaps = 24/539 (4%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
L + I + L L +DL Y RLDTL+L N
Sbjct: 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
T LSG L + + + N LE L + NH++
Sbjct: 95 FMAETALSGPKALKHLFFIQTGISSIDFIPLH-NQKTLESLYLGSNHISSIKLPKGFPTE 153
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNS--FYLNIAGNQFSGNVPPSIYNLSSLELLYLRGN 254
LKV++ + N + + L+ + LN+ GN +G + P ++ + + L G
Sbjct: 154 KLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGT 212
Query: 255 RLIGSLPIDI-GLTLPKLTNFVIAENNFSGPIPNSFSNTS--NLVMLDLNLNLFSGKVPI 311
+ + + + T+ L + + P F ++ ++L + F
Sbjct: 213 QNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272
Query: 312 NFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLS 371
F L L L +L + L S L L L N+F + S +N
Sbjct: 273 TFHCFSGLQELDLTATHLSE-------LPSGLVGLSTLKKLVLSANKFENLCQISASNFP 325
Query: 372 TTTVQINMGRNQISGTIPSG-IGNLVNLNGFGIDLNQLT--GTIPHEIGKLTNLQLLYLD 428
+ T +++ N + +G + NL NL + + + ++ L++LQ L L
Sbjct: 326 SLTH-LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLS 384
Query: 429 FNLLEGSIPFSLGNLTLLTELELQSNYLQGNIP-SSLGNCRSLLSLNVSQNKLTGALPKQ 487
+N + L L+L L+ S N L LN+S + L + +
Sbjct: 385 YNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQL 444
Query: 488 IFNITTLSLYLDLSNNFLNDSLPLEVG---NLQNLVELDISRNQVSGEIPATLSACTSLE 544
+ L +L+L N + L L L +S +S ++ +
Sbjct: 445 FDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503
Query: 545 YLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEG 603
+++LS+N +LS LK + L+L+SN++S +P L LS +N+ N +
Sbjct: 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 236 bits (604), Expect = 3e-67
Identities = 91/536 (16%), Positives = 170/536 (31%), Gaps = 45/536 (8%)
Query: 98 LSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGN 157
+ ++ + N RL L L L
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHR--------- 82
Query: 158 NLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLG 217
L+ L + N L ++ LK + + +S L
Sbjct: 83 ----------------LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLH 126
Query: 218 QLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIA 277
+ L + N S P + L++L + N + D+ +L + TN +
Sbjct: 127 NQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMS-SLQQATNLSLN 185
Query: 278 -ENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP--INFSRLQNLSWLLLAGNNLGNGAA 334
N I +++ L+ + + S +Q+L +
Sbjct: 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDD----- 240
Query: 335 NDLDFITPLTNC-SKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIG 393
D+ C + ++ L + F + ++ S +++ +S +PSG+
Sbjct: 241 EDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQE-LDLTATHLS-ELPSGLV 298
Query: 394 NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSI-PFSLGNLTLLTELELQ 452
L L + N+ +L L + N + L NL L EL+L
Sbjct: 299 GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLS 358
Query: 453 SNYLQ--GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
+ ++ L N L SLN+S N+ + L LDL+ L
Sbjct: 359 HDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLE-LLDLAFTRLKVKDA 417
Query: 511 LEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL---SLSSLKS 566
NL L L++S + + +L++LNL N F G SL +L
Sbjct: 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGR 477
Query: 567 VKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
+++L LS +LS +L + ++++S N ++L+ N
Sbjct: 478 LEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASN 533
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 4e-57
Identities = 88/511 (17%), Positives = 167/511 (32%), Gaps = 24/511 (4%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
L+ I I + N L + L N+ + +L L NN+
Sbjct: 108 KHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167
Query: 138 KIPTNLSGCSNLIN-FLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
++S N L N + I + + L+ + + N +
Sbjct: 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAF-DSAVFQSLNFGGTQNLLVIFKGLKNST 226
Query: 197 V--LKVINVEENRLSGRIPNTLGQLRNS--FYLNIAGNQFSGNVPPSIYNLSSLELLYLR 252
+ L + E+ P L +N+ + F + + S L+ L L
Sbjct: 227 IQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLT 286
Query: 253 GNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPIN 312
+ LP + L L V++ N F S SN +L L + N ++
Sbjct: 287 ATH-LSELPSGLV-GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344
Query: 313 -FSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLS 371
L+NL L L+ +++ +L N S L +L L N + +
Sbjct: 345 CLENLENLRELDLSHDDIETSDCCNLQL----RNLSHLQSLNLSYNEPLSLKTEAFKECP 400
Query: 372 TTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
+ +++ ++ NL L + + L + L LQ L L N
Sbjct: 401 QLEL-LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGN 459
Query: 431 LLEGSIPF---SLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQ 487
SL L L L L L + + + + +++S N+LT +
Sbjct: 460 HFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS-SSIE 518
Query: 488 IFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLN 547
+ +YL+L++N ++ LP + L +++ +N + LE+
Sbjct: 519 ALSHLK-GIYLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI----YFLEWYK 573
Query: 548 LSYNSFRGGIPLSLSSLKSVKVLDLSSNNLS 578
+ + ++ + LS LS
Sbjct: 574 ENMQKLEDTEDTLCENPPLLRGVRLSDVTLS 604
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 9e-51
Identities = 73/382 (19%), Positives = 119/382 (31%), Gaps = 20/382 (5%)
Query: 249 LYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGK 308
L +P + + N +FS NL LDL
Sbjct: 17 YNCENLGL-NEIPGTL---PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWI 72
Query: 309 VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIA 368
F L L+L N L A L+ L L + +
Sbjct: 73 HEDTFQSQHRLDTLVLTANPLIFMAET------ALSGPKALKHLFFIQTGISSIDFIPLH 126
Query: 369 NLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLD 428
N T + +G N IS L N + ++ L L L+
Sbjct: 127 NQKTLES-LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185
Query: 429 FNLLE-GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNC--RSLLSLNVSQNKLTGALP 485
N + I + + L I L N +SL P
Sbjct: 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISP 245
Query: 486 KQIFNITTLSL-YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLE 544
+ +S+ ++L ++ + L ELD++ +S E+P+ L ++L+
Sbjct: 246 AVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLK 304
Query: 545 YLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKY-LENLSFLEYLNISSNHFEG 603
L LS N F +S S+ S+ L + N ++ LENL L L++S + E
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 604 KVPTKGVFSNKT---RISLSGN 622
N + ++LS N
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYN 386
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 1e-38
Identities = 74/397 (18%), Positives = 137/397 (34%), Gaps = 21/397 (5%)
Query: 73 RHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVG--RLSRLDTLML 130
+ L L I GI P + + + ++ I + + L
Sbjct: 177 QQATNLSLNLNGNDIAGI-EPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTF 235
Query: 131 ANNSFSGKIPTNLSGCSNL-INFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLP 189
+ P G + + + + I++N + + L++L + HL+ +LP
Sbjct: 236 EDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELP 294
Query: 190 ASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPP-SIYNLSSLEL 248
+ + LS LK + + N+ + + +L+I GN + + NL +L
Sbjct: 295 SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRE 354
Query: 249 LYLRGNRLIGSLPIDIGLT-LPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSG 307
L L + + S ++ L L L + ++ N +F L +LDL
Sbjct: 355 LDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414
Query: 308 KVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFITP--LTNCSKLIALGLYGNRFGGVLP 364
K + F L L L L+ + L D + L L L GN F
Sbjct: 415 KDAQSPFQNLHLLKVLNLSHSLL--------DISSEQLFDGLPALQHLNLQGNHFPKGNI 466
Query: 365 HSIANLSTTT--VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422
+L T + + +S +L +N + N+LT + + L +
Sbjct: 467 QKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGN 459
L L N + +P L L+ + L+ N L
Sbjct: 527 YL-NLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 1e-21
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 5/152 (3%)
Query: 472 SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG 531
+ N L +P + N T L+ S N L L NL LD++R Q+
Sbjct: 16 TYNCENLGLN-EIPGTLPNSTE---CLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 532 EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFL 591
T + L+ L L+ N +LS K++K L +S L N L
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTL 131
Query: 592 EYLNISSNHFEG-KVPTKGVFSNKTRISLSGN 622
E L + SNH K+P + N
Sbjct: 132 ESLYLGSNHISSIKLPKGFPTEKLKVLDFQNN 163
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 244 bits (626), Expect = 2e-73
Identities = 97/317 (30%), Positives = 143/317 (45%), Gaps = 42/317 (13%)
Query: 695 SYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEA 754
+L +AT F +IG G FG VY+G+L G VA+K + F E E
Sbjct: 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIET 88
Query: 755 LRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQR 814
L RH +L+ +I C + L+Y+YM+NG+L+ L+ S+ +S QR
Sbjct: 89 LSFCRHPHLVSLIGFCDE-RNE----MILIYKYMENGNLKRHLYGSD--LPTMSMSWEQR 141
Query: 815 LHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
L I I A + YLH IIH D+K N+LLD + V + DFG++K +
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198
Query: 875 TPSSSIGIKGTVGYVAPEYGMG---SEASMAGDVYSFGILLLEMFIRKRPTDSMFNDG-L 930
T +KGT+GY+ PEY + +E S DVYSFG++L E+ + +
Sbjct: 199 T-----VVKGTLGYIDPEYFIKGRLTEKS---DVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 931 TIHEFAMKALPQRVI-EIVDPLLLLEVRTNNSKNPCGDGRGGI-EECLVAVITIGVLCSM 988
+ E+A+++ + +IVDP L I E L V C
Sbjct: 251 NLAEWAVESHNNGQLEQIVDPNL----------------ADKIRPESLRKFGDTAVKCLA 294
Query: 989 ESPIDRTLEMRNVVAKL 1005
S DR M +V+ KL
Sbjct: 295 LSSEDRPS-MGDVLWKL 310
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 3e-73
Identities = 110/542 (20%), Positives = 197/542 (36%), Gaps = 35/542 (6%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
+ L + + S N S L+ +DL+ L L L+L N
Sbjct: 34 TKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTG-QLPASIGNL 195
P + SG ++L N +A L + IG + L+KL++A N + +LPA NL
Sbjct: 94 SFSPGSFSGLTSLENLVAVETKLASLESFPIG-QLITLKKLNVAHNFIHSCKLPAYFSNL 152
Query: 196 SVLKVINVEENRLSGRIPNTLGQLRNS----FYLNIAGNQFSGNVPPSIYNLSSLELLYL 251
+ L +++ N + N L LR + L+++ N + + L L L
Sbjct: 153 TNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTL 211
Query: 252 RGNRLIGSLPIDIGLTLPKLT------NFVIAENNFSGPIPNSFSNTSNLVM--LDLNLN 303
RGN ++ L L E N P+ ++ + L
Sbjct: 212 RGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271
Query: 304 LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVL 363
+ F L N+S + LAG ++ ++ + K +L + +
Sbjct: 272 NDFSDDIVKFHCLANVSAMSLAGVSI--------KYLEDVPKHFKWQSLSIIRCQLKQFP 323
Query: 364 PHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPH--EIGKLTN 421
+ L + + + N+ S I L +L+ + N L+ + +
Sbjct: 324 TLDLPFLKS----LTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377
Query: 422 LQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIP-SSLGNCRSLLSLNVSQNKL 480
L+ L L FN + + L L L+ Q + L+ S+ + LL L++S
Sbjct: 378 LRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436
Query: 481 TGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSA 539
+T+L+ L ++ N D+ V N NL LD+S+ Q+
Sbjct: 437 KIDFDGIFLGLTSLN-TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDT 495
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
L+ LN+S+N+ + L S+ LD S N + L + N+++N
Sbjct: 496 LHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNN 555
Query: 600 HF 601
Sbjct: 556 SV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 2e-53
Identities = 87/477 (18%), Positives = 157/477 (32%), Gaps = 46/477 (9%)
Query: 181 DNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
D L+ ++P I + K I++ N L + +L+++ + +
Sbjct: 20 DQKLS-KVPDDIPSS--TKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAW 76
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
+ L L L L GN + S L L N V E + L L++
Sbjct: 77 HGLHHLSNLILTGNPIQ-SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135
Query: 301 NLNLFSG-KVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRF 359
N K+P FS L NL + L+ N + NDL F+ ++L + N
Sbjct: 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQ--VNLSLDMSLNPI 193
Query: 360 GGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGN-------LVNLNGFGIDLNQLTGTI 412
+ + + + + N S I + G D L
Sbjct: 194 DFIQDQAFQGIKLHE--LTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFE 251
Query: 413 PHEIGKLTNLQLLYLDF--NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSL 470
P + L ++ + L ++ + L + +
Sbjct: 252 PSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLEDVPKHFKW 309
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSL------------------YLDLSNNFLN--DSLP 510
SL++ + +L + + +L+L YLDLS N L+
Sbjct: 310 QSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCS 369
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLS-LSSLKSVKV 569
+L LD+S N + A L++L+ +++ + S SL+ +
Sbjct: 370 YSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428
Query: 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGNG 623
LD+S N L+ L L ++ N F+ + VF+N T + LS
Sbjct: 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLS-NVFANTTNLTFLDLSKCQ 484
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 4e-39
Identities = 77/399 (19%), Positives = 133/399 (33%), Gaps = 35/399 (8%)
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
G++ P I + ++ +L +P DI N ++ N SFSN S
Sbjct: 2 GSLNPCIEVVPNITY-QCMDQKL-SKVPDDIP---SSTKNIDLSFNPLKILKSYSFSNFS 56
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
L LDL+ + L +LS L+L GN + + + + L L
Sbjct: 57 ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFS------GLTSLENLV 110
Query: 354 LYGNRFGGVLPHSIANLSTTTVQINMGRNQISG-TIPSGIGNLVNLNGFGIDLNQLTGTI 412
+ + I L T +N+ N I +P+ NL NL + N +
Sbjct: 111 AVETKLASLESFPIGQLITLKK-LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169
Query: 413 PHEIGKLTNLQL----LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPS-SLGNC 467
+++ L L + N ++ I L EL L+ N+ NI L N
Sbjct: 170 VNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNL 228
Query: 468 RSLLSLNVSQNKLTGALPKQIFNITTLS-------LYLDLSNNFLNDSLPLEVGNLQNLV 520
L + + +IF + + L+ ++ L N+
Sbjct: 229 AGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVS 288
Query: 521 ELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ 580
+ ++ + + + L++ + L L L K L L+ N S
Sbjct: 289 AMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQLKQFPTLDLPFL---KSLTLTMNKGS-- 341
Query: 581 IPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISL 619
I L L YL++S N +S+ SL
Sbjct: 342 ISFKKVALPSLSYLDLSRNALSFSGC--CSYSDLGTNSL 378
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 8e-26
Identities = 55/405 (13%), Positives = 112/405 (27%), Gaps = 68/405 (16%)
Query: 76 RVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSF 135
+ + L + L+ + + LA + +V + + +L +
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQL 319
Query: 136 SGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNL 195
+L L+ L++ N + + L
Sbjct: 320 KQFPTLDLP----------------------------FLKSLTLTMNKGS--ISFKKVAL 349
Query: 196 SVLKVINVEENRLSGRIPNTLGQLRNSF--YLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253
L +++ N LS + L + +L+++ N + + L L+ L +
Sbjct: 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQH 408
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
+ L L+L KL I+ N F ++L L + N F N
Sbjct: 409 STLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTT 373
N + L L L + + L
Sbjct: 469 -----------------------------FANTTNLTFLDLSKCQLEQISWGVFDTLHRL 499
Query: 374 TVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE 433
+ +NM N + S L +L+ N++ + +L L N +
Sbjct: 500 QL-LNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
Query: 434 GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCR--SLLSLNVS 476
I L + E + ++ ++ +L N S
Sbjct: 559 -CICEHQKFLQWVKEQKQFLVNVEQMTCATPVEMNTSLVLDFNNS 602
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-23
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 458 GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQ 517
G++ + ++ + KL+ +P I + T +DLS N L N
Sbjct: 2 GSLNPCIEVVPNI-TYQCMDQKLS-KVPDDIPSSTK---NIDLSFNPLKILKSYSFSNFS 56
Query: 518 NLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
L LD+SR ++ L L L+ N + P S S L S++ L L
Sbjct: 57 ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKL 116
Query: 578 SGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
+ + L L+ LN++ N FSN T + LS N
Sbjct: 117 ASLESFPIGQLITLKKLNVAHNFIHS-CKLPAYFSNLTNLVHVDLSYN 163
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 222 bits (568), Expect = 1e-65
Identities = 83/325 (25%), Positives = 127/325 (39%), Gaps = 53/325 (16%)
Query: 695 SYAELSKATGEFS------TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---- 744
S+ EL T F N +G+G FG VY+G + VAVK L
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEEL 73
Query: 745 FKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH 804
+ F E + + +H NL++++ S LVY YM NGSL + L +
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSD-GDD----LCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 805 DVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF 864
LS R IA A I +LH + IH D+K +N+LLD A + DFGLA+
Sbjct: 129 P---LSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 865 LYTCQVDDVETPSSSIGIKGTVGYVAPEYGMG--SEASMAGDVYSFGILLLEMFIRKRPT 922
+ + I GT Y+APE G + S D+YSFG++LLE+
Sbjct: 183 SEKFAQTVMTS-----RIVGTTAYMAPEALRGEITPKS---DIYSFGVVLLEIITGLPAV 234
Query: 923 DSMFNDGLTIHEFAMKAL--PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVI 980
D L + + + + + + +D + + A+
Sbjct: 235 DEHREPQLLL-DIKEEIEDEEKTIEDYIDKKM----------------NDADSTSVEAMY 277
Query: 981 TIGVLCSMESPIDRTLEMRNVVAKL 1005
++ C E R ++ V L
Sbjct: 278 SVASQCLHEKKNKRPD-IKKVQQLL 301
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 208 bits (530), Expect = 3e-60
Identities = 72/342 (21%), Positives = 135/342 (39%), Gaps = 47/342 (13%)
Query: 679 HKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN 738
H +S ++ + L + + +G FG V++ L VAVK+
Sbjct: 4 HHHHHSSGVD-----LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFP 56
Query: 739 LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH 798
+ K +++ E +L ++H N+++ I + L+ + + GSL ++L
Sbjct: 57 IQDKQSWQ-NEYEVYSLPGMKHENILQFIGAEKR-GTSVDVDLWLITAFHEKGSLSDFLK 114
Query: 799 HSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH-------CQPPIIHGDLKPSNVLLDHD 851
+ +S + HIA +A + YLH +P I H D+K NVLL ++
Sbjct: 115 ANV-------VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167
Query: 852 MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-----EASMAGDVY 906
+ A + DFGLA + ++ + G GT Y+APE G+ +A + D+Y
Sbjct: 168 LTACIADFGLALKF-----EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 222
Query: 907 SFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP--QRVIEIVDPLLL-LEVRTNNSKN 963
+ G++L E+ R D ++ + E + P + + E+V +R K+
Sbjct: 223 AMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKH 282
Query: 964 PCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005
+ + C R L V ++
Sbjct: 283 ----------AGMAMLCETIEECWDHDAEAR-LSAGCVGERI 313
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 195 bits (496), Expect = 1e-55
Identities = 74/329 (22%), Positives = 127/329 (38%), Gaps = 37/329 (11%)
Query: 695 SYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECE- 753
+ +E S +IG+G +G VY+G L VAVKV ++F+ E
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVF---SFANRQNFINEKNI 58
Query: 754 -ALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
+ + H N+ + I + + G LV EY NGSL ++L +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT-------SDWV 111
Query: 813 QRLHIAIDIAYAIEYLH------HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-FL 865
+A + + YLH H +P I H DL NVL+ +D + DFGL+
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGS-------EASMAGDVYSFGILLLEMFIR 918
V E +++I GT+ Y+APE G+ A D+Y+ G++ E+F+R
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
Query: 919 KRPTDSMFNDGLTIHE--FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
TD + + ++ F + E + L V + + +
Sbjct: 232 C--TDLFPGESVPEYQMAFQTEVGNHPTFEDMQVL----VSREKQRPKFPEAWKENSLAV 285
Query: 977 VAVITIGVLCSMESPIDRTLEMRNVVAKL 1005
++ C + R L + ++
Sbjct: 286 RSLKETIEDCWDQDAEAR-LTAQXAEERM 313
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 188 bits (480), Expect = 1e-53
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 25/237 (10%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
E ++G+G+FG V + VA+K + + K+F+ E L + H N++
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 64
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
K+ C + LV EY + GSL LH + + + + +
Sbjct: 65 KLYGACLNPVC-------LVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCLQCSQG 114
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ YLH +IH DLKP N+LL V + DFG A + T K
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT----------HMTNNK 164
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940
G+ ++APE GS S DV+S+GI+L E+ R++P D + I
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 221
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 3e-53
Identities = 101/542 (18%), Positives = 186/542 (34%), Gaps = 58/542 (10%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
L L + + S + L+++DL+ LS L TL+L N
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLT-GQLPASIGNL 195
SG S+L +A NL + + L++L++A N + +LP NL
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148
Query: 196 SVLKVINVEENRLSGRIPNTLGQLRNS----FYLNIAGNQFSGNVPPSIYNLSSLELLYL 251
+ L+ +++ N++ L L L+++ N + + P + L L L
Sbjct: 149 TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTL 207
Query: 252 RGNRLIGSLPIDIGLTLPKLT------NFVIAENNFSGPIPNSFSNTSNLVMLDLNLN-- 303
R N ++ L L E N ++ NL + + L
Sbjct: 208 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267
Query: 304 -LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGV 362
+ + F+ L N+S L + + + + L L +FG
Sbjct: 268 DYYLDDIIDLFNCLTNVSSFSLVSVTI--------ERVKDFSYNFGWQHLELVNCKFGQF 319
Query: 363 LPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422
+ +L + N+ S + L +L
Sbjct: 320 PTLKLKSLKR----LTFTSNKGG-NAFSEVD-------------------------LPSL 349
Query: 423 QLLYLDFNLLE--GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKL 480
+ L L N L G S T L L+L N + + S+ L L+ + L
Sbjct: 350 EFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNL 408
Query: 481 TGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA-TLSA 539
+F +YLD+S+ + L +L L ++ N +
Sbjct: 409 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
+L +L+LS P + +SL S++VL+++SN L + L+ L+ + + +N
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
Query: 600 HF 601
+
Sbjct: 529 PW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 7e-44
Identities = 94/478 (19%), Positives = 168/478 (35%), Gaps = 49/478 (10%)
Query: 181 DNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
+ + ++P ++ K +++ N L + L+++ + +
Sbjct: 16 ELNFY-KIPDNLPFS--TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY 72
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
+LS L L L GN + SL + L L V E N + + L L++
Sbjct: 73 QSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131
Query: 301 NLN-LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRF 359
N + S K+P FS L NL L L+ N + + DL + + ++L L N
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL--LNLSLDLSLNPM 189
Query: 360 GGVLPHSIANLSTTTVQINMGRNQISGTIPSG-IGNLVNLN------GFGIDLNQLTGTI 412
+ P + + + + N S + I L L G + L
Sbjct: 190 NFIQPGAFKEIRLHK--LTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247
Query: 413 PHEIGKLTNLQLLYLDFNLLEGS---IPFSLGNLTLLTELELQSNYLQGNIPSSL----- 464
+ L NL + L+ I LT ++ L S ++ S
Sbjct: 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQ 307
Query: 465 --------------GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN--DS 508
+SL L + NK A + ++ +L +LDLS N L+
Sbjct: 308 HLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV--DLPSLE-FLDLSRNGLSFKGC 364
Query: 509 LPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLS-LSSLKSV 567
+L LD+S N V + + LE+L+ +++ + S SL+++
Sbjct: 365 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423
Query: 568 KVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
LD+S + LS LE L ++ N F+ +F+ + LS
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL-PDIFTELRNLTFLDLSQC 480
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 8e-44
Identities = 100/514 (19%), Positives = 167/514 (32%), Gaps = 55/514 (10%)
Query: 125 LDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHL 184
L L+ N + L + I + L L + N +
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLILTGNPI 88
Query: 185 TGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF-SGNVPPSIYNL 243
+ LS L+ + E L+ +G L+ LN+A N S +P NL
Sbjct: 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148
Query: 244 SSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVI----AENNFSGPIPNSFSNTSNLVMLD 299
++LE L L N+ I S+ L ++ + + N + P +F L L
Sbjct: 149 TNLEHLDLSSNK-IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLT 206
Query: 300 LNLNLFSGKVPIN-FSRLQNLSWLLLAGN---NLGNGAANDLDFITPLTNCSKLIALGLY 355
L N S V L L L N GN D + L N + Y
Sbjct: 207 LRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIP-SGIGNLVNLNGFGIDLNQLTGTIPH 414
+ + + L+ + ++ I S +L Q
Sbjct: 267 LDYYLDDIIDLFNCLTNVS-SFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT---- 321
Query: 415 EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ--GNIPSSLGNCRSLLS 472
KL +L+ L N + +L L L+L N L G S SL
Sbjct: 322 --LKLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKY 377
Query: 473 LNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSG 531
L++S N + + + L +LD ++ L V +L+NL+ LDIS
Sbjct: 378 LDLSFNGVI-TMSSNFLGLEQLE-HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435
Query: 532 EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFL 591
+ +SLE L ++ NSF+ P L L
Sbjct: 436 AFNGIFNGLSSLEVLKMAGNSFQENFL-----------------------PDIFTELRNL 472
Query: 592 EYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
+L++S E ++ F++ + ++++ N
Sbjct: 473 TFLDLSQCQLE-QLS-PTAFNSLSSLQVLNMASN 504
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 6e-31
Identities = 75/447 (16%), Positives = 146/447 (32%), Gaps = 45/447 (10%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNF-YGNIPHEVGRLSRLDTLMLANNSFS 136
KL ++ + + +G+L L+ +++A N +P L+ L+ L L++N
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Query: 137 GKIPTNLSGCSNLINFLAH---GNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA-SI 192
T+L + N + I +RL KL++ +N + + I
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCI 221
Query: 193 GNLSVLKVINVE------ENRLSGRIPNTLGQLRNSF--YLNIAGNQFSGNVPPSIY-NL 243
L+ L+V + E L + L L N +A + + ++ L
Sbjct: 222 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCL 281
Query: 244 SSLELLYLRGNRL--IGSLPIDIGLT----------------LPKLTNFVIAENNFSGPI 285
+++ L + + + G L L N
Sbjct: 282 TNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA- 340
Query: 286 PNSFSNTSNLVMLDLNLNL--FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPL 343
S + +L LDL+ N F G + +L +L L+ N + + +
Sbjct: 341 -FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-------ITMSSNF 392
Query: 344 TNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGI 403
+L L + + S+ + +++ L +L +
Sbjct: 393 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452
Query: 404 DLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPS 462
N +I +L NL L L LE P + +L+ L L + SN L+
Sbjct: 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512
Query: 463 SLGNCRSLLSLNVSQNKLTGALPKQIF 489
SL + + N + P+ +
Sbjct: 513 IFDRLTSLQKIWLHTNPWDCSCPRIDY 539
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 2e-19
Identities = 60/329 (18%), Positives = 113/329 (34%), Gaps = 26/329 (7%)
Query: 17 FNLLLHSYAFAGVPSNETDRLALLAIKS--QLHDP----------LGVTSSWNNSINLCQ 64
+L + G+ E RL L ++ L L + ++
Sbjct: 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 271
Query: 65 WTGVTCGHRHQRVTKLYLRNQSIGGILS-PHVGNLSFLRLIDLADNNFYGNIPHEVGRLS 123
+ + V+ L + +I + + L L++ F +L
Sbjct: 272 DDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTL------KLK 325
Query: 124 RLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQ-IAANIGYNWMRLEKLSIADN 182
L L +N +L N L + + + L+ L ++ N
Sbjct: 326 SLKRLTFTSNKGGNAFS--EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383
Query: 183 HLTGQLPASIGNLSVLKVINVEENRLSGRIP-NTLGQLRNSFYLNIAGNQFSGNVPPSIY 241
+ + ++ L L+ ++ + + L + LRN YL+I+
Sbjct: 384 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 442
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
LSSLE+L + GN + DI L LT +++ P +F++ S+L +L++
Sbjct: 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502
Query: 302 LNLFSGKVPIN-FSRLQNLSWLLLAGNNL 329
N VP F RL +L + L N
Sbjct: 503 SNQLK-SVPDGIFDRLTSLQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 4e-17
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 8/155 (5%)
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
++ + +P + T LDLS N L + L LD+SR ++
Sbjct: 10 ITYQCMELNFY-KIPDNLPFSTK---NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 65
Query: 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSF 590
+ + L L L+ N + + S L S++ L NL+ + +L
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 591 LEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
L+ LN++ N + FSN T + LS N
Sbjct: 126 LKELNVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSN 159
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 2e-52
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRN 762
+ + IG GSFG V+R G VAVK+L F+ E ++ +RH N
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
++ + + + ++V EY+ GSL LH S + L +RL +A D+A
Sbjct: 96 IVLFMGAVTQPPNL-----SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVA 147
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ YLH+ PPI+H +LK N+L+D V DFGL++ T SS
Sbjct: 148 KGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA-------STFLSSKSA 199
Query: 883 KGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
GT ++APE ++ DVYSFG++L E+ ++P ++
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 3e-51
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 39/255 (15%)
Query: 685 SPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVL------- 737
+ +FP L+ E IG+G FG V++G L + +VA+K L
Sbjct: 2 AMGGSEFPKSRLPTLADN--EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG 59
Query: 738 NLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL 797
F+ F E + N+ H N++K+ + + +V E++ G L L
Sbjct: 60 ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDLYHRL 112
Query: 798 HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD-----HDM 852
+ +L + +DIA IEY+ + PPI+H DL+ N+ L +
Sbjct: 113 LDKAHP-----IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPV 166
Query: 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGI 910
A V DFGL++ ++ S G+ G ++APE + D YSF +
Sbjct: 167 CAKVADFGLSQ----------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 911 LLLEMFIRKRPTDSM 925
+L + + P D
Sbjct: 217 ILYTILTGEGPFDEY 231
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 185 bits (473), Expect = 6e-51
Identities = 101/426 (23%), Positives = 175/426 (41%), Gaps = 42/426 (9%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
K + ++T + +L + + + + + + L N +N + NQ +
Sbjct: 26 KMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK--SIDGVEYLNNLTQINFSNNQLT 81
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
+ NL+ L + + N++ P+ L LT + N + P N +
Sbjct: 82 D--ITPLKNLTKLVDILMNNNQIADITPLA---NLTNLTGLTLFNNQITDIDP--LKNLT 134
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
NL L+L+ N S S L +L L GN + + + PL N + L L
Sbjct: 135 NLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTD--------LKPLANLTTLERLD 183
Query: 354 LYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIP 413
+ N+ +A L+ + NQIS P +G L NL+ ++ NQL
Sbjct: 184 ISSNKVSD--ISVLAKLTNLE-SLIATNNQISDITP--LGILTNLDELSLNGNQLKD--I 236
Query: 414 HEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473
+ LTNL L L N + P L LT LTEL+L +N + S L +L +L
Sbjct: 237 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALTNL 292
Query: 474 NVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI 533
+++N+L I N+ L+ YL L N ++D P+ +L L L N+VS
Sbjct: 293 ELNENQLED--ISPISNLKNLT-YLTLYFNNISDISPV--SSLTKLQRLFFYNNKVSD-- 345
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY 593
++L+ T++ +L+ +N PL+ +L + L L+ + Y N+S
Sbjct: 346 VSSLANLTNINWLSAGHNQISDLTPLA--NLTRITQLGLNDQAWTNAPVNYKANVSIPNT 403
Query: 594 LNISSN 599
+ +
Sbjct: 404 VKNVTG 409
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 2e-50
Identities = 106/453 (23%), Positives = 186/453 (41%), Gaps = 43/453 (9%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
L +I + Q+ + L+ + + ++ + L L
Sbjct: 2 PLGSATITQDTPINQIF-TDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI 58
Query: 233 SGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+ L++L + N+L P+ L KL + ++ N + P +N
Sbjct: 59 KS--IDGVEYLNNLTQINFSNNQLTDITPLK---NLTKLVDILMNNNQIADITP--LANL 111
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
+NL L L N + L NL+ L L+ N + + I+ L+ + L L
Sbjct: 112 TNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD--------ISALSGLTSLQQL 161
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412
GN+ + P +ANL+T ++++ N++S S + L NL NQ++
Sbjct: 162 SF-GNQVTDLKP--LANLTTLE-RLDISSNKVSD--ISVLAKLTNLESLIATNNQISDIT 215
Query: 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLS 472
P +G LTNL L L+ N L+ I +L +LT LT+L+L +N + P L L
Sbjct: 216 P--LGILTNLDELSLNGNQLK-DIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 269
Query: 473 LNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGE 532
L + N+++ P + +T L+ L+L+ N L D P+ NL+NL L + N +S
Sbjct: 270 LKLGANQISNISP--LAGLTALT-NLELNENQLEDISPI--SNLKNLTYLTLYFNNISDI 324
Query: 533 IPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLE 592
P +S+ T L+ L N SL++L ++ L N +S P L NL+ +
Sbjct: 325 SP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRIT 378
Query: 593 YLNISSNHFEGKVPTKGVFSNKTRISLSGNGKL 625
L ++ + + + G L
Sbjct: 379 QLGLNDQAWTNAPVNYKANVSIPNTVKNVTGAL 411
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 5e-49
Identities = 115/530 (21%), Positives = 197/530 (37%), Gaps = 74/530 (13%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
+ ++ I I L+ L N + L ++ TL
Sbjct: 5 SATITQDTPINQI--FTDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI-- 58
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
++ G L N L +++ ++N LT P + NL+
Sbjct: 59 ---KSIDGVEYLNN----------------------LTQINFSNNQLTDITP--LKNLTK 91
Query: 198 LKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLI 257
L I + N+++ P L L N L + NQ + + NL++L L L N +
Sbjct: 92 LVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTIS 147
Query: 258 GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQ 317
+ L L N + P +N + L LD++ N S ++L
Sbjct: 148 DISALS---GLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLT 199
Query: 318 NLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQI 377
NL L+ N + + ITPL + L L L GN+ + ++A+L+ T +
Sbjct: 200 NLESLIATNNQISD--------ITPLGILTNLDELSLNGNQLKDI--GTLASLTNLT-DL 248
Query: 378 NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP 437
++ NQIS P + L L + NQ++ P + LT L L L+ N LE P
Sbjct: 249 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304
Query: 438 FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLY 497
+ NL LT L L N + P + + L L NK++ + N+T ++ +
Sbjct: 305 --ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNIN-W 357
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
L +N ++D PL NL + +L ++ + + ++ N N I
Sbjct: 358 LSAGHNQISDLTPL--ANLTRITQLGLNDQAWTNAPV---NYKANVSIPNTVKNVTGALI 412
Query: 558 -PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVP 606
P ++S S D++ N S + S + + F G V
Sbjct: 413 APATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVTIGKGTTTFSGTVT 461
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-44
Identities = 104/485 (21%), Positives = 181/485 (37%), Gaps = 46/485 (9%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
K L ++ +S +L + + V L+ L + +NN +
Sbjct: 26 KMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSNNQLT 81
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
P L + L++ L + N + N L L++ +N +T + NL+
Sbjct: 82 DITP--LKNLTKLVDILMNNNQIADITPLA---NLTNLTGLTLFNNQITD--IDPLKNLT 134
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRL 256
L + + N +S + L L + L+ GNQ + + NL++LE L + N++
Sbjct: 135 NLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTD--LKPLANLTTLERLDISSNKV 189
Query: 257 IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRL 316
+ L L + + N S P +NL L LN N + L
Sbjct: 190 SDISVLA---KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASL 242
Query: 317 QNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQ 376
NL+ L LA N + N + PL+ +KL L L N+ + P +A L+ T
Sbjct: 243 TNLTDLDLANNQISN--------LAPLSGLTKLTELKLGANQISNISP--LAGLTALTN- 291
Query: 377 INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSI 436
+ + NQ+ P I NL NL + N ++ P + LT LQ L+ N +
Sbjct: 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS 347
Query: 437 PFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL 496
L NLT + L N + P L N + L ++ T A N++ +
Sbjct: 348 S--LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNT 403
Query: 497 YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG 556
+++ + P + + + E DI+ N S + + +F G
Sbjct: 404 VKNVTGALI---APATISDGGSYTEPDITWNLPS-YTNEVSYTFSQPVTIGKGTTTFSGT 459
Query: 557 IPLSL 561
+ L
Sbjct: 460 VTQPL 464
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 1e-50
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 33/229 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHRN 762
+ + + + G +++G G + VKVL + + F EC LR H N
Sbjct: 11 QLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
++ ++ C S + L+ +M GSL LH + + Q + A+D+A
Sbjct: 69 VLPVLGACQSPPAPHP---TLITHWMPYGSLYNVLHEGTNF----VVDQSQAVKFALDMA 121
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ +LH +P I L +V++D DM A + + + G
Sbjct: 122 RGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP------------GR 168
Query: 883 KGTVGYVAPE------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
+VAPE ++ D++SF +LL E+ R+ P +
Sbjct: 169 MYAPAWVAPEALQKKPEDTNRRSA---DMWSFAVLLWELVTREVPFADL 214
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 4e-49
Identities = 103/554 (18%), Positives = 204/554 (36%), Gaps = 57/554 (10%)
Query: 102 RLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVG 161
R+ N +P L+ + L+L+ N ++ L
Sbjct: 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPL 62
Query: 162 QIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRI--PNTLGQL 219
I N L L + + + P + L L + + LS + L
Sbjct: 63 TIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNL 122
Query: 220 RNSFYLNIAGNQFSG-NVPPSIYNLSSLELLYLRGNRLIGSLPIDI-GLTLPKLTNFVIA 277
+ L+++ NQ + PS L+SL+ + N++ ++ L L+ F +A
Sbjct: 123 KALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182
Query: 278 ENNFSGPIPNSFSNTSN------LVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331
N+ + + N L +LD++ N ++ + NFS +S
Sbjct: 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFS--NAISKSQ-------- 232
Query: 332 GAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQ-INMGRNQISGTIPS 390
L ++ G + ++ A L+ ++V+ +++ + ++ S
Sbjct: 233 --------AFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF-SLNS 283
Query: 391 GI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTEL 449
+ L +L + N++ L NLQ+L L +NLL + L + +
Sbjct: 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343
Query: 450 ELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT--GALPK---------QIFNITTLSL-- 496
+LQ N++ + L +L++ N LT +P ++ + ++L
Sbjct: 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTA 403
Query: 497 -YLDLSNNFL-NDSLPLEVGNLQNLVELDISRNQVSG-EIPATLSACTSLEYLNLSYNSF 553
+ LS N L N + + + +L L +++N+ S T S SLE L L N
Sbjct: 404 NLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENML 463
Query: 554 RGGIPLSL-----SSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTK 608
+ L L ++VL L+ N L+ P +L+ L L+++SN +
Sbjct: 464 QLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHN 522
Query: 609 GVFSNKTRISLSGN 622
+ +N + +S N
Sbjct: 523 DLPANLEILDISRN 536
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 3e-46
Identities = 125/647 (19%), Positives = 218/647 (33%), Gaps = 65/647 (10%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLMLANNSF 135
+L L I + + L L+L++L I E L L L L ++
Sbjct: 26 TERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85
Query: 136 SGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWM-RLEKLSIADNHLTG-QLPASIG 193
P G +L + L + + + + L +L ++ N + L S G
Sbjct: 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG 145
Query: 194 NLSVLKVINVEENRLSGRIPNTLGQLRNS--FYLNIAGNQFSGNVPPSIYNLS------S 245
L+ LK I+ N++ + L L+ + ++A N V
Sbjct: 146 KLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMV 205
Query: 246 LELLYLRGNRL-----------IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSN--T 292
LE+L + GN I + + +N P N+F+
Sbjct: 206 LEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLAR 265
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
S++ LDL+ F L++L L LA N + N + L L
Sbjct: 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKI-----NKIADEA-FYGLDNLQVL 319
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412
L N G + + L I++ +N I+ L L + N LT
Sbjct: 320 NLSYNLLGELYSSNFYGLPKVAY-IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT--- 375
Query: 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTL-LTELELQSNYLQG-NIPSSLGNCRSL 470
I + ++ ++L N L +L + L + L N L+ +I L L
Sbjct: 376 --TIHFIPSIPDIFLSGNKLV-----TLPKINLTANLIHLSENRLENLDILYFLLRVPHL 428
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-----GNLQNLVELDIS 525
L ++QN+ + Q + L L N L + E+ L +L L ++
Sbjct: 429 QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLN 488
Query: 526 RNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYL 585
N ++ P S T+L L+L+ N L + ++++LD+S N L P
Sbjct: 489 HNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPA--NLEILDISRNQLLAPNPDVF 546
Query: 586 ENLSFLEYLNISSNHFEG-----------KVPTKGVFSNKTRISLSGNGKLCG-GLYELQ 633
+LS L+I+ N F + I G L+ L
Sbjct: 547 VSLS---VLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLS 603
Query: 634 LPSCGSKGSRKSTVALFKVVIPVTISCLILLGCFIVVYARRRRFVHK 680
C + KS +V VT++ ++ + + +K
Sbjct: 604 TEGCDEEEVLKSLKFSLFIVCTVTLTLFLMTILTVTKFRGFCFICYK 650
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 4e-16
Identities = 48/276 (17%), Positives = 90/276 (32%), Gaps = 27/276 (9%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
+ + L L I I L L++++L+ N L ++ + L N
Sbjct: 290 KDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNH 349
Query: 135 FSGKIPTNLSGCSNLINFLAHGNNLV--------------GQIAANIGYNWMRLEKLSIA 180
+ L N L G + + + ++
Sbjct: 350 IAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS 409
Query: 181 DNHLTG-QLPASIGNLSVLKVINVEENRLSGRIPN-TLGQLRNSFYLNIAGNQFSGNVPP 238
+N L + + + L+++ + +NR S + T + + L + N
Sbjct: 410 ENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWET 469
Query: 239 SI-----YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
+ LS L++LYL N + SLP + L L + N + N +
Sbjct: 470 ELCWDVFEGLSHLQVLYLNHNY-LNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--A 526
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
NL +LD++ N N +LS L + N
Sbjct: 527 NLEILDISRNQLLA---PNPDVFVSLSVLDITHNKF 559
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 6e-48
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 35/252 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL-GEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHR 761
+ + IG GSFG VY+G G+ VAVK+LN+T ++F E LR RH
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
N++ + ++ A+V ++ + SL LH S + + + + IA
Sbjct: 81 NILLFMGYSTA------PQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQT 129
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A ++YLH IIH DLK +N+ L D +GDFGLA
Sbjct: 130 ARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE-----Q 181
Query: 882 IKGTVGYVAPE------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEF 935
+ G++ ++APE S S DVY+FGI+L E+ + P ++ N I
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQS---DVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 936 AMKALPQRVIEI 947
+L + ++
Sbjct: 239 GRGSLSPDLSKV 250
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 8e-48
Identities = 59/228 (25%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT----RKGAFKSFVAECEALRNIRHRNLIK 765
+IG G FG VYR G VAVK ++ E + ++H N+I
Sbjct: 13 EIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ +C + LV E+ + G L L + ++ A+ IA +
Sbjct: 71 LRGVCLKEPNL-----CLVMEFARGGPLNRVLSGKR-------IPPDILVNWAVQIARGM 118
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLD--------HDMVAHVGDFGLAKFLYTCQVDDVETPS 877
YLH PIIH DLK SN+L+ + + + DFGLA+ +
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---------EWHRT 169
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
+ + G ++APE S S DV+S+G+LL E+ + P +
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 1e-47
Identities = 79/364 (21%), Positives = 142/364 (39%), Gaps = 34/364 (9%)
Query: 215 TLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNF 274
L + + + L S+ L + G + + S+ I L L
Sbjct: 17 PDADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEK-VASIQ-GIEY-LTNLEYL 71
Query: 275 VIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAA 334
+ N + P SN L L + N + L NL L L +N+ +
Sbjct: 72 NLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISD--- 124
Query: 335 NDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGN 394
I+PL N +K+ +L L N ++N++ + + +++ P I N
Sbjct: 125 -----ISPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLN-YLTVTESKVKDVTP--IAN 175
Query: 395 LVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSN 454
L +L ++ NQ+ P + LT+L N + P + N+T L L++ +N
Sbjct: 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231
Query: 455 YLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG 514
+ S L N L L + N+++ + ++T L L++ +N ++D L
Sbjct: 232 KITD--LSPLANLSQLTWLEIGTNQISD--INAVKDLTKLK-MLNVGSNQISDISVL--N 284
Query: 515 NLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSS 574
NL L L ++ NQ+ E + T+L L LS N P L+SL + D ++
Sbjct: 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFAN 342
Query: 575 NNLS 578
+
Sbjct: 343 QVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 3e-44
Identities = 87/380 (22%), Positives = 150/380 (39%), Gaps = 38/380 (10%)
Query: 243 LSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNL 302
++L L I + D L + V+ + + + + ++ L +
Sbjct: 2 AATLATLPAP----INQIFPDADLA--EGIRAVLQKASVTDVVT--QEELESITKLVVAG 53
Query: 303 NLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGV 362
+ L NL +L L GN + + I+PL+N KL L + N+
Sbjct: 54 EKVAS--IQGIEYLTNLEYLNLNGNQITD--------ISPLSNLVKLTNLYIGTNKI--T 101
Query: 363 LPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422
++ NL+ ++ + + IS P + NL + + N + + +T L
Sbjct: 102 DISALQNLTNLR-ELYLNEDNISDISP--LANLTKMYSLNLGANHNL-SDLSPLSNMTGL 157
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG 482
L + + ++ P NLT L L L N ++ P L + SL N++T
Sbjct: 158 NYLTVTESKVKDVTPI--ANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213
Query: 483 ALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTS 542
P + N+T L+ L + NN + D PL NL L L+I NQ+S I A + T
Sbjct: 214 ITP--VANMTRLN-SLKIGNNKITDLSPL--ANLSQLTWLEIGTNQISD-INA-VKDLTK 266
Query: 543 LEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
L+ LN+ N I L++L + L L++N L + + + L+ L L +S NH
Sbjct: 267 LKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324
Query: 603 GKVPTKGVFSNKTRISLSGN 622
P S +
Sbjct: 325 DIRPLAS-LSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-31
Identities = 76/381 (19%), Positives = 139/381 (36%), Gaps = 80/381 (20%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
+TKL + + + I + L+ L ++L N P + L +L L + N +
Sbjct: 46 ITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT 101
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
+ L +NL + +N+ + + N ++ L++ NH + + N++
Sbjct: 102 --DISALQNLTNLRELYLNEDNISD--ISPLA-NLTKMYSLNLGANHNLS-DLSPLSNMT 155
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRL 256
L + V E+++ I NL+ L L L N++
Sbjct: 156 GLNYLTVTESKVKD--------------------------VTPIANLTDLYSLSLNYNQI 189
Query: 257 IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRL 316
P+ +L L F N + P +N + L L + N + + L
Sbjct: 190 EDISPLA---SLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD--LSPLANL 242
Query: 317 QNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQ 376
L+WL + N + + I + + +KL L
Sbjct: 243 SQLTWLEIGTNQISD--------INAVKDLTKLKML------------------------ 270
Query: 377 INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSI 436
N+G NQIS S + NL LN ++ NQL IG LTNL L+L N +
Sbjct: 271 -NVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327
Query: 437 PFSLGNLTLLTELELQSNYLQ 457
P + +L+ + + + ++
Sbjct: 328 PLA--SLSKMDSADFANQVIK 346
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 3e-47
Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 29/229 (12%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECE--ALRNIRHRNLIKII 767
+G+G +G V+RG G VAVK+ KS+ E E +RH N++ I
Sbjct: 14 ECVGKGRYGEVWRGSWQ--GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ L+ Y + GSL ++L + L + L I + IA + +
Sbjct: 69 ASDMTSRHSSTQL-WLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAH 120
Query: 828 LH-----HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
LH +P I H DLK N+L+ + + D GLA + +
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-- 178
Query: 883 KGTVGYVAPE------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
GT Y+APE ++ D+++FG++L E+ R +
Sbjct: 179 -GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-46
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 32/228 (14%)
Query: 710 NMIGQGSFGFVYRGIL-GEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKI 766
+IG+G FG VY G GE VA++++++ R + K+F E A R RH N++
Sbjct: 39 ELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ C S A++ + +L + + L + + IA +I +
Sbjct: 95 MGACMSPPHL-----AIITSLCKGRTLYSVVRDAKIV-----LDVNKTRQIAQEIVKGMG 144
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YLH I+H DLK NV D+ V + DFGL Q E G +
Sbjct: 145 YLH---AKGILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLR--IQNGWL 198
Query: 887 GYVAPEYGMGSEASMAG---------DVYSFGILLLEMFIRKRPTDSM 925
++APE DV++ G + E+ R+ P +
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-46
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+G FG + E G ++ +K L + ++F+ E + +R + H N++K I +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ EY++ G+L + + Q QR+ A DIA + YLH
Sbjct: 78 KDKRL-----NFITEYIKGGTLRGIIKSMDSQ-----YPWSQRVSFAKDIASGMAYLHSM 127
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK-------G 884
IIH DL N L+ + V DFGLA+ + + S + G
Sbjct: 128 ---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
++APE G DV+SFGI+L E+ R
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 4e-46
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECE--ALRNIRHRNLIKII 767
IG+G FG V+RG G VAVK+ + + +S+ E E +RH N++ I
Sbjct: 48 ESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFI 102
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + LV +Y ++GSL ++L+ +++ + +A+ A + +
Sbjct: 103 AADNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAH 154
Query: 828 LH-----HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
LH +P I H DLK N+L+ + + D GLA + P+ +
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV-- 212
Query: 883 KGTVGYVAPEYGMGS------EASMAGDVYSFGILLLEMFIRKRPTDSM 925
GT Y+APE S E+ D+Y+ G++ E+ R
Sbjct: 213 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 6e-46
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 29/227 (12%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECE--ALRNIRHRNLIKII 767
IG+G +G V+ G G VAVKV S+ E E +RH N++ I
Sbjct: 43 KQIGKGRYGEVWMGKWR--GEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFI 97
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
L+ +Y +NGSL ++L + L L +A + +
Sbjct: 98 AADIKGTGSWTQL-YLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCH 149
Query: 828 LH-----HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
LH +P I H DLK N+L+ + + D GLA + + P++ +
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-- 207
Query: 883 KGTVGYVAPE------YGMGSEASMAGDVYSFGILLLEMFIRKRPTD 923
GT Y+ PE ++ + D+YSFG++L E+ R
Sbjct: 208 -GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 2e-44
Identities = 62/376 (16%), Positives = 113/376 (30%), Gaps = 76/376 (20%)
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
G+ ++ S E LY +G+ + + S
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPY-------------------------HDVLSQWQ 36
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
D N + + N G L
Sbjct: 37 RHYNADRNRWHSAWRQA----NSNNPQIETRTGRALKA---------------------- 70
Query: 354 LYGNRFGGVLPHSIANLSTTTVQI-NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412
+ + + + + P L +L ID L +
Sbjct: 71 ---------TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-EL 119
Query: 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNC----- 467
P + + L+ L L N L ++P S+ +L L EL +++ +P L +
Sbjct: 120 PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178
Query: 468 ----RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELD 523
+L SL + + +LP I N+ L L + N+ L+ +L + +L L ELD
Sbjct: 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLK-SLKIRNSPLS-ALGPAIHHLPKLEELD 235
Query: 524 ISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
+ P L+ L L S +PL + L ++ LDL ++P
Sbjct: 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295
Query: 584 YLENLSFLEYLNISSN 599
+ L + + +
Sbjct: 296 LIAQLPANCIILVPPH 311
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 2e-41
Identities = 55/314 (17%), Positives = 95/314 (30%), Gaps = 33/314 (10%)
Query: 288 SFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCS 347
++S L + S+ Q N N +
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADR----------NRWHSAWRQANSN 56
Query: 348 KLIALGLYGNRFGGVLPHSIANLSTTTVQI-NMGRNQISGTIPSGIGNLVNLNGFGIDLN 406
G + + + + + P L +L ID
Sbjct: 57 NPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAA 114
Query: 407 QLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGN 466
L +P + + L+ L L N L ++P S+ +L L EL +++ +P L +
Sbjct: 115 GLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172
Query: 467 CRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISR 526
+ N L L L + SLP + NLQNL L I
Sbjct: 173 TDASGEHQGLVN-LQ---------------SLRLEWTGIR-SLPASIANLQNLKSLKIRN 215
Query: 527 NQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLE 586
+ +S + + LE L+L + P +K L L + +P +
Sbjct: 216 SPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH 274
Query: 587 NLSFLEYLNISSNH 600
L+ LE L++
Sbjct: 275 RLTQLEKLDLRGCV 288
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 4e-40
Identities = 58/344 (16%), Positives = 113/344 (32%), Gaps = 40/344 (11%)
Query: 191 SIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250
+ S + + + + + L Q + + + + N ++ ++
Sbjct: 7 HHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNNPQIET 62
Query: 251 LRGNRLIGSLPIDIG-LTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKV 309
G L + + T P + P+ S+L + ++ ++
Sbjct: 63 RTGRALK-ATADLLEDATQPGRVALELRSVPLPQ-FPDQAFRLSHLQHMTIDAAGLM-EL 119
Query: 310 PINFSRLQNLSWLLLAGNNLGNGAANDLDFITP--LTNCSKLIALGLYGNRFGGVLPHSI 367
P + L L LA N L L P + + ++L L + LP +
Sbjct: 120 PDTMQQFAGLETLTLARNPL-----RAL----PASIASLNRLRELSIRACPELTELPEPL 170
Query: 368 ANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYL 427
A+ LVNL ++ + ++P I L NL+ L +
Sbjct: 171 ASTD----------------ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKI 213
Query: 428 DFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVS-QNKLTGALPK 486
+ L ++ ++ +L L EL+L+ N P G L L + + L LP
Sbjct: 214 RNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPL 271
Query: 487 QIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
I +T L LDL LP + L + + + +
Sbjct: 272 DIHRLTQLE-KLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-28
Identities = 47/240 (19%), Positives = 92/240 (38%), Gaps = 16/240 (6%)
Query: 101 LRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLV 160
++L P + RLS L + + ++P + + L N L
Sbjct: 83 RVALELRSVPL-PQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR 140
Query: 161 GQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV---------LKVINVEENRLSGR 211
+ A+I + RL +LSI +LP + + L+ + +E +
Sbjct: 141 -ALPASIA-SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-S 197
Query: 212 IPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKL 271
+P ++ L+N L I + S + P+I++L LE L LRG + + P G L
Sbjct: 198 LPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG-GRAPL 255
Query: 272 TNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331
++ + + +P + L LDL + ++P ++L +L+ +
Sbjct: 256 KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 7e-21
Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 32/198 (16%)
Query: 434 GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG----------- 482
GS + + L Q + L + + + ++
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE 61
Query: 483 --------ALPKQIFNITTLSL-YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI 533
A + + T L+L + L P + L +L + I + E+
Sbjct: 62 TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-EL 119
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSF--- 590
P T+ LE L L+ N R +P S++SL ++ L + + ++P+ L +
Sbjct: 120 PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178
Query: 591 ------LEYLNISSNHFE 602
L+ L +
Sbjct: 179 HQGLVNLQSLRLEWTGIR 196
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 2e-17
Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 14/203 (6%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGR---------LSRLDTL 128
L L + L + +L+ LR + + +P + L L +L
Sbjct: 130 ETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSL 188
Query: 129 MLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQL 188
L +P +++ NL + + L + I + +LE+L +
Sbjct: 189 RLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH-HLPKLEELDLRGCTALRNY 245
Query: 189 PASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLEL 248
P G + LK + +++ +P + +L L++ G +P I L + +
Sbjct: 246 PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCI 305
Query: 249 LYLRGNRLIGSLPIDIGLTLPKL 271
+ + + L L + P
Sbjct: 306 ILVPPH-LQAQLDQHRPVARPAE 327
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 7e-44
Identities = 87/515 (16%), Positives = 186/515 (36%), Gaps = 34/515 (6%)
Query: 105 DLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIA 164
D +F +IP + + + +L L+ N + +L C+NL + + + I
Sbjct: 11 DGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRI-NTIE 66
Query: 165 ANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG-RIPNTLGQLRNSF 223
+ Y+ LE L ++DNHL+ + G LS LK +N+ N + + L N
Sbjct: 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126
Query: 224 YLNIAGNQFSGNVPP-SIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFS 282
L I + + L+SL L ++ + + ++ + + + + +
Sbjct: 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALS-LRNYQSQSLKSIRDIHHLTLHLSESA 185
Query: 283 GPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITP 342
+ S++ L+L + + S + + +
Sbjct: 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245
Query: 343 LTNC-SKLIALGLYGNRFGGVL---------PHSIANLSTTTVQIN-MGRNQISGTIPSG 391
L +L + G+ + + T T++ + + + + +
Sbjct: 246 LLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305
Query: 392 IGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFS---LGNLTLLTE 448
L + ++ +++ L +L+ L L NL+ + G L
Sbjct: 306 YSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQT 365
Query: 449 LELQSNYLQ--GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
L L N+L+ L ++L SL++S+N +P + +L+LS+ +
Sbjct: 366 LVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM-RFLNLSSTGIR 423
Query: 507 DSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKS 566
++ Q L LD+S N + L L+ L +S N + +P S
Sbjct: 424 V---VKTCIPQTLEVLDVSNNNLD-SFSLFL---PRLQELYISRNKLKT-LP-DASLFPV 474
Query: 567 VKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHF 601
+ V+ +S N L + L+ L+ + + +N +
Sbjct: 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 8e-44
Identities = 100/513 (19%), Positives = 184/513 (35%), Gaps = 37/513 (7%)
Query: 130 LANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLP 189
+ SF+ IP+ L+ + + + N + I L+ L + + +
Sbjct: 12 GRSRSFT-SIPSGLT--AAMKSLDLSFNKIT-YIGHGDLRACANLQVLILKSSRINTIEG 67
Query: 190 ASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSG-NVPPSIYNLSSLEL 248
+ +L L+ +++ +N LS + G L + YLN+ GN + V NL++L+
Sbjct: 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127
Query: 249 LYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGK 308
L + + L L I + S + ++ L L+L+ +
Sbjct: 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFL 187
Query: 309 VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIA--LGLYGNRFGGVLPHS 366
+ I L ++ +L L NL + L + KL L F +L
Sbjct: 188 LEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLL 247
Query: 367 IANLSTTTVQI-NMGRNQISGTIPSGIG--------NLVNLNGFGIDLNQLTGTIPHEIG 417
L + V+ + N + PS V + I L +
Sbjct: 248 RYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYS 307
Query: 418 KLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNI---PSSLGNCRSLLSLN 474
L ++ + ++ + + +L L L+L N + + G SL +L
Sbjct: 308 LLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367
Query: 475 VSQNKLTGALPKQIFNITTLS--LYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGE 532
+SQN L ++ K + TL LD+S N + +P + + L++S +
Sbjct: 368 LSQNHLR-SMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-V 424
Query: 533 IPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLE 592
+ + +LE L++S N+ L L L+ L +S N L +P L
Sbjct: 425 VKTCIP--QTLEVLDVSNNNLDS-FSLFLPRLQ---ELYISRNKLK-TLPDAS-LFPVLL 476
Query: 593 YLNISSNHFEGKVPTKGVFSNKTRIS---LSGN 622
+ IS N K G+F T + L N
Sbjct: 477 VMKISRNQL--KSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 6e-43
Identities = 97/511 (18%), Positives = 173/511 (33%), Gaps = 39/511 (7%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLMLANNSF 135
+ L L I I + + L+++ L + I + L L+ L L++N
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRI-NTIEGDAFYSLGSLEHLDLSDNHL 86
Query: 136 SGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA-SIGN 194
S + S+L GN ++ N L+ L I + ++
Sbjct: 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG 146
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGN 254
L+ L + ++ L +L +R+ +L + ++ + + LSS+ L LR
Sbjct: 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206
Query: 255 RLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFS 314
L + S SF+ L+ L L+
Sbjct: 207 NL-ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELS----------- 254
Query: 315 RLQNLSWLLLAGNNLGNGAANDLDFITPLTN--CSKLIALGLYGNRFGGVLPHSIANLST 372
+ + N LG+ ++ D ++ L + L + L + L
Sbjct: 255 ---EVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
Query: 373 TTVQINMGRNQISGTIPSGIG-NLVNLNGFGIDLNQLTGTIPHE---IGKLTNLQLLYLD 428
I + +++ +P +L +L + N + G +LQ L L
Sbjct: 312 VKR-ITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 369
Query: 429 FNLLE--GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPK 486
N L L L LT L++ N +P S + LN+S + +
Sbjct: 370 QNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKT 427
Query: 487 QIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYL 546
I LD+SNN L+ S L L L EL ISRN++ +P S L +
Sbjct: 428 CIPQTLE---VLDVSNNNLD-SFSL---FLPRLQELYISRNKLK-TLPDA-SLFPVLLVM 478
Query: 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
+S N + L S++ + L +N
Sbjct: 479 KISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 1e-19
Identities = 52/384 (13%), Positives = 116/384 (30%), Gaps = 52/384 (13%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
+ + L L +L LS +R ++L D N + +
Sbjct: 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFR 231
Query: 135 FSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGN 194
S + + L+ ++ + + + +
Sbjct: 232 GSVLTDESFNELLKLLRYILELSEVEFD-------DCTLNGLGDFNPSESDVVSELGKVE 284
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGN 254
++ +++ + L + L + + ++ +L SLE L L N
Sbjct: 285 TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSEN 344
Query: 255 RLIGSLPIDIGL--TLPKLTNFVIAENNFS--GPIPNSFSNTSNLVMLDLNLNLFSGKVP 310
++ + P L V+++N+ NL LD++ N F +P
Sbjct: 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMP 403
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
+ + + +L L+ + + C +P ++ L
Sbjct: 404 DSCQWPEKMRFLNLSSTGI-----------RVVKTC----------------IPQTLEVL 436
Query: 371 STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
++ N + + + L L I N+L T+P + L ++ + N
Sbjct: 437 -------DVSNNNLD-SFSLFLPRLQELY---ISRNKLK-TLP-DASLFPVLLVMKISRN 483
Query: 431 LLEGSIPFSLGNLTLLTELELQSN 454
L+ LT L ++ L +N
Sbjct: 484 QLKSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 1e-11
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 7/131 (5%)
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
D + S+P + + LD+S N+++ L AC +L+ L L +
Sbjct: 10 CDGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66
Query: 558 PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR- 616
+ SL S++ LDLS N+LS + LS L+YLN+ N ++ + +F N T
Sbjct: 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNL 125
Query: 617 --ISLSGNGKL 625
+ +
Sbjct: 126 QTLRIGNVETF 136
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-07
Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 22/190 (11%)
Query: 76 RVTKLYLRN---QSIGGILSPHVGNLSFLRLIDLADNNFY--GNIPHEVGRLSRLDTLML 130
+ L L S G L+ + L+ N+ + L L +L +
Sbjct: 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI 394
Query: 131 ANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA 190
+ N+F +P + + + + I LE L +++N+L
Sbjct: 395 SRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQT---LEVLDVSNNNLD-SFSL 448
Query: 191 SIGNLSVLKVINVEENRLSGRIPNT--LGQLRNSFYLNIAGNQFSGNVPPSIY-NLSSLE 247
+ L L + N+L +P+ L + I+ NQ +VP I+ L+SL+
Sbjct: 449 FLPRLQEL---YISRNKLK-TLPDASLFPVLL---VMKISRNQLK-SVPDGIFDRLTSLQ 500
Query: 248 LLYLRGNRLI 257
++L N
Sbjct: 501 KIWLHTNPWD 510
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 5e-43
Identities = 99/510 (19%), Positives = 167/510 (32%), Gaps = 84/510 (16%)
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
+ N+ A + + N P G + L + L+
Sbjct: 26 MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELN------ 79
Query: 151 NFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG 210
N + + LE L + N LT +LP +L L V N LS
Sbjct: 80 ------NLGLSSLPELPP----HLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKALSD 128
Query: 211 RIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPK 270
P L YL ++ NQ P + N S L+++ + N L LP P
Sbjct: 129 LPPL----LE---YLGVSNNQLEKL--PELQNSSFLKIIDVDNNSLK-KLPD----LPPS 174
Query: 271 LTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG 330
L N +P N L + + N K+P L+++ G
Sbjct: 175 LEFIAAGNNQLEE-LPE-LQNLPFLTAIYADNNSLK-KLPDLPLSLESI--------VAG 223
Query: 331 NGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPS 390
N N L+ + L N L + N LP +L +N+ N ++ +P
Sbjct: 224 N---NILEELPELQNLPFLTTIYADNNLL-KTLPDLPPSLEA----LNVRDNYLT-DLPE 274
Query: 391 GIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELE 450
+L L+ + L+ P NL L N + S+ + L EL
Sbjct: 275 LPQSLTFLDVSENIFSGLSELPP-------NLYYLNASSNEIR-SLCDLPPS---LEELN 323
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
+ +N L +P+ L L S N L +P+ N+ L + N L P
Sbjct: 324 VSNNKLI-ELPALPPR---LERLIASFNHLA-EVPELPQNLK----QLHVEYNPLR-EFP 373
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVL 570
++++L +++ + +L+ L++ N R P S++ L
Sbjct: 374 DIPESVEDL--------RMNSHLAEVPELPQNLKQLHVETNPLR-EFPDIPESVED---L 421
Query: 571 DLSSNNLSGQIPKYLENLSFLEYLNISSNH 600
++S + E LE +H
Sbjct: 422 RMNSERVVDPYEFAHETTDKLEDDVFEHHH 451
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 3e-42
Identities = 95/487 (19%), Positives = 167/487 (34%), Gaps = 82/487 (16%)
Query: 116 PHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLE 175
P V + L + +++ + ++P + + + G +
Sbjct: 5 PRNVS-NTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNG-EQREMA 61
Query: 176 KLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGN 235
+ D + + LS +P L + L + N +
Sbjct: 62 VSRLRDCLDRQ-----------AHELELNNLGLS-SLPELPPHLES---LVASCNSLT-E 105
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
+P +L SL + L LP P L ++ N +P N+S L
Sbjct: 106 LPELPQSLKSLLVDNNNLKAL-SDLP-------PLLEYLGVSNNQLEK-LP-ELQNSSFL 155
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
++D++ N K+P L+ + GN N L+ + L N L A+
Sbjct: 156 KIIDVDNNSLK-KLPDLPPSLEFI--------AAGN---NQLEELPELQNLPFLTAIYAD 203
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHE 415
N LP +L + I G N + + NL L D N L T+P
Sbjct: 204 NNSLK-KLPDLPLSLES----IVAGNNIL--EELPELQNLPFLTTIYADNNLLK-TLPDL 255
Query: 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV 475
L L + +P +LT L E + + N L LN
Sbjct: 256 PPSLEALNVRDNYLT----DLPELPQSLTFLDVSENIFS----GLSELPPN---LYYLNA 304
Query: 476 SQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA 535
S N++ +L ++ L ++SNN L LP L+ L S N ++ E+P
Sbjct: 305 SSNEIR-SLCDLPPSLEEL----NVSNNKLI-ELPALPPRLE---RLIASFNHLA-EVPE 354
Query: 536 TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLN 595
+L+ L++ YN R P S++ L N+ ++P+ +NL + L+
Sbjct: 355 LP---QNLKQLHVEYNPLRE-FPDIPESVED-----LRMNSHLAEVPELPQNL---KQLH 402
Query: 596 ISSNHFE 602
+ +N
Sbjct: 403 VETNPLR 409
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 5e-42
Identities = 93/509 (18%), Positives = 163/509 (32%), Gaps = 79/509 (15%)
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
++P + +FL+ +N +P E + A + + P +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 151 NFLAHGNNLVGQIAANIGYNWM--------RLEKLSIADNHLTGQLPASIGNLSVLKVIN 202
+ + LE L + N LT +LP +L L V N
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLT-ELPELPQSLKSLLVDN 120
Query: 203 VEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPI 262
LS P L YL ++ NQ P + N S L+++ + N L LP
Sbjct: 121 NNLKALSDLPPL----LE---YLGVSNNQLEKL--PELQNSSFLKIIDVDNNSLK-KLPD 170
Query: 263 DIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWL 322
P L N +P N L + + N K+P L+++
Sbjct: 171 ----LPPSLEFIAAGNNQLEE-LPE-LQNLPFLTAIYADNNSLK-KLPDLPLSLESI--- 220
Query: 323 LLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRN 382
GN N L+ + L N L + N LP +L +N+ N
Sbjct: 221 -----VAGN---NILEELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEA----LNVRDN 267
Query: 383 QISGTIPSGIGNLVNLNGFGIDLNQLTGTIPH-------------EIGKLTNLQLLYLDF 429
++ +P +L L+ + L+ P+ +L+ L +
Sbjct: 268 YLT-DLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSN 326
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
N L +P L L N+L +P N + L +V N L P
Sbjct: 327 NKLI-ELPALPPRLE---RLIASFNHLA-EVPELPQNLKQL---HVEYNPLR-EFPDIPE 377
Query: 490 NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLS 549
++ L + N+ L +P NL+ +L + N + E P S+E L ++
Sbjct: 378 SVEDLRM-----NSHLA-EVPELPQNLK---QLHVETNPLR-EFPDIPE---SVEDLRMN 424
Query: 550 YNSFRGGIPLSLSSLKSVKVLDLSSNNLS 578
+ + ++ ++
Sbjct: 425 SERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 2e-37
Identities = 89/484 (18%), Positives = 151/484 (31%), Gaps = 92/484 (19%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLAD------------NNFYGNIPHEVGRL 122
+ T+ Y P G + + L D N ++P L
Sbjct: 34 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHL 93
Query: 123 SRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADN 182
L + NS + ++P +L+ + L LE L +++N
Sbjct: 94 ESLV---ASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPL--------LEYLGVSNN 141
Query: 183 HLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYN 242
L +LP + N S LK+I+V+ N L ++P+ L ++ NQ P + N
Sbjct: 142 QLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPDLPPSLE---FIAAGNNQLE--ELPELQN 193
Query: 243 LSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNL 302
L L +Y N L LP L + V N N L + +
Sbjct: 194 LPFLTAIYADNNSLK-KLPDLPL----SLESIVAGNNILE--ELPELQNLPFLTTIYADN 246
Query: 303 NLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGV 362
NL +P +L L + N L + + + L +
Sbjct: 247 NLLK-TLP---DLPPSLEALNVRDNYLTD-------LPELPQSLTFLDVSENIFSG---- 291
Query: 363 LPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422
L NL +N N+I ++ +L LN + N+L +P L
Sbjct: 292 LSELPPNLYY----LNASSNEIR-SLCDLPPSLEELN---VSNNKLI-ELPALPP---RL 339
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLL----------- 471
+ L FN L +P NL +L ++ N L+ P + L
Sbjct: 340 ERLIASFNHLA-EVPELPQNLK---QLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPEL 394
Query: 472 -----SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISR 526
L+V N L P ++ L +++ + D L +
Sbjct: 395 PQNLKQLHVETNPLR-EFPDIPESVE----DLRMNSERVVDPYEFAHETTDKLEDDVFEH 449
Query: 527 NQVS 530
+
Sbjct: 450 HHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-33
Identities = 70/382 (18%), Positives = 124/382 (32%), Gaps = 89/382 (23%)
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
+ P + + L+ + L +P++ + T + A + + P +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAE-NVKSKTEYYNAWSEWERNAPPGNGEQREM 60
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
+ L L + L L L +
Sbjct: 61 AVSRLRDCL-----------DRQAHELELNNLGLSS------------------------ 85
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPH- 414
LP +L + + N ++ +P +L +L +L L+ P
Sbjct: 86 -------LPELPPHLES----LVASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLL 133
Query: 415 --------------EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNI 460
E+ + L+++ +D N L+ +P + L + +N L+ +
Sbjct: 134 EYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPPS---LEFIAAGNNQLE-EL 188
Query: 461 PSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLV 520
P L N L ++ N L LP ++ + + NN L E+ NL L
Sbjct: 189 P-ELQNLPFLTAIYADNNSLK-KLPDLPLSLES----IVAGNNIL--EELPELQNLPFLT 240
Query: 521 ELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ 580
+ N + +P SLE LN+ N +P SL LD+S N S
Sbjct: 241 TIYADNNLLK-TLPDLPP---SLEALNVRDNYLT-DLPELPQSLTF---LDVSENIFS-G 291
Query: 581 IPKYLENLSFLEYLNISSNHFE 602
+ + N L YLN SSN
Sbjct: 292 LSELPPN---LYYLNASSNEIR 310
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 3e-26
Identities = 57/269 (21%), Positives = 100/269 (37%), Gaps = 41/269 (15%)
Query: 368 ANLSTTTVQ-INMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKL------- 419
N+S T +Q + ++ +P N+ + + ++ P G+
Sbjct: 6 RNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSR 64
Query: 420 ------TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473
L L+ L S+P + L L N L +P + +SLL
Sbjct: 65 LRDCLDRQAHELELNNLGLS-SLPELPPH---LESLVASCNSLT-ELPELPQSLKSLLVD 119
Query: 474 NVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI 533
N + L+ LP + YL +SNN L LP E+ N L +D+ N + ++
Sbjct: 120 NNNLKALSD-LPPLL-------EYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KL 168
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY 593
P SLE++ N +P L +L + + +N+L ++P + LE
Sbjct: 169 PDLP---PSLEFIAAGNNQLE-ELP-ELQNLPFLTAIYADNNSLK-KLPDLPLS---LES 219
Query: 594 LNISSNHFEGKVPTKGVFSNKTRISLSGN 622
+ +N E ++P T I N
Sbjct: 220 IVAGNNILE-ELPELQNLPFLTTIYADNN 247
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-25
Identities = 71/428 (16%), Positives = 131/428 (30%), Gaps = 88/428 (20%)
Query: 73 RHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLAN 132
++ +L L N + L +L L N +P L L
Sbjct: 69 LDRQAHELELNNLGLS-SLPELPPHLESLVA----SCNSLTELPELPQSLKSLLVDNNNL 123
Query: 133 NSFSGKIPT---------------NLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKL 177
+ S P L S L N+L ++ LE +
Sbjct: 124 KALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPP----SLEFI 178
Query: 178 SIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVP 237
+ +N L +LP + NL L I + N L ++P+ L + + N
Sbjct: 179 AAGNNQLE-ELP-ELQNLPFLTAIYADNNSLK-KLPDLPLSLES---IVAGNNILE--EL 230
Query: 238 PSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM 297
P + NL L +Y N L +LP P L + +N + +P + + L +
Sbjct: 231 PELQNLPFLTTIYADNNLLK-TLP----DLPPSLEALNVRDNYLTD-LPELPQSLTFLDV 284
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG------------NGAANDLDFITPLTN 345
+ + S NL +L + N + N + N L + L
Sbjct: 285 SENIFSGLS-------ELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL-- 335
Query: 346 CSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDL 405
+L L N +P NL Q+++ N + P ++ +L
Sbjct: 336 PPRLERLIASFNHLA-EVPELPQNLK----QLHVEYNPLR-EFPDIPESVEDLRM----N 385
Query: 406 NQLTGTIPHEIGKLT-----------------NLQLLYLDFNLLEGSIPFSLGNLTLLTE 448
+ L +P L +++ L ++ + F+ L +
Sbjct: 386 SHLA-EVPELPQNLKQLHVETNPLREFPDIPESVEDLRMNSERVVDPYEFAHETTDKLED 444
Query: 449 LELQSNYL 456
+ ++
Sbjct: 445 DVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 2e-25
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 33/234 (14%)
Query: 389 PSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTE 448
P + N L + LT +P E + + Y ++ E + P G +
Sbjct: 5 PRNVSNT-FLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAV 62
Query: 449 LELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDS 508
L+ R L ++ L+ +LP+ ++ + L S N L
Sbjct: 63 SRLRDC-----------LDRQAHELELNNLGLS-SLPELPPHLES----LVASCNSLT-E 105
Query: 509 LPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVK 568
LP +L++L+ + + +S P LEYL +S N +P L + +K
Sbjct: 106 LPELPQSLKSLLVDNNNLKALSDLPP-------LLEYLGVSNNQLE-KLP-ELQNSSFLK 156
Query: 569 VLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
++D+ +N+L ++P + LE++ +N E ++P T I N
Sbjct: 157 IIDVDNNSLK-KLPDLPPS---LEFIAAGNNQLE-ELPELQNLPFLTAIYADNN 205
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 8e-38
Identities = 68/416 (16%), Positives = 126/416 (30%), Gaps = 35/416 (8%)
Query: 192 IGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYL 251
N + K+ V ++ L + + N L+++GN S + + LELL L
Sbjct: 6 KQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNL 65
Query: 252 RGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPI 311
N L +L ++ +L L + N ++ L N S +
Sbjct: 66 SSNVLYETLDLE---SLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISR---V 114
Query: 312 NFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLS 371
+ SR Q + LA N + D S++ L L N V +A S
Sbjct: 115 SCSRGQGKKNIYLANNKITMLRDLD------EGCRSRVQYLDLKLNEIDTVNFAELAASS 168
Query: 372 TTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNL 431
T +N+ N I + + L + N+L + E + + L N
Sbjct: 169 DTLEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNK 225
Query: 432 LEGSIPFSLGNLTLLTELELQSNYLQ-GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFN 490
L I +L L +L+ N G + + + ++ K L Q
Sbjct: 226 LV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKK---LTGQNEE 281
Query: 491 ITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQV-------SGEIPATLSACTSL 543
T+ D L L+ L + + + +
Sbjct: 282 ECTVPTLGHYGAYCCED---LPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQ 338
Query: 544 EYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
++ +R I ++ L+ L Q+ + L+ +
Sbjct: 339 REIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAV 394
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 1e-37
Identities = 62/432 (14%), Positives = 125/432 (28%), Gaps = 24/432 (5%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
R + + D+ L L + + +K +++ N LS L LN++ N
Sbjct: 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL 70
Query: 233 SGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+ +LS+L L L N + L P + A NN S +
Sbjct: 71 YE--TLDLESLSTLRTLDLNNNY-VQELL-----VGPSIETLHAANNNISRVSCSRGQG- 121
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
+ L N + ++ + +L L N + + ++F + L L
Sbjct: 122 --KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI-----DTVNFAELAASSDTLEHL 174
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412
L N V + +++ N+++ + + + + N+L I
Sbjct: 175 NLQYNFIYDV--KGQVVFAKLKT-LDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LI 229
Query: 413 PHEIGKLTNLQLLYLDFNLLE-GSIPFSLGNLTLLTELELQSN-YLQGNIPSSLGNCRSL 470
+ NL+ L N G++ + + Q+ L G
Sbjct: 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLG 289
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
L ++ + L + L E N E+D + Q
Sbjct: 290 HYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYR 349
Query: 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSF 590
I + L + + + + + ++ E S
Sbjct: 350 TVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQ-IELQHATEEQSP 408
Query: 591 LEYLNISSNHFE 602
L+ L +E
Sbjct: 409 LQLLRAIVKRYE 420
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 138 bits (348), Expect = 2e-34
Identities = 55/367 (14%), Positives = 120/367 (32%), Gaps = 31/367 (8%)
Query: 263 DIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWL 322
+I + + +++ + + + N+ LDL+ N S + + L L
Sbjct: 4 EIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELL 63
Query: 323 LLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRN 382
L+ N L L + S L L L N + + ++ N
Sbjct: 64 NLSSNVLYE--------TLDLESLSTLRTLDLNNNYV-----QELLVGPSIET-LHAANN 109
Query: 383 QISGTIPSGIG-NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEG-SIPFSL 440
IS + G N+ + N++T + G + +Q L L N ++ +
Sbjct: 110 NIS-RVSCSRGQGKKNIY---LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165
Query: 441 GNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDL 500
+ L L LQ N++ ++ + L +L++S NKL + + + ++ ++ L
Sbjct: 166 ASSDTLEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVT-WISL 221
Query: 501 SNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLS 560
NN L + + QNL D+ N + + ++ + + +
Sbjct: 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS-KNQRVQTVAKQTVKKLTGQN 279
Query: 561 LSSLKSVKVLDLSSNNLSGQIPKYLENLSFL-----EYLNISSNHFEGKVPTKGVFSNKT 615
+ + + + L L L+ + E + + +
Sbjct: 280 EEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQR 339
Query: 616 RISLSGN 622
I
Sbjct: 340 EIDALKE 346
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 9e-31
Identities = 64/461 (13%), Positives = 139/461 (30%), Gaps = 30/461 (6%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
R + + S+ L+ + ++ +DL+ N ++ ++L+ L L++N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV 69
Query: 135 FSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGN 194
+L S L + N + ++ +E L A+N+++ ++ S G
Sbjct: 70 LYE--TLDLESLSTLRTLDLNNNYV-QELLVGP-----SIETLHAANNNIS-RVSCSRGQ 120
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSG-NVPPSIYNLSSLELLYLRG 253
K I + N+++ G YL++ N+ N + +LE L L+
Sbjct: 121 G--KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
N + + + KL ++ N + + F + + + + L N +
Sbjct: 179 NFIYD---VKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKAL 233
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTT 373
QNL L GN G D + ++ + + L T
Sbjct: 234 RFSQNLEHFDLRGNGFHCGTLRDF-----FSKNQRVQTVAKQTVKK---LTGQNEEECTV 285
Query: 374 TVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTG----TIPHEIGKLTNLQLLYLDF 429
+ G L+ L L G + E + +
Sbjct: 286 PTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALK 345
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
I LE + L + + L L
Sbjct: 346 EQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQI-ELQHATE 404
Query: 490 NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
+ L L + + + + + + D+ +++ +
Sbjct: 405 EQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKET 445
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 9e-25
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 13/212 (6%)
Query: 412 IPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLL 471
I ++ + + L+ ++ + + EL+L N L + L L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 472 SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG 531
LN+S N L L + +++TL LDL+NN++ E+ ++ L + N +S
Sbjct: 62 LLNLSSNVLYETLD--LESLSTLR-TLDLNNNYVQ-----ELLVGPSIETLHAANNNIS- 112
Query: 532 EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSG-QIPKYLENLSF 590
+ S + + L+ N L V+ LDL N + + +
Sbjct: 113 RVSC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 591 LEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
LE+LN+ N V + VF+ + LS N
Sbjct: 171 LEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSN 201
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 2e-11
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 508 SLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSV 567
++ N ++ + + + + + +++ L+LS N L+ +
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 568 KVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
++L+LSSN L + LE+LS L L++++N+ +
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 8e-37
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLI 764
++G+G FG V G L L VAVK + L + + + F++E +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+++ +C + S G+ ++ +M+ G L +L +S + + L L +DIA
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 825 IEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IG 881
+EYL + + +H DL N +L DM V DFGL+K +Y+ D +
Sbjct: 160 MEYLSNRNF----LHRDLAARNCMLRDDMTVCVADFGLSKKIYS---GDYYRQGRIAKMP 212
Query: 882 IKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+K A E + + S DV++FG+ + E+
Sbjct: 213 VKWI----AIESLADRVYTSKS---DVWAFGVTMWEIA 243
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 9e-37
Identities = 67/426 (15%), Positives = 150/426 (35%), Gaps = 52/426 (12%)
Query: 212 IPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKL 271
I + L + ++I L++ +++ + + + LP + + ++
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNST-MRKLPAALLDSFRQV 71
Query: 272 TNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331
+ + +F+ + L + N P F + L+ L+L N+L +
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS 131
Query: 332 GAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSG 391
N KL L + N + + ++ + + N+++ +
Sbjct: 132 LPRG------IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN-LQLSSNRLT-HVD-- 181
Query: 392 IGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELEL 451
+ + +L + N L+ + ++ L N + + + LT L+L
Sbjct: 182 LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKL 233
Query: 452 QSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPL 511
Q N L + L N L+ +++S N+L + F
Sbjct: 234 QHNNLTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFV--------------------- 269
Query: 512 EVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLD 571
+Q L L IS N++ + +L+ L+LS+N + + ++ L
Sbjct: 270 ---KMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLY 324
Query: 572 LSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYE 631
L N++ + L L+ L +S N ++ + +F N R ++ + C Y+
Sbjct: 325 LDHNSIV-TLK--LSTHHTLKNLTLSHNDWDC-NSLRALFRNVARPAVDDADQHCKIDYQ 380
Query: 632 LQLPSC 637
L+ C
Sbjct: 381 LEHGLC 386
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-29
Identities = 64/373 (17%), Positives = 128/373 (34%), Gaps = 35/373 (9%)
Query: 121 RLSRLDTLMLANNSFSGKIPTN-LSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSI 179
L+ + N++ K+P L + + + +I ++KL +
Sbjct: 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYM 100
Query: 180 ADNHLTGQLPASI-GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPP 238
N + LP + N+ +L V+ +E N LS L+++ N +
Sbjct: 101 GFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIED 158
Query: 239 SI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM 297
+SL+ L L NR + + + +P L + ++ N S + + +
Sbjct: 159 DTFQATTSLQNLQLSSNR-LTHVDLS---LIPSLFHANVSYNLLS-----TLAIPIAVEE 209
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
LD + N + + L+ L L NNL + L N L+ + L N
Sbjct: 210 LDASHNSINV---VRGPVNVELTILKLQHNNLTD--------TAWLLNYPGLVEVDLSYN 258
Query: 358 RFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIG 417
++ H + ++ + N++ + + L + N L +
Sbjct: 259 ELEKIMYHPFVKMQRLE-RLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQP 315
Query: 418 KLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQ 477
+ L+ LYLD N + ++ L L L N N +L R++ V
Sbjct: 316 QFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHNDWDCNSLRALF--RNVARPAVDD 370
Query: 478 NKLTGALPKQIFN 490
+ Q+ +
Sbjct: 371 ADQHCKIDYQLEH 383
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 8e-26
Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 25/299 (8%)
Query: 331 NGAANDLDFITPLTNCSKLIAL-GLYGNRFGGVLPHSIANLSTTTVQI-NMGRNQISGTI 388
N ++ +N ++ + + +++ +I + + +
Sbjct: 2 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KL 60
Query: 389 PSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLL 446
P+ + + + ++ Q+ I +Q LY+ FN + P N+ LL
Sbjct: 61 PAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119
Query: 447 TELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
T L L+ N L N L +L++S N L + F TT L LS+N L
Sbjct: 120 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT 178
Query: 507 DSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKS 566
+++ + +L ++S N +S TL+ ++E L+ S+NS +
Sbjct: 179 H---VDLSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSINV---VRGPVNVE 227
Query: 567 VKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
+ +L L NNL+ +L N L +++S N E K+ F R + +S N
Sbjct: 228 LTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELE-KIM-YHPFVKMQRLERLYISNN 282
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 49/289 (16%), Positives = 103/289 (35%), Gaps = 32/289 (11%)
Query: 74 HQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLMLAN 132
+ KLY+ +I + N+ L ++ L N+ ++P + +L TL ++N
Sbjct: 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSN 150
Query: 133 NSFSGKIPTN-LSGCSNLINFLAHGNNLVGQIAANIGYNWM-RLEKLSIADNHLTGQLPA 190
N+ +I + ++L N N L ++ + + L +++ N L+
Sbjct: 151 NNLE-RIEDDTFQATTSLQNLQLSSNRL-----THVDLSLIPSLFHANVSYNLLS----- 199
Query: 191 SIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250
++ ++ ++ N ++ +L L + N + + N L +
Sbjct: 200 TLAIPIAVEELDASHNSINVVRGPVNVELT---ILKLQHNNLTD--TAWLLNYPGLVEVD 254
Query: 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP 310
L N + + + + +L I+ N + L +LDL+ N V
Sbjct: 255 LSYNE-LEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVE 311
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRF 359
N + L L L N++ L+ L L L N +
Sbjct: 312 RNQPQFDRLENLYLDHNSIVT---------LKLSTHHTLKNLTLSHNDW 351
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 1e-36
Identities = 77/335 (22%), Positives = 127/335 (37%), Gaps = 56/335 (16%)
Query: 243 LSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNL 302
+ +L + + L +LP + +T VI +NN + +P L L+++
Sbjct: 39 NNGNAVLNVGESGL-TTLPDCLP---AHITTLVIPDNNLTS-LPALPPE---LRTLEVSG 90
Query: 303 NLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGV 362
N + +P+ L LS +L S L L ++GN+
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLP-------------ALPSGLCKLWIFGNQLT-S 135
Query: 363 LPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422
LP L ++++ NQ++ ++P+ L L NQLT ++P L
Sbjct: 136 LPVLPPGLQ----ELSVSDNQLA-SLPALPSELCKLW---AYNNQLT-SLPMLPS---GL 183
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG 482
Q L + N L S+P L L + L P+ L L VS N+LT
Sbjct: 184 QELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSL----PALPSG---LKELIVSGNRLT- 234
Query: 483 ALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTS 542
+LP + L +S N L SLP+ L L + RNQ++ +P +L +S
Sbjct: 235 SLPVLPSELKEL----MVSGNRL-TSLPMLPSGLL---SLSVYRNQLT-RLPESLIHLSS 285
Query: 543 LEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
+NL N +L + S S +
Sbjct: 286 ETTVNLEGNPLSERTLQALREITS---APGYSGPI 317
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 2e-35
Identities = 73/404 (18%), Positives = 132/404 (32%), Gaps = 104/404 (25%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
L++ ++ LT LP + + + + +N L+ +P +LR L ++GNQ +
Sbjct: 42 NAVLNVGESGLT-TLPDCLPAH--ITTLVIPDNNLT-SLPALPPELRT---LEVSGNQLT 94
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
++P L L + L S
Sbjct: 95 -SLPVLPPGLLELSIFSNPLTHLPALP--------------------------------S 121
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
L L + N + +P L L ++ N L +
Sbjct: 122 GLCKLWIFGNQLT-SLP---VLPPGLQELSVSDNQLAS---------------------- 155
Query: 354 LYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIP 413
LP + L ++ NQ++ ++P L L+ + NQL ++P
Sbjct: 156 ---------LPALPSEL----CKLWAYNNQLT-SLPMLPSGLQELS---VSDNQLA-SLP 197
Query: 414 HEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473
+L L S+P L EL + N L ++P L L
Sbjct: 198 TLPSELYKLWAYNNRLT----SLPALPSGLK---ELIVSGNRLT-SLPVLPSE---LKEL 246
Query: 474 NVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI 533
VS N+LT +LP + +L + N L LP + +L + +++ N +S
Sbjct: 247 MVSGNRLT-SLPMLPSGLLSL----SVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 300
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
L TS + F S+ + + L L++ +
Sbjct: 301 LQALREITSAPGYSGPIIRFD---MAGASAPRETRALHLAAADW 341
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 130 bits (327), Expect = 3e-31
Identities = 68/309 (22%), Positives = 114/309 (36%), Gaps = 62/309 (20%)
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
+ + L + + L L P + + L + N LP L
Sbjct: 34 MRACLNNGNAVLNVGESGL-----TTL----PDCLPAHITTLVIPDNNLT-SLPALPPEL 83
Query: 371 STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
T + + NQ++ ++P L+ L+ F L L + L L++ N
Sbjct: 84 RT----LEVSGNQLT-SLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLWIFGN 131
Query: 431 LLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFN 490
L S+P L EL + N L ++P+ L L N+LT +LP
Sbjct: 132 QLT-SLPVLPPGLQ---ELSVSDNQLA-SLPALPSE---LCKLWAYNNQLT-SLPMLPSG 182
Query: 491 ITTLSLYLDLSNNFLNDSLPLEVGNLQ-----------------NLVELDISRNQVSGEI 533
+ L +S+N L SLP L L EL +S N+++ +
Sbjct: 183 LQEL----SVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLT-SL 236
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY 593
P + L+ L +S N +P+ S L S L + N L+ ++P+ L +LS
Sbjct: 237 PVLP---SELKELMVSGNRLTS-LPMLPSGLLS---LSVYRNQLT-RLPESLIHLSSETT 288
Query: 594 LNISSNHFE 602
+N+ N
Sbjct: 289 VNLEGNPLS 297
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-30
Identities = 79/411 (19%), Positives = 139/411 (33%), Gaps = 55/411 (13%)
Query: 121 RLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIA 180
+ L + + + +P L +++ + NNL + A L L ++
Sbjct: 38 LNNGNAVLNVGESGLT-TLPDCL--PAHITTLVIPDNNLT-SLPALPP----ELRTLEVS 89
Query: 181 DNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
N LT LP L L + + L P L L I GNQ + ++P
Sbjct: 90 GNQLT-SLPVLPPGLLELSIFSNPLTHL----PALPSGLCK---LWIFGNQLT-SLPVLP 140
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
L L + N+L SLP +L N + +P S L L +
Sbjct: 141 PGLQEL---SVSDNQL-ASLPALPS----ELCKLWAYNNQLTS-LPMLPSG---LQELSV 188
Query: 301 NLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG 360
+ N + +P S L L N L + L S L L + GNR
Sbjct: 189 SDNQLA-SLPTLPSELYKLWAY-----------NNRLTSLPAL--PSGLKELIVSGNRLT 234
Query: 361 GVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLT 420
LP + L + + N+++ ++P L++L+ + NQLT +P + L+
Sbjct: 235 S-LPVLPSELKE----LMVSGNRLT-SLPMLPSGLLSLS---VYRNQLT-RLPESLIHLS 284
Query: 421 NLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKL 480
+ + L+ N L +L +T S+ R+L + L
Sbjct: 285 SETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAA--ADWL 342
Query: 481 TGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG 531
A + ++ N + +N ++ + Q+S
Sbjct: 343 VPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISS 393
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 5e-23
Identities = 67/351 (19%), Positives = 119/351 (33%), Gaps = 47/351 (13%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
+T L + + ++ L L L + N ++P L L
Sbjct: 61 AHITTLVIPDNNLT-SLPALPPELRTLEV----SGNQLTSLPVLPPGLLELSIFSNPLTH 115
Query: 135 FSGKIPTNL--------------SGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIA 180
+P+ L L L+ +N + + A L KL
Sbjct: 116 LP-ALPSGLCKLWIFGNQLTSLPVLPPGLQE-LSVSDNQLASLPALPS----ELCKLWAY 169
Query: 181 DNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
+N LT LP L L +V +N+L+ +P +L L N+ + ++P
Sbjct: 170 NNQLT-SLPMLPSGLQEL---SVSDNQLA-SLPTLPSELYK---LWAYNNRLT-SLPALP 220
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
S L+ L + GNRL SLP+ +L +++ N + +P S L+ L +
Sbjct: 221 ---SGLKELIVSGNRL-TSLPVLPS----ELKELMVSGNRLTS-LPMLP---SGLLSLSV 268
Query: 301 NLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG 360
N + ++P + L + + + L GN L L IT S I
Sbjct: 269 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASA 327
Query: 361 GVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGT 411
++ + + G N + F + L++L+ T
Sbjct: 328 PRETRALHLAAADWLVPAREGEPAPADRWHMFGQEDNADAFSLFLDRLSET 378
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 9e-11
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 18/125 (14%)
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
L++ + L +LP + ++ L I N ++ +PA L L +S N +
Sbjct: 45 LNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPALP---PELRTLEVSGNQLTS-L 96
Query: 558 PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRI 617
P+ L + + +L L L I N +P +
Sbjct: 97 PVLPPGLLELSIFSNPLTHLPALPSG-------LCKLWIFGNQLT-SLPVL--PPGLQEL 146
Query: 618 SLSGN 622
S+S N
Sbjct: 147 SVSDN 151
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 5e-36
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVL--NLTRKGAFKSFVAECEALRNIRHRNLI 764
M+G+G FG V L + VAVK+L ++ + F+ E ++ H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 765 KIITICSSIDSHGVDFKAL-VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
K++ + + G + + +M++G L +L S + +L L + +DIA
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 824 AIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--I 880
+EYL + IH DL N +L DM V DFGL++ +Y+ D + +
Sbjct: 149 GMEYLSSRNF----IHRDLAARNCMLAEDMTVCVADFGLSRKIYS---GDYYRQGCASKL 201
Query: 881 GIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+K A E + + S DV++FG+ + E+
Sbjct: 202 PVKWL----ALESLADNLYTVHS---DVWAFGVTMWEIM 233
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 143 bits (361), Expect = 1e-35
Identities = 68/389 (17%), Positives = 141/389 (36%), Gaps = 28/389 (7%)
Query: 212 IPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKL 271
I + L + ++I L++ +++ + + + LP + + ++
Sbjct: 19 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNST-MRKLPAALLDSFRQV 77
Query: 272 TNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331
+ + +F+ + L + N P F + L+ L+L N+L +
Sbjct: 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS 137
Query: 332 GAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSG 391
N KL L + N + + ++ + + N+++ +
Sbjct: 138 LPRG------IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN-LQLSSNRLT-HVD-- 187
Query: 392 IGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELEL 451
+ + +L + N L+ + ++ L N + + + LT L+L
Sbjct: 188 LSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKL 239
Query: 452 QSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPL 511
Q N L + L N L+ +++S N+L + F L +SNN L +L L
Sbjct: 240 QHNNLTD--TAWLLNYPGLVEVDLSYNELE-KIMYHPFVKMQRLERLYISNNRLV-ALNL 295
Query: 512 EVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLD 571
+ L LD+S N + + LE L L +NS L LS+ ++K L
Sbjct: 296 YGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV---TLKLSTHHTLKNLT 351
Query: 572 LSSNNLSG-QIPKYLENLSFLEYLNISSN 599
LS N+ + N++ + +
Sbjct: 352 LSHNDWDCNSLRALFRNVARPAVDDADQH 380
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-30
Identities = 82/503 (16%), Positives = 170/503 (33%), Gaps = 56/503 (11%)
Query: 104 IDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTN-LSGCSNLINFLAHGNNLVGQ 162
ID+ + Y L+ + N++ K+P L + + + +
Sbjct: 34 IDMQTQDVYFGFED--ITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE-E 89
Query: 163 IAANIGYNWMRLEKLSIADNHLTGQLPASI-GNLSVLKVINVEENRLSGRIPNTLGQLRN 221
I ++KL + N + LP + N+ +L V+ +E N LS
Sbjct: 90 IDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 148
Query: 222 SFYLNIAGNQFSGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENN 280
L+++ N + +SL+ L L NR + + + +P L + ++ N
Sbjct: 149 LTTLSMSNNNLE-RIEDDTFQATTSLQNLQLSSNR-LTHVDLS---LIPSLFHANVSYNL 203
Query: 281 FSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFI 340
S + + + LD + N + + L+ L L NNL +
Sbjct: 204 LS-----TLAIPIAVEELDASHNSINV---VRGPVNVELTILKLQHNNLTD--------T 247
Query: 341 TPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNG 400
L N L+ + L N ++ H + ++ + N++ + + L
Sbjct: 248 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE-RLYISNNRLV-ALNLYGQPIPTLKV 305
Query: 401 FGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNI 460
+ N L + + L+ LYLD N + ++ L L L N N
Sbjct: 306 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKL--STHHTLKNLTLSHNDWDCNS 361
Query: 461 PSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLV 520
+L R++ V + Q+ + L S+ D L+ L ++V
Sbjct: 362 LRAL--FRNVARPAVDDADQHCKIDYQLEH----GLCCKESDKPYLD-RLLQYIALTSVV 414
Query: 521 ELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ 580
E ++ C++ + +N + L+ + L+ N L +
Sbjct: 415 E----------KVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAE 464
Query: 581 IPKY----LENLSFLEYLNISSN 599
+ + ++ L+ L+ +
Sbjct: 465 VQQLTNEQIQQEQLLQGLHAEID 487
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-24
Identities = 54/237 (22%), Positives = 84/237 (35%), Gaps = 13/237 (5%)
Query: 387 TIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLL 446
I S + ID+ E L N +++ + + L + +
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77
Query: 447 TELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
L L ++ + ++ L + N + LP +F L L L N L+
Sbjct: 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS 136
Query: 507 DSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLK 565
SLP + N L L +S N + T A TSL+ L LS N + LS +
Sbjct: 137 -SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIP 192
Query: 566 SVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
S+ ++S N LS L +E L+ S N V V T + L N
Sbjct: 193 SLFHANVSYNLLST-----LAIPIAVEELDASHNSIN-VVR-GPVNVELTILKLQHN 242
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 78.8 bits (194), Expect = 3e-15
Identities = 78/546 (14%), Positives = 170/546 (31%), Gaps = 73/546 (13%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLMLANNSFS 136
KLY+ +I + N+ L ++ L N+ ++P + +L TL ++NN+
Sbjct: 102 QKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLE 160
Query: 137 GKIPTN-LSGCSNLINFLAHGNNLVGQIAANIGYNWM-RLEKLSIADNHLTGQLPASIGN 194
+I + ++L N N L ++ + + L +++ N L+ ++
Sbjct: 161 -RIEDDTFQATTSLQNLQLSSNRL-----THVDLSLIPSLFHANVSYNLLS-----TLAI 209
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLR------NSF-------------YLNIAGNQFSGN 235
++ ++ N ++ +L N+ ++++ N+
Sbjct: 210 PIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKI 269
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
+ + LE LY+ NR + +L + +P L ++ N+ + + L
Sbjct: 270 MYHPFVKMQRLERLYISNNR-LVALNLYGQ-PIPTLKVLDLSHNHLLH-VERNQPQFDRL 326
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
L L+ N + S L L L+ N+ +C+ L AL
Sbjct: 327 ENLYLDHNSIV---TLKLSTHHTLKNLTLSHNDW---------------DCNSLRAL--- 365
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHE 415
F V ++ + + + ++ I L + +
Sbjct: 366 ---FRNVARPAVDDADQHCKIDYQLEHGL--CCKESDKPYLDRLLQYIALTSVVEKVQRA 420
Query: 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV 475
G+ + + +L L +LE + N L+ + L + +
Sbjct: 421 QGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAEVQ-------QLTNEQI 473
Query: 476 SQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS-GEIP 534
Q +L L +I +D+L +L+ + Q E
Sbjct: 474 QQEQLLQGLHAEIDTNLRRYRLPKDGLARSSDNLNKVFTHLKERQAFKLRETQARRTEAD 533
Query: 535 ATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYL 594
A LE N++ + + L + K N
Sbjct: 534 AKQKETEDLEQENIALEKQLDNK--RAKQAELRQETSLKRQKVKQLEAKKNRNPDTRRVS 591
Query: 595 NISSNH 600
+ +H
Sbjct: 592 HHHHHH 597
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 10/79 (12%), Positives = 27/79 (34%)
Query: 524 ISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
R I + L +++ + +L + K++ ++ +
Sbjct: 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAA 69
Query: 584 YLENLSFLEYLNISSNHFE 602
L++ +E LN++ E
Sbjct: 70 LLDSFRQVELLNLNDLQIE 88
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 1e-35
Identities = 64/219 (29%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNL 763
+ IG+G+FG V+ G L LVAVK F+ E L+ H N+
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+++I +C+ +V E +Q G +L + L + L + D A
Sbjct: 175 VRLIGVCTQKQPI-----YIVMELVQGGDFLTFL-RTEGAR----LRVKTLLQMVGDAAA 224
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG-- 881
+EYL IH DL N L+ V + DFG+++ D V S +
Sbjct: 225 GMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA----DGVYAASGGLRQV 277
Query: 882 -IKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+K T APE YG S S DV+SFGILL E F
Sbjct: 278 PVKWT----APEALNYGRYSSES---DVWSFGILLWETF 309
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-35
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITI 769
IG+GSF VY+G+ E + VA L + K + F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD- 92
Query: 770 CSSIDSHGVDFKALVY-EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
S + ++ E M +G+L+ +L + V + +++ I +++L
Sbjct: 93 -SWESTVKGKKCIVLVTELMTSGTLKTYLK----RFKVMKIKVLRS--WCRQILKGLQFL 145
Query: 829 HHHCQPPIIHGDLKPSNVLLDH-DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
H PPIIH DLK N+ + +GD GLA S + + GT
Sbjct: 146 HTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---------RASFAKAVIGTPE 195
Query: 888 YVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
++APE + + DVY+FG+ +LEM + P
Sbjct: 196 FMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYP 228
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 4e-34
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+IG+G FG VY G + + A+K L+ +T ++F+ E +R + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+I I G+ ++ YM +G L +++ ++ + + +A +
Sbjct: 87 LIGIML--PPEGLPH--VLLPYMCHGDLLQFIRSPQRN-----PTVKDLISFGLQVARGM 137
Query: 826 EYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS-IGIK 883
EYL +H DL N +LD V DFGLA+ + + V+ + + +K
Sbjct: 138 EYLAEQKF----VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 884 GTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
T A E + S DV+SFG+LL E+
Sbjct: 194 WT----ALESLQTYRFTTKS---DVWSFGVLLWELL 222
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 4e-34
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 666 CFIVVYARRRRFVHKSSVTSPMEQQFPIVSYA-ELSKATGEFSTSNMIGQGSFGFVYRGI 724
F + + + P S+ E+ + +IG G G V G
Sbjct: 15 YFQGKLPEPQFYAEPHTYEEPGR---AGRSFTREIEAS--RIHIEKIIGSGDSGEVCYGR 69
Query: 725 L---GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDF 780
L G+ + VA+K L + + F++E + H N+I++ + +
Sbjct: 70 LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA---- 125
Query: 781 KALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGD 840
+V EYM+NGSL+ +L + Q +++Q + + + + YL +H D
Sbjct: 126 -MIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGMRYLSDLG---YVHRD 176
Query: 841 LKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE---YGMGS 897
L NVL+D ++V V DFGL++ L DD + ++ G K + + APE + S
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLE----DDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 898 EASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
AS DV+SFG+++ E+ +RP +M N
Sbjct: 233 SAS---DVWSFGVVMWEVLAYGERPYWNMTN 260
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 4e-34
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+IG+G FG VY G L + AVK LN +T G F+ E +++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ IC + + +V YM++G L ++ + ++ + + +A +
Sbjct: 91 LLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGM 141
Query: 826 EYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS-IGIK 883
+YL +H DL N +LD V DFGLA+ +Y + V + + + +K
Sbjct: 142 KYLASKKF----VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 884 GTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
A E + S DV+SFG+LL E+
Sbjct: 198 WM----ALESLQTQKFTTKS---DVWSFGVLLWELM 226
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-34
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIR 759
EF ++G G+FG VY+G+ + + VA+K L T A K + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ ++ +++ IC + L+ + M G L +++ D + L+ +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDN-----IGSQYLLNWCV 124
Query: 820 DIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
IA + YL +H DL NVL+ + DFGLAK L ++ E +
Sbjct: 125 QIAKGMNYLEDRRL----VHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEYHAE 177
Query: 879 SIGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
G K + ++A E + + + S DV+S+G+ + E+ +P D +
Sbjct: 178 --GGKVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIPA 225
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 5e-34
Identities = 46/279 (16%), Positives = 99/279 (35%), Gaps = 17/279 (6%)
Query: 345 NCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGID 404
N ++ + + L + +++ N +S + + L +
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKE-LDLSGNPLSQISAADLAPFTKLELLNLS 66
Query: 405 LNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSL 464
N L ++ L+ L+ L L+ N ++ L + L +N + + S
Sbjct: 67 SNVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS-RVSCSR 118
Query: 465 GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLND-SLPLEVGNLQNLVELD 523
G + ++ ++ NK+T + + YLDL N ++ + + L L+
Sbjct: 119 G--QGKKNIYLANNKITMLRDLDEGCRSRVQ-YLDLKLNEIDTVNFAELAASSDTLEHLN 175
Query: 524 ISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
+ N + ++ + L+ L+LS N + S V + L +N L I K
Sbjct: 176 LQYNFIY-DVKGQVV-FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEK 231
Query: 584 YLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
L LE+ ++ N F N+ +++
Sbjct: 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 9e-33
Identities = 57/316 (18%), Positives = 113/316 (35%), Gaps = 24/316 (7%)
Query: 285 IPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLT 344
I N + + + + + N+ L L+GN L +A D L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAAD------LA 55
Query: 345 NCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGID 404
+KL L L N L + +LST +++ N + + G ++ L+
Sbjct: 56 PFTKLELLNLSSNVLYETLD--LESLSTLRT-LDLNNNYVQ-ELLVGP-SIETLH---AA 107
Query: 405 LNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQG-NIPSS 463
N ++ + + +YL N + G + + L+L+ N + N
Sbjct: 108 NNNIS-RVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164
Query: 464 LGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELD 523
+ +L LN+ N + + Q+ L LDLS+N L + E + + +
Sbjct: 165 AASSDTLEHLNLQYNFIY-DVKGQVV-FAKLK-TLDLSSNKLA-FMGPEFQSAAGVTWIS 220
Query: 524 ISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
+ N++ I L +LE+ +L N F L K+ +V ++ + +
Sbjct: 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVKKLTGQ 278
Query: 584 YLENLSFLEYLNISSN 599
E + + +
Sbjct: 279 NEEECTVPTLGHYGAY 294
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 8e-32
Identities = 49/368 (13%), Positives = 102/368 (27%), Gaps = 54/368 (14%)
Query: 212 IPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKL 271
I + + + + +++ L L GN + +
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNP-LSQIS---------- 50
Query: 272 TNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN 331
+ + L +L+L+ N+ ++ L L L L N
Sbjct: 51 --------------AADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLDLNNNY--- 91
Query: 332 GAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSG 391
+ L + L N V I + N+I+
Sbjct: 92 --------VQELLVGPSIETLHAANNNISRVSCSRGQGKK----NIYLANNKITMLRDLD 139
Query: 392 IGNLVNLNGFGIDLNQLTG-TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELE 450
G + + LN++ L+ L L +N + + L L+
Sbjct: 140 EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVK-GQVVFAKLKTLD 197
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
L SN L + + + +++ NKL + K + L + DL N +
Sbjct: 198 LSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLE-HFDLRGNGFH-CGT 253
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVL 570
L +N +++ V CT + L + + +++
Sbjct: 254 LRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCE-----DLPAPFADRLI 308
Query: 571 DLSSNNLS 578
L ++
Sbjct: 309 ALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-30
Identities = 49/254 (19%), Positives = 86/254 (33%), Gaps = 27/254 (10%)
Query: 388 IPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLT 447
I N + + L + N++ L L N L L T L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 448 ELELQSN-----------------YLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFN 490
L L SN L N L S+ +L+ + N ++ +
Sbjct: 62 LLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS-RVSCSRGQ 120
Query: 491 ITTLSL-YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG-EIPATLSACTSLEYLNL 548
+ L+NN + L+ G + LD+ N++ ++ +LE+LNL
Sbjct: 121 ----GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176
Query: 549 SYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTK 608
YN + +K LDLSSN L+ + ++ + + ++++ +N
Sbjct: 177 QYNFIY-DVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVLIEKAL 233
Query: 609 GVFSNKTRISLSGN 622
N L GN
Sbjct: 234 RFSQNLEHFDLRGN 247
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-29
Identities = 60/355 (16%), Positives = 106/355 (29%), Gaps = 51/355 (14%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
R + + D+ L L + + +K +++ N LS L LN++ N
Sbjct: 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL 70
Query: 233 SGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+ +LS+L L L N +
Sbjct: 71 YE--TLDLESLSTLRTLDLNNNYV------------------------------QELLVG 98
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
++ L N S ++ SR Q + LA N + D S++ L
Sbjct: 99 PSIETLHAANNNISR---VSCSRGQGKKNIYLANNKITMLRDLD------EGCRSRVQYL 149
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412
L N V +A S T +N+ N I + + L + N+L +
Sbjct: 150 DLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FM 206
Query: 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ-GNIPSSLGNCRSLL 471
E + + L N L I +L L +L+ N G + + +
Sbjct: 207 GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265
Query: 472 SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG-NLQNLVELDIS 525
++ K ++ + TL Y + + LP L L
Sbjct: 266 TVAKQTVKKLTGQNEEECTVPTLGHY----GAYCCEDLPAPFADRLIALGHHHHH 316
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 435 SIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTL 494
+I N ++ + L+ + S + ++ L++S N L+ + T L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 495 SLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFR 554
L+LS+N L ++L L +L L LD++ N V L S+E L+ + N+
Sbjct: 61 -ELLNLSSNVLYETLDL--ESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNIS 112
Query: 555 GGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNK 614
+S S + K + L++N ++ S ++YL++ N + V + ++
Sbjct: 113 R---VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASS 168
Query: 615 TR---ISLSGN 622
++L N
Sbjct: 169 DTLEHLNLQYN 179
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-23
Identities = 51/370 (13%), Positives = 110/370 (29%), Gaps = 74/370 (20%)
Query: 97 NLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHG 156
N + ++ + D++ L +
Sbjct: 8 NGNRYKIEKVTDSS-----------LKQAL------------------------------ 26
Query: 157 NNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTL 216
A++ + +++L ++ N L+ A + + L+++N+ N L + L
Sbjct: 27 --------ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE-TLD-L 76
Query: 217 GQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVI 276
L L++ N + S+E L+ N I + N +
Sbjct: 77 ESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNN-ISRVSCSR---GQGKKNIYL 127
Query: 277 AENNFSGPIPNSFSNTSNLVMLDLNLN-LFSGKVPINFSRLQNLSWLLLAGNNLGNGAAN 335
A N + S + LDL LN + + + L L L N + +
Sbjct: 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD---- 183
Query: 336 DLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNL 395
+ +KL L L N+ + + + T I++ N++ I +
Sbjct: 184 ----VKGQVVFAKLKTLDLSSNKL-AFMGPEFQSAAGVTW-ISLRNNKLV-LIEKALRFS 236
Query: 396 VNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNY 455
NL F + N N ++ + ++ + + L Y
Sbjct: 237 QNLEHFDLRGNGFH-CGTLRDFFSKNQRVQTVAKQTVK-KLTGQNEEECTVPTLGHYGAY 294
Query: 456 LQGNIPSSLG 465
++P+
Sbjct: 295 CCEDLPAPFA 304
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 2e-21
Identities = 45/256 (17%), Positives = 95/256 (37%), Gaps = 17/256 (6%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
R + + S+ L+ + ++ +DL+ N ++ ++L+ L L++N
Sbjct: 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV 69
Query: 135 FSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGN 194
+L S L + N + ++ +E L A+N+++ ++ S G
Sbjct: 70 LYE--TLDLESLSTLRTLDLNNNYV-QELLVGP-----SIETLHAANNNIS-RVSCSRGQ 120
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSG-NVPPSIYNLSSLELLYLRG 253
K I + N+++ G YL++ N+ N + +LE L L+
Sbjct: 121 G--KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
N + + + KL ++ N + + F + + + + L N +
Sbjct: 179 NFIYD---VKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKAL 233
Query: 314 SRLQNLSWLLLAGNNL 329
QNL L GN
Sbjct: 234 RFSQNLEHFDLRGNGF 249
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 6e-34
Identities = 87/470 (18%), Positives = 166/470 (35%), Gaps = 35/470 (7%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
L+I+ N+++ + I +LS L+++ + NR+ + + YL+++ N+
Sbjct: 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV 82
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLT-LPKLTNFVIAENNFSGPIPNSFSNT 292
S + +L+ L L N +LPI + +L ++ + ++
Sbjct: 83 K---ISCHPTVNLKHLDLSFNAF-DALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHL 138
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
+ +L + + + LQ+ + L N + + ++ + + L
Sbjct: 139 NISKVLLVLGETYG--EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVS-VKTVANLELS 195
Query: 353 GLYGNRFGGVLPHSIANLST-----TTVQINMGRNQISGTIPSGIGNLV---NLNGFGID 404
+ + ++ L+ + + + + I LV + F I
Sbjct: 196 NIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSIS 255
Query: 405 LNQLTGTIPHEIG-----KLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGN 459
+L G + L L + + ++ + + + + +
Sbjct: 256 NVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMV 315
Query: 460 IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG---NL 516
L L+ S N LT + T L L N L L +
Sbjct: 316 HMLCPSKISPFLHLDFSNNLLT-DTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQM 373
Query: 517 QNLVELDISRNQ-VSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSN 575
++L +LDIS+N E S SL LN+S N I L +KVLDL SN
Sbjct: 374 KSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSN 431
Query: 576 NLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNK---TRISLSGN 622
+ IPK + L L+ LN++SN K G+F +I L N
Sbjct: 432 KIK-SIPKQVVKLEALQELNVASNQL--KSVPDGIFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 1e-33
Identities = 86/467 (18%), Positives = 165/467 (35%), Gaps = 19/467 (4%)
Query: 123 SRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADN 182
+ L ++ N S +++ S L L +N + + ++ LE L ++ N
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKL-RILIISHNRIQYLDISVFKFNQELEYLDLSHN 79
Query: 183 HLTGQLPASIGNLSVLKVINVEENRL-SGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY 241
L S LK +++ N + I G + +L ++ + I
Sbjct: 80 KLVK---ISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA 136
Query: 242 NLSSLELLYLRGNRLIGSLPIDI--GLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLD 299
+L+ ++L + G + L F + S +NL + +
Sbjct: 137 HLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSN 196
Query: 300 LNLNLFSGKVPINFSRLQNL---SWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYG 356
+ L K S L L L N N I L + + +
Sbjct: 197 IKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISN 256
Query: 357 NRFGGVLPHSIANLSTTTVQI----NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTI 412
+ G L + S T+++ + + N+N ++
Sbjct: 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316
Query: 413 PHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ--GNIPSSLGNCRSL 470
K++ L NLL ++ + G+LT L L LQ N L+ I +SL
Sbjct: 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL 376
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
L++SQN ++ K + T L L++S+N L D++ + + LD+ N++
Sbjct: 377 QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKIK 434
Query: 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
IP + +L+ LN++ N + L S++ + L +N
Sbjct: 435 -SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 9e-24
Identities = 75/412 (18%), Positives = 140/412 (33%), Gaps = 38/412 (9%)
Query: 221 NSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENN 280
+ F ++ + N +VP + +L + N I L L+L KL +I+ N
Sbjct: 1 SEFLVDRSKNGLI-HVPKDL--SQKTTILNISQNY-ISELWTSDILSLSKLRILIISHNR 56
Query: 281 FSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFI 340
+ F L LDL+ N I+ NL L L+ N + L
Sbjct: 57 IQYLDISVFKFNQELEYLDLSHNKLVK---ISCHPTVNLKHLDLSFNAF-----DALPIC 108
Query: 341 TPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNG 400
N S+L LGL IA+L+ + V + +G L + N
Sbjct: 109 KEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGE---KEDPEGLQDFNT 165
Query: 401 FGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNI 460
+ + T H I ++ + L+ + ++ LE +I
Sbjct: 166 ESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCV-------------LEDNKCSYFLSI 212
Query: 461 PSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLS--LYLDLSNNFLNDSLPLEVG---- 514
+ L L +L ++ + T +I + + Y +SN L L
Sbjct: 213 LAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSG 272
Query: 515 -NLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLS 573
+L+ L + + +++ N + + R L S + LD S
Sbjct: 273 TSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFS 332
Query: 574 SNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVF---SNKTRISLSGN 622
+N L+ + + +L+ LE L + N + + + ++ +S N
Sbjct: 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 1e-16
Identities = 56/378 (14%), Positives = 114/378 (30%), Gaps = 51/378 (13%)
Query: 57 NNSINLCQWTGVTCGHRHQRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIP 116
+ + + + ++ N+ IL V ++ L L ++
Sbjct: 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207
Query: 117 HEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEK 176
+ + L++L T +N I T + ++ + H + +
Sbjct: 208 YFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVW-----------YFSISN 256
Query: 177 LSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNV 236
+ + S +L L + V + N N +
Sbjct: 257 VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316
Query: 237 PPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFS--GPIPNSFSNTSN 294
+S L N L + L +L ++ N I + +
Sbjct: 317 MLCPSKISPFLHLDFSNNLLT-DTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS 375
Query: 295 LVMLDLNLN-LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
L LD++ N + + + S ++L L ++ N L + L ++ L
Sbjct: 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--------PRIKVLD 427
Query: 354 LYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIP 413
L+ N+I +IP + L L + NQL ++P
Sbjct: 428 LH-------------------------SNKIK-SIPKQVVKLEALQELNVASNQLK-SVP 460
Query: 414 HEI-GKLTNLQLLYLDFN 430
I +LT+LQ ++L N
Sbjct: 461 DGIFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 1e-13
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
++ S+N L +PK + TT L++S N++++ ++ +L L L IS N++
Sbjct: 3 FLVDRSKNGLI-HVPKDLSQKTT---ILNISQNYISELWTSDILSLSKLRILIISHNRIQ 58
Query: 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL-SGQIPKYLENLS 589
+ LEYL+LS+N +S ++K LDLS N + I K N+S
Sbjct: 59 YLDISVFKFNQELEYLDLSHNKLVK---ISCHPTVNLKHLDLSFNAFDALPICKEFGNMS 115
Query: 590 FLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPS 636
L++L +S+ H E N +++ L L
Sbjct: 116 QLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 1e-08
Identities = 49/313 (15%), Positives = 98/313 (31%), Gaps = 15/313 (4%)
Query: 2 LKSISTSCLATLVCCFNLLLHSYAFAGVPSNETDRLALLAIKSQLHDPLGVTSSWNNSIN 61
L V L S + N+ + K Q + L + N
Sbjct: 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETT 233
Query: 62 LCQWTGVTCGHRHQRVTKLYLRNQSIGGILSPHVGNLSF-----LRLIDLADNNFYGNIP 116
+ + H V + N + G L + S L + + + F
Sbjct: 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQS 293
Query: 117 HEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEK 176
+ S ++ + S S L NNL+ + LE
Sbjct: 294 YIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPF-LHLDFSNNLLTDTVFENCGHLTELET 352
Query: 177 LSIADNHLTGQLPASIG---NLSVLKVINVEENRLSGRIP-NTLGQLRNSFYLNIAGNQF 232
L + N L +L + L+ +++ +N +S ++ LN++ N
Sbjct: 353 LILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNIL 411
Query: 233 SGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+ + + +++L L N++ S+P + + L L +A N F
Sbjct: 412 TDTIFRCL--PPRIKVLDLHSNKI-KSIPKQV-VKLEALQELNVASNQLKSVPDGIFDRL 467
Query: 293 SNLVMLDLNLNLF 305
++L + L+ N +
Sbjct: 468 TSLQKIWLHTNPW 480
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 8e-34
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 712 IGQGSFGFVYRGIL---GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKII 767
+G G FG V G L + + VA+K L + + + F+ E + H N+I++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + +V EYM+NGSL+ +L + Q ++IQ + + IA ++Y
Sbjct: 113 GVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKY 162
Query: 828 L-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
L +H DL N+L++ ++V V DFGL + L DD E ++ G K +
Sbjct: 163 LSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLE----DDPEAAYTTRGGKIPI 214
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
+ +PE Y + AS DV+S+GI+L E+ +RP M N
Sbjct: 215 RWTSPEAIAYRKFTSAS---DVWSYGIVLWEVMSYGERPYWEMSN 256
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 1e-33
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G FG V G VAVK L + E E LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
IC+ +G+ L+ E++ +GSL+E+L + ++ ++L Q+L A+ I ++
Sbjct: 89 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYAVQICKGMD 140
Query: 827 YLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YL +H DL NVL++ + +GDFGL K + D E +
Sbjct: 141 YLGSRQY----VHRDLAARNVLVESEHQVKIGDFGLTKAIE----TDKEYYTVKDDRDSP 192
Query: 886 VGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
V + APE AS DV+SFG+ L E+
Sbjct: 193 VFWYAPECLMQSKFYIAS---DVWSFGVTLHELL 223
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 2e-33
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 710 NMIGQGSFGFVYRGIL---GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+IG+G FG VY G L + AVK LN +T G F+ E +++ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
++ IC + + +V YM++G L ++ + ++ + + +A +
Sbjct: 155 LLGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGM 205
Query: 826 EYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS-IGIK 883
++L +H DL N +LD V DFGLA+ +Y + D V + + + +K
Sbjct: 206 KFLASKKF----VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 884 GTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
A E + S DV+SFG+LL E+
Sbjct: 262 WM----ALESLQTQKFTTKS---DVWSFGVLLWELM 290
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G+FG V G +VAVK L + + + F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+C S + L+ EY+ GSL ++L ++ + I+ L I +EY
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEY 129
Query: 828 LH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
L IH DL N+L++++ +GDFGL K L D E + +
Sbjct: 130 LGTKRY----IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEFFKVKEPGESPI 181
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ APE S AS DV+SFG++L E+F
Sbjct: 182 FWYAPESLTESKFSVAS---DVWSFGVVLYELF 211
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 3e-33
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G+FG V G LVAVK L + + F E + L+ + ++K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + LV EY+ +G L ++L + L + L + I +EY
Sbjct: 91 GVSYGPGRQSL---RLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEY 142
Query: 828 LH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG---IK 883
L C +H DL N+L++ + + DFGLAK L +D G I
Sbjct: 143 LGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIF 195
Query: 884 GTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE + S S DV+SFG++L E+F
Sbjct: 196 WY----APESLSDNIFSRQS---DVWSFGVVLYELF 224
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 4e-33
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRN 762
+ + + +G G +G VY G+ + L VAVK L ++ + F+ E ++ I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
L++++ +C+ ++ E+M G+L ++L N Q +S + L++A I+
Sbjct: 71 LVQLLGVCTREPP-----FYIITEFMTYGNLLDYLRECNRQE----VSAVVLLYMATQIS 121
Query: 823 YAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS-- 879
A+EYL + IH DL N L+ + + V DFGL++ + D T +
Sbjct: 122 SAMEYLEKKNF----IHRDLAARNCLVGENHLVKVADFGLSRLMT----GDTYTAHAGAK 173
Query: 880 IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
IK T APE Y S S DV++FG+LL E+
Sbjct: 174 FPIKWT----APESLAYNKFSIKS---DVWAFGVLLWEIA 206
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-33
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G+FG V G +VAVK L + + + F E E L++++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+C S + L+ EY+ GSL ++L ++ + I+ L I +EY
Sbjct: 109 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEY 160
Query: 828 LH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
L IH DL N+L++++ +GDFGL K L D E + +
Sbjct: 161 LGTKRY----IHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEYYKVKEPGESPI 212
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ APE S AS DV+SFG++L E+F
Sbjct: 213 FWYAPESLTESKFSVAS---DVWSFGVVLYELF 242
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 5e-33
Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 31/226 (13%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKI 766
IG G FG VY+G+L G+ + VA+K L + F+ E + H N+I++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ S ++ EYM+NG+L+++L + + S++Q + + IA ++
Sbjct: 112 EGVISKYKPM-----MIITEYMENGALDKFLREKDGE-----FSVLQLVGMLRGIAAGMK 161
Query: 827 YL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YL + + +H DL N+L++ ++V V DFGL++ L DD E ++ G K
Sbjct: 162 YLANMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLE----DDPEATYTTSGGKIP 213
Query: 886 VGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
+ + APE Y + AS DV+SFGI++ E+ +RP + N
Sbjct: 214 IRWTAPEAISYRKFTSAS---DVWSFGIVMWEVMTYGERPYWELSN 256
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 6e-33
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 30/229 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRN 762
+ + + +G G +G VY G+ + L VAVK L ++ + F+ E ++ I+H N
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPN 277
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
L++++ +C+ ++ E+M G+L ++L N Q +S + L++A I+
Sbjct: 278 LVQLLGVCT--REPPF---YIITEFMTYGNLLDYLRECNRQE----VSAVVLLYMATQIS 328
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
A+EYL IH +L N L+ + + V DFGL++ + D T + G
Sbjct: 329 SAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHA--GA 379
Query: 883 KGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
K + + APE Y S S DV++FG+LL E+ P +
Sbjct: 380 KFPIKWTAPESLAYNKFSIKS---DVWAFGVLLWEIATYGMSPYPGIDL 425
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 6e-33
Identities = 62/238 (26%), Positives = 90/238 (37%), Gaps = 41/238 (17%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL---GEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNI 758
+ +G GSFG V RG + VAVK L L++ A F+ E A+ ++
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 759 RHRNLIKIITICSS--IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
HRNLI++ + + + +V E GSL + L L
Sbjct: 79 DHRNLIRLYGVVLTPPM--------KMVTELAPLGSLLDRLRKHQGH-----FLLGTLSR 125
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
A+ +A + YL IH DL N+LL + +GDFGL + L +D
Sbjct: 126 YAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYV 179
Query: 877 SSSIG---IKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
APE S AS D + FG+ L EMF + P +
Sbjct: 180 MQEHRKVPFAWC----APESLKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNG 230
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 7e-33
Identities = 77/396 (19%), Positives = 143/396 (36%), Gaps = 40/396 (10%)
Query: 224 YLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSG 283
Y++++ N + S L L+ L + + + L L + N F
Sbjct: 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93
Query: 284 PIPNSFSNTSNLVMLDLNLN-LFSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFIT 341
+F+ +NL +L L L + N F L +L L+L NN+ + +
Sbjct: 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI-----KKIQPAS 148
Query: 342 PLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGF 401
N + L L N+ + + N + L ++
Sbjct: 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLL---------------RLSSITLQ 193
Query: 402 GIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP---FSLGNLTLLTELELQSNY--- 455
++ L K T++ L L N + S+ F T + L L ++Y
Sbjct: 194 DMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253
Query: 456 --LQGNIPSSLGNC-------RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
N + + ++S++K+ AL K +F+ T L L+ N +N
Sbjct: 254 SSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEIN 312
Query: 507 DSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLK 565
+ L +L++L++S+N + LE L+LSYN R S L
Sbjct: 313 -KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLP 371
Query: 566 SVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHF 601
++K L L +N L + L+ L+ + + +N +
Sbjct: 372 NLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 7e-28
Identities = 84/395 (21%), Positives = 147/395 (37%), Gaps = 32/395 (8%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIP-NTLGQLRNSFYLNIAGNQF 232
+ + ++ N + S L L+ + VE+ I NT L + L + NQF
Sbjct: 32 VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF 91
Query: 233 SGNVPPSIY-NLSSLELLYLRGNRLIGS-LPIDIGLTLPKLTNFVIAENNFSGPIPNS-F 289
+ + L++LE+L L L G+ L + L L V+ +NN P S F
Sbjct: 92 L-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFF 150
Query: 290 SNTSNLVMLDLNLNLFSGKVPINFSRLQ--NLSWLLLAGNNLGNGAANDLDFITP--LTN 345
N +LDL N + Q + + L L+ L + L +
Sbjct: 151 LNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFK 210
Query: 346 CSKLIALGLYGNRFGGVLP----HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGF 401
+ + L L GN F + +IA ++ ++ N S + + N
Sbjct: 211 NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFK 270
Query: 402 GIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP-FSLGNLTLLTELELQSNYLQGNI 460
G+ + + ++ L + + ++ + T L +L L N +
Sbjct: 271 GL--------------EASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEINKID 315
Query: 461 PSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNL 519
++ LL LN+SQN L ++ ++F LDLS N + +L + L NL
Sbjct: 316 DNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGLPNL 373
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLSYNSFR 554
EL + NQ+ TSL+ + L N +
Sbjct: 374 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 408
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 7e-26
Identities = 71/397 (17%), Positives = 135/397 (34%), Gaps = 41/397 (10%)
Query: 125 LDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHL 184
++ + L+ NS + T+ S +L I N L L + N
Sbjct: 32 VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF 91
Query: 185 TGQLPASI-GNLSVLKVINVEENRLSGRI--PNTLGQLRNSFYLNIAGNQFSGNVPPSIY 241
QL L+ L+V+ + + L G + N L + L + N + P+ +
Sbjct: 92 L-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK-KIQPASF 149
Query: 242 --NLSSLELLYLRGNRLIGSLPIDI--GLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM 297
N+ +L L N+ + S+ + T ++
Sbjct: 150 FLNMRRFHVLDLTFNK-VKSICEEDLLNFQGKHFTLLRLSSITL---------------- 192
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLT-------NCSKLI 350
D+N + N + +++ L L+GN A T + S +
Sbjct: 193 QDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNM 252
Query: 351 ALGLYGNRFGGVLPHSIANLSTTTVQI-NMGRNQISGTIPSGI-GNLVNLNGFGIDLNQL 408
F + L + V+ ++ +++I + + + +L + N++
Sbjct: 253 GSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEI 311
Query: 409 TGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNC 467
I LT+L L L N L NL L L+L N+++ S
Sbjct: 312 N-KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370
Query: 468 RSLLSLNVSQNKLTGALPKQIF-NITTLSLYLDLSNN 503
+L L + N+L ++P IF +T+L + L N
Sbjct: 371 PNLKELALDTNQLK-SVPDGIFDRLTSLQ-KIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-24
Identities = 75/369 (20%), Positives = 134/369 (36%), Gaps = 43/369 (11%)
Query: 285 IPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLT 344
+P ++ + + DL+LN + +FSRLQ+L +L + G N+
Sbjct: 25 VPELPAHVNYV---DLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNT-----FR 76
Query: 345 NCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQI-SGTIPSGI-GNLVNLNGFG 402
S LI L L N+F + + L+ + + + + + L +L
Sbjct: 77 GLSSLIILKLDYNQFLQLETGAFNGLANLE-VLTLTQCNLDGAVLSGNFFKPLTSLEMLV 135
Query: 403 IDLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTL--LTELELQSNYLQ-- 457
+ N + P + +L L FN ++ L N T L L S LQ
Sbjct: 136 LRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDM 195
Query: 458 ------GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLS-NNFLNDSLP 510
+ S+ +L++S N ++ K+ F+ + L +N N
Sbjct: 196 NEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS 255
Query: 511 LEVGNLQNLV-------------ELDISRNQVSGEIPATL-SACTSLEYLNLSYNSFRGG 556
N ++ D+S++++ + ++ S T LE L L+ N
Sbjct: 256 FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEINKI 314
Query: 557 IPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR 616
+ L + L+LS N L + ENL LE L++S NH + F
Sbjct: 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-LG-DQSFLGLPN 372
Query: 617 ---ISLSGN 622
++L N
Sbjct: 373 LKELALDTN 381
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 2e-19
Identities = 56/291 (19%), Positives = 103/291 (35%), Gaps = 37/291 (12%)
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQ 423
H + L +++ N I+ + L +L ++ I + L++L
Sbjct: 23 HQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI 82
Query: 424 LLYLDFNLLEGSIPFS-LGNLTLLTELELQSNYLQGNI--PSSLGNCRSLLSLNVSQNKL 480
+L LD+N + L L L L L G + + SL L + N +
Sbjct: 83 ILKLDYNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141
Query: 481 TGALPKQIF-NITTLSLYLDLSNN---------FLN-DSLPLEVGNLQNLVELDISRNQV 529
P F N+ LDL+ N LN + L ++ D++ +
Sbjct: 142 KKIQPASFFLNMRRFH-VLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWL 200
Query: 530 SGEIPATLSACTSLEYLNLSYNSFRG---GIPLSLSSLKSVKVLDLSSNN-----LSGQI 581
E TS+ L+LS N F+ + ++ L LS++
Sbjct: 201 GWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTN 260
Query: 582 PKYLENLSF-------LEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
K +N +F ++ ++S + + K VFS+ T ++L+ N
Sbjct: 261 FKDPDNFTFKGLEASGVKTCDLSKSKIF-ALL-KSVFSHFTDLEQLTLAQN 309
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 1e-32
Identities = 70/313 (22%), Positives = 117/313 (37%), Gaps = 16/313 (5%)
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
+ +LDL N F+ +L L L N + + N L L
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFN------NLFNLRTL 85
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGT 411
GL NR + LS T ++++ N+I + + +L NL + N L
Sbjct: 86 GLRSNRLKLIPLGVFTGLSNLT-KLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLV-Y 142
Query: 412 IPHEI-GKLTNLQLLYLDFNLLEGSIPF-SLGNLTLLTELELQSNYLQGNIPSSLGNCRS 469
I H L +L+ L L+ L SIP +L +L L L L+ + S
Sbjct: 143 ISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201
Query: 470 LLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQ 528
L L +S + L+ L +++ L ++P +L L L++S N
Sbjct: 202 LKVLEISHWPYLDTMTPNCLYGLNLT-SLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNP 259
Query: 529 VSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENL 588
+S + L L+ + L P + L ++VL++S N L+ ++
Sbjct: 260 ISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSV 319
Query: 589 SFLEYLNISSNHF 601
LE L + SN
Sbjct: 320 GNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 7e-31
Identities = 72/333 (21%), Positives = 125/333 (37%), Gaps = 18/333 (5%)
Query: 249 LYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGK 308
+ R + ++P I + + +N + F++ +L L+LN N+ S
Sbjct: 16 VLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAV 71
Query: 309 VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIA 368
P F+ L NL L L N L S L L + N+ +L +
Sbjct: 72 EPGAFNNLFNLRTLGLRSNRLKLIPLGVFT------GLSNLTKLDISENKIVILLDYMFQ 125
Query: 369 NLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLY 426
+L + +G N + I L +L ++ LT +IP E L L +L
Sbjct: 126 DLYNLKS-LEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLR 182
Query: 427 LDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPK 486
L + +S L L LE+ + + +L SL+++ LT A+P
Sbjct: 183 LRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPY 241
Query: 487 QIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEY 545
+L+LS N + ++ + L L E+ + Q++ P L
Sbjct: 242 LAVRHLVYLRFLNLSYNPI-STIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 300
Query: 546 LNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLS 578
LN+S N S+ +++ L L SN L+
Sbjct: 301 LNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-28
Identities = 70/321 (21%), Positives = 116/321 (36%), Gaps = 23/321 (7%)
Query: 309 VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIA 368
VP L L N + ++ + L L L N V P +
Sbjct: 26 VPEGIPT--ETRLLDLGKNRIKTLNQDEF------ASFPHLEELELNENIVSAVEPGAFN 77
Query: 369 NLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLY 426
NL + + N++ IP G+ L NL I N++ + + L NL+ L
Sbjct: 78 NLFNLRT-LGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLE 134
Query: 427 LDFNLLEGSIPF-SLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALP 485
+ N L I + L L +L L+ L +L + L+ L + + A+
Sbjct: 135 VGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-AIR 192
Query: 486 KQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA-TLSACTSLE 544
F L++S+ D++ NL L I+ ++ +P + L
Sbjct: 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLR 251
Query: 545 YLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGK 604
+LNLSYN L L ++ + L L+ P L++L LN+S N
Sbjct: 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-T 310
Query: 605 VPTKGVFS---NKTRISLSGN 622
+ + VF N + L N
Sbjct: 311 LE-ESVFHSVGNLETLILDSN 330
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-24
Identities = 65/323 (20%), Positives = 124/323 (38%), Gaps = 19/323 (5%)
Query: 139 IPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVL 198
+P + + N + + + ++ LE+L + +N ++ P + NL L
Sbjct: 26 VPEGIP--TETRLLDLGKNRI-KTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82
Query: 199 KVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI-YNLSSLELLYLRGNRLI 257
+ + + NRL L N L+I+ N+ + + +L +L+ L + N +
Sbjct: 83 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDND-L 140
Query: 258 GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQ 317
+ L L + + N + + S+ L++L L + +F RL
Sbjct: 141 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 200
Query: 318 NLSWLLLAGNNLGNGAANDLDFITP-LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQ 376
L L ++ LD +TP L +L + V ++ +L
Sbjct: 201 RLKVLEISHWPY-------LDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR-F 252
Query: 377 INMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGS 435
+N+ N IS TI + L+ L + QL P+ L L++L + N L +
Sbjct: 253 LNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT-T 310
Query: 436 IPFSL-GNLTLLTELELQSNYLQ 457
+ S+ ++ L L L SN L
Sbjct: 311 LEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-23
Identities = 59/336 (17%), Positives = 107/336 (31%), Gaps = 24/336 (7%)
Query: 63 CQWTG--VTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNF 111
C V C + L L I + + L ++L +N
Sbjct: 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV 68
Query: 112 YGNIPHEV-GRLSRLDTLMLANNSFSGKIPTN-LSGCSNLINFLAHGNNLVGQIAANIGY 169
+ L L TL L +N IP +G SNL N +V + +
Sbjct: 69 -SAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQ 125
Query: 170 NWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAG 229
+ L+ L + DN L + L+ L+ + +E+ L+ L L L +
Sbjct: 126 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185
Query: 230 NQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSF 289
+ S L L++L + + ++ + L LT+ I N + +
Sbjct: 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC-LYGLNLTSLSITHCNLTAVPYLAV 244
Query: 290 SNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKL 349
+ L L+L+ N S L L + L G L + L
Sbjct: 245 RHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPY------AFRGLNYL 298
Query: 350 IALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQIS 385
L + GN+ + ++ + + N ++
Sbjct: 299 RVLNVSGNQLTTLEESVFHSVGNLET-LILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 9e-23
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 16/243 (6%)
Query: 387 TIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTL 445
+P GI L+ + N++ E +L+ L L+ N++ P + NL
Sbjct: 25 AVPEGIPTETRLLD---LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81
Query: 446 LTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF-NITTLSLYLDLSNNF 504
L L L+SN L+ +L L++S+NK+ L +F ++ L L++ +N
Sbjct: 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNL-KSLEVGDND 139
Query: 505 LNDSLPLEV-GNLQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLS 562
L + L +L +L + + ++ IP LS L L L + + S
Sbjct: 140 LV-YISHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFK 197
Query: 563 SLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISL 619
L +KVL++S + L L+I+ + VP + ++L
Sbjct: 198 RLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPY-LAVRHLVYLRFLNL 255
Query: 620 SGN 622
S N
Sbjct: 256 SYN 258
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 66/214 (30%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 712 IGQGSFGFVYRGIL----GEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G FG V G +VAVK L + E + LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
C + + LV EY+ GSL ++L + + L Q L A I +
Sbjct: 99 KGCCEDAGAASL---QLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 148
Query: 827 YLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YLH H IH DL NVLLD+D + +GDFGLAK + + E
Sbjct: 149 YLHAQHY----IHRDLAARNVLLDNDRLVKIGDFGLAKAVP----EGHEYYRVREDGDSP 200
Query: 886 VGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
V + APE AS DV+SFG+ L E+
Sbjct: 201 VFWYAPECLKEYKFYYAS---DVWSFGVTLYELL 231
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 31/232 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIR 759
E ++G G FG V++G+ + V +KV+ + + +F++ A+ ++
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
H ++++++ +C LV +Y+ GSL + + L L+ +
Sbjct: 74 HAHIVRLLGLCPG------SSLQLVTQYLPLGSLLDHVRQHRGA-----LGPQLLLNWGV 122
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
IA + YL H ++H +L NVLL V DFG+A L DD + S
Sbjct: 123 QIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP---DDKQLLYS- 175
Query: 880 IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
K + ++A E +G + S DV+S+G+ + E+ P +
Sbjct: 176 -EAKTPIKWMALESIHFGKYTHQS---DVWSYGVTVWELMTFGAEPYAGLRL 223
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-32
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK-SFVAECEALRNIRHRNLIK---- 765
+G+G FG V+ A+K + L + + + E +AL + H +++
Sbjct: 12 CLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 766 IITICSSIDSHGVDFKALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+ ++ K +Y + + +L++W+ N + + + LHI + IA
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCLHIFLQIA 128
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----YTCQVDDVETPS 877
A+E+LH ++H DLKPSN+ D V VGDFGL + + + +
Sbjct: 129 EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
G GT Y++PE G+ S D++S G++L E+
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 712 IGQGSFGFVYRGIL--GEGGLLVAVKVL--NLTRKGAFKSFVAECEALRNIRHRNLIKII 767
+G G+FG V +G + VAVK+L +AE ++ + + ++++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
IC + + LV E + G L ++L + + + + ++ ++Y
Sbjct: 85 GICEA------ESWMLVMEMAELGPLNKYLQQNRH------VKDKNIIELVHQVSMGMKY 132
Query: 828 L-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG---IK 883
L + +H DL NVLL A + DFGL+K L D+ + + G +K
Sbjct: 133 LEESNF----VHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVK 185
Query: 884 GTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
APE Y S S DV+SFG+L+ E F ++P M
Sbjct: 186 WY----APECINYYKFSSKS---DVWSFGVLMWEAFSYGQKPYRGMKG 226
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 712 IGQGSFGFVYRGIL--GEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G+FG V +G+ + + VA+KVL T K + + E + + + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+C + + LV E G L ++L ++ + + + ++ ++YL
Sbjct: 78 VCQA------EALMLVMEMAGGGPLHKFLVGKREE-----IPVSNVAELLHQVSMGMKYL 126
Query: 829 -HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG---IKG 884
+ +H DL NVLL + A + DFGL+K L DD + S G +K
Sbjct: 127 EEKNF----VHRDLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYTARSAGKWPLKW 179
Query: 885 TVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
APE + S S DV+S+G+ + E ++P M
Sbjct: 180 Y----APECINFRKFSSRS---DVWSYGVTMWEALSYGQKPYKKMKG 219
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 45/231 (19%)
Query: 712 IGQGSFGFVYRGIL---GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKII 767
IG+G FG V++GI L VA+K T + F+ E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 768 TICSS----IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+ + I + E G L +L L L + A ++
Sbjct: 83 GVITENPVWI----------IMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLST 127
Query: 824 AIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--I 880
A+ YL +H D+ NVL+ + +GDFGL++++ D +S +
Sbjct: 128 ALAYLESKRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYME----DSTYYKASKGKL 179
Query: 881 GIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
IK APE + + AS DV+ FG+ + E+ + +P + N
Sbjct: 180 PIKWM----APESINFRRFTSAS---DVWMFGVCMWEILMHGVKPFQGVKN 223
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-32
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIR 759
EF ++G G+FG VY+G+ + + VA+K L T A K + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ ++ +++ IC + L+ + M G L +++ D + L+ +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDN-----IGSQYLLNWCV 124
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
IA + YL ++H DL NVL+ + DFGLAK L ++ E +
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEYHAE- 177
Query: 880 IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
G K + ++A E + + + S DV+S+G+ + E+ +P D +
Sbjct: 178 -GGKVPIKWMALESILHRIYTHQS---DVWSYGVTVWELMTFGSKPYDGIPA 225
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHRNLIKIITI 769
+G G FG V G G VA+K++ ++G+ F+ E + + N+ H L+++ +
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL- 828
C+ ++ EYM NG L +L + Q L + D+ A+EYL
Sbjct: 88 CTKQRPI-----FIITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYLE 137
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKGTV 886
+H DL N L++ V V DFGL++++ DD T S ++ +
Sbjct: 138 SKQF----LHRDLAARNCLVNDQGVVKVSDFGLSRYVL----DDEYTSSVGSKFPVRWS- 188
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
PE Y S S D+++FG+L+ E++
Sbjct: 189 ---PPEVLMYSKFSSKS---DIWAFGVLMWEIY 215
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-32
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHRNLIKIITI 769
IG G FG V+ G VA+K + R+GA + F+ E E + + H L+++ +
Sbjct: 16 IGSGQFGLVHLGYW-LNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL- 828
C LV E+M++G L ++L + L + +D+ + YL
Sbjct: 72 CLEQAPI-----CLVTEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAYLE 121
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKGTV 886
IH DL N L+ + V V DFG+ +F+ DD T S+ +K
Sbjct: 122 EACV----IHRDLAARNCLVGENQVIKVSDFGMTRFVL----DDQYTSSTGTKFPVKWA- 172
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
+PE + S S DV+SFG+L+ E+F K P ++ N
Sbjct: 173 ---SPEVFSFSRYSSKS---DVWSFGVLMWEVFSEGKIPYENRSN 211
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 4e-32
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 45/217 (20%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRNIRHRNLIKIITI 769
+G G FG V+ G G VAVK L ++G+ +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 770 CSS----IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ I + EYM+NGSL ++L + L++ + L +A IA +
Sbjct: 77 VTQEPIYI----------ITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEGM 122
Query: 826 EYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGI 882
++ + IH DL+ +N+L+ + + DFGLA+ + D+ T I
Sbjct: 123 AFIEERNY----IHRDLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPI 174
Query: 883 KGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
K T APE YG + S DV+SFGILL E+
Sbjct: 175 KWT----APEAINYGTFTIKS---DVWSFGILLTEIV 204
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 4e-32
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHRNLIKIITI 769
+G G FG V G +G VAVK++ ++G+ F E + + + H L+K +
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL- 828
CS +V EY+ NG L +L S+ + L Q L + D+ + +L
Sbjct: 72 CSKEYP-----IYIVTEYISNGCLLNYLR-SHGKG----LEPSQLLEMCYDVCEGMAFLE 121
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKGTV 886
H IH DL N L+D D+ V DFG+ +++ DD S +K +
Sbjct: 122 SHQF----IHRDLAARNCLVDRDLCVKVSDFGMTRYVL----DDQYVSSVGTKFPVKWS- 172
Query: 887 GYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE Y S S DV++FGIL+ E+F
Sbjct: 173 ---APEVFHYFKYSSKS---DVWAFGILMWEVF 199
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-32
Identities = 72/428 (16%), Positives = 126/428 (29%), Gaps = 74/428 (17%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
A + S L+ L ++ + ++ + + +L L N +
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MTG-IEKLTGLTKLICTSNNIT 77
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
+ S ++L L N+L +L + L KLT N + S
Sbjct: 78 -TLDLS--QNTNLTYLACDSNKL-TNLDVT---PLTKLTYLNCDTNKLT---KLDVSQNP 127
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
L L+ N + I+ S L+ L N +T ++L L
Sbjct: 128 LLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKIT--------KLDVTPQTQLTTLD 176
Query: 354 LYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIP 413
N+ I L + LN D N +T +
Sbjct: 177 CSFNK--------ITELD--------------------VSQNKLLNRLNCDTNNIT-KLD 207
Query: 414 HEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473
+ + L L N L I + LT LT + N L + S L +L
Sbjct: 208 --LNQNIQLTFLDCSSNKLT-EIDVT--PLTQLTYFDCSVNPLT-ELDVS--TLSKLTTL 259
Query: 474 NVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI 533
+ Q L ++T + + L+V + L LD ++ E+
Sbjct: 260 HCIQTDLL------EIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-EL 312
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY 593
LS L YL L+ L +S +K L + ++ + + L
Sbjct: 313 D--LSQNPKLVYLYLNNTELTE---LDVSHNTKLKSLSCVNAHIQ-DFSS-VGKIPALNN 365
Query: 594 LNISSNHF 601
+
Sbjct: 366 NFEAEGQT 373
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-27
Identities = 82/464 (17%), Positives = 148/464 (31%), Gaps = 58/464 (12%)
Query: 125 LDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHL 184
+ + A + + L + H +++ I L KL N++
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSI--TDMTGIEKL-TGLTKLICTSNNI 76
Query: 185 TGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLS 244
T L + + L + + N+L+ L +L YLN N+ + + S
Sbjct: 77 T-TLD--LSQNTNLTYLACDSNKLTNLDVTPLTKLT---YLNCDTNKLT-KLDVS--QNP 127
Query: 245 SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNL 304
L L N L + + +LT N + + + L LD + N
Sbjct: 128 LLTYLNCARNTLT-EIDVS---HNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNK 181
Query: 305 FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLP 364
+ ++ S+ + L+ L NN+ LD +L L N+ +
Sbjct: 182 ITE---LDVSQNKLLNRLNCDTNNI-----TKLDL----NQNIQLTFLDCSSNKLTEIDV 229
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQL 424
+ L+ + N ++ S + L L+ L EI N QL
Sbjct: 230 TPLTQLTY----FDCSVNPLTELDVSTLSKLTTLH---CIQTDLL-----EIDLTHNTQL 277
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
+Y + + T L L+ Q+ + + L L+ L ++ +LT L
Sbjct: 278 IYFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTELT-EL 333
Query: 485 PKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSA----- 539
+ + T L L N + D VG + L + Q TL+
Sbjct: 334 D--VSHNTKLK-SLSCVNAHIQD-FS-SVGKIPALNNNFEAEGQTITMPKETLTNNSLTI 388
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
S + L+ N I + ++ NLS P
Sbjct: 389 AVSPDLLDQFGNPM--NIEPGDGGVYDQATNTITWENLSTDNPA 430
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-25
Identities = 70/354 (19%), Positives = 118/354 (33%), Gaps = 62/354 (17%)
Query: 269 PKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN------------------LNLFSGKVP 310
+ V A S + L LD + L S +
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNIT 77
Query: 311 -INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIAN 369
++ S+ NL++L N L N +T +KL L N+ +
Sbjct: 78 TLDLSQNTNLTYLACDSNKLTN---------LDVTPLTKLTYLNCDTNKLTKLDVSQNPL 128
Query: 370 LSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDF 429
L+ +N RN ++ I + + L LN+ + + T L L F
Sbjct: 129 LTY----LNCARNTLT-EID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSF 179
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
N + + LL L +N + + L L L+ S NKLT
Sbjct: 180 NKITE---LDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFLDCSSNKLTE------I 227
Query: 490 NITTLSL--YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLN 547
++T L+ Y D S N L + L+V L L L + + EI L+ T L Y
Sbjct: 228 DVTPLTQLTYFDCSVNPLTE---LDVSTLSKLTTLHCIQTDLL-EID--LTHNTQLIYFQ 281
Query: 548 LSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHF 601
L ++ + +LD + ++ ++ L L YL +++
Sbjct: 282 AEGCRKI--KELDVTHNTQLYLLDCQAAGIT-ELD--LSQNPKLVYLYLNNTEL 330
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 4e-20
Identities = 60/419 (14%), Positives = 126/419 (30%), Gaps = 51/419 (12%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
TKL + +I + + + L + N N+ V L++L L N +
Sbjct: 67 TKLICTSNNITTL---DLSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKLT- 119
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
++S L N L ++ +N +L +L N +L + +
Sbjct: 120 --KLDVSQNPLLTYLNCARNTLT---EIDVSHN-TQLTELDCHLNKKITKLD--VTPQTQ 171
Query: 198 LKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLI 257
L ++ N+++ + Q + LN N + + L L N+L
Sbjct: 172 LTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLT 225
Query: 258 GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQ 317
+ + L +LT F + N + ++ S L L I+ +
Sbjct: 226 -EIDVT---PLTQLTYFDCSVNPLTELDVSTLSK---LTTLHCIQTDLLE---IDLTHNT 275
Query: 318 NLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQI 377
L + G +T+ ++L L + L +
Sbjct: 276 QLIYFQAEGCRKIK--------ELDVTHNTQLYLLDCQAAGITELDLSQNPKLVY----L 323
Query: 378 NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP 437
+ +++ + + + L + +GK+ L +
Sbjct: 324 YLNNTELT-ELD--VSHNTKLKSLSCVNAHIQ-DFS-SVGKIPALNNNFEAEGQTITMPK 378
Query: 438 FSLGNLTLLTELELQSNYLQGN---IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITT 493
+L N +L + GN I G + ++ L+ P + T+
Sbjct: 379 ETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTS 437
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 5e-15
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 17/182 (9%)
Query: 421 NLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKL 480
N ++ + S L LT L+ ++ + ++ + L L + N +
Sbjct: 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSNNI 76
Query: 481 TGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSAC 540
T L + T L+ YL +N L + L+V L L L+ N+++ ++ +S
Sbjct: 77 T-TLD--LSQNTNLT-YLACDSNKLTN---LDVTPLTKLTYLNCDTNKLT-KLD--VSQN 126
Query: 541 TSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNH 600
L YLN + N+ + +S + LD N ++ + + L L+ S N
Sbjct: 127 PLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNK 181
Query: 601 FE 602
Sbjct: 182 IT 183
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 4e-32
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 712 IGQGSFGFVYRGIL---GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G FG VY G+ + VAVK + F++E ++N+ H +++K+I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
I + ++ E G L +L + + L ++ + ++ I A+ Y
Sbjct: 80 GIIEE------EPTWIIMELYPYGELGHYLERNKNS-----LKVLTLVLYSLQICKAMAY 128
Query: 828 L-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKG 884
L +C +H D+ N+L+ +GDFGL++++ D+ +S + IK
Sbjct: 129 LESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIE----DEDYYKASVTRLPIKW 180
Query: 885 TVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+PE + + AS DV+ F + + E+
Sbjct: 181 M----SPESINFRRFTTAS---DVWMFAVCMWEIL 208
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 5e-32
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 684 TSPMEQQFPIVSYAELSKATGEFSTS-----NMIGQGSFGFVYRGILGEGGLLVAVKVLN 738
P + + + E ++ + IG+G FG V G G VAVK +
Sbjct: 168 IKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI- 224
Query: 739 LTRKGAF-KSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL 797
+ A ++F+AE + +RH NL++++ + +V EYM GSL ++L
Sbjct: 225 --KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYL 278
Query: 798 HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857
L L ++D+ A+EYL + +H DL NVL+ D VA V
Sbjct: 279 RSRGRSV----LGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVS 331
Query: 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLE 914
DFGL K + Q + +K T APE S S DV+SFGILL E
Sbjct: 332 DFGLTKEASSTQDT------GKLPVKWT----APEALREKKFSTKS---DVWSFGILLWE 378
Query: 915 MF 916
++
Sbjct: 379 IY 380
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 7e-32
Identities = 67/210 (31%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKIITIC 770
IG+G FG V G G VAVK + + A ++F+AE + +RH NL++++ +
Sbjct: 29 IGKGEFGDVMLGDYR--GNKVAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL-H 829
+V EYM GSL ++L L L ++D+ A+EYL
Sbjct: 84 V----EEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEG 135
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
++ +H DL NVL+ D VA V DFGL K + Q + +K T
Sbjct: 136 NNF----VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT------GKLPVKWT---- 181
Query: 890 APE---YGMGSEASMAGDVYSFGILLLEMF 916
APE S S DV+SFGILL E++
Sbjct: 182 APEALREKKFSTKS---DVWSFGILLWEIY 208
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 7e-32
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+GQGSFG VY G+ E VA+K +N F+ E ++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL----HHSNDQHDVCDLSLIQRLHIAIDI 821
++ + S V + E M G L+ +L + + SL + + +A +I
Sbjct: 93 LLGVVSQGQPTLV-----IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 822 AYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS- 879
A + YL+ + +H DL N ++ D +GDFG+ + +Y D
Sbjct: 148 ADGMAYLNANKF----VHRDLAARNCMVAEDFTVKIGDFGMTRDIYE---TDYYRKGGKG 200
Query: 880 -IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ ++ +PE G+ + S DV+SFG++L E+
Sbjct: 201 LLPVRWM----SPESLKDGVFTTYS---DVWSFGVVLWEIA 234
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 127 bits (319), Expect = 9e-32
Identities = 36/307 (11%), Positives = 77/307 (25%), Gaps = 45/307 (14%)
Query: 671 YARRRRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGL 730
+ + ++ + Q + LS+ + + G V+ E
Sbjct: 29 ALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLE 88
Query: 731 LVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLI---------------------KI 766
A+KV + + A + +
Sbjct: 89 DFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPF 148
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDV-CDLSLIQRLHIAIDIAYAI 825
+ D + V L+ LE + + D ++ + +
Sbjct: 149 AQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLA 207
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
L ++HG P N+ + D +GD + +
Sbjct: 208 ANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSAL----------WKVGTRGPASSVP 254
Query: 886 VGYVAPEYGMGSEASM--AGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943
V Y E+ S A+ A + + G+ + ++ P F + + K R
Sbjct: 255 VTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP----FGLVTPGIKGSWKRPSLR 310
Query: 944 VIEIVDP 950
V
Sbjct: 311 VPGTDSL 317
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-31
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 37/238 (15%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR 759
+ +F ++GQG+FG V + A+K + T + + ++E L ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLN 60
Query: 760 HRNLIKII-----TICSSIDSHGVDFKALVY---EYMQNGSLEEWLHHSNDQHDVCDLSL 811
H+ +++ V K+ ++ EY +NG+L + +H N +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-----LNQQR 115
Query: 812 IQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
+ + I A+ Y+H IIH DLKP N+ +D +GDFGLAK ++
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 872 DVETPSSSIGIK-------GTVGYVAPE-------YGMGSEASMAGDVYSFGILLLEM 915
+ G GT YVA E Y E D+YS GI+ EM
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN---EKI---DMYSLGIIFFEM 224
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 131 bits (330), Expect = 1e-31
Identities = 49/245 (20%), Positives = 93/245 (37%), Gaps = 31/245 (12%)
Query: 711 MIGQGSFGFVYRGI-LGEGGLLVAVKVLNLTRKGAFKS-FVAECEALRNIRHRNLIKIIT 768
I G G++Y + G V +K L + ++ +AE + L + H ++++I
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
D HG +V EY+ SL+ L + + + ++I A+ YL
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--------LPVAEAIAYLLEILPALSYL 198
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H +++ DLKP N++L + + + D G + + GT G+
Sbjct: 199 HSI---GLVYNDLKPENIMLTEEQLK-LIDLGAVSRI---------NSFGYLY--GTPGF 243
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948
APE ++A D+Y+ G L + + +G + + +
Sbjct: 244 QAPEIVRT-GPTVATDIYTVGRTLAALTLDLPT----R-NGRYVDGLPEDDPVLKTYDSY 297
Query: 949 DPLLL 953
LL
Sbjct: 298 GRLLR 302
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-31
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G FG V+ VAVK + ++F+AE ++ ++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ ++ E+M GSL ++L L + + + IA + ++
Sbjct: 254 K------EPIYIITEFMAKGSLLDFLKSDEGSK----QPLPKLIDFSAQIAEGMAFIEQR 303
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
IH DL+ +N+L+ +V + DFGLA+ + D+ T G K + + AP
Sbjct: 304 N---YIHRDLRAANILVSASLVCKIADFGLARVIE----DNEYTARE--GAKFPIKWTAP 354
Query: 892 E---YGMGSEASMAGDVYSFGILLLEMF 916
E +G + S DV+SFGILL+E+
Sbjct: 355 EAINFGSFTIKS---DVWSFGILLMEIV 379
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-31
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+G G+FG VY G + L VAVK L + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL-HHSNDQHDVCDLSLIQRLHIAIDIAYA 824
I + + + E M G L+ +L L+++ LH+A DIA
Sbjct: 98 CIGVSLQSLPRFI-----LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 825 IEYL-HHHCQPPIIHGDLKPSNVLLD---HDMVAHVGDFGLAKFLYTCQVDDVETPSSS- 879
+YL +H IH D+ N LL VA +GDFG+A+ +Y
Sbjct: 153 CQYLEENHF----IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---ASYYRKGGCA 205
Query: 880 -IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ +K PE G+ + + D +SFG+LL E+F
Sbjct: 206 MLPVKWM----PPEAFMEGIFTSKT---DTWSFGVLLWEIF 239
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-31
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 39/225 (17%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G+FG V+ + +LVAVK L + A + F E E L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWL---------HHSNDQHDVCDLSLIQRLHI 817
+C+ +V+EYM++G L +L + L L Q L +
Sbjct: 109 FGVCTEGRPL-----LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 818 AIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
A +A + YL H +H DL N L+ +V +GDFG+++ +Y+ D
Sbjct: 164 ASQVAAGMVYLAGLHF----VHRDLATRNCLVGQGLVVKIGDFGMSRDIYS---TDYYRV 216
Query: 877 SSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ I+ PE Y + S DV+SFG++L E+F
Sbjct: 217 GGRTMLPIRWM----PPESILYRKFTTES---DVWSFGVVLWEIF 254
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 30/233 (12%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR 759
+ +F +IG G FG V++ G +K + + A + E +AL +
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLD 62
Query: 760 HRNLIK--------IITICSSIDSHGVDFKALVY---EYMQNGSLEEWLHHSNDQHDVCD 808
H N++ +S + ++ E+ G+LE+W+ +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK---- 118
Query: 809 LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
L + L + I ++Y+H +I+ DLKPSN+ L +GDFGL L
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSL--- 172
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ KGT+ Y++PE + D+Y+ G++L E+
Sbjct: 173 -----KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT 220
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-30
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKI 766
+G+G+FG V+ + +LVAVK L A K F E E L N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLIQRLH 816
+C D +V+EYM++G L ++L + +L L Q LH
Sbjct: 83 YGVCGDGDPL-----IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 817 IAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
IA IA + YL H +H DL N L+ +++ +GDFG+++ +Y+ V
Sbjct: 138 IASQIASGMVYLASQHF----VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 876 PSSSIGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ + I+ PE Y + S DV+SFG++L E+F
Sbjct: 194 -HTMLPIRWM----PPESIMYRKFTTES---DVWSFGVILWEIF 229
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-30
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+GQG FG V+ G G VA+K L ++F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ +V EYM GSL ++L ++ L L Q + +A IA + Y+
Sbjct: 250 E------EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
+H DL+ +N+L+ ++V V DFGLA+ + D+ T G K + + AP
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQ--GAKFPIKWTAP 350
Query: 892 EYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
E + ++ DV+SFGILL E+ + + P M N
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-30
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+G G+FG VY G + L VAVK L + + F+ E + H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL-HHSNDQHDVCDLSLIQRLHIAIDIAYA 824
I + + + E M G L+ +L L+++ LH+A DIA
Sbjct: 139 CIGVSLQSLPRFI-----LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 825 IEYL-HHHCQPPIIHGDLKPSNVLLD---HDMVAHVGDFGLAKFLYTCQVDDVETPSSS- 879
+YL +H IH D+ N LL VA +GDFG+A+ +Y
Sbjct: 194 CQYLEENHF----IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---AGYYRKGGCA 246
Query: 880 -IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ +K PE G+ + + D +SFG+LL E+F
Sbjct: 247 MLPVKWM----PPEAFMEGIFTSKT---DTWSFGVLLWEIF 280
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 19/230 (8%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+G F +V G A+K + + + E + R H N+++++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA--Y 94
Query: 772 SIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+ G +A L+ + + G+L + D+ + L+ Q L + + I +E +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQILWLLLGICRGLEAIH- 151
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL--YTCQVDDVETPSSSIGIKGTVGY 888
H DLKP+N+LL + + D G + T + T+ Y
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 889 VAPE------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932
APE + + E + DV+S G +L M + P D +F G ++
Sbjct: 210 RAPELFSVQSHCVIDERT---DVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-30
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
+G+ FG VY+G L GE VA+K L + F E ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLIQRL 815
++ + + ++++ Y +G L E+L +D+ L +
Sbjct: 77 LLGVVTKDQPL-----SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 816 HIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
H+ IA +EYL HH +H DL NVL+ + + D GL + +Y D
Sbjct: 132 HLVAQIAAGMEYLSSHHV----VHKDLATRNVLVYDKLNVKISDLGLFREVYA---ADYY 184
Query: 875 TPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ + I+ APE YG S S D++S+G++L E+F
Sbjct: 185 KLLGNSLLPIRWM----APEAIMYGKFSIDS---DIWSYGVVLWEVF 224
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 5e-30
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+GQG FG V+ G G VA+K L ++F+ E + ++ +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ +V EYM GSL ++L ++ L L Q + +A IA + Y+
Sbjct: 333 E------EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 382
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
+H DL+ +N+L+ ++V V DFGLA+ + D+ T G K + + AP
Sbjct: 383 N---YVHRDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQ--GAKFPIKWTAP 433
Query: 892 EYGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
E + ++ DV+SFGILL E+ + + P M N
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 470
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 7e-30
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 712 IGQGSFGFVYRGIL--GEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G+FG V +G+ + + VA+KVL T K + + E + + + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+C + + LV E G L ++L ++ + + + ++ ++YL
Sbjct: 404 VCQA------EALMLVMEMAGGGPLHKFLVGKREE-----IPVSNVAELLHQVSMGMKYL 452
Query: 829 -HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG---IKG 884
+ +H +L NVLL + A + DFGL+K L DD + S G +K
Sbjct: 453 EEKNF----VHRNLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYTARSAGKWPLKW 505
Query: 885 TVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIR-KRPTDSMFN 927
APE + S S DV+S+G+ + E ++P M
Sbjct: 506 Y----APECINFRKFSSRS---DVWSYGVTMWEALSYGQKPYKKMKG 545
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 48/225 (21%)
Query: 712 IGQGSFGFVYRGIL-------GEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+GQG+F +++G+ V +KVL+ + +SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+C D + LV E+++ GSL+ +L + + ++++ +L +A +A A
Sbjct: 76 LNYGVCVCGDEN-----ILVQEFVKFGSLDTYLKKNKNC-----INILWKLEVAKQLAAA 125
Query: 825 IEYL-HHHCQPPIIHGDLKPSNVLLDHD--------MVAHVGDFGLAKFLYTCQVDDVET 875
+ +L + IHG++ N+LL + + D G++ +
Sbjct: 126 MHFLEENTL----IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL-------PK 174
Query: 876 PSSSIGIKGTVGYVAPE----YGMGSEASMAGDVYSFGILLLEMF 916
I PE + A+ D +SFG L E+
Sbjct: 175 DILQERIPWV----PPECIENPKNLNLAT---DKWSFGTTLWEIC 212
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-29
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 36/215 (16%)
Query: 712 IGQGSFGFVYRGIL---GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKII 767
IG+G FG V++GI + VA+K T + F+ E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + + ++ E G L +L L L + A ++ A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQVRKFS-----LDLASLILYAYQLSTALAY 506
Query: 828 LH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKG 884
L +H D+ NVL+ + +GDFGL++++ D +S + IK
Sbjct: 507 LESKRF----VHRDIAARNVLVSSNDCVKLGDFGLSRYME----DSTYYKASKGKLPIKW 558
Query: 885 TVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE + + AS DV+ FG+ + E+
Sbjct: 559 M----APESINFRRFTSAS---DVWMFGVCMWEIL 586
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-29
Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 41/228 (17%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNI-RHRNLI 764
+G+G+FG V VAVK+L ++ ++E + L +I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLIQR 814
++ C+ ++ E+ + G+L +L + + L+L
Sbjct: 95 NLLGACTKPGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 815 LHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
+ + +A +E+L C IH DL N+LL V + DFGLA+ +Y D
Sbjct: 151 ICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYK---DPD 203
Query: 874 ETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ +K APE + + S DV+SFG+LL E+F
Sbjct: 204 YVRKGDARLPLKWM----APETIFDRVYTIQS---DVWSFGVLLWEIF 244
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 5e-29
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 712 IGQGSFGFVYRGIL-------GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNI-RHRN 762
+G+G+FG V + + VAVK+L + V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLI 812
+I ++ C+ ++ EY G+L E+L + ++ ++
Sbjct: 103 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 813 QRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
+ +A +EYL C IH DL NVL+ + V + DFGLA+ +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN---I 210
Query: 872 DVETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
D +++ + +K APE + + S DV+SFG+L+ E+F
Sbjct: 211 DYYKKTTNGRLPVKWM----APEALFDRVYTHQS---DVWSFGVLMWEIF 253
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 7e-29
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI 758
S + + S+++GQG+ V+RG + G L A+KV N + E E L+ +
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
H+N++K+ I + K L+ E+ GSL L + + L + L +
Sbjct: 65 NHKNIVKLFAI---EEETTTRHKVLIMEFCPCGSLYTVLE---EPSNAYGLPESEFLIVL 118
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFGLAKFLYTCQVDDVE 874
D+ + +L + I+H ++KP N++ D V + DFG A+ L +D E
Sbjct: 119 RDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-----EDDE 170
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAG--------DVYSFGILLLEM 915
S GT Y+ P+ + D++S G+
Sbjct: 171 QFVSLY---GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 7e-29
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 55/238 (23%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGA----FKSFVAECEALRNIRHRN 762
+G+G FG V + G VAVK+L ++ A + ++E L+ + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML---KENASPSELRDLLSEFNVLKQVNHPH 87
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL------------------HHSNDQH 804
+IK+ CS L+ EY + GSL +L S D
Sbjct: 88 VIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 805 DVCDLSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
D L++ + A I+ ++YL +H DL N+L+ + DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKL----VHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 864 FLYTCQVDDVETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+Y +D S I +K A E + + S DV+SFG+LL E+
Sbjct: 199 DVYE---EDSYVKRSQGRIPVKWM----AIESLFDHIYTTQS---DVWSFGVLLWEIV 246
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 122 bits (306), Expect = 1e-28
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI 758
++ G + +G G FG+V R I + G VA+K + + E + ++ +
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 759 RHRNLIKII-TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
H N++ D L EY + G L ++L N + C L +
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIRTL 126
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD---HDMVAHVGDFGLAKFLYTCQVDDVE 874
DI+ A+ YLH + IIH DLKP N++L ++ + D G AK L D E
Sbjct: 127 LSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-----DQGE 178
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927
+ + GT+ Y+APE + ++ D +SFG L E RP +
Sbjct: 179 LCTEFV---GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 228
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-28
Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 55/238 (23%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLIK 765
IG+G+FG V++ E +VAVK+L F E + + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS------------------NDQHDVC 807
++ +C+ L++EYM G L E+L
Sbjct: 115 LLGVCAVGKPM-----CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 808 DLSLIQRLHIAIDIAYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
LS ++L IA +A + YL +H DL N L+ +MV + DFGL++ +Y
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKF----VHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 867 TCQVDDVETPSSSIGIKGTVGYV-----APE---YGMGSEASMAGDVYSFGILLLEMF 916
+ D + PE Y + S DV+++G++L E+F
Sbjct: 226 S---ADYYK-------ADGNDAIPIRWMPPESIFYNRYTTES---DVWAYGVVLWEIF 270
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-28
Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 54/276 (19%)
Query: 684 TSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG 743
TS P +EL + ++GQ E G V V T +
Sbjct: 53 TSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP 112
Query: 744 A----------------FKSFVAECEALRNIR---------HRNLIKIITICSSIDSHGV 778
+ + +A ++R K+I + V
Sbjct: 113 PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWV 172
Query: 779 DFKALVYEYMQ--NGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPI 836
+ +Y MQ + E L + H L RL + + + + LHH+ +
Sbjct: 173 LSRFFLYPRMQSNLQTFGEVLLSHSSTHK--SLVHHARLQLTLQVIRLLASLHHYG---L 227
Query: 837 IHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEY--- 893
+H L+P +++LD + F + S + G+ PE
Sbjct: 228 VHTYLRPVDIVLDQRGGVFLTGFEHLV-----RDGARVVSS------VSRGFEPPELEAR 276
Query: 894 --------GMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ + + D ++ G+++ ++ P
Sbjct: 277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-28
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGA----FKSFVAECEALRNI-RHR 761
+G G+FG V + L VAVK+L + A ++ ++E + + ++ +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML---KSTAHADEKEALMSELKIMSHLGQHE 110
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL--------HHSNDQHDVCDLSLIQ 813
N++ ++ C+ ++ EY G L +L S
Sbjct: 111 NIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 814 RLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
LH + +A + +L +C IH D+ NVLL + VA +GDFGLA+ + D
Sbjct: 166 LLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN---DS 218
Query: 873 VETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ + +K APE + + S DV+S+GILL E+F
Sbjct: 219 NYIVKGNARLPVKWM----APESIFDCVYTVQS---DVWSYGILLWEIF 260
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 2e-28
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 49/271 (18%)
Query: 676 RFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSN-----MIGQGSFGFVYRGIL----- 725
R + S T+ + Y EF +G+G FG V
Sbjct: 48 RITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDK 107
Query: 726 --GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFK 781
+ + VAVK+L + V+E E ++ I +H+N+I ++ C+
Sbjct: 108 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL----- 162
Query: 782 ALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL-HH 830
++ EY G+L E+L + ++ ++ + +A +EYL
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKGTVGY 888
C IH DL NVL+ + V + DFGLA+ + D +++ + +K
Sbjct: 223 KC----IHRDLAARNVLVTENNVMKIADFGLARDINN---IDYYKKTTNGRLPVKWM--- 272
Query: 889 VAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE + + S DV+SFG+L+ E+F
Sbjct: 273 -APEALFDRVYTHQS---DVWSFGVLMWEIF 299
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 3e-28
Identities = 45/283 (15%), Positives = 79/283 (27%), Gaps = 45/283 (15%)
Query: 673 RRRRFVHKSSVTS--PMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGL 730
S+ S P +EL + ++GQ E G
Sbjct: 45 SEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGE 104
Query: 731 LVAVKVLNLTRK---GAFKSFVAECEALRNIR----------------------HRNLIK 765
V V T + A K E LR +R K
Sbjct: 105 SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKK 164
Query: 766 IITICSSIDSHGVDFKALVYEYMQ--NGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+I + V + +Y MQ + E L + H L RL + + +
Sbjct: 165 MIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK--SLVHHARLQLTLQVIR 222
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ LHH+ ++H L+P +++LD + F + G
Sbjct: 223 LLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLV-----RDGASAVSPIGRGF- 273
Query: 884 GTVGYVAPEYGMGSEA-----SMAGDVYSFGILLLEMFIRKRP 921
A + + A D ++ G+ + ++ P
Sbjct: 274 APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-28
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 712 IGQGSFGFVYRGIL-------GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNI-RHRN 762
+G+G+FG V VAVK+L + ++E E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLI 812
+I ++ C+ ++ EY G+L E+L ++ + LS
Sbjct: 137 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 813 QRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
+ A +A +EYL C IH DL NVL+ D V + DFGLA+ ++
Sbjct: 192 DLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHH---I 244
Query: 872 DVETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
D +++ + +K APE + + S DV+SFG+LL E+F
Sbjct: 245 DYYKKTTNGRLPVKWM----APEALFDRIYTHQS---DVWSFGVLLWEIF 287
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 4e-28
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 44/230 (19%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEALRNI-RHRNLI 764
+G G+FG V + + VAVK+L ++ ++E + L + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWL------------HHSNDQHDVCDLSLI 812
++ C+ ++ EY G L +L + + D L L
Sbjct: 91 NLLGACTIGGPT-----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 813 QRLHIAIDIAYAIEYLH-HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
L + +A + +L +C IH DL N+LL H + + DFGLA+ + D
Sbjct: 146 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN---D 198
Query: 872 DVETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ + +K APE + + S DV+S+GI L E+F
Sbjct: 199 SNYVVKGNARLPVKWM----APESIFNCVYTFES---DVWSYGIFLWELF 241
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 4e-28
Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 28/246 (11%)
Query: 681 SSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT 740
P + P + Y L+ F IG+G F VYR G+ VA+K + +
Sbjct: 13 VPQFQPQKALRPDMGYNTLAN----FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIF 68
Query: 741 RKGAFK---SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL--VYEYMQNGSLEE 795
K + E + L+ + H N+IK S ++ L V E G L
Sbjct: 69 DLMDAKARADCIKEIDLLKQLNHPNVIKYY------ASF-IEDNELNIVLELADAGDLSR 121
Query: 796 WLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH 855
+ H Q + + + + A+E++H ++H D+KP+NV + V
Sbjct: 122 MIKHFKKQKRLIPERTV--WKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVK 176
Query: 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+GD GL +F + + + + GT Y++PE + + D++S G LL EM
Sbjct: 177 LGDLGLGRFF-SSKTTAAHS------LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
Query: 916 FIRKRP 921
+ P
Sbjct: 230 AALQSP 235
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 5e-28
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 16/215 (7%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIIT 768
IG GS+G + G ++ K L+ + + V+E LR ++H N I+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN---IVR 69
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
I +V EY + G L + + D + L + + A++
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLALKEC 127
Query: 829 H--HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
H ++H DLKP+NV LD +GDFGLA+ L +T GT
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKT------FVGTP 180
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
Y++PE + D++S G LL E+ P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-28
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 33/239 (13%)
Query: 695 SYAELSKATGEFSTSNM--------IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGA 744
+ + T +M IG+GSFG E G +K +N++R
Sbjct: 7 HSSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE 66
Query: 745 FKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKAL--VYEYMQNGSLEEWLHHSND 802
+ E L N++H N+++ +S + +L V +Y + G L + ++
Sbjct: 67 REESRREVAVLANMKHPNIVQYR------ESF-EENGSLYIVMDYCEGGDLFKRINAQKG 119
Query: 803 QHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
Q L + I A++++H I+H D+K N+ L D +GDFG+A
Sbjct: 120 VL----FQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Query: 863 KFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ L V+ GT Y++PE + D+++ G +L E+ K
Sbjct: 173 RVL-NSTVELARA------CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA 224
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 50/231 (21%)
Query: 710 NMIGQGSFGFVYRGILGEGGL--LVAVKVLNLTRKGA----FKSFVAECEALRNI-RHRN 762
++IG+G+FG V + + + GL A+K + ++ A + F E E L + H N
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRM---KEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL----------HHSNDQHDVCDLSLI 812
+I ++ C L EY +G+L ++L + LS
Sbjct: 88 IINLLGACEHRGYL-----YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 813 QRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVD 871
Q LH A D+A ++YL IH DL N+L+ + VA + DFGL++
Sbjct: 143 QLLHFAADVARGMDYLSQKQF----IHRDLAARNILVGENYVAKIADFGLSR-------G 191
Query: 872 DVETPSSSIG---IKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
++G ++ A E Y + + S DV+S+G+LL E+
Sbjct: 192 QEVYVKKTMGRLPVRWM----AIESLNYSVYTTNS---DVWSYGVLLWEIV 235
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 55/238 (23%)
Query: 712 IGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRKGA----FKSFVAECEALRNI-RHR 761
+G G+FG V + VAVK+L ++ A ++ ++E + + + H
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKML---KEKADSSEREALMSELKMMTQLGSHE 109
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL-----------------HHSNDQH 804
N++ ++ C+ L++EY G L +L ++
Sbjct: 110 NIVNLLGACTLSGPI-----YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 805 DVCDLSLIQRLHIAIDIAYAIEYL-HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
D+ L+ L A +A +E+L C +H DL NVL+ H V + DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 864 FLYTCQVDDVETPSSS--IGIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
+ + D + + +K APE G+ + S DV+S+GILL E+F
Sbjct: 221 DIMS---DSNYVVRGNARLPVKWM----APESLFEGIYTIKS---DVWSYGILLWEIF 268
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 1e-27
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 27/235 (11%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKII-- 767
++ +G F FVY G A+K L + ++ + E ++ + H N+++
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+S + L+ + G L E+L + LS L I A+++
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP---LSCDTVLKIFYQTCRAVQH 151
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----YTCQVDDVETPSSSIGI 882
+H +PPIIH DLK N+LL + + DFG A + Y+ I
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 883 KGTVGYVAPE-------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGL 930
T Y PE + +G + D+++ G +L + R+ P F DG
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQ----DIWALGCILYLLCFRQHP----FEDGA 257
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-27
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI 758
S + + S+++GQG+ V+RG + G L A+KV N + E E L+ +
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
H+N++K+ I + K L+ E+ GSL L + + L + L +
Sbjct: 65 NHKNIVKLFAI---EEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIVL 118
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFGLAKFLYTCQVDDVE 874
D+ + +L + I+H ++KP N++ D V + DFG A+ L +D E
Sbjct: 119 RDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-----EDDE 170
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAG--------DVYSFGILLLEM 915
S GT Y+ P+ + D++S G+
Sbjct: 171 QFVSLY---GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYL 427
+L T +++ N+I+ NL NL+ + N+++ P L L+ LYL
Sbjct: 48 KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107
Query: 428 DFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT-GALPK 486
N L+ +P + L EL + N + S ++ + + N L +
Sbjct: 108 SKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIEN 164
Query: 487 QIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA-TLSACTSLEY 545
F Y+ +++ + + G +L EL + N+++ ++ A +L +L
Sbjct: 165 GAFQGMKKLSYIRIADTNITT---IPQGLPPSLTELHLDGNKIT-KVDAASLKGLNNLAK 220
Query: 546 LNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE--- 602
L LS+NS SL++ ++ L L++N L ++P L + +++ + + +N+
Sbjct: 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIG 279
Query: 603 -GKVPTKGVFSNKTR---ISLSGN 622
G + K +SL N
Sbjct: 280 SNDFCPPGYNTKKASYSGVSLFSN 303
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 6e-27
Identities = 59/284 (20%), Positives = 108/284 (38%), Gaps = 24/284 (8%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L N+ + NL + + N+IS I G LV L + NQL
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHT-LILINNKIS-KISPGAFAPLVKLERLYLSKNQLK- 113
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNI--PSSLGNCR 468
+P ++ LQ L + N + L + +EL +N L+ + + +
Sbjct: 114 ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRN 527
L + ++ +T +P+ + +L+ L L N + + L NL +L +S N
Sbjct: 172 KLSYIRIADTNIT-TIPQGLP--PSLT-ELHLDGNKIT-KVDAASLKGLNNLAKLGLSFN 226
Query: 528 QVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSG------QI 581
+S +L+ L L+L+ N +P L+ K ++V+ L +NN+S
Sbjct: 227 SISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCP 285
Query: 582 PKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
P Y + +++ SN + F + L
Sbjct: 286 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-23
Identities = 57/330 (17%), Positives = 104/330 (31%), Gaps = 58/330 (17%)
Query: 224 YLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSG 283
L++ N+ + NL +L L L N+ I + L KL +++N
Sbjct: 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNK-ISKISPGAFAPLVKLERLYLSKNQLKE 114
Query: 284 PIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPL 343
L L ++ N + F+ L + + L N L + + F
Sbjct: 115 LPEKMPKT---LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF---- 167
Query: 344 TNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGI 403
KL + + + +L+ ++++ N+I+ + + L G
Sbjct: 168 QGMKKLSYIRIADTNITTIPQGLPPSLT----ELHLDGNKIT-KVDAAS-----LKG--- 214
Query: 404 DLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSS 463
L NL L L FN + SL N L EL L +N L +P
Sbjct: 215 ---------------LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258
Query: 464 LGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELD 523
L + + + + + N ++ A+ F P + +
Sbjct: 259 LADHKYIQVVYLHNNNIS-AIGSNDF------------------CPPGYNTKKASYSGVS 299
Query: 524 ISRNQVS-GEIPATLSAC-TSLEYLNLSYN 551
+ N V EI + C + L
Sbjct: 300 LFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 3e-22
Identities = 64/317 (20%), Positives = 115/317 (36%), Gaps = 51/317 (16%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
L + +N +T NL L + + N++S I+ F+
Sbjct: 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS----------------KISPGAFA 97
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
L LE LYL N+L LP L + EN + + F+ +
Sbjct: 98 P--------LVKLERLYLSKNQL-KELPEK---MPKTLQELRVHENEITKVRKSVFNGLN 145
Query: 294 NLVMLDLNLN-LFSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIA 351
+++++L N L S + F ++ LS++ +A N+ + P L
Sbjct: 146 QMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI-----TTIPQGLP----PSLTE 196
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L GN+ V S+ L+ + + N IS + +G N +L ++ N+L
Sbjct: 197 LHLDGNKITKVDAASLKGLNNLAK-LGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLV- 253
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEG------SIPFSLGNLTLLTELELQSNYLQ-GNIPSS 463
+P + +Q++YL N + P + + L SN +Q I S
Sbjct: 254 KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 313
Query: 464 LGNC-RSLLSLNVSQNK 479
C ++ + K
Sbjct: 314 TFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 4e-20
Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 32/218 (14%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG 465
L +P ++ + LL L N + NL L L L +N + P +
Sbjct: 41 LGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97
Query: 466 NCRSLLSLNVSQNKLTGALPKQIF-NITTLSL--------------------YLDLSNNF 504
L L +S+N+L LP+++ + L + ++L N
Sbjct: 98 PLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP 156
Query: 505 LNDSLPLEVG---NLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSL 561
L S +E G ++ L + I+ ++ IP SL L+L N SL
Sbjct: 157 LKSS-GIENGAFQGMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASL 212
Query: 562 SSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
L ++ L LS N++S L N L L++++N
Sbjct: 213 KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN 250
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 64/308 (20%), Positives = 106/308 (34%), Gaps = 46/308 (14%)
Query: 63 CQWTGVTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYG 113
C V C L L+N I I NL L + L +N
Sbjct: 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI-S 89
Query: 114 NIPHEVGR-LSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWM 172
I L +L+ L L+ N ++P +
Sbjct: 90 KISPGAFAPLVKLERLYLSKNQLK-ELPEKM-----PKT--------------------- 122
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL-SGRIP-NTLGQLRNSFYLNIAGN 230
L++L + +N +T + L+ + V+ + N L S I ++ Y+ IA
Sbjct: 123 -LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181
Query: 231 QFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFS 290
+ +P + SL L+L GN+ I + L L ++ N+ S S +
Sbjct: 182 NIT-TIPQGL--PPSLTELHLDGNK-ITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237
Query: 291 NTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLI 350
NT +L L LN N KVP + + + + L NN+ +ND T +
Sbjct: 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYS 296
Query: 351 ALGLYGNR 358
+ L+ N
Sbjct: 297 GVSLFSNP 304
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-27
Identities = 60/286 (20%), Positives = 101/286 (35%), Gaps = 64/286 (22%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKG-AFKSFVAECEALRNI 758
S+ +F +G+G FG V+ A+K + L + A + + E +AL +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 759 RHRNLIKIITICSSIDSHGVDF-------------------------------------- 780
H +++
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 781 -----------KALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
K +Y + + +L++W++ D + + LHI I IA A+E
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR-EHGVC--LHIFIQIAEAVE 178
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-YTCQVDDVETPSSSIGIK-- 883
+LH ++H DLKPSN+ D V VGDFGL + + V TP +
Sbjct: 179 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG 235
Query: 884 --GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFN 927
GT Y++PE G+ S D++S G++L E+
Sbjct: 236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR 281
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 3e-27
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 712 IGQGSFGFVYRG---ILGEGGLLVAVKVL--NLTRKGAFKS-FVAECEALRNIRHRNLIK 765
+G G VY IL VA+K + K F E + H+N++
Sbjct: 19 LGGGGMSTVYLAEDTILNI---KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+I + + + LV EY++ +L E++ LS+ ++ I I
Sbjct: 76 MIDVD---EEDDCYY--LVMEYIEGPTLSEYIESHGP------LSVDTAINFTNQILDGI 124
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
++ H I+H D+KP N+L+D + + DFG+AK L + + + + GT
Sbjct: 125 KHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL------SETSLTQTNHVLGT 175
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
V Y +PE G D+YS GI+L EM + + P
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 4e-27
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 14/244 (5%)
Query: 387 TIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE--GSIPFSLGNL 443
++P+GI + L ++ N+L KLT L L L N L G S
Sbjct: 21 SVPTGIPSSATRLE---LESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT 77
Query: 444 TLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNN 503
T L L+L N + + S+ L L+ + L +F +YLD+S+
Sbjct: 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 136
Query: 504 FLNDSLPLEV-GNLQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSL 561
+ L +L L ++ N + +L +L+LS P +
Sbjct: 137 HTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 195
Query: 562 SSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPT---KGVFSNKTRIS 618
+SL S++VL++S NN + L+ L+ L+ S NH + S+ ++
Sbjct: 196 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLN 254
Query: 619 LSGN 622
L+ N
Sbjct: 255 LTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-26
Identities = 58/241 (24%), Positives = 114/241 (47%), Gaps = 11/241 (4%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLT--GTIPHEIGKLTNLQL 424
+ ++ ++ + N++ ++P G+ L L + N L+ G T+L+
Sbjct: 24 TGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSL-GNCRSLLSLNVSQNKLTGA 483
L L FN + ++ + L L L+ Q + L+ S+ + R+L+ L++S
Sbjct: 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-V 140
Query: 484 LPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSAC-T 541
IFN + L ++ N ++ ++ L+NL LD+S+ Q+ ++ T +
Sbjct: 141 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLS 199
Query: 542 SLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENL-SFLEYLNISSNH 600
SL+ LN+S+N+F L S++VLD S N++ + L++ S L +LN++ N
Sbjct: 200 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 259
Query: 601 F 601
F
Sbjct: 260 F 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 7e-23
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYL--QGNIPSS 463
LT ++P I ++ L L+ N L+ LT LT+L L SN L +G S
Sbjct: 17 KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQS 73
Query: 464 LGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVEL 522
SL L++S N + + + L +LD ++ L V +L+NL+ L
Sbjct: 74 DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYL 131
Query: 523 DISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI-PLSLSSLKSVKVLDLSSNNLSGQI 581
DIS + +SLE L ++ NSF+ P + L+++ LDLS L Q+
Sbjct: 132 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QL 190
Query: 582 PKY-LENLSFLEYLNISSNH 600
+LS L+ LN+S N+
Sbjct: 191 SPTAFNSLSSLQVLNMSHNN 210
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 7e-21
Identities = 57/275 (20%), Positives = 88/275 (32%), Gaps = 40/275 (14%)
Query: 285 IPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLT 344
+P S+ L+L N F +L L+ L L+ N L T
Sbjct: 22 VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSD-FGTT 78
Query: 345 NCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGID 404
+ L ++ N + T+ S L L
Sbjct: 79 SLKYL----------------------------DLSFNGVI-TMSSNFLGLEQLEHLDFQ 109
Query: 405 LNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPS- 462
+ L + L NL L + + L+ L L++ N Q N
Sbjct: 110 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 169
Query: 463 SLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVE 521
R+L L++SQ +L L FN + L++S+N SL L +L
Sbjct: 170 IFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQV 227
Query: 522 LDISRNQVSGEIPATL--SACTSLEYLNLSYNSFR 554
LD S N + +SL +LNL+ N F
Sbjct: 228 LDYSLNHIM-TSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-17
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 14/249 (5%)
Query: 115 IPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNL-VGQIAANIGYNWMR 173
+P + S L L +N + L N L + +
Sbjct: 22 VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIP--NTLGQLRNSFYLNIAGNQ 231
L+ L ++ N + + ++ L L+ ++ + + L ++ + LRN YL+I+
Sbjct: 80 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTH 137
Query: 232 FSGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFS 290
I LSSLE+L + GN + DI L LT +++ P +F+
Sbjct: 138 TR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 196
Query: 291 NTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLI 350
+ S+L +L+++ N F + L +L L + N++ +L S L
Sbjct: 197 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSLA 251
Query: 351 ALGLYGNRF 359
L L N F
Sbjct: 252 FLNLTQNDF 260
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 1e-16
Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 14/218 (6%)
Query: 173 RLEKLSIADNHLTGQ--LPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGN 230
+L KLS++ N L+ + S + LK +++ N + + + L +L+ +
Sbjct: 53 QLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHS 111
Query: 231 QFSGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPI-PNS 288
S+ +L +L L + I L L +A N+F P+
Sbjct: 112 NLKQMSEFSVFLSLRNLIYLDISHTH-TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 170
Query: 289 FSNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCS 347
F+ NL LDL+ ++ F+ L +L L ++ NN + +
Sbjct: 171 FTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK------CLN 223
Query: 348 KLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQIS 385
L L N + + ++ +N+ +N +
Sbjct: 224 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 51/281 (18%), Positives = 89/281 (31%), Gaps = 41/281 (14%)
Query: 63 CQWTGVTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFY- 112
C T + C + T+L L + + + L+ L + L+ N
Sbjct: 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSF 66
Query: 113 GNIPHEVGR-LSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNW 171
+ + L L L+ N + +N G
Sbjct: 67 KGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQ----------------------- 102
Query: 172 MRLEKLSIADNHLTGQLPASI-GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGN 230
LE L ++L S+ +L L +++ L + L +AGN
Sbjct: 103 --LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160
Query: 231 QFSGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSF 289
F N P I L +L L L + + L +L L ++ NNF +
Sbjct: 161 SFQENFLPDIFTELRNLTFLDLSQCQ-LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 219
Query: 290 SNTSNLVMLDLNLNLFSGKVPINFSRLQ-NLSWLLLAGNNL 329
++L +LD +LN +L++L L N+
Sbjct: 220 KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 4e-27
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 30/217 (13%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITI 769
+G+GSFG V+R + G AVK + L V E A + ++ +
Sbjct: 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-----VFRVEELVACAGLSSPRIVPL--- 115
Query: 770 CSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+G + + E ++ GSL + + + +
Sbjct: 116 ------YGAVREGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRAL--YYLGQALEGL 163
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
EYLH I+HGD+K NVLL D A + DFG A L + I G
Sbjct: 164 EYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY--IPG 218
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T ++APE MG D++S ++L M P
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 116 bits (291), Expect = 5e-27
Identities = 64/308 (20%), Positives = 105/308 (34%), Gaps = 48/308 (15%)
Query: 279 NNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLD 338
NN NSF NT + D FS L G N N+
Sbjct: 8 NNNFSLSQNSFYNTISGTYADY------------FSAWDKWEKQALPGENR-----NEAV 50
Query: 339 FITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNL 398
+ ++ L L LP ++ T + + +N + ++P +L L
Sbjct: 51 SLLKECLINQFSELQLNRLNLS-SLPDNLPPQITV---LEITQNALI-SLPELPASLEYL 105
Query: 399 NGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQG 458
+ N+L+ T+P +L+ L +D N L +P L + +N L
Sbjct: 106 D---ACDNRLS-TLPELPA---SLKHLDVDNNQLT-MLPELPALLE---YINADNNQLT- 153
Query: 459 NIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQN 518
+P + L L+V N+LT LP+ ++ L D+S N L +SLP +
Sbjct: 154 MLPELPTS---LEVLSVRNNQLT-FLPELPESLEAL----DVSTNLL-ESLPAVPVRNHH 204
Query: 519 LVE----LDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSS 574
E N+++ IP + + + L N I SLS +
Sbjct: 205 SEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPR 263
Query: 575 NNLSGQIP 582
S
Sbjct: 264 IYFSMSDG 271
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 116 bits (291), Expect = 6e-27
Identities = 61/296 (20%), Positives = 105/296 (35%), Gaps = 46/296 (15%)
Query: 322 LLLAGNNLGNGAANDL---------DFITPLTNCSKLIALGLYGNRFGGVLPHSI-ANLS 371
++L NN + + N D+ + K G N +L + S
Sbjct: 3 IMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQFS 62
Query: 372 TTTVQINMGRNQISGTIPSGIG-NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
+ + R +S ++P + + L I N L ++P L L N
Sbjct: 63 E----LQLNRLNLS-SLPDNLPPQITVLE---ITQNALI-SLPELPASLEYLDACD---N 110
Query: 431 LLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFN 490
L ++P +L L++ +N L +P L +N N+LT LP+ +
Sbjct: 111 RLS-TLPELPASLK---HLDVDNNQLT-MLPELPAL---LEYINADNNQLT-MLPELPTS 161
Query: 491 ITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLE----YL 546
+ L + NN L LP +L+ LD+S N + +PA E +
Sbjct: 162 LEVL----SVRNNQLT-FLPELPESLE---ALDVSTNLLE-SLPAVPVRNHHSEETEIFF 212
Query: 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
N IP ++ SL + L N LS +I + L + + +F
Sbjct: 213 RCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFS 267
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 3e-25
Identities = 70/468 (14%), Positives = 132/468 (28%), Gaps = 97/468 (20%)
Query: 122 LSRLDTLMLANNSFSGK---IPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMR-LEKL 177
L + L+ NSF + + A + + + + +L
Sbjct: 5 LPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQFSEL 64
Query: 178 SIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVP 237
+ +L+ LP ++ + V+ + +N L +P L YL+ N+ S +P
Sbjct: 65 QLNRLNLS-SLPDNLPPQ--ITVLEITQNALI-SLPELPASLE---YLDACDNRLS-TLP 116
Query: 238 PSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM 297
+SL+ L + N+L LP L
Sbjct: 117 ELP---ASLKHLDVDNNQLT-MLPELPA----------------------------LLEY 144
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
++ + N + +P +L L + N L
Sbjct: 145 INADNNQLT-MLP---ELPTSLEVLSVRNNQLT--------------------------- 173
Query: 358 RFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDL----NQLTGTIP 413
LP +L +++ N + ++P+ + I N++T IP
Sbjct: 174 ----FLPELPESLEA----LDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIP 223
Query: 414 HEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473
I L + L+ N L I SL T + Y + R L
Sbjct: 224 ENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPL--A 281
Query: 474 NVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEI 533
+ + I + + +N F L + + R QV+
Sbjct: 282 DAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRL--SDTVSARNTSGFREQVA--- 336
Query: 534 PATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQI 581
A L ++ L + S ++ +L L Q
Sbjct: 337 -AWLEKLSASAELRQQSFAVAADATESCEDRVALTWNNLRKTLLVHQA 383
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 3e-09
Identities = 37/233 (15%), Positives = 64/233 (27%), Gaps = 46/233 (19%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
L + N + +L L ++ DNN +P L L + NN +
Sbjct: 123 KHLDVDNNQLT-MLPELPALLEYINA----DNNQLTMLPELPTSLEVLS---VRNNQLT- 173
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
+P LE L ++ N L LPA
Sbjct: 174 FLPELPE----------------------------SLEALDVSTNLLE-SLPAVPVRNHH 204
Query: 198 LK----VINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253
+ ENR++ IP + L + + + N S + S+ ++ +
Sbjct: 205 SEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYH--- 260
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFS 306
I D F + S + + + N FS
Sbjct: 261 GPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFS 313
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 6e-27
Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
++G+G++G VY G + +A+K + + E ++++H+N+++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY---- 84
Query: 771 SSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
G + + E + GSL L + I I ++
Sbjct: 85 -----LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE-QTIG--FYTKQILEGLK 136
Query: 827 YLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YLH + I+H D+K NVL++ + V + DFG +K ++ + + + GT
Sbjct: 137 YLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINPCTET--FTGT 186
Query: 886 VGYVAPE--YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ Y+APE A D++S G ++EM K P
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 9e-27
Identities = 92/465 (19%), Positives = 154/465 (33%), Gaps = 27/465 (5%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
+ LS++ N ++ I LS L+V+ + NR+ + ++ YL+++ N+
Sbjct: 54 TKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ 113
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLT-LPKLTNFVIAENNF-SGPIPNSFSN 291
N+ ++SL L L N LP+ L KLT ++ F +
Sbjct: 114 -NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL 169
Query: 292 TSNLVMLDLNLNLFSGKVPINFSRLQNLS-WLLLAGNNLGNGAANDLDFITPLTNCSKLI 350
+ ++LDL G + L+ N+L + N S +
Sbjct: 170 HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIK 229
Query: 351 ALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSG-IGNLVNLNGFGIDLNQLT 409
R L + V + ++ + I +T
Sbjct: 230 LNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTIT 289
Query: 410 GTIPHEIG-----KLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSL 464
I E L +L + ++ + S + L +
Sbjct: 290 ERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCP 349
Query: 465 GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDI 524
+ S LN +QN T Q + L L N L + +N+ L+
Sbjct: 350 PSPSSFTFLNFTQNVFT-DSVFQGCSTLKRLQTLILQRNGL-KNFFKVALMTKNMSSLET 407
Query: 525 SRNQV----SGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ 580
+ S T + S+ LNLS N G + L VKVLDL +N +
Sbjct: 408 LDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPP--KVKVLDLHNNRIM-S 464
Query: 581 IPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNK---TRISLSGN 622
IPK + +L L+ LN++SN K GVF I L N
Sbjct: 465 IPKDVTHLQALQELNVASNQL--KSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-25
Identities = 83/473 (17%), Positives = 167/473 (35%), Gaps = 29/473 (6%)
Query: 120 GRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSI 179
R L L+ NS S ++S S L L +N + + ++ LE L +
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSEL-RVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107
Query: 180 ADNHLTGQLPASIGNLSVLKVINVEENRL-SGRIPNTLGQLRNSFYLNIAGNQFSGNVPP 238
+ N L + ++ L+ +++ N + G L +L ++ +F
Sbjct: 108 SHNRLQN-ISC--CPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLL 164
Query: 239 SIYNLS-SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENN-FSGPIPNSFSNTSNLV 296
+ +L S LL L + G + + + + V N+ FS + S + +L
Sbjct: 165 PVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQ 224
Query: 297 MLDLNLNLFSGKVPINFSR--LQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGL 354
+ ++ LN + + + F + + L + ++ + + L +
Sbjct: 225 LSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHI-ETTWKCSVKLFQFFWPRPVEYLNI 283
Query: 355 YGNRFGGVLPHSIANLSTTTVQI----NMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTG 410
Y + S T ++ ++ + + +N + ++
Sbjct: 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ--GNIPSSLGNCR 468
++ L N+ S+ L L L LQ N L+ + N
Sbjct: 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMS 403
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN----DSLPLEVGNLQNLVELDI 524
SL +L+VS N L + L L+LS+N L LP + LD+
Sbjct: 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP------PKVKVLDL 457
Query: 525 SRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL-SLSSLKSVKVLDLSSNN 576
N++ IP ++ +L+ LN++ N + +P L S++ + L N
Sbjct: 458 HNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-23
Identities = 77/394 (19%), Positives = 133/394 (33%), Gaps = 21/394 (5%)
Query: 174 LEKLSIADNHLTGQLP--ASIGNLSVLKVINVEENRLSGRIPNTLGQLR-NSFYLNIAGN 230
L L ++ N LP GNL+ L + + + + L + L++
Sbjct: 123 LRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSY 181
Query: 231 QFSGNVPPSIYNLSSLEL-LYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSF 289
G S+ ++ L L N L L L I N+ + +F
Sbjct: 182 HIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF 241
Query: 290 SNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSWL-----LLAGNNLGNGAANDLDFITPL 343
+ LN+ L + +L W L N + +F
Sbjct: 242 LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSE 301
Query: 344 TNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGI 403
T L+ + F + + ++ + + + +
Sbjct: 302 TALKSLMIEHVKNQVFLFSKEALYSVFAEMNIK-MLSISDTPFIHMVCPPSPSSFTFLNF 360
Query: 404 DLNQLTGTIPHEIGKLTNLQLLYLDFNLLE--GSIPFSLGNLTLLTELELQSNYLQGNIP 461
N T ++ L LQ L L N L+ + N++ L L++ N L +
Sbjct: 361 TQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAY 420
Query: 462 SSL-GNCRSLLSLNVSQNKLTGALPKQIFNITTLSL-YLDLSNNFLNDSLPLEVGNLQNL 519
S+L LN+S N LT +F + LDL NN + S+P +V +LQ L
Sbjct: 421 DRTCAWAESILVLNLSSNMLT----GSVFRCLPPKVKVLDLHNNRI-MSIPKDVTHLQAL 475
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLSYNSF 553
EL+++ NQ+ TSL+Y+ L N +
Sbjct: 476 QELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 96.1 bits (239), Expect = 1e-20
Identities = 75/404 (18%), Positives = 141/404 (34%), Gaps = 28/404 (6%)
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
VP + + L L N I L + L +L ++ N + F +L
Sbjct: 46 VPKDL--PPRTKALSLSQNS-ISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDL 102
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
LD++ N I+ + +L L L+ N+ + L N +KL LGL
Sbjct: 103 EYLDVSHNRLQN---ISCCPMASLRHLDLSFNDF-----DVLPVCKEFGNLTKLTFLGLS 154
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI--GNLVNLNGFGIDLNQLTGTIP 413
+F + +A+L + + +++ I G + N L+ + + +
Sbjct: 155 AAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVN 214
Query: 414 HEIGKLTNLQLLYLDFNLLEG----SIPFSLGNLTLLTELELQSNYLQGNIPSSLGNC-- 467
+ L +LQL + N + L L + LQ L
Sbjct: 215 MSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFW 274
Query: 468 -RSLLSLNVSQNKLTGALPKQIFNITTLSL----YLDLSNNFLNDSLPLEVGNLQNLVEL 522
R + LN+ +T + ++ F + +L + N S +
Sbjct: 275 PRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIK 334
Query: 523 DISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLS--GQ 580
+S + + +S +LN + N F + S+LK ++ L L N L +
Sbjct: 335 MLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK 394
Query: 581 IPKYLENLSFLEYLNISSNHFEGKVPTKGVF--SNKTRISLSGN 622
+ +N+S LE L++S N + + ++LS N
Sbjct: 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSN 438
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 8e-06
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 13/184 (7%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
+ L I + S ++ N F ++ L RL TL+L N
Sbjct: 331 MNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390
Query: 137 -----GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPAS 191
+ N+S L L N+L + L+++ N LTG +
Sbjct: 391 NFFKVALMTKNMSSLETLDVSL---NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRC 447
Query: 192 IGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY-NLSSLELLY 250
+ +KV+++ NR+ IP + L+ LN+A NQ +VP ++ L+SL+ ++
Sbjct: 448 LPPK--VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIW 503
Query: 251 LRGN 254
L N
Sbjct: 504 LHDN 507
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 1e-26
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 711 MIGQGSFGFVYRG---ILGEGGLLVAVKVL--NLTRKGAFKS-FVAECEALRNIRHRNLI 764
++G G V+ VAVKVL +L R +F F E + + H ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHR---DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+ + ++ +V EY+ +L + +H ++ + + + D A
Sbjct: 76 AVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEVIADACQA 128
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG-IK 883
+ + H + IIH D+KP+N+++ V DFG+A+ + D + +
Sbjct: 129 LNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA-----IADSGNSVTQTAAVI 180
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y++PE G DVYS G +L E+ + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 6e-26
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 33/227 (14%)
Query: 705 EFSTSNMIGQGSFG-FVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRN 762
F +++G G+ G VYRG+ VAVK + F E + LR H N
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFD--NRDVAVKRIL---PECFSFADREVQLLRESDEHPN 79
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+I+ C+ D F+ + E +L+E++ + H ++ + +
Sbjct: 80 VIRYF--CTEKDR---QFQYIAIELCA-ATLQEYVEQKDFAH-----LGLEPITLLQQTT 128
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLL-----DHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ +LH I+H DLKP N+L+ + A + DFGL K L + S
Sbjct: 129 SGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL----AVGRHSFS 181
Query: 878 SSIGIKGTVGYVAPEY---GMGSEASMAGDVYSFGILLLEMFIRKRP 921
G+ GT G++APE + D++S G + +
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH 228
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 8e-26
Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 33/262 (12%)
Query: 673 RRRRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLV 732
R+ + + + + + + +S +S IG G V++ L E +
Sbjct: 25 FERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIY 83
Query: 733 AVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQN 790
A+K +NL S+ E L ++ + KII + + + +V E N
Sbjct: 84 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLYDYEITDQYIY--MVMEC-GN 139
Query: 791 GSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH 850
L WL + D + ++ A+ +H H I+H DLKP+N L+
Sbjct: 140 IDLNSWLK----KKKSIDPWERK--SYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD 190
Query: 851 DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE-----------YGMGSEA 899
M+ + DFG+A + Q D S G V Y+ PE S+
Sbjct: 191 GML-KLIDFGIANQM---QPDTTSVVKDS--QVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 900 SMAGDVYSFGILLLEMFIRKRP 921
S DV+S G +L M K P
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTP 266
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 29/217 (13%)
Query: 711 MIGQGSFGFVYRG---ILGEGGLLVAVKVL--NLTRKGAFKS-FVAECEALRNIRHRNLI 764
++G+G G VY + +VA+K++ L+ F++ E ++ +
Sbjct: 41 LVGRGGMGDVYEAEDTVRER---IVALKLMSETLSSDPVFRTRMQREARTAGRLQEPH-- 95
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ I + G + + + L L L+ + + I I A
Sbjct: 96 -VVPIHDFGEIDGQLY--VDMRLINGVDLAAMLRRQGP------LAPPRAVAIVRQIGSA 146
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
++ H H D+KP N+L+ D A++ DFG+A D + + G
Sbjct: 147 LDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIAS-----ATTDEKLTQLGNTV-G 197
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
T+ Y+APE S A+ D+Y+ +L E P
Sbjct: 198 TLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP 234
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-25
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 33/256 (12%)
Query: 679 HKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN 738
H +S ++ + + +S +S IG G V++ L E + A+K +N
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVN 61
Query: 739 LTR--KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEW 796
L S+ E L ++ + KII + + + +V E N L W
Sbjct: 62 LEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRLYDYEITDQYIY--MVMECG-NIDLNSW 117
Query: 797 LHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856
L + +R ++ A+ +H H I+H DLKP+N L+ M+ +
Sbjct: 118 LKKKKS------IDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KL 167
Query: 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE-----------YGMGSEASMAGDV 905
DFG+A + V+ GTV Y+ PE S+ S DV
Sbjct: 168 IDFGIANQMQPDTTSVVKD-----SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222
Query: 906 YSFGILLLEMFIRKRP 921
+S G +L M K P
Sbjct: 223 WSLGCILYYMTYGKTP 238
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-25
Identities = 57/272 (20%), Positives = 101/272 (37%), Gaps = 22/272 (8%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L N + L + + N+IS I L L I N L
Sbjct: 59 LDLQNNDISELRKDDFKGLQHLYA-LVLVNNKIS-KIHEKAFSPLRKLQKLYISKNHLV- 115
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ-GNIPSSLGNCRS 469
IP + ++L L + N + L + +E+ N L+ +
Sbjct: 116 EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLK 173
Query: 470 LLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQ 528
L L +S+ KLT +PK + TL+ L L +N + ++ LE L L + NQ
Sbjct: 174 LNYLRISEAKLT-GIPKDLP--ETLN-ELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQ 228
Query: 529 VSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIP------ 582
+ +LS +L L+L N +P L LK ++V+ L +NN++ ++
Sbjct: 229 IRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCP 286
Query: 583 -KYLENLSFLEYLNISSNHFEGKVPTKGVFSN 613
+ ++ +++ +N F
Sbjct: 287 VGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-23
Identities = 68/317 (21%), Positives = 113/317 (35%), Gaps = 30/317 (9%)
Query: 245 SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNL 304
L ++ L ++P +I P T + N+ S + F +L L L N
Sbjct: 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNK 89
Query: 305 FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLP 364
S FS L+ L L ++ N+L N S L+ L ++ NR V
Sbjct: 90 ISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP---------SSLVELRIHDNRIRKVPK 140
Query: 365 HSIANLSTTTVQINMGRNQI-SGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQ 423
+ L I MG N + + G + + LN I +LT IP ++ L
Sbjct: 141 GVFSGLRNMNC-IEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLN 196
Query: 424 LLYLDFNLLEGSIP-FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG 482
L+LD N ++ +I L + L L L N ++ SL +L L++ NKL+
Sbjct: 197 ELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS- 254
Query: 483 ALPKQIFNITTLSLYLDLSNNFLND------SLPLEVGNLQNLVELDISRNQVS-GEIPA 535
+P + ++ L + L N + + + N V E+
Sbjct: 255 RVPAGLPDLKLLQ-VVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQP 313
Query: 536 TLSAC-TSLEYLNLSYN 551
C T +
Sbjct: 314 ATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 5e-19
Identities = 61/307 (19%), Positives = 97/307 (31%), Gaps = 45/307 (14%)
Query: 63 CQWTGVTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYG 113
C V C T L L+N I + L L + L +N
Sbjct: 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI-S 91
Query: 114 NIPHEV-GRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWM 172
I + L +L L ++ N +IP NL
Sbjct: 92 KIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPS--------------------------- 123
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL-SGRIPNTLGQLRNSFYLNIAGNQ 231
L +L I DN + L + I + N L + YL I+ +
Sbjct: 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAK 183
Query: 232 FSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSN 291
+ +P + +L L+L N+ I ++ ++ L KL + N S S
Sbjct: 184 LT-GIPKDL--PETLNELHLDHNK-IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF 239
Query: 292 TSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIA 351
L L L+ N S +VP L+ L + L NN+ ND + +
Sbjct: 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNG 298
Query: 352 LGLYGNR 358
+ L+ N
Sbjct: 299 ISLFNNP 305
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 8e-19
Identities = 45/217 (20%), Positives = 74/217 (34%), Gaps = 31/217 (14%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG 465
L +P EI + LL L N + L L L L +N + +
Sbjct: 43 LGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFS 99
Query: 466 NCRSLLSLNVSQNKLTGALPKQIF-NITTLSL--------------------YLDLSNNF 504
R L L +S+N L +P + ++ L + +++ N
Sbjct: 100 PLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNP 158
Query: 505 LNDSLPLEVGNLQ--NLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLS 562
L +S E G L L IS +++ IP +L L+L +N + L
Sbjct: 159 LENS-GFEPGAFDGLKLNYLRISEAKLT-GIPK--DLPETLNELHLDHNKIQAIELEDLL 214
Query: 563 SLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
+ L L N + L L L L++ +N
Sbjct: 215 RYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNN 251
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 7e-09
Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 39/233 (16%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFY-GNIPHEVGRLSRLDTLMLANNSFS 136
+L + + I + L + I++ N +L+ L ++ +
Sbjct: 126 VELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
IP +L L +L + N + + S
Sbjct: 186 -GIPKDL---------------------------PETLNELHLDHNKIQAIELEDLLRYS 217
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRL 256
L + + N++ +L L L++ N+ S VP + +L L+++YL N
Sbjct: 218 KLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNN- 275
Query: 257 IGSLPID------IGLTLPKLTNFVIAENNFSGPI--PNSFSNTSNLVMLDLN 301
I + ++ G+ + N P +F ++ + +
Sbjct: 276 ITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFG 328
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-25
Identities = 62/259 (23%), Positives = 97/259 (37%), Gaps = 38/259 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRN 762
+S IG G V++ L E + A+K +NL S+ E L ++ +
Sbjct: 10 IYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
KII + + + +V E N L WL + +R ++
Sbjct: 69 -DKIIRLYDYEITDQYIY--MVMEC-GNIDLNSWLKKKKS------IDPWERKSYWKNML 118
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
A+ +H H I+H DLKP+N L+ M+ + DFG+A + V+
Sbjct: 119 EAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD-----SQ 169
Query: 883 KGTVGYVAPE-----------YGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLT 931
GTV Y+ PE S+ S DV+S G +L M K P F +
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----F-QQII 224
Query: 932 IHEFAMKALPQRVIEIVDP 950
+ A+ EI P
Sbjct: 225 NQISKLHAIIDPNHEIEFP 243
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 62/272 (22%), Positives = 103/272 (37%), Gaps = 31/272 (11%)
Query: 673 RRRRFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLV 732
+ RR + + ++ S E S F + +G GS+G V++ E G L
Sbjct: 27 QPRRVSFRGEASETLQSPGYDPSRPE-SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLY 85
Query: 733 AVKVLNLTRKGAF--KSFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQ 789
AVK +G +AE + + +H +++ + + G+ + L E
Sbjct: 86 AVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE---QAWEEGGILY--LQTELCG 140
Query: 790 NGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849
SL++ L Q D A+ +LH ++H D+KP+N+ L
Sbjct: 141 -PSLQQHCEAWGAS-----LPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLG 191
Query: 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFG 909
+GDFGL L T + +G Y+APE GS A DV+S G
Sbjct: 192 PRGRCKLGDFGLLVEL--------GTAGAGEVQEGDPRYMAPELLQGS-YGTAADVFSLG 242
Query: 910 ILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941
+ +LE+ + G + LP
Sbjct: 243 LTILEVACNMEL----PHGGEGWQQLRQGYLP 270
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-25
Identities = 43/266 (16%), Positives = 78/266 (29%), Gaps = 33/266 (12%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEG-----GLLVAVKVLNLTRKGAFKSFVAECEALRNIR 759
+++G+G+F VY G+ +KV F E L+
Sbjct: 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ S+ + LV E G+L ++ + + + + A+
Sbjct: 126 QHM---FMKFYSAHLFQ--NGSVLVGELYSYGTLLNAINLYKNTPEK-VMPQGLVISFAM 179
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG-----------DFGLAKFLYTC 868
+ Y IE +H IIHGD+KP N +L + + D G + +
Sbjct: 180 RMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF 236
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND 928
+ T T G+ E + D + + M
Sbjct: 237 PKGTIFT-----AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291
Query: 929 GLTIHEFAMKALPQRVI--EIVDPLL 952
+ LP + E +L
Sbjct: 292 ECKPEGL-FRRLPHLDMWNEFFHVML 316
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 7e-25
Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 60/239 (25%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRH 760
+ +G+G F + + + A K++ L + + E R++ H
Sbjct: 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74
Query: 761 RNLIKIITICSSIDSHGV-DFKALVY---EYMQNGSLEEWLHHSNDQHDVCDLSLIQRL- 815
++++ HG + V+ E + SL E + L
Sbjct: 75 QHVVGF---------HGFFEDNDFVFVVLELCRRRSLLELHKRR------------KALT 113
Query: 816 -----HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA-------K 863
+ I +YLH + +IH DLK N+ L+ D+ +GDFGLA +
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170
Query: 864 FLYT-CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
C GT Y+APE S DV+S G ++ + + K P
Sbjct: 171 RKKVLC---------------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 55/250 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVA--------------ECEA 754
+ QG F + + A+K L +K F E +
Sbjct: 39 LNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI 96
Query: 755 LRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL--HHSNDQHDVCDLSLI 812
+ +I++ + I I ++ + ++YEYM+N S+ ++ D++ C + +
Sbjct: 97 ITDIKNEYCLTCEGI---ITNYDEVY--IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF-----LYT 867
I + + Y+H+ I H D+KPSN+L+D + + DFG +++ +
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209
Query: 868 -CQVDDVETPSSSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGILLLEMFIRKRPTDS 924
GT ++ PE S D++S GI L MF P
Sbjct: 210 SR---------------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP--- 251
Query: 925 MFNDGLTIHE 934
F+ +++ E
Sbjct: 252 -FSLKISLVE 260
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-24
Identities = 50/263 (19%), Positives = 88/263 (33%), Gaps = 60/263 (22%)
Query: 680 KSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN- 738
+ I ++ + +G+G F + + + A K++
Sbjct: 17 APGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPK 76
Query: 739 --LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGV-DFKALVY---EYMQNGS 792
L + + E R++ H++++ HG + V+ E + S
Sbjct: 77 SLLLKPHQREKMSMEISIHRSLAHQHVVGF---------HGFFEDNDFVFVVLELCRRRS 127
Query: 793 LEEWLHHSNDQHDVCDLSLIQRL------HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNV 846
L E + L + I +YLH + +IH DLK N+
Sbjct: 128 LLELHKRR------------KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNL 172
Query: 847 LLDHDMVAHVGDFGLA-------KFLYT-CQVDDVETPSSSIGIKGTVGYVAPEYGMGSE 898
L+ D+ +GDFGLA + C GT Y+APE
Sbjct: 173 FLNEDLEVKIGDFGLATKVEYDGERKKVLC---------------GTPNYIAPEVLSKKG 217
Query: 899 ASMAGDVYSFGILLLEMFIRKRP 921
S DV+S G ++ + + K P
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPP 240
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 7e-24
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 20/260 (7%)
Query: 340 ITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLN 399
I P + I + + + A+L T ++ ++ TI G+ L NL
Sbjct: 12 IFPDPALANAIKIAAGKSNVTDTVT--QADLDGIT-TLSAFGTGVT-TI-EGVQYLNNLI 66
Query: 400 GFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGN 459
G + NQ+T P + LT + L L N L ++ L + L+L S +
Sbjct: 67 GLELKDNQITDLAP--LKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDV 122
Query: 460 IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNL 519
P L +L L + N++T P + +T L YL + N ++D PL NL L
Sbjct: 123 TP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQ-YLSIGNAQVSDLTPLA--NLSKL 175
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSG 579
L N++S +I L++ +L ++L N PL+ + ++ ++ L++ ++
Sbjct: 176 TTLKADDNKIS-DISP-LASLPNLIEVHLKNNQISDVSPLA--NTSNLFIVTLTNQTITN 231
Query: 580 QIPKYLENLSFLEYLNISSN 599
Q Y NL + S
Sbjct: 232 QPVFYNNNLVVPNVVKGPSG 251
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 24/243 (9%)
Query: 382 NQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLG 441
I+ P L N + +T T+ L + L + +I +
Sbjct: 7 TAINVIFP--DPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIEG-VQ 60
Query: 442 NLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLS--LYLD 499
L L LEL+ N + ++ + L N + L +S N L + I L LD
Sbjct: 61 YLNNLIGLELKDNQIT-DL-APLKNLTKITELELSGNPLK-----NVSAIAGLQSIKTLD 113
Query: 500 LSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL 559
L++ + D PL L NL L + NQ++ I L+ T+L+YL++ PL
Sbjct: 114 LTSTQITDVTPLA--GLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTPL 169
Query: 560 SLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISL 619
+ +L + L N +S P L +L L +++ +N P SN ++L
Sbjct: 170 A--NLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLAN-TSNLFIVTL 224
Query: 620 SGN 622
+
Sbjct: 225 TNQ 227
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 2e-21
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 29/289 (10%)
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
L++ + + + ++ L +T + I +NL+ L+L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA---DLDGITTLSAFGTGVTT-IEG-VQYLNNLIGLELK 71
Query: 302 LNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGG 361
N + L ++ L L+GN L N ++ + + L L +
Sbjct: 72 DNQIT--DLAPLKNLTKITELELSGNPLKN--------VSAIAGLQSIKTLDLTSTQITD 121
Query: 362 VLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTN 421
V P +A LS V + + NQI+ S + L NL I Q++ P + L+
Sbjct: 122 VTP--LAGLSNLQV-LYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLTP--LANLSK 174
Query: 422 LQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT 481
L L D N + I L +L L E+ L++N + S L N +L + ++ +T
Sbjct: 175 LTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLTNQTIT 230
Query: 482 GALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
+ +F L + + P + + +++ N S
Sbjct: 231 N---QPVFYNNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTS 276
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 2e-21
Identities = 53/294 (18%), Positives = 107/294 (36%), Gaps = 38/294 (12%)
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
L N + +N+ + + + L +G +I +
Sbjct: 13 FPDPALANAIKIAAGKSNVTD--------TVTQADLDGITTLSAFGTGV-----TTIEGV 59
Query: 371 STTT--VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLD 428
+ + + NQI T + + NL + + N L I L +++ L L
Sbjct: 60 QYLNNLIGLELKDNQI--TDLAPLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLT 115
Query: 429 FNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQI 488
+ P + L+ L L L N + NI S L +L L++ +++ +
Sbjct: 116 STQITDVTPLA--GLSNLQVLYLDLNQIT-NI-SPLAGLTNLQYLSIGNAQVS-----DL 166
Query: 489 FNITTLSL--YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYL 546
+ LS L +N ++D PL +L NL+E+ + NQ+S P L+ ++L +
Sbjct: 167 TPLANLSKLTTLKADDNKISDISPLA--SLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222
Query: 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQI-PKYLENLSFLEYLNISSN 599
L+ + + ++ V ++ I P + + N++ N
Sbjct: 223 TLTNQTITN---QPVFYNNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWN 273
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 57/323 (17%), Positives = 109/323 (33%), Gaps = 58/323 (17%)
Query: 194 NLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253
L+ I ++ ++ T L L+ G + + + L++L L L+
Sbjct: 17 ALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKD 72
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
N++ P+ L K+T ++ N + ++ LDL +
Sbjct: 73 NQITDLAPLK---NLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITD--VTPL 125
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTT 373
+ L NL L L N + N I+PL + L L + + +++L
Sbjct: 126 AGLSNLQVLYLDLNQITN--------ISPLAGLTNLQYLSIGNAQ--------VSDL--- 166
Query: 374 TVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE 433
+ + NL L D N+++ I + L NL ++L N +
Sbjct: 167 ----------------TPLANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQIS 208
Query: 434 GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITT 493
P L N + L + L + + N L+ NV + T
Sbjct: 209 DVSP--LANTSNLFIVTLTNQTITNQPVFYNNN---LVVPNVVKGPSG-----APIAPAT 258
Query: 494 LSLYLDLSNNFLNDSLPLEVGNL 516
+S ++ L +L + N+
Sbjct: 259 ISDNGTYASPNLTWNLTSFINNV 281
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 14/143 (9%)
Query: 485 PKQIFNITTLS-----LYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSA 539
P I I + + + + D++ +L + L V+ I +
Sbjct: 6 PTAINVIFPDPALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVT-TIEG-VQY 61
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
+L L L N P L +L + L+LS N L + L ++ L+++S
Sbjct: 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK--NVSAIAGLQSIKTLDLTST 117
Query: 600 HFEGKVPTKGVFSNKTRISLSGN 622
P G SN + L N
Sbjct: 118 QITDVTPLAG-LSNLQVLYLDLN 139
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 25/236 (10%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
T+L L + + + L ++ +DL P + LS L L L N +
Sbjct: 88 TELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQIT- 142
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
I L+G +NL + + N +L L DN ++ + + +L
Sbjct: 143 NIS-PLAGLTNLQYLSIGNAQVSD--LTPLA-NLSKLTTLKADDNKIS-DISP-LASLPN 196
Query: 198 LKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLI 257
L ++++ N++S P L N F + + + NL ++ I
Sbjct: 197 LIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAPI 254
Query: 258 GSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS----NLVMLDLNLNLFSGKV 309
I N A N + + + +N S V FSG V
Sbjct: 255 APATI--------SDNGTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTV 302
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 7e-24
Identities = 52/232 (22%), Positives = 84/232 (36%), Gaps = 60/232 (25%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRH 760
+F +G+G FG VY + ++A+KVL L + G E E ++RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 761 RNLIKIITICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
N++++ +G F L+ EY G++ L +
Sbjct: 69 PNILRL---------YGY-FHDATRVYLILEYAPLGTVYRELQKL------------SKF 106
Query: 816 ------HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-----F 864
++A A+ Y H +IH D+KP N+LL + DFG +
Sbjct: 107 DEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 865 LYT-CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
C GT+ Y+ PE G D++S G+L E
Sbjct: 164 RTDLC---------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 9e-24
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 14/238 (5%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
+ + T +N+ N I I + +L +L + N + I L +L L
Sbjct: 71 QGIPSNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTL 128
Query: 426 YLDFNLLEGSIPF-SLGNLTLLTELELQSNYLQGNIPS-SLGNCRSLLSLNVSQ-NKLTG 482
L N L IP + L+ L EL L++N ++ +IPS + SL+ L++ + KL
Sbjct: 129 ELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLE- 185
Query: 483 ALPKQIF-NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACT 541
+ + F + L YL+L + +P + L L EL++S N P + +
Sbjct: 186 YISEGAFEGLFNLK-YLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLS 242
Query: 542 SLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
SL+ L + + + L S+ L+L+ NNLS L +L L++ N
Sbjct: 243 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 7e-20
Identities = 53/230 (23%), Positives = 89/230 (38%), Gaps = 11/230 (4%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L N + + +L V + +GRN I I G L +LN + N LT
Sbjct: 80 LNLMENNIQMIQADTFRHLHHLEV-LQLGRNSIR-QIEVGAFNGLASLNTLELFDNWLT- 136
Query: 411 TIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQS-NYLQGNIPSSLGNCR 468
IP L+ L+ L+L N +E ++ + L L+L L+ +
Sbjct: 137 VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLF 196
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRN 527
+L LN+ + +P + + L L++S N + L +L +L + +
Sbjct: 197 NLKYLNLGMCNIK-DMP-NLTPLVGLE-ELEMSGNHF-PEIRPGSFHGLSSLKKLWVMNS 252
Query: 528 QVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
QVS SL LNL++N+ + L+ + L L N
Sbjct: 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 23/249 (9%)
Query: 285 IPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITP-- 342
+P SN L+L N F L +L L L N++ I
Sbjct: 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ--------IEVGA 118
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGF 401
+ L L L+ N + + LS ++ + N I +IPS + +L
Sbjct: 119 FNGLASLNTLELFDNWLTVIPSGAFEYLSKLR-ELWLRNNPIE-SIPSYAFNRVPSLMRL 176
Query: 402 GI-DLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGN 459
+ +L +L I L NL+ L L ++ +P +L L L ELE+ N+
Sbjct: 177 DLGELKKLE-YISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEI 233
Query: 460 IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQN 518
P S SL L V ++++ + + F+ + L+L++N L+ SLP ++ L+
Sbjct: 234 RPGSFHGLSSLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRY 291
Query: 519 LVELDISRN 527
LVEL + N
Sbjct: 292 LVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 3e-18
Identities = 53/261 (20%), Positives = 95/261 (36%), Gaps = 39/261 (14%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
L++ +N++ + +L L+V+ + N + L + L + N
Sbjct: 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135
Query: 233 SGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIP-NSFS 290
+ +P LS L L+LR N I S+P +P L + E I +F
Sbjct: 136 T-VIPSGAFEYLSKLRELWLRNNP-IESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFE 193
Query: 291 NTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLI 350
NL L+L + +P N + L L L ++GN+ S L
Sbjct: 194 GLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGS------FHGLSSLK 245
Query: 351 ALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTG 410
L + ++ + ++ L+ +LV LN + N L+
Sbjct: 246 KLWVMNSQVSLIERNAFDGLA----------------------SLVELN---LAHNNLS- 279
Query: 411 TIPHEI-GKLTNLQLLYLDFN 430
++PH++ L L L+L N
Sbjct: 280 SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 2e-17
Identities = 48/222 (21%), Positives = 80/222 (36%), Gaps = 38/222 (17%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG 465
L+ +P I +N + L L N ++ + +L L L+L N ++ +
Sbjct: 64 RGLS-EVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFN 120
Query: 466 NCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDIS 525
SL +L + N LT +P F L L EL +
Sbjct: 121 GLASLNTLELFDNWLT-VIPSGAFE------------------------YLSKLRELWLR 155
Query: 526 RNQVSGEIPA-TLSACTSLEYLNLS-YNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
N + IP+ + SL L+L + L ++K L+L N+ +P
Sbjct: 156 NNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP- 212
Query: 584 YLENLSFLEYLNISSNHFEGKVPTKGVFSNKT---RISLSGN 622
L L LE L +S NHF G F + ++ + +
Sbjct: 213 NLTPLVGLEELEMSGNHFP--EIRPGSFHGLSSLKKLWVMNS 252
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 3e-15
Identities = 56/281 (19%), Positives = 92/281 (32%), Gaps = 44/281 (15%)
Query: 63 CQWTG--VTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNF 111
C V C R L L +I I + +L L ++ L N+
Sbjct: 52 CSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI 111
Query: 112 YGNIPHEV-GRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYN 170
I L+ L+TL L +N + I +
Sbjct: 112 -RQIEVGAFNGLASLNTLELFDNWLT-------------------------VIPSGAFEY 145
Query: 171 WMRLEKLSIADNHLTGQLPASI-GNLSVLKVINV-EENRLSGRIPNTLGQLRNSFYLNIA 228
+L +L + +N + +P+ + L +++ E +L L N YLN+
Sbjct: 146 LSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204
Query: 229 GNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNS 288
P++ L LE L + GN + L L + + S N+
Sbjct: 205 MCNIK--DMPNLTPLVGLEELEMSGNH-FPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA 261
Query: 289 FSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
F ++LV L+L N S F+ L+ L L L N
Sbjct: 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 47/233 (20%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRH 760
+F N++G+GSF VYR GL VA+K+++ + + G + E + ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 761 RNLIKIITICSSIDSHGV--DFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
+++++ + D LV E NG + +L + S + H
Sbjct: 71 PSILEL---------YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-----FSENEARH 116
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA-------KFLYT-C 868
I + YLH H I+H DL SN+LL +M + DFGLA + YT C
Sbjct: 117 FMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC 173
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y++PE S + DV+S G + + I + P
Sbjct: 174 ---------------GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 51/244 (20%), Positives = 91/244 (37%), Gaps = 21/244 (8%)
Query: 376 QINMGRNQISGTIPSGIGNLVNLNG---FGIDLNQLTGTIPHEIGKLTNLQLLYLDF-NL 431
++ + +I I G ++ ++G ++ ++TGT P + + T L L+ N+
Sbjct: 72 RLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNV 131
Query: 432 LEGSIPFSLGNL-----TLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG--AL 484
+ L L L L + + + +L +L++S N G L
Sbjct: 132 SWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGL 191
Query: 485 PKQIFNITTLSL-YLDLSNNFLN---DSLPLEVGNLQNLVELDISRNQVSGEIPATL-SA 539
+ + +L L L N + L LD+S N + A
Sbjct: 192 ISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
+ L LNLS+ + +P L + + VLDLS N L P + L + L++ N
Sbjct: 252 PSQLNSLNLSFTGLKQ-VPKGLPA--KLSVLDLSYNRLDR-NPS-PDELPQVGNLSLKGN 306
Query: 600 HFEG 603
F
Sbjct: 307 PFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 96.9 bits (241), Expect = 6e-22
Identities = 54/303 (17%), Positives = 91/303 (30%), Gaps = 35/303 (11%)
Query: 280 NFSGPIPNSFS--------------NTSNLVMLDLNLNLFSGKVPI-NFSRLQNLSWLLL 324
NFS P P+ S +L L ++ + + + +L L +
Sbjct: 16 NFSDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTV 75
Query: 325 AGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQI 384
+ + L + S L L L G P + + + I RN
Sbjct: 76 RAARI---PSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVS 132
Query: 385 SGTIPSGIGNLVNLNGFG-----IDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFS 439
T + + L G I ++ L L L N G
Sbjct: 133 WATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192
Query: 440 ----LGNLTLLTELELQSNYLQ---GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNIT 492
L L L++ ++ G + L L++S N L A +
Sbjct: 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252
Query: 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNS 552
+ L+LS L +P + L LD+S N++ P+ + L+L N
Sbjct: 253 SQLNSLNLSFTGL-KQVPKGL--PAKLSVLDLSYNRLD-RNPSPDE-LPQVGNLSLKGNP 307
Query: 553 FRG 555
F
Sbjct: 308 FLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 4e-17
Identities = 41/240 (17%), Positives = 73/240 (30%), Gaps = 21/240 (8%)
Query: 404 DLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFS-LGNLTLLTELELQSNYLQGNIP 461
G E+ G +L+ L + F+ + L L +++ + I
Sbjct: 26 SAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRIL 85
Query: 462 SS---LGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL-YLDLSNN----FLNDSLPLEV 513
+ L L + ++TG P + T L L+L N L+
Sbjct: 86 FGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQ 145
Query: 514 GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL-------SLSSLKS 566
L L I++ + +L L+LS N G L +L+
Sbjct: 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQV 205
Query: 567 VKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVF---SNKTRISLSGNG 623
+ + + SG L+ L++S N S ++LS G
Sbjct: 206 LALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD-AAGAPSCDWPSQLNSLNLSFTG 264
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 2e-16
Identities = 46/269 (17%), Positives = 79/269 (29%), Gaps = 38/269 (14%)
Query: 73 RHQRVTKLYLRNQSIGGILSPH---VGNLSFLRLIDLADNNFYGNIPHEVGRLS--RLDT 127
+ + +L +R I + V +S L+ + L + G P + + L+
Sbjct: 66 KSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNI 125
Query: 128 LMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQ 187
L L N S++ L+ + L+ LSIA H
Sbjct: 126 LNLRNVSWAT-RDAWLAELQQWLK--------------------PGLKVLSIAQAHSLNF 164
Query: 188 LPASIGNLSVLKVINVEENRLSGRI-------PNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
+ L +++ +N G P L+ N SG
Sbjct: 165 SCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALA 224
Query: 241 YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
L+ L L N L + +L + ++ + L +LDL
Sbjct: 225 AARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP---AKLSVLDL 281
Query: 301 NLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
+ N P L + L L GN
Sbjct: 282 SYNRLDR-NPS-PDELPQVGNLSLKGNPF 308
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 74.2 bits (182), Expect = 3e-14
Identities = 48/274 (17%), Positives = 80/274 (29%), Gaps = 26/274 (9%)
Query: 177 LSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSF---YLNIAGNQFS 233
L D I LK + V R+ RI ++ L + + +
Sbjct: 49 LKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108
Query: 234 GNVPPSIYNLS--SLELLYLRGNRLIG---SLPIDIGLTLPKLTNFVIAENNFSGPIPNS 288
G PP + + L +L LR L P L IA+ +
Sbjct: 109 GTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168
Query: 289 FSNTSNLVMLDLNLNLFSGKVPINFS----RLQNLSWLLLAGNNLGNGAANDLDFITP-- 342
L LDL+ N G+ + + + L L L + +
Sbjct: 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM-----ETPSGVCSAL 223
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIG-NLVNLNGF 401
+L L L N + + +N+ + +P G+ L L+
Sbjct: 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLD-- 280
Query: 402 GIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGS 435
+ N+L P +L + L L N S
Sbjct: 281 -LSYNRLD-RNP-SPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 4e-13
Identities = 40/274 (14%), Positives = 66/274 (24%), Gaps = 35/274 (12%)
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFS---NTSNLVML 298
SLE L R + + L + I S L L
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 299 DLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSK--LIALGLYG 356
L +G P +L N+ A ++ L K L L +
Sbjct: 101 TLENLEVTGTAPPPLLEATGPDLNILNLRNVSW--ATRDAWLAELQQWLKPGLKVLSIAQ 158
Query: 357 NRFGGVLPHSIANLSTTTVQINMGRNQISGTI-------PSGIGNLVNLNGFGIDLNQLT 409
+ + +++ N G P L L + +
Sbjct: 159 AHSLNFSCEQVRVFPALST-LDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPS 217
Query: 410 GTIPHEIGKLTNLQLLYLDFNLLEGSIPFSL-GNLTLLTELELQSNYLQ---GNIPSSL- 464
G LQ L L N L + + L L L L+ +P+ L
Sbjct: 218 GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLPAKLS 277
Query: 465 ---------------GNCRSLLSLNVSQNKLTGA 483
+ +L++ N +
Sbjct: 278 VLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 42/237 (17%), Positives = 67/237 (28%), Gaps = 37/237 (15%)
Query: 31 SNETDRLALLAIKSQLHDPLGVTSSWNNSIN-LCQWTGVTCGHRHQRVTKLYLRNQSIGG 89
+ E A + L + + N S W + L +
Sbjct: 104 NLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLN 163
Query: 90 ILSPHVGNLSFLRLIDLADNNFYGNIPHE----VGRLSRLDTLMLANN---SFSGKIPTN 142
V L +DL+DN G + L L L N + SG
Sbjct: 164 FSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223
Query: 143 LSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVIN 202
+ L N+L A +L L+++ L Q+P + + L V++
Sbjct: 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL--PAKLSVLD 280
Query: 203 VEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGS 259
+ NRL PS L + L L+GN + S
Sbjct: 281 LSYNRLDR--------------------------NPSPDELPQVGNLSLKGNPFLDS 311
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 10/217 (4%)
Query: 387 TIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTL 445
+P GI + + N+++ NL +L+L N+L + L L
Sbjct: 25 AVPVGIPAASQRIF---LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81
Query: 446 LTELELQSNYLQGNIPSS-LGNCRSLLSLNVSQNKLTGALPKQIF-NITTLSLYLDLSNN 503
L +L+L N ++ + L +L++ + L L +F + L YL L +N
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAAL-QYLYLQDN 139
Query: 504 FLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLS 562
L +LP + +L NL L + N++S SL+ L L N P +
Sbjct: 140 ALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198
Query: 563 SLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
L + L L +NNLS + L L L+YL ++ N
Sbjct: 199 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 1e-21
Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 10/215 (4%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLY 426
+ + +I + N+IS +P+ NL + N L L L+ L
Sbjct: 28 VGIPAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 86
Query: 427 LDFNLLEGSIPFS-LGNLTLLTELELQSNYLQGNIPS-SLGNCRSLLSLNVSQNKLTGAL 484
L N S+ + L L L L LQ + +L L + N L AL
Sbjct: 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-AL 144
Query: 485 PKQIF-NITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTS 542
P F ++ L+ +L L N + S+P L +L L + +N+V+ P
Sbjct: 145 PDDTFRDLGNLT-HLFLHGNRI-SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 543 LEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
L L L N+ +L+ L++++ L L+ N
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPW 237
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 5e-18
Identities = 52/254 (20%), Positives = 85/254 (33%), Gaps = 42/254 (16%)
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
+ + ++P+ I + N S SF NL +L L+ N+ + F
Sbjct: 20 QQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF 76
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITP--LTNCSKLIALGLYGNRFGGVLPHSIANLS 371
+ L L L L+ N L + P +L L L
Sbjct: 77 TGLALLEQLDLSDNA-------QLRSVDPATFHGLGRLHTLHLD---------------- 113
Query: 372 TTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLYLDF 429
R + + G+ L L + N L +P + L NL L+L
Sbjct: 114 ---------RCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHG 162
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
N + + L L L L N + P + + L++L + N L+ ALP +
Sbjct: 163 NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEAL 221
Query: 490 NITTLSLYLDLSNN 503
YL L++N
Sbjct: 222 APLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 9/182 (4%)
Query: 446 LTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFL 505
+ L N + +S CR+L L + N L + F L LDLS+N
Sbjct: 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQ 92
Query: 506 NDSLPLEV-GNLQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLSS 563
S+ L L L + R + E+ +L+YL L N+ + +
Sbjct: 93 LRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151
Query: 564 LKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLS 620
L ++ L L N +S + L L+ L + N V F + R + L
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVH-PHAFRDLGRLMTLYLF 209
Query: 621 GN 622
N
Sbjct: 210 AN 211
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 13/209 (6%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
+ L+GNR V S T+ + + N ++ I + L L + N
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTI-LWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 411 TIPHEI-GKLTNLQLLYLDFNLLEGSIPF-SLGNLTLLTELELQSNYLQGNIPS-SLGNC 467
++ L L L+LD L+ + L L L LQ N LQ +P + +
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDL 152
Query: 468 RSLLSLNVSQNKLTGALPKQIF-NITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDIS 525
+L L + N+++ ++P++ F + +L L L N + + +L L+ L +
Sbjct: 153 GNLTHLFLHGNRIS-SVPERAFRGLHSLD-RLLLHQNRVA-HVHPHAFRDLGRLMTLYLF 209
Query: 526 RNQVSGEIPATLSACTSLEYLNLSYNSFR 554
N +S L+ +L+YL L+ N +
Sbjct: 210 ANNLSALPTEALAPLRALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 6e-14
Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 8/186 (4%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
+++ + N ++ AS L ++ + N L+ L L+++ N
Sbjct: 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93
Query: 234 GNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+V P+ + L L L+L + L + L L + +N ++F +
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCG-LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
NL L L+ N S F L +L LLL N + + + + +L+ L
Sbjct: 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR------DLGRLMTL 206
Query: 353 GLYGNR 358
L+ N
Sbjct: 207 YLFANN 212
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 8e-13
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 9/208 (4%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLMLANNSFS 136
+++L I + + L ++ L N I L+ L+ L L++N+
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVL-ARIDAAAFTGLALLEQLDLSDNAQL 93
Query: 137 GKIPTN-LSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASI-GN 194
+ G L L ++ + L+ L + DN L LP +
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRD 151
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY-NLSSLELLYLRG 253
L L + + NR+S L + L + N+ + +V P + +L L LYL
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFA 210
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNF 281
N L +LP + L L + +N +
Sbjct: 211 NNLS-ALPTEALAPLRALQYLRLNDNPW 237
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 2e-23
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 48/268 (17%)
Query: 335 NDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGN 394
+ I P ++ I L + L++ QI + I ++ GI
Sbjct: 9 TPIKQIFPDDAFAETIKDNLKKKSVTDAVT--QNELNSID-QIIANNSDIK-SV-QGIQY 63
Query: 395 LVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSN 454
L N+ ++ N+LT P + L NL L+LD N ++ + SL +L L L L+ N
Sbjct: 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHN 119
Query: 455 YLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG 514
+ +I + L + L SL + NK+T +IT LS
Sbjct: 120 GIS-DI-NGLVHLPQLESLYLGNNKIT--------DITVLS------------------- 150
Query: 515 NLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYN---SFRGGIPLSLSSLKSVKVLD 571
L L L + NQ+S +I L+ T L+ L LS N R L+ LK++ VL+
Sbjct: 151 RLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNHISDLRA-----LAGLKNLDVLE 203
Query: 572 LSSNNLSGQIPKYLENLSFLEYLNISSN 599
L S + + NL + +
Sbjct: 204 LFSQECLNKPINHQSNLVVPNTVKNTDG 231
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 96.3 bits (239), Expect = 1e-20
Identities = 47/290 (16%), Positives = 101/290 (34%), Gaps = 35/290 (12%)
Query: 312 NFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLS 371
L ++ + + + + + S+ +
Sbjct: 16 PDDAFAETIKDNLKKKSVTD--------AVTQNELNSIDQIIANNSDI-----KSVQGIQ 62
Query: 372 TTT--VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDF 429
++ + N+++ + NL NL +D N++ + L L+ L L+
Sbjct: 63 YLPNVTKLFLNGNKLTDI--KPLTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSLEH 118
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF 489
N + I L +L L L L +N + + L L +L++ N+++ +P +
Sbjct: 119 NGIS-DIN-GLVHLPQLESLYLGNNKIT--DITVLSRLTKLDTLSLEDNQISDIVP--LA 172
Query: 490 NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLS 549
+T L L LS N ++D L L+NL L++ + + S + +
Sbjct: 173 GLTKLQ-NLYLSKNHISDLRALA--GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNT 229
Query: 550 YNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
S +S D N+ +P++ +SF+ Y ++
Sbjct: 230 DGSLVTPEIIS-------DDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIG 272
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 92.1 bits (228), Expect = 3e-19
Identities = 56/347 (16%), Positives = 118/347 (34%), Gaps = 39/347 (11%)
Query: 289 FSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSK 348
+ + +L + V + L ++ ++ +++ + + +
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS--------VQGIQYLPN 66
Query: 349 LIALGLYGNRFGGVLPHSIANLSTTT--VQINMGRNQISGTIPSGIGNLVNLNGFGIDLN 406
+ L L GN+ I L+ + + N+I + S + +L L ++ N
Sbjct: 67 VTKLFLNGNKL-----TDIKPLTNLKNLGWLFLDENKIK-DL-SSLKDLKKLKSLSLEHN 119
Query: 407 QLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGN 466
++ I + L L+ LYL N + I L LT L L L+ N + +I L
Sbjct: 120 GIS-DING-LVHLPQLESLYLGNNKIT-DIT-VLSRLTKLDTLSLEDNQIS-DI-VPLAG 173
Query: 467 CRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISR 526
L +L +S+N ++ + + L L+L + + NL + +
Sbjct: 174 LTKLQNLYLSKNHISDLRA--LAGLKNLD-VLELFSQECLNKPINHQSNLVVPNTVKNTD 230
Query: 527 NQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV--LDLSSNNLSGQIPKY 584
+ P +S E N+ ++ +S + V + + Q K
Sbjct: 231 GSL--VTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKE 288
Query: 585 LENLSF-------LEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGK 624
+ +S+ + + K PTK + K + G
Sbjct: 289 VYTVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGH 335
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 81.3 bits (200), Expect = 6e-16
Identities = 50/268 (18%), Positives = 90/268 (33%), Gaps = 30/268 (11%)
Query: 216 LGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFV 275
+ N+ + V + L+S++ + + + I LP +T
Sbjct: 17 DDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQGIQ---YLPNVTKLF 71
Query: 276 IAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAAN 335
+ N + I +N NL L L+ N + + L+ L L L N + +
Sbjct: 72 LNGNKLTD-IKP-LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISD---- 123
Query: 336 DLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTT--VQINMGRNQISGTIPSGIG 393
I L + +L +L L N+ I LS T +++ NQIS I +
Sbjct: 124 ----INGLVHLPQLESLYLGNNKI-----TDITVLSRLTKLDTLSLEDNQIS-DI-VPLA 172
Query: 394 NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQS 453
L L + N ++ + + L NL +L L NL + ++
Sbjct: 173 GLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTD 230
Query: 454 NYLQGNIPSSLGNCRSLLSLNVSQNKLT 481
L P + + NV +
Sbjct: 231 GSLV--TPEIISDDGDYEKPNVKWHLPE 256
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 3e-09
Identities = 42/244 (17%), Positives = 91/244 (37%), Gaps = 18/244 (7%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
+ ++ N I + + L + + L N +I + L L L L N
Sbjct: 45 IDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKL-TDIK-PLTNLKNLGWLFLDENKIK 100
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
+ ++L L + N + + + +LE L + +N +T + L+
Sbjct: 101 -DL-SSLKDLKKLKSLSLEHNGI--SDINGLV-HLPQLESLYLGNNKITD--ITVLSRLT 153
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRL 256
L +++E+N++S I L L L ++ N S ++ + L +L++L L
Sbjct: 154 KLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNHIS-DLRA-LAGLKNLDVLELFSQE- 208
Query: 257 IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRL 316
+ PI+ L + + P S+ + ++ +L ++F
Sbjct: 209 CLNKPINHQSNLVVPNTVKNTDGSL--VTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFY 266
Query: 317 QNLS 320
Q ++
Sbjct: 267 QPVT 270
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-23
Identities = 51/239 (21%), Positives = 88/239 (36%), Gaps = 40/239 (16%)
Query: 706 FSTSNMIGQGSFG-FVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALR-NIRHRNL 763
+ ++G GS G V++G G VAVK + + E + L + H N+
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQ--GRPVAVKRML---IDFCDIALMEIKLLTESDDHPNV 71
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL-HHSNDQHDVCDLSLIQRLHIAIDIA 822
I+ CS F + E N +L++ + + ++ + + IA
Sbjct: 72 IRYY--CSETTD---RFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDH-------------DMVAHVGDFGLAKFLYTCQ 869
+ +LH IIH DLKP N+L+ ++ + DFGL K L
Sbjct: 126 SGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---D 179
Query: 870 VDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG-------DVYSFGILLLEMFIRKRP 921
++ GT G+ APE S D++S G + + + +
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-23
Identities = 60/271 (22%), Positives = 106/271 (39%), Gaps = 23/271 (8%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
+ L+ +++ N+I+ I + VNL + N + TI + L +L+ L
Sbjct: 48 SGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHL 105
Query: 426 YLDFNLLEGSIPFSL-GNLTLLTELELQSNYLQGNIPSSL-GNCRSLLSLNVSQNKLTGA 483
L +N L ++ S L+ LT L L N + +SL + L L V
Sbjct: 106 DLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK 164
Query: 484 LPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLSACTS 542
+ ++ F T L++ + L S + ++QN+ L + Q + + +S
Sbjct: 165 IQRKDFAGLTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSS 223
Query: 543 LEYLNLSYN--------SFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYL 594
+E L L G SL + + + ++ +L Q+ K L +S L L
Sbjct: 224 VECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLEL 282
Query: 595 NISSNHFEGKVPTKGVFSNK---TRISLSGN 622
S N + VP G+F +I L N
Sbjct: 283 EFSRNQLKS-VP-DGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-21
Identities = 56/282 (19%), Positives = 107/282 (37%), Gaps = 27/282 (9%)
Query: 309 VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIA 368
+P + + + L L+ N + + +DL C L AL L N + S +
Sbjct: 46 IPSGLT--EAVKSLDLSNNRITYISNSDLQ------RCVNLQALVLTSNGINTIEEDSFS 97
Query: 369 NLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI--GKLTNLQLL 425
+L + +++ N +S + S L +L + N T+ LT LQ+L
Sbjct: 98 SLGSLEH-LDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154
Query: 426 YLDFNLLEGSIPF-SLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
+ I LT L ELE+ ++ LQ P SL + +++ L + + L
Sbjct: 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LL 213
Query: 485 PKQIFNITTLSLYLDLSNNFLND----SLPLEV----GNLQNLVELDISRNQVSGEIPAT 536
+ ++T+ L+L + L+ L + I+ + ++
Sbjct: 214 LEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKL 272
Query: 537 LSACTSLEYLNLSYNSFRGGIPLS-LSSLKSVKVLDLSSNNL 577
L+ + L L S N + +P L S++ + L +N
Sbjct: 273 LNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 7e-20
Identities = 60/335 (17%), Positives = 110/335 (32%), Gaps = 41/335 (12%)
Query: 227 IAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIP 286
I + + + + L S+P + + + ++ N +
Sbjct: 14 IISLSKEESSNQASLSCDRNGICKGSSGSL-NSIPSGL---TEAVKSLDLSNNRITYISN 69
Query: 287 NSFSNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFITP--L 343
+ NL L L N + + + FS L +L L L+ N L N ++
Sbjct: 70 SDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSN--------LSSSWF 120
Query: 344 TNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFG 402
S L L L GN + + S+ + T + +G I L L
Sbjct: 121 KPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180
Query: 403 IDLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIP 461
ID + L + + + N+ L L + + + + LEL+ L
Sbjct: 181 IDASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHF 239
Query: 462 SSL--GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNL 519
S L G SL+ +N + +++ L + + + L
Sbjct: 240 SELSTGETNSLIKKFTFRN-------------------VKITDESLF-QVMKLLNQISGL 279
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLSYNSFR 554
+EL+ SRNQ+ TSL+ + L N +
Sbjct: 280 LELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 1e-18
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 10/202 (4%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG 465
L +IP + ++ L L N + L L L L SN + S
Sbjct: 41 GSLN-SIPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97
Query: 466 NCRSLLSLNVSQNKLTGALPKQIF-NITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELD 523
+ SL L++S N L+ L F +++L+ +L+L N + +L L L
Sbjct: 98 SLGSLEHLDLSYNYLS-NLSSSWFKPLSSLT-FLNLLGNPYKTLGETSLFSHLTKLQILR 155
Query: 524 ISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIP 582
+ +I + T LE L + + + P SL S+++V L L +
Sbjct: 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLL 214
Query: 583 KYL-ENLSFLEYLNISSNHFEG 603
+ + S +E L + +
Sbjct: 215 EIFVDVTSSVECLELRDTDLDT 236
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 2e-17
Identities = 44/271 (16%), Positives = 88/271 (32%), Gaps = 25/271 (9%)
Query: 224 YLNIAGNQFSGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFS 282
L+++ N+ + + S +L+ L L N I ++ D +L L + ++ N S
Sbjct: 56 SLDLSNNRIT-YISNSDLQRCVNLQALVLTSNG-INTIEEDSFSSLGSLEHLDLSYNYLS 113
Query: 283 GPIPNSFSNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFIT 341
+ F S+L L+L N + + FS L L L + + I
Sbjct: 114 NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT-------FTKIQ 166
Query: 342 P--LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNL 398
+ L L + + P S+ ++ + + + Q + ++
Sbjct: 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSH-LILHMKQHI-LLLEIFVDVTSSV 224
Query: 399 NGFGIDLNQLTGTIPHEI--------GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELE 450
+ L E+ K + + + L + L ++ L ELE
Sbjct: 225 ECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELE 283
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT 481
N L+ SL + + N
Sbjct: 284 FSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 7e-16
Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 33/263 (12%)
Query: 173 RLEKLSIADNHLTGQLPASI-GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQ 231
L+ L + N + + +L L+ +++ N LS + L + +LN+ GN
Sbjct: 77 NLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNP 135
Query: 232 FSGNVPPSIY-NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFS 290
+ S++ +L+ L++L + + L L I ++ P S
Sbjct: 136 YKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLK 195
Query: 291 NTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFIT--PLTNCSK 348
+ N+ L L++ + I ++ L L +L ++L L
Sbjct: 196 SIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFT 255
Query: 349 LIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQL 408
+ + + + + L NQL
Sbjct: 256 FRNVKITDESL--------------------------FQVMKLLNQISGLLELEFSRNQL 289
Query: 409 TGTIPHEI-GKLTNLQLLYLDFN 430
++P I +LT+LQ ++L N
Sbjct: 290 K-SVPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 52/267 (19%), Positives = 85/267 (31%), Gaps = 35/267 (13%)
Query: 72 HRHQRVTKLYLRNQSIGGILSPHV-GNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLM 129
R + L L + I + +L L +DL+ N N+ LS L L
Sbjct: 73 QRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYL-SNLSSSWFKPLSSLTFLN 130
Query: 130 LANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLP 189
L N + T+L + L GN K+
Sbjct: 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMD-------------TFTKIQ----------R 167
Query: 190 ASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY-NLSSLEL 248
L+ L+ + ++ + L P +L ++N +L + Q + SS+E
Sbjct: 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVEC 226
Query: 249 LYLRGNRL----IGSLPIDIGLTLPKLTNF--VIAENNFSGPIPNSFSNTSNLVMLDLNL 302
L LR L L +L K F V + + + S L+ L+ +
Sbjct: 227 LELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSR 286
Query: 303 NLFSGKVPINFSRLQNLSWLLLAGNNL 329
N F RL +L + L N
Sbjct: 287 NQLKSVPDGIFDRLTSLQKIWLHTNPW 313
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 4e-23
Identities = 51/232 (21%), Positives = 85/232 (36%), Gaps = 60/232 (25%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRH 760
+F +G+G FG VY + ++A+KVL L ++G E E ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 761 RNLIKIITICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
N++++ + F L+ E+ G L + L R
Sbjct: 74 PNILRM---------YNY-FHDRKRIYLMLEFAPRGELYKELQKH------------GRF 111
Query: 816 ------HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK-----F 864
++A A+ Y H +IH D+KP N+L+ + + DFG +
Sbjct: 112 DEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168
Query: 865 LYT-CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
T C GT+ Y+ PE G D++ G+L E
Sbjct: 169 RRTMC---------------GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 4e-23
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
+ST T +N+ NQI I +L +L + N + TI L NL L
Sbjct: 60 DGISTNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTL 117
Query: 426 YLDFNLLEGSIPF-SLGNLTLLTELELQSNYLQGNIPSSL-GNCRSLLSLNVSQ-NKLTG 482
L N L +IP + L+ L EL L++N ++ +IPS SL L++ + +L+
Sbjct: 118 ELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLS- 174
Query: 483 ALPKQIF-NITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACT 541
+ + F ++ L YL+L+ L +P + L L ELD+S N +S P +
Sbjct: 175 YISEGAFEGLSNLR-YLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLM 231
Query: 542 SLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
L+ L + + + + +L+S+ ++L+ NNL+ L LE +++ N
Sbjct: 232 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 3e-19
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 11/230 (4%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L+ N+ + +S +L + + + RN I TI G L NLN + N+LT
Sbjct: 69 LNLHENQIQIIKVNSFKHLRHLEI-LQLSRNHIR-TIEIGAFNGLANLNTLELFDNRLT- 125
Query: 411 TIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQS-NYLQGNIPSSLGNCR 468
TIP+ L+ L+ L+L N +E ++ + L L+L L +
Sbjct: 126 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 185
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRN 527
+L LN++ L +P + + L LDLS N L ++ L +L +L + ++
Sbjct: 186 NLRYLNLAMCNLR-EIP-NLTPLIKLD-ELDLSGNHL-SAIRPGSFQGLMHLQKLWMIQS 241
Query: 528 QVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
Q+ SL +NL++N+ + L ++ + L N
Sbjct: 242 QIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 6e-19
Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 45/275 (16%)
Query: 285 IPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITP-- 342
+P+ S +N +L+L+ N +F L++L L L+ N++ I
Sbjct: 58 VPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT--------IEIGA 107
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGF 401
+ L L L+ NR + + LS ++ + N I +IPS + +L
Sbjct: 108 FNGLANLNTLELFDNRLTTIPNGAFVYLSKLK-ELWLRNNPIE-SIPSYAFNRIPSLRRL 165
Query: 402 GI-DLNQLTGTIPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGN 459
+ +L +L+ I L+NL+ L L L IP +L L L EL+L N+L
Sbjct: 166 DLGELKRLS-YISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222
Query: 460 IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNL 519
P S L L + Q+++ + + F+ NLQ+L
Sbjct: 223 RPGSFQGLMHLQKLWMIQSQIQ-VIERNAFD------------------------NLQSL 257
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLSYNSFR 554
VE++++ N ++ + LE ++L +N +
Sbjct: 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 5e-17
Identities = 49/222 (22%), Positives = 83/222 (37%), Gaps = 38/222 (17%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG 465
L +P I TN +LL L N ++ S +L L L+L N+++ +
Sbjct: 53 KNLR-EVPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFN 109
Query: 466 NCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDIS 525
+L +L + N+LT +P F L L EL +
Sbjct: 110 GLANLNTLELFDNRLT-TIPNGAFV------------------------YLSKLKELWLR 144
Query: 526 RNQVSGEIPA-TLSACTSLEYLNLS-YNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK 583
N + IP+ + SL L+L + L +++ L+L+ NL +IP
Sbjct: 145 NNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201
Query: 584 YLENLSFLEYLNISSNHFEGKVPTKGVFSNKTR---ISLSGN 622
L L L+ L++S NH + G F + + +
Sbjct: 202 NLTPLIKLDELDLSGNHLS-AIR-PGSFQGLMHLQKLWMIQS 241
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-15
Identities = 55/273 (20%), Positives = 95/273 (34%), Gaps = 40/273 (14%)
Query: 68 VTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHE 118
V C ++ L L I I +L L ++ L+ N+ I
Sbjct: 48 VICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHI-RTIEIG 106
Query: 119 V-GRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKL 177
L+ L+TL L +N + IP L L++L
Sbjct: 107 AFNGLANLNTLELFDNRLT-TIPNGAF--VYLSK----------------------LKEL 141
Query: 178 SIADNHLTGQLPASIGNLSVLKVINV-EENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNV 236
+ +N + + + L+ +++ E RLS L N YLN+A
Sbjct: 142 WLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR--E 199
Query: 237 PPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLV 296
P++ L L+ L L GN + ++ L L + ++ N+F N +LV
Sbjct: 200 IPNLTPLIKLDELDLSGNH-LSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258
Query: 297 MLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
++L N + F+ L +L + L N
Sbjct: 259 EINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 2e-13
Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 18/239 (7%)
Query: 123 SRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADN 182
++ ++ + ++P +S +N H N + I N + LE L ++ N
Sbjct: 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRN 98
Query: 183 HLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI-Y 241
H+ + L+ L + + +NRL+ L L + N ++P
Sbjct: 99 HIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFN 157
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
+ SL L L + + + L L +A N IP + + L LDL+
Sbjct: 158 RIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLS 215
Query: 302 LNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITP--LTNCSKLIALGLYGNR 358
N S P +F L +L L + + + I N L+ + L N
Sbjct: 216 GNHLSAIRPGSFQGLMHLQKLWMIQSQ--------IQVIERNAFDNLQSLVEINLAHNN 266
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 1e-07
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 28/135 (20%)
Query: 468 RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRN 527
+ + L +P I T L+L N + +L++L L +SRN
Sbjct: 43 NQFSKVICVRKNLR-EVPDGISTNTR---LLNLHENQIQIIKVNSFKHLRHLEILQLSRN 98
Query: 528 QVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLEN 587
+ + +F G L ++ L+L N L+
Sbjct: 99 HIR----------------TIEIGAFNG--------LANLNTLELFDNRLTTIPNGAFVY 134
Query: 588 LSFLEYLNISSNHFE 602
LS L+ L + +N E
Sbjct: 135 LSKLKELWLRNNPIE 149
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 1e-22
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 30/214 (14%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
++ IGQG+ G VY + G VA++ +NL ++ + + E +R ++ N++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 766 IITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DI 821
+DS+ V + +V EY+ GSL DV + + IA +
Sbjct: 82 Y------LDSYLVGDELWVVMEYLAGGSLT----------DVVTETCMDEGQIAAVCREC 125
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A+E+LH + +IH D+K N+LL D + DFG Q+ ++ S+
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA-----QITPEQSKRST-- 175
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ GT ++APE D++S GI+ +EM
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 3e-22
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 40/246 (16%)
Query: 684 TSPMEQQFPIVSYAELSKA----------TGEFSTSNMIGQGSFGFVYRGILGEGGLLVA 733
T + Q +V++ + A + IG+GS G V G VA
Sbjct: 15 TENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVA 74
Query: 734 VKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA-LVYEYMQNGS 792
VK+++L ++ + E +R+ +H N++++ S+ V + ++ E++Q G+
Sbjct: 75 VKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM------YKSYLVGEELWVLMEFLQGGA 128
Query: 793 LEEWLHHSNDQHDVCDLSLIQRLHIAI---DIAYAIEYLHHHCQPPIIHGDLKPSNVLLD 849
L D+ + IA + A+ YLH +IH D+K ++LL
Sbjct: 129 LT----------DIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175
Query: 850 HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFG 909
D + DFG Q+ S + GT ++APE S + D++S G
Sbjct: 176 LDGRVKLSDFGFCA-----QISKDVPKRKS--LVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 910 ILLLEM 915
I+++EM
Sbjct: 229 IMVIEM 234
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 6e-22
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNLIKIITIC 770
IG G+ V VA+K +NL + + E +A+ H N++
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS----- 77
Query: 771 SSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DIAYAIE 826
S V + LV + + GS+ + + H + + L + IA ++ +E
Sbjct: 78 -YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES-TIATILREVLEGLE 135
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK--- 883
YLH + Q IH D+K N+LL D + DFG++ FL +
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLA-------TGGDITRNKVRKT 185
Query: 884 --GTVGYVAPE-----YGMGSEASMAGDVYSFGILLLEM 915
GT ++APE G +A D++SFGI +E+
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKA----DIWSFGITAIEL 220
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 9e-22
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 42/224 (18%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIKII 767
IG+G++G V++ E +VA+K + L +G S + E L+ ++H+N++++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN---DQHDVCDLSLIQRLHIAIDIAYA 824
+ H LV+E+ L+++ N D V L Q L
Sbjct: 68 DVL-----HSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSF-LFQLLK-------G 113
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF------LYTCQVDDVETPSS 878
+ + H ++H DLKP N+L++ + + +FGLA+ Y+ +V V
Sbjct: 114 LGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV--V----- 163
Query: 879 SIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
T+ Y P+ G++ S + D++S G + E+ RP
Sbjct: 164 ------TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 2e-21
Identities = 44/267 (16%), Positives = 96/267 (35%), Gaps = 50/267 (18%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF--KSFVAECEALRN 757
S+ T EF IG G FG V++ + G + A+K G+ ++ + E A
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 758 I-RHRNLIKIITICSSIDSHGVDFKALVY-EYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
+ +H ++++ + D L+ EY GSL + + + + ++
Sbjct: 67 LGQHSHVVRY------FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD- 119
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV------------------- 856
+ + + + Y+H ++H D+KPSN+ + + +
Sbjct: 120 -LLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKI 175
Query: 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEM 915
GD G ++ + +G ++A E + D+++ + ++
Sbjct: 176 GDLGHVT-----RISSPQV------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCA 224
Query: 916 FIRKRPTDSMFNDGLTIHEFAMKALPQ 942
+ +G HE LP+
Sbjct: 225 AGAEPL----PRNGDQWHEIRQGRLPR 247
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 3e-21
Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 44/224 (19%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRN 762
F ++G+GSF V A+K+L + ++ E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI----- 817
+K+ + D + F Y +NG L L I+++
Sbjct: 92 FVKLY--FTFQDDEKLYF---GLSYAKNGEL---------------LKYIRKIGSFDETC 131
Query: 818 ----AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVD 871
+I A+EYLH IIH DLKP N+LL+ DM H+ DFG AK +
Sbjct: 132 TRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDM--HIQITDFGTAK-----VLS 181
Query: 872 DVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ + GT YV+PE A + D+++ G ++ ++
Sbjct: 182 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 3e-21
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNL 763
+ + +G+G++ VY+G LVA+K + L +GA + + E L++++H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN---DQHDVCDLSLIQRLHIAID 820
+ + I H LV+EY+ L+++L + H+V L Q L
Sbjct: 63 VTLHDII-----HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLF-LFQLLR---- 111
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF------LYTCQVDDVE 874
+ Y H ++H DLKP N+L++ + DFGLA+ Y +V V
Sbjct: 112 ---GLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV--V- 162
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T+ Y P+ +GS S D++ G + EM +
Sbjct: 163 ----------TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 3e-21
Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 11/182 (6%)
Query: 419 LTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQN 478
L + + + LT + L + + ++ + + ++ L ++
Sbjct: 22 FKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINVT-DL-TGIEYAHNIKDLTINNI 76
Query: 479 KLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLS 538
T P I ++ L L + + + L +L LDIS + I ++
Sbjct: 77 HATNYNP--ISGLSNLE-RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133
Query: 539 ACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISS 598
+ ++LSYN I L +L +K L++ + + +E+ L L S
Sbjct: 134 TLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFS 190
Query: 599 NH 600
Sbjct: 191 QT 192
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-20
Identities = 34/196 (17%), Positives = 73/196 (37%), Gaps = 22/196 (11%)
Query: 342 PLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGF 401
P + + L + + + +L+ I + ++ +GI N+
Sbjct: 18 PDSTFKAYLNGLLGQSSTANITEAQMNSLTY----ITLANINVTDL--TGIEYAHNIKDL 71
Query: 402 GIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIP 461
I+ T P I L+NL+ L + + +L LT LT L++ + +I
Sbjct: 72 TINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSIL 129
Query: 462 SSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLS-----LYLDLSNNFLNDSLPLEVGNL 516
+ + + S+++S N I +I L L++ + ++D +E +
Sbjct: 130 TKINTLPKVNSIDLSYN-------GAITDIMPLKTLPELKSLNIQFDGVHDYRGIE--DF 180
Query: 517 QNLVELDISRNQVSGE 532
L +L + G+
Sbjct: 181 PKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-19
Identities = 26/165 (15%), Positives = 65/165 (39%), Gaps = 8/165 (4%)
Query: 415 EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLN 474
++ +L + L + + + + +L + + + N + + +L L
Sbjct: 39 TEAQMNSLTYITLANINVT-DLTG-IEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLR 94
Query: 475 VSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIP 534
+ +T + +T+L+ LD+S++ +DS+ ++ L + +D+S N +I
Sbjct: 95 IMGKDVTSDKIPNLSGLTSLT-LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM 153
Query: 535 ATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSG 579
L L+ LN+ ++ + + L S + G
Sbjct: 154 P-LKTLPELKSLNIQFDGVHDYRGIE--DFPKLNQLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 19/168 (11%)
Query: 438 FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL- 496
L + + SL + ++ +T ++T +
Sbjct: 17 IPDSTFKAYLNGLLGQS---STANITEAQMNSLTYITLANINVT--------DLTGIEYA 65
Query: 497 ----YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNS 552
L ++N + P+ L NL L I V+ + LS TSL L++S+++
Sbjct: 66 HNIKDLTINNIHATNYNPIS--GLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA 123
Query: 553 FRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNH 600
I +++L V +DLS N I L+ L L+ LNI +
Sbjct: 124 HDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDG 170
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 9e-15
Identities = 27/194 (13%), Positives = 64/194 (32%), Gaps = 14/194 (7%)
Query: 261 PIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLS 320
++ + ++ S + + ++L + L + I N+
Sbjct: 12 QDNVNIPDSTFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGI--EYAHNIK 69
Query: 321 WLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMG 380
L + + N P++ S L L + G +++ L++ T +++
Sbjct: 70 DLTINNIHATN--------YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT-LLDIS 120
Query: 381 RNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSL 440
+ +I + I L +N + N I + L L+ L + F+ +
Sbjct: 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIE- 178
Query: 441 GNLTLLTELELQSN 454
+ L +L S
Sbjct: 179 -DFPKLNQLYAFSQ 191
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-11
Identities = 27/172 (15%), Positives = 60/172 (34%), Gaps = 15/172 (8%)
Query: 215 TLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNF 274
T Q+ + Y+ +A + ++ I +++ L + PI L L
Sbjct: 39 TEAQMNSLTYITLANINVT-DLTG-IEYAHNIKDLTINNIHATNYNPIS---GLSNLERL 93
Query: 275 VIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAA 334
I + + + S ++L +LD++ + + + L ++ + L+ N
Sbjct: 94 RIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA----- 148
Query: 335 NDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISG 386
+ I PL +L +L + + I + Q+ I G
Sbjct: 149 --ITDIMPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLN-QLYAFSQTIGG 195
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 7e-11
Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 14/189 (7%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
+ + + ++ L I + ++ + + N L I +
Sbjct: 22 FKAYLNGLLGQSSTANITEAQMNSLTYITLANINVT-DLTG-IEYAHNIKDLTINNIHAT 79
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
N P I LS+LE L + G + ++ L LT I+ + I +
Sbjct: 80 -NYNP-ISGLSNLERLRIMGKDVTSDKIPNLS-GLTSLTLLDISHSAHDDSILTKINTLP 136
Query: 294 NLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALG 353
+ +DL+ N + L L L + + + + + + KL L
Sbjct: 137 KVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD--------YRGIEDFPKLNQLY 187
Query: 354 LYGNRFGGV 362
+ GG
Sbjct: 188 AFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 6/133 (4%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSG 137
L + N + LS L + + + + + L+ L L +++++
Sbjct: 69 KDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDD 126
Query: 138 KIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV 197
I T ++ + + N + I L+ L+I + + I +
Sbjct: 127 SILTKINTLPKVNSIDLSYNGAITDIMPLK--TLPELKSLNIQFDGVHDYRG--IEDFPK 182
Query: 198 LKVINVEENRLSG 210
L + + G
Sbjct: 183 LNQLYAFSQTIGG 195
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 4e-21
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 30/218 (13%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G++ VY+G+ G+ VA+K + L + +G + + E ++ ++H N++++
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ H + LV+E+M N L++++ + L L + + + +
Sbjct: 71 VI-----HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF------LYTCQVDDVETPSSSIGI 882
H + I+H DLKP N+L++ +GDFGLA+ ++ +V V
Sbjct: 125 HENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV--V--------- 170
Query: 883 KGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T+ Y AP+ MGS S + D++S G +L EM K
Sbjct: 171 --TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 6e-21
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEALRNIRHRNL 763
+F + +G G+ G V++ GL++A K+++L K A + E + L +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 764 IKIITICSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ +G + + E+M GSL++ L + + ++I
Sbjct: 94 VG---------FYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSI 138
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
+ + YL + I+H D+KPSN+L++ + DFG++ L +++ ++S
Sbjct: 139 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-------IDSMANS 189
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y++PE G+ S+ D++S G+ L+EM + + P
Sbjct: 190 --FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 7e-21
Identities = 55/277 (19%), Positives = 91/277 (32%), Gaps = 59/277 (21%)
Query: 679 HKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN 738
H SS + L + ++ IGQGS+G V I + + A+K++N
Sbjct: 6 HHSSGRENL-----YFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60
Query: 739 LTR-----KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSL 793
+ + E ++ + H N+ ++ + LV E G L
Sbjct: 61 KNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC-----LVMELCHGGHL 115
Query: 794 EEWLHHSNDQHDVCDLSLIQRL----------------------------------HIAI 819
+ L+ D + + +I
Sbjct: 116 LDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPS 877
I A+ YLH+ I H D+KP N L + + DFGL+K Y + +
Sbjct: 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
Query: 878 SSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGILL 912
+ GT +VAPE D +S G+LL
Sbjct: 233 TKA---GTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 1e-20
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 19/239 (7%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAF 745
M +Q+ V + + ++ IGQG+FG V++ + G VA+K + + K F
Sbjct: 1 MAKQYDSVECPFCDEVS-KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 746 KSF-VAECEALRNIRHRNLIKIITICSSIDSHGVDFKA---LVYEYMQNGSLEEWLHHSN 801
+ E + L+ ++H N++ +I IC + S K LV+++ ++ L L +
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVL 118
Query: 802 DQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861
+ +L + + + + Y+H + I+H D+K +NVL+ D V + DFGL
Sbjct: 119 VK-----FTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170
Query: 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
A+ ++ + ++ + T+ Y PE +G D++ G ++ EM+ R
Sbjct: 171 ARA-FSLAKNSQPNRYTNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECE-ALRNIRHRN 762
+ +G+G++G V + G ++AVK + T K + + + ++R +
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 67
Query: 763 LIKIITICSSIDSHGVDFK----ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
+ +G F+ + E M + SL+++ D+ ++ IA
Sbjct: 68 TVT---------FYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILG--KIA 115
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ I A+E+LH +IH D+KPSNVL++ + DFG++ +L V+ +
Sbjct: 116 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL-------VDDVAK 166
Query: 879 SIGIKGTVGYVAPE----YGMGSEASMAGDVYSFGILLLEM 915
I G Y+APE S+ D++S GI ++E+
Sbjct: 167 DIDA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-20
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 49/230 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVA------------------ 750
IG+GS+G V A+KVL+ L R+ F
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 751 -----ECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHD 805
E L+ + H N++K++ + +D D +V+E + G + E D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 806 VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
D+ IEYLH+ IIH D+KPSN+L+ D + DFG++
Sbjct: 138 QA-------RFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG---DVYSFGILL 912
+ D ++ GT ++APE + +G DV++ G+ L
Sbjct: 188 ---KGSDALLSNTV----GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 2e-20
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 38/225 (16%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNI---------R 759
IG G++G VY+ G VA+K + + G +R +
Sbjct: 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGL--PISTVREVALLRRLEAFE 72
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
H N+++++ +C++ + LV+E++ L +L + I+ L
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG--LPAETIKDL--MR 127
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----YTCQVDDVE 874
+++LH +C I+H DLKP N+L+ + DFGLA+ T V V
Sbjct: 128 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV--V- 181
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
T+ Y APE + S + D++S G + EMF RK
Sbjct: 182 ----------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 2e-20
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 20/219 (9%)
Query: 382 NQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLG 441
I+ P L N + +T + +L+ +Q D + ++ S+ +
Sbjct: 7 TPINQVFP--DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQ-SLA-GMQ 60
Query: 442 NLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL-YLDL 500
T L EL L N + ++ S L + L L+V++N+L + I + L L L
Sbjct: 61 FFTNLKELHLSHNQIS-DL-SPLKDLTKLEELSVNRNRLK-----NLNGIPSACLSRLFL 113
Query: 501 SNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLS 560
NN L D+ L +L+NL L I N++ I L + LE L+L N L+
Sbjct: 114 DNNELRDTDSLI--HLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEITNTGGLT 169
Query: 561 LSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
LK V +DL+ + KY L +
Sbjct: 170 --RLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDG 206
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 5e-14
Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 19/187 (10%)
Query: 438 FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLS-- 495
F L + L + S + + N + + + + +
Sbjct: 13 FPDPGLANAVKQNLGKQSV--TDLVSQKELSGVQNFNGDNSNIQ-----SLAGMQFFTNL 65
Query: 496 LYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRG 555
L LS+N ++D PL+ +L L EL ++RN++ + L L L N R
Sbjct: 66 KELHLSHNQISDLSPLK--DLTKLEELSVNRNRLK-NLNG--IPSACLSRLFLDNNELRD 120
Query: 556 GIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKT 615
L LK++++L + +N L + L LS LE L++ N
Sbjct: 121 TDSLI--HLKNLEILSIRNNKLKSIVM--LGFLSKLEVLDLHGNEITNTGGLTR-LKKVN 175
Query: 616 RISLSGN 622
I L+G
Sbjct: 176 WIDLTGQ 182
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 1e-11
Identities = 35/242 (14%), Positives = 81/242 (33%), Gaps = 27/242 (11%)
Query: 268 LPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGN 327
L + + + + + S + + + + + NL L L+ N
Sbjct: 18 LANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNI--QSLAGMQFFTNLKELHLSHN 73
Query: 328 NLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQ-INMGRNQISG 386
+ + ++PL + +KL L + NR ++ + + + + + N++
Sbjct: 74 QISD--------LSPLKDLTKLEELSVNRNRL-----KNLNGIPSACLSRLFLDNNELRD 120
Query: 387 TIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLL 446
T + +L NL I N+L +I +G L+ L++L L N + + L L +
Sbjct: 121 T--DSLIHLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHGNEIT-NTG-GLTRLKKV 174
Query: 447 TELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
++L ++ + P I N + +
Sbjct: 175 NWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWIS--PYYISNGGSYV-DGCVLWELPV 231
Query: 507 DS 508
+
Sbjct: 232 YT 233
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 500 LSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL 559
+N P L N V+ ++ + V+ + + ++ N ++ + +
Sbjct: 4 QRPTPINQVFPDP--GLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAGM 59
Query: 560 SLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNH 600
++K L LS N +S + L++L+ LE L+++ N
Sbjct: 60 Q--FFTNLKELHLSHNQIS-DL-SPLKDLTKLEELSVNRNR 96
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 17/198 (8%)
Query: 122 LSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIAD 181
L+ L S + + S + NF +N+ Q A + + L++L ++
Sbjct: 18 LANAVKQNLGKQSVTD--LVSQKELSGVQNFNGDNSNI--QSLAGMQFFT-NLKELHLSH 72
Query: 182 NHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY 241
N ++ + + +L+ L+ ++V NRL L L + N+ S+
Sbjct: 73 NQISD--LSPLKDLTKLEELSVNRNRLKNLNGIPSACLS---RLFLDNNELRD--TDSLI 125
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
+L +LE+L +R N+L + + L KL + N + + + +DL
Sbjct: 126 HLKNLEILSIRNNKLKSIVMLG---FLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDLT 180
Query: 302 LNLFSGKVPINFSRLQNL 319
+ L
Sbjct: 181 GQKCVNEPVKYQPELYIT 198
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 92.3 bits (229), Expect = 6e-20
Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 40/221 (18%)
Query: 712 IGQG--SFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKII 767
IG+G V G V V+ +NL E + H N++
Sbjct: 33 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYR 92
Query: 768 TICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL---HIAI---D 820
+ D + +V +M GS D+ + + IA
Sbjct: 93 A------TFIADNELWVVTSFMAYGSA----------KDLICTHFMDGMNELAIAYILQG 136
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+ A++Y+HH +H +K S++L+ D ++ + +
Sbjct: 137 VLKALDYIHHMGY---VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 193
Query: 881 GIKGTVGYVAPE------YGMGSEASMAGDVYSFGILLLEM 915
+ +++PE G +++ D+YS GI E+
Sbjct: 194 YSVKVLPWLSPEVLQQNLQGYDAKS----DIYSVGITACEL 230
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 6e-20
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 43/222 (19%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G++G VY+ G +VA+K + L +G + + E L+ + H N++ +I
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN---DQHDVCDLSLIQRLHIAIDIAYA 824
+ H LV+E+M+ L++ L + + L Q L
Sbjct: 86 DVI-----HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIY-LYQLLR-------G 131
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF------LYTCQVDDVETPSS 878
+ + H H I+H DLKP N+L++ D + DFGLA+ YT +V V
Sbjct: 132 VAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV--V----- 181
Query: 879 SIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T+ Y AP+ MGS+ S + D++S G + EM K
Sbjct: 182 ------TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 6e-20
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 375 VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEG 434
++ N+ + ++ + L +++ + + + ++ I L N+ L+L+ N L
Sbjct: 27 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLT- 81
Query: 435 SIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTL 494
I L NL L L L N ++ ++ SSL + + L SL++ N ++ I + L
Sbjct: 82 DI-KPLANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNGIS-----DINGLVHL 133
Query: 495 SL--YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNS 552
L L NN + D L L L L + NQ+S +I L+ T L+ L LS N
Sbjct: 134 PQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKNH 189
Query: 553 FRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
L+ LK++ VL+L S + + NL + +
Sbjct: 190 ISDLRALA--GLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDG 234
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 3e-18
Identities = 52/322 (16%), Positives = 109/322 (33%), Gaps = 63/322 (19%)
Query: 290 SNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKL 349
+ + +L + + + L ++ ++ +++ + + + +
Sbjct: 21 DAFAETIKDNLKKKSVTD--AVTQNELNSIDQIIANNSDIKS--------VQGIQYLPNV 70
Query: 350 IALGLYGNRFGGVLPHSIANLSTTT--VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQ 407
L L GN+ I L+ + + N++ + S + +L L ++ N
Sbjct: 71 TKLFLNGNKL-----TDIKPLANLKNLGWLFLDENKVK-DL-SSLKDLKKLKSLSLEHNG 123
Query: 408 LTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNC 467
++ I + L L+ LYL N + I L LT L L L+ N + S +
Sbjct: 124 IS-DING-LVHLPQLESLYLGNNKIT-DIT-VLSRLTKLDTLSLEDNQI-----SDIVPL 174
Query: 468 RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRN 527
L L L LS N ++D L L+NL L++
Sbjct: 175 AGLTKLQ----------------------NLYLSKNHISDLRALA--GLKNLDVLELFSQ 210
Query: 528 QVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLEN 587
+ + S + + S ++ + D N+ +P++
Sbjct: 211 ECLNKPINHQSNLVVPNTVKNTDGS-----LVTPEIISDDG--DYEKPNVKWHLPEFTNE 263
Query: 588 LSFLEYLNISSNH----FEGKV 605
+SF+ Y ++ F G+V
Sbjct: 264 VSFIFYQPVTIGKAKARFHGRV 285
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-07
Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 42/253 (16%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFS 136
K L+ +S+ L+ + I +++ ++ + L + L L N
Sbjct: 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDI-KSVQ-GIQYLPNVTKLFLNGN--- 78
Query: 137 GKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLS 196
K+ T++ +NL N L L + +N + L S+ +L
Sbjct: 79 -KL-TDIKPLANLKN----------------------LGWLFLDENKVK-DLS-SLKDLK 112
Query: 197 VLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRL 256
LK +++E N +S I L L L + N+ + ++ + L+ L+ L L N++
Sbjct: 113 KLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQI 168
Query: 257 IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRL 316
+P+ L KL N +++N+ S + + NL +L+L K + S L
Sbjct: 169 SDIVPLA---GLTKLQNLYLSKNHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNL 223
Query: 317 QNLSWLLLAGNNL 329
+ + +L
Sbjct: 224 VVPNTVKNTDGSL 236
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 6e-20
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHR 761
G F ++G G++G VY+G + G L A+KV+++T + E L+ HR
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHR 81
Query: 762 NLIKIITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI- 819
N+ + G+D + LV E+ GS+ + + ++ ++ IA
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-------TLKEEWIAYI 134
Query: 820 --DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+I + +LH H +IH D+K NVLL + + DFG++ L
Sbjct: 135 CREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQL-----------D 180
Query: 878 SSIGIKGT-VG---YVAPEYGMGSEASMAG-----DVYSFGILLLEM 915
++G + T +G ++APE E A D++S GI +EM
Sbjct: 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 7e-20
Identities = 55/216 (25%), Positives = 85/216 (39%), Gaps = 46/216 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+F V+ G L A+K + + S E L+ I+H N++ + I
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDIAY 823
S + LV + + G L + +++R + +
Sbjct: 77 STTHY-----YLVMQLVSGGELFDR--------------ILERGVYTEKDASLVIQQVLS 117
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
A++YLH + I+H DLKP N+L + + + DFGL+K E
Sbjct: 118 AVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---------EQNGIMS 165
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
GT GYVAPE S A D +S G ILL
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 8e-20
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECE-ALRNIRHRNLIKIITI 769
IG+G++G V + + G ++AVK + T K + + + +R+ +++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQ---- 85
Query: 770 CSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHS-NDQHDVCDLSLIQRLHIAIDIAYA 824
+G F+ + E M + S +++ + + DV ++ I + A
Sbjct: 86 -----FYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG--KITLATVKA 137
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ +L + + IIH D+KPSN+LLD + DFG++ L SI
Sbjct: 138 LNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL-----------VDSIAKTR 184
Query: 885 TVG---YVAPE----YGMGSEASMAGDVYSFGILLLEM 915
G Y+APE + DV+S GI L E+
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 8e-20
Identities = 52/248 (20%), Positives = 91/248 (36%), Gaps = 57/248 (22%)
Query: 691 FPIVSYAELSKATGEFS----TSNMIGQGSFGFVYRGILGEGGLLVAVKVLN-------- 738
F ++ + S S +G G+ G V + VA+++++
Sbjct: 118 FFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS 177
Query: 739 LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH 798
+ E E L+ + H +IKI + D + +V E M+ G L +
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDK-- 229
Query: 799 HSNDQHDVCDLSLIQRLH--------IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL-- 848
++ + A++YLH + IIH DLKP NVLL
Sbjct: 230 ------------VVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSS 274
Query: 849 -DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG---D 904
+ D + + DFG +K + + + GT Y+APE + + D
Sbjct: 275 QEEDCLIKITDFGHSKI-----LGETSLMRTLC---GTPTYLAPEVLVSVGTAGYNRAVD 326
Query: 905 VYSFGILL 912
+S G++L
Sbjct: 327 CWSLGVIL 334
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-19
Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 51/217 (23%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHRNLIKIITI 769
IG+G+F V G VA+K+++ T+ + E ++ + H N++K+ +
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL------HIAIDIAY 823
I++ + L+ EY G + ++L R+ I
Sbjct: 83 ---IETEKTLY--LIMEYASGGEVFDYLVAH------------GRMKEKEARSKFRQIVS 125
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA------KFLYT-CQVDDVETP 876
A++Y H I+H DLK N+LLD DM + DFG + L C
Sbjct: 126 AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC-------- 174
Query: 877 SSSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILL 912
G Y APE G + DV+S G++L
Sbjct: 175 -------GAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 1e-19
Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 25/204 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG V+R + G + K +N + E + + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
L+ E++ G L + + + + ++ R ++++H H
Sbjct: 119 DKYEM-----VLILEFLSGGELFDRIAAEDYKMSEAEVINYMR-----QACEGLKHMHEH 168
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIK-GTVGY 888
I+H D+KP N++ + + V DFGLA L P + + T +
Sbjct: 169 ---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL---------NPDEIVKVTTATAEF 216
Query: 889 VAPEYGMGSEASMAGDVYSFGILL 912
APE D+++ G+L
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLG 240
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 1e-19
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 31/209 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIITIC 770
IG+GSFG V++GI +VA+K+++L + + E L + K
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK----- 84
Query: 771 SSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DIAYAIE 826
S+ D K ++ EY+ GS + L + IA +I ++
Sbjct: 85 -YYGSYLKDTKLWIIMEYLGGGSALDLLEP----------GPLDETQIATILREILKGLD 133
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
YLH IH D+K +NVLL + DFG+A L +T GT
Sbjct: 134 YLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL-------TDTQIKRNTFVGTP 183
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEM 915
++APE S D++S GI +E+
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIEL 212
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 1e-19
Identities = 57/232 (24%), Positives = 87/232 (37%), Gaps = 58/232 (25%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN--------LTRKGAFKSFVAECEAL 755
++ST + +G G+FGFV+ + E V VK + E L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 756 RNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGS-LEEWL-HHSNDQHDVCDLSLIQ 813
+ H N+IK++ I ++ G LV E +G L ++ H + Q
Sbjct: 84 SRVEHANIIKVLDI---FENQGFFQ--LVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 814 RLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA------KFLYT 867
+ A+ YL IIH D+K N+++ D + DFG A K YT
Sbjct: 139 -------LVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 868 -CQVDDVETPSSSIGIKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
C GT+ Y APE Y G E +++S G+ L
Sbjct: 189 FC---------------GTIEYCAPEVLMGNPYR-GPEL----EMWSLGVTL 220
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 45/215 (20%), Positives = 82/215 (38%), Gaps = 36/215 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA-FKSFVAECEAL-RNIRHRNLIKIITI 769
+G G+ G V++ + G ++AVK + + K + + + + ++ +++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQ---- 88
Query: 770 CSSIDSHGVDFKA----LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
G + E M E+ L + + I A+
Sbjct: 89 -----CFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILG-----KMTVAIVKAL 137
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
YL +IH D+KPSN+LLD + DFG++ L V+ + G
Sbjct: 138 YYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL-------VDDKAKDRSA-GC 187
Query: 886 VGYVAPE-----YGMGSEASMAGDVYSFGILLLEM 915
Y+APE + + DV+S GI L+E+
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-19
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVA-ECEALRNIRHRNLIK-- 765
+G+GS+G V + E AVK+L L R ++ V E + LR +RH+N+I+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 766 -IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ + +V EY G E + S + + Q +
Sbjct: 73 DVLYNEEKQKMY------MVMEYCVCGMQE--MLDSVPEKR---FPVCQAHGYFCQLIDG 121
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV-ETPSSSIGIK 883
+EYLH I+H D+KP N+LL + G+A+ L+ DD T
Sbjct: 122 LEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ------ 172
Query: 884 GTVGYVAPEYGMGSE--ASMAGDVYSFGILL 912
G+ + PE G + + D++S G+ L
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 42/244 (17%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
+ +G G+FG VY+ E G L A KV+ + + ++ E E L H ++K
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 766 IITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DI 821
+ + ++ D K ++ E+ G+++ + + + I + +
Sbjct: 81 L------LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG--------LTEPQIQVVCRQM 126
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A+ +LH IIH DLK NVL+ + + DFG++ + S
Sbjct: 127 LEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDS-- 176
Query: 882 IKGTVGYVAPEYGMGSEASMAG-----DVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFA 936
GT ++APE M D++S GI L+EM + P ++
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP---HHE----LN--P 227
Query: 937 MKAL 940
M+ L
Sbjct: 228 MRVL 231
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 2e-19
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 56/233 (24%)
Query: 710 NMIGQGSFGFVYRGI-LGEGGLLVAVKVLNLTRKGAFKSFVAECE-----ALRNI----- 758
IG+G++G V++ L GG VA+K + + E +R +
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT---------GEEGMPLSTIREVAVLRH 67
Query: 759 ----RHRNLIKIITICSSIDSHGVDFKALVYEYMQN---GSLEEWLHHSNDQHDVCDLSL 811
H N++++ +C+ + LV+E++ L++ + D+ +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM-M 126
Query: 812 IQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL-----Y 866
Q L +++LH H ++H DLKP N+L+ + DFGLA+
Sbjct: 127 FQLLR-------GLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
T V V T+ Y APE + S + D++S G + EMF RK
Sbjct: 177 TSVV--V-----------TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 57/261 (21%)
Query: 679 HKSSVTSPMEQQFPIVSYAELSKATGEFST----SNMIGQGSFGFVYRGILGEGGLLVAV 734
H S + Q I + K G+ +G G++G V G A+
Sbjct: 7 HSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAI 66
Query: 735 KVLNLTR-------------KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFK 781
KV+ ++ + + E L+++ H N+IK+ + D
Sbjct: 67 KVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE--DKKYF--- 121
Query: 782 ALVYEYMQNGSLEEWL--HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHG 839
LV E+ + G L E + H D+ D + I I I YLH H I+H
Sbjct: 122 YLVTEFYEGGELFEQIINRHKFDECDAAN--------IMKQILSGICYLHKHN---IVHR 170
Query: 840 DLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE---- 892
D+KP N+LL + + + DFGL+ F + GT Y+APE
Sbjct: 171 DIKPENILLENKNSLLNIKIVDFGLSSF-----FSKDYKLRDRL---GTAYYIAPEVLKK 222
Query: 893 -YGMGSEASMAGDVYSFGILL 912
Y DV+S G+++
Sbjct: 223 KYNEKC------DVWSCGVIM 237
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 2e-19
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
F +G+GS+G VY+ I E G +VA+K + + + + E ++ +++K
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 766 IITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI---DI 821
S+ + +V EY GS+ + + N + IA
Sbjct: 89 Y------YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--------LTEDEIATILQST 134
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+EYLH IH D+K N+LL+ + A + DFG+A Q+ D ++
Sbjct: 135 LKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAG-----QLTDTMAKRNT-- 184
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ GT ++APE + D++S GI +EM
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 3e-19
Identities = 60/245 (24%), Positives = 91/245 (37%), Gaps = 47/245 (19%)
Query: 685 SPMEQQFPIVSYAELSKATGEFST----SNMIGQGSFGFVYRGILGEGGLLVAVKVLN-- 738
M + +T FS ++G+GSFG V G AVKV++
Sbjct: 3 GSMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 62
Query: 739 -LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL 797
+ +K +S + E + L+ + H N++K+ D LV E G L + +
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE--DKGYF---YLVGEVYTGGELFDEI 117
Query: 798 --HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDM 852
+ D I + I Y+H + I+H DLKP N+LL D
Sbjct: 118 ISRKRFSEVDAAR--------IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDA 166
Query: 853 VAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE-----YGMGSEASMAGDVYS 907
+ DFGL+ E GT Y+APE Y DV+S
Sbjct: 167 NIRIIDFGLSTH--------FEASKKMKDKIGTAYYIAPEVLHGTYDEKC------DVWS 212
Query: 908 FGILL 912
G++L
Sbjct: 213 TGVIL 217
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 3e-19
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 42/224 (18%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIKII 767
+G+G++G VY+ I VA+K + L +G + + E L+ ++HRN+I++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
++ H L++EY +N L++++ D++ + +I+ + + +
Sbjct: 100 SVI-----HHNHRLHLIFEYAEN-DLKKYM----DKNPDVSMRVIKSF--LYQLINGVNF 147
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVG-----DFGLAKF------LYTCQVDDVETP 876
H +H DLKP N+LL + DFGLA+ +T ++ +
Sbjct: 148 CHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI--I--- 199
Query: 877 SSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T+ Y PE +GS S + D++S + EM ++
Sbjct: 200 --------TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 3e-19
Identities = 52/230 (22%), Positives = 88/230 (38%), Gaps = 53/230 (23%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN--------LTRKGAFKSFVAECEALR 756
E+ S +G G+ G V + VA+K+++ + E E L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 757 NIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
+ H +IKI + D + +V E M+ G L + + +
Sbjct: 71 KLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKV--------------VGNKR 110
Query: 817 --------IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFL 865
+ A++YLH + IIH DLKP NVLL + D + + DFG +K
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 166
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG---DVYSFGILL 912
+ + + GT Y+APE + + D +S G++L
Sbjct: 167 ----LGETSLMRTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 3e-19
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 45/225 (20%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA-----ECEALRNIRHRNLI 764
+ +G+G F VY+ +VA+K + L + K + E + L+ + H N+I
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN---DQHDVCDLSLIQRLHIAIDI 821
++ + +LV+++M+ LE + ++ + ++ L
Sbjct: 76 GLLDAFGHKSN-----ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAY-MLMTLQ----- 123
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVET 875
+EYLH H I+H DLKP+N+LLD + V + DFGLAK YT QV V
Sbjct: 124 --GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV--V-- 174
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T Y APE G+ + D+++ G +L E+ +R
Sbjct: 175 ---------TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 4e-19
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLI 764
F +G G+FG V+ GL +K +N R + + AE E L+++ H N+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
KI + + +V E + G L E + + + LS + + A
Sbjct: 84 KIFEVFEDYHNM-----YIVMETCEGGELLERIVSAQARGKA--LSEGYVAELMKQMMNA 136
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
+ Y H ++H DLKP N+L + DFGLA+ E +++
Sbjct: 137 LAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL-----FKSDEHSTNAA- 187
Query: 882 IKGTVGYVAPE---YGMGSEASMAGDVYSFGILL 912
GT Y+APE + + D++S G+++
Sbjct: 188 --GTALYMAPEVFKRDVTFKC----DIWSAGVVM 215
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 4e-19
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 43/228 (18%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKGAFKSFVAECEALRNIRHRNLI 764
++ + +IG GSFG VY+ L + G LVA+K VL R FK+ E + +R + H N++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKN--RELQIMRKLDHCNIV 110
Query: 765 KII-TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
++ SS + + LV +Y+ ++ H + + ++ Y
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL------YMY 163
Query: 824 ----AIEYLHHHCQPPIIHGDLKPSNVLLDHDM-VAHVGDFGLAKFLYTCQVDDVETPSS 878
++ Y+H I H D+KP N+LLD D V + DFG AK L V +
Sbjct: 164 QLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------VRGEPN 213
Query: 879 SIGIKGTVGYV------APEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
V Y+ APE G+ + + + DV+S G +L E+ + +
Sbjct: 214 -------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 4e-19
Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 42/229 (18%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRN 762
+ +G G++G V + A+K++ T + + E L+ + H N
Sbjct: 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL--HHSNDQHDVCDLSLIQRLHIAID 820
++K+ D LV E + G L + + ++ D I
Sbjct: 98 IMKLYDFFE--DKRNY---YLVMECYKGGELFDEIIHRMKFNEVDAAV--------IIKQ 144
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ + YLH H I+H DLKP N+LL + D + + DFGL+ E
Sbjct: 145 VLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV--------FENQK 193
Query: 878 SSIGIKGTVGYVAPE-----YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y+APE Y DV+S G++L + P
Sbjct: 194 KMKERLGTAYYIAPEVLRKKYDEKC------DVWSIGVILFILLAGYPP 236
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 5e-19
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 25/204 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG V+R G A K + + ++ E + + +RH L+ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ ++YE+M G L E + +++ + R + + ++H +
Sbjct: 225 DDNEM-----VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR-----QVCKGLCHMHEN 274
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIK-GTVGY 888
+H DLKP N++ + DFGL L P S+ + GT +
Sbjct: 275 ---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---------DPKQSVKVTTGTAEF 322
Query: 889 VAPEYGMGSEASMAGDVYSFGILL 912
APE G D++S G+L
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLS 346
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 5e-19
Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 49/221 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR-----KGAFKSFVAECEALRNIRHRNLIKI 766
IG+G F V R I E G AVK++++ + + + E ++H +++++
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI------- 819
+ SS +V+E+M L C +++R
Sbjct: 92 LETYSSDGML-----YMVFEFMDGADL-------------CF-EIVKRADAGFVYSEAVA 132
Query: 820 -----DIAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVD 871
I A+ Y H + IIH D+KP VLL ++ +G FG+A L
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG----- 184
Query: 872 DVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
E+ + G GT ++APE DV+ G++L
Sbjct: 185 --ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 5e-19
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 43/222 (19%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL--TRKGAFKSFVAECEALRNIRHRNLIKII 767
IG+G++G VY+ G A+K + L +G + + E L+ ++H N++K+
Sbjct: 8 EKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN---DQHDVCDLSLIQRLHIAIDIAYA 824
+ H LV+E++ L++ L + L+Q L+
Sbjct: 67 DVI-----HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF-LLQLLN-------G 112
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKF------LYTCQVDDVETPSS 878
I Y H ++H DLKP N+L++ + + DFGLA+ YT ++ V
Sbjct: 113 IAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI--V----- 162
Query: 879 SIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T+ Y AP+ MGS+ S D++S G + EM
Sbjct: 163 ------TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 8e-19
Identities = 55/241 (22%), Positives = 93/241 (38%), Gaps = 58/241 (24%)
Query: 700 SKATGEFS----TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---------KGAFK 746
S +T F ++G+G V R I AVK++++T + +
Sbjct: 9 SHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 747 SFVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHD 805
+ + E + LR + H N+I++ + LV++ M+ G L ++
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYE--TNTFF---FLVFDLMKKGELFDY--------- 114
Query: 806 VCDLSLIQRLH--------IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG 857
L +++ I + I LH I+H DLKP N+LLD DM +
Sbjct: 115 -----LTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLT 166
Query: 858 DFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG------DVYSFGIL 911
DFG + +D E GT Y+APE S D++S G++
Sbjct: 167 DFGFSCQ-----LDPGEKLREVC---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 912 L 912
+
Sbjct: 219 M 219
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 8e-19
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFV-AECEALRNIRHRNL 763
S + ++G G FG V++ GL +A K++ TR K V E + + H NL
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVMNQLDHANL 148
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
I++ S + LV EY+ G L + + + D L + I
Sbjct: 149 IQLYDAFESKNDI-----VLVMEYVDGGELFDRIIDESYNLTELDTILFMK-----QICE 198
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIG 881
I ++H I+H DLKP N+L + + DFGLA+ P +
Sbjct: 199 GIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRY---------KPREKLK 246
Query: 882 IK-GTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
+ GT ++APE S D++S G +LL
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-18
Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 26/204 (12%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+G FG V+R + K + + E L RHRN++ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
S++ +++E++ + E ++ S + + ++ + A+++LH H
Sbjct: 72 SMEEL-----VMIFEFISGLDIFERINTSAFELNEREIVSYVH-----QVCEALQFLHSH 121
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIK-GTVGY 888
I H D++P N++ + + +FG A+ L P + + Y
Sbjct: 122 ---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL---------KPGDNFRLLFTAPEY 169
Query: 889 VAPEYGMGSEASMAGDVYSFGILL 912
APE S A D++S G L+
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLV 193
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-18
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 39/219 (17%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITI 769
++G+G+ V I AVK++ E E L + HRN++++I
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDI 821
D LV+E M+ GS+ L H + +R H + D+
Sbjct: 80 FEEEDRF-----YLVFEKMRGGSI---LSH-----------IHKRRHFNELEASVVVQDV 120
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
A A+++LH+ I H DLKP N+L + + DF L + +
Sbjct: 121 ASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 879 SIGIKGTVGYVAPE--YGMGSEASMAG---DVYSFGILL 912
+ G+ Y+APE EAS+ D++S G++L
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 1e-18
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 57/227 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITIC 770
+G+G + V+ I V VK+L +K K E + L N+R N+I + I
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPNIITLADIV 100
Query: 771 SSIDSHGVDFK-ALVYEYMQNGSLEEWLHHSNDQHDVCDL-SLIQRLHIAIDIAY----- 823
S ALV+E++ N D L Q L DI +
Sbjct: 101 KDPVS----RTPALVFEHVNN----------------TDFKQLYQTLTDY-DIRFYMYEI 139
Query: 824 --AIEYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFL-----YTCQVDDVET 875
A++Y H I+H D+KP NV++DH+ + D+GLA+F Y +V
Sbjct: 140 LKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV----- 191
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
+ + PE + + + D++S G +L M RK P
Sbjct: 192 --------ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 2e-18
Identities = 51/221 (23%), Positives = 77/221 (34%), Gaps = 56/221 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GS+G V + + A K + F E E ++++ H N+I++
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDIAY 823
LV E G L E + + + I D+
Sbjct: 77 DNTDI-----YLVMELCTGGELFERV--------------VHKRVFRESDAARIMKDVLS 117
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
A+ Y H + H DLKP N L D + DFGLA + + +
Sbjct: 118 AVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR-----FKPGKMMRTKV 169
Query: 881 GIKGTVGYVAPE-----YGMGSEASMAGDVYSFG----ILL 912
GT YV+P+ Y G E D +S G +LL
Sbjct: 170 ---GTPYYVSPQVLEGLY--GPEC----DEWSAGVMMYVLL 201
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 2e-18
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 683 VTSPMEQQFPIVSYAELSKATGE-FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN--- 738
+ S +F + E + F ++G+G FG V+ + G L A K LN
Sbjct: 163 LDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR 222
Query: 739 LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH 798
L ++ ++ + E + L + R I+++ + ++ LV M G + ++
Sbjct: 223 LKKRKGYQGAMVEKKILAKVHSRF---IVSLAYAFETKTDLC--LVMTIMNGGDIRYHIY 277
Query: 799 HSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV-- 856
+ ++ + + A I +E+LH II+ DLKP NVLLD D +V
Sbjct: 278 NVDEDNPGFQEPRA-IFYTA-QIVSGLEHLHQRN---IIYRDLKPENVLLDDD--GNVRI 330
Query: 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
D GLA + + + G GT G++APE +G E + D ++ G+ L EM
Sbjct: 331 SDLGLAV-------ELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 2e-18
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHRNLIKIITI 769
+G+GS+G V + + G +VA+K + K K + E + L+ +RH NL+ ++ +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
C LV+E++ + ++ + L + D ++Q+ I I + H
Sbjct: 93 C-----KKKKRWYLVFEFVDH-TILDDL---ELFPNGLDYQVVQK--YLFQIINGIGFCH 141
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPSSSIGIK 883
H IIH D+KP N+L+ V + DFG A+ L Y +V
Sbjct: 142 SHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV------------- 185
Query: 884 GTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T Y APE +G A DV++ G L+ EMF+ +
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 3e-18
Identities = 59/223 (26%), Positives = 84/223 (37%), Gaps = 58/223 (26%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIRHRNLIKIITI 769
+G+GSFG V + AVKV+N + + + E E L+ + H N++K+ I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDI 821
S +V E G L + +I+R I +
Sbjct: 90 LEDSSSF-----YIVGELYTGGELFDE--------------IIKRKRFSEHDAARIIKQV 130
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
I Y+H H I+H DLKP N+LL + D + DFGL+
Sbjct: 131 FSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC-----FQQNTKMKD 182
Query: 879 SIGIKGTVGYVAPE-----YGMGSEASMAGDVYSFG----ILL 912
I GT Y+APE Y DV+S G ILL
Sbjct: 183 RI---GTAYYIAPEVLRGTYD------EKCDVWSAGVILYILL 216
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 3e-18
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 57/260 (21%)
Query: 680 KSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNL 739
++ M + + +A + ++ ++IG+G V R + G AVK++ +
Sbjct: 70 ENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV 129
Query: 740 TRKGAFKSFVA--------ECEALRNIR-HRNLIKIITICSSIDSHGVDFKALVYEYMQN 790
T + + E LR + H ++I +I S + LV++ M+
Sbjct: 130 TAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE--SSSFM---FLVFDLMRK 184
Query: 791 GSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDIAYAIEYLHHHCQPPIIHGDLK 842
G L ++L +++ I + A+ +LH + I+H DLK
Sbjct: 185 GELFDYL--------------TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLK 227
Query: 843 PSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE------YGMG 896
P N+LLD +M + DFG + ++ E GT GY+APE
Sbjct: 228 PENILLDDNMQIRLSDFGFSCH-----LEPGEKLRELC---GTPGYLAPEILKCSMDETH 279
Query: 897 SEASMAGDVYSFG----ILL 912
D+++ G LL
Sbjct: 280 PGYGKEVDLWACGVILFTLL 299
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 4e-18
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 36/217 (16%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVK--VLNLTRKGAFKSFVAECEALRNIRHRNLIKIITI 769
IG+GS+G V++ + G +VA+K + + K + E L+ ++H NL+ ++ +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
LV+EY + ++ L L++ I A+ + H
Sbjct: 71 F-----RRKRRLHLVFEYCDH-TVLHELDRYQR---GVPEHLVKS--ITWQTLQAVNFCH 119
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL------YTCQVDDVETPSSSIGIK 883
H IH D+KP N+L+ V + DFG A+ L Y +V
Sbjct: 120 KHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV------------- 163
Query: 884 GTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
T Y +PE +G DV++ G + E+
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 5e-18
Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 48/219 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITI 769
+G+G+F V R + G A ++N + + E R ++H N++++
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDI 821
S H L+++ + G L E + + R + I
Sbjct: 79 ISEEGHH-----YLIFDLVTGGELFEDI--------------VAREYYSEADASHCIQQI 119
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
A+ + H ++H +LKP N+LL + DFGLA VE
Sbjct: 120 LEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE--------VEGEQQ 168
Query: 879 SI-GIKGTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
+ G GT GY++PE D+++ G ILL
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 5e-18
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 685 SPMEQQFPIVSYAELSKATGE-FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LT 740
S +F + E T F ++G+G FG V + G + A K L +
Sbjct: 164 SIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK 223
Query: 741 RKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHS 800
++ + E + L + R ++++ + ++ LV M G L+ ++H
Sbjct: 224 KRKGEAMALNEKQILEKVNSRF---VVSLAYAYETKDALC--LVLTLMNGGDLKFHIYHM 278
Query: 801 NDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GD 858
+ + A +I +E LH I++ DLKP N+LLD H+ D
Sbjct: 279 GQAG----FPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDH--GHIRISD 329
Query: 859 FGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
GLA V + +T +G TVGY+APE + + D ++ G LL EM
Sbjct: 330 LGLAV-----HVPEGQTIKGRVG---TVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 6e-18
Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 46/219 (21%)
Query: 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEAL-RNIRHRNLIKI 766
+ ++G G G V G A+K+L A + E + + +++ I
Sbjct: 33 SKQVLGLGVNGKVLECFHRRTGQKCALKLLY-DSPKARQ----EVDHHWQASGGPHIVCI 87
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVC----DLSLIQRLHIAIDIA 822
+ + + HG ++ E M+ G L ++ D + + I R DI
Sbjct: 88 LDVYEN-MHHGKRCLLIIMECMEGGEL---FSRIQERGDQAFTEREAAEIMR-----DIG 138
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
AI++LH H I H D+KP N+L + D V + DFG AK +
Sbjct: 139 TAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT------- 188
Query: 880 IGIKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
T YVAPE Y + D++S G+++
Sbjct: 189 --PCYTPYYVAPEVLGPEKYD------KSCDMWSLGVIM 219
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 25/225 (11%)
Query: 388 IPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP---FSLGNL 443
IP + + NL+ + N L + LQ+L L ++ +I + +L
Sbjct: 22 IPDNLPFSTKNLD---LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQ--SL 75
Query: 444 TLLTELELQSNYLQGNIPSSL-GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSN 502
+ L+ L L N +Q ++ SL L + L +L L++++
Sbjct: 76 SHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAH 133
Query: 503 NFLNDSLPLEVG---NLQNLVELDISRNQVSGEIPA-TLSACTSLEY----LNLSYNSFR 554
N + S L NL NL LD+S N++ I L + L+LS N
Sbjct: 134 NLIQ-SFKLP-EYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMN 190
Query: 555 GGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
I +K L L +N L + L+ L+ + + +N
Sbjct: 191 F-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 1e-14
Identities = 59/250 (23%), Positives = 87/250 (34%), Gaps = 58/250 (23%)
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGN---GAANDLDFITPLTNCSKL 349
+ LDL+ N +F L L L+ + GA L S L
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL---------SHL 78
Query: 350 IALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQL 408
L L GN I ++ G L +L L
Sbjct: 79 STLILTGN-------------------------PIQ-SLALGAFSGLSSLQKLVAVETNL 112
Query: 409 TGTIPHEI-GKLTNLQLLYLDFNLLEGSIP----FSLGNLTLLTELELQSNYLQGNIP-- 461
++ + G L L+ L + NL++ S FS NLT L L+L SN +Q +I
Sbjct: 113 A-SLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFS--NLTNLEHLDLSSNKIQ-SIYCT 167
Query: 462 --SSLGNCRSL-LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQ 517
L L LSL++S N + + F L L L N L S+P + L
Sbjct: 168 DLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLK-ELALDTNQLK-SVPDGIFDRLT 224
Query: 518 NLVELDISRN 527
+L ++ + N
Sbjct: 225 SLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 9e-13
Identities = 51/260 (19%), Positives = 86/260 (33%), Gaps = 58/260 (22%)
Query: 198 LKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIY-NLSSLELLYLRGNRL 256
K +++ N L + L+++ + + Y +LS L L L GN +
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPI 88
Query: 257 IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLN-LFSGKVPINFSR 315
SL + L L V E N + + L L++ N + S K+P FS
Sbjct: 89 Q-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 316 LQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTV 375
L NL L L+ N + + DL + + +
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLH---------------------------QMPLLNL 180
Query: 376 QINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGS 435
+++ N ++ I K L+ L LD N L+ S
Sbjct: 181 SLDLSLNPMN-------------------------FIQPGAFKEIRLKELALDTNQLK-S 214
Query: 436 IPF-SLGNLTLLTELELQSN 454
+P LT L ++ L +N
Sbjct: 215 VPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 38/212 (17%)
Query: 444 TLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIF----NITTLSLY-- 497
L+L N L+ S + L L++S+ ++ + + +++TL L
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 86
Query: 498 ------------------LDLSNNFLNDSLPLEV-GNLQNLVELDISRNQV-SGEIPATL 537
L L SL G+L+ L EL+++ N + S ++P
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 145
Query: 538 SACTSLEYLNLSYNSFR---GGIPLSLSSLKSVKV-LDLSSNNLSGQIPKYLENLSFLEY 593
S T+LE+L+LS N + L + + + LDLS N ++ P + + L+
Sbjct: 146 SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LKE 204
Query: 594 LNISSNHFEGKVPTKGVF---SNKTRISLSGN 622
L + +N + VP G+F ++ +I L N
Sbjct: 205 LALDTNQLK-SVP-DGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-11
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 459 NIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQ 517
N+P S N L++S N L F+ L LDLS + ++ +L
Sbjct: 25 NLPFSTKN------LDLSFNPLRHLGSYSFFSFPELQ-VLDLSRCEIQ-TIEDGAYQSLS 76
Query: 518 NLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
+L L ++ N + S +SL+ L + + LK++K L+++ N +
Sbjct: 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136
Query: 578 -SGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSN-------KTRISLSGN 622
S ++P+Y NL+ LE+L++SSN + + LS N
Sbjct: 137 QSFKLPEYFSNLTNLEHLDLSSNKI--QSIYCTDLRVLHQMPLLNLSLDLSLN 187
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 8e-08
Identities = 45/257 (17%), Positives = 81/257 (31%), Gaps = 45/257 (17%)
Query: 63 CQWTGVTC-GHRHQRV--------TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYG 113
C ++ L L + + S + L+++DL+
Sbjct: 7 VPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI-Q 65
Query: 114 NIPHEV-GRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWM 172
I LS L TL+L N +A
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQ-------------------------SLALGAFSGLS 100
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL-SGRIPNTLGQLRNSFYLNIAGNQ 231
L+KL + +L IG+L LK +NV N + S ++P L N +L+++ N+
Sbjct: 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Query: 232 FSGNVPPSIY-NLSSLEL----LYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIP 286
++ + L + L L L N + + +L + N
Sbjct: 161 IQ-SIYCTDLRVLHQMPLLNLSLDLSLNP-MNFIQPGA-FKEIRLKELALDTNQLKSVPD 217
Query: 287 NSFSNTSNLVMLDLNLN 303
F ++L + L+ N
Sbjct: 218 GIFDRLTSLQKIWLHTN 234
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 9e-18
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 50/217 (23%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G+FG V G G VAVK+LN + E + L+ RH ++IK+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ I + F +V EY+ G L +++ +H + ++ + I A++Y
Sbjct: 79 V---ISTPTDFF--MVMEYVSGGELFDYI----CKHGR--VEEMEARRLFQQILSAVDYC 127
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA------KFLYT-CQVDDVETPSSSIG 881
H H ++H DLKP NVLLD M A + DFGL+ +FL T C
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC------------- 171
Query: 882 IKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
G+ Y APE Y G E D++S G++L
Sbjct: 172 --GSPNYAAPEVISGRLYA-GPEV----DIWSCGVIL 201
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 49/219 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRNLIKIIT 768
+G+G+F V R + GL A K++N T+K + F+ E R ++H N++++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAID 820
H LV++ + G L E + + R
Sbjct: 73 SIQEESFH-----YLVFDLVTGGELFEDI--------------VAREFYSEADASHCIQQ 113
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
I +I Y H + I+H +LKP N+LL + DFGLA V
Sbjct: 114 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE--------VNDSE 162
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
+ G GT GY++PE S D+++ G ILL
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 1e-17
Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 49/219 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRNLIKIIT 768
+G+G+F V R + GL A K++N T+K + F+ E R ++H N++++
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAID 820
H LV++ + G L + ++ R
Sbjct: 96 SIQEESFH-----YLVFDLVTGGEL-------------FE-DIVAREFYSEADASHCIQQ 136
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
I +I Y H + I+H +LKP N+LL + DFGLA V+D E
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE-----VNDSEAWH 188
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
G GT GY++PE S D+++ G ILL
Sbjct: 189 ---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 86.3 bits (214), Expect = 1e-17
Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 46/221 (20%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNL 763
++ M+G+GSFG V + AVKV+N + + E E L+ + H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL----HHSNDQHDVCDLSLIQRLHIAI 819
+K+ I DS +V E G L + + S +HD I
Sbjct: 84 MKLFEILE--DSSSF---YIVGELYTGGELFDEIIKRKRFS--EHDAAR--------IIK 128
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETP 876
+ I Y+H H I+H DLKP N+LL + D + DFGL+ +
Sbjct: 129 QVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--------FQQN 177
Query: 877 SSSIGIKGTVGYVAPE-----YGMGSEASMAGDVYSFGILL 912
+ GT Y+APE Y DV+S G++L
Sbjct: 178 TKMKDRIGTAYYIAPEVLRGTYDEKC------DVWSAGVIL 212
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 1e-17
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 42/224 (18%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKII 767
IG+GSFG V + + A+K +N + ++ E + ++ + H L+ +
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL- 80
Query: 768 TICSSIDSHGVDFKA-----LVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAID 820
F+ +V + + G L L + + V +L I +
Sbjct: 81 --------WYS-FQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV-------KLFIC-E 123
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+ A++YL + IIH D+KP N+LLD H+ DF +A L + + + +
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMA- 175
Query: 881 GIKGTVGYVAPE---YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y+APE G+ S A D +S G+ E+ +RP
Sbjct: 176 ---GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 2e-17
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 44/228 (19%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKGAFKSFVAECEALRNIRHRNLI 764
++ +IG GSFG V++ L E VA+K VL R FK+ E + +R ++H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR---FKN--RELQIMRIVKHPNVV 95
Query: 765 KII-TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+ S+ D F LV EY+ ++ H + LI+ Y
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKL------YMY 148
Query: 824 ----AIEYLHHHCQPPIIHGDLKPSNVLLDHDM-VAHVGDFGLAKFLYTCQVDDVETPSS 878
++ Y+H I H D+KP N+LLD V + DFG AK L + +
Sbjct: 149 QLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-------IAGEPN 198
Query: 879 SIGIKGTVGYV------APEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
V Y+ APE G+ + D++S G ++ E+ +
Sbjct: 199 -------VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 2e-17
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 62/238 (26%)
Query: 698 ELSKATGEFS----TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECE 753
+L + + +F+ IG GS+ R I + AVK+++ +++ + E E
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIE 67
Query: 754 AL-RNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
L R +H N+I + + D V +V E M+ G L + + +
Sbjct: 68 ILLRYGQHPNIITLKDVYD--DGKYV---YVVTELMKGGELLDKI--------------L 108
Query: 813 QRLH--------IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFG 860
++ + I +EYLH ++H DLKPSN+L + + DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
AK L + TP T +VAPE Y A D++S G+LL
Sbjct: 166 FAKQLRAEN-GLLMTPC------YTANFVAPEVLERQGYD------AACDIWSLGVLL 210
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 2e-17
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 41/251 (16%)
Query: 685 SPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKG 743
S M + K F M GQG+FG V G G+ VA+K V+ R
Sbjct: 4 SMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-- 61
Query: 744 AFKS-FVAECEALRNIRHRNLIKIITICSSIDSHGVD--FKALVYEYMQNGSLEEWLHHS 800
F++ + + L + H N++++ + ++ + +V EY+ + LH
Sbjct: 62 -FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-----PDTLHRC 115
Query: 801 NDQHDVCDLSLIQRLHIAIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAH 855
+ ++ + I + + +I LH + H D+KP NVL++ D
Sbjct: 116 CRNYYRRQVAP-PPILIKV-FLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLK 172
Query: 856 VGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV------APEYGMGSEA-SMAGDVYSF 908
+ DFG AK L E V Y+ APE G++ + A D++S
Sbjct: 173 LCDFGSAKKL-----SPSEP---------NVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218
Query: 909 GILLLEMFIRK 919
G + EM + +
Sbjct: 219 GCIFAEMMLGE 229
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 3e-17
Identities = 51/220 (23%), Positives = 79/220 (35%), Gaps = 55/220 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA-ECEALRNIRHRNLIKIITIC 770
+G+G++G V + VAVK++++ R + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY------A 824
+ + L EY G L + + + +
Sbjct: 74 --RREGNIQY--LFLEYCSGGELFDRIEPD------------IGMPEPDAQRFFHQLMAG 117
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA---------KFLYT-CQVDDVE 874
+ YLH I H D+KP N+LLD + DFGLA + L C
Sbjct: 118 VVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------ 168
Query: 875 TPSSSIGIKGTVGYVAPE--YGMGSEASMAGDVYSFGILL 912
GT+ YVAPE A DV+S GI+L
Sbjct: 169 ---------GTLPYVAPELLKRREFHAEPV-DVWSCGIVL 198
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 5e-17
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 22/244 (9%)
Query: 686 PMEQQFPIVSYAELSKATGEFSTSNM-IGQGSFGFVYRGILGEG--GLLVAVKVLNLTRK 742
M+ F + +E + F +G+G++G VY+ +G A+K +
Sbjct: 2 KMDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE--GT 59
Query: 743 GAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQN--GSLEEWLHHS 800
G S E LR ++H N+I + + SH L+++Y ++ + ++ S
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKV---FLSHADRKVWLLFDYAEHDLWHIIKFHRAS 116
Query: 801 NDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH----V 856
L + I I YLH + ++H DLKP+N+L+ + +
Sbjct: 117 KANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI 173
Query: 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEM 915
D G A+ ++ + + T Y APE +G+ + A D+++ G + E+
Sbjct: 174 ADMGFARLFN----SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
Query: 916 FIRK 919
+
Sbjct: 230 LTSE 233
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 5e-17
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
+N+ T ++++ N++S ++PS L L ++ N+L T+P I +L NL+ L
Sbjct: 33 SNIPADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETL 90
Query: 426 YLDFNLLEGSIP---FSLGNLTLLTELELQSNYLQ---GNIPSSLGNCRSLLSLNVSQNK 479
++ N L+ ++P F L L EL L N L+ + SL L L++ N+
Sbjct: 91 WVTDNKLQ-ALPIGVFD--QLVNLAELRLDRNQLKSLPPRVFDSLTK---LTYLSLGYNE 144
Query: 480 LTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLS 538
L +LPK +F+ T L L NN L +P L L L + NQ+
Sbjct: 145 LQ-SLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFD 202
Query: 539 ACTSLEYLNLSYN 551
+ L+ L L N
Sbjct: 203 SLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 1e-14
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
++ LDL N S F RL L L L N L A L N L L
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK---ELKN---LETL 90
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGT 411
+ N+ LP + + ++ + RNQ+ ++P + +L L + N+L +
Sbjct: 91 WVTDNKL-QALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-S 147
Query: 412 IPHEI-GKLTNLQLLYLDFNLLEGSIPFSL-GNLTLLTELELQSNYLQGNIPSSLGNCRS 469
+P + KLT+L+ L L N L+ +P LT L L+L +N L+ + +
Sbjct: 148 LPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEK 206
Query: 470 LLSLNVSQN 478
L L + +N
Sbjct: 207 LKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-14
Identities = 59/199 (29%), Positives = 82/199 (41%), Gaps = 14/199 (7%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ---GNIPS 462
+LT IP I + + L L N L + LT L L L N LQ I
Sbjct: 26 KKLT-AIPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK 82
Query: 463 SLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVE 521
L N L +L V+ NKL ALP +F+ L L N L SLP V +L L
Sbjct: 83 ELKN---LETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTY 137
Query: 522 LDISRNQVSGEIPATL-SACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ 580
L + N++ +P + TSL+ L L N + + L +K L L +N L
Sbjct: 138 LSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196
Query: 581 IPKYLENLSFLEYLNISSN 599
++L L+ L + N
Sbjct: 197 PEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 12/184 (6%)
Query: 125 LDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHL 184
L L +N S + L L +N + + A I LE L + DN L
Sbjct: 39 TKKLDLQSNKLSSLPSKAFHRLTKL-RLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL 97
Query: 185 TGQLPASI-GNLSVLKVINVEENR---LSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
LP + L L + ++ N+ L R+ ++L +L YL++ N+ ++P +
Sbjct: 98 Q-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLT---YLSLGYNELQ-SLPKGV 152
Query: 241 Y-NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLD 299
+ L+SL+ L L N+L +P L +L + N +F + L ML
Sbjct: 153 FDKLTSLKELRLYNNQL-KRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQ 211
Query: 300 LNLN 303
L N
Sbjct: 212 LQEN 215
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 6e-17
Identities = 59/218 (27%), Positives = 81/218 (37%), Gaps = 54/218 (24%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA-ECEALRNIRHRNLIKIITIC 770
IG G+FG LVAVK + R A V E R++RH N+++ +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIE--RGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA-------- 822
+ +H A++ EY G L E + + D A
Sbjct: 86 LT-PTH----LAIIMEYASGGELYER--------------ICNAGRFSEDEARFFFQQLL 126
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH--VGDFGLAKFLYTCQVDDVETPSSSI 880
+ Y H I H DLK N LLD + DFG +K V P S++
Sbjct: 127 SGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKS----SVLH-SQPKSTV 178
Query: 881 GIKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
GT Y+APE Y G A DV+S G+ L
Sbjct: 179 ---GTPAYIAPEVLLRQEYD-GKIA----DVWSCGVTL 208
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 7e-17
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 50/217 (23%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G+FG V G G VAVK+LN + E + L+ RH ++IK+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ I + F +V EY+ G L +++ ++ L + + I ++Y
Sbjct: 84 V---ISTPSDIF--MVMEYVSGGELFDYI----CKNGR--LDEKESRRLFQQILSGVDYC 132
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA------KFLYT-CQVDDVETPSSSIG 881
H H ++H DLKP NVLLD M A + DFGL+ +FL T C
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC------------- 176
Query: 882 IKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
G+ Y APE Y G E D++S G++L
Sbjct: 177 --GSPNYAAPEVISGRLYA-GPEV----DIWSSGVIL 206
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 9e-17
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 393 GNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQ 452
VN + LT +P ++ + +L+L NLL +L T LT+L L
Sbjct: 12 HLEVNCDK-----RNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 453 SNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLE 512
L + G L +L++S N+L +LP + L+ LD+S N L SLPL
Sbjct: 64 RAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALT-VLDVSFNRLT-SLPLG 118
Query: 513 V-GNLQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSL-SSLKSVKV 569
L L EL + N++ +P L+ LE L+L+ N+ +P L + L+++
Sbjct: 119 ALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDT 176
Query: 570 LDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
L L N+L IPK L + + N
Sbjct: 177 LLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 6e-16
Identities = 51/240 (21%), Positives = 76/240 (31%), Gaps = 45/240 (18%)
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
++S + L +LP D+ +T+ L L+
Sbjct: 8 KVASHLEVNCDKRNL-TALPPDL------------------------PKDTTIL---HLS 39
Query: 302 LNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGG 361
NL L+ L L L L L L L L N+
Sbjct: 40 ENLLYTFSLATLMPYTRLTQLNLDRAELTK-----LQVDGTLPV---LGTLDLSHNQL-Q 90
Query: 362 VLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKL 419
LP L T +++ N+++ ++P G L L + N+L T+P +
Sbjct: 91 SLPLLGQTLPALT-VLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGLLTPT 147
Query: 420 TNLQLLYLDFNLLEGSIPFSL-GNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQN 478
L+ L L N L +P L L L L LQ N L IP L + N
Sbjct: 148 PKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 9e-11
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
L +++N L A++ + L +N++ L+ ++ G L L+++ NQ
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ 90
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
++P L +L +L + NR + SLP+ L +L + N P + T
Sbjct: 91 -SLPLLGQTLPALTVLDVSFNR-LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTP 148
Query: 294 NLVMLDLNLNLFSGKVPIN-FSRLQNLSWLLLAGNNL 329
L L L N + ++P + L+NL LLL N+L
Sbjct: 149 KLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 40/209 (19%), Positives = 68/209 (32%), Gaps = 40/209 (19%)
Query: 224 YLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSG 283
L+++ N ++ + L L L L L +D L L ++ N
Sbjct: 35 ILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQVDGTLP--VLGTLDLSHNQLQS 91
Query: 284 PIPNSFSNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFITP 342
+P L +LD++ N + +P+ L L L L GN L L
Sbjct: 92 -LPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPK 149
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGF 401
L ++++ N ++ +P+G+ L NL+
Sbjct: 150 LE-------------------------------KLSLANNNLT-ELPAGLLNGLENLDTL 177
Query: 402 GIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
+ N L TIP L +L N
Sbjct: 178 LLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 11/128 (8%)
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
++ L +LP ++ L +S N + ATL T L LNL +
Sbjct: 15 VNCDKRNL-TALP--PDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-L 70
Query: 558 PLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVF---SNK 614
+ +L + LDLS N L +P + L L L++S N +P G
Sbjct: 71 QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPL-GALRGLGEL 126
Query: 615 TRISLSGN 622
+ L GN
Sbjct: 127 QELYLKGN 134
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 9e-17
Identities = 58/220 (26%), Positives = 84/220 (38%), Gaps = 55/220 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+G+ VYR A+KVL + K E L + H N+IK+ I
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDIAY 823
+ +LV E + G L + + +++ + I
Sbjct: 119 TPTEI-----SLVLELVTGGELFDRI--------------VEKGYYSERDAADAVKQILE 159
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
A+ YLH + I+H DLKP N+L D + DFGL+K VE
Sbjct: 160 AVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI--------VEHQVLMK 208
Query: 881 GIKGTVGYVAPE----YGMGSEASMAGDVYSFG----ILL 912
+ GT GY APE G E D++S G ILL
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEV----DMWSVGIITYILL 244
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 52/214 (24%), Positives = 80/214 (37%), Gaps = 43/214 (20%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA-ECEALRNIRHRNLIKIITIC 770
+G+G++G V + VAVK++++ R + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+ + L EY G L + + D + + + YLH
Sbjct: 74 --RREGNIQY--LFLEYCSGGELFDRI--EPDIG----MPEPDAQRFFHQLMAGVVYLHG 123
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA---------KFLYT-CQVDDVETPSSSI 880
I H D+KP N+LLD + DFGLA + L C
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------------ 168
Query: 881 GIKGTVGYVAPE--YGMGSEASMAGDVYSFGILL 912
GT+ YVAPE A DV+S GI+L
Sbjct: 169 ---GTLPYVAPELLKRREFHAEPV-DVWSCGIVL 198
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 1e-16
Identities = 26/245 (10%), Positives = 56/245 (22%), Gaps = 65/245 (26%)
Query: 712 IGQGSFGFVYRG---ILGEGGLLVAVKVL--NLTRKGAFKS-FVAECEALRNIRHRNLIK 765
G ++ L VA+ + ++ L I
Sbjct: 39 HGGVPPLQFWQALDTALDR---QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG--- 92
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ + + + +V E+++ GSL+E S S + + +A A
Sbjct: 93 VARVLDVVHTRAGGL--VVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAA 142
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
+ H + PS V + D +
Sbjct: 143 DAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP-------------------------- 173
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945
+A+ D+ G L + + + P + +
Sbjct: 174 --------ATMPDANPQDDIRGIGASLYALLVNRWPLPE------AGVRSGLAPAERDTA 219
Query: 946 EIVDP 950
Sbjct: 220 GQPIE 224
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 61/226 (26%), Positives = 88/226 (38%), Gaps = 69/226 (30%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVA-ECEALRNIRHRNLIKIIT 768
+G+GSFG V + VA+K ++ K V E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 769 ICSSIDSHGVDFKALVYEY---------MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ I + +V EY ++ + E +
Sbjct: 77 V---ITTPTDIV--MVIEYAGGELFDYIVEKKRMTE----------------DEGRRFFQ 115
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLA------KFLYT-CQVDD 872
I AIEY H H I+H DLKP N+LLD ++ + DFGL+ FL T C
Sbjct: 116 QIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---- 168
Query: 873 VETPSSSIGIKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
G+ Y APE Y G E DV+S GI+L
Sbjct: 169 -----------GSPNYAAPEVINGKLYA-GPEV----DVWSCGIVL 198
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 1e-16
Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 44/213 (20%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITIC 770
+G+GSF + + + AVK+++ K + E AL+ H N++K+ +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH--------IAIDIA 822
LV E + G L + ++ H I +
Sbjct: 76 HDQLHT-----FLVMELLNGGEL---FER-----------IKKKKHFSETEASYIMRKLV 116
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
A+ ++H ++H DLKP N+L + ++ + DFG A+ ++TP
Sbjct: 117 SAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPC-- 170
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
T+ Y APE + + D++S G++L
Sbjct: 171 ----FTLHYAAPELLNQNGYDESCDLWSLGVIL 199
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 49/216 (22%), Positives = 77/216 (35%), Gaps = 42/216 (19%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G F V + GL A K + + A + V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL----HHSNDQHDVCDLSLIQRLHIAIDI 821
+ + + L+ E + G L ++L S + + I
Sbjct: 80 LHDVYENRTDV-----VLILELVSGGELFDFLAQKESLS--EEEAT--------SFIKQI 124
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ YLH I H DLKP N++L + DFGLA +
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---------EDG 172
Query: 878 SSI-GIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
I GT +VAPE + D++S G++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 3e-16
Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR--------HRN 762
+G G F V+ VA+K++ K ++ E + L+ +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVR-GDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 763 LIKIITICSSIDSHGVDFK--ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
I+ + + G + +V+E + +L + + L ++ I+
Sbjct: 85 ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHR--GIPLIYVK--QISKQ 139
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH------VGDFGLAKFLYTCQVDDVE 874
+ ++Y+H C IIH D+KP NVL++ + D G A + + ++
Sbjct: 140 LLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 197
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
T Y +PE +G+ D++S L+ E+
Sbjct: 198 TRE----------YRSPEVLLGAPWGCGADIWSTACLIFELI 229
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 4e-16
Identities = 49/216 (22%), Positives = 76/216 (35%), Gaps = 42/216 (19%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G F V + GL A K + + A + V E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL----HHSNDQHDVCDLSLIQRLHIAIDI 821
+ + + L+ E + G L ++L S + + I
Sbjct: 80 LHDVYENRTDV-----VLILELVSGGELFDFLAQKESLS--EEEAT--------SFIKQI 124
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLL----DHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+ YLH I H DLKP N++L + DFGLA +
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---------EDG 172
Query: 878 SSI-GIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
I GT +VAPE + D++S G++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 5e-16
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 50/230 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G+G++G V G +VA+K + F + E + L++ +H N+I
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-----PFDKPLFALRTLREIKILKHFKHENIIT 73
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLI---QRL---HI 817
I I +F ++ E MQ DL + Q L HI
Sbjct: 74 IFNIQRPDSFE--NFNEVYIIQELMQ-----------------TDLHRVISTQMLSDDHI 114
Query: 818 AIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
Y A++ LH +IH DLKPSN+L++ + V DFGLA+ + D+
Sbjct: 115 QY-FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 874 ETPSSSIGIKGTVG---YVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
E G+ V Y APE + S S A DV+S G +L E+F+R+
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 6e-16
Identities = 39/225 (17%), Positives = 74/225 (32%), Gaps = 12/225 (5%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSS-L 464
+++T IP ++ N L L + L ++E+ N + I +
Sbjct: 19 SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 75
Query: 465 GNCRSLLSLNVSQ-NKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELD 523
N L + + + N L + + F YL +SN + + + V LD
Sbjct: 76 SNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLD 134
Query: 524 ISRNQVSGEIPATLSA--CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQI 581
I N I L L+ N + + + + ++ +NNL ++
Sbjct: 135 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-EL 193
Query: 582 PKY-LENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKL 625
P S L+IS +P+ N ++ L
Sbjct: 194 PNDVFHGASGPVILDISRTRIH-SLPS-YGLENLKKLRARSTYNL 236
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 3e-15
Identities = 48/229 (20%), Positives = 81/229 (35%), Gaps = 34/229 (14%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGI-DLNQLT 409
L + + + + I + +N + I + + NL L+ I N L
Sbjct: 35 LRFVLTKLRVIQKGAFSGFGDLEK-IEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLL 93
Query: 410 GTIPHEI-GKLTNLQLLYLDFNLLEGSIP-FSLGNLTLLTELELQSNYLQGNIPSSL--G 465
I E L NLQ L + ++ +P + L++Q N I + G
Sbjct: 94 -YINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151
Query: 466 NCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDI 524
+ L +++N + + FN T L NN L + LP +V V LDI
Sbjct: 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNL-EELPNDVFHGASGPVILDI 209
Query: 525 SRNQVSGEIPA---------------------TLSACTSLEYLNLSYNS 552
SR ++ +P+ TL +L +L+Y S
Sbjct: 210 SRTRIH-SLPSYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 2e-13
Identities = 32/281 (11%), Positives = 75/281 (26%), Gaps = 47/281 (16%)
Query: 181 DNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSI 240
++ +T ++P+ + + +L + + I+ N + +
Sbjct: 18 ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV 74
Query: 241 -YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLD 299
NL L + + + + P +F N NL L
Sbjct: 75 FSNLPKLHEIRIEKANNLLYIN------------------------PEAFQNLPNLQYLL 110
Query: 300 LNLNLFSGKVPINFSRLQNLSWLLLAGNN----LGNGAANDLDFITPLTNCSKLIALGLY 355
++ ++ L + N + + L + + L L
Sbjct: 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL--------SFESVILWLN 162
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPH 414
N + + + N + +P+ + I ++ +
Sbjct: 163 KNGIQEIHNSAFNGTQLDEL-NLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSY 220
Query: 415 EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNY 455
+ L L+ L+ +P +L L L E L
Sbjct: 221 GLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 4e-13
Identities = 43/266 (16%), Positives = 80/266 (30%), Gaps = 24/266 (9%)
Query: 245 SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNL 304
S + + +++ +P D+ +FS +L ++++ N
Sbjct: 10 SNRVFLCQESKV-TEIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQND 65
Query: 305 FSGKVPIN-FSRLQNLSWLLLAGNNLGNGAANDLDFITP--LTNCSKLIALGLYGNRFGG 361
+ + FS L L + + N +L +I P N L L +
Sbjct: 66 VLEVIEADVFSNLPKLHEIRIEKAN-------NLLYINPEAFQNLPNLQYLLISNTGIK- 117
Query: 362 VLPHSIANLSTTTVQINMGRNQISGTIPSGI--GNLVNLNGFGIDLNQLTGTIPHEIGKL 419
LP S V +++ N TI G ++ N + I +
Sbjct: 118 HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG 176
Query: 420 TNL-QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQN 478
T L +L D N LE + L++ + L N + L + +
Sbjct: 177 TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 236
Query: 479 KLTGALPKQIFNITTLSLYLDLSNNF 504
K L + L L+
Sbjct: 237 KKLPTL----EKLVALM-EASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 1e-11
Identities = 36/226 (15%), Positives = 63/226 (27%), Gaps = 9/226 (3%)
Query: 101 LRLIDLADNNFYGNIPHEV-GRLSRLDTLMLANNSFSGKIPTN-LSGCSNLIN-FLAHGN 157
+ I L+ + ++ N I + S L + N
Sbjct: 32 AIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90
Query: 158 NLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTL- 216
NL+ I N L+ L I++ + + ++++++N I
Sbjct: 91 NLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 149
Query: 217 -GQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFV 275
G S L + N + S +N + L+ L L N + LP D+
Sbjct: 150 VGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 208
Query: 276 IAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSW 321
I+ N L NL L S
Sbjct: 209 ISRTRIHSLPSYGLENLKKLRARSTY-NLKKLPTLEKLVALMEASL 253
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 5/133 (3%)
Query: 78 TKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV--GRLSRLDTLMLANNSF 135
L + N I + H + L+D+ DN I G L L N
Sbjct: 107 QYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166
Query: 136 SGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASI-GN 194
+I + + L NN + ++ ++ + L I+ + LP+ N
Sbjct: 167 Q-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLEN 224
Query: 195 LSVLKVINVEENR 207
L L+ + +
Sbjct: 225 LKKLRARSTYNLK 237
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 6e-16
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA---FKSFVAECEALRNIRHRN 762
FS IG GSFG VY +VA+K ++ + K + ++ + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 763 LIKIITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI-- 819
I+ + + A LV EY + + H +Q + IA
Sbjct: 116 TIQY------RGCYLREHTAWLVMEYCLGSASDLLEVHKK---------PLQEVEIAAVT 160
Query: 820 -DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ YLH H +IH D+K N+LL + +GDFG A + +
Sbjct: 161 HGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANS--- 209
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAG---DVYSFGILLLEM 915
GT ++APE + + DV+S GI +E+
Sbjct: 210 ---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 7e-16
Identities = 55/220 (25%), Positives = 83/220 (37%), Gaps = 46/220 (20%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G F V + G A K + R + + V+ E LR IRH N+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL----HHSNDQHDVCDLSLIQRLHIAIDI 821
+ I + L+ E + G L ++L + + + L Q I
Sbjct: 73 LHDIFENKTDV-----VLILELVSGGELFDFLAEKESLT--EDEATQF-LKQ-------I 117
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH----VGDFGLAKFLYTCQVDDVETPS 877
+ YLH I H DLKP N++L V + + DFG+A +
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---------EAG 165
Query: 878 SSI-GIKGTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
+ I GT +VAPE + D++S G ILL
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 205
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 8e-16
Identities = 51/220 (23%), Positives = 85/220 (38%), Gaps = 47/220 (21%)
Query: 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNI-RHRNLIKI 766
TS ++G G G V + A+K+L A + E E + ++++I
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARR----EVELHWRASQCPHIVRI 120
Query: 767 ITICSSIDSHGVDFKA-LVYEYMQNGSLEEWLHHSNDQHDVC----DLSLIQRLHIAIDI 821
+ + + + +V E + G L D+ D + S I + I
Sbjct: 121 VDVYE--NLYAGRKCLLIVMECLDGGEL---FSRIQDRGDQAFTEREASEIMK-----SI 170
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
AI+YLH I H D+KP N+L + + + DFG AK + + TP
Sbjct: 171 GEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPC- 224
Query: 879 SIGIKGTVGYVAPE------YGMGSEASMAGDVYSFGILL 912
T YVAPE Y + D++S G+++
Sbjct: 225 -----YTPYYVAPEVLGPEKYD------KSCDMWSLGVIM 253
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 1e-15
Identities = 52/259 (20%), Positives = 83/259 (32%), Gaps = 64/259 (24%)
Query: 681 SSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT 740
+P P + E+ ++G+G FG V+ G L VA+KV+
Sbjct: 8 QGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIP-- 65
Query: 741 RKGAFKSFVAECEALRNIRHRNL-IKIITICSSIDSH-GV----DFKA------LVYEYM 788
++ V L + L + ++ + H GV D+ LV E
Sbjct: 66 -----RNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERP 120
Query: 789 QNGS-LEEWL-HHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNV 846
L +++ Q + AI++ H ++H D+K N+
Sbjct: 121 LPAQDLFDYITEKGPLGEGPSRCFFGQ-------VVAAIQHCHSRG---VVHRDIKDENI 170
Query: 847 LLDHDM-VAHVGDFGLA------KFLYTCQVDDVETPSSSIGIKGTVGYVAPE------Y 893
L+D A + DFG + GT Y PE Y
Sbjct: 171 LIDLRRGCAKLIDFGSGALLHDEPYTDFD---------------GTRVYSPPEWISRHQY 215
Query: 894 GMGSEASMAGDVYSFGILL 912
A V+S GILL
Sbjct: 216 -HALPA----TVWSLGILL 229
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-15
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 43/222 (19%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F +G GSFG V E G A+K+L+ + + + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH---DVCDLSLIQRLHIA 818
L+K+ S D+ + V EY+ G + + H R + A
Sbjct: 102 FLVKLE--FSFKDNSNLYM---VMEYVAGGEM--FSHLRRIGRFSEPHA------RFYAA 148
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL----YT-CQVDDV 873
I EYLH +I+ DLKP N+L+D V DFG AK + +T C
Sbjct: 149 -QIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----- 199
Query: 874 ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
GT +APE + + A D ++ G+L+ EM
Sbjct: 200 ----------GTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 33/222 (14%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRN 762
F +IG+G+F V + + G + A+K++N + ++G F E + L N R
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
+ ++ + D ++ LV EY G L L ++ +++ R ++A +I
Sbjct: 123 ITQLH--FAFQDE---NYLYLVMEYYVGGDLLTLLSKFGERIPA-EMA---RFYLA-EIV 172
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSI 880
AI+ +H +H D+KP N+LLD H+ DFG L
Sbjct: 173 MAIDSVHRLG---YVHRDIKPDNILLDRC--GHIRLADFGSCLKLRADGTVRSLVAV--- 224
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVY-------SFGILLLEM 915
GT Y++PE Y + G+ EM
Sbjct: 225 ---GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM 263
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 1e-15
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 39/219 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
IG G+ G V VA+K L+ F++ E ++ + H+N+I
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLS----RPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLH---HSNDQHDVCDLSLIQRLHIAID 820
++ + + S +F+ +V E M + L H+ L Q L
Sbjct: 89 LLNVFTPQKSLE-EFQDVYIVMELM-----DANLCQVIQMELDHERMSYLLYQMLC---- 138
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
I++LH IIH DLKPSN+++ D + DFGLA+ T + TP
Sbjct: 139 ---GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVV- 188
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
T Y APE +G D++S G ++ EM
Sbjct: 189 ----TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 1e-15
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRN 762
FS +IG+G FG VY + G + A+K L+ + K + E L + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAID 820
I+ + + + + + M G L L + D+ R + A +
Sbjct: 251 CPFIVCMSYAFHTPDKLS--FILDLMNGGDLHYHLSQHGVFSEADM-------RFYAA-E 300
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSS 878
I +E++H+ +++ DLKP+N+LLD HV D GLA + +S
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEH--GHVRISDLGLAC-----DFSKKKPHAS 350
Query: 879 SIGIKGTVGYVAPE-YGMGSEASMAGDVYSFGILLLEM 915
GT GY+APE G + D +S G +L ++
Sbjct: 351 V----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 51/267 (19%), Positives = 85/267 (31%), Gaps = 78/267 (29%)
Query: 680 KSSVTSPMEQQFPIVSYAELSKAT--GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVL 737
+ S +P K ++ ++G G FG VY GI L VA+K +
Sbjct: 17 RGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV 76
Query: 738 NLTRKGAFKSFVA------ECEALRNIRHR--NLIKIITICSSIDSHGVDFKALVYEY-- 787
R + E L+ + +I+++ V L+ E
Sbjct: 77 EKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-PDSFV----LILERPE 131
Query: 788 ---------MQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIH 838
+ G+L+E ++ R + A+ + H+ ++H
Sbjct: 132 PVQDLFDFITERGALQE---------ELA------R-SFFWQVLEAVRHCHNCG---VLH 172
Query: 839 GDLKPSNVLLDHD-MVAHVGDFGLA------KFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
D+K N+L+D + + DFG + GT Y P
Sbjct: 173 RDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---------------GTRVYSPP 217
Query: 892 E------YGMGSEASMAGDVYSFGILL 912
E Y G A V+S GILL
Sbjct: 218 EWIRYHRY-HGRSA----AVWSLGILL 239
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-15
Identities = 57/255 (22%), Positives = 98/255 (38%), Gaps = 52/255 (20%)
Query: 682 SVTSPMEQQFPIVSYAELSKATGE-FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN-- 738
++ +E P S + + E F +IG+G+FG V L + A+K+LN
Sbjct: 51 NILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW 110
Query: 739 -LTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWL 797
+ ++ F E + L N + + + + D + LV +Y G L
Sbjct: 111 EMLKRAETACFREERDVLVNGDSKWITTL--HYAFQDD---NNLYLVMDYYVGGDL---- 161
Query: 798 HHSNDQHDVCDLSLIQRLHIAID----------IAYAIEYLHHHCQPPIIHGDLKPSNVL 847
L+L+ + + + AI+ +H +H D+KP N+L
Sbjct: 162 -----------LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNIL 207
Query: 848 LDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAG-- 903
+D + H+ DFG L ++D SS GT Y++PE E
Sbjct: 208 MDMN--GHIRLADFGSCLKL----MEDGTVQSSVAV--GTPDYISPEILQAMEGGKGRYG 259
Query: 904 ---DVYSFGILLLEM 915
D +S G+ + EM
Sbjct: 260 PECDWWSLGVCMYEM 274
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 2e-15
Identities = 49/215 (22%), Positives = 80/215 (37%), Gaps = 40/215 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G F V + GL A K + R + + V+ E L+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWL----HHSNDQHDVCDLSLIQRLHIAIDI 821
+ + + L+ E + G L ++L + + + + I
Sbjct: 79 LHEVYENKTDV-----ILILELVAGGELFDFLAEKESLT--EEEATEF--------LKQI 123
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAH----VGDFGLAKFLYTCQVDDVETPS 877
+ YLH I H DLKP N++L V + DFGLA +
Sbjct: 124 LNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---- 176
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILL 912
I GT +VAPE + D++S G++
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 2e-15
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 46/234 (19%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V G A+K+L + K + E L+N RH L +
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---------A 818
S +H V EY G L H + R +
Sbjct: 215 ---YSFQTHDRLC--FVMEYANGGEL---FFH------------LSRERVFSEDRARFYG 254
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+I A++YLH +++ DLK N++LD D + DFGL K + ++ ++
Sbjct: 255 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGAT 305
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFN 927
GT Y+APE ++ A D + G+++ EM + P + +F
Sbjct: 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 359
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 2e-15
Identities = 49/227 (21%), Positives = 86/227 (37%), Gaps = 48/227 (21%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRN 762
+ +IG+G+FG V + A+K+L+ + ++ F E + +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
++++ + D + +V EYM G L ++L+ + A
Sbjct: 131 VVQLF--YAFQDD---RYLYMVMEYMPGGDL---------------VNLMSNYDVPEKWA 170
Query: 823 --Y------AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDD 872
Y A++ +H IH D+KP N+LLD H+ DFG + +
Sbjct: 171 RFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNKEGMVR 225
Query: 873 VETPSSSIGIKGTVGYVAPE----YGMGSEASMAGDVYSFGILLLEM 915
+T GT Y++PE G D +S G+ L EM
Sbjct: 226 CDTAV------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 3e-15
Identities = 50/219 (22%), Positives = 81/219 (36%), Gaps = 46/219 (21%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--FKSFVAECEALRNIRHR-NLIKIIT 768
+G+G F V + I G A K L R+G + E L + +I +
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH----DVCDLSLIQRLHIAIDIAYA 824
+ + L+ EY G + + DV L + Q I
Sbjct: 97 VYENTSEI-----ILILEYAAGGEIFSLCLPELAEMVSENDVIRL-IKQ-------ILEG 143
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHD------MVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ YLH + I+H DLKP N+LL + DFG+++ + +
Sbjct: 144 VYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIV---DFGMSRKI---------GHAC 188
Query: 879 SI-GIKGTVGYVAPEYGMGSEASMAGDVYSFG----ILL 912
+ I GT Y+APE + A D+++ G +LL
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL 227
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 4e-15
Identities = 84/464 (18%), Positives = 150/464 (32%), Gaps = 73/464 (15%)
Query: 198 LKVINVEENRLS-GRIPNTLGQLRNSFYLNIAGNQFS----GNVPPSIYNLSSLELLYLR 252
++ ++++ LS R L L+ + + + ++ ++ +L L LR
Sbjct: 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64
Query: 253 GNRL--IGSLPIDIGLTLP--KLTNFVIAENNFS----GPIPNSFSNTSNLVMLDLNLN- 303
N L +G + GL P K+ + + G + ++ L L L+ N
Sbjct: 65 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 124
Query: 304 -------LFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYG 356
L + RL+ L L +L + L + L L +
Sbjct: 125 LGDAGLQLLCEGLLDPQCRLEKLQ---LEYCSLSAASCEPLASV--LRAKPDFKELTVSN 179
Query: 357 NRFG--GV--LPHSIANLSTTTVQINMGRNQIS----GTIPSGIGNLVNLNGFGIDLNQL 408
N GV L + + + + ++ + + + +L + N+L
Sbjct: 180 NDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239
Query: 409 TGTIPHEIGK-----LTNLQLLYLDFNLLE----GSIPFSLGNLTLLTELELQSNYLQGN 459
E+ + L+ L++ + G + L L EL L N L
Sbjct: 240 GDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299
Query: 460 IPSSLG-----NCRSLLSLNVSQNKLTG----ALPKQIFNITTLSLYLDLSNNFLND--- 507
L L SL V T + L L +SNN L D
Sbjct: 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLL-ELQISNNRLEDAGV 358
Query: 508 ---SLPLEVGNLQNLVELDISRNQVSGE----IPATLSACTSLEYLNLSYNSF-RGGIPL 559
L L L ++ VS + ATL A SL L+LS N GI
Sbjct: 359 RELCQGLGQPG-SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ 417
Query: 560 SLSSLKS----VKVLDLSSNNLSGQIPKYL----ENLSFLEYLN 595
+ S++ ++ L L S ++ L ++ L ++
Sbjct: 418 LVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 461
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-14
Identities = 65/416 (15%), Positives = 122/416 (29%), Gaps = 64/416 (15%)
Query: 244 SSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFS----GPIPNSFSNTSNLVMLD 299
++ L ++ L + ++ L + + + + I ++ L L+
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 300 LNLNLFSGKVPINFSRL-----QNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGL 354
L N + + L L L L + L L L L
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL--SSTLRTLPTLQELHL 120
Query: 355 YGNRFGGV----LPHSIANLSTTTVQINMGRNQISGTIPSGIG-------NLVNLNGFGI 403
N G L + + ++ + +S + + L +
Sbjct: 121 SDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELT---V 177
Query: 404 DLNQLTGTIPHEIGKL-----TNLQLLYLDFNLL--EGSIPFS--LGNLTLLTELELQSN 454
N + + + L+ L L+ + + + + L EL L SN
Sbjct: 178 SNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 237
Query: 455 YLQGN-----IPSSLGNCRSLLSLNVSQNKLT----GALPKQIFNITTLSLYLDLSNNFL 505
L P L L +L + + +T G L + + +L L L+ N L
Sbjct: 238 KLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLK-ELSLAGNEL 296
Query: 506 ND------SLPLEVGNLQNLVELDISRNQVSGE----IPATLSACTSLEYLNLSYNSFR- 554
D L Q L L + + + L+ L L +S N
Sbjct: 297 GDEGARLLCETLLEPGCQ-LESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355
Query: 555 -GGIPLS---LSSLKSVKVLDLSSNNLSGQ----IPKYLENLSFLEYLNISSNHFE 602
G L ++VL L+ ++S + L L L++S+N
Sbjct: 356 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 65/361 (18%), Positives = 121/361 (33%), Gaps = 49/361 (13%)
Query: 72 HRHQRVTKLYLRNQSIG----GILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRL----- 122
++ KL L+N + G+LS + L L+ + L+DN +
Sbjct: 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141
Query: 123 SRLDTLMLANNSFSGK----IPTNLSGCSNLINFLAHGNNL----VGQIAANIGYNWMRL 174
RL+ L L S S + + L + N++ V + + + +L
Sbjct: 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQL 201
Query: 175 EKLSIADNHLTGQ----LPASIGNLSVLKVINVEENRLSGR-----IPNTLGQLRNSFYL 225
E L + +T L + + + L+ + + N+L P L L
Sbjct: 202 EALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTL 261
Query: 226 NIAGNQFS----GNVPPSIYNLSSLELLYLRGNRL--IGSLPIDIGLTLP--KLTNFVIA 277
I + G++ + SL+ L L GN L G+ + L P +L + +
Sbjct: 262 WIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321
Query: 278 ENNFSG----PIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRL-----QNLSWLLLAGNN 328
+F+ + + L+ L ++ N + L L LA +
Sbjct: 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381
Query: 329 LGNGAANDLDFITPLTNCSKLIALGLYGNRFG--GV--LPHSIANLSTTTVQINMGRNQI 384
+ + + + L L L L L N G G+ L S+ Q+ +
Sbjct: 382 VSDSSCSSL--AATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 439
Query: 385 S 385
S
Sbjct: 440 S 440
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 78.3 bits (192), Expect = 5e-15
Identities = 40/237 (16%), Positives = 75/237 (31%), Gaps = 19/237 (8%)
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNL-- 422
+ + ++ + L +L P L +
Sbjct: 331 CVLLKDRPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIIL 390
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELEL-----QSNYLQGNIPSSLGNCRSLLSLNVSQ 477
+ LD L E L + + + + L+++
Sbjct: 391 LMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAH 450
Query: 478 NKLTGALPKQIFNITTLSL--YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA 535
LT + ++ L L +LDLS+N L +LP + L+ L L S N + +
Sbjct: 451 KDLT-----VLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG 503
Query: 536 TLSACTSLEYLNLSYNSFRG-GIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFL 591
++ L+ L L N + L S + +L+L N+L Q E L+ +
Sbjct: 504 -VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC-QEEGIQERLAEM 558
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 74.4 bits (182), Expect = 8e-14
Identities = 37/226 (16%), Positives = 79/226 (34%), Gaps = 20/226 (8%)
Query: 403 IDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPS 462
+ L + L L + L + L ELE ++ + I
Sbjct: 332 VLLKDRPECWCRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL 390
Query: 463 SLGNCRSLLSLNVSQNKLTGALPKQIFNITTL----SLYLDLSNNFLNDSLPLEVGNLQN 518
+ LL + + + + + YLD + + +
Sbjct: 391 LMRALDPLLYEKETLQYFS--------TLKAVDPMRAAYLDDLRSKFLLENSVLKMEYAD 442
Query: 519 LVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLS 578
+ L ++ ++ + L + +L+LS+N R +P +L++L+ ++VL S N L
Sbjct: 443 VRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALE 499
Query: 579 GQIPKYLENLSFLEYLNISSNHFEG--KVPTKGVFSNKTRISLSGN 622
+ + NL L+ L + +N + + ++L GN
Sbjct: 500 -NVDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 62.9 bits (152), Expect = 3e-10
Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 14/215 (6%)
Query: 91 LSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLI 150
L +L+ + E+ L L N + +
Sbjct: 341 WCRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCL----LTIILLMRAL 395
Query: 151 NFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSG 210
+ L + + + + MR L + + + ++V+++ L+
Sbjct: 396 DPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT- 454
Query: 211 RIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGL-TLP 269
+ + L QL +L+++ N+ +PP++ L LE+L N + ++ G+ LP
Sbjct: 455 VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNA-LENVD---GVANLP 508
Query: 270 KLTNFVIAENNFSG-PIPNSFSNTSNLVMLDLNLN 303
+L ++ N + LV+L+L N
Sbjct: 509 RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 6e-07
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
+ L ++ N L LP ++ L L+V+ +N L + + L L + N+
Sbjct: 464 LVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRL 520
Query: 233 SGNVP--PSIYNLSSLELLYLRGNRL--IGSLPIDIGLTLPKLT 272
+ + L LL L+GN L + + LP ++
Sbjct: 521 Q-QSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 5e-15
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 61/230 (26%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFV----------AECEAL 755
F +G GSFG V+ G A+KVL K V E L
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-------KEIVVRLKQVEHTNDERLML 60
Query: 756 RNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQH---DVCDLSLI 812
+ H +I++ + D+ ++ +Y++ G L + Q V
Sbjct: 61 SIVTHPFIIRMW--GTFQDA---QQIFMIMDYIEGGEL--FSLLRKSQRFPNPVA----- 108
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFL----Y 866
+ + A ++ A+EYLH II+ DLKP N+LLD + H+ DFG AK++ Y
Sbjct: 109 -KFYAA-EVCLALEYLHSK---DIIYRDLKPENILLDKN--GHIKITDFGFAKYVPDVTY 161
Query: 867 T-CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
T C GT Y+APE + + D +SFGIL+ EM
Sbjct: 162 TLC---------------GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 7e-15
Identities = 56/258 (21%), Positives = 92/258 (35%), Gaps = 67/258 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
IG GS+G V +VA+K + F+ + E L + H +++K
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILR----VFEDLIDCKRILREIAILNRLNHDHVVK 116
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLI----QRL---H 816
++ I D F +V E D + L H
Sbjct: 117 VLDIVIPKDVE--KFDELYVVLEIAD-----------------SDFKKLFRTPVYLTELH 157
Query: 817 IAIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
I + Y ++Y+H I+H DLKP+N L++ D V DFGLA+ + + +
Sbjct: 158 IKT-LLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
Query: 873 VETPSSSIGIKGTV--------------GYV------APEYGMGSEA-SMAGDVYSFGIL 911
+ P S + G+V APE + E + A DV+S G +
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273
Query: 912 LLEMFIRKRPTDSMFNDG 929
E+ + + D
Sbjct: 274 FAELLNMIKENVAYHADR 291
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 41/220 (18%), Positives = 81/220 (36%), Gaps = 13/220 (5%)
Query: 387 TIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP-FSLGNLTL 445
IPS + L + L H L N+ +Y+ ++ + S NL+
Sbjct: 25 RIPSLPPSTQTLK---LIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSK 81
Query: 446 LTELELQSNYLQGNIPSS-LGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNF 504
+T +E+++ I L L L + L T + L++++N
Sbjct: 82 VTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNP 141
Query: 505 LNDSLPLEV-GNLQN-LVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIP-LSL 561
S+P+ L N + L + N + + T L+ + L+ N + I +
Sbjct: 142 YMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAF 200
Query: 562 SSLKSV-KVLDLSSNNLSGQIPKYLENLSFLEYLNISSNH 600
+ S +LD+S +++ +P L L+ L +
Sbjct: 201 GGVYSGPSLLDVSQTSVT-ALPSKG--LEHLKELIARNTW 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 21/217 (9%)
Query: 268 LPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPIN-FSRLQNLSWLLLAG 326
P + E + ++FSN N+ + +++++ ++ + F L ++ + +
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 327 NNLGNGAANDLDFITP--LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQI 384
+L +I P L L LG++ + + + + N
Sbjct: 90 TR-------NLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPY 142
Query: 385 SGTIPSGI-GNLVNLNGFGIDL--NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP---F 438
+IP L N + L N T ++ T L +YL+ N I F
Sbjct: 143 MTSIPVNAFQGLCNETLT-LKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAF 200
Query: 439 SLGNLTLLTELELQSNYLQGNIPS-SLGNCRSLLSLN 474
G + + L++ + +PS L + + L++ N
Sbjct: 201 G-GVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARN 235
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 3e-09
Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 62/252 (24%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEV-GRLSRLDTLMLANNSF 135
L L + I S NL + I ++ + + LS++ + + N
Sbjct: 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT-- 90
Query: 136 SGKIPTNLSGCSNLINFLAHG--NNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPA--S 191
+ ++ L L+ L I + L P
Sbjct: 91 ------------RNLTYIDPDALKELP------------LLKFLGIFNTGLK-MFPDLTK 125
Query: 192 IGNLSVLKVINVEENRLSGRIP-NTLGQLRN-SFYLNIAGNQFSGNVPPSIYNLSSLELL 249
+ + + ++ + +N IP N L N + L + N F+ +V +N + L+ +
Sbjct: 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAV 184
Query: 250 YLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSN-TSNLVMLDLNLNLFSGK 308
YL N+ + + ++F S +LD++ +
Sbjct: 185 YLNKNKYLTVID------------------------KDAFGGVYSGPSLLDVSQTSVT-A 219
Query: 309 VPIN-FSRLQNL 319
+P L+ L
Sbjct: 220 LPSKGLEHLKEL 231
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 16/169 (9%)
Query: 468 RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISR 526
S +L + + L +P F+ + +S + L NL + ++I
Sbjct: 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 527 NQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIP--LSLSSLKSVKVLDLSSNNLSGQIP- 582
+ I L L++L + + P + S +L+++ N IP
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPV 148
Query: 583 ---KYLENLSFLEYLNISSNHFEGKVPTKGVF--SNKTRISLSGNGKLC 626
+ L N L + +N F V F + + L+ N L
Sbjct: 149 NAFQGLCNE--TLTLKLYNNGFT-SVQ-GYAFNGTKLDAVYLNKNKYLT 193
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 1e-14
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 50/222 (22%)
Query: 711 MIGQGSFGFVY---RGILGEGGLLVAVKVLNLTRKGAFKSFV-----AECEALRNIRHRN 762
++GQGSFG V+ + + L A+KVL K+ + + R+I
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLK-------KATLKVRDRVRTKMERDI---- 79
Query: 763 LIK-----IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRL 815
L++ I+ + + + G + L+ ++++ G L L + DV +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRLSKEVMFTEEDV-------KF 130
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDV 873
++A ++A A+++LH II+ DLKP N+LLD + H+ DFGL+K +D
Sbjct: 131 YLA-ELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSKE----SIDHE 180
Query: 874 ETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
+ S GTV Y+APE + + D +SFG+L+ EM
Sbjct: 181 KKAYS---FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-14
Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 61/247 (24%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVK-VLNLTRKGAFKSFVAECEALRNIRHRNLIKIITI- 769
+G GSFG V E G A+K VL R +K+ E + ++ + H N+IK++
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKN--RELDIMKVLDHVNIIKLVDYF 69
Query: 770 ----CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQR-----LHIAID 820
NG + L++I LH +
Sbjct: 70 YTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLK 129
Query: 821 --------------------IAYAIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDF 859
+ A+ ++H I H D+KP N+L++ D + DF
Sbjct: 130 SFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDF 186
Query: 860 GLAKFLYTCQVDDVETPSSSIGIKGTVGYV------APEYGMGSEA-SMAGDVYSFGILL 912
G AK L + + S V Y+ APE +G+ + + D++S G +
Sbjct: 187 GSAKKL-------IPSEPS-------VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232
Query: 913 LEMFIRK 919
E+ + K
Sbjct: 233 GELILGK 239
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 2e-14
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
IG G+ G V VA+K L+ F++ E ++ + H+N+I
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLS----RPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
++ + + + +F+ LV E M + L +L + ++ +
Sbjct: 126 LLNVFTPQKTLE-EFQDVYLVMELM-----DANLCQVIQM----ELDHERMSYLLYQMLC 175
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
I++LH IIH DLKPSN+++ D + DFGLA+ T +S +
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----------TAGTSFMMT 221
Query: 884 GTVG---YVAPEYGMGSEASMAGDVYSFGILLLEMFIRK 919
V Y APE +G D++S G ++ EM K
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 30/258 (11%)
Query: 679 HKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEG-----GLLVA 733
+SS + +QF + A + IGQG FG +Y +
Sbjct: 11 RQSSAKRHLAEQFAVGEIITDMAA-AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCV 69
Query: 734 VKVLN-----LTRKGAFKSFVAECEALRNIRHRNLIKIITICS-----SIDSHGVDFKAL 783
VKV L + F A+ E ++ +K + + D +G ++ +
Sbjct: 70 VKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFM 129
Query: 784 VYEYMQNG-SLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLK 842
+ + G L++ ++ +N + S L +++ I +EY+H H +HGD+K
Sbjct: 130 IMDRF--GSDLQK-IYEANAKR----FSRKTVLQLSLRILDILEYIHEHE---YVHGDIK 179
Query: 843 PSNVLLD--HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEAS 900
SN+LL+ + ++ D+GLA V GT+ + + + G S
Sbjct: 180 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPS 239
Query: 901 MAGDVYSFGILLLEMFIR 918
GD+ G +++ ++
Sbjct: 240 RRGDLEILGYCMIQ-WLT 256
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 4e-14
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 54/226 (23%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G++G V I G VA+K L+ F+S + E L++++H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS----RPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLH---HSNDQHDVCDLSLIQRLHIAID 820
++ + + S +F LV +M + L + + Q L
Sbjct: 88 LLDVFTPASSLR-NFYDFYLVMPFM-----QTDLQKIMGLKFSEEKIQYLVYQMLK---- 137
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
++Y+H ++H DLKP N+ ++ D + DFGLA+ D T
Sbjct: 138 ---GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMT----- 181
Query: 881 GIKGTVGYV------APEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
GYV APE + + D++S G ++ EM K
Sbjct: 182 ------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 6e-14
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 36/216 (16%)
Query: 711 MIGQGSFGFVY---RGILGEGGLLVAVKVLN----LTRKGAFKSFVAECEALRNIRHRNL 763
++G+G +G V+ + G + A+KVL + AE L ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN--DQHDVCDLSLIQRLHIAIDI 821
+ +I + + G + L+ EY+ G L L + ++A +I
Sbjct: 84 VDLI---YAFQTGGKLY--LILEYLSGGELFMQLEREGIFMEDTA-------CFYLA-EI 130
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSS 879
+ A+ +LH II+ DLKP N++L+H HV DFGL K + D +
Sbjct: 131 SMALGHLHQK---GIIYRDLKPENIMLNHQ--GHVKLTDFGLCKE----SIHDGTVTHT- 180
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEM 915
GT+ Y+APE M S + A D +S G L+ +M
Sbjct: 181 --FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDM 214
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 7e-14
Identities = 59/233 (25%), Positives = 96/233 (41%), Gaps = 67/233 (28%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G++G V + GL VAVK L+ F+S + E L++++H N+I
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLS----RPFQSIIHAKRTYRELRLLKHMKHENVIG 92
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLI---QRL---HI 817
++ + + S +F LV M DL+ I Q+L H+
Sbjct: 93 LLDVFTPARSLE-EFNDVYLVTHLMG-----------------ADLNNIVKCQKLTDDHV 134
Query: 818 AIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
+ Y ++Y+H IIH DLKPSN+ ++ D + DFGLA+ D
Sbjct: 135 QF-LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADE 185
Query: 874 ETPSSSIGIKGTVGYV------APEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
T GYV APE + + D++S G ++ E+ +
Sbjct: 186 MT-----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 9e-14
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 51/236 (21%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIKII 767
++G+G+FG V G A+K+L + K V E L+N RH L +
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---------A 818
+ +H V EY G L H + R +
Sbjct: 72 ---YAFQTHDRLC--FVMEYANGGEL---FFH------------LSRERVFTEERARFYG 111
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETP 876
+I A+EYLH +++ D+K N++LD D H+ DFGL K + +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKD--GHIKITDFGLCK-------EGISDG 159
Query: 877 SSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFN 927
++ GT Y+APE ++ A D + G+++ EM + P + +F
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 46/244 (18%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
IG+GS+G+VY VA+K +N F+ + E L ++ +I+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVN----RMFEDLIDCKRILREITILNRLKSDYIIR 89
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLH---HSNDQHDVCDLSLIQRLHIAID 820
+ + D F +V E + L + L+ I +
Sbjct: 90 LYDLIIPDDLL--KFDELYIVLEIA-----DSDLKKLFKTPI-----FLTEEHIKTILYN 137
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
+ ++H + IIH DLKP+N LL+ D V DFGLA+ + + + ++
Sbjct: 138 LLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194
Query: 881 GIKGTV---------GYV------APEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDS 924
G +V APE + E + + D++S G + E+ + +
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254
Query: 925 MFND 928
+
Sbjct: 255 DPTN 258
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-13
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 55/229 (24%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
IG+G++G V + VA+K ++ F+ E + L RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS-----PFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLH---HSN---DQHDVCDLSLIQRLHI 817
I I + K +V + M E L+ + + H L Q L
Sbjct: 90 INDIIRAPTIE--QMKDVYIVQDLM-----ETDLYKLLKTQHLSNDH--ICYFLYQILR- 139
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
++Y+H ++H DLKPSN+LL+ + DFGLA+ D T
Sbjct: 140 ------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR---VADPDHDHTGF 187
Query: 878 SSIGIKGTVGYV------APEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
+ YV APE + S+ + + D++S G +L EM +
Sbjct: 188 LT-------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-13
Identities = 53/334 (15%), Positives = 88/334 (26%), Gaps = 65/334 (19%)
Query: 312 NFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL- 370
FS ++ S L + + + L + + L GN G ++
Sbjct: 3 RFS-IEGKS---LKLDAITTEDEKSV--FAVLLEDDSVKEIVLSGNTIGTEAARWLSENI 56
Query: 371 --STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLD 428
L L + K L + L
Sbjct: 57 ASKKDLEIAEFSDIFTGRVKDEIPEALRLLL--------------QALLKCPKLHTVRLS 102
Query: 429 FNLL--EGSIPFS--LGNLTLLTELELQSNYL-------------QGNIPSSLGNCRSLL 471
N P L T L L L +N L + + N L
Sbjct: 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR 162
Query: 472 SLNVSQNKLTG----ALPKQIFNITTLSLYLDLSNNFLND---SLPLEVG--NLQNLVEL 522
S+ +N+L K + L + + N + L G Q L L
Sbjct: 163 SIICGRNRLENGSMKEWAKTFQSHRLLH-TVKMVQNGIRPEGIEHLLLEGLAYCQELKVL 221
Query: 523 DISRNQVSGE----IPATLSACTSLEYLNLSYNSFR--GGIP----LSLSSLKSVKVLDL 572
D+ N + + L + +L L L+ G S ++ L L
Sbjct: 222 DLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281
Query: 573 SSNNLSGQIPKYL-----ENLSFLEYLNISSNHF 601
N + + L E + L +L ++ N F
Sbjct: 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 1e-13
Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 67/233 (28%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G++G V + G G VA+K L F+S + E L+++RH N+I
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLY----RPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 766 IITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLI---QRL---HI 817
++ + + ++ DF LV +M DL + ++L I
Sbjct: 89 LLDVFTPDETLD-DFTDFYLVMPFMG-----------------TDLGKLMKHEKLGEDRI 130
Query: 818 AIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDV 873
+ Y + Y+H IIH DLKP N+ ++ D + DFGLA+ Q D
Sbjct: 131 QF-LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSE 181
Query: 874 ETPSSSIGIKGTVGYV------APEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
T GYV APE + + D++S G ++ EM K
Sbjct: 182 MT-----------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 1e-13
Identities = 58/240 (24%), Positives = 96/240 (40%), Gaps = 60/240 (25%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-------HRNLI 764
+G+G++G V++ I G +VAVK + AF++ R I H N++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIF----DAFQNSTDAQRTFREIMILTELSGHENIV 72
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI---QRL---HIA 818
++ + + + V LV++YM+ DL + L H
Sbjct: 73 NLLNVLRADNDRDV---YLVFDYME-----------------TDLHAVIRANILEPVHKQ 112
Query: 819 IDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
+ Y I+YLH ++H D+KPSN+LL+ + V DFGL++ +
Sbjct: 113 Y-VVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNN 168
Query: 875 TPSSSIGIKGTV--------GYV------APEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
P S YV APE +GS + D++S G +L E+ K
Sbjct: 169 IPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 72.3 bits (177), Expect = 2e-13
Identities = 53/275 (19%), Positives = 91/275 (33%), Gaps = 81/275 (29%)
Query: 710 NMIGQGSFGFVYRGIL-----GEGGLLVAVKVLN-LTRKGAFKSFVAECEAL------RN 757
+G+G+FG V VAVK+L ++ ++E + L N
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 758 I--------RHRNLIKIIT----------------------------------------- 768
+ + + +I
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 769 -ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD-LSLIQRLHIAIDIAYAIE 826
+ +DS + +++ SL + + D L+L + + +A +E
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKG 884
+L IH DL N+LL V + DFGLA+ +Y D + +K
Sbjct: 208 FL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK---DPDYVRKGDARLPLKW 261
Query: 885 TVGYVAPE---YGMGSEASMAGDVYSFGILLLEMF 916
APE + + S DV+SFG+LL E+F
Sbjct: 262 M----APETIFDRVYTIQS---DVWSFGVLLWEIF 289
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 2e-13
Identities = 47/205 (22%), Positives = 73/205 (35%), Gaps = 40/205 (19%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP--FSLGNLTLLTELELQSNYLQGNIPS- 462
QL +P + + LL L N L + ++ LT L L L N+L I S
Sbjct: 28 QQLP-NVPQSL--PSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSE 82
Query: 463 SLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVEL 522
+ +L L++S N L L + +F+ +LQ L L
Sbjct: 83 AFVPVPNLRYLDLSSNHLH-TLDEFLFS------------------------DLQALEVL 117
Query: 523 DISRNQVSGEIPA-TLSACTSLEYLNLSYN---SFRGGIPLSLSSLKSVKVLDLSSNNLS 578
+ N + + L+ L LS N F + + L + +LDLSSN L
Sbjct: 118 LLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176
Query: 579 GQIPKYLENLSFL--EYLNISSNHF 601
L+ L L + +N
Sbjct: 177 KLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 17/174 (9%)
Query: 309 VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIA 368
VP + + L L+ NNL L T + L +L L N + +
Sbjct: 33 VPQSLPS--YTALLDLSHNNLSR-----LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFV 85
Query: 369 NLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLY 426
+ +++ N + T+ + +L L + N + + + LQ LY
Sbjct: 86 PV-PNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLY 142
Query: 427 LDFNLLEGSIPF----SLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVS 476
L N + P L L L+L SN L+ + L + + +
Sbjct: 143 LSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 4e-07
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 8/136 (5%)
Query: 173 RLEKLSIADNHLTGQLPASI-GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQ 231
L L ++ NHL + + + L+ +++ N L L+ L + N
Sbjct: 65 NLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNH 123
Query: 232 FSGNVPPSI-YNLSSLELLYLRGNRLIGSLPIDI---GLTLPKLTNFVIAENNFSGPIPN 287
V + +++ L+ LYL N++ P+++ G LPKL ++ N
Sbjct: 124 IV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLT 181
Query: 288 SFSNTSNLVMLDLNLN 303
V L L+
Sbjct: 182 DLQKLPAWVKNGLYLH 197
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 101 LRLIDLADNNFYGNIPHEV--GRLSRLDTLMLANNSFSGKIPTN-LSGCSNLINFLAHGN 157
L+DL+ NN + E RL+ L +L+L++N + I + NL N
Sbjct: 41 TALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSN 98
Query: 158 NLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASI-GNLSVLKVINVEENRLSGRIPN-- 214
+L + + + LE L + +NH+ + + +++ L+ + + +N++S R P
Sbjct: 99 HLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVEL 155
Query: 215 --TLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLEL--LYLRGNRL 256
+L L+++ N+ + L + LYL N L
Sbjct: 156 IKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 2e-13
Identities = 46/235 (19%), Positives = 91/235 (38%), Gaps = 58/235 (24%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVA------ECEALRNIRHRNLIK 765
+G G G V+ + + VA+K K + E + +R + H N++K
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIK------KIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 766 IITI-------CSSIDSHGVDFKA--LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
+ I + + + +V EYM+ D +V + + H
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-----------DLANVLEQGPLLEEH 121
Query: 817 IAIDIAY----AIEYLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVD 871
+ Y ++Y+H ++H DLKP+N+ ++ D+V +GDFGLA+ +D
Sbjct: 122 ARL-FMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLAR-----IMD 172
Query: 872 DVETPSSSIGIKGTVGYV------APEYGMGSEA-SMAGDVYSFGILLLEMFIRK 919
+ + + + +P + + A D+++ G + EM K
Sbjct: 173 PHYSHKGHL----S-EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 72.4 bits (177), Expect = 4e-13
Identities = 67/334 (20%), Positives = 115/334 (34%), Gaps = 90/334 (26%)
Query: 680 KSSVTSPMEQQFPIVSYAELSKATGEFSTSN-----MIGQGSFGFVYRGILGEGGLLVAV 734
+P E+ +S + + ++ ++G+GSFG V L AV
Sbjct: 312 GQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAV 371
Query: 735 KVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSH--GVDFKA---------L 783
K+L +K + E + + + +
Sbjct: 372 KIL---KKDVVIQD-DDVECTMVEKR--------VLALPGKPPFLTQLHSCFQTMDRLYF 419
Query: 784 VYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---------AIDIAYAIEYLHHHCQP 834
V EY+ G L ++H IQ++ A +IA + +L
Sbjct: 420 VMEYVNGGDL---MYH------------IQQVGRFKEPHAVFYAAEIAIGLFFLQSK--- 461
Query: 835 PIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPE 892
II+ DLK NV+LD + H+ DFG+ K + D T + GT Y+APE
Sbjct: 462 GIIYRDLKLDNVMLDSE--GHIKIADFGMCKE----NIWDGVTTKT---FCGTPDYIAPE 512
Query: 893 YGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMF----NDGLTIHEFAMKALPQR 943
+ D ++FG+LL EM + P D +F + + + +
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKE 568
Query: 944 VIEIVDPLLLLEVRTNNSKNPC---GDGRGGIEE 974
+ I L+ +K+P G G G +
Sbjct: 569 AVAICKGLM--------TKHPGKRLGCGPEGERD 594
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 6e-13
Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 62/242 (25%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL---NLTRKGAFKSFVAECEALRNIRHRNLIK-- 765
+IG+GSFG V + AVKVL + +K K ++E RN+ L+K
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE----RNV----LLKNV 96
Query: 766 ----IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---- 817
++ + S + + V +Y+ G L +H +QR
Sbjct: 97 KHPFLVGLHFSFQTADKLY--FVLDYINGGEL---FYH------------LQRERCFLEP 139
Query: 818 -----AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQV 870
A +IA A+ YLH I++ DLKP N+LLD H+ DFGL K
Sbjct: 140 RARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQ--GHIVLTDFGLCK------- 187
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSM 925
+++E S++ GT Y+APE D + G +L EM P T M
Sbjct: 188 ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
Query: 926 FN 927
++
Sbjct: 248 YD 249
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 6e-13
Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 29/233 (12%)
Query: 704 GEFSTSNMIGQGSFGFVYRGI--------LGEGGLLVAVKV----LNLTRKGAFKSFVAE 751
++ + + + G +Y G ++K+ L + F A+
Sbjct: 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAK 101
Query: 752 CEALRNIRHRNLIKIITICSSIDS--HGVDFKALVYEYMQNG-SLEEWLHHSNDQHDVCD 808
+ + ++ I + + H ++ LV + G SL+ L S
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKH----V 155
Query: 809 LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFL 865
LS L +A + A+E+LH + +HG++ N+ + D V + +G A
Sbjct: 156 LSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQV-TLAGYGFAFRY 211
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918
S +G + +++ + G S D+ S G +L+ ++
Sbjct: 212 CPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLK-WLY 263
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 6e-13
Identities = 53/224 (23%), Positives = 82/224 (36%), Gaps = 26/224 (11%)
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
P + L+ + L N+ + N+
Sbjct: 13 FPDDA--FAETIKANLKKKSV-TDAVTQNELNSIDQIIA---NNSDIKSVQ-GIQYLPNV 65
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
L L N + L NL++L+L GN L + D +T L L L
Sbjct: 66 RYLALGGNKLH-DISA-LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE------LVLV 117
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPH 414
N+ LP + + T +N+ NQ+ ++P G+ L NL + NQL ++P
Sbjct: 118 ENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ-SLPE 174
Query: 415 EI-GKLTNLQLLYLDFNLLEGSIP---FSLGNLTLLTELELQSN 454
+ KLT L+ L L N L+ S+P F LT L + L N
Sbjct: 175 GVFDKLTQLKDLRLYQNQLK-SVPDGVFD--RLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 40/215 (18%)
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
+L + + L ++ ++ +++ + + ++ + L L GN
Sbjct: 24 ANLKKKSVT-DAV-TQNELNSIDQIIANNSDIKSVQG--IQYLPNVRY------LALGGN 73
Query: 358 RFG--GVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPH 414
+ L L+ T + + NQ+ ++P+G+ L NL + NQL ++P
Sbjct: 74 KLHDISALKE----LTNLT-YLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQ-SLPD 126
Query: 415 EI-GKLTNLQLLYLDFNLLEGSIP---FSLGNLTLLTELELQSNYLQGNIPS----SLGN 466
+ KLTNL L L N L+ S+P F LT LTEL+L N LQ ++P L
Sbjct: 127 GVFDKLTNLTYLNLAHNQLQ-SLPKGVFD--KLTNLTELDLSYNQLQ-SLPEGVFDKLTQ 182
Query: 467 CRSLLSLNVSQNKLTGALPKQIF----NITTLSLY 497
L L + QN+L ++P +F ++ + L+
Sbjct: 183 ---LKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLH 213
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 25/159 (15%)
Query: 472 SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG 531
++ VS P F T +L + + L ++ ++ + + +
Sbjct: 2 TITVSTPIKQ-IFPDDAFAETI---KANLKKKSVT-DAVTQNE-LNSIDQIIANNSDIKS 55
Query: 532 E--IPATLSACTSLEYLNLSYNSFRGGIPLSLS---SLKSVKVLDLSSNNLSGQIPKYLE 586
I ++ YL L N +S L ++ L L+ N L +
Sbjct: 56 VQGIQYL----PNVRYLALGGNKLH-----DISALKELTNLTYLILTGNQLQSLPNGVFD 106
Query: 587 NLSFLEYLNISSNHFEGKVPTKGVF---SNKTRISLSGN 622
L+ L+ L + N + +P GVF +N T ++L+ N
Sbjct: 107 KLTNLKELVLVENQLQ-SLPD-GVFDKLTNLTYLNLAHN 143
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 8e-13
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 50/225 (22%)
Query: 711 MIGQGSFGFVY--RGILGEG-GLLVAVKVLN----LTRKGAFKSFVAECEALRNIRHRNL 763
++G G++G V+ R I G G L A+KVL + + + E + L +IR
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI------ 817
+ +T+ + + L+ +Y+ G L H + +
Sbjct: 121 L--VTLHYAFQTETKLH--LILDYINGGEL---FTH------------LSQRERFTEHEV 161
Query: 818 ---AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDD 872
+I A+E+LH II+ D+K N+LLD + HV DFGL+K V D
Sbjct: 162 QIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSN--GHVVLTDFGLSKE----FVAD 212
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEA--SMAGDVYSFGILLLEM 915
+ GT+ Y+AP+ G ++ A D +S G+L+ E+
Sbjct: 213 ETERAYDFC--GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL 255
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 1e-12
Identities = 54/231 (23%), Positives = 79/231 (34%), Gaps = 52/231 (22%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVK-----VLNLTRKGAFKSFVA------ECEALRNIRH 760
I GS+G V G+ EG VA+K V + E L + H
Sbjct: 30 ISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 761 RNLIKIITICSSIDSHGVDFKA--LVYEYMQNGSLEEWLH---HSNDQHDVCDLSLIQRL 815
N++ + I + LV E M L H +S
Sbjct: 89 PNILGLRDIFVHFEEP--AMHKLYLVTELM-----RTDLAQVIHDQRI----VISPQHIQ 137
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
+ I + LH + ++H DL P N+LL + + DF LA+ D +T
Sbjct: 138 YFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKT 191
Query: 876 PSSSIGIKGTVGYV------APEYGMGS-EASMAGDVYSFGILLLEMFIRK 919
YV APE M + D++S G ++ EMF RK
Sbjct: 192 -----------HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-12
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 62/266 (23%)
Query: 681 SSVTSPMEQQFPIVSYAELSKATGEFSTSN-----MIGQGSFGFVYRGILGEGGLLVAVK 735
++ S +E++ ++ E KA+ + +IG+GS+ V L + + A++
Sbjct: 24 GAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMR 83
Query: 736 VLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKA---------LVYE 786
V+ +K + + + +++ + + + V + V E
Sbjct: 84 VV---KK---ELVNDDEDIDWVQTEKHVFEQASNHPFL----VGLHSCFQTESRLFFVIE 133
Query: 787 YMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---------AIDIAYAIEYLHHHCQPPII 837
Y+ G L + H +QR + +I+ A+ YLH II
Sbjct: 134 YVNGGDL---MFH------------MQRQRKLPEEHARFYSAEISLALNYLHER---GII 175
Query: 838 HGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGM 895
+ DLK NVLLD + H+ D+G+ K + + ++ GT Y+APE
Sbjct: 176 YRDLKLDNVLLDSE--GHIKLTDYGMCK-------EGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 896 GSEASMAGDVYSFGILLLEMFIRKRP 921
G + + D ++ G+L+ EM + P
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSP 252
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
LDL + F L L+WL L N L +A D +T L LGL N
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGT------LGLANN 93
Query: 358 RFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI 416
+ LP + + T ++ +G NQ+ ++PSG+ L L ++ NQL +IP
Sbjct: 94 QLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGA 150
Query: 417 -GKLTNLQLLYLDFNLLEGSIPF-SLGNLTLLTELELQSN 454
KLTNLQ L L N L+ S+P + L L + L N
Sbjct: 151 FDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 4e-11
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ---GNIPSSLGNC 467
++P I + + L L L + LT LT L L N LQ + L
Sbjct: 28 SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTE- 84
Query: 468 RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISR 526
L +L ++ N+L +LP +F+ T L L N L SLP V L L EL ++
Sbjct: 85 --LGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNT 140
Query: 527 NQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSN 575
NQ+ IPA T+L+ L+LS N + + L ++ + L N
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-10
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLY 426
+ + T ++++ ++ + L L +D NQL T+ + LT L L
Sbjct: 31 SGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTELGTLG 89
Query: 427 LDFNLLEGSIPFSL-GNLTLLTELELQSNYLQGNIPS----SLGNCRSLLSLNVSQNKLT 481
L N L S+P + +LT L +L L N L+ +PS L L L ++ N+L
Sbjct: 90 LANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTK---LKELRLNTNQLQ 144
Query: 482 GALPKQIFNITTLSLYLDLSNNFL 505
++P F+ T L LS N L
Sbjct: 145 -SIPAGAFDKLTNLQTLSLSTNQL 167
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 8e-07
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 175 EKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSG 234
EKL + L A+ L+ L +N++ N+L L L +A NQ +
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 235 NVPPSIY-NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNS-FSNT 292
++P ++ +L+ L+ LYL GN+L SLP + L KL + N IP F
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQS-IPAGAFDKL 154
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGN 327
+NL L L+ N F RL L + L GN
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 3e-12
Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 27/176 (15%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGA--------FKSFVAECEAL 755
++ IG G FG +Y A V+ + + F VA+ + +
Sbjct: 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96
Query: 756 RNIRHRNLIKIITI-----CSSIDSHGVDFKALVYEYMQNG-SLEEWLHHSNDQHDVCDL 809
+ R + + I + G ++ +V E + G L++ + N
Sbjct: 97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQK-ISGQNGT-----F 148
Query: 810 SLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLD--HDMVAHVGDFGLAK 863
L + I + +EY+H + +HGD+K +N+LL + ++ D+GL+
Sbjct: 149 KKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSY 201
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-12
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 62/242 (25%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
M+G+GSFG V+ + A+K L +K + + + + + ++ +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKAL---KK---DVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 771 SSIDSHGVDFKA---------LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---- 817
+ V EY+ G L ++H IQ H
Sbjct: 78 PFL----THMFCTFQTKENLFFVMEYLNGGDL---MYH------------IQSCHKFDLS 118
Query: 818 -----AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQV 870
A +I +++LH I++ DLK N+LLD D H+ DFG+ K
Sbjct: 119 RATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKD--GHIKIADFGMCK------- 166
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSM 925
+++ + + GT Y+APE +G + + + D +SFG+LL EM I + P + +
Sbjct: 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
Query: 926 FN 927
F+
Sbjct: 227 FH 228
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-12
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 68/245 (27%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRH-RNLIKIITI 769
++G+GSFG V L AVK+L K V + + + + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILK-------KDVVIQDDDVECTMVEKR------V 73
Query: 770 CSSIDSH--GVDFKA---------LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI- 817
+ + V EY+ G L ++H IQ++
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYH------------IQQVGRF 118
Query: 818 --------AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYT 867
A +IA + +L II+ DLK NV+LD + H+ DFG+ K
Sbjct: 119 KEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSE--GHIKIADFGMCK---- 169
Query: 868 CQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----T 922
+++ ++ GT Y+APE + D ++FG+LL EM + P
Sbjct: 170 ---ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226
Query: 923 DSMFN 927
D +F
Sbjct: 227 DELFQ 231
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 6e-12
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 57/231 (24%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
+IG+GS+ V L + + A+KV+ +K + + + +++ + +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVV---KK---ELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 771 SSIDSHGVDFKA---------LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---- 817
+ V + V EY+ G L + H +QR
Sbjct: 70 PFL----VGLHSCFQTESRLFFVIEYVNGGDL---MFH------------MQRQRKLPEE 110
Query: 818 -----AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQV 870
+ +I+ A+ YLH II+ DLK NVLLD + H+ D+G+ K
Sbjct: 111 HARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSE--GHIKLTDYGMCK------- 158
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ + ++ GT Y+APE G + + D ++ G+L+ EM + P
Sbjct: 159 EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 7e-12
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 62/242 (25%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITIC 770
++G+GSFG V + E G L AVKVL +K + + + + + ++ +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVL---KK---DVILQDDDVECTMTEKRILSLARNH 83
Query: 771 SSIDSHGVDFKA---------LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI---- 817
+ V E++ G L + H IQ+
Sbjct: 84 PFL----TQLFCCFQTPDRLFFVMEFVNGGDL---MFH------------IQKSRRFDEA 124
Query: 818 -----AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQV 870
A +I A+ +LH II+ DLK NVLLDH+ H DFG+ K
Sbjct: 125 RARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHE--GHCKLADFGMCK------- 172
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSM 925
+ + ++ GT Y+APE A D ++ G+LL EM P D +
Sbjct: 173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
Query: 926 FN 927
F
Sbjct: 233 FE 234
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 7e-12
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHR---NLIKI 766
+IG+GSFG V + + VA+K++ N K + E L ++R + N + +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRN--EKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
I + + + +E + +L E + + Q L L++ A I ++
Sbjct: 162 IHMLENFTFRN--HICMTFELLSM-NLYELIKKNKFQG--FSLPLVR--KFAHSILQCLD 214
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAH--VGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
LH + IIH DLKP N+LL + V DFG + C + + I
Sbjct: 215 ALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS-----CYEH--QRVYTYI---Q 261
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ Y APE +G+ M D++S G +L E+
Sbjct: 262 SRFYRAPEVILGARYGMPIDMWSLGCILAELL 293
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 8e-12
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNK 479
+ + L+ N ++ P + L ++L +N + P + RSL SL + NK
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 480 LTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPATLS 538
+T LPK +F L L+ N +N L ++ +L NL L + N++ T S
Sbjct: 92 IT-ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 149
Query: 539 ACTSLEYLNLSYNSF 553
+++ ++L+ N F
Sbjct: 150 PLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
NL T +I + +N I IP G L + NQ++ + + L +L L
Sbjct: 28 TNLPETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSL 85
Query: 426 YLDFNLLEGSIPFSL-GNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
L N + +P SL L L L L +N + + + +L L++ NKL +
Sbjct: 86 VLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ-TI 143
Query: 485 PKQIF----NITTLSLY 497
K F I T+ L
Sbjct: 144 AKGTFSPLRAIQTMHLA 160
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 175 EKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSG 234
++ + N + P + L+ I++ N++S P+ LR+ L + GN+ +
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT- 93
Query: 235 NVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
+P S+ L SL+LL L N++ L +D L L + +N +FS
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKI-NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152
Query: 294 NLVMLDLNLNLF 305
+ + L N F
Sbjct: 153 AIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 459 NIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQ 517
N+P ++ + + QN + +P F+ +DLSNN + L + L+
Sbjct: 29 NLPETITE------IRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLR 80
Query: 518 NLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNN 576
+L L + N+++ E+P SL+ L L+ N + L ++ +L L N
Sbjct: 81 SLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 139
Query: 577 LSGQIPKYLENLSFLEYLNISSNHFE 602
L L ++ ++++ N F
Sbjct: 140 LQTIAKGTFSPLRAIQTMHLAQNPFI 165
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 35/164 (21%)
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
+ + L N P FS + L + L+ N + A + L + L +L
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ---GLRS---LNSL 85
Query: 353 GLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGT 411
LYGN +I+ +P + L +L ++ N++
Sbjct: 86 VLYGN-------------------------KIT-ELPKSLFEGLFSLQLLLLNANKIN-C 118
Query: 412 IPHEI-GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSN 454
+ + L NL LL L N L+ + L + + L N
Sbjct: 119 LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 1e-11
Identities = 52/288 (18%), Positives = 100/288 (34%), Gaps = 74/288 (25%)
Query: 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR--- 759
G + +G G F V+ +G VA+KV+ ++ + E L+++R
Sbjct: 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSD 94
Query: 760 --HRNLIKIITICSSIDSHGVDFK--ALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
N ++ + GV+ +V+E + + L +W+ SN Q L +++
Sbjct: 95 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQ--GLPLPCVKK- 150
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLL--------------------------- 848
I + ++YLH C+ IIH D+KP N+LL
Sbjct: 151 -IIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 207
Query: 849 ----------------------DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
+ + D G A +++ +D++T
Sbjct: 208 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQ--------- 258
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934
Y + E +GS + D++S + E+ + + T E
Sbjct: 259 -YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDE 305
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 4e-11
Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 29/162 (17%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEA---LRNIRHRNLIKIIT 768
+G G G V + A+K+L A E R + ++++I+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRASQCPHIVRIVD 78
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSL----EEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+ + G +V E + G L ++ + + + I I A
Sbjct: 79 VYEN-LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS--------EIMKSIGEA 129
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAK 863
I+YLH I H D+KP N+L + + + DFG AK
Sbjct: 130 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 5e-11
Identities = 47/170 (27%), Positives = 67/170 (39%), Gaps = 30/170 (17%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNL 763
F IG G+FG + G VA+K+ + + E + L
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFY-----KQL 61
Query: 764 IKIITICSSIDSHGV--DFKALVYEYMQNG-SLEEWLHHSNDQHDVCD--LSLIQRLHIA 818
I + G + A+V E + G SLE D D+CD SL L IA
Sbjct: 62 GSGDGIP-QVYYFGPCGKYNAMVLELL--GPSLE-------DLFDLCDRTFSLKTVLMIA 111
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDM-----VAHVGDFGLAK 863
I + +EY+H +I+ D+KP N L+ V H+ DF LAK
Sbjct: 112 IQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 3e-10
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHR---NLIK 765
++IG+GSFG V + VA+K++ N +K E L +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKN--KKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
I+ + LV+E + +L + L ++N + +SL A + A+
Sbjct: 118 IVHLKRHFMFRN--HLCLVFEMLSY-NLYDLLRNTNFR----GVSLNLTRKFAQQMCTAL 170
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAH--VGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+L + IIH DLKP N+LL + + + DFG + CQ+
Sbjct: 171 LFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-----CQLGQRIYQYIQ---- 220
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
+ Y +PE +G +A D++S G +L+EM
Sbjct: 221 -SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH 252
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 4e-10
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 43/167 (25%)
Query: 442 NLTLLTELELQSNYLQGN----IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLY 497
+ TE E + + ++L ++ L +S N + I++LS
Sbjct: 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE--------KISSLS-- 67
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYN---SFR 554
++NL L + RN + +I + +LE L +SYN S
Sbjct: 68 -----------------GMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS 109
Query: 555 GGIPLSLSSLKSVKVLDLSSNNLS--GQIPKYLENLSFLEYLNISSN 599
G + L +++VL +S+N ++ G+I L L LE L ++ N
Sbjct: 110 G-----IEKLVNLRVLYMSNNKITNWGEI-DKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 5e-07
Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 42/194 (21%)
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQL 424
S+ V+++ I + + + L + N + I + + NL++
Sbjct: 18 KSVVATEAEKVELHGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KISS-LSGMENLRI 74
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGAL 484
L L NL++ I L EL + N + +SL L++L V
Sbjct: 75 LSLGRNLIK-KIENLDAVADTLEELWISYNQI-----ASLSGIEKLVNLRV--------- 119
Query: 485 PKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGEIPAT------- 536
L +SNN + + ++ L L +L ++ N + +
Sbjct: 120 -------------LYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYR 166
Query: 537 ---LSACTSLEYLN 547
+ +L+ L+
Sbjct: 167 IEVVKRLPNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 235 NVPPSIYNLSSLELLYLRGNRL--IGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
+ ++ L + + L L N + I SL + L + N I N +
Sbjct: 39 KMDATLSTLKACKHLALSTNNIEKISSLS-----GMENLRILSLGRNLIKK-IENLDAVA 92
Query: 293 SNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIAL 352
L L ++ N + + +L NL L ++ N + + I L KL L
Sbjct: 93 DTLEELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKI-----TNWGEIDKLAALDKLEDL 145
Query: 353 GLYGN 357
L GN
Sbjct: 146 LLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 519 LVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFR---GGIPLSLSSLKSVKVLDLSSN 575
VEL + ++ ATLS + ++L LS N+ LS ++++++L L N
Sbjct: 27 KVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEKISS-----LSGMENLRILSLGRN 80
Query: 576 NLSGQIPKYLENLSFLEYLNISSNHFE 602
+ +I LE L IS N
Sbjct: 81 LIK-KIENLDAVADTLEELWISYNQIA 106
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 5e-10
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLY 426
A + T + + NQI+ P +L+NL + NQL +P + LT L +L
Sbjct: 36 AGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLD 94
Query: 427 LDFNLLEGSIP---FSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGA 483
L N L +P F L L EL + N L +P + L L + QN+L +
Sbjct: 95 LGTNQLT-VLPSAVFD--RLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-S 149
Query: 484 LPKQIF----NITTLSLY 497
+P F ++T L+
Sbjct: 150 IPHGAFDRLSSLTHAYLF 167
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ---GNIPSSLGNCRSLLSLNVS 476
TN Q+LYL N + P +L L EL L SN L + SL L L++
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ---LTVLDLG 96
Query: 477 QNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPAT 536
N+LT LP +F+ L + N L LP + L +L L + +NQ+
Sbjct: 97 TNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154
Query: 537 LSACTSLEYLNLSYN 551
+SL + L N
Sbjct: 155 FDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 34/158 (21%)
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
L L+ N + P F L NL L L N LG
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-------------------------- 78
Query: 358 RFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI 416
LP + + T +++G NQ++ +PS + LV+L + N+LT +P I
Sbjct: 79 -----LPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGI 131
Query: 417 GKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSN 454
+LT+L L LD N L+ + L+ LT L N
Sbjct: 132 ERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 6e-10
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG GSFG +Y G G VA+K+ K E + + ++ + I
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLEC--VKTKHPQLHIESKIYKMMQ-----GGVGIP- 68
Query: 772 SIDSHGV--DFKALVYEYMQNGSLEEWLHHSNDQHDVCD--LSLIQRLHIAIDIAYAIEY 827
+I G D+ +V E + SLE D + C SL L +A + IEY
Sbjct: 69 TIRWCGAEGDYNVMVME-LLGPSLE-------DLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 828 LHHHCQPPIIHGDLKPSNVLL---DHDMVAHVGDFGLAKFLYTCQVDDVETP-SSSIGIK 883
+H IH D+KP N L+ + ++ DFGLAK Y P + +
Sbjct: 121 IHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK-YRDARTHQHIPYRENKNLT 176
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918
GT Y + +G E S D+ S G +L+ F
Sbjct: 177 GTARYASINTHLGIEQSRRDDLESLGYVLMY-FNL 210
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 60.7 bits (146), Expect = 8e-10
Identities = 33/213 (15%), Positives = 57/213 (26%), Gaps = 49/213 (23%)
Query: 686 PMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVL-------- 737
P P K IG+G FG V++ I VA+K++
Sbjct: 12 PFSHCLPTEKLQRCEK----------IGEGVFGEVFQTIADHT--PVAIKIIAIEGPDLV 59
Query: 738 NLTRKGAFKSFVAECEALR---NIRHRNLIKIITICSSIDSHGVDFKA-----LVYEYMQ 789
N + + F+ + E + + + H V +++
Sbjct: 60 NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYN 119
Query: 790 --NGSLE---------------EWLHHSNDQHDVCD--LSLIQRLHIAIDIAYAIEYLHH 830
GS E+ D + SL I + ++
Sbjct: 120 STKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA 179
Query: 831 HCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAK 863
+ H DL NVLL + + K
Sbjct: 180 SLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGK 210
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 46/170 (27%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GSFG ++ G VA+K E R L
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIK----------------FEP-RRSDAPQLRDEYRTYK 60
Query: 772 SID-SHGV----------DFKALVYEYMQNGSLEEWLHHSNDQHDVCD--LSLIQRLHIA 818
+ G+ LV + + SLE D D+C S+ A
Sbjct: 61 LLAGCTGIPNVYYFGQEGLHNVLVID-LLGPSLE-------DLLDLCGRKFSVKTVAMAA 112
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLL-----DHDMVAHVGDFGLAK 863
+ ++ +H +++ D+KP N L+ + + +V DFG+ K
Sbjct: 113 KQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L N F + I +IN N+I+ I G +N + N+L
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTSNRLE- 94
Query: 411 TIPHEI-GKLTNLQLLYLDFNLLEGSIP-FSLGNLTLLTELELQSNYLQGNIPSSLGNCR 468
+ H++ L +L+ L L N + + S L+ + L L N + P +
Sbjct: 95 NVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLH 153
Query: 469 SLLSLNVSQN 478
SL +LN+ N
Sbjct: 154 SLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 14/147 (9%)
Query: 459 NIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG---N 515
+IP L ++ N+ T IF ++ SNN + D +E G
Sbjct: 29 HIPQYTAE------LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITD---IEEGAFEG 79
Query: 516 LQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSS 574
+ E+ ++ N++ + SL+ L L N S L SV++L L
Sbjct: 80 ASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYD 138
Query: 575 NNLSGQIPKYLENLSFLEYLNISSNHF 601
N ++ P + L L LN+ +N F
Sbjct: 139 NQITTVAPGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-07
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 4/133 (3%)
Query: 175 EKLSIADNHLTGQLP-ASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
+L + +N T L L+ IN N+++ + + N+
Sbjct: 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE 94
Query: 234 GNVPPSI-YNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNT 292
NV + L SL+ L LR NR+ + D + L + + +N + P +F
Sbjct: 95 -NVQHKMFKGLESLKTLMLRSNRI-TCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL 152
Query: 293 SNLVMLDLNLNLF 305
+L L+L N F
Sbjct: 153 HSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 14/139 (10%)
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
+P I L L N I LP+L + N + +F S +
Sbjct: 26 IPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV 83
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLG---NGAANDLDFITPLTNCSKLIAL 352
+ L N F L++L L+L N + N + L S + L
Sbjct: 84 NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGL---------SSVRLL 134
Query: 353 GLYGNRFGGVLPHSIANLS 371
LY N+ V P + L
Sbjct: 135 SLYDNQITTVAPGAFDTLH 153
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 517 QNLVELDISRNQVSG-EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSN 575
Q EL ++ N+ + E L +N S N + V + L+SN
Sbjct: 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91
Query: 576 NLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVF---SNKTRISLSGN 622
L K + L L+ L + SN V F S+ +SL N
Sbjct: 92 RLENVQHKMFKGLESLKTLMLRSNRIT-CVG-NDSFIGLSSVRLLSLYDN 139
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 5e-09
Identities = 72/494 (14%), Positives = 142/494 (28%), Gaps = 155/494 (31%)
Query: 352 LGLYGNRFGG----VLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQ 407
+ + G G + ++ + VQ M I F ++L
Sbjct: 153 VLIDG--VLGSGKTWV--ALDVCLSYKVQCKM---------DFKI--------FWLNLKN 191
Query: 408 LTGTIPHEIGKLTNLQLLY--LDFNLLEG-----SIPFSLGNL-TLLTELELQSNYLQGN 459
P + L LQ L +D N +I + ++ L L Y
Sbjct: 192 CN--SPETV--LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY---- 243
Query: 460 IPSSL----------------GNCRSLL---SLNVSQNKLTGALPKQIF-NITTLSLY-- 497
+ L +C+ LL V+ + L+ A I + +++L
Sbjct: 244 -ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDHHSMTLTPD 301
Query: 498 --LDLSNNFLN---DSLPLEVGNLQNLVELDISRNQVSGEIPATLS--ACTSLEYLNLSY 550
L +L+ LP EV L + ++S I ++ T + +++
Sbjct: 302 EVKSLLLKYLDCRPQDLPREV--------LTTNPRRLSI-IAESIRDGLATWDNWKHVNC 352
Query: 551 NSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLS-FLEYLNISSNHFE---GKVP 606
+ I SL+ L+ + K + LS F +I + V
Sbjct: 353 DKLTTIIESSLNVLE------------PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400
Query: 607 TKGV------FSNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTISC 660
V + + + + L K ++ AL + ++
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTI-SIPSIYLE---LKVKLENEYALHRSIVD----- 451
Query: 661 LILLGCFIVVYARRRRFVHKSSVTSPMEQQFPIVSY-------AELSKATGEFSTSNMIG 713
Y + F + P Q+ S+ E + F +
Sbjct: 452 ---------HYNIPKTF-DSDDLIPPYLDQY-FYSHIGHHLKNIEHPERMTLFRMVFL-- 498
Query: 714 QGSFGFVYRGI-------LGEGGLLVAVKVLNLTRK-------------GAFKSFVAECE 753
F F+ + I G +L ++ L + A F+ + E
Sbjct: 499 --DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556
Query: 754 A-LRNIRHRNLIKI 766
L ++ +L++I
Sbjct: 557 ENLICSKYTDLLRI 570
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 9e-09
Identities = 94/654 (14%), Positives = 196/654 (29%), Gaps = 169/654 (25%)
Query: 72 HRHQ---RVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTL 128
H H + + + I + +F+ D D ++P + +D +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFED-----AFVDNFDCKDVQ---DMPKSILSKEEIDHI 54
Query: 129 MLANNSFSGKIPTNLSGCSNLIN-FLAHGNNLVGQI---AANIGYNWMRLEKLSIADNHL 184
+ +SG L L+ +V + I Y ++ + +
Sbjct: 55 I--------MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQP 105
Query: 185 TGQLPASI-------GNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAG-------- 229
+ I + V NV + ++ L +LR + + I G
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165
Query: 230 ------------NQFSGNV----------PPSIYNLSSLELLYLRGNRLIGSLPIDIGLT 267
+ + P ++ L L+ L + + S D
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV--LEMLQKLLYQIDPNWTSRS-DHSSN 222
Query: 268 LPKLTNFVIAENN---FSGPIPNSFSNTSNLVMLDLN----LNLFSGKVPINF-SRLQNL 319
+ + + AE S P N LV+L++ N F+ I +R + +
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCL-----LVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 320 SWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINM 379
+ + L + + L L +L
Sbjct: 278 T------DFLSAATTTHISLDHHSMTLTPDEVKSL----LLKYLDCRPQDL--------- 318
Query: 380 GRNQISGTIP---SGIGNLV--NLNGFG----IDLNQLTGTIPHEIGKLT--NLQLLYLD 428
++ T P S I + L + ++ ++LT I + L + ++
Sbjct: 319 -PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 429 FNLLEGSIPFSLGNLTLL-TELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQ 487
++ S L+L+ ++ + + L SL+ ++ ++ +P
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVI---KSDVMVVVNKLHK-YSLVEKQPKESTIS--IP-- 429
Query: 488 IFNITTLSLYLDLSNNFLNDSLPLEVGNL-QNLVEL----------DISRNQVSG----E 532
S+YL+L N+ L +++V+ D+ +
Sbjct: 430 -------SIYLELKVKLENEY------ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH 476
Query: 533 IPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKV-LDLSSNNLSGQIPKYLENLSFL 591
I L E + L FR + L L+ K+ D ++ N SG I L+ L F
Sbjct: 477 IGHHLKNIEHPERMTL----FR-MVFLDFRFLEQ-KIRHDSTAWNASGSILNTLQQLKFY 530
Query: 592 E-YLNISSNHFEGKVPT-------------KGVFSNKTRISLSGNGKLCGGLYE 631
+ Y+ + +E V +++ RI+L ++E
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAED---EAIFE 581
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 1e-07
Identities = 52/345 (15%), Positives = 103/345 (29%), Gaps = 105/345 (30%)
Query: 737 LNLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVD-F-K-ALVYEYMQNGSL 793
N++R + ++ +AL +R K + I GV K + + + +
Sbjct: 129 YNVSRL---QPYLKLRQALLELRP---AKNVLI------DGVLGSGKTWVALDVCLSYKV 176
Query: 794 EE-------WLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPS-- 844
+ WL+ N L ++Q+L ID + H + ++
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT-SRSDHSSNIKLRIHSIQAELR 235
Query: 845 ---------NVLLDHDMVAHVGDFGLAKFLYTCQV-----DDVETPSSSIGIKGTVGYVA 890
N LL V + F +C++ T S +
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKA--WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 891 PEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDP 950
+ + + LL ++ RP D LP+ V+ +P
Sbjct: 294 HSMTLTPDEVKS---------LLLKYLDCRPQD----------------LPREVLTT-NP 327
Query: 951 LLL------LEV---RTNNSKNPCGDG-RGGIEECL--------------VAV------I 980
L + +N K+ D IE L ++V I
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 981 TIGVLCSMESPIDRTLEMRNVVAKLC----AAR---EAFLSVYDL 1018
+L + + ++ ++ VV KL + E+ +S+ +
Sbjct: 388 PTILLSLIWFDVIKS-DVMVVVNKLHKYSLVEKQPKESTISIPSI 431
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 5e-07
Identities = 92/604 (15%), Positives = 178/604 (29%), Gaps = 168/604 (27%)
Query: 404 DLNQLTGTIPHEIGKLTNLQLLYLDF--NLLEGSIPFSLGNLT---LLTEL-----ELQS 453
+ L I E + + + +Y++ L + F+ N++ +L EL+
Sbjct: 90 NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149
Query: 454 N---YLQGNIPSSLGNC-RSLLSLNVSQN-KLTGALPKQIFNITTLSLYLDLSNNFLNDS 508
+ G + ++ ++L+V + K+ + +IF +L+L N ++
Sbjct: 150 AKNVLIDG-----VLGSGKTWVALDVCLSYKVQCKMDFKIF-------WLNLKNCNSPET 197
Query: 509 LPLEVGNLQNL-VELD---ISRNQVSGEIPATL-SACTSLEYLNLSYNSFRGGIPLSL-- 561
+ LE LQ L ++D SR+ S I + S L L L + L
Sbjct: 198 V-LE--MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKSKPY----ENCLLV 249
Query: 562 ----SSLKSVKVLDLSS------------NNLSGQIPKYLENLSFLEYLNISSNHFEGKV 605
+ K+ +LS + LS ++ L++ +++ E
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI----SLDHHSMTLTPDE--- 302
Query: 606 PTKGVFSNKTRISLSGNGKLCGGLYELQLPSCGSKGSRKSTVALFKVVIPVTISCLILLG 665
K + LP + P +S ++
Sbjct: 303 -VKSLLLKYLDCRPQ------------DLPREVLTTN------------PRRLS---IIA 334
Query: 666 CFIVVYARRR---RFVHKSSVTSPMEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYR 722
I + V+ +T+ +E S L E+ F
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIE-----SSLNVLE--PAEYRKM---------FDRL 378
Query: 723 GILGEGGLLVAVKVL-----NLTRKGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHG 777
+ + +L ++ + V + + + I+I
Sbjct: 379 SVFPPS-AHIPTILLSLIWFDVIKSDV-MVVVNKLHKYSLVEKQPKESTISI------PS 430
Query: 778 VDFKALVYEYMQNGSLEEWLHHS-------NDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
+ E E LH S D DL +D Y ++ H
Sbjct: 431 IYL-----ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY-----LD-QYFYSHIGH 479
Query: 831 HCQPPIIHGDLKP--SNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS--IGIKGTV 886
H + I H + V LD F K + + + +K
Sbjct: 480 HLK-NIEHPERMTLFRMVFLDF-------RFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531
Query: 887 GYVA---PEYGMGSEASMAGDVYSFGILLLEMFIRKRPTD----SMFNDGLTIHEFAMKA 939
Y+ P+Y + + F + E I + TD ++ + I E A K
Sbjct: 532 PYICDNDPKYER-----LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQ 586
Query: 940 LPQR 943
+ QR
Sbjct: 587 V-QR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 3e-06
Identities = 69/486 (14%), Positives = 142/486 (29%), Gaps = 108/486 (22%)
Query: 41 AIKSQLHDPLGVTSSWNNSINLCQWTG--------VTCGHRHQRVTKL--YLRNQSIGGI 90
IK++ P +T + + + V+ R Q KL L
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRL-YNDNQVFAKYNVS---RLQPYLKLRQALLELRPAKN 152
Query: 91 LSPH----VGNLSFLRLIDLADNNFYGNIPHEV-----GRLSRLDTLMLANNSFSGKIPT 141
+ G +++ L + ++ + +T++ +I
Sbjct: 153 VLIDGVLGSGK-TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 142 NL-SGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKV 200
N S + N +++ ++ + + L + N + N
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELR-RLLKSKPYENCLLVLLN---------VQNAKAWNA 261
Query: 201 INVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVP--PSIYNLS---SLELL--YLRG 253
N LS +I L R + + ++ L+ LL YL
Sbjct: 262 FN-----LSCKI---LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-- 311
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAE---------NNFSGPIPNSFSNT--SNLVMLD--- 299
+ LP ++ T P+ + +IAE +N+ + + S+L +L+
Sbjct: 312 DCRPQDLPREVLTTNPRRLS-IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 300 -----LNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGL 354
L++F I L + W + +D+ + + K +
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLI-W--------FDVIKSDVMVV--VNKLHKYSLVEK 419
Query: 355 YGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPH 414
SI ++ + +I + + L
Sbjct: 420 QPKES----TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 415 EIG----------KLTNLQLLYLDFNLLEGSI---------PFSLGNLTLLTELELQSNY 455
IG ++T ++++LDF LE I S+ N L +L+ Y
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN--TLQQLKFYKPY 533
Query: 456 LQGNIP 461
+ N P
Sbjct: 534 ICDNDP 539
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 5e-09
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 498 LDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGI 557
+ L+ + + N ELD+ ++ I + + ++ S N R
Sbjct: 2 VKLTAELIEQAAQYT--NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR--- 55
Query: 558 PLS-LSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
L L+ +K L +++N + + L L L +++N
Sbjct: 56 KLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 19/147 (12%)
Query: 462 SSLGNCRSLLSLNVSQNKLTGALPKQIFNITTL--SL-YLDLSNNFLNDSLPLEVGNLQN 518
+ N L++ K+ I N+ +D S+N + L+
Sbjct: 13 AQYTNAVRDRELDLRGYKIP-----VIENLGATLDQFDAIDFSDNEIRKLDGFP--LLRR 65
Query: 519 LVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRG-GIPLSLSSLKSVKVLDLSSNNL 577
L L ++ N++ A L L L+ NS G L+SLKS+ L + N +
Sbjct: 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125
Query: 578 SGQIPKY-------LENLSFLEYLNIS 597
+ Y + + L++ +
Sbjct: 126 T-NKKHYRLYVIYKVPQVRVLDFQKVK 151
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 5e-07
Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 9/120 (7%)
Query: 238 PSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVM 297
N L LRG ++ + ++G TL + ++N + F L
Sbjct: 13 AQYTNAVRDRELDLRGYKI--PVIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKT 68
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
L +N N L +L+ L+L N+L +L + PL + L L + N
Sbjct: 69 LLVNNNRICRIGEGLDQALPDLTELILTNNSL-----VELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 9e-04
Identities = 28/137 (20%), Positives = 42/137 (30%), Gaps = 23/137 (16%)
Query: 147 SNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSV----LKVIN 202
+ LI A N V R +L + + I NL I+
Sbjct: 6 AELIEQAAQYTNAV------------RDRELDLRGYKIP-----VIENLGATLDQFDAID 48
Query: 203 VEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPI 262
+N + ++ LR L + N+ L L L L N L+ +
Sbjct: 49 FSDNEIR-KLDG-FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDL 106
Query: 263 DIGLTLPKLTNFVIAEN 279
D +L LT I N
Sbjct: 107 DPLASLKSLTYLCILRN 123
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 58.2 bits (140), Expect = 6e-09
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 235 NVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSN 294
+ + +L LY+ + + L + L +L N I ++ P++F T
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 295 LVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
L L+L+ N L +L L+L+GN L
Sbjct: 82 LSRLNLSFNALESLSWKTVQGL-SLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 4e-08
Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 405 LNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP-FSLGNLTLLTELELQSNYLQGNIPSS 463
H + NL LY++ + L L L L + + L+ P +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 464 LGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
L LN+S N L +L + +L L LS N L+
Sbjct: 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQ-ELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 1e-07
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 508 SLPLEVGNLQNLVELDISRNQVSGEIPA-TLSACTSLEYLNLSYNSFRGGIPLSLSSLKS 566
+ +NL EL I Q + L L L + + R P +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 567 VKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHF 601
+ L+LS N L K ++ LS L+ L +S N
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 4/112 (3%)
Query: 467 CRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDIS 525
L +++ + L+ L + N L L L L L I
Sbjct: 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLT-ELYIENQQHLQHLELRDLRGLGELRNLTIV 64
Query: 526 RNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
++ + P L LNLS+N+ + S++ L LS N L
Sbjct: 65 KSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 3e-04
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 114 NIPHEVGRLSRLDTLMLANNSFSGKIPTN-LSGCSNLINFLAHGNNLVGQIAANIGYNWM 172
+ H + L L + N + L G L N + L +A + +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVAPDAFHFTP 80
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL 208
RL +L+++ N L ++ LS L+ + + N L
Sbjct: 81 RLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 9e-04
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 6/70 (8%)
Query: 557 IPLSLSSLKSVKVLDLSSNNLSGQIPKY-LENLSFLEYLNISSNHFEGKVPTKGVFS--- 612
L +++ L + + + L L L L I + V F
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR-FVA-PDAFHFTP 80
Query: 613 NKTRISLSGN 622
+R++LS N
Sbjct: 81 RLSRLNLSFN 90
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 1e-08
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG GSFG +Y G + VA+K+ N K + E + R ++ I
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLEN--VKTKHPQLLYESKIYRILQGGTGI------P 66
Query: 772 SIDSHGV--DFKALVYEYMQNGSLEEWLHHSNDQHDVCD--LSLIQRLHIAIDIAYAIEY 827
++ GV D+ LV + + SLE D + C LSL L +A + +E+
Sbjct: 67 NVRWFGVEGDYNVLVMD-LLGPSLE-------DLFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAH---VGDFGLAKFLYTCQVDDVETP-SSSIGIK 883
+H +H D+KP N L+ A+ + DFGLAK Y P + +
Sbjct: 119 VHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK-KYRDTSTHQHIPYRENKNLT 174
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIR 918
GT Y + +G E S D+ S G +L+ F+R
Sbjct: 175 GTARYASVNTHLGIEQSRRDDLESLGYVLMY-FLR 208
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 56.9 bits (136), Expect = 2e-08
Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 23/205 (11%)
Query: 404 DLNQLTGTIPHEIGKLTNLQLLYL-DFNLLEGSI-PFSLGNLT--LLTELELQSNYLQGN 459
D + + I K + + L+ D + E I +L+ L L + ++G
Sbjct: 123 DCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGT 182
Query: 460 IPSSLGNCRS--LLSLNVSQNKLTGALPKQIF-----NITTLSLYLDLSNNFLNDSLP-- 510
S+G L SL + L ++ + I N+ L LY+ + + + +
Sbjct: 183 NNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242
Query: 511 ---LEVGNLQNLVELDISRNQVSGEIPATLSAC---TSLEYLNLSYNSF--RGGIPL--S 560
NL L I + + LE +++S G L
Sbjct: 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDH 302
Query: 561 LSSLKSVKVLDLSSNNLSGQIPKYL 585
+ +K +K +++ N LS ++ K L
Sbjct: 303 VDKIKHLKFINMKYNYLSDEMKKEL 327
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 51.1 bits (121), Expect = 1e-06
Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 16/169 (9%)
Query: 386 GTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTL 445
+ + + LN I L +L+++ +L
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPD-SVVEDILGSDLPN 220
Query: 446 LTELEL---QSNYLQGNIPSSL------GNCRSLLSLNVSQNKLTGALPKQIFNITTLS- 495
L +L L +Y + +L L + + + + L
Sbjct: 221 LEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQ 280
Query: 496 -LYLDLSNNFLNDS----LPLEVGNLQNLVELDISRNQVSGEIPATLSA 539
+D+S L D L V +++L +++ N +S E+ L
Sbjct: 281 LETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 51.1 bits (121), Expect = 1e-06
Identities = 23/163 (14%), Positives = 61/163 (37%), Gaps = 22/163 (13%)
Query: 457 QGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG-- 514
Q ++ L L +L + K N+ +L ++ + L DS+ ++
Sbjct: 161 QVDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSL----EIISGGLPDSVVEDILGS 216
Query: 515 NLQNLVELDI---SRNQVSGEIPATLSA------CTSLEYLNLSYNSFRGGIPLSLSS-- 563
+L NL +L + + +L++L + + +
Sbjct: 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESD 276
Query: 564 -LKSVKVLDLSSNNLSG----QIPKYLENLSFLEYLNISSNHF 601
L ++ +D+S+ L+ + +++ + L+++N+ N+
Sbjct: 277 ILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 2e-08
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 20/141 (14%)
Query: 442 NLTLLTELELQSNYLQ-GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL--YL 498
+ EL L + G I +L L++ L + N+ L L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-----SVSNLPKLPKLKKL 76
Query: 499 DLSNNFLNDSLPLEVGNLQNLVELDISRNQVS--GEIPATLSACTSLEYLNLSYN----- 551
+LS N + L + L NL L++S N++ + L L+ L+L
Sbjct: 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDLFNCEVTNL 135
Query: 552 -SFRGGIPLSLSSLKSVKVLD 571
+R + L + LD
Sbjct: 136 NDYRESV---FKLLPQLTYLD 153
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 5e-08
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
+++ L L + + L + + N L L+L+
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-VSN-LPKLPKLKKLELS 79
Query: 302 LNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
N G + + +L NL+ L L+GN L D+ + PL L +L L+
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKL-----KDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-07
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 515 NLQNLVELDISRNQVS-GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLS 573
+ EL + + + G+I + +LE+L+L + +L L +K L+LS
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-VS-NLPKLPKLKKLELS 79
Query: 574 SNNLSGQIPKYLENLSFLEYLNISSNHFE 602
N + G + E L L +LN+S N +
Sbjct: 80 ENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 30/148 (20%)
Query: 403 IDLNQLT-GTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIP 461
+D + G I + NL+ L L L S+ +L L L +LEL N + G +
Sbjct: 31 LDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SVS-NLPKLPKLKKLELSENRIFGGLD 88
Query: 462 SSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVE 521
+L LN+S NKL ++ PL+ L+ L
Sbjct: 89 MLAEKLPNLTHLNLSGNKLKD----------------------ISTLEPLK--KLECLKS 124
Query: 522 LDISRNQVSGEI---PATLSACTSLEYL 546
LD+ +V+ + L YL
Sbjct: 125 LDLFNCEVTNLNDYRESVFKLLPQLTYL 152
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 2e-08
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
+ ++ ++ + N++ ++P G+ L L + NQ+ ++P + KLT L +L
Sbjct: 24 TGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTIL 81
Query: 426 YLDFNLLEGSIP---FSLGNLTLLTELELQSNYLQ 457
YL N L+ S+P F LT L EL L +N L+
Sbjct: 82 YLHENKLQ-SLPNGVFD--KLTQLKELALDTNQLK 113
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPS----SLGNCRSLLSLNV 475
++ L L+ N L+ LT LT+L L N +Q ++P L L L +
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTK---LTILYL 83
Query: 476 SQNKLTGALPKQIFNITTLSLYLDLSNNFL 505
+NKL +LP +F+ T L L N L
Sbjct: 84 HENKLQ-SLPNGVFDKLTQLKELALDTNQL 112
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 3e-08
Identities = 55/327 (16%), Positives = 110/327 (33%), Gaps = 69/327 (21%)
Query: 317 QNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG----GVLPHSIANLST 372
++ L L+ NNL + + +L T S + +L L GN G L +A +
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPAS-VTSLNLSGNSLGFKNSDELVQILAAIPA 80
Query: 373 TTVQINMGRNQISGTIPSGIGN-LVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNL 431
+N+ N +S + L + + +L L +N
Sbjct: 81 NVTSLNLSGNFLSYKSSDELVKTLAAIP--------------------FTITVLDLGWND 120
Query: 432 L--EGSIPFS---LGNLTLLTELELQSNYLQGN----IPSSLGNC-RSLLSLNVSQNKLT 481
+ S F +T L L+ N L + L ++ SLN+ N L
Sbjct: 121 FSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180
Query: 482 --------GALPKQIFNITTLSLYLDLSNNFLNDSLPLEVG-----NLQNLVELDISRNQ 528
L ++T+L DLS N L E+ ++V L++ N
Sbjct: 181 SKNCAELAKFLASIPASVTSL----DLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236
Query: 529 VSGE----IPATLSACTSLEYLNLSYNSFRG-------GIPLSLSSLKSVKVLDLSSNNL 577
+ G + + L+ + L Y+ + + + +++ + ++D + +
Sbjct: 237 LHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296
Query: 578 SG----QIPKYLENLSF-LEYLNISSN 599
I + LS + ++ +
Sbjct: 297 HPSHSIPISNLIRELSGKADVPSLLNQ 323
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 7e-08
Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 45/222 (20%)
Query: 420 TNLQLLYLDFNLL--EGSIPFSLG---NLTLLTELELQSNYLQGN----IPSSLGNC-RS 469
N+ L L N L + S +T L+L N + N S
Sbjct: 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPAS 139
Query: 470 LLSLNVSQNKLT--------GALPKQIFNITTLSLYLDLSNNFLND------SLPLEVGN 515
+ SLN+ N L L N+ +L +L N L + L
Sbjct: 140 ITSLNLRGNDLGIKSSDELIQILAAIPANVNSL----NLRGNNLASKNCAELAKFLASIP 195
Query: 516 LQNLVELDISRNQVSGE----IPATLSAC-TSLEYLNLSYNSFRG----GIPLSLSSLKS 566
++ LD+S N + + + S+ + LNL N G + L SLK
Sbjct: 196 -ASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKH 254
Query: 567 VKVLDLSSNNLSGQ-------IPKYLENLSFLEYLNISSNHF 601
++ + L + + + N+ + ++ +
Sbjct: 255 LQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEI 296
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 38/283 (13%), Positives = 97/283 (34%), Gaps = 48/283 (16%)
Query: 290 SNTSNLVMLDLNLNLFSGKVPINFSRL-----QNLSWLLLAGNNLGNGAANDLDFITPLT 344
+ +N+ L+L+ N S K + ++ L L N+ + ++++
Sbjct: 77 AIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNL 136
Query: 345 NCSKLIALGLYGNRFGGV----LPHSIANLSTTTVQINMGRNQI--------SGTIPSGI 392
S + +L L GN G L +A + +N+ N + + + S
Sbjct: 137 PAS-ITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIP 195
Query: 393 GNLVNLNGFGIDLNQLTGTIPHEIGKL-----TNLQLLYLDFNLLEGS----IPFSLGNL 443
++ +L+ + N L E+ + ++ L L N L G + +L
Sbjct: 196 ASVTSLD---LSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSL 252
Query: 444 TLLTELELQSNYLQG-------NIPSSLGNCRSLLSLNVSQNK--------LTGALPKQI 488
L + L + ++ + ++ N + ++ ++ + + ++ + +
Sbjct: 253 KHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIRELS 312
Query: 489 FNITTLSLYLDLSNNFL--NDSLPLEVGNLQNLVELDISRNQV 529
SL + F + + ++ L E + +
Sbjct: 313 GKADVPSLL-NQCLIFAQKHQTNIEDLNIPDELRESIQTCKPL 354
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 50/239 (20%), Positives = 89/239 (37%), Gaps = 62/239 (25%)
Query: 711 MIGQGSFGFVYRGI-LGEGGLLVAVKVL-NLT--RKGAFKSFVAECEALRNIRHR---NL 763
+G+G+FG V + G VA+K++ N+ R+ A E L+ I+ + N
Sbjct: 26 NLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL----EINVLKKIKEKDKENK 81
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+ + + HG + +E + + E+L +N Q L ++ H+A + +
Sbjct: 82 FLCVLMSDWFNFHG--HMCIAFELL-GKNTFEFLKENNFQP--YPLPHVR--HMAYQLCH 134
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG-------------------DFGLAKF 864
A+ +LH + + H DLKP N+L + + DFG A
Sbjct: 135 ALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-- 189
Query: 865 LYTCQVDDVETPSSSIGIKGTVGYV------APEYGMGSEASMAGDVYSFGILLLEMFI 917
+ T V PE + + DV+S G +L E +
Sbjct: 190 ---TFDHEHHTT-----------IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 298 LDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
LDL N F L +L+ L L GN L +
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-------------------------- 66
Query: 358 RFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI 416
LP+ + N T+ +N+ NQ+ ++P+G+ L L ++ NQL ++P +
Sbjct: 67 -----LPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGV 119
Query: 417 -GKLTNLQLLYLDFNLLEGSIP---FSLGNLTLLTELELQSN 454
KLT L+ L L N L+ S+P F LT L + L N
Sbjct: 120 FDKLTQLKDLRLYQNQLK-SVPDGVFD--RLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLLY 426
+ T +++ N + L +L + N+L ++P+ + KLT+L L
Sbjct: 24 TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLN 82
Query: 427 LDFNLLEGSIP---FSLGNLTLLTELELQSNYLQGNIPS----SLGNCRSLLSLNVSQNK 479
L N L+ S+P F LT L EL L +N LQ ++P L L L + QN+
Sbjct: 83 LSTNQLQ-SLPNGVFD--KLTQLKELALNTNQLQ-SLPDGVFDKLTQ---LKDLRLYQNQ 135
Query: 480 LTGALPKQIF----NITTLSLY 497
L ++P +F ++ + L+
Sbjct: 136 LK-SVPDGVFDRLTSLQYIWLH 156
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 9e-07
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ---GNIPSSLGNCRSLLSLNVS 476
L L+ N L+ LT LT+L L N LQ + + L + L LN+S
Sbjct: 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS---LTYLNLS 84
Query: 477 QNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQ 528
N+L +LP +F+ T L L+ N L SLP V L L +L + +NQ
Sbjct: 85 TNQLQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ 135
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 9e-08
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 7/116 (6%)
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
S ++ L L +R + +L + I N + L L+L+
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-IAN-LPKLNKLKKLELS 72
Query: 302 LNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGN 357
N SG + + + NL+ L L+GN + DL I PL L +L L+
Sbjct: 73 DNRVSGGLEVLAEKCPNLTHLNLSGNKI-----KDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 18/136 (13%)
Query: 446 LTELELQSNYLQ-GNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSL--YLDLSN 502
+ EL L ++ G + L L+ LT I N+ L+ L+LS+
Sbjct: 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-----SIANLPKLNKLKKLELSD 73
Query: 503 NFLNDSLPLEVGNLQNLVELDISRNQVSG-EIPATLSACTSLEYLNLSYN------SFRG 555
N ++ L + NL L++S N++ L +L+ L+L +R
Sbjct: 74 NRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRE 133
Query: 556 GIPLSLSSLKSVKVLD 571
+ L + LD
Sbjct: 134 NV---FKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 515 NLQNLVELDISRNQVS-GEIPATLSACTSLEYLNLSYNSFRGGIPLS-LSSLKSVKVLDL 572
++ EL + ++ + G++ LE+L+ ++ L L +K L+L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS---IANLPKLNKLKKLEL 71
Query: 573 SSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
S N +SG + E L +LN+S N +
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L N G + + V++ + RNQ++ I ++ + N++
Sbjct: 34 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT-GIEPNAFEGASHIQELQLGENKIK- 91
Query: 411 TIPHEI-GKLTNLQLLYLDFNLLEGSIP---FSLGNLTLLTELELQSN 454
I +++ L L+ L L N + + F +L LT L L SN
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFE--HLNSLTSLNLASN 136
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 32/194 (16%), Positives = 77/194 (39%), Gaps = 12/194 (6%)
Query: 417 GKLTNLQLLYLDF---NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSL 473
+ ++ ++D + ++ L + L L L+ L I ++L +L+ L
Sbjct: 88 EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147
Query: 474 NVSQ-NKLTGALPKQIFNITTLSLYLDLS--NNFLNDSLPLEVG-NLQNLVELDIS--RN 527
N+S + + + + + + L+LS +F + + V + + +L++S R
Sbjct: 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 207
Query: 528 QVSGE-IPATLSACTSLEYLNLSYNSFRGGIPL-SLSSLKSVKVLDLSS-NNLSGQIPKY 584
+ + + C +L +L+LS + L ++ L LS ++ +
Sbjct: 208 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 267
Query: 585 LENLSFLEYLNISS 598
L + L+ L +
Sbjct: 268 LGEIPTLKTLQVFG 281
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 4e-07
Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 10/189 (5%)
Query: 421 NLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKL 480
+ + ++ + + S + L C L +L++ +L
Sbjct: 71 GVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRL 130
Query: 481 TGALPKQIFNITTLSLYLDLSN--NFLNDSLPLEVGNLQNLVELDISR-NQVS--GEIPA 535
+ + + + L + L+LS F +L + + L EL++S + A
Sbjct: 131 SDPIVNTLAKNSNL-VRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189
Query: 536 TLSACTSLEYLNLSYNSFR---GGIPLSLSSLKSVKVLDLSS-NNLSGQIPKYLENLSFL 591
++ LNLS + + ++ LDLS L + L++L
Sbjct: 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 249
Query: 592 EYLNISSNH 600
++L++S +
Sbjct: 250 QHLSLSRCY 258
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-05
Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 17/237 (7%)
Query: 370 LSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDF 429
LS + R+ + + + + T+ + + + LQ L L+
Sbjct: 68 LSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 127
Query: 430 NLLEGSIPFSLGNLTLLTELELQSNYLQGN--IPSSLGNCRSLLSLNVSQNK------LT 481
L I +L + L L L + + L +C L LN+S +
Sbjct: 128 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187
Query: 482 GALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISR-NQVSGEIPATLSAC 540
A+ IT L+L N L V NLV LD+S + +
Sbjct: 188 VAVAHVSETITQLNLS-GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246
Query: 541 TSLEYLNLSYNSFRGGIP----LSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEY 593
L++L+LS I L L + ++K L + G + E L L+
Sbjct: 247 NYLQHLSLSRCY---DIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQI 300
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 6/143 (4%)
Query: 461 PSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDS-LPLEVGNLQNL 519
P G S + + P ++DLSN+ + S L + L
Sbjct: 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 120
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLSYNSF--RGGIPLSLSSLKSVKVLDLSS-NN 576
L + ++S I TL+ ++L LNLS S + LSS + L+LS +
Sbjct: 121 QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180
Query: 577 LSGQIPKYL--ENLSFLEYLNIS 597
+ + + + LN+S
Sbjct: 181 FTEKHVQVAVAHVSETITQLNLS 203
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 1e-04
Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 15/194 (7%)
Query: 394 NLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDF--NLLEGSIPFSLGNLTLLTELEL 451
L NL+ ++ +L+ I + + K +NL L L E ++ L + + L EL L
Sbjct: 119 KLQNLS---LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNL 175
Query: 452 QSNYL---QGNIPSSLGNCRSLLSLNVS--QNKLTGALPKQIFNITTLSLYLDLSN-NFL 505
+ + + ++ LN+S + L + + ++LDLS+ L
Sbjct: 176 SWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 235
Query: 506 NDSLPLEVGNLQNLVELDISR-NQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSL 564
+ E L L L +SR + E L +L+ L + G + L +L
Sbjct: 236 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEAL 295
Query: 565 KSVKVLDLSSNNLS 578
L ++ ++ +
Sbjct: 296 PH---LQINCSHFT 306
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTG 410
L L GN+F ++P ++N T I++ N+IS T+ + N+ L + N+L
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLT-LIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLR- 91
Query: 411 TIPHEI-GKLTNLQLLYLDFNLLEGSIP---FSLGNLTLLTELELQSN 454
IP L +L+LL L N + +P F+ +L+ L+ L + +N
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFN--DLSALSHLAIGAN 136
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 420 TNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNK 479
++ LYLD N +P L N LT ++L +N + S N LL+L +S N+
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 480 LTGALPKQIFN-ITTLSLYLDLSNNFLNDSLP 510
L +P + F+ + +L L L N ++ +P
Sbjct: 90 LR-CIPPRTFDGLKSLR-LLSLHGNDIS-VVP 118
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 477 QNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPAT 536
NK LPK I LYLD N F +P E+ N ++L +D+S N++S +
Sbjct: 18 SNKGLKVLPKGIP-RDVTELYLD-GNQF--TLVPKELSNYKHLTLIDLSNNRISTLSNQS 73
Query: 537 LSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPK-YLENLSFLEYLN 595
S T L L LSYN R P + LKS+++L L N++S +P+ +LS L +L
Sbjct: 74 FSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLA 132
Query: 596 ISSN 599
I +N
Sbjct: 133 IGAN 136
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 4e-07
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 60/240 (25%)
Query: 711 MIGQGSFGFVYRGILGEGGLLVAVKVL-NLT--RKGAFKSFVAECEALRNIRHR-----N 762
+G G+FG V + AVKV+ N+ + A E + L+ I++ N
Sbjct: 42 KMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI----EADILKKIQNDDINNNN 97
Query: 763 LIKIIT-------ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
++K +C L++E + SL E + +N + I+
Sbjct: 98 IVKYHGKFMYYDHMC------------LIFEPL-GPSLYEIITRNNYN--GFHIEDIK-- 140
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
I+I A+ YL + H DLKP N+LLD + + T
Sbjct: 141 LYCIEILKALNYLRKMS---LTHTDLKPENILLDDP---YFEKSLITVRRVTDGKKIQIY 194
Query: 876 PSSSIGIK----G--------------TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFI 917
+ S GIK G T Y APE + ++ D++SFG +L E++
Sbjct: 195 RTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 4e-07
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
+ TTT + + NQI+ + G+ L L +D NQLT +P + KLT L L
Sbjct: 26 TGIPTTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQL 83
Query: 426 YLDFNLLEGSIP---FSLGNLTLLTELELQSN 454
L+ N L+ SIP F NL LT + L +N
Sbjct: 84 SLNDNQLK-SIPRGAFD--NLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 388 IPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP---FSLGNLT 444
+P+GI + NQ+T P +LT L L LD N L +P F LT
Sbjct: 24 VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFD--KLT 78
Query: 445 LLTELELQSNYLQ 457
LT+L L N L+
Sbjct: 79 QLTQLSLNDNQLK 91
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 5e-07
Identities = 50/239 (20%), Positives = 88/239 (36%), Gaps = 62/239 (25%)
Query: 711 MIGQGSFGFVYRGI-LGEGGLLVAVKVL-NLT--RKGAFKSFVAECEALRNIRHR---NL 763
+G+G+FG V I GG VAVK++ N+ + A E + L ++ +
Sbjct: 21 TLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS----EIQVLEHLNTTDPNST 76
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+ + + + HG +V+E + S +++ + L I+ +A I
Sbjct: 77 FRCVQMLEWFEHHG--HICIVFELL-GLSTYDFIKENGFLP--FRLDHIR--KMAYQICK 129
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVG-------------------DFGLAKF 864
++ +LH + + H DLKP N+L DFG A
Sbjct: 130 SVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-- 184
Query: 865 LYTCQVDDVETPSSSIGIKGTVGYV------APEYGMGSEASMAGDVYSFGILLLEMFI 917
D+ + V APE + S DV+S G +L+E ++
Sbjct: 185 ---TYDDEHHST-----------LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 5e-07
Identities = 35/219 (15%), Positives = 76/219 (34%), Gaps = 26/219 (11%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG 465
+L + L L+ + + FS L+ L +L L + + +
Sbjct: 36 KKLGKLGRQVLPPSELLDHLFFHYEF--QNQRFSAEVLSSLRQLNLAGVRMTPVKCTVVA 93
Query: 466 -----NCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLND------SLPLEVG 514
+L +N++ +L A + + + + L L N L L
Sbjct: 94 AVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH- 152
Query: 515 NLQNLVELDISRNQVSGE----IPATLSACTSLEYLNLSYNSFR--GGIPLS--LSSLKS 566
+ + L +S N ++ + L+ TS+ +L+L + G L+ L +
Sbjct: 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQ 212
Query: 567 VKVLDLSSNNLSGQ----IPKYLENLSFLEYLNISSNHF 601
++ L+++ N + + LE L++ N
Sbjct: 213 LQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-05
Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 26/185 (14%)
Query: 442 NLTLLTELELQSNYLQGNIPSSLGNC-RSLLSLNVSQNKLTGALPKQI-----FNITTLS 495
L E+ L S L +L L + N L K + + ++
Sbjct: 99 GRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQIT 158
Query: 496 LYLDLSNNFLNDS----LPLEVGNLQNLVELDISRNQVSGE----IPATLSACTSLEYLN 547
L LSNN L + L + ++ L + + E + A L L+ LN
Sbjct: 159 -TLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELN 217
Query: 548 LSYNSF--RGGIPLS--LSSLKSVKVLDLSSNNLS-------GQIPKYLENLSFLEYLNI 596
++YN + L+ S+++L L N LS + E + +
Sbjct: 218 VAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLT 277
Query: 597 SSNHF 601
Sbjct: 278 EGTAV 282
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 19/167 (11%)
Query: 449 LELQSN--YLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLN 506
L N L + + N +L + + KL + + L F N
Sbjct: 6 LLSAHNRAVLAQ-LGCPIKNLDALENAQAIKKKLGKLGRQVLPPSELLDHLFFH-YEFQN 63
Query: 507 DSLPLEVGNLQNLVELDISRNQVSGE----IPATLSACT-SLEYLNLSYNSF--RGGIPL 559
EV L +L +L+++ +++ + A L + +L+ +NL+ G L
Sbjct: 64 QRFSAEV--LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTL 121
Query: 560 SLSSLKSVKVLDLSSNNLSGQIPKYL-----ENLSFLEYLNISSNHF 601
L + L L N+L + K L + + L +S+N
Sbjct: 122 -LPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPL 167
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEI-GKLTNLQLL 425
A + T ++ + NQI+ + G+ +LVNL + N+LT IP + KLT L L
Sbjct: 29 AGIPTDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQL 86
Query: 426 YLDFNLLEGSIP---FSLGNLTLLTELELQSN 454
L+ N L+ SIP F NL LT + L +N
Sbjct: 87 DLNDNHLK-SIPRGAFD--NLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 388 IPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP---FSLGNLT 444
+P+GI + ++ NQ+T P L NLQ LY + N L +IP F LT
Sbjct: 27 VPAGI--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFD--KLT 81
Query: 445 LLTELELQSNYLQGNIP 461
LT+L+L N+L+ +IP
Sbjct: 82 QLTQLDLNDNHLK-SIP 97
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 6e-07
Identities = 48/397 (12%), Positives = 115/397 (28%), Gaps = 50/397 (12%)
Query: 242 NLSSLELLYLRGNRLIGSLPI-DIGLTLPKLTNFVIAENNFSGPIPNSFS----NTSNLV 296
LE L L + + I K+ ++ E++FS + ++L
Sbjct: 136 RADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195
Query: 297 MLDLNLNLFSGKVPINF-------SRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKL 349
+L+ + + I+ ++L + + + + F N +
Sbjct: 196 VLNFYM---TEFAKISPKDLETIARNCRSLVSVKVGDFEI----LELVGFFKAAANLEEF 248
Query: 350 IALGLYGNRFGGVLPHSIANLST-TTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQL 408
L + ++ + ++ + + L+
Sbjct: 249 CGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLY--ALLE 306
Query: 409 TGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLG--- 465
T I K NL++L + + + L L ++ + + G
Sbjct: 307 TEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVS 366
Query: 466 ---------NCRSLLSLNVSQNKLT----GALPKQIFNITTLSLYLDLSNNFLNDSLPLE 512
C+ L + V + +T ++ + N+ L + L LPL+
Sbjct: 367 QRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL-VLLDREERITDLPLD 425
Query: 513 VG------NLQNLVELDISRN--QVSGE-IPATLSACTSLEYLNLSYNSFR-GGIPLSLS 562
G + L ++ + ++ ++ L Y G+
Sbjct: 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSR 485
Query: 563 SLKSVKVLDLSSNNLSGQ-IPKYLENLSFLEYLNISS 598
+++ L++ S + I + L L YL +
Sbjct: 486 GCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQG 522
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 6e-04
Identities = 50/313 (15%), Positives = 96/313 (30%), Gaps = 28/313 (8%)
Query: 343 LTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQI---NMGRNQISGT-----IPSGIGN 394
L + L +GG + + +S Q+ + R +S + +
Sbjct: 80 LKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADD 139
Query: 395 LVNLNGFGIDLNQLTGTIPHEIGK-LTNLQLLYLDFNLLEGSIPFSLG----NLTLLTEL 449
L L T I ++ L ++ + L + T L L
Sbjct: 140 LETLKLDKCS--GFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197
Query: 450 ELQSNYLQGNIPSSL----GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFL 505
P L NCRSL+S+ V ++ F +
Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE--LVGFFKAAANLEEFCGGSLNE 255
Query: 506 NDSLPLEVGNLQNLVELDISRNQVSG--EIPATLSACTSLEYLNLSYNSFRGGIPLSL-S 562
+ +P + NL +L G E+P + L+L Y +L
Sbjct: 256 DIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQ 315
Query: 563 SLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISS-NHFEGKVPTKGVFSNKTRISLSG 621
+++VL+ + + + L+ L I +G +G+ S + I+L+
Sbjct: 316 KCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALA- 374
Query: 622 NGKLCGGLYELQL 634
+ C L + +
Sbjct: 375 --QGCQELEYMAV 385
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 5e-06
Identities = 64/424 (15%), Positives = 141/424 (33%), Gaps = 32/424 (7%)
Query: 173 RLEKLSIAD-NHLTGQLPASIG-NLSVLKVINVEENRLSGRIPNTLGQLRNSF----YLN 226
+ L ++ + A+I LK +++ E+ + + L +++ LN
Sbjct: 131 NFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLN 190
Query: 227 IAGNQFSGNVPPS-----IYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFV------ 275
I+ + V S + +L+ L L + L + P+L
Sbjct: 191 ISC--LASEVSFSALERLVTRCPNLKSLKLNRAVPLEKL-ATLLQRAPQLEELGTGGYTA 247
Query: 276 IAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAAN 335
+ + + S L L + +P +S L+ L L+ +
Sbjct: 248 EVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATV-----Q 302
Query: 336 DLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNL 395
D + L C KL L + + +A+ ++ + ++ P+
Sbjct: 303 SYDLVKLLCQCPKLQRLWVL-DYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTE 361
Query: 396 VNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNY 455
L + +L ++ + ++TN L+ + N + F L + L
Sbjct: 362 QGLVSVSMGCPKLE-SVLYFCRQMTNAALITIARNRPNMTR-FRLCIIEPKAPDYLTLEP 419
Query: 456 LQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLND-SLPLEVG 514
L + + +C+ L L++S LT + + I L ++ +D + +
Sbjct: 420 LDIGFGAIVEHCKDLRRLSLS-GLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS 478
Query: 515 NLQNLVELDISRNQVSGE-IPATLSACTSLEYLNLSYNSF-RGGIPLSLSSLKSVKVLDL 572
+L +L+I + + A S ++ L +S S G L + + V +
Sbjct: 479 GCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVI 538
Query: 573 SSNN 576
Sbjct: 539 DERG 542
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 1e-05
Identities = 37/230 (16%), Positives = 71/230 (30%), Gaps = 20/230 (8%)
Query: 418 KLTNLQLLYLDFNLLEGSIPFSLG----NLTLLTELELQSNYLQ---GNIPSSLGNCRSL 470
NL+ L L + ++ L T L L + + + + C +L
Sbjct: 154 TCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNL 213
Query: 471 LSLNVSQNKLTGALPKQIFNITTL-----SLYLDLSNNFLNDSLPLEVGNLQNLVELDIS 525
SL +++ L + L Y + L + + + L L
Sbjct: 214 KSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGF 273
Query: 526 RNQVSGEIPATLSACTSLEYLNLSYNSFRG-GIPLSLSSLKSVKVLDLSSNNLSGQIPKY 584
+ V +PA S C+ L LNLSY + + + L ++ L + +
Sbjct: 274 WDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVL 333
Query: 585 LENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQL 634
L L + + V ++ G + G +L+
Sbjct: 334 ASTCKDLRELRVFPSE-------PFVMEPNVALTEQGLVSVSMGCPKLES 376
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 56/402 (13%), Positives = 109/402 (27%), Gaps = 67/402 (16%)
Query: 242 NLSSLELLYLRGNRLIGSLPI-DIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDL 300
+ + ++L L + + I T L + E++ + S+ + +
Sbjct: 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187
Query: 301 NLNLFSGKVPINFSRLQNLSWLL--LAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNR 358
+LN+ ++FS L+ L L L N A T L +L LG
Sbjct: 188 SLNISCLASEVSFSALERLVTRCPNLKSLKL-NRAVPLEKLATLLQRAPQLEELGT---- 242
Query: 359 FGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGK 418
V + SG L L+GF + +P
Sbjct: 243 ------GGYTAEVRPDVYSGLS------VALSGCKELRCLSGFWDAVPA---YLPAVYSV 287
Query: 419 LTNLQLLYLDF-NLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQ 477
+ L L L + + + L L L + + C+ L L V
Sbjct: 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFP 347
Query: 478 NKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATL 537
++ ++ + L L + Q++ T+
Sbjct: 348 SE---------------PFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392
Query: 538 SA-CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNI 596
+ ++ L I +++ LD+ + +E+ L L++
Sbjct: 393 ARNRPNMTRFRLC------IIEPKAPDYLTLEPLDIGFGAI-------VEHCKDLRRLSL 439
Query: 597 SSNHFEGKVPTKGVFSNKTRISLSGNGKLCGGLYELQLPSCG 638
S T G + L + G
Sbjct: 440 SGLL--------------TDKVFEYIGTYAKKMEMLSVAFAG 467
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* Length = 263 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH---C 832
H +D Y + L E + N+ D + D ++L
Sbjct: 122 HSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEE 181
Query: 833 QPPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
+ HGDL SN+ + V+ D G +
Sbjct: 182 ELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A Length = 176 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 507 DSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLS-LSSL- 564
+ LP + + +D + + + + +E + L + L LS L
Sbjct: 51 NHLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLE 110
Query: 565 ---KSVKVLDLSSN-NLSGQIPKYLENLSFLEYLNIS 597
KS+ +++ S N++ + L + L+YL +S
Sbjct: 111 NLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLS 147
|
| >4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4ej7_A* 3r78_A* Length = 272 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 6/91 (6%)
Query: 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPP 835
H + + + L + + + D S + + +H
Sbjct: 133 HSIPVCNCPFNSDRVFRLAQAQSR--MNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFS 190
Query: 836 ----IIHGDLKPSNVLLDHDMVAHVGDFGLA 862
+ HGD N++ D + D G
Sbjct: 191 PDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV 221
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1019 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-56 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 7e-52 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 6e-51 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-49 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-49 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-49 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 7e-49 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-48 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 8e-48 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-47 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 3e-47 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 7e-47 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-46 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-45 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-45 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-45 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-45 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-45 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-45 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-45 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-44 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-43 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 6e-43 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-43 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-42 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-42 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 6e-42 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-41 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-41 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-40 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-40 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 6e-40 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-39 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-38 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-37 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-37 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-37 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-36 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-36 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-36 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-36 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-36 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-36 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 5e-36 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-35 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-35 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 5e-35 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-34 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-34 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-33 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 6e-33 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-32 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 8e-32 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-31 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-31 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-30 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-30 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-30 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-20 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-29 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-29 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-28 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-28 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 8e-28 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-24 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-22 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-17 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 1e-13 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 7e-20 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-19 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-18 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 7e-16 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-14 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 3e-08 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-19 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-13 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-12 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 3e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 9e-07 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 8e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 1e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.001 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.003 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-05 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 4e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 2e-05 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 8e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-06 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 2e-05 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 5e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.001 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.001 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 1e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 8e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 3e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.002 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 0.003 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 7e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.003 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.001 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.003 | |
| d1nd4a_ | 255 | d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferas | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (492), Expect = 4e-56
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 27/251 (10%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHR 761
G+ + IG GSFG VY+G VAVK+LN+T ++F E LR RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
N++ + ++ A+V ++ + SL LH + +I+ + IA
Sbjct: 65 NILLFMGYSTA------PQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQT 113
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A ++YLH IIH DLK +N+ L D+ +GDFGLA
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVK-----SRWSGSHQFEQ 165
Query: 882 IKGTVGYVAPEYGMGSEA---SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMK 938
+ G++ ++APE + S DVY+FGI+L E+ + P ++ N I
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 939 ALPQRVIEIVD 949
L + ++
Sbjct: 226 YLSPDLSKVRS 236
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 182 bits (462), Expect = 7e-52
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 28/240 (11%)
Query: 695 SYAELSKATGEFSTS---------NMIGQGSFGFVYRGIL---GEGGLLVAVKVLNLTR- 741
++ + ++A EF+ +IG G FG V G L G+ + VA+K L
Sbjct: 8 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 67
Query: 742 KGAFKSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSN 801
+ + F++E + H N+I + + + ++ E+M+NGSL+ +L ++
Sbjct: 68 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-----MIITEFMENGSLDSFLRQND 122
Query: 802 DQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGL 861
Q V IQ + + IA ++YL +H DL N+L++ ++V V DFGL
Sbjct: 123 GQFTV-----IQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGL 174
Query: 862 AKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
++FL D T S++G K + + APE + + A DV+S+GI++ E+
Sbjct: 175 SRFLEDDTSDPTYT--SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 232
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (457), Expect = 6e-51
Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 699 LSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKS-FVAECEALRN 757
+ +F + +G G+ G V++ GL++A K+++L K A ++ + E + L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 758 IRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
++ S ++ E+M GSL++ L + + +
Sbjct: 61 CNSPYIVGFYGAFYSDGEI-----SICMEHMDGGSLDQVLKKAGR------IPEQILGKV 109
Query: 818 AIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPS 877
+I + + YL I+H D+KPSN+L++ + DFG++ L +
Sbjct: 110 SIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 162
Query: 878 SSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT Y++PE G+ S+ D++S G+ L+EM + + P
Sbjct: 163 ----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (443), Expect = 1e-49
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 17/230 (7%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRN 757
S+A ++ IG GS+G + G ++ K L+ + + V+E LR
Sbjct: 1 SRAE-DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 59
Query: 758 IRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHI 817
++H N+++ + + +V EY + G L + + L L +
Sbjct: 60 LKHPNIVRYYDRIIDRTNTTL---YIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRV 114
Query: 818 AIDIAYAIEYLHHH--CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
+ A++ H ++H DLKP+NV LD +GDFGLA+ L
Sbjct: 115 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-------HD 167
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
S + GT Y++PE + D++S G LL E+ P +
Sbjct: 168 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 217
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 1e-49
Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 23/268 (8%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITI 769
IG+GSF VY+G+ E + VA L + K + F E E L+ ++H N+++
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
S LV E M +G+L+ +L + + I +++LH
Sbjct: 77 WESTVKGK-KCIVLVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLH 129
Query: 830 HHCQPPIIHGDLKPSNVLL-DHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
PPIIH DLK N+ + +GD GLA S + + GT +
Sbjct: 130 TRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---------RASFAKAVIGTPEF 179
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIV 948
+APE + + DVY+FG+ +LEM + P N P ++
Sbjct: 180 MAPEM-YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA 238
Query: 949 DPLLLLEVRTNNSKNPCGDGRGGIEECL 976
P + + +N D R I++ L
Sbjct: 239 IPEVKEIIEGCIRQNK--DERYSIKDLL 264
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 2e-49
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+G G FG V+ G G VAVK L +F+AE ++ ++H+ L+
Sbjct: 14 TLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLV 71
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ + + + ++ EYM+NGSL ++L + L++ + L +A IA
Sbjct: 72 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIK----LTINKLLDMAAQIAEG 121
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ ++ IH DL+ +N+L+ + + DFGLA+ + + + G K
Sbjct: 122 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT------AREGAKF 172
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933
+ + APE ++ DV+SFGILL E+ R + I
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (440), Expect = 7e-49
Identities = 66/305 (21%), Positives = 113/305 (37%), Gaps = 34/305 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+G FG V+RG G VAVK+ + + ++ AE +RH N++ I +
Sbjct: 11 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIAADN 67
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ LV +Y ++GSL ++L+ +++ + +A+ A + +LH
Sbjct: 68 KDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHME 119
Query: 832 C-----QPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
+P I H DLK N+L+ + + D GLA + GT
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH---DSATDTIDIAPNHRVGTK 176
Query: 887 GYVAPEYGMGS------EASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKAL 940
Y+APE S E+ D+Y+ G++ E+ R + +
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ---LPYYDLVP 233
Query: 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRN 1000
+E + +V P R E L + I C + R L
Sbjct: 234 SDPSVEE-----MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR-LTALR 287
Query: 1001 VVAKL 1005
+ L
Sbjct: 288 IKKTL 292
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (433), Expect = 3e-48
Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 50/301 (16%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+GQG FG V+ G G VA+K L ++F+ E + ++ +RH L+
Sbjct: 18 SLRLEVKLGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLV 75
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ + S + +V EYM GSL ++L ++ Q + +A IA
Sbjct: 76 QLYAVVS------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASG 125
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ Y+ +H DL+ +N+L+ ++V V DFGLA+ + + ++ G K
Sbjct: 126 MAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY------TARQGAKF 176
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944
+ + APE + ++ DV+SFGILL E+ + R + V
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------------NREV 223
Query: 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004
++ V+ + EC ++ + C + P +R + A
Sbjct: 224 LDQVERGYRMPCP---------------PECPESLHDLMCQCWRKEPEER-PTFEYLQAF 267
Query: 1005 L 1005
L
Sbjct: 268 L 268
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (431), Expect = 8e-48
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 712 IGQGSFGFVYRGIL--GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G G+FG V +G+ + + VA+KVL T K + + E + + + + ++++I
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 76
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+C + LV E G L ++L ++ + + + ++ ++YL
Sbjct: 77 VCQAEA------LMLVMEMAGGGPLHKFLVGKREE-----IPVSNVAELLHQVSMGMKYL 125
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
+H DL NVLL + A + DFGL+K L ++ K + +
Sbjct: 126 EEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD----SYYTARSAGKWPLKW 178
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
APE + S DV+S+G+ + E +
Sbjct: 179 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 211
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (430), Expect = 2e-47
Identities = 68/310 (21%), Positives = 121/310 (39%), Gaps = 48/310 (15%)
Query: 709 SNMIGQGSFGFVYRGILGEG---GLLVAVKVLN-LTRKGAFKSFVAECEALRNIRHRNLI 764
+ +IG+G FG VY G L + + AVK LN +T G F+ E +++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ IC + +V YM++G L ++ + V D + + +A
Sbjct: 92 SLLGICLRSEGS----PLVVLPYMKHGDLRNFIRNETHNPTVKD-----LIGFGLQVAKG 142
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ +H DL N +LD V DFGLA+ +Y + ++ + G K
Sbjct: 143 ---MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD---KEFDSVHNKTGAKL 196
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944
V ++A E + + DV+SFG+LL E+ R P + + + L R
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGR- 251
Query: 945 IEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMRNVVAK 1004
++ P E C + + + C R +V++
Sbjct: 252 -RLLQP----------------------EYCPDPLYEVMLKCWHPKAEMR-PSFSELVSR 287
Query: 1005 LCAAREAFLS 1014
+ A F+
Sbjct: 288 ISAIFSTFIG 297
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (426), Expect = 3e-47
Identities = 67/306 (21%), Positives = 128/306 (41%), Gaps = 51/306 (16%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIR 759
+ +IG G FG VY+G+L G+ + VA+K L + F+ E +
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
H N+I++ + S ++ EYM+NG+L+++L + + S++Q + +
Sbjct: 68 HHNIIRLEGVISKYKPM-----MIITEYMENGALDKFLREKD-----GEFSVLQLVGMLR 117
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
IA + + +H DL N+L++ ++V V DFGL++ L DD E ++
Sbjct: 118 GIAAGM---KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE----DDPEATYTT 170
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939
G K + + APE + + A DV+SFGI++ E+ +
Sbjct: 171 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS------------ 218
Query: 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDRTLEMR 999
V++ ++ L +C A+ + + C + R +
Sbjct: 219 -NHEVMKAINDGFRLPT---------------PMDCPSAIYQLMMQCWQQERARR-PKFA 261
Query: 1000 NVVAKL 1005
++V+ L
Sbjct: 262 DIVSIL 267
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 167 bits (424), Expect = 7e-47
Identities = 72/319 (22%), Positives = 132/319 (41%), Gaps = 50/319 (15%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
M+ P +Y + + + + +G G +G VY G+ + L VAVK L +
Sbjct: 2 MDPSSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-E 58
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDV 806
F+ E ++ I+H NL++++ +C+ ++ E+M G+L ++L N Q
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFY-----IITEFMTYGNLLDYLRECNRQE-- 111
Query: 807 CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
+S + L++A I+ A+EYL IH DL N L+ + + V DFGL++ +
Sbjct: 112 --VSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166
Query: 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF 926
+T ++ G K + + APE ++ S+ DV++FG+LL E+
Sbjct: 167 G------DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 220
Query: 927 NDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLC 986
+ +V E+++ +E E C V + C
Sbjct: 221 D-------------LSQVYELLEKDYRMER---------------PEGCPEKVYELMRAC 252
Query: 987 SMESPIDRTLEMRNVVAKL 1005
+P DR +
Sbjct: 253 WQWNPSDR-PSFAEIHQAF 270
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 9e-46
Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 29/245 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
E IG+G FG V G G VAVK + ++F+AE + +RH NL+
Sbjct: 8 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLV 63
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+++ + +V EYM GSL ++L L L ++D+ A
Sbjct: 64 QLLGVIVEEKGG----LYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEA 115
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYL + +H DL NVL+ D VA V DFGL K S+ K
Sbjct: 116 MEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA----------SSTQDTGKL 162
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRV 944
V + APE + S DV+SFGILL E++ R + + + +
Sbjct: 163 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYK 218
Query: 945 IEIVD 949
++ D
Sbjct: 219 MDAPD 223
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (414), Expect = 1e-45
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 23/216 (10%)
Query: 710 NMIGQGSFGFVYRGIL--GEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIRHRNLIK 765
+G G+FG V +G + VAVK+L +AE ++ + + +++
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+I IC + LV E + G L ++L + + + + ++ +
Sbjct: 73 MIGICE------AESWMLVMEMAELGPLNKYLQQNRH------VKDKNIIELVHQVSMGM 120
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
+YL +H DL NVLL A + DFGL+K L D + K
Sbjct: 121 KYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR----ADENYYKAQTHGKWP 173
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
V + APE + S DV+SFG+L+ E F +
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (412), Expect = 1e-45
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
+ + +G G FG V G G VA+K++ F+ E + + N+ H L+
Sbjct: 5 DLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 62
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ +C+ ++ EYM NG L +L + Q L + D+ A
Sbjct: 63 QLYGVCTKQRPI-----FIITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEA 112
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYL +H DL N L++ V V DFGL++++ + +SS+G K
Sbjct: 113 MEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------DEYTSSVGSKF 163
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933
V + PE M S+ S D+++FG+L+ E++ + F + T
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 2e-45
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG VY+ E +L A KV++ + + ++ E + L + H N++K++
Sbjct: 20 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 79
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
++ ++ E+ G+++ + L+ Q + A+ YLH +
Sbjct: 80 YENNL-----WILIEFCAGGAVDAVMLELERP-----LTESQIQVVCKQTLDALNYLHDN 129
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAP 891
IIH DLK N+L D + DFG++ T GT ++AP
Sbjct: 130 ---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT-------RTIQRRDSFIGTPYWMAP 179
Query: 892 EYGMGSEA-----SMAGDVYSFGILLLEMFIRKRPTDSM 925
E M + DV+S GI L+EM + P +
Sbjct: 180 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 218
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 163 bits (414), Expect = 3e-45
Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 31/228 (13%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK---GAFKSFVAECEALRNIRHRN 762
FS IG GSFG VY +VA+K ++ + K ++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
I+ + LV EY + + H L ++ +
Sbjct: 77 TIQYRGCYLREHTA-----WLVMEYCLGSASDLLEVHKKP------LQEVEIAAVTHGAL 125
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ YLH H +IH D+K N+LL + +GDFG A +
Sbjct: 126 QGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS-----------F 171
Query: 883 KGTVGYVAPEYGMGS---EASMAGDVYSFGILLLEMFIRKRPTDSMFN 927
GT ++APE + + DV+S GI +E+ RK P +M
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 162 bits (411), Expect = 5e-45
Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 29/291 (9%)
Query: 687 MEQQFPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFK 746
+E+ IVS + K +++ IGQG+ G VY + G VA++ +NL ++ +
Sbjct: 6 LEKLRSIVSVGDPKK---KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 747 SFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDV 806
+ E +R ++ N++ + D +V EY+ GSL + + +
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDEL-----WVVMEYLAGGSLTDVVTETCMDEG- 116
Query: 807 CDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLY 866
Q + + A+E+LH + +IH D+K N+LL D + DFG +
Sbjct: 117 ------QIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167
Query: 867 TCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMF 926
Q S + GT ++APE D++S GI+ +EM + P +
Sbjct: 168 PEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE- 219
Query: 927 NDGLTIHEFAMKALPQ-RVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
N ++ A P+ + E + + + + + RG +E L
Sbjct: 220 NPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDV--EKRGSAKELL 268
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (408), Expect = 7e-45
Identities = 59/275 (21%), Positives = 102/275 (37%), Gaps = 23/275 (8%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRN 762
++ +G+G++G V + VAVK++++ R ++ E + + H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIA 822
++K + + L EY G L + + + +
Sbjct: 65 VVKFYGHR-----REGNIQYLFLEYCSGGELFDRIEPDIG------MPEPDAQRFFHQLM 113
Query: 823 YAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGI 882
+ YLH I H D+KP N+LLD + DFGLA + + +
Sbjct: 114 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KM 165
Query: 883 KGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALP 941
GT+ YVAPE E + DV+S GI+L M + P D + ++ K
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 225
Query: 942 QRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
+ +D L + +NP R I +
Sbjct: 226 LNPWKKIDSAPLALLHKILVENP--SARITIPDIK 258
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (407), Expect = 7e-45
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 21/229 (9%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLI 764
E + IG G FG V+ G VA+K + + F+ E E + + H L+
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 63
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ +C LV+E+M++G L ++L L + +D+
Sbjct: 64 QLYGVCLE-----QAPICLVFEFMEHGCLSDYLRTQRGLFAAE-----TLLGMCLDVCEG 113
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ + + +IH DL N L+ + V V DFG+ +F+ Q +SS G K
Sbjct: 114 ---MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY------TSSTGTKF 164
Query: 885 TVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933
V + +PE S S DV+SFG+L+ E+F + ++ +
Sbjct: 165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (404), Expect = 2e-44
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 26/224 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F +G+G FG VY + ++A+KVL L + G E E ++RH
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
N++++ L+ EY G++ L + + ++
Sbjct: 67 NILRLYGYFHDATRV-----YLILEYAPLGTVYRELQKLSK------FDEQRTATYITEL 115
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A A+ Y H +IH D+KP N+LL + DFG + + + +
Sbjct: 116 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-------- 164
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
GT+ Y+ PE G D++S G+L E + K P ++
Sbjct: 165 -CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 207
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (402), Expect = 1e-43
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 41/271 (15%)
Query: 691 FPIVSYAELSKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR---KGAFKS 747
+P++ + + ++IG+G+FG V + + + GL + + + K +
Sbjct: 4 YPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56
Query: 748 FVAECEALRNI-RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLH-------- 798
F E E L + H N+I ++ C + L EY +G+L ++L
Sbjct: 57 FAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 111
Query: 799 --HSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHV 856
+ LS Q LH A D+A + + Q IH DL N+L+ + VA +
Sbjct: 112 PAFAIANSTASTLSSQQLLHFAADVARG---MDYLSQKQFIHRDLAARNILVGENYVAKI 168
Query: 857 GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMF 916
DFGL++ E + V ++A E S + DV+S+G+LL E+
Sbjct: 169 ADFGLSRG--------QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220
Query: 917 IRKRPTDSMFNDGLTIHEFAMKALPQRVIEI 947
G+T E K +E
Sbjct: 221 SLGGT----PYCGMTCAELYEKLPQGYRLEK 247
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (397), Expect = 6e-43
Identities = 54/272 (19%), Positives = 98/272 (36%), Gaps = 37/272 (13%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGG-----LLVAVKVLNLT-RKGAFKSFVAECEALRNI 758
++G G+FG V + VAVK+L ++ ++E + + +
Sbjct: 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97
Query: 759 -RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQ-------------- 803
H N++ ++ C+ L++EY G L +L ++
Sbjct: 98 GSHENIVNLLGACTLSGPI-----YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152
Query: 804 ---HDVCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFG 860
D+ L+ L A +A +E+L +H DL NVL+ H V + DFG
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFG 209
Query: 861 LAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKR 920
LA+ + + V + V ++APE ++ DV+S+GILL E+F
Sbjct: 210 LARDIMSDSNYVVRG-----NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 264
Query: 921 PTDSMFNDGLTIHEFAMKALPQRVIEIVDPLL 952
++ +
Sbjct: 265 NPYPGIPVDANFYKLIQNGFKMDQPFYATEEI 296
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 156 bits (395), Expect = 7e-43
Identities = 64/335 (19%), Positives = 115/335 (34%), Gaps = 66/335 (19%)
Query: 695 SYAELSKATGEFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNL-TRKGAFKSF 748
L IG+G+FG V++ E +VAVK+L F
Sbjct: 4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63
Query: 749 VAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD 808
E + + N++K++ +C+ L++EYM G L E+L +
Sbjct: 64 QREAALMAEFDNPNIVKLLGVCAVGKPM-----CLLFEYMAYGDLNEFLRSMSPHTVCSL 118
Query: 809 ------------------LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDH 850
LS ++L IA +A + YL +H DL N L+
Sbjct: 119 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGE 175
Query: 851 DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGI 910
+MV + DFGL++ +Y+ + + ++ PE + + DV+++G+
Sbjct: 176 NMVVKIADFGLSRNIYSADYYKADG-----NDAIPIRWMPPESIFYNRYTTESDVWAYGV 230
Query: 911 LLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRG 970
+L E+F G+ E ++
Sbjct: 231 VLWEIFSYGLQ----PYYGMAHEEVIYYVRDGNILACP---------------------- 264
Query: 971 GIEECLVAVITIGVLCSMESPIDRTLEMRNVVAKL 1005
E C + + + LC + P DR ++ L
Sbjct: 265 --ENCPLELYNLMRLCWSKLPADR-PSFCSIHRIL 296
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 157 bits (397), Expect = 1e-42
Identities = 51/276 (18%), Positives = 99/276 (35%), Gaps = 42/276 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG V+R G A K + + ++ E + + +RH L+ +
Sbjct: 34 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 93
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
+ ++YE+M G L E + +++ +S + + + + ++H +
Sbjct: 94 DDNEM-----VMIYEFMSGGELFEKVADEHNK-----MSEDEAVEYMRQVCKGLCHMHEN 143
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
+H DLKP N++ + DFGL L + S GT +
Sbjct: 144 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--------DPKQSVKVTTGTAEFA 192
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM---------FNDGLTIHEFAMKAL 940
APE G D++S G+L + P + + + A +
Sbjct: 193 APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI 252
Query: 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
+ + + LL +P + R I + L
Sbjct: 253 SEDGKDFIRKLL--------LADP--NTRMTIHQAL 278
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (392), Expect = 2e-42
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 28/248 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGG----LLVAVKVLNL-TRKGAFKSFVAECEALRNIR 759
EF ++G G+FG VY+G+ G + VA+K L T A K + E + ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
+ ++ +++ IC + L+ + M G L +++ D L+ +
Sbjct: 70 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNI-----GSQYLLNWCV 118
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSS 879
IA + YL ++H DL NVL+ + DFGLAK L E +
Sbjct: 119 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHA 170
Query: 880 IGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKA 939
G K + ++A E + + DV+S+G+ + E+ DG+ E +
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----PYDGIPASEISSIL 226
Query: 940 LPQRVIEI 947
+
Sbjct: 227 EKGERLPQ 234
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 6e-42
Identities = 54/268 (20%), Positives = 95/268 (35%), Gaps = 32/268 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTRK-GAFKSFVAECEALRNI 758
S +G G+FG V + + VAVK+L + ++ ++E + L +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 759 -RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD--------- 808
H N++ ++ C+ ++ EY G L +L D
Sbjct: 84 GNHMNIVNLLGACTIGGPT-----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 809 ---LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
L L L + +A + +L IH DL N+LL H + + DFGLA+ +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDI 195
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM 925
V+ + V ++APE + DV+S+GI L E+F
Sbjct: 196 KNDSNYVVKGN-----ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250
Query: 926 FNDGLTIHEFAMKALPQRVIEIVDPLLL 953
++ + E +
Sbjct: 251 MPVDSKFYKMIKEGFRMLSPEHAPAEMY 278
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 1e-41
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 22/220 (10%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F ++G+GSF V A+K+L + ++ E + + + H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
+K+ + Y +NG L +++ +I
Sbjct: 69 FFVKLYFTFQDDEKL-----YFGLSYAKNGELLKYIRKIGS------FDETCTRFYTAEI 117
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
A+EYLH IIH DLKP N+LL+ DM + DFG AK + + ++S
Sbjct: 118 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKV---LSPESKQARANS-- 169
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
GT YV+PE A + D+++ G ++ ++ P
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (382), Expect = 2e-41
Identities = 60/223 (26%), Positives = 88/223 (39%), Gaps = 24/223 (10%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL---GEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNI 758
+ +G GSFG V RG + VAVK L L++ A F+ E A+ ++
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
HRNLI++ + + +V E GSL + L L A
Sbjct: 69 DHRNLIRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGH-----FLLGTLSRYA 117
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ +A + YL IH DL N+LL + +GDFGL + L + +
Sbjct: 118 VQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHYVM 170
Query: 879 SIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
K + APE S A D + FG+ L EMF +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 148 bits (375), Expect = 2e-40
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 17/225 (7%)
Query: 700 SKATGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALR 756
S + + ++G G V+ VAVKVL + F E +
Sbjct: 3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 62
Query: 757 NIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLH 816
+ H ++ + + ++ +V EY+ +L + +H ++ + +
Sbjct: 63 ALNHPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIE 115
Query: 817 IAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETP 876
+ D A+ + H + IIH D+KP+N+++ V DFG+A+ + D +
Sbjct: 116 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA----DSGNSV 168
Query: 877 SSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ + + GT Y++PE G DVYS G +L E+ + P
Sbjct: 169 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 213
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (377), Expect = 2e-40
Identities = 57/311 (18%), Positives = 116/311 (37%), Gaps = 52/311 (16%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI 758
+ + S +GQGSFG VY G+ E VA+K +N F+ E ++
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHD----VCDLSLIQR 814
++++++ + S ++ E M G L+ +L + SL +
Sbjct: 81 NCHHVVRLLGVVSQGQPT-----LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135
Query: 815 LHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVE 874
+ +A +IA + YL+ + +H DL N ++ D +GDFG+ + +Y + +
Sbjct: 136 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETD 187
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHE 934
V +++PE + DV+SFG++L E+ GL+ +
Sbjct: 188 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ----PYQGLSNEQ 243
Query: 935 FAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVITIGVLCSMESPIDR 994
+ +++ D C + + +C +P R
Sbjct: 244 VLRFVMEGGLLDKPD------------------------NCPDMLFELMRMCWQYNPKMR 279
Query: 995 TLEMRNVVAKL 1005
+++ +
Sbjct: 280 -PSFLEIISSI 289
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 6e-40
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 711 MIGQGSFGFVYRGIL---GEGGLLVAVKVL-NLTRKGAFKSFVAECEALRNIRHRNLIKI 766
IG+G FG V++GI L VA+K N T + F+ E +R H +++K+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
I + + + ++ E G L +L L L + A ++ A
Sbjct: 74 IGVITE------NPVWIIMELCTLGELRSFLQVRK-----YSLDLASLILYAYQLSTA-- 120
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
L + +H D+ NVL+ + +GDFGL++++ T + K +
Sbjct: 121 -LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED------STYYKASKGKLPI 173
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND 928
++APE + A DV+ FG+ + E+ + +
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 147 bits (371), Expect = 4e-39
Identities = 49/276 (17%), Positives = 93/276 (33%), Gaps = 42/276 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G+FG V+R + G + K +N + E + + H LI +
Sbjct: 37 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 96
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
L+ E++ G L + + + + +S + ++ ++++H H
Sbjct: 97 DKYEM-----VLILEFLSGGELFDRIAAEDYK-----MSEAEVINYMRQACEGLKHMHEH 146
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
I+H D+KP N++ + + V DFGLA L T +
Sbjct: 147 ---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL--------NPDEIVKVTTATAEFA 195
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDS---------MFNDGLTIHEFAMKAL 940
APE D+++ G+L + P + E A ++
Sbjct: 196 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 255
Query: 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
+ + LL K P R + + L
Sbjct: 256 SPEAKDFIKNLL--------QKEP--RKRLTVHDAL 281
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 142 bits (359), Expect = 4e-38
Identities = 53/228 (23%), Positives = 84/228 (36%), Gaps = 18/228 (7%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNL 763
+ IG GSFG +Y G G VA+K+ K E + + ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC--VKTKHPQLHIESKIYKMMQGGVG 64
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
I I C + + V +V E + + + S SL L +A +
Sbjct: 65 IPTIRWCGAEGDYNV----MVMELLGPSLEDLFNFCSRK------FSLKTVLLLADQMIS 114
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVL---LDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
IEY+H IH D+KP N L + ++ DFGLAK + +
Sbjct: 115 RIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK 171
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND 928
+ GT Y + +G E S D+ S G +L+ + P +
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA 219
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 143 bits (361), Expect = 1e-37
Identities = 53/282 (18%), Positives = 97/282 (34%), Gaps = 33/282 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR------KGAFKSFVAECEALRNI 758
+FS +IG+G FG VY + G + A+K L+ R + + +
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
++ + + D + + + M G L L + A
Sbjct: 65 DCPFIVCMSYAFHTPDKL-----SFILDLMNGGDLHYHLSQHGVFSE------ADMRFYA 113
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+I +E++H+ +++ DLKP+N+LLD + D GLA +
Sbjct: 114 AEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF---------SKKK 161
Query: 879 SIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAM 937
GT GY+APE A + D +S G +L ++ P +
Sbjct: 162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 221
Query: 938 KALPQRVIEIVDPLLLLEVRTNNSKNP---CGDGRGGIEECL 976
+ + + P L + ++ G G +E
Sbjct: 222 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 263
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 1e-37
Identities = 55/276 (19%), Positives = 103/276 (37%), Gaps = 43/276 (15%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G+G FG V+R + K + + E L RHRN++ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-VLVKKEISILNIARHRNILHLHESFE 71
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
S++ +++E++ + E ++ S + L+ + + + A+++LH H
Sbjct: 72 SMEEL-----VMIFEFISGLDIFERINTSAFE-----LNEREIVSYVHQVCEALQFLHSH 121
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHV--GDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
I H D++P N++ + + +FG A+ L + + + Y
Sbjct: 122 ---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL--------KPGDNFRLLFTAPEYY 170
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKRP---------TDSMFNDGLTIHEFAMKAL 940
APE S A D++S G L+ + P +++ N T E A K +
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230
Query: 941 PQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
++ VD LL K R E L
Sbjct: 231 SIEAMDFVDRLL--------VKER--KSRMTASEAL 256
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (355), Expect = 5e-37
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 21/219 (9%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIK 765
++ + +IG GSFG VY+ L + G LVA+K + + + E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77
Query: 766 IITICSSIDSHGVD-FKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+ S + + LV +Y+ H+S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TLPVIYVKLYMYQLFRS 134
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ Y+H I H D+KP N+LLD D V + DFG AK L ++
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--------VRGEPNVSYI 183
Query: 884 GTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
+ Y APE G+ + + DV+S G +L E+ + +
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 1e-36
Identities = 56/255 (21%), Positives = 97/255 (38%), Gaps = 36/255 (14%)
Query: 712 IGQGSFGFVYRGIL-------GEGGLLVAVKVLNL-TRKGAFKSFVAECEALRNI-RHRN 762
+G+G+FG V VAVK+L + ++E E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 763 LIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD----------LSLI 812
+I ++ C+ ++ EY G+L E+L LS
Sbjct: 81 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 135
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
+ A +A + + IH DL NVL+ D V + DFGLA+ +
Sbjct: 136 DLVSCAYQVARG---MEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-----HH 187
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932
++ + + V ++APE + DV+SFG+LL E+F G+ +
Sbjct: 188 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS----PYPGVPV 243
Query: 933 HEFAMKALPQRVIEI 947
E ++
Sbjct: 244 EELFKLLKEGHRMDK 258
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 138 bits (349), Expect = 1e-36
Identities = 62/283 (21%), Positives = 105/283 (37%), Gaps = 43/283 (15%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F +G GSFG V+ G A+KVL + R + E L + H
Sbjct: 5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 64
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
+I++ ++ +Y++ G L L S A ++
Sbjct: 65 FIIRMWGTFQDAQQI-----FMIMDYIEGGELFSLLRKS------QRFPNPVAKFYAAEV 113
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
L + II+ DLKP N+LLD + + DFG AK++ P +
Sbjct: 114 C---LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV----------PDVTYT 160
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFNDGLTIHEFA 936
+ GT Y+APE + + D +SFGIL+ EM P T + L
Sbjct: 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 220
Query: 937 MKALPQRVIEIVDPLLLLEVRTNNSKNP---CGDGRGGIEECL 976
+ V +++ L+ +++ G+ + G E+
Sbjct: 221 PPFFNEDVKDLLSRLI--------TRDLSQRLGNLQNGTEDVK 255
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 2e-36
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 30/257 (11%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEAL-RNIRH 760
+F M+G+GSFG V+ + A+K L + + + E L H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 761 RNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID 820
L + + ++ V EY+ G L + + L + A +
Sbjct: 63 PFLTHMFCTFQTKENL-----FFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAE 111
Query: 821 IAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSI 880
I +++LH I++ DLK N+LLD D + DFG+ K + +
Sbjct: 112 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML-------GDAKTN 161
Query: 881 GIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFNDGLTIHEF 935
GT Y+APE +G + + + D +SFG+LL EM I + P + +F+ + F
Sbjct: 162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF 221
Query: 936 AMKALPQRVIEIVDPLL 952
+ L + +++ L
Sbjct: 222 YPRWLEKEAKDLLVKLF 238
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 136 bits (344), Expect = 2e-36
Identities = 64/296 (21%), Positives = 106/296 (35%), Gaps = 57/296 (19%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF---------KSFVAECEALR 756
+ ++G+G V R I AVK++++T G+F ++ + E + LR
Sbjct: 5 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64
Query: 757 NIR-HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
+ H N+I++ + LV++ M+ G L ++L LS +
Sbjct: 65 KVSGHPNIIQLKDTYETNTFF-----FLVFDLMKKGELFDYLTEKVT------LSEKETR 113
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVET 875
I + I LH I+H DLKP N+LLD DM + DFG + L +
Sbjct: 114 KIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQL--------DP 162
Query: 876 PSSSIGIKGTVGYVAPEYGMGSEA------SMAGDVYSFGILLLEMFIRKRPTDS----- 924
+ GT Y+APE S D++S G+++ + P
Sbjct: 163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 222
Query: 925 ----MFNDGLTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
+ + V ++V L P R EE L
Sbjct: 223 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFL--------VVQP--QKRYTAEEAL 268
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 3e-36
Identities = 51/265 (19%), Positives = 95/265 (35%), Gaps = 27/265 (10%)
Query: 705 EFSTSNMIGQGSFGFVYRGIL-----GEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNI 758
+G+G+FG V VAVK+L ++ ++E + L +I
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73
Query: 759 RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCD---------- 808
H + + + + ++ E+ + G+L +L ++
Sbjct: 74 GHHLNVVNLLGACTKPGGPL---MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130
Query: 809 LSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTC 868
L+L + + +A +E+L IH DL N+LL V + DFGLA+ +Y
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY-- 185
Query: 869 QVDDVETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND 928
+ + ++APE ++ DV+SFG+LL E+F
Sbjct: 186 ---KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 242
Query: 929 GLTIHEFAMKALPQRVIEIVDPLLL 953
+ R + P +
Sbjct: 243 DEEFCRRLKEGTRMRAPDYTTPEMY 267
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 4e-36
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 17/221 (7%)
Query: 703 TGEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHR 761
++ + IG+G++G V + VA+K ++ + + + E + L RH
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
N+I I I + + LV M L + L + LS + I
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQH-------LSNDHICYFLYQI 118
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
++Y+H ++H DLKPSN+LL+ + DFGLA+ D +
Sbjct: 119 LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTE 171
Query: 882 IKGTVGYVAPEYGMGSEASM-AGDVYSFGILLLEMFIRKRP 921
T Y APE + S+ + D++S G +L EM +
Sbjct: 172 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 212
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 136 bits (344), Expect = 5e-36
Identities = 53/277 (19%), Positives = 88/277 (31%), Gaps = 39/277 (14%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR-KGAFKSFVAECEALRNIRHRNLIKIIT 768
+++G G+F V LVA+K + +G S E L I+H N++ +
Sbjct: 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 74
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
I S L+ + + G L + + + + + A++YL
Sbjct: 75 IYESGGHL-----YLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYL 123
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H LD D + DFGL+K + S GT GY
Sbjct: 124 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--------DPGSVLSTACGTPGY 175
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSM---------FNDGLTIHEFAMKA 939
VAPE S A D +S G++ + P
Sbjct: 176 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 235
Query: 940 LPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
+ + + L+ K+P + R E+ L
Sbjct: 236 ISDSAKDFIRHLM--------EKDP--EKRFTCEQAL 262
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 2e-35
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 22/288 (7%)
Query: 699 LSKATGEFSTSNMIGQGSFGFVYRGI-LGEGGLLVAVKVLNLT--RKGAFKSFVAECEAL 755
L +A ++ IG+G++G V++ L GG VA+K + + +G S + E L
Sbjct: 2 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 61
Query: 756 RNI---RHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLI 812
R++ H N++++ +C+ + LV+E++ +
Sbjct: 62 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-----VPTE 116
Query: 813 QRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDD 872
+ + +++LH H ++H DLKP N+L+ + DFGLA+
Sbjct: 117 TIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 173
Query: 873 VETPSSSIGIKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTI 932
+ T+ Y APE + S + D++S G + EMF RK +
Sbjct: 174 --------SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 225
Query: 933 HEFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECLVAVI 980
+ LP D L + + S P I+E ++
Sbjct: 226 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL 273
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 4e-35
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLT--RKGAFKSFVAECEALRNIRHR 761
++ IGQG+FG V++ + G VA+K + + ++G + + E + L+ ++H
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69
Query: 762 NLIKIITICSSIDSHGVDFKA---LVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIA 818
N++ +I IC + S K LV+++ ++ + +L + +
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVM 123
Query: 819 IDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSS 878
+ + L++ + I+H D+K +NVL+ D V + DFGLA+ + ++
Sbjct: 124 QML---LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTN 180
Query: 879 SIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
+ T+ Y PE +G D++ G ++ EM+ R
Sbjct: 181 RV---VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPI 221
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 134 bits (338), Expect = 5e-35
Identities = 57/247 (23%), Positives = 95/247 (38%), Gaps = 27/247 (10%)
Query: 708 TSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEAL-RNIRHRNLIKI 766
TS ++G G G V + A+K+L K E E R + ++++I
Sbjct: 16 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRI 70
Query: 767 ITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ + ++ + +V E + G L + DQ + + I I AI+
Sbjct: 71 VDVYENLYAGRKCL-LIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQ 125
Query: 827 YLHHHCQPPIIHGDLKPSNVLLDH---DMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
YLH I H D+KP N+L + + + DFG AK + +S
Sbjct: 126 YLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--------TSHNSLTTPC 174
Query: 884 GTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQR 943
T YVAPE + + D++S G+++ + P S N GL I +
Sbjct: 175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS--NHGLAISPGMKTRIRMG 232
Query: 944 VIEIVDP 950
E +P
Sbjct: 233 QYEFPNP 239
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 131 bits (330), Expect = 3e-34
Identities = 42/222 (18%), Positives = 74/222 (33%), Gaps = 20/222 (9%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
IG+GSFG ++ G VA+K R+ E + + I +
Sbjct: 13 IGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG 70
Query: 772 SIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHHH 831
H V LV + + G E L + S+ A + ++ +H
Sbjct: 71 QEGLHNV----LVIDLL--GPSLEDLLDLCGRK----FSVKTVAMAAKQMLARVQSIHEK 120
Query: 832 CQPPIIHGDLKPSNVLLDHDMVAHVG-----DFGLAKFLYTCQVDDVETPSSSIGIKGTV 886
+++ D+KP N L+ + DFG+ KF + GT
Sbjct: 121 S---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177
Query: 887 GYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFND 928
Y++ +G E S D+ + G + + P +
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (329), Expect = 3e-34
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNL-----TRKGAFKSFVAECEALRNIRHRNLI 764
+ +G+G F VY+ +VA+K + L + G ++ + E + L+ + H N+I
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
++ + +LV+++M+ +S +
Sbjct: 64 GLLDAFGHKSNI-----SLVFDFMETDLEVIIKDNSLVLTPS------HIKAYMLMTLQG 112
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+EYLH H I+H DLKP+N+LLD + V + DFGLAK +
Sbjct: 113 LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-------SPNRAYTHQVV 162
Query: 885 TVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
T Y APE G+ + D+++ G +L E+ +R
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF 200
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 3e-33
Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 40/283 (14%)
Query: 705 EFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHR 761
+F ++G+G+FG V G A+K+L + K V E L+N RH
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 762 NLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDI 821
L + + D V EY G L L + + +I
Sbjct: 66 FLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRE------RVFTEERARFYGAEI 114
Query: 822 AYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIG 881
L + +++ D+K N++LD D + DFGL K + ++
Sbjct: 115 V---SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-------ATMKT 164
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-----TDSMFNDGLTIHEFA 936
GT Y+APE ++ A D + G+++ EM + P + +F L
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 937 MKALPQRVIEIVDPLLLLEVRTNNSKNP---CGDGRGGIEECL 976
+ L ++ LL K+P G G +E +
Sbjct: 225 PRTLSPEAKSLLAGLL--------KKDPKQRLGGGPSDAKEVM 259
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 128 bits (323), Expect = 6e-33
Identities = 59/269 (21%), Positives = 96/269 (35%), Gaps = 29/269 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN---LTRKGAFKSFVAECEALRNIRHRNLIKIIT 768
+G GSFG V E G A+K+L+ + + + + E L+ + L+K+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 769 ICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+V EY+ G + L S A I EYL
Sbjct: 109 SF-----KDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARFYAAQIVLTFEYL 157
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H +I+ DLKP N+L+D V DFG AK + + GT
Sbjct: 158 HSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT----------LCGTPEA 204
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP-TDSMFNDGLTIHEFAMKALPQRVIEI 947
+APE + + A D ++ G+L+ EM P P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
Query: 948 VDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
+ LL ++ + +K G+ + G+ +
Sbjct: 265 LKDLLRNLLQVDLTKRF-GNLKNGVNDIK 292
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (316), Expect = 1e-32
Identities = 45/220 (20%), Positives = 82/220 (37%), Gaps = 32/220 (14%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR------KGAFKSFVAECEALRNIRHRNLIK 765
+G G F V + GL A K + R + + E L+ I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 766 IITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAI 825
+ + + L+ E + G L ++L + ++++ +
Sbjct: 78 LHEVYENKTDV-----ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---------L 123
Query: 826 EYLHHHCQPPIIHGDLKPSNVLLDHDMVA----HVGDFGLAKFLYTCQVDDVETPSSSIG 881
+++ I H DLKP N++L V + DFGLA + + +
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--------DFGNEFKN 175
Query: 882 IKGTVGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
I GT +VAPE + D++S G++ + P
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 8e-32
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 706 FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNL 763
F IG+G++G VY+ G +VA+K + L +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 764 IKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAY 823
+K++ + + + LV+E++ + L D + + L +
Sbjct: 64 VKLLDVIHTENKL-----YLVFEFL-----HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 824 AIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIK 883
+ + H H ++H DLKP N+L++ + + DFGLA+ V T + +
Sbjct: 114 GLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV----PVRTYTHEVVT- 165
Query: 884 GTVGYVAPE-YGMGSEASMAGDVYSFGILLLEMFIRKRP 921
+ Y APE S A D++S G + EM R+
Sbjct: 166 --LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (308), Expect = 2e-31
Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 22/212 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKIITI 769
IG+G++G V++ E +VA+K + L +G S + E L+ ++H+N++++ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 770 CSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLH 829
S LV+E+ + + + D S + +L ++ L
Sbjct: 70 LHSDKKLT-----LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL---------LKGLG 115
Query: 830 HHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
++H DLKP N+L++ + + +FGLA+ + S +
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF------GIPVRCYSAEVVTLWYRP 169
Query: 890 APEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
S + D++S G + E+ RP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 3e-31
Identities = 52/283 (18%), Positives = 91/283 (32%), Gaps = 43/283 (15%)
Query: 704 GEFSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAF------KSFVAECEALRN 757
++ ++G G FG VY GI L VA+K + R + E L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 758 IR--HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRL 815
+ +I+++ DS L+ E + L
Sbjct: 64 VSSGFSGVIRLLDWFERPDSF-----VLILERPEPVQDLFDFITERGA-----LQEELAR 113
Query: 816 HIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVE 874
+ A+ + H+ ++H D+K N+L+D + + DFG L
Sbjct: 114 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL--------- 161
Query: 875 TPSSSIGIKGTVGYVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIH 933
+ GT Y PE+ + V+S GILL +M P + + +
Sbjct: 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-EEIIRGQ 220
Query: 934 EFAMKALPQRVIEIVDPLLLLEVRTNNSKNPCGDGRGGIEECL 976
F + + ++ L + P R EE
Sbjct: 221 VFFRQRVSSECQHLIRWCL--------ALRP--SDRPTFEEIQ 253
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 121 bits (304), Expect = 1e-30
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIR-HRNLIKIITIC 770
+G+G + V+ I V VK+L +K K E + L N+R N+I + I
Sbjct: 43 LGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPNIITLADIV 99
Query: 771 SSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYLHH 830
S ALV+E++ N ++ L+ +I A++Y H
Sbjct: 100 KDPVSRTP---ALVFEHVNNTDFKQLYQT---------LTDYDIRFYMYEILKALDYCHS 147
Query: 831 HCQPPIIHGDLKPSNVLLDHD-MVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGYV 889
I+H D+KP NV++DH+ + D+GLA+F + Q +V + +
Sbjct: 148 MG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--------ASRYFK 196
Query: 890 APEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
PE + + + D++S G +L M RK P
Sbjct: 197 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 7e-30
Identities = 60/275 (21%), Positives = 100/275 (36%), Gaps = 31/275 (11%)
Query: 698 ELSKATGEFSTS----NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAE 751
E++K E +G G++G V + G G VA+K L + K E
Sbjct: 8 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE 67
Query: 752 CEALRNIRHRNLIKIITICSSIDS-HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLS 810
L+++RH N+I ++ + + ++ LV +M + H L
Sbjct: 68 LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--------LG 119
Query: 811 LIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQV 870
+ + + + Y+H H DLKP N+ ++ D + DFGLA+ +
Sbjct: 120 EDRIQFLVYQMLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFGLARQADSEMT 176
Query: 871 DDVETPSSSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFIRKRPTDSMFNDG 929
V T Y APE + + D++S G ++ EM K +D
Sbjct: 177 GYVVTR----------WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF--KGSDH 224
Query: 930 LTIHEFAMKALPQRVIEIVDPLLLLEVRTNNSKNP 964
L + MK E V L E + P
Sbjct: 225 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP 259
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 118 bits (296), Expect = 8e-30
Identities = 76/324 (23%), Positives = 129/324 (39%), Gaps = 22/324 (6%)
Query: 32 NETDRLALLAIKSQLHDPLGVTSSWNNSINLCQ--WTGVTC--GHRHQRVTKLYLRNQSI 87
N D+ ALL IK L +P SSW + + C W GV C + RV L L ++
Sbjct: 4 NPQDKQALLQIKKDLGNP-TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 88 GGI--LSPHVGNLSFLRLIDLADN-NFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLS 144
+ + NL +L + + N G IP + +L++L L + + + SG IP LS
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 145 GCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKV-INV 203
L+ N L G + +I + L ++ N ++G +P S G+ S L + +
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSI-SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 204 EENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPID 263
NRL+G+IP T L +F + ++ ++ + + +
Sbjct: 182 SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
Query: 264 IGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLL 323
+ L + N G +P + L L+++ N G++P LQ
Sbjct: 242 LS---KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSA 297
Query: 324 LAGNNLGNGAANDLDFITPLTNCS 347
A N G+ PL C+
Sbjct: 298 YANNKCLCGS--------PLPACT 313
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 91.0 bits (224), Expect = 2e-20
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 9/266 (3%)
Query: 375 VQINMGRNQISG--TIPSGIGNLVNLNGFGI-DLNQLTGTIPHEIGKLTNLQLLYLDFNL 431
+++ + IPS + NL LN I +N L G IP I KLT L LY+
Sbjct: 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTN 112
Query: 432 LEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNI 491
+ G+IP L + L L+ N L G +P S+ + +L+ + N+++GA+P +
Sbjct: 113 VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSF 172
Query: 492 TTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYN 551
+ L + +S N L +P NL S + + +
Sbjct: 173 SKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232
Query: 552 SFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVF 611
+ LS + DL +N + G +P+ L L FL LN+S N+ G++P G
Sbjct: 233 LAFDLGKVGLSKNLNGL--DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNL 290
Query: 612 SNKTRISLSGNGKLCGGLYELQLPSC 637
+ + N LCG LP+C
Sbjct: 291 QRFDVSAYANNKCLCGS----PLPAC 312
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 116 bits (291), Expect = 2e-29
Identities = 45/215 (20%), Positives = 86/215 (40%), Gaps = 25/215 (11%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLTR--KGAFKSFVAECEALRNIRHRNLIKII 767
IG+G++G VY+ G A+K + L + +G + + E L+ ++H N++K+
Sbjct: 8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 768 TICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEY 827
+ + LV+E++ + L + + +
Sbjct: 67 DVIHTKKRL-----VLVFEHLDQDLKKLLDVCEGG------LESVTAKSFLLQLL---NG 112
Query: 828 LHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVG 887
+ + ++H DLKP N+L++ + + DFGLA+ T+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG-------IPVRKYTHEIVTLW 165
Query: 888 YVAPEYGMGSEA-SMAGDVYSFGILLLEMFIRKRP 921
Y AP+ MGS+ S D++S G + EM
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (295), Expect = 2e-29
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 27/237 (11%)
Query: 692 PIVSYAELSKATGE----FSTSNMIGQGSFGFVYRGILGEGGLLVAVKVLNLTRK--GAF 745
P EL+K E + + +G G++G V + GL VAVK L+ +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 746 KSFVAECEALRNIRHRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHD 805
K E L++++H N+I ++ + + S + ++ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---- 117
Query: 806 VCDLSLIQRLHIAIDIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
L+ + I ++Y+H H DLKPSN+ ++ D + DFGLA+
Sbjct: 118 ---LTDDHVQFLIYQILRGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 866 YTCQVDDVETPSSSIGIKGTVGYVAPEYGMGSE-ASMAGDVYSFGILLLEMFIRKRP 921
V T Y APE + + D++S G ++ E+ +
Sbjct: 172 DDEMTGYVATR----------WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 2e-28
Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 23/213 (10%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLN--LTRKGAFKSFVAECEALRNIRHRNLIKIITI 769
IG G+ G V VA+K L+ + K E ++ + H+N+I ++ +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 770 CSSIDS-HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIEYL 828
+ + LV E M + + + + ++ + I++L
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---------RMSYLLYQMLCGIKHL 135
Query: 829 HHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGTVGY 888
H IH DLKPSN+++ D + DFGLA+ T + T Y
Sbjct: 136 HSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--------VTRYY 184
Query: 889 VAPEYGMGSEASMAGDVYSFGILLLEMFIRKRP 921
APE +G D++S G ++ EM K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 115 bits (288), Expect = 3e-28
Identities = 53/264 (20%), Positives = 100/264 (37%), Gaps = 14/264 (5%)
Query: 712 IGQGSFGFVYRGILGEGGLLVAVKVLNLTRKGAFKSFVAECEALRNIRHRNLIKIITICS 771
+G G F V+ VA+K++ K ++ E + L+ + + K ++ +
Sbjct: 21 LGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 79
Query: 772 S-----IDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYAIE 826
+ +D V+ M L E L +++ + LI I+ + ++
Sbjct: 80 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 139
Query: 827 YLHHHCQPPIIHGDLKPSNVLLD-HDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKGT 885
Y+H C IIH D+KP NVL++ D ++ +A C D+ T
Sbjct: 140 YMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYTNSIQT 192
Query: 886 VGYVAPEYGMGSEASMAGDVYSFGILLLEMFIRKRPTDSMFNDGLTIHEFAMKALPQRVI 945
Y +PE +G+ D++S L+ E+ + T + + + + +
Sbjct: 193 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 252
Query: 946 EIVDPLLLLEVRTNNSKNPCGDGR 969
E+ LL T N G R
Sbjct: 253 ELPSYLLRNGKYTRTFFNSRGLLR 276
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (282), Expect = 8e-28
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 712 IGQGSFGFVYRGILGEG---GLLVAVKVLN----LTRKGAFKSFVAECEALRNIRHRNLI 764
+G G++G V+ G G L A+KVL + + + E + L +IR +
Sbjct: 32 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 91
Query: 765 KIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAIDIAYA 824
+ ++ L+ +Y+ G L L + I +
Sbjct: 92 VTLHYAFQTETK----LHLILDYINGGELFTHLSQRE---------RFTEHEVQIYVGEI 138
Query: 825 IEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFLYTCQVDDVETPSSSIGIKG 884
+ L H + II+ D+K N+LLD + + DFGL+K + + + G
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER------AYDFCG 192
Query: 885 TVGYVAPEYGMGSEA--SMAGDVYSFGILLLEMFIRKRP 921
T+ Y+AP+ G ++ A D +S G+L+ E+ P
Sbjct: 193 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 231
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 105 bits (261), Expect = 1e-24
Identities = 77/370 (20%), Positives = 133/370 (35%), Gaps = 30/370 (8%)
Query: 237 PPSIYNLSSLELLYLRGNRLIGSLPIDIGLT-LPKLTNFVIAENNFSGPIPNSFSNTSNL 295
S +L + L I S+ G+ L LT + N + P N + L
Sbjct: 37 TVSQTDLDQVTTLQADRLG-IKSID---GVEYLNNLTQINFSNNQLTDITP--LKNLTKL 90
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
V + +N N + P+ L + N + + + + +
Sbjct: 91 VDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISAL 150
Query: 356 GNRFGGVLPHSIAN------LSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLT 409
L+ T + + + S + L NL NQ++
Sbjct: 151 SGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS 210
Query: 410 GTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRS 469
P I TNL L L+ N L+ +L +LT LT+L+L +N + P L
Sbjct: 211 DITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTK 264
Query: 470 LLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQV 529
L L + N+++ I + L+ +L N + NL+NL L + N +
Sbjct: 265 LTELKLGANQISN-----ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNI 319
Query: 530 SGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLS 589
S P +S+ T L+ L + N SL++L ++ L N +S P L NL+
Sbjct: 320 SDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLT 373
Query: 590 FLEYLNISSN 599
+ L ++
Sbjct: 374 RITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 98.9 bits (245), Expect = 2e-22
Identities = 77/385 (20%), Positives = 138/385 (35%), Gaps = 24/385 (6%)
Query: 194 NLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRG 253
L+ + + ++ + + L L + L++L +
Sbjct: 20 ALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSN 75
Query: 254 NRLIGSLPIDIGLTLPKLTN---FVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP 310
N+L P+ L + + + + N + D++ +
Sbjct: 76 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 135
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
+S + + + +T L + L L V S+
Sbjct: 136 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 195
Query: 371 STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
T + NQIS P GI NL+ ++ NQL + LTNL L L N
Sbjct: 196 LTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDLANN 251
Query: 431 LLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFN 490
+ P S LT LTEL+L +N + P L +L +L +++N+L P
Sbjct: 252 QISNLAPLS--GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLK 307
Query: 491 ITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSY 550
T YL L N ++D P+ +L L L + N+VS ++L+ T++ +L+ +
Sbjct: 308 NLT---YLTLYFNNISDISPV--SSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGH 360
Query: 551 NSFRGGIPLSLSSLKSVKVLDLSSN 575
N P L++L + L L+
Sbjct: 361 NQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 84.3 bits (207), Expect = 8e-18
Identities = 77/387 (19%), Positives = 142/387 (36%), Gaps = 29/387 (7%)
Query: 242 NLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLN 301
L+ L + ++ L ++T + +NL ++ +
Sbjct: 20 ALAEKMKTVLGKTNVTDTVSQT---DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFS 74
Query: 302 LNLFSGKVPI-NFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFG 360
N + P+ N ++L ++ ++ A L N L
Sbjct: 75 NNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 134
Query: 361 GVLPHSIANLST-----TTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHE 415
L S +S + T + NL L I N+ +
Sbjct: 135 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK--VSDISV 192
Query: 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV 475
+ KLTNL+ L N + P LT L EL L N L+ +L + +L L++
Sbjct: 193 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKD--IGTLASLTNLTDLDL 248
Query: 476 SQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPA 535
+ N+++ P + +T L+ L L N +++ PL L L L+++ NQ+ P
Sbjct: 249 ANNQISNLAP--LSGLTKLT-ELKLGANQISNISPLA--GLTALTNLELNENQLEDISPI 303
Query: 536 TLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLN 595
+ +L YL L +N+ P+S SL ++ L ++N +S L NL+ + +L+
Sbjct: 304 S--NLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKVSD--VSSLANLTNINWLS 357
Query: 596 ISSNHFEGKVPTKGVFSNKTRISLSGN 622
N P + T++ L+
Sbjct: 358 AGHNQISDLTPLAN-LTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 83.1 bits (204), Expect = 2e-17
Identities = 79/380 (20%), Positives = 132/380 (34%), Gaps = 40/380 (10%)
Query: 75 QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNS 134
+VT L I I V L+ L I+ ++N P + L++L +++ NN
Sbjct: 44 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 99
Query: 135 FSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGN 194
+ P + + + + N + L +I+D L
Sbjct: 100 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLT----- 154
Query: 195 LSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGN 254
+ L L L+I+ N+ + + L++LE L N
Sbjct: 155 -----SLQQLSFGNQVTDLKPLANLTTLERLDISSNKV--SDISVLAKLTNLESLIATNN 207
Query: 255 RLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFS 314
++ P+ I L + N + ++ +NL LDL N S S
Sbjct: 208 QISDITPLGIL---TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN--LAPLS 260
Query: 315 RLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTT 374
L L+ L L N + N I+PL + L L L N+ + P S T
Sbjct: 261 GLTKLTELKLGANQISN--------ISPLAGLTALTNLELNENQLEDISPISNLKNLTY- 311
Query: 375 VQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEG 434
+ + N IS P + +L L N+++ + LTN+ L N +
Sbjct: 312 --LTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISD 365
Query: 435 SIPFSLGNLTLLTELELQSN 454
P L NLT +T+L L
Sbjct: 366 LTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 71.2 bits (173), Expect = 1e-13
Identities = 71/373 (19%), Positives = 130/373 (34%), Gaps = 56/373 (15%)
Query: 284 PIPNSF--SNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFIT 341
PI F + + + L + V + L ++ L + + I
Sbjct: 11 PINQIFTDTALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRLGIKS--------ID 60
Query: 342 PLTNCSKLIALGLYGNRFGGVLP-HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNG 400
+ + L + N+ + P ++ L + N + + + L N
Sbjct: 61 GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNN 120
Query: 401 FGIDLNQLTGTIPHEIGKLTNLQLLYL-----------DFNLLEGSIPFSLGNLTLLTEL 449
D++ L +L++ + + + + L NLT L L
Sbjct: 121 QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERL 180
Query: 450 ELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSL 509
++ SN + + +L SL + N+++ P I L L+ N L D
Sbjct: 181 DISSNKVSDISVLA--KLTNLESLIATNNQISDITPLGILTNLD---ELSLNGNQLKD-- 233
Query: 510 PLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSS------ 563
+ +L NL +LD++ NQ+S P LS T L L L N PL+ +
Sbjct: 234 IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLE 291
Query: 564 --------------LKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEGKVPTKG 609
LK++ L L NN+S P + +L+ L+ L ++N V +
Sbjct: 292 LNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD-VSSLA 348
Query: 610 VFSNKTRISLSGN 622
+N +S N
Sbjct: 349 NLTNINWLSAGHN 361
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 89.3 bits (220), Expect = 7e-20
Identities = 52/262 (19%), Positives = 109/262 (41%), Gaps = 13/262 (4%)
Query: 368 ANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYL 427
+L T +++ N+I+ NL NL+ + N+++ P L L+ LYL
Sbjct: 27 KDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 86
Query: 428 DFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQ 487
N L+ L L E + ++ ++ + L N ++ L + K +G
Sbjct: 87 SKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGL-NQMIVVELGTNPLKSSGIENGA 145
Query: 488 IFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLN 547
+ LS +++ + + G +L EL + N+++ A+L +L L
Sbjct: 146 FQGMKKLSYI-RIADTNITT---IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLG 201
Query: 548 LSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFEG---- 603
LS+NS SL++ ++ L L++N L ++P L + +++ + + +N+
Sbjct: 202 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSN 260
Query: 604 ---KVPTKGVFSNKTRISLSGN 622
++ + +SL N
Sbjct: 261 DFCPPGYNTKKASYSGVSLFSN 282
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 87.8 bits (216), Expect = 2e-19
Identities = 47/282 (16%), Positives = 86/282 (30%), Gaps = 22/282 (7%)
Query: 63 CQWTGVTCGHRH---------QRVTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYG 113
C V C L L+N I I NL L + L +N
Sbjct: 10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69
Query: 114 NIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMR 173
P L +L+ L L+ N L + + + N M
Sbjct: 70 ISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGL--NQMI 127
Query: 174 LEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFS 233
+ +L +G + + L I + + ++ L L++ GN+ +
Sbjct: 128 VVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT---ELHLDGNKIT 184
Query: 234 GNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTS 293
S+ L++L L L N + P L + N +P ++
Sbjct: 185 KVDAASLKGLNNLAKLGLSFNSISAV-DNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 242
Query: 294 NLVMLDLNLNLFSG------KVPINFSRLQNLSWLLLAGNNL 329
+ ++ L+ N S P ++ + S + L N +
Sbjct: 243 YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 83.9 bits (206), Expect = 5e-18
Identities = 42/216 (19%), Positives = 74/216 (34%), Gaps = 7/216 (3%)
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSL 470
+P ++ + LL L N + NL L L L +N + P + L
Sbjct: 24 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
L +S+N+L LP+++ + + S+ N +VEL + + S
Sbjct: 82 ERLYLSKNQLKE-LPEKMPKTLQELRVHENEITKVRKSV-FNGLNQMIVVELGTNPLKSS 139
Query: 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSF 590
G L Y+ ++ + + S+ L L N ++ L+ L+
Sbjct: 140 GIENGAFQGMKKLSYIRIADTNIT---TIPQGLPPSLTELHLDGNKITKVDAASLKGLNN 196
Query: 591 LEYLNISSNHFEGKVPTKGVFSNKTRISLSGNGKLC 626
L L +S N + R N KL
Sbjct: 197 LAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 232
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 77.4 bits (189), Expect = 7e-16
Identities = 52/325 (16%), Positives = 95/325 (29%), Gaps = 58/325 (17%)
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINF 313
+ + +P D+ P + N + F N NL L L N S P F
Sbjct: 19 DLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 75
Query: 314 SRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTT 373
+ L L L L+ N L LP +
Sbjct: 76 APLVKLERLYLSKNQLKE-------------------------------LPEKMPKTLQE 104
Query: 374 TVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE 433
++ ++ +G+ ++ + L +G + L + + +
Sbjct: 105 LRVHENEITKVRKSVFNGLNQMIVVELGTNPLK-SSGIENGAFQGMKKLSYIRIADTNIT 163
Query: 434 GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITT 493
G LTEL L N + +SL +L L +S N ++ + N
Sbjct: 164 ---TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 220
Query: 494 LSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSF 553
L +N + P + + + + + + N +S + N F
Sbjct: 221 LRELHLNNNKLVKV--PGGLADHKYIQVVYLHNNNIS----------------AIGSNDF 262
Query: 554 RGGIPLSLSSLKSVKVLDLSSNNLS 578
P + S + L SN +
Sbjct: 263 CP--PGYNTKKASYSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 73.9 bits (180), Expect = 1e-14
Identities = 62/321 (19%), Positives = 100/321 (31%), Gaps = 48/321 (14%)
Query: 236 VPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL 295
VP + LL L+ N++ D L L ++ N S P +F+ L
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFK-NLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 296 VMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLY 355
L L+ N LQ L + N L+ + + +
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTN------- 134
Query: 356 GNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHE 415
+ SG + L+ I +T TIP
Sbjct: 135 -------------------------PLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQG 168
Query: 416 IGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNV 475
+ +L L+LD N + SL L L +L L N + SL N L L++
Sbjct: 169 L--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 226
Query: 476 SQNKLTGALPKQIFNITTLSLYLDLSNNFLND------SLPLEVGNLQNLVELDISRNQV 529
+ NKL P + + + + L NN ++ P + + + N V
Sbjct: 227 NNNKLVKV-PGGLADHKYIQ-VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
Query: 530 S-GEI-PATLSACTSLEYLNL 548
EI P+T + L
Sbjct: 285 QYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 53.9 bits (128), Expect = 3e-08
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 29/177 (16%)
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQ 528
L + S L +PK + T LDL NN + + + NL+NL L + N+
Sbjct: 11 HLRVVQCSDLGLE-KVPKDLPPDTA---LLDLQNNKITEIKDGDFKNLKNLHTLILINNK 66
Query: 529 VSGEIPATLSACTSLEYLNLSYNSFRGGIP---------------------LSLSSLKSV 567
+S P + LE L LS N + + L +
Sbjct: 67 ISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQM 126
Query: 568 KVLDLSSNNL--SGQIPKYLENLSFLEYLNISSNHFEGKVPTKGVFSNKTRISLSGN 622
V++L +N L SG + + L Y+ I+ + +G+ + T + L GN
Sbjct: 127 IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT--TIPQGLPPSLTELHLDGN 181
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 86.0 bits (212), Expect = 1e-19
Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 29/166 (17%)
Query: 710 NMIGQGSFGFVYRGILGEGGLLVAVKVLNLT----------RKGAFKSFVAECEALRNIR 759
++G+G V+ + G VK + R F
Sbjct: 6 KLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64
Query: 760 HRNLIKIITICSSIDSHGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAI 819
R L K+ + + + A++ E + L + D+ +
Sbjct: 65 FRALQKLQGLAV-PKVYAWEGNAVLMELIDAKELYRVRVENPDE-------------VLD 110
Query: 820 DIAYAIEYLHHHCQPPIIHGDLKPSNVLLDHDMVAHVGDFGLAKFL 865
I + +H I+HGDL NVL+ + + DF + +
Sbjct: 111 MILEEVAKFYHRG---IVHGDLSQYNVLV-SEEGIWIIDFPQSVEV 152
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.3 bits (217), Expect = 1e-19
Identities = 51/252 (20%), Positives = 88/252 (34%), Gaps = 5/252 (1%)
Query: 352 LGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGT 411
+ L+GNR V S T+ + G + D QL
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 412 IPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLL 471
P L L L+LD L+ P L L L LQ N LQ + + +L
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLT 156
Query: 472 SLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSG 531
L + N+++ + + +L L N + P +L L+ L + N +S
Sbjct: 157 HLFLHGNRISSVPERAFRGLHSLDRL-LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Query: 532 EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFL 591
L+ +L+YL L+ N + ++ SS+ + +P+ L
Sbjct: 216 LPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAGRDL- 273
Query: 592 EYLNISSNHFEG 603
+++N +G
Sbjct: 274 --KRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.8 bits (169), Expect = 2e-13
Identities = 40/256 (15%), Positives = 72/256 (28%), Gaps = 31/256 (12%)
Query: 77 VTKLYLRNQSIGGILSPHVGNLSFLRLIDLADNNFYGNI--------------------- 115
+++L I + + L ++ L N
Sbjct: 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93
Query: 116 ----PHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNW 171
P L RL TL L P G + L N L + + +
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDL 152
Query: 172 MRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQ 231
L L + N ++ + L L + + +NR++ P+ L L + N
Sbjct: 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212
Query: 232 FSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSN 291
S ++ L +L+ L L N + L F + + +P +
Sbjct: 213 LSALPTEALAPLRALQYLRLNDNPWVCD--CRARPLWAWLQKFRGSSSEVPCSLPQRLAG 270
Query: 292 TSNLVMLDLNLNLFSG 307
+ L N G
Sbjct: 271 RD---LKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (162), Expect = 1e-12
Identities = 44/217 (20%), Positives = 71/217 (32%), Gaps = 3/217 (1%)
Query: 411 TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSL 470
+P I Q ++L N + S LT L L SN L ++ L
Sbjct: 25 AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 471 LSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
L++S N ++ F+ L L L + P L L L + N +
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 531 GEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSF 590
T +L +L L N + L S+ L L N ++ P +L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 591 LEYLNISSNHFEGK-VPTKGVFSNKTRISLSGNGKLC 626
L L + +N+ + L+ N +C
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (151), Expect = 3e-11
Identities = 43/303 (14%), Positives = 81/303 (26%), Gaps = 40/303 (13%)
Query: 254 NRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNL-VMLDLNLNLFSGKVPIN 312
+ + ++P+ I + N S SF NL ++ + L
Sbjct: 20 QQGLQAVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF 76
Query: 313 FSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLST 372
L L + + L L +
Sbjct: 77 TGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH-------LDRCGLQELGPGLFRGLA 129
Query: 373 TTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLL 432
+ + N + +L NL + N+++ L +L L L N +
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 433 EGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNIT 492
P + +L L L L +N L +L R+L L ++ N +
Sbjct: 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL--- 246
Query: 493 TLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNS 552
L + S ++V +P L+ + L+ N
Sbjct: 247 -----------------------WAWLQKFRGSSSEVPCSLPQRLA---GRDLKRLAAND 280
Query: 553 FRG 555
+G
Sbjct: 281 LQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.4 bits (147), Expect = 1e-10
Identities = 45/229 (19%), Positives = 75/229 (32%), Gaps = 2/229 (0%)
Query: 101 LRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLV 160
+ I L N L L L +N + +G + L N +
Sbjct: 34 SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93
Query: 161 GQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLR 220
+ + RL L + L P L+ L+ + +++N L +T L
Sbjct: 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG 153
Query: 221 NSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENN 280
N +L + GN+ S + L SL+ L L NR+ P L +L + NN
Sbjct: 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP-HAFRDLGRLMTLYLFANN 212
Query: 281 FSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNL 329
S + + L L LN N + L + + +
Sbjct: 213 LSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEV 260
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.7 bits (143), Expect = 3e-10
Identities = 49/249 (19%), Positives = 80/249 (32%), Gaps = 31/249 (12%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSN----------- 454
LT +P ++ K + +L+L NLL +L T LT+L L
Sbjct: 20 RNLT-ALPPDLPK--DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTL 76
Query: 455 ---------YLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFL 505
+ Q LG L++ +LP L L N L
Sbjct: 77 PVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
Query: 506 NDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLK 565
P + L +L ++ N ++ L+ +L+ L L NS IP
Sbjct: 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSH 195
Query: 566 SVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNH---FEGKVPTKGVFSNKTRISLSGN 622
+ L N E L F +L ++ + ++ V K + SN + +
Sbjct: 196 LLPFAFLHGNPWLCN----CEILYFRRWLQDNAENVYVWKQGVDVKAMTSNVASVQCDNS 251
Query: 623 GKLCGGLYE 631
K Y
Sbjct: 252 DKFPVYKYP 260
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 2e-09
Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 15/219 (6%)
Query: 239 SIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVML 298
+ ++S + L +LP D+ T ++EN + + L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 299 DLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNR 358
+L+ + L + + N L + L + +
Sbjct: 61 NLD----------RAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFN 110
Query: 359 FGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGK 418
LP ++ + N++ P + L + N LT +
Sbjct: 111 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 170
Query: 419 LTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ 457
L NL L L N L +IP LL L N
Sbjct: 171 LENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.0 bits (123), Expect = 1e-07
Identities = 50/212 (23%), Positives = 77/212 (36%), Gaps = 7/212 (3%)
Query: 415 EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLN 474
E+ K+ + + D L ++P L T L L N L ++L L LN
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 475 VSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIP 534
+ + +LT L ++ SLPL L L LD+S N+++
Sbjct: 62 LDRAELTKLQVDGTLP----VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 535 ATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYL 594
L L+ L L N + P L+ ++ L L++NNL+ L L L+ L
Sbjct: 118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177
Query: 595 NISSNHFEGKVPTKGVFSNKTRISLSGNGKLC 626
+ N L GN LC
Sbjct: 178 LLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.3 bits (116), Expect = 9e-07
Identities = 29/177 (16%), Positives = 50/177 (28%), Gaps = 21/177 (11%)
Query: 101 LRLIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIP----TNLSGCSNLINFLAHG 156
++ L++N Y + +RL L L + L N L
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSL 92
Query: 157 NNLVGQIAANIGYNWMRLEKLSI----------------ADNHLTGQLPASIGNLSVLKV 200
L + A + S+ N L P + L+
Sbjct: 93 PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152
Query: 201 INVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLI 257
+++ N L+ L L N L + N +P + L +L GN +
Sbjct: 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.1 bits (92), Expect = 8e-04
Identities = 34/240 (14%), Positives = 68/240 (28%), Gaps = 39/240 (16%)
Query: 191 SIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLY 250
+ ++ +N ++ L+ +P L +++ L+++ N ++ + L L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 251 LRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVP 310
L L + + TLP L ++ N + + V+ L S +
Sbjct: 62 LDRAELT---KLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 311 INFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANL 370
+ N K + GL
Sbjct: 119 ALRGLGELQEL-------------------YLKGNELKTLPPGLLTPTPKLEKLS----- 154
Query: 371 STTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFN 430
+ N ++ + L NL+ + N L TIP L +L N
Sbjct: 155 --------LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (136), Expect = 6e-09
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 10/94 (10%)
Query: 518 NLVELDISRNQVSGE-IPATLSACTSLEYLNLSYNSFRG----GIPLSLSSLKSVKVLDL 572
++ LDI ++S L + + L I +L ++ L+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 573 SSNNLSGQIPKYL-----ENLSFLEYLNISSNHF 601
SN L + ++ L++ +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (130), Expect = 3e-08
Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%)
Query: 493 TLSL-YLDLSNNFLNDSLPLEV-GNLQNLVELDISRNQVSGE----IPATLSACTSLEYL 546
+L + LD+ L+D+ E+ LQ + + ++ I + L +L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 547 NLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKY 584
NL N + + +L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTG 98
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.6 bits (129), Expect = 4e-08
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 515 NLQNLVELDISRNQVSGE----IPATLSACTSLEYLNLSYNSFRGGIPLSLSS-----LK 565
L L ++ VS + ATL A SL L+LS N L L
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 566 SVKVLDLSSNNLSGQIPKYLENL 588
++ L L S ++ L+ L
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (119), Expect = 5e-07
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Query: 542 SLEYLNLSYNSFR-GGIPLSLSSLKSVKVLDLSSNNLSGQ----IPKYLENLSFLEYLNI 596
++ L++ L L+ +V+ L L+ I L L LN+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 597 SSNHFEGK 604
SN
Sbjct: 63 RSNELGDV 70
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.7 bits (119), Expect = 6e-07
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 9/82 (10%)
Query: 534 PATLSACTSLEYLNLSYNSFRG----GIPLSLSSLKSVKVLDLSSNNLSGQIPKYL---- 585
+ L L L+ + +L + S++ LDLS+N L L
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 586 -ENLSFLEYLNISSNHFEGKVP 606
+ LE L + ++ ++
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEME 443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.6 bits (116), Expect = 1e-06
Identities = 12/92 (13%), Positives = 34/92 (36%), Gaps = 9/92 (9%)
Query: 469 SLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLND----SLPLEVGNLQNLVELDI 524
+ SL++ +L+ A ++ + + L + L + + + L EL++
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 525 SRNQVSGEIPATL-----SACTSLEYLNLSYN 551
N++ + + ++ L+L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (112), Expect = 4e-06
Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 9/81 (11%)
Query: 497 YLDLSNNFLND----SLPLEVGNLQNLVELDISRNQVSGEIPATLSA-----CTSLEYLN 547
L L++ ++D SL + +L ELD+S N + L LE L
Sbjct: 373 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLV 432
Query: 548 LSYNSFRGGIPLSLSSLKSVK 568
L + + L +L+ K
Sbjct: 433 LYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 3e-05
Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 442 NLTLLTELELQSNYLQGN----IPSSLGNCRSLLSLNVSQNKLTG----ALPKQIFNITT 493
++L L L + + + ++L SL L++S N L L + +
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 494 LSLYLDLSNNFLNDSLPLEVGNL-QNLVELDI 524
L L L + + ++ + + L ++ L +
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEKDKPSLRV 458
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (103), Expect = 5e-05
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 9/93 (9%)
Query: 421 NLQLLYLDFN-LLEGSIPFSLGNLTLLTELELQSNYLQG----NIPSSLGNCRSLLSLNV 475
++Q L + L + L L + L L +I S+L +L LN+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 476 SQNKLTG----ALPKQIFNITTLSLYLDLSNNF 504
N+L + + + + L L N
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 2e-04
Identities = 16/80 (20%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Query: 292 TSNLVMLDLNLNLFSGK-VPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLI 350
+ ++ LD+ S LQ + L L D+ + L L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI--SSALRVNPALA 58
Query: 351 ALGLYGNRFGGVLPHSIANL 370
L L N G V H +
Sbjct: 59 ELNLRSNELGDVGVHCVLQG 78
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 55.6 bits (132), Expect = 1e-08
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 500 LSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL 559
N ++ + +L EL++S N++ E+PA LE L S+N +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPP---RLERLIASFNHL-AEVPE 321
Query: 560 SLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLN 595
+LK L + N L + P E++ L +N
Sbjct: 322 LPQNLKQ---LHVEYNPLR-EFPDIPESVEDL-RMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 13/99 (13%)
Query: 451 LQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLP 510
N I S SL LNVS NKL LP + L S N L +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLE----RLIASFNHLA-EVP 320
Query: 511 LEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLS 549
QNL +L + N + E P S+E L ++
Sbjct: 321 ---ELPQNLKQLHVEYNPLR-EFPDIPE---SVEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 43.3 bits (100), Expect = 1e-04
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 382 NQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLG 441
N S I S +L + N+L +P +L L FN L +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLER---LIASFNHLA-EVPELPQ 324
Query: 442 NLTLLTELELQSNYLQG--NIPSSLGNCR 468
N L +L ++ N L+ +IP S+ + R
Sbjct: 325 N---LKQLHVEYNPLREFPDIPESVEDLR 350
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 42.5 bits (98), Expect = 2e-04
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 10/89 (11%)
Query: 336 DLDFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNL 395
+ + L L + N+ LP L + N ++ +P NL
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLIE-LPALPPRLER----LIASFNHLA-EVPELPQNL 326
Query: 396 VNLNGFGIDLNQLTGTIPHEIGKLTNLQL 424
L+ ++ N L P + +L++
Sbjct: 327 KQLH---VEYNPLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 40.2 bits (92), Expect = 0.001
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 129 MLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQL 188
+ N+ S +I + +L N L+ + RLE+L + NHL ++
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-----ELPALPPRLERLIASFNHLA-EV 319
Query: 189 PASIGNLSVLKVINVEENRLSGRIPNTLGQLRN 221
P NL L +VE N L P+ + +
Sbjct: 320 PELPQNLKQL---HVEYNPLRE-FPDIPESVED 348
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.3 bits (87), Expect = 0.004
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 230 NQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSF 289
N S + SLE L + N+L I++ P+L + + N+ + +P
Sbjct: 270 NASSNEIRSLCDLPPSLEELNVSNNKL-----IELPALPPRLERLIASFNHLAE-VPELP 323
Query: 290 SNTSNLVMLDLNLNLFSGKVPINFSRLQNL 319
NL L + N + P +++L
Sbjct: 324 ---QNLKQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 49.3 bits (117), Expect = 1e-07
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTG 482
++L+L L ++ L L L+T L+L N L+ P+ L R L L S N L
Sbjct: 1 RVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN 57
Query: 483 ALPKQIFNITTLSLYLDLSNNFLND-SLPLEVGNLQNLVELDISRNQVSGE---IPATLS 538
L L NN L + + + LV L++ N + E
Sbjct: 58 VDGVANLPRLQ---ELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAE 114
Query: 539 ACTSLEYL 546
S+ +
Sbjct: 115 MLPSVSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.9 bits (116), Expect = 2e-07
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 497 YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG 556
L L++ L ++ + L + LD+S N++ PA L+A LE L S N+
Sbjct: 2 VLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALE-- 56
Query: 557 IPLSLSSLKSVKVLDLSSNNL-SGQIPKYLENLSFLEYLNISSNHFEGK 604
+++L ++ L L +N L + L + L LN+ N +
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.6 bits (110), Expect = 1e-06
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 473 LNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGE 532
L+++ LT + + ++ +LDLS+N L P + L+ L L S N +
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVT-HLDLSHNRLRALPP-ALAALRCLEVLQASDNALENV 58
Query: 533 IPATLSACTSLEYLNLSYNSFRGGIPL-SLSSLKSVKVLDLSSNNLSGQIPKYLENLSFL 591
L+ L L N + + L S + +L+L N+L E L+ +
Sbjct: 59 DGVA--NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ-EEGIQERLAEM 115
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 38.5 bits (89), Expect = 6e-04
Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 7/107 (6%)
Query: 224 YLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSG 283
L++A + V + L + L L NRL P L ++ ++ +
Sbjct: 2 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQA----SDNAL 55
Query: 284 PIPNSFSNTSNLVMLDLNLN-LFSGKVPINFSRLQNLSWLLLAGNNL 329
+ +N L L L N L L L L GN+L
Sbjct: 56 ENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 36.6 bits (84), Expect = 0.003
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Query: 173 RLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRLSGRIPNTLGQLRNSFYLNIAGNQF 232
+ L ++ N L P ++ L L+V+ +N L L L + N+
Sbjct: 21 LVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVDGVA--NLPRLQELLLCNNRL 77
Query: 233 -SGNVPPSIYNLSSLELLYLRGNRL--IGSLPIDIGLTLPKLTNFV 275
+ + L LL L+GN L + + LP +++ +
Sbjct: 78 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 123
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 50.4 bits (119), Expect = 2e-07
Identities = 36/224 (16%), Positives = 70/224 (31%), Gaps = 21/224 (9%)
Query: 375 VQINMGRNQISGTIP-SGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE 433
++I G++ ++ T+ + + + L+ FG + + G + L NL L L N +
Sbjct: 22 IKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEG-----VQYLNNLIGLELKDNQIT 76
Query: 434 GSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITT 493
P EL I L+ + A + +
Sbjct: 77 DLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYL 136
Query: 494 LSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSF 553
+ + + +S L+ + L L N
Sbjct: 137 DLNQITNISPLAGLTNLQY-----------LSIGNAQVSDLTPLANLSKLTTLKADDNKI 185
Query: 554 RGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNIS 597
PL+ SL ++ + L +N +S P L N S L + ++
Sbjct: 186 SDISPLA--SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 40/234 (17%), Positives = 75/234 (32%), Gaps = 26/234 (11%)
Query: 218 QLRNSFYLNIAGNQFSGNVPPSIYNLSSLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIA 277
L N+ + + + V + +L + L G + + L L +
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTIEGVQ---YLNNLIGLELK 71
Query: 278 ENNFSGPIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDL 337
+N + P NL + + L + + +
Sbjct: 72 DNQITDLAPLK------------NLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQI 119
Query: 338 DFITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVN 397
+TPL S L L L N+ +I+ L+ T + + + + NL
Sbjct: 120 TDVTPLAGLSNLQVLYLDLNQI-----TNISPLAGLTNLQYLSIGNAQVSDLTPLANLSK 174
Query: 398 LNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELEL 451
L D N+++ P + L NL ++L N + P L N + L + L
Sbjct: 175 LTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 41/247 (16%), Positives = 76/247 (30%), Gaps = 29/247 (11%)
Query: 284 PIPNSF--SNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFIT 341
I F +N + + + + V + L ++ L G + I
Sbjct: 8 AINVIFPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT--------IE 57
Query: 342 PLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGF 401
+ + LI L L N+ + P T +S ++L
Sbjct: 58 GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTST 117
Query: 402 GIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIP 461
I + + +L + L + L Q +
Sbjct: 118 QITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQ-----------YLSIGNAQVSDL 166
Query: 462 SSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVE 521
+ L N L +L NK++ P + ++ L + L NN ++D PL N NL
Sbjct: 167 TPLANLSKLTTLKADDNKISDISP--LASLPNLI-EVHLKNNQISDVSPL--ANTSNLFI 221
Query: 522 LDISRNQ 528
+ ++ NQ
Sbjct: 222 VTLT-NQ 227
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.5 bits (119), Expect = 4e-07
Identities = 39/250 (15%), Positives = 78/250 (31%), Gaps = 15/250 (6%)
Query: 348 KLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISG-TIPSGIGNLVNLNGFGIDLN 406
+IA + L + +++ + I T+ + L ++
Sbjct: 24 GVIAFRCPRSFMDQPLAEHFSPFRVQH--MDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81
Query: 407 QLTGTIPHEIGKLTNLQLLYLDF--NLLEGSIPFSLGNLTLLTELELQSNYLQG------ 458
+L+ I + + K +NL L L E ++ L + + L EL L +
Sbjct: 82 RLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 141
Query: 459 NIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQN 518
+ L +N L + L + L + E L
Sbjct: 142 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 201
Query: 519 LVELDISR-NQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
L L +SR + E L +L+ L + G + L +L L ++ ++
Sbjct: 202 LQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPH---LQINCSHF 258
Query: 578 SGQIPKYLEN 587
+ + N
Sbjct: 259 TTIARPTIGN 268
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.5 bits (106), Expect = 2e-05
Identities = 34/222 (15%), Positives = 72/222 (32%), Gaps = 11/222 (4%)
Query: 389 PSGIGNLVNLNGFGIDLNQL-TGTIPHEIGKLTNLQLLYLDFN-LLEGSIPFSLGNLTLL 446
P G L++ + E +Q + L + + ++ L + L
Sbjct: 14 PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 73
Query: 447 TELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYL-------D 499
L L+ L I ++L +L+ LN+S Q + L D
Sbjct: 74 QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 133
Query: 500 LSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG-IP 558
+ + ++ + L +N ++ + C +L +L+LS +
Sbjct: 134 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCF 193
Query: 559 LSLSSLKSVKVLDLSS-NNLSGQIPKYLENLSFLEYLNISSN 599
L ++ L LS ++ + L + L+ L +
Sbjct: 194 QEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 8e-07
Identities = 26/146 (17%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 450 ELQSNYLQGNIPSSLGNC--RSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLND 507
EL+ ++ + + S +L++ + L Q + + L+ ++
Sbjct: 3 ELKPEQVE-QLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ-----NIDVVLNRRSSMAA- 55
Query: 508 SLPLEVGNLQNLVELDISRNQVSG--EIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLK 565
+L + N+ L+ L++S N++ ++ + + +L+ LNLS N + L
Sbjct: 56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL 115
Query: 566 SVKVLDLSSNNLSGQIPKYLENLSFL 591
++ L L N+LS +S +
Sbjct: 116 KLEELWLDGNSLSDTFRDQSTYISAI 141
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 3e-06
Identities = 30/144 (20%), Positives = 45/144 (31%), Gaps = 11/144 (7%)
Query: 412 IPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLL 471
+ + K + LD L L + L +S+ + N LL
Sbjct: 12 LKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELL 68
Query: 472 SLNVSQNKLTGALPKQIFNITTLSL-YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVS 530
SLN+S N+L +L L+LS N L L+ L EL + N +S
Sbjct: 69 SLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128
Query: 531 GEIPAT-------LSACTSLEYLN 547
L L+
Sbjct: 129 DTFRDQSTYISAIRERFPKLLRLD 152
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 44.4 bits (103), Expect = 2e-05
Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 39/189 (20%)
Query: 63 CQWTGVTCGHRH---------QRVTKLYLR-NQSIGGILSPHVGNLSFLR---------- 102
C+ T V C R T+L L N+ G L L
Sbjct: 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 103 --------------LIDLADNNFYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSN 148
+ L +N L +L TL L +N S +P + ++
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 149 LINFLAHGNNLVGQIAANIGYNWMRLEKLSIADNHLTGQLPASIGNLSVLKVINVEENRL 208
L + N W+R K S+ P+ + ++ + ++ +
Sbjct: 128 LTSLNLASNPFNCNCHLAWFAEWLR--KKSLNGGAARCGAPSKVRDVQIK---DLPHSEF 182
Query: 209 SGRIPNTLG 217
N+ G
Sbjct: 183 KCSSENSEG 191
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 40.2 bits (92), Expect = 5e-04
Identities = 31/166 (18%), Positives = 50/166 (30%), Gaps = 28/166 (16%)
Query: 435 SIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTL 494
IP + TEL L N L L L + + F +
Sbjct: 22 EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 495 SLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEY--------- 545
L L N + + L L L++ NQ+S +P + SL
Sbjct: 80 IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Query: 546 --------------LNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNL 577
+L+ + R G P S ++ V++ DL +
Sbjct: 140 CNCHLAWFAEWLRKKSLNGGAARCGAP---SKVRDVQIKDLPHSEF 182
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 29/209 (13%)
Query: 387 TIPSGIGNLVNLNGF------GIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSL 440
T+P+ I + + + F + +T + +L ++ + + + ++ +
Sbjct: 9 TVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS--VQGI 64
Query: 441 GNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLT---------------GALP 485
L +T+L L N L P + L L+ ++ K
Sbjct: 65 QYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGI 124
Query: 486 KQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEY 545
I + L L + + L L L + NQ+S +P L+ T L+
Sbjct: 125 SDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQN 182
Query: 546 LNLSYNSFRGGIPLSLSSLKSVKVLDLSS 574
L LS N + +L+ LK++ VL+L S
Sbjct: 183 LYLSKNHIS-DLR-ALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 18/210 (8%)
Query: 340 ITPLTNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLN 399
I ++ I L + + L++ QI + I GI L N+
Sbjct: 17 IFSDDAFAETIKDNLKKKSVTDAV--TQNELNSID-QIIANNSDIKSVQ--GIQYLPNVT 71
Query: 400 GFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGN 459
++ N+LT + L NL L+LD N ++ L + +
Sbjct: 72 KLFLNGNKLTD--IKPLANLKNLGWLFLDENKVKDLSSLKDLK----KLKSLSLEHNGIS 125
Query: 460 IPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNL 519
+ L + L SL + NK+T +N ++D +PL L L
Sbjct: 126 DINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSL---EDNQISDIVPL--AGLTKL 180
Query: 520 VELDISRNQVSGEIPATLSACTSLEYLNLS 549
L +S+N +S ++ A L+ +L+ L L
Sbjct: 181 QNLYLSKNHIS-DLRA-LAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.1 bits (100), Expect = 7e-05
Identities = 32/215 (14%), Positives = 77/215 (35%), Gaps = 27/215 (12%)
Query: 404 DLNQLTGTIPHEIGK------LTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQ 457
L T T+P I + L + ++ + L + ++ ++ ++
Sbjct: 2 PLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIK 59
Query: 458 GNIPSSLGNCRSLLSLNVSQNKLTGAL--------------PKQIFNITTLSLYLDLSNN 503
+ ++ L ++ NKLT ++ ++++L L +
Sbjct: 60 SVQG--IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSL 117
Query: 504 FLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSS 563
L + ++ L +L +L+ + T+ + + ++ I L+
Sbjct: 118 SLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV-PLAG 176
Query: 564 LKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISS 598
L ++ L LS N++S + L L L+ L + S
Sbjct: 177 LTKLQNLYLSKNHISD--LRALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 0.001
Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 31/210 (14%)
Query: 284 PIPNSFSNTSNLVMLDLNLNLFSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPL 343
PI FS+ + + NL S + + L ++ ++ +++ + + +
Sbjct: 13 PIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKS--------VQGI 64
Query: 344 TNCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGI 403
+ L L GN+ +ANL + + L +L+
Sbjct: 65 QYLPNVTKLFLNGNKLTD--IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHN 122
Query: 404 DLNQLTG-----------------TIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLL 446
++ + G T + +LT L L L+ N + +P + LT L
Sbjct: 123 GISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLA--GLTKL 180
Query: 447 TELELQSNYLQGNIPSSLGNCRSLLSLNVS 476
L L N++ +L ++L L +
Sbjct: 181 QNLYLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.8 bits (89), Expect = 0.001
Identities = 42/215 (19%), Positives = 74/215 (34%), Gaps = 23/215 (10%)
Query: 253 GNRLIGSLPIDIGLTLP-----KLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNLFSG 307
G+ I ++P I + + + + + + + +++ + N +
Sbjct: 4 GSETI-TVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKS 60
Query: 308 KVPINFSRLQNLSWLLLAGN---------NLGNGAANDLDFITPLTNCSKLIALGLYGNR 358
I + L N++ L L GN NL N LD S L
Sbjct: 61 VQGIQY--LPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLS 118
Query: 359 FGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGK 418
I L ++ T + + L L+ ++ NQ++ +P +
Sbjct: 119 LEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAG 176
Query: 419 LTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQS 453
LT LQ LYL N + + +L L L LEL S
Sbjct: 177 LTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFS 209
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 1e-04
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Query: 500 LSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPL 559
L+ + + + N ELD+ ++ I + + ++ S N R
Sbjct: 3 LTAELIEQAA--QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDG- 58
Query: 560 SLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSNHFE 602
L+ +K L +++N + + L L L +++N
Sbjct: 59 -FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 100
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 2e-04
Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 3/134 (2%)
Query: 406 NQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIP-FSLGNLTLLTELELQSNYLQGNIPSSL 464
+ H + NL LY++ + L L L L + + L+ P +
Sbjct: 18 DGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF 76
Query: 465 GNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDI 524
L LN+S N L +L + +L + N + + +
Sbjct: 77 HFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGV 135
Query: 525 SRNQVSGEIPATLS 538
++ L+
Sbjct: 136 PEQKLQCHGQGPLA 149
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (89), Expect = 8e-04
Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 13/149 (8%)
Query: 63 CQWTGVTCGHRH-----------QRVTKLYLR-NQSIGGILSPHVGNLSFLRLIDLADNN 110
+G+ C + +T+LY+ Q + + + L LR + + +
Sbjct: 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Query: 111 FYGNIPHEVGRLSRLDTLMLANNSFSGKIPTNLSGCSNLINFLAHGNNLVGQIAANIGYN 170
P RL L L+ N+ + +L + GN L A
Sbjct: 68 LRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQR 126
Query: 171 WMRLEKLSIADNHLTGQLPASIGNLSVLK 199
W + + L + ++
Sbjct: 127 WEEEGLGGVPEQKLQCHGQGPLAHMPNAS 155
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 35/240 (14%), Positives = 70/240 (29%), Gaps = 10/240 (4%)
Query: 364 PHSIANLSTTTVQINMGRNQISGTIPSGI-GNLVNLNGFGIDLNQLTGTIPHEIGKLTNL 422
H I + S ++++ IPS + N + L L +L +L
Sbjct: 2 HHRICHCSNRVFLCQ--ESKVT-EIPSDLPRNAIELR---FVLTKLRVIQKGAFSGFGDL 55
Query: 423 QLLYLDFNLLEGSIPFSLGNLTLLTELELQ---SNYLQGNIPSSLGNCRSLLSLNVSQNK 479
+ + + N + I + + +N L N + L +
Sbjct: 56 EKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI 115
Query: 480 LTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSA 539
+I ++ + L + + N VG V L +++N + +
Sbjct: 116 KHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNG 175
Query: 540 CTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQIPKYLENLSFLEYLNISSN 599
E N+ +LD+S + LENL L + +
Sbjct: 176 TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (88), Expect = 0.002
Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 2/82 (2%)
Query: 497 YLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGG 556
L L+ N + + Q N + + L++S
Sbjct: 157 ILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 216
Query: 557 IPLSLSSLKSVKVLDLSSNNLS 578
L +LK ++ NL
Sbjct: 217 PSYGLENLKKLRARST--YNLK 236
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.003
Identities = 21/235 (8%), Positives = 54/235 (22%), Gaps = 7/235 (2%)
Query: 245 SLELLYLRGNRLIGSLPIDIGLTLPKLTNFVIAENNFSGPIPNSFSNTSNLVMLDLNLNL 304
S + + +++ +P D+ +FS +L ++++ N
Sbjct: 9 SNRVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQND 64
Query: 305 FSGKVPINFSRLQNLSWLLLAGNNLGNGAANDLDFITPLTNCSKLIALGLYGNRFGGVLP 364
+ + + N F LI+ +
Sbjct: 65 VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 124
Query: 365 HSIANLSTTTVQINMGRNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQL 424
HS+ + + V L + ++ +
Sbjct: 125 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLS 184
Query: 425 LYLDFNLLEGSIPFSLGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNK 479
+ L + L++ + L N + L + + K
Sbjct: 185 DNNNLEEL---PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.4 bits (95), Expect = 4e-04
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 489 FNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGE----IPATLSACTSLE 544
F+I SL LD S+ + ++ E+ +S N + E + +++ LE
Sbjct: 3 FSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLE 62
Query: 545 YLNLSYNSF 553
S
Sbjct: 63 IAEFSDIFT 71
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 40.6 bits (93), Expect = 7e-04
Identities = 40/305 (13%), Positives = 83/305 (27%), Gaps = 30/305 (9%)
Query: 328 NLGNGAANDLD-FITPLTNCSKLIALGLYGNRFGG----VLPHSIANLSTTTVQI--NMG 380
L D L + + L GN G L +IA+ + ++
Sbjct: 11 KLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIF 70
Query: 381 RNQISGTIPSGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSL 440
++ IP + L+ L+ + + + +L + +
Sbjct: 71 TGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHN 130
Query: 441 GNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDL 500
L ++ + + N L S+ +N+L K+ L
Sbjct: 131 NGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 190
Query: 501 SNN------------FLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNL 548
L + L ++ + + S + L + +L L L
Sbjct: 191 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 250
Query: 549 SYNSFRGGIP------LSLSSLKSVKVLDLSSNNLSGQIPKYL-----ENLSFLEYLNIS 597
+ S ++ L L N + + L E + L +L ++
Sbjct: 251 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 310
Query: 598 SNHFE 602
N F
Sbjct: 311 GNRFS 315
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.1 bits (89), Expect = 0.002
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 542 SLEYLNLSYNSFRGGIPLSLSSLKSVKVLDLSSNNLSGQ----IPKYLENLSFLEYLNIS 597
SL+ ++ + + L SVK + LS N + + + + + + LE S
Sbjct: 9 SLKLDAITTEDEKS-VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 598 SNHF 601
Sbjct: 68 DIFT 71
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.7 bits (88), Expect = 0.003
Identities = 34/308 (11%), Positives = 75/308 (24%), Gaps = 24/308 (7%)
Query: 284 PIPNSFSNTSNLVMLDLNLNLFSGK----VPINFSRLQNLSWLLLAGNNLGNGAANDLDF 339
+ ++ + L+ N + + N + ++L + G +
Sbjct: 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEA 81
Query: 340 ITPLT----NCSKLIALGLYGNRFGGVLPHSIANLSTTTVQINMGRNQISGTIPSGIGNL 395
+ L C KL + L N FG + + + + +G P +
Sbjct: 82 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 141
Query: 396 VNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQSNY 455
+ P +L + T+
Sbjct: 142 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE 201
Query: 456 LQGNIPSSLGNCRSLLSLNVSQNKLTG----ALPKQIFNITTLSLYLDLSNNFLND---- 507
++ L + Q+ + L L++ L+
Sbjct: 202 GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261
Query: 508 --SLPLEVGNLQNLVELDISRNQVSGEIPATLSA-----CTSLEYLNLSYNSFRGGIPLS 560
L L + N++ + TL L +L L+ N F
Sbjct: 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF-SEEDDV 320
Query: 561 LSSLKSVK 568
+ ++ V
Sbjct: 321 VDEIREVF 328
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.3 bits (90), Expect = 0.001
Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 25/188 (13%)
Query: 375 VQINMGRNQISGTIP-SGIGNLVNLNGFGIDLNQLTGTIPHEIGKLTNLQLLYLDFNLLE 433
++ +G+ ++ T+ + + + L + + + G + L NL + N L
Sbjct: 21 MKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLT 75
Query: 434 GSIPFS---------------LGNLTLLTELELQSNYLQGNIPSSLGNCRSLLSLNVSQN 478
P L L L N + + ++L +LN +
Sbjct: 76 DITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLEL 135
Query: 479 KLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLEVGNLQNLVELDISRNQVSGEIPATLS 538
+ T L+ S+N + D PL NL L LDIS N+VS + L+
Sbjct: 136 SSNTISDISALSGLTSLQQLNFSSNQVTDLKPL--ANLTTLERLDISSNKVSD--ISVLA 191
Query: 539 ACTSLEYL 546
T+LE L
Sbjct: 192 KLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.7 bits (86), Expect = 0.003
Identities = 38/202 (18%), Positives = 73/202 (36%), Gaps = 19/202 (9%)
Query: 394 NLVNLNGFGIDLNQLTGTIPH-EIGKLTNLQLLYLDFNLLEGSIPFSLGNLTLLTELELQ 452
L + +T T+ ++ ++T LQ L ++G + L LT++
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFS 70
Query: 453 SNYLQGNIPSSLGNCRSLLSLNVSQNKLTGALPKQIFNITTLSLYLDLSNNFLNDSLPLE 512
+N L P ++ N A + N+T L+ +N +
Sbjct: 71 NNQLTDITPLKNLTKLV----DILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 126
Query: 513 VGNLQNLVELDISRNQVSGEIPATLSACTSLEYLNLSYNSFRGGIPLSLSSLKSVKVLDL 572
+ NL L + + +S T + ++ L++L +++ LD+
Sbjct: 127 LTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTD-------LKPLANLTTLERLDI 179
Query: 573 SSNNLSGQIPKYLENLSFLEYL 594
SSN +S L L+ LE L
Sbjct: 180 SSNKVSD--ISVLAKLTNLESL 199
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Score = 39.2 bits (90), Expect = 0.001
Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
Query: 776 HGVDFKALVYEYMQNGSLEEWLHHSNDQHDVCDLSLIQRLHIAID--IAYAIEYLHHHCQ 833
H +D +++ +E D + +A A +
Sbjct: 115 HTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGED 174
Query: 834 PPIIHGDLKPSNVLLDHDMVAHVGDFGLA 862
+ HGD N+++++ + D G
Sbjct: 175 LVVTHGDACLPNIMVENGRFSGFIDCGRL 203
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1019 | |||
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1ejda_ | 419 | UDP-N-acetylglucosamine enolpyruvyl transferase (E | 100.0 | |
| d2df7a1 | 419 | Birnavirus VP2 {Infectious bursal disease virus [T | 100.0 | |
| d1om4a_ | 418 | Nitric oxide (NO) synthase oxygenase domain {Rat ( | 100.0 | |
| d2gp4a2 | 418 | 6-phosphogluconate dehydratase EDD {Shewanella one | 100.0 | |
| d1f61a_ | 418 | Isocitrate lyase {Mycobacterium tuberculosis [TaxI | 100.0 | |
| d2r5ea1 | 418 | Kynurenine--oxoglutarate transaminase I {Yellowfev | 100.0 | |
| d1w7la_ | 418 | Kynurenine--oxoglutarate transaminase I {Human (Ho | 100.0 | |
| d1pv7a_ | 417 | Lactose permease {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1w6ga1 | 417 | Copper amine oxidase, domain 3 {Arthrobacter globi | 100.0 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 100.0 | |
| d3bona1 | 417 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d2csga1 | 417 | Hypothetical protein YbiU {Salmonella typhimurium | 100.0 | |
| d1ltka_ | 417 | Phosphoglycerate kinase {Malaria parasite (Plasmod | 100.0 | |
| d1gff1_ | 417 | Microvirus capsid proteins {Bacteriophage G4 [TaxI | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1q2oa_ | 416 | Nitric oxide (NO) synthase oxygenase domain {Cow ( | 100.0 | |
| d1dfoa_ | 416 | Serine hydroxymethyltransferase {Escherichia coli | 100.0 | |
| d1d8wa_ | 416 | L-rhamnose isomerase {Escherichia coli [TaxId: 562 | 100.0 | |
| d2vnud4 | 416 | Exosome complex exonuclease RRP44 {Saccharomyces c | 100.0 | |
| d1igwa_ | 416 | Isocitrate lyase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1pb1a_ | 416 | Isocitrate dehydrogenase, ICDH {Escherichia coli [ | 100.0 | |
| d1dnva_ | 415 | Densovirus capsid protein {Galleria mellonella den | 100.0 | |
| d1so2a_ | 415 | cGMP-inhibited 3',5'-cyclic phosphodiesterase B, p | 100.0 | |
| d16pka_ | 415 | Phosphoglycerate kinase {Trypanosoma brucei [TaxId | 100.0 | |
| d2ieaa2 | 415 | Pyruvate dehydrogenase E1 component, PP module {Es | 100.0 | |
| d1qpga_ | 415 | Phosphoglycerate kinase {Baker's yeast (Saccharomy | 100.0 | |
| d2qeec1 | 415 | Uncharacterized protein BH0493 {Bacillus haloduran | 100.0 | |
| d1s5ja2 | 415 | Family B DNA polymerase {Sulfolobus solfataricus [ | 100.0 | |
| d2b8na1 | 414 | Putative glycerate kinase (hypothetical protein TM | 100.0 | |
| d1kbia1 | 414 | Flavocytochrome b2, C-terminal domain {Baker's yea | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1t0la_ | 414 | NADP-dependent isocitrate dehydrogenase {Human (Ho | 100.0 | |
| d1t5la1 | 413 | Nucleotide excision repair enzyme UvrB {Bacillus c | 100.0 | |
| d1vh4a_ | 413 | Stabilizer of iron transporter SufD {Escherichia c | 100.0 | |
| d1hdia_ | 413 | Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: | 100.0 | |
| d2qgma1 | 413 | Succinoglycan biosynthesis protein BC3205 {Bacillu | 100.0 | |
| d1lwda_ | 413 | NADP-dependent isocitrate dehydrogenase {Pig (Sus | 100.0 | |
| d1zjca1 | 413 | Aminopeptidase S, AMPS {Staphylococcus aureus [Tax | 100.0 | |
| d1ulva1 | 413 | Glucodextranase, domain A {Arthrobacter globiformi | 100.0 | |
| d1a0tp_ | 413 | Sucrose-specific porin {Enterobacterium (Salmonell | 100.0 | |
| d1ocka_ | 412 | Malonamidase E2 {Bradyrhizobium japonicum [TaxId: | 100.0 | |
| d1yzya1 | 412 | Hypothetical protein HI1011 {Haemophilus influenza | 100.0 | |
| d1yaaa_ | 412 | Aspartate aminotransferase, AAT {Baker's yeast (Sa | 100.0 | |
| d1rxxa_ | 412 | Arginine deiminase {Pseudomonas aeruginosa [TaxId: | 100.0 | |
| d1ajsa_ | 412 | Aspartate aminotransferase, AAT {Pig (Sus scrofa), | 100.0 | |
| d1ufaa2 | 412 | Hypothetical protein TT1467, N-terminal domain {Th | 100.0 | |
| d1bw0a_ | 412 | Tyrosine aminotransferase (TAT) {Trypanosoma cruzi | 100.0 | |
| d1t3ca_ | 411 | Botulinum neurotoxin {Clostridium botulinum, serot | 100.0 | |
| d2afaa1 | 411 | Putative NAG isomerase YihS {Salmonella typhimuriu | 100.0 | |
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d1izoa_ | 411 | Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis | 100.0 | |
| d2ccaa1 | 410 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 | |
| d1p1ja1 | 410 | Myo-inositol 1-phosphate synthase {Baker's yeast ( | 100.0 | |
| d1kfsa2 | 410 | DNA polymerase I (Klenow fragment) {Escherichia co | 100.0 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 100.0 | |
| d1s5ja1 | 410 | Exonuclease domain of family B DNA polymerases {Su | 100.0 | |
| d2cmza1 | 409 | Spike glycoprotein {Vesicular stomatitis indiana v | 100.0 | |
| d1tv5a1 | 409 | Dihydroorotate dehydrogenase {Plasmodium falciparu | 100.0 | |
| d1qtma2 | 409 | DNA polymerase I (Klenow fragment) {Thermus aquati | 100.0 | |
| d2g0da1 | 409 | Nisin biosynthesis protein NisC {Lactococcus lacti | 100.0 | |
| d1b25a1 | 409 | Formaldehyde ferredoxin oxidoreductase {Archaeon P | 100.0 | |
| d1s9ra_ | 409 | Arginine deiminase {Mycoplasma arginini [TaxId: 20 | 100.0 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 100.0 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 100.0 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 100.0 | |
| d1r76a_ | 408 | Polygalacturonic acid lyase (pectate lyase) {Azosp | 100.0 | |
| d1c4oa1 | 408 | Nucleotide excision repair enzyme UvrB {Thermus th | 100.0 | |
| d1f1oa_ | 408 | Adenylosuccinate lyase {Bacillus subtilis [TaxId: | 100.0 | |
| d2hhva2 | 408 | DNA polymerase I (Klenow fragment) {Bacillus stear | 100.0 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1t3ia_ | 408 | Probable cysteine desulfurase SufS {Synechocystis | 100.0 | |
| d1qs0a_ | 407 | 2-oxoisovalerate dehydrogenase (E1B), PP module {P | 100.0 | |
| d1eu8a_ | 407 | D-maltodextrin-binding protein, MBP {Archaeon Ther | 100.0 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 100.0 | |
| d1mwva1 | 406 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1itka1 | 406 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 100.0 | |
| d1ub2a1 | 406 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d1ei6a_ | 406 | Phosphonoacetate hydrolase {Pseudomonas fluorescen | 100.0 | |
| d2ayia1 | 406 | Aminopeptidase T {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 100.0 | |
| d1kl1a_ | 405 | Serine hydroxymethyltransferase {Bacillus stearoth | 100.0 | |
| d2nwwa1 | 405 | Proton glutamate symport protein {Pyrococcus horik | 100.0 | |
| d1h6za3 | 405 | Pyruvate phosphate dikinase, N-terminal domain {Tr | 100.0 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 100.0 | |
| d1jf9a_ | 405 | NifS-like protein/selenocysteine lyase {Escherichi | 100.0 | |
| d1uyra2 | 404 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 100.0 | |
| d1z7da1 | 404 | Ornithine aminotransferase {Plasmodium yoelii yoel | 100.0 | |
| d1re9a_ | 404 | Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 | 100.0 | |
| d1qz9a_ | 404 | Kynureninase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d2b5dx2 | 404 | Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 | 100.0 | |
| d2byla1 | 404 | Ornithine aminotransferase {Human (Homo sapiens) [ | 100.0 | |
| d1h12a_ | 404 | Endo-1,4-beta-xylanase {Pseudoalteromonas haloplan | 100.0 | |
| d1wsta1 | 403 | Multiple substrate aminotransferase, MSAT {Thermoc | 100.0 | |
| d1ueda_ | 403 | p450 monoxygenase OxyC {Amycolatopsis orientalis [ | 100.0 | |
| d1xksa_ | 403 | Nuclear pore complex protein Nup133 {Human (Homo s | 100.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 100.0 | |
| d1gwia_ | 403 | Cyp154c1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d3b55a1 | 403 | Succinoglycan biosynthesis protein BC3120 {Bacillu | 100.0 | |
| d1dofa_ | 402 | Adenylosuccinate lyase {Archaeon Pyrobaculum aerop | 100.0 | |
| d2g5da1 | 402 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 100.0 | |
| d1fp3a_ | 402 | N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) | 100.0 | |
| d1z8oa1 | 402 | Cytochrome P450-ERYF {Saccharopolyspora erythraea | 100.0 | |
| g1w2w.1 | 402 | Putative methylthioribose-1-phosphate isomerase Yp | 100.0 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1fc4a_ | 401 | 2-amino-3-ketobutyrate CoA ligase {Escherichia col | 100.0 | |
| d2h6fb1 | 401 | Protein farnesyltransferase, beta-subunit {Human ( | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1q5da_ | 401 | Cytochrome P450epok {Sorangium cellulosum [TaxId: | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jdpa_ | 401 | Hormone binding domain of the atrial natriuretic p | 100.0 | |
| d7aata_ | 401 | Aspartate aminotransferase, AAT {Chicken (Gallus g | 100.0 | |
| d2r7da2 | 401 | Ribonuclease II family protein DR0020 {Deinococcus | 100.0 | |
| d1odoa_ | 401 | Cyp154a1 monooxygenase {Streptomyces coelicolor [T | 100.0 | |
| d1ru4a_ | 400 | Pectate transeliminase {Erwinia chrysanthemi [TaxI | 100.0 | |
| d1tq4a_ | 400 | Interferon-inducible GTPase {Mouse (Mus musculus) | 100.0 | |
| d3ovwa_ | 400 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1inpa_ | 400 | Inositol polyphosphate 1-phosphatase {Cow (Bos tau | 100.0 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d2olua2 | 400 | Penicillin-binding protein 2, PBP2 {Staphylococcus | 100.0 | |
| d1oyaa_ | 399 | Old yellow enzyme (OYE) {Lager yeast (Saccharomyce | 100.0 | |
| d1jfba_ | 399 | Cytochrome P450-NOR, nitric reductase {Fungus (Fus | 100.0 | |
| d1s1fa_ | 399 | Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | 100.0 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 100.0 | |
| d1bn8a_ | 399 | Pectate lyase {Bacillus subtilis [TaxId: 1423]} | 100.0 | |
| d1ojja_ | 399 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1vpea_ | 398 | Phosphoglycerate kinase {Thermotoga maritima [TaxI | 100.0 | |
| d1qgna_ | 398 | Cystathionine gamma-synthase, CGS {Common tobacco | 100.0 | |
| d1vlja_ | 398 | NADH-dependent butanol dehydrogenase A (TM0820) {T | 100.0 | |
| d1y4ia1 | 397 | Methionine gamma-lyase, MGL {Citrobacter freundii | 100.0 | |
| d1q1la_ | 397 | Chorismate synthase, AroC {Aquifex aeolicus [TaxId | 100.0 | |
| d1vkoa1 | 397 | Myo-inositol 1-phosphate synthase {Caenorhabditis | 100.0 | |
| d3tata_ | 397 | Aromatic aminoacid aminotransferase, AroAT {Escher | 100.0 | |
| d1vjva_ | 397 | Ubiquitin carboxyl-terminal hydrolase 6 {Baker's y | 100.0 | |
| d1lf6a1 | 397 | Bacterial glucoamylase, C-terminal domain {Thermoa | 100.0 | |
| d2bwna1 | 396 | 5-aminolevulinate synthase {Rhodobacter capsulatus | 100.0 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 100.0 | |
| d2q7wa1 | 396 | Aspartate aminotransferase, AAT {Escherichia coli | 100.0 | |
| d1io1a_ | 395 | Phase 1 flagellin {Salmonella typhimurium [TaxId: | 100.0 | |
| g1f8v.1 | 395 | Alphanodavirus capsid protein {Pariacoto virus [Ta | 100.0 | |
| d2bfda1 | 395 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d2py6a1 | 395 | Methyltransferase FkbM {Methylobacillus flagellatu | 100.0 | |
| d1w36b2 | 395 | Exodeoxyribonuclease V beta chain (RecB), N-termin | 100.0 | |
| d1aora1 | 395 | Aldehyde ferredoxin oxidoreductase {Archaeon Pyroc | 100.0 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 100.0 | |
| d1xi9a_ | 395 | Putative alanine aminotransferase {Pyrococcus furi | 100.0 | |
| d1n40a_ | 395 | Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub | 100.0 | |
| d1e5ea_ | 394 | Methionine gamma-lyase, MGL {Trichomonas vaginalis | 100.0 | |
| d1phpa_ | 394 | Phosphoglycerate kinase {Bacillus stearothermophil | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1u1ha1 | 394 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d2ay1a_ | 394 | Aromatic aminoacid aminotransferase, AroAT {Paraco | 100.0 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 100.0 | |
| d1c7na_ | 394 | Cystalysin {Treponema denticola [TaxId: 158]} | 100.0 | |
| d1lfka_ | 394 | p450 monoxygenase OxyB {Amycolatopsis orientalis [ | 100.0 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 100.0 | |
| d1q8ia2 | 394 | Family B DNA polymerase {Escherichia coli [TaxId: | 100.0 | |
| d1ldja2 | 394 | Cullin homolog 1, Cul-1 {Human (Homo sapiens) [Tax | 100.0 | |
| d1n8pa_ | 393 | Cystathionine gamma-lyase (CYS3) {Baker's yeast (S | 100.0 | |
| d1xlma_ | 393 | D-xylose isomerase {Arthrobacter, strain b3728 [Ta | 100.0 | |
| d1g8ma2 | 393 | AICAR transformylase domain of bifunctional purine | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 100.0 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 100.0 | |
| d1gc0a_ | 392 | Methionine gamma-lyase, MGL {Pseudomonas putida [T | 100.0 | |
| d2d0ta1 | 392 | Indoleamine 2,3-dioxygenase {Human (Homo sapiens) | 100.0 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 100.0 | |
| d1xima_ | 392 | D-xylose isomerase {Actinoplanes missouriensis [Ta | 100.0 | |
| d1yvua2 | 392 | Argonaute homologue Aq_1447 {Aquifex aeolicus [Tax | 100.0 | |
| d1cl1a_ | 391 | Cystathionine beta-lyase, CBL {Escherichia coli [T | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 100.0 | |
| d1p3wa_ | 391 | Cysteine desulfurase IscS {Escherichia coli [TaxId | 100.0 | |
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 100.0 | |
| d4ubpc2 | 390 | alpha-subunit of urease, catalytic domain {Bacillu | 100.0 | |
| d1v6sa_ | 390 | Phosphoglycerate kinase {Thermus thermophilus [Tax | 100.0 | |
| d1nsca_ | 390 | Influenza neuraminidase {Influenza B virus, differ | 100.0 | |
| d1qopb_ | 390 | Tryptophan synthase, beta-subunit {Salmonella typh | 100.0 | |
| d1oj7a_ | 390 | Hypothetical oxidoreductase yqhD {Escherichia coli | 100.0 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 100.0 | |
| d1e9yb2 | 389 | alpha-subunit of urease, catalytic domain {Helicob | 100.0 | |
| d1sg6a_ | 389 | Dehydroquinate synthase, DHQS {Aspergillus nidulan | 100.0 | |
| d1jiha2 | 389 | DNA polymerase eta {Baker's yeast (Saccharomyces c | 100.0 | |
| d2gb3a1 | 389 | AAT homologue TM1698 {Thermotoga maritima [TaxId: | 100.0 | |
| d2o3ia1 | 389 | Hypothetical protein CV3147 {Chromobacterium viola | 100.0 | |
| d1f8ea_ | 388 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1u7la_ | 388 | Vacuolar ATP synthase subunit C {Baker's yeast (Sa | 100.0 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 100.0 | |
| d1qxoa_ | 388 | Chorismate synthase, AroC {Streptococcus pneumonia | 100.0 | |
| d2ch1a1 | 388 | 3-hydroxykynurenine transaminase {Malaria mosquito | 100.0 | |
| d1eepa_ | 388 | Inosine monophosphate dehydrogenase (IMPDH) {Lyme | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d2py5a2 | 388 | phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: | 100.0 | |
| d1q8ia1 | 388 | Exonuclease domain of family B DNA polymerases {Es | 100.0 | |
| d1h0ca_ | 388 | Alanine-glyoxylate aminotransferase {Human (Homo s | 100.0 | |
| d1gdea_ | 388 | Aromatic aminoacid aminotransferase, AroAT {Archae | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1j32a_ | 388 | Aspartate aminotransferase, AAT {Phormidium lapide | 100.0 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 100.0 | |
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d1zeea1 | 387 | Hypothetical protein SO4414 {Shewanella oneidensis | 100.0 | |
| d2aepa1 | 387 | Influenza neuraminidase {Influenza A virus, differ | 100.0 | |
| d1qvra2 | 387 | ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 | 100.0 | |
| d1zsqa2 | 387 | Myotubularin-related protein 2, C-terminal domain | 100.0 | |
| d1vefa1 | 387 | Acetylornithine/acetyl-lysine aminotransferase Arg | 100.0 | |
| d1bxba_ | 387 | D-xylose isomerase {Thermus aquaticus, subsp. Ther | 100.0 | |
| d2ex0a1 | 387 | Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteur | 100.0 | |
| d2qp8a1 | 387 | beta-secretase (memapsin) {Human (Homo sapiens) [T | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 100.0 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 100.0 | |
| d1v8za1 | 386 | Tryptophan synthase, beta-subunit {Archaeon Pyroco | 100.0 | |
| d1r6ta2 | 386 | Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo | 100.0 | |
| d1muwa_ | 386 | D-xylose isomerase {Streptomyces olivochromogenes | 100.0 | |
| d3c10a1 | 386 | Histone deacetylase 7, HDAC7 {Human (Homo sapiens) | 100.0 | |
| d1v5da_ | 386 | Chitosanase {Bacillus sp., strain k17 [TaxId: 1409 | 100.0 | |
| d1ejxc2 | 385 | alpha-subunit of urease, catalytic domain {Klebsie | 100.0 | |
| d1rrma_ | 385 | Lactaldehyde reductase FucO {Escherichia coli [Tax | 100.0 | |
| d1xmxa_ | 385 | Hypothetical protein VC1899 {Vibrio cholerae [TaxI | 100.0 | |
| d1uhga_ | 385 | Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | 100.0 | |
| d1ir6a_ | 385 | Exonuclease RecJ {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d2ix0a4 | 385 | Exoribonuclease 2, RNB {Escherichia coli [TaxId: 5 | 100.0 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 100.0 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d1n97a_ | 385 | Cyp175a1 {Thermus thermophilus [TaxId: 274]} | 100.0 | |
| d2c5wb1 | 385 | Penicillin-binding protein 1a, transpeptidase doma | 100.0 | |
| d1cs1a_ | 384 | Cystathionine gamma-synthase, CGS {Escherichia col | 100.0 | |
| d1mtyb_ | 384 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d3c0na2 | 384 | (Pro)aerolysin, pore-forming lobe {Aeromonas hydro | 100.0 | |
| d1b9ha_ | 384 | 3-amino-5-hydroxybenzoic acid synthase (AHBA synth | 100.0 | |
| d1hn0a1 | 384 | Chondroitin ABC lyase I {Proteus vulgaris [TaxId: | 100.0 | |
| d2fvka2 | 384 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 100.0 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 100.0 | |
| d1vz6a_ | 383 | Glutamate N-acetyltransferase 2 (ornithine acetylt | 100.0 | |
| d1u7ga_ | 383 | Ammonium transporter AmtB {Escherichia coli [TaxId | 100.0 | |
| d1bs0a_ | 383 | PLP-dependent acyl-CoA synthase (8-amino-7-oxonano | 100.0 | |
| d1mhyb_ | 383 | Methane monooxygenase hydrolase beta subunit {Meth | 100.0 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1imva_ | 383 | Pigment epithelium-derived factor, PEDF {Human (Ho | 100.0 | |
| d2ayna1 | 383 | Ubiquitin carboxyl-terminal hydrolase 14 {Human (H | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1u08a_ | 382 | Putative methionine aminotransferase YdbL {Escheri | 100.0 | |
| d1b5pa_ | 382 | Aspartate aminotransferase, AAT {Thermus thermophi | 100.0 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 100.0 | |
| d2bkwa1 | 382 | Alanine-glyoxylate aminotransferase {Baker's yeast | 100.0 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 100.0 | |
| d1t1ua1 | 382 | Choline O-acetyltransferase {Rat (Rattus norvegicu | 100.0 | |
| d1xl7a1 | 382 | Peroxisomal carnitine O-octanoyltransferase, COT { | 100.0 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 100.0 | |
| d3bvua3 | 381 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 | |
| d1by7a_ | 381 | Plasminogen activator inhibitor-2 {Human (Homo sap | 100.0 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 100.0 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 100.0 | |
| d1elua_ | 381 | Cystine C-S lyase C-des {Synechocystis sp. [TaxId: | 100.0 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 100.0 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 100.0 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 100.0 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 100.0 | |
| d1t6ex_ | 381 | Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu | 100.0 | |
| d1ibja_ | 380 | Cystathionine beta-lyase, CBL {Thale cress (Arabid | 100.0 | |
| d1vbga3 | 380 | Pyruvate phosphate dikinase, N-terminal domain {Ma | 100.0 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 100.0 | |
| d1q45a_ | 380 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1elja_ | 380 | D-maltodextrin-binding protein, MBP {Archaeon Pyro | 100.0 | |
| d1lj5a_ | 379 | Plasminogen activator inhibitor-1 {Human (Homo sap | 100.0 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 100.0 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 100.0 | |
| d1jr1a1 | 378 | Inosine monophosphate dehydrogenase (IMPDH) {Chine | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d1xqga_ | 378 | Maspin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 100.0 | |
| d1a59a_ | 377 | Citrate synthase {Antarctic bacterium DS2-3R [TaxI | 100.0 | |
| d1vjoa_ | 377 | Alanine-glyoxylate aminotransferase {Cyanobacteria | 100.0 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 100.0 | |
| d2d5ja1 | 377 | Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 100.0 | |
| d2i71a1 | 377 | Hypothetical protein SSO1389 {Sulfolobus solfatari | 100.0 | |
| d1jmma_ | 377 | V-region of surface antigen I/II (SA I/II, PAC) {S | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d1nm8a1 | 377 | Carnitine acetyltransferase {Human (Homo sapiens) | 100.0 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 100.0 | |
| d1mdoa_ | 376 | Aminotransferase ArnB {Salmonella typhimurium [Tax | 100.0 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 100.0 | |
| d1k9oi_ | 376 | Alaserpin (serpin 1) {Tobacco hornworm (Manduca se | 100.0 | |
| d1eg5a_ | 376 | NifS-like protein/selenocysteine lyase {Thermotoga | 100.0 | |
| d2v3qa1 | 376 | PstS-like phosphate-binding protein {Human (Homo s | 100.0 | |
| d1wu4a1 | 376 | Xylanase Y {Bacillus halodurans [TaxId: 86665]} | 100.0 | |
| d1bhea_ | 376 | Polygalacturonase {Erwinia carotovora, subsp. caro | 100.0 | |
| d2fug41 | 375 | NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus | 100.0 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 100.0 | |
| d1ih7a1 | 375 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| d1o4sa_ | 375 | Aspartate aminotransferase, AAT {Thermotoga mariti | 100.0 | |
| g1hle.1 | 375 | Elastase inhibitor {Horse (Equus caballus) [TaxId: | 100.0 | |
| d1kbla3 | 375 | Pyruvate phosphate dikinase, N-terminal domain {Cl | 100.0 | |
| d1txka2 | 374 | Glucans biosynthesis protein G (MdoG, OpgG), N-ter | 100.0 | |
| d1ioma_ | 374 | Citrate synthase {Thermus thermophilus [TaxId: 274 | 100.0 | |
| d1o69a_ | 374 | Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam | 100.0 | |
| d2a0ua1 | 374 | Initiation factor 2b {Leishmania major [TaxId: 566 | 100.0 | |
| d1nd7a_ | 374 | WW domain-containing protein 1, WWP1 {Human (Homo | 100.0 | |
| d1gwja_ | 374 | Morphinone reductase {Pseudomonas putida [TaxId: 3 | 100.0 | |
| d1rp4a_ | 374 | Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast | 100.0 | |
| d2bvca2 | 374 | Glutamine synthetase, C-terminal domain {Mycobacte | 100.0 | |
| d1so7a_ | 374 | Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1kfwa1 | 374 | Psychrophilic chitinase B {Arthrobacter sp., tad20 | 100.0 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 100.0 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 100.0 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 100.0 | |
| d1ogmx2 | 373 | Dextranase, catalytic domain {Penicillium miniolut | 100.0 | |
| d1qo0a_ | 373 | Amide receptor/negative regulator of the amidase o | 100.0 | |
| d1miqa_ | 373 | Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo | 100.0 | |
| d1m0wa2 | 373 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d1r5ya_ | 372 | Queosine tRNA-guanine transglycosylase {Zymomonas | 100.0 | |
| d1c3pa_ | 372 | HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | 100.0 | |
| d1noya_ | 372 | Exonuclease domain of family B DNA polymerases {Ba | 100.0 | |
| d1j58a_ | 372 | Oxalate decarboxylase OxdC (YvrK) {Bacillus subtil | 100.0 | |
| d1qlpa_ | 372 | Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vkpa_ | 372 | Agmatine iminohydrolase {Thale-cress (Arabidopsis | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| g1htr.1 | 372 | Pepsin(ogen) {Human (Homo sapiens), progastricsin | 100.0 | |
| d1mkfa_ | 371 | Viral chemokine binding protein m3 {Murid herpesvi | 100.0 | |
| d1r53a_ | 371 | Chorismate synthase, AroC {Baker's yeast (Saccharo | 100.0 | |
| d1to6a_ | 371 | Glycerate kinase GlxK {Neisseria meningitidis, (se | 100.0 | |
| d1aj8a_ | 371 | Citrate synthase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1c8ba_ | 371 | Germination protease {Bacillus megaterium [TaxId: | 100.0 | |
| d1n7oa1 | 371 | Hyaluronate lyase {Streptococcus pneumoniae [TaxId | 100.0 | |
| d1f1sa1 | 371 | Hyaluronate lyase {Streptococcus agalactiae [TaxId | 100.0 | |
| d1eg1a_ | 371 | Cellobiohydrolase I (cellulase, Endoglucanase I, C | 100.0 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2fnua1 | 371 | Spore coat polysaccharide biosynthesis protein C { | 100.0 | |
| d2dexx3 | 370 | Peptidylarginine deiminase Pad4, catalytic C-termi | 100.0 | |
| d2gx8a1 | 370 | Nif3-related protein BC4286 {Bacillus cereus [TaxI | 100.0 | |
| d2hgsa4 | 370 | Eukaryotic glutathione synthetase ATP-binding doma | 100.0 | |
| d1iq0a2 | 370 | Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi | 100.0 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 100.0 | |
| d3psga_ | 370 | Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 100.0 | |
| d1itua_ | 369 | Renal dipeptidase {Human (Homo sapiens) [TaxId: 96 | 100.0 | |
| d1rwha1 | 369 | Chondroitinase AC {Arthrobacter aurescens [TaxId: | 100.0 | |
| d2ewoa1 | 369 | Agmatine iminohydrolase {Streptococcus mutans [Tax | 100.0 | |
| d2heka1 | 369 | Hypothetical protein aq_1910 {Aquifex aeolicus [Ta | 100.0 | |
| g1ii8.1 | 369 | Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 100.0 | |
| g1as4.1 | 369 | Antichymotrypsin, alpha-1 {Human (Homo sapiens) [T | 100.0 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 100.0 | |
| d1laxa_ | 369 | D-maltodextrin-binding protein, MBP {Escherichia c | 100.0 | |
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d2cu0a1 | 368 | Inosine monophosphate dehydrogenase (IMPDH) {Pyroc | 100.0 | |
| d1r8ga_ | 368 | Carboxylate-amine ligase YbdK {Escherichia coli [T | 100.0 | |
| d1f52a2 | 368 | Glutamine synthetase, C-terminal domain {Salmonell | 100.0 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 | |
| d1v2da_ | 368 | Glutamine aminotransferase {Thermus thermophilus [ | 100.0 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 100.0 | |
| d1o7xa_ | 367 | Citrate synthase {Archaeon Sulfolobus solfataricus | 100.0 | |
| d1d3ga_ | 367 | Dihydroorotate dehydrogenase {Human (Homo sapiens) | 100.0 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 100.0 | |
| d1b65a_ | 367 | L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochr | 100.0 | |
| d1ue8a_ | 367 | Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 100.0 | |
| d1ursa_ | 367 | D-maltodextrin-binding protein, MBP {Alicyclobacil | 100.0 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 100.0 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 100.0 | |
| d1moqa_ | 366 | "Isomerase domain" of glucosamine 6-phosphate synt | 100.0 | |
| d1io7a_ | 366 | Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 | 100.0 | |
| d1h6za1 | 366 | Pyruvate phosphate dikinase, C-terminal domain {Tr | 100.0 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 100.0 | |
| d1jq5a_ | 366 | Glycerol dehydrogenase {Bacillus stearothermophilu | 100.0 | |
| d1u5ua_ | 366 | Allene oxide synthase-lipoxygenase protein, N-term | 100.0 | |
| d2aeua1 | 366 | Hypothetical protein MJ0158 {Archaeon Methanococcu | 100.0 | |
| d1fn9a_ | 365 | Outer capsid protein sigma 3 {Reovirus [TaxId: 108 | 100.0 | |
| d1um0a_ | 365 | Chorismate synthase, AroC {Helicobacter pylori [Ta | 100.0 | |
| d2pnwa1 | 365 | Membrane-bound lytic murein transglycosylase A, ML | 100.0 | |
| d1w85a_ | 365 | Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st | 100.0 | |
| d1u1ha2 | 365 | 5-methyltetrahydropteroyltriglutamate--homocystein | 100.0 | |
| d1zkda1 | 365 | Hypothetical protein RPA4359 {Rhodopseudomonas pal | 100.0 | |
| d1zfja1 | 365 | Inosine monophosphate dehydrogenase (IMPDH) {Strep | 100.0 | |
| d3c8ya1 | 365 | Fe-only hydrogenase, catalytic domain {Clostridium | 100.0 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 100.0 | |
| d1t64a_ | 364 | Histone deacetylase 8, HDAC8 {Human (Homo sapiens) | 100.0 | |
| d2jera1 | 364 | Agmatine iminohydrolase {Enterococcus faecalis [Ta | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1icpa_ | 364 | 12-oxophytodienoate reductase (OPR, OYE homolog) { | 100.0 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 100.0 | |
| d1kbla1 | 364 | Pyruvate phosphate dikinase, C-terminal domain {Cl | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1kq3a_ | 364 | Glycerol dehydrogenase {Thermotoga maritima [TaxId | 100.0 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 100.0 | |
| d1oc7a_ | 364 | Cellobiohydrolase II (Cel6) {Humicola insolens, Ce | 100.0 | |
| d2e7ja1 | 364 | Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl | 100.0 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 100.0 | |
| d1m7va_ | 363 | Nitric oxide (NO) synthase oxygenase domain {Bacil | 100.0 | |
| d1zaia1 | 363 | Fructose-1,6-bisphosphate aldolase {Rabbit (Orycto | 100.0 | |
| d1khba1 | 363 | Cytosolic phosphoenolpyruvate carboxykinase (GTP-h | 100.0 | |
| d1zq1a2 | 363 | Glutamyl-tRNA(Gln) amidotransferase subunit D, Gat | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d1vyra_ | 363 | Pentaerythritol tetranirate reductase {Enterobacte | 100.0 | |
| d1cnza_ | 363 | 3-isopropylmalate dehydrogenase, IPMDH {Salmonella | 100.0 | |
| d1nc5a_ | 363 | Hypothetical protein YteR {Bacillus subtilis [TaxI | 100.0 | |
| d1kwfa_ | 363 | CelA cellulase {Clostridium thermocellum [TaxId: 1 | 100.0 | |
| d2a1ha1 | 363 | Branched-chain aminoacid aminotransferase {Human ( | 100.0 | |
| d1umga_ | 362 | ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 11195 | 100.0 | |
| d1gqea_ | 362 | Polypeptide chain release factor 2 (RF2) {Escheric | 100.0 | |
| d1umda_ | 362 | Branched-chain alpha-keto acid dehydrogenase, PP m | 100.0 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 100.0 | |
| d1vlca_ | 362 | 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga | 100.0 | |
| d1pvna1 | 362 | Inosine monophosphate dehydrogenase (IMPDH) {Tritr | 100.0 | |
| d3thia_ | 362 | Thiaminase I {Paenibacillus thiaminolyticus [TaxId | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d1nqka_ | 362 | Alkanesulfonate monooxygenase SsuD {Escherichia co | 100.0 | |
| d1svma_ | 362 | Papillomavirus large T antigen helicase domain {Si | 100.0 | |
| d2gjxa1 | 362 | beta-hexosaminidase A {Human (Homo sapiens) [TaxId | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1qjwa_ | 362 | Cellobiohydrolase II (Cel6) {Trichoderma reesei, C | 100.0 | |
| d2ozla1 | 361 | E1-beta subunit of pyruvate dehydrogenase (PP modu | 100.0 | |
| d1dhsa_ | 361 | Deoxyhypusine synthase, DHS {Human (Homo sapiens) | 100.0 | |
| d1x1ia1 | 361 | Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | 100.0 | |
| d2c0ra1 | 361 | Phosphoserine aminotransferase, PSAT {Bacillus cir | 100.0 | |
| d1m32a_ | 361 | 2-aminoethylphosphonate transaminase {Salmonella t | 100.0 | |
| d1rqga2 | 361 | Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys | 100.0 | |
| d1lt7a_ | 361 | Betaine-homocysteine S-methyltransferase {Human (H | 100.0 | |
| d1d2fa_ | 361 | Modulator in mal gene expression, MalY {Escherichi | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 100.0 | |
| d1pe9a_ | 361 | Pectate lyase {Erwinia chrysanthemi, type A [TaxId | 100.0 | |
| d1qo5a_ | 360 | Fructose-1,6-bisphosphate aldolase {Human (Homo sa | 100.0 | |
| d1sq1a_ | 360 | Chorismate synthase, AroC {Campylobacter jejuni [T | 100.0 | |
| d1jdwa_ | 360 | L-arginine: glycine amidinotransferase {Human (Hom | 100.0 | |
| d1bjna_ | 360 | Phosphoserine aminotransferase, PSAT {Escherichia | 100.0 | |
| d1w23a_ | 360 | Phosphoserine aminotransferase, PSAT {Bacillus alc | 100.0 | |
| d1xfia_ | 360 | Hypothetical protein At2g17340 {Thale cress (Arabi | 100.0 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 100.0 | |
| d1oxwa_ | 360 | Patatin {Heartleaf nightshade (Solanum cardiophyll | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d4bcla_ | 359 | Bacteriochlorophyll A protein {Prosthecochloris ae | 100.0 | |
| d1goxa_ | 359 | Glycolate oxidase {Spinach (Spinacia oleracea) [Ta | 100.0 | |
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 100.0 | |
| d1yvra1 | 359 | 60-kda SS-aARo ribonucleoprotein {African clawed f | 100.0 | |
| d1w36d1 | 359 | Exodeoxyribonuclease V alpha chain (RecD) {Escheri | 100.0 | |
| d2hrca1 | 359 | Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1qcxa_ | 359 | Pectin lyase {Aspergillus niger, type B [TaxId: 50 | 100.0 | |
| d1idka_ | 359 | Pectin lyase {Aspergillus niger, type A [TaxId: 50 | 100.0 | |
| d1o2da_ | 359 | Alcohol dehydrogenase TM0920 {Thermotoga maritima | 100.0 | |
| g1lq8.1 | 358 | Protein C inhibitor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d1m7ja3 | 358 | N-acyl-D-aminoacid amidohydrolase, catalytic domai | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 100.0 | |
| d1dosa_ | 358 | Fructose-bisphosphate aldolase (FBP aldolase) {Esc | 100.0 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 100.0 | |
| d1edqa2 | 358 | Chitinase A, catalytic domain {Serratia marcescens | 100.0 | |
| d2qapa1 | 357 | Fructose-1,6-bisphosphate aldolase {Trypanosome (L | 100.0 | |
| d1taza_ | 357 | Catalytic domain of cyclic nucleotide phosphodiest | 100.0 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 100.0 | |
| d1a05a_ | 357 | 3-isopropylmalate dehydrogenase, IPMDH {Thiobacill | 100.0 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 100.0 | |
| d2amxa1 | 357 | Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI | 100.0 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 100.0 | |
| d1yyda1 | 357 | Fungal peroxidase (ligninase) {Basidomycetos fungu | 100.0 | |
| d1mppa_ | 357 | Pepsin {Mucor pusillus [TaxId: 4840]} | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d16vpa_ | 356 | Conserved core of transcriptional regulatory prote | 100.0 | |
| d1r3sa_ | 356 | Uroporphyrinogen decarboxylase, UROD {Human (Homo | 100.0 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1lbqa_ | 356 | Ferrochelatase {Baker's yeast (Saccharomyces cerev | 100.0 | |
| d1v53a1 | 356 | 3-isopropylmalate dehydrogenase, IPMDH {Bacillus c | 100.0 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 100.0 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 100.0 | |
| d2ebsa2 | 356 | Oligoxyloglucan reducing end-specific cellobiohydr | 100.0 | |
| d1vbga1 | 356 | Pyruvate phosphate dikinase, C-terminal domain {Ma | 100.0 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 100.0 | |
| d1goia2 | 356 | Chitinase B, catalytic domain {Serratia marcescens | 100.0 | |
| d1fuia2 | 355 | L-fucose isomerase, N-terminal and second domains | 100.0 | |
| d3bu7a1 | 355 | Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [ | 100.0 | |
| d1luca_ | 355 | Bacterial luciferase alpha chain, LuxA {Vibrio har | 100.0 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1iq8a1 | 355 | Archaeosine tRNA-guanine transglycosylase, N-termi | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| g1mtp.1 | 355 | Thermopin {Thermobifida fusca [TaxId: 2021]} | 100.0 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 100.0 |
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=31717.96 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~w~~~~~~~~~~~~~viYe~~~~~f~~~Gd~~g~~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G 80 (420)
T d2bhua3 1 TFDWTDADWHGIKLADCVFYEVHVGTFTPEGTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYG 80 (420)
T ss_dssp SSCCCCTTCCCCCGGGCCEEEECHHHHSSSCSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 96899989798884224899996002188999999998679999769998995998768888998888566888685659
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVD 160 (420)
T d2bhua3 81 RPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD 160 (420)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCC
T ss_conf 99999999999974054534465535667777633334443334554322345545368699999988764032014653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 GfR~D~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
T d2bhua3 161 GLRLDATPYMTDDSETHILTELAQEIHELGGTHLLLAEDHRNLPDLVTVNHLDGIWTDDFHHETRVTLTGEQEGYYAGYR 240 (420)
T ss_dssp EEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCEEEEECSSCCTHHHHTTCCSEEECTHHHHHHHHHHHCCCSGGGGGCC
T ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 78873333202122310079998888764687425620357753121001125422323210444301334445312330
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~nHD~~~~~~~~~r~~~~~~~~~~~~k~a~~~ll 320 (420)
T d2bhua3 241 GGAEALAYTIRRGWRYEGQFWAVKGEEHERGHPSDALEAPNFVYCIQNHDQIGNRPLGERLHQSDGVTLHEYRGAAALLL 320 (420)
T ss_dssp CSHHHHHHHHHHSSSCEEEEECCTTCCEEEECCCTTCCGGGEEEESCCHHHHHTSTTCCCGGGSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHCHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 26678999985144446520443153554126433455213034321566323553112356643565999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 t~pG~P~iy~GdEig~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 400 (420)
T d2bhua3 321 TLPMTPLLFQGQEWAASTPFQFFSDHAGELGQAVSEGRKKEFGGFSGFSGEDVPDPQAEQTFLNSKLNWAEREGGEHART 400 (420)
T ss_dssp HSSSEEEEETTGGGTCSSCCCCCCCCCHHHHHHHHHHHHHHC---------CCCCTTSHHHHHTTSCCSGGGGSHHHHHH
T ss_pred HCCCCCEEECCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH
T ss_conf 48998798577511789986323456402203544466311367776665557886555544456678788623476899
Q ss_pred -------------------C
Q ss_conf -------------------8
Q 001738 683 -------------------V 683 (1019)
Q Consensus 683 -------------------~ 683 (1019)
.
T Consensus 401 ~~~yr~Li~lRk~~p~l~~~ 420 (420)
T d2bhua3 401 LRLYRDLLRLRREDPVLHNR 420 (420)
T ss_dssp HHHHHHHHHHHHHCTTTTCC
T ss_pred HHHHHHHHHHHHCCHHHHCC
T ss_conf 99999999999568987575
|
| >d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IF3-like superfamily: EPT/RTPC-like family: Enolpyruvate transferase, EPT domain: UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=31647.72 Aligned_cols=1 Identities=0% Similarity=-1.090 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 M~~~~i~g~~~L~G~V~ipgsKS~s~Rali~aaLa~g~s~I~n~l~s~D~~~~~~al~~LG~~I~~~~~~~I~~~~~~~~ 80 (419)
T d1ejda_ 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERDGSVWIDASNVNNF 80 (419)
T ss_dssp CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESSSEEEECTTCCCC
T ss_pred CCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCC
T ss_conf 98699948890477997888389999999999984998999259901999999999997799899898799989997777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~t~~~~~~~~a~~~~~~~~l~Gd~sL~~RPm~~li~~L~~lGa~i~~~~g~~~~~i~g~l~g~~~~~~~ 160 (419)
T d1ejda_ 81 SAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDK 160 (419)
T ss_dssp EECHHHHTTCGGGGGGHHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEETTEEEEECSSSCBCCEEECSS
T ss_pred CCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCEEECCC
T ss_conf 66554540354320024425665277524666643457774267889998536169962892445337886674674587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Ssq~~s~llla~~~~~g~~~i~~~~~~~~i~~t~~~l~~~G~~i~~~~~~~~~i~g~~~~~~~~~~V~~D~ssAa~~~~ 240 (419)
T d1ejda_ 161 VSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLV 240 (419)
T ss_dssp CCHHHHHHHHHHHTTSBSEEEEETCCCCHHHHHHHHHHHHTTCEEECTTSSEEEEECCSCBCCEEEECCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHH
T ss_conf 62567788984455237963542024441566677776522010011795499980542346774053570664311333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 aa~i~g~~i~i~~~~~~~~~~~~~~l~~mg~~i~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 320 (419)
T d1ejda_ 241 AAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGT 320 (419)
T ss_dssp HHHTTTCEEEEESCCGGGCHHHHHHHHHTTCEEEECSSEEEEECTTCCCBCCCEECCSTTSCCGGGHHHHHHHHHTSBSE
T ss_pred HHCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCC
T ss_conf 22156865521677806778898876642313997377699997676544300256632234421145541222187361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~ke~dr~~~~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~DHRiAMa~aia~l~~~g~~~I~~~~~i~~SyP 400 (419)
T d1ejda_ 321 GVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYE 400 (419)
T ss_dssp EEEECCSCSSCCTHHHHHHHTTCEEEEETTEEEEECCSCCBCCEECCSSHHHHHHHHHHHHHSBEEEEECCTHHHHHHSS
T ss_pred EEEEEECCCHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEECCCEEEECCCH
T ss_conf 67764023438789999996889799969999997999863761613838999999999981999499836137868734
Q ss_pred ------------------C
Q ss_conf ------------------8
Q 001738 683 ------------------V 683 (1019)
Q Consensus 683 ------------------~ 683 (1019)
.
T Consensus 401 ~F~~~l~~LGa~I~~~~~~ 419 (419)
T d1ejda_ 401 RIEDKLRALGANIERVKGE 419 (419)
T ss_dssp SHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEECCC
T ss_conf 0999999679899997179
|
| >d2df7a1 b.121.4.9 (A:11-429) Birnavirus VP2 {Infectious bursal disease virus [TaxId: 10995]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: Positive stranded ssRNA viruses family: Birnaviridae-like VP domain: Birnavirus VP2 species: Infectious bursal disease virus [TaxId: 10995]
Probab=100.00 E-value=0 Score=31654.99 Aligned_cols=1 Identities=100% Similarity=0.537 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~ylksll~PetgpasIPDD~~~rH~l~~etstyNL~~~~sGsGllv~fp~~P~s~vGaHY~~~~~~~l~FDq~l~TsQ 80 (419)
T d2df7a1 1 IVPFIRSLLMPTTGPASIPDDTLEKHTLRSETSTYNLTVGDTGSGLIVFFPGFPGSIVGAHYTLQSNGNYKFDQMLLTAQ 80 (419)
T ss_dssp CCHHHHHHHCGGGCCCCCCSSCCCCBEEEEEEEEEEEECCTTSCEEEEECTTCSSSEEEEEEEECTTSCEEEEEEEECSS
T ss_pred CCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHHHHH
T ss_conf 91465554285678878971788877542033045369726885699991799875210278972788576465556667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 dLkk~~nYgRliSr~~~i~SstLPaGvYAlnGT~Na~tf~GslSEv~~~sYn~lmS~ttN~~DKv~NvLV~~GVtVLsLP 160 (419)
T d2df7a1 81 NLPASYNYCRLVSRSLTVRSSTLPGGVYALNGTINAVTFQGSLSELTDVSYNGLMSATANINDKIGNVLVGEGVTVLSLP 160 (419)
T ss_dssp CGGGTEEEEEEEEEEEEEEECCCCTTCCBCCCEEEEEEESSCGGGCSCCSTTGGGGSCSCGGGEEEEEETTTCEEEECCC
T ss_pred HHHHHHCHHHHHCEEEEEEECCCCCEEEEECCEEEEEEEECCHHHHHCCCHHHHEECCCCHHHHHCCEEECCCEEEEECC
T ss_conf 66766333321002466651357743455246154589824667600246101002126802530789823864999757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 TgfD~pYVRLgDetP~~gl~p~~~a~ct~a~~PR~Y~I~~a~~yq~~sq~q~gGtt~Tlfs~NiDavtSlsVtGdivFq~ 240 (419)
T d2df7a1 161 TSYDLGYVRLGDPIPAIGLDPKMVATCDSSDRPRVYTITAADDYQFSSQYQSGGVTITLFSANIDAITSLSIGGELVFHT 240 (419)
T ss_dssp SCSSCCCEECCEECCCCCSCTTCCCEECCCSSCEEEEEEEEEEEEEEEECCTTCEEEEEEEEEEEESSCEEEEEEEEEEC
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEE
T ss_conf 66788735647888765778765430365568733575367545547755678688898750001104267400699972
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~dati~~IG~DGt~vi~~avas~nGlt~G~dn~~pfnlviPT~eITqPITsIKLeivt~k~gg~ag~~~s~~~~ 320 (419)
T d2df7a1 241 SVHGLALDATIYLIGFDGTTVITRAVASDNGLTTGIDNLMPFNLVIPTNEITQPITSIKLEIVTSKSGGQAGDQMSWSAS 320 (419)
T ss_dssp SSSSEEEEEEEEEEETTSCEEEEEEEEEEEECCTTSCEEEEEEEEECGGGCCSCEEEEEEEEEEEETTCCTTCEEEEEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 36651873799996326974788899706765356355443103236776775512789999952136754753222456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 gs~svT~~gGN~PGvLRPvTlVAYE~vapgsilTVaGVSNyELIPNPeL~KN~~t~yG~~dP~~l~y~K~iLs~Re~L~i 400 (419)
T d2df7a1 321 GSLAVTIHGGNYPGALRPVTLVAYERVATGSVVTVAGVSNFELIPNPELAKNLVTEYGRFDPGAMNYTKLILSERERLGI 400 (419)
T ss_dssp EEEEEEETTTTSTTSSCCEEEEEEESCCTTCEEEEEEEEEEEEEECHHHHTTCCCBCCCCCTTHHHHHHHHHHTHHHHTC
T ss_pred CCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEECCCHHHHHCCCCCCCCCCHHHCCHHHHHHCCHHHCCC
T ss_conf 64699965887778768658999840257746999602451324897897406332356583434288777434311486
Q ss_pred ------------------C
Q ss_conf ------------------8
Q 001738 683 ------------------V 683 (1019)
Q Consensus 683 ------------------~ 683 (1019)
.
T Consensus 401 rtvw~~~~Y~~~~~~f~e~ 419 (419)
T d2df7a1 401 KTVWPTREYTDFREYFMEV 419 (419)
T ss_dssp CSEEEHHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHCC
T ss_conf 3660277878999887439
|
| >d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=31580.42 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~p~~~~~~p~~~~~~e~ll~~A~~Fi~qyy~e~~~~~~~~~~ 80 (418)
T d1om4a_ 1 RFLKVKNWETDVVLTDTLHLKSTLETGCTEHICMGSIMLPSQHTRKPEDVRTKDQLFPLAKEFLDQYYSSIKRFGSKAHM 80 (418)
T ss_dssp CCEEEEBTTTCCEEEECGGGGCCSCCSCCSSCBCTTCSCC-----------CHHHHHHHHHHHHHHHHHHTTCTTSHHHH
T ss_pred CCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 95245540478756320434167889987564366222453457888889987899999999999999863435868999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Rl~ev~~eI~~tGtY~~T~~EL~~GAk~AWRNs~RCIGRi~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~Ir~~ 160 (418)
T d1om4a_ 81 DRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSA 160 (418)
T ss_dssp HHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSCCCE
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 99999999997455620899999887899870454233500116571565678999899999999999997079987623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ITVFpp~~~~~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLviq~~g~~p~~feiP~ 240 (418)
T d1om4a_ 161 ITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKAPRGRFDVLPLLLQANGNDPELFQIPP 240 (418)
T ss_dssp EEECCCCSSSSSCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHTTTCCCCCCTTCBCCEEEECTTCCCEEECCCG
T ss_pred EEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEECCH
T ss_conf 89737988899986565488886626568998764783137999999976898999987702089997899972574887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRNl~D~~RYN~L~~VA~~mGLDT 320 (418)
T d1om4a_ 241 ELVLEVPIRHPKFDWFKDLGLKWYGLPAVSNMLLEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMDLDM 320 (418)
T ss_dssp GGCCEEECCCSSCTTGGGGCCEEESCCCBCSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHHTCCC
T ss_pred HHEEEECCCCCCCHHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 78246435598975477559837625011365232088855346745341123365415667565664899999849788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~Sgs~tpvfH~~~~n~ 400 (418)
T d1om4a_ 321 RKTSSLWKDQALVEINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNY 400 (418)
T ss_dssp SCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCCCCHHHHSCSSSGGGSGGGGBCCCBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHCC
T ss_conf 99740577889999999999899887964805278999999999999981899998852777888653441677765353
Q ss_pred -----------------C
Q ss_conf -----------------8
Q 001738 683 -----------------V 683 (1019)
Q Consensus 683 -----------------~ 683 (1019)
.
T Consensus 401 ~l~P~f~yq~~~w~th~w 418 (418)
T d1om4a_ 401 RLTPSFEYQPDPWNTHVW 418 (418)
T ss_dssp CCSSEEECCCCGGGTCCC
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 147886557986446789
|
| >d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: IlvD/EDD N-terminal domain-like superfamily: IlvD/EDD N-terminal domain-like family: lvD/EDD N-terminal domain-like domain: 6-phosphogluconate dehydratase EDD species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=31573.35 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~i~~vt~rI~~RS~~~r~~Yl~~i~~~~~~~~~r~~l~c~nlAh~~aa~~~~dk~~l~d~~kP~IGIvns~~d~~pc 80 (418)
T d2gp4a2 1 MHSVVQSVTDRIIARSKASREAYLAALNDARNHGVHRSSLSCGNLAHGFAACNPDDKNALRQLTKANIGIITAFNDMLSA 80 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97179999999999708779999999999875488711135521777887068302556763179969998352346464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 h~hl~~l~~~vK~gv~~~gg~~~~~~~~p~~cDGit~G~~GM~~SL~SRelIA~siE~~~~~~~~Dg~V~l~~CDK~vPG 160 (418)
T d2gp4a2 81 HQPYETYPDLLKKACQEVGSVAQVAGGVPAMCDGVTQGQPGMELSLLSREVIAMATAVGLSHNMFDGALLLGICDKIVPG 160 (418)
T ss_dssp ---------CCC---CCCCEEEEECC-BC--CCCCCCSSSGGGGHHHHHHHHHHHHHHHHTTCCCSEEEEECCSTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH
T ss_conf 24299999999999997178663567645534651378653013130022789899998624765617997338998768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~lMaa~r~n~lPsI~v~gGpm~~G~~~~~~~~~~~~~~~G~i~~~el~~~E~~a~p~~GtC~~mgTANTm~~l~EalGl~ 240 (418)
T d2gp4a2 161 LLIGALSFGHLPMLFVPAGPMKSGIPNKEKARIRQQFAQGKVDRAQLLEAEAQSYHSAGTCTFYGTANSNQLMLEVMGLQ 240 (418)
T ss_dssp HHHHHHTTTTSCEEECCCCC-------------------CCTHHHHHHHTTSSCHHHHHHHHHCC-----CHHHHHTTCS
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999843678779971577689746777725753032233569999999874668878663267798999999971567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 LPGsa~vpa~~~~r~~~a~~ag~~~~~~~~~~~~~~~~~dIlt~~a~~NAi~~~~A~GGSTNavlHL~AIA~eaGi~l~l 320 (418)
T d2gp4a2 241 LPGSSFVNPDDPLREALNKMAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGSTNLTMHIVAAARAAGIIVNW 320 (418)
T ss_dssp CTTGGGSCTTCHHHHHHHHHHHHHHHHTSTTSSSCCCHHHHSSHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHTTCCCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCH
T ss_conf 52124788861899999998999999999851267897786199999711168760562675320629999654898989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~dfd~is~~~P~L~~l~P~G~~~m~d~~~AGGvp~v~k~L~~~glLh~D~~TVtG~tl~e~l~~~~~~~~~i~~~~~p~~ 400 (418)
T d2gp4a2 321 DDFSELSDAVPLLARVYPNGHADINHFHAAGGMAFLIKELLDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTV 400 (418)
T ss_dssp HHHHHHHTTCCBCBCCGGGSSCCHHHHHHHTHHHHHHHHHHHHTCSCCCCEETTEECGGGGGEEEEEETTEEEEEECCSS
T ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCC
T ss_conf 99999857888544441598621889876069999999998788856999883886799997077766774000468777
Q ss_pred -----------------C
Q ss_conf -----------------8
Q 001738 683 -----------------V 683 (1019)
Q Consensus 683 -----------------~ 683 (1019)
.
T Consensus 401 ~~d~~VIrp~~~P~~~~G 418 (418)
T d2gp4a2 401 SLDTEVLTSVATPFQNNG 418 (418)
T ss_dssp CSCTTTBCCSSSCSBSSC
T ss_pred CCCCCEECCCCCCCCCCC
T ss_conf 899887576555779999
|
| >d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=31570.39 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~~~~w~~~pRw~~i~r~yta~dv~~lrgs~~~~~~~a~~~a~~Lr~lL~~~~~v~~~Ga~d~~~A~~~ 80 (418)
T d1f61a_ 1 ASVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQ 80 (418)
T ss_dssp CCCTTCCCCHHHHHHHHHHCGGGTTCCCSSCHHHHHHTSTTCCCCCHHHHHHHHHHHHHHHHSSCEEEEBCCSHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHH
T ss_conf 98456504599999998629882778799899999986688775425789999999999836997884144778999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~kaGf~aiY~SG~~vaa~~s~s~~g~PD~gl~~~~ev~~~v~~I~~~~~~~d~~~~~~~~~~~~~~~~PIIaDaDtGfG~ 160 (418)
T d1f61a_ 81 VRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGG 160 (418)
T ss_dssp HHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTCSSS
T ss_pred HHHCCCEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
T ss_conf 98199889854276523454556886665555167899999999988788999998740466433567768753333453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~nv~rtvk~~i~AGaAgihiEDQ~~~~KkCGH~~GK~lvp~~e~~~ki~Aa~~a~d~~~~~~~iiARTDA~~a~~i~s~ 240 (418)
T d1f61a_ 161 ALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSD 240 (418)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCS
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCC
T ss_conf 78999999999983786899734677776556667766688999999999998766437998489997160232355333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~d~~D~~~i~g~rt~eG~y~~~~g~e~AI~Ra~aya~~gd~i~~e~~~~~~ee~~~f~~~v~~~~~~~~l~~~~sPsf~w 320 (418)
T d1f61a_ 241 VDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNW 320 (418)
T ss_dssp CSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCSSSCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC
T ss_conf 43233444455457664001457789999999963543671885057899999999986248873332035676567770
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~~eL~~~Gy~~~~i~la~~~a~~~a~~~la~~~~~~Gm~ay~elQ~re~~~~~~Gy~~~khQ~~vG~~ 400 (418)
T d1f61a_ 321 KKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGAG 400 (418)
T ss_dssp HHHSCHHHHHHHHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCCTTSHHHHTTHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
T ss_conf 11467766543399999609629996138999999999999999986676277877658888874698556401330532
Q ss_pred -----------------C
Q ss_conf -----------------8
Q 001738 683 -----------------V 683 (1019)
Q Consensus 683 -----------------~ 683 (1019)
.
T Consensus 401 y~D~~~~~~~~~~s~~a~ 418 (418)
T d1f61a_ 401 YFDRIATTVDPNSSTTAL 418 (418)
T ss_dssp HHHHHHHHHCTTSCCCCC
T ss_pred HHHHHHHHHCCCHHHHCC
T ss_conf 788889884787053139
|
| >d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]
Probab=100.00 E-value=0 Score=31566.36 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~ 80 (418)
T d2r5ea1 1 KFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYS 80 (418)
T ss_dssp CCCCCGGGTTCCCCHHHHHHHHHHHHCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98643464179988999999986589988716889999889999999999983899667678998788999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (418)
T d2r5ea1 81 QLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLD 160 (418)
T ss_dssp HHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECC
T ss_pred HHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf 98599999641589917973321100222013333200122345004678987498699997214556663055666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~ 240 (418)
T d2r5ea1 161 NNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 88776654114441241786865443331888777753442178122102102120157876531003655543145665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d2r5ea1 241 SAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASF 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57754268876445323431133444211222333345620210122233222334453256788888988764667766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~ 400 (418)
T d2r5ea1 321 LAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK 400 (418)
T ss_dssp HHHTTCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECCC
T ss_conf 76428701379812499787223565111012034467899999999878999968256478877667899899995699
Q ss_pred -----------------C
Q ss_conf -----------------8
Q 001738 683 -----------------V 683 (1019)
Q Consensus 683 -----------------~ 683 (1019)
.
T Consensus 401 ~e~l~~a~~rl~~~lg~~ 418 (418)
T d2r5ea1 401 DENLQKAAEILRKWKGSS 418 (418)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999987359
|
| >d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Kynurenine--oxoglutarate transaminase I species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31564.68 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~r~~~~~~~~~~~~~~~~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~ 80 (418)
T d1w7la_ 1 QLQARRLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 80 (418)
T ss_dssp CCSCGGGTTCCCCTHHHHHHHHHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97670002799899999999747899788889889998899999999999857974468899867899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d 160 (418)
T d1w7la_ 81 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLD 160 (418)
T ss_dssp HTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECC
T ss_pred HCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 58998810115642585799999998622677615304556600689999749874014566542223443224575300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~ 240 (418)
T d1w7la_ 161 PMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIG 240 (418)
T ss_dssp HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEE
T ss_pred HHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEC
T ss_conf 55430223566531112676776564333889999999998629871155666775158989989777165445552001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 S~SK~~~~pG~RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 320 (418)
T d1w7la_ 241 SAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRS 320 (418)
T ss_dssp EHHHHTTCGGGCCEEEECCHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 56764268877434322320255553023322322232025677887765222333344332223102333200012345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 L~~~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~ 400 (418)
T d1w7la_ 321 LQSVGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK 400 (418)
T ss_dssp HHTTTCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC
T ss_pred HHHCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCEEEEEECC
T ss_conf 66438812379820499887710002320101345553589999999997999997454426787667779979999738
Q ss_pred -----------------C
Q ss_conf -----------------8
Q 001738 683 -----------------V 683 (1019)
Q Consensus 683 -----------------~ 683 (1019)
.
T Consensus 401 ~~~~l~~a~~rl~~~~~~ 418 (418)
T d1w7la_ 401 DEATLQAMDEKLRKWKVE 418 (418)
T ss_dssp CHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHCC
T ss_conf 999999999999998667
|
| >d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MFS general substrate transporter superfamily: MFS general substrate transporter family: LacY-like proton/sugar symporter domain: Lactose permease species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31500.39 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~ 80 (417)
T d1pv7a_ 1 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWII 80 (417)
T ss_dssp CHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 98665715899999999999999999999999999802999999999999999999999999999999817539999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (417)
T d1pv7a_ 81 TGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGI 160 (417)
T ss_dssp HHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99999999988763014678889999877650122233202211222344113456777788765403554455300012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (417)
T d1pv7a_ 161 MFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD 240 (417)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 33456653211003489999999999842332102322002320233222211001222222110246688999887641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T d1pv7a_ 241 QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKT 320 (417)
T ss_dssp HHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 22222222223333210000011222223322221024444200122210003657888886520113322111457899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l 400 (417)
T d1pv7a_ 321 LHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTL 400 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998798489999999999999999999999999999997989999999999999999999753
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~r~~~~e~a 417 (417)
T d1pv7a_ 401 SGPGPLSLLRRQVNEVA 417 (417)
T ss_dssp CCSSCTTHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHCCCC
T ss_conf 27785436675323379
|
| >d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Amine oxidase catalytic domain family: Amine oxidase catalytic domain domain: Copper amine oxidase, domain 3 species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31496.12 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 P~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r~r~i~Y~lsl~E~~vpY~~~~p~~ 80 (417)
T d1w6ga1 1 PLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIR 80 (417)
T ss_dssp SCCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred CCCCCCCCCEEECCCCCCEEECCCCEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEECCEEEEEECCCCCCHH
T ss_conf 98888998305689999879778988997687899970787661999999818984766899801236798788998356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L 160 (417)
T d1w6ga1 81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM 160 (417)
T ss_dssp TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred HHCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCEEEEEEECCCCEEEEEEEEE
T ss_conf 21016733452633412346558999866768237872688998861653788624788227888704781368750069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG~~Nsv~ 240 (417)
T d1w6ga1 161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVE 240 (417)
T ss_dssp EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTTCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEE
T ss_pred EEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCCEEE
T ss_conf 99999973202089999994696799999988999871347888986437646756555321357774355479976699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~~s~~~ 320 (417)
T d1w6ga1 241 EEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIA 320 (417)
T ss_dssp EEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHH
T ss_pred EEEEEEECCCCCCCCCCEEEEEEEEEEEHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHH
T ss_conf 99617842797665454789999988762563220266686489998799858899944599855887764579876011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~gf~L 400 (417)
T d1w6ga1 321 RRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKL 400 (417)
T ss_dssp HHTGGGGSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEE
T ss_pred HCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEEE
T ss_conf 02322106378856877662677777447789998467510899423786799995784248985447997620577999
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
+
T Consensus 401 ~P~nFF~~nPald~p~s 417 (417)
T d1w6ga1 401 RPEGFFDRSPVLDVPAN 417 (417)
T ss_dssp EESSCSSSCTTTTCCCC
T ss_pred ECCCCCCCCCCCCCCCC
T ss_conf 87877899986678999
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31496.10 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~PL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~ 80 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK 80 (417)
T ss_dssp CCCTTTTCEEEECCCTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHH
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHH
T ss_conf 99898999899847704899999999983993999898999871210488898985188897089984999769398899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~Li~~aDv~i~n~~pg~~~rlGl~~~~l~~~nP~lI~~sisgfG~~GP~~~~~~~D~~~qA~sG~~~~~g~~~~~P 160 (417)
T d1q7ea_ 81 EVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP 160 (417)
T ss_dssp HHHHHHHHHCSEEEECCCC-------CCHHHHHHHCTTCEEEEEESSCTTSTTTTSCCCHHHHHHHTTHHHHSSCTTSCC
T ss_pred HHHHHHHHCCCCCEECCCCCCHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999984086407546887175528889999866878788763222454344565334543333223201126656798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~D~~~g~~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (417)
T d1q7ea_ 161 LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP 240 (417)
T ss_dssp CCCSSCTTTHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEHHHHHHHHTHHHHHHHHHHHHHSCCTTSTTTTTSCCCSSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 52224431679999999999999999985499739997789999986689998554320002222244344655677788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 r~~~~~~~~~p~~~~~~~~~~t~dg~i~~~~~~~~~w~~l~~~lg~~dl~~d~~~~~~~~r~~~~~~l~~~i~~~~~~~t 320 (417)
T d1q7ea_ 241 RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTID 320 (417)
T ss_dssp CCTTCCSSSSCEEEEECTTTTTCTTCEEEEECCGGGHHHHHHHTTCGGGGTCTTTSSHHHHGGGHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66656888886430133015517983999732312556899985885101332000000122119999877765211333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~e~~~~l~~~~ip~~pV~~~~e~~~dpq~~~r~~~~~~~~p~~g~~~~~g~p~~~s~~~~~~~~aP~lGeht~eIL~el 400 (417)
T d1q7ea_ 321 KHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQEL 400 (417)
T ss_dssp HHHHHHHHGGGTCCEEECCCHHHHHHCHHHHHTTSEEEEEETTTEEEEEECCSSCCSSCCCCCCCCCCTTTTHHHHHHHT
T ss_pred CCHHEEEEECCCEEEEECCCHHHHHHCHHHHHCCCEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 10110123237702674488999976989897299999666998823644788604899999999999984599999986
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
.
T Consensus 401 G~s~~~I~~L~~~gvI~ 417 (417)
T d1q7ea_ 401 GYSDDEIAAMKQNHAIE 417 (417)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHCCCCC
T ss_conf 99999999999781939
|
| >d3bona1 d.92.1.7 (A:3-419) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype A [TaxId: 1491]
Probab=100.00 E-value=0 Score=31495.50 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~nnnFNyndPVnn~~Ily~~~p~~~~~~~~KAF~I~~nIWIiPER~~~~~~~~~d~~~p~~~~~~~~~yYDpnyLsTD~ 80 (417)
T d3bona1 1 FVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDN 80 (417)
T ss_dssp CCSCCCCTTSCCCSSSEEEEECC--CCCCCEEEEEEETTEEEEEEECCSSCTTCCSCSCC----CCSSCCCCTTTTCSHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCCCH
T ss_conf 96677777898899718999567788776034477426768830343567888666689701025876412753245613
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 EKD~FLk~~IKLf~RINsn~~G~~LL~~I~~aiPflG~s~~~~~~~~~~~~svni~~~~g~~~~~~~NlvIfGPgpnI~e 160 (417)
T d3bona1 81 EKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQ 160 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHCCCCCBCCSSTTEEBCCGGGEEEEECTTSCEEEEECSEEEEECCSSTTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEECCCCCCCC
T ss_conf 78899999999999854857899999999726877789988711256641157764489854554215899889863145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 n~~~~~~~~~~n~s~~GfGsi~~i~FsPe~~~~f~~~~~~~~~~~~~~~~F~~DPAl~L~heLIhsLh~LYGik~~~~~~ 240 (417)
T d3bona1 161 FECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRV 240 (417)
T ss_dssp CEEECCCCSSCCTTTSSCCCCEEEECCTTEEEEECSSHHHHTCTTSCCCCEECCHHHHHHHHHHHHHHHHTTCCCCTTCE
T ss_pred CCCEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 54323034457733047650589997764377604533455555545343542889999999999988760756788741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~i~~eEl~tFGG~D~~iI~~~~~~~~~~k~l~~yk~Ia~rl~kvn~~~~~~~~l~~yK~~F~~KY~ 320 (417)
T d3bona1 241 FKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYL 320 (417)
T ss_dssp EECCSCHHHHHTTCEEEHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHCCEESSSSSCHHHHHHHHHHHHT
T ss_pred EECCCCCHHHHCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 32121122343246645777765169781105846788899999999999999987525678885236999999988744
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 l~~d~~g~~~vn~~kF~~~yk~L~~~fTe~~~a~~fkvk~Rk~Y~~~~~~~~~~nlldd~iYtI~eGFNi~~~nl~~~~~ 400 (417)
T d3bona1 321 LSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFN 400 (417)
T ss_dssp CEECTTCCEECCHHHHHHHHHHHHHTSCHHHHHHHHTCCCCSCSSSCCCEEEECCCSSTTTCBTTTBTSCTTSTTSSTTG
T ss_pred CCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCCEECCCCCCCCCCCCCCCCC
T ss_conf 65278885895389999999999711588888766501434420000244100144676531314552146665345557
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
-
T Consensus 401 GQN~~iN~~~~~~~~~~ 417 (417)
T d3bona1 401 GQNTEINNMNFTKLKNF 417 (417)
T ss_dssp GGBTTTTGGGCEEEEEC
T ss_pred CCCHHHCHHHHHHHCCC
T ss_conf 76522153442442069
|
| >d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Clavaminate synthase-like family: YbiU-like domain: Hypothetical protein YbiU species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31494.43 Aligned_cols=1 Identities=0% Similarity=1.533 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~p~dl~~~i~~~K~~Lr~~~~~~~~~f~~l~~~i~~ev~eI~~l~~~G~~iIPeI~F~dI~~~~~~~~~~~~I 80 (417)
T d2csga1 1 TPFTHETLPADPKAAIRQMKQALRAQIGDVQAVFDRLSATIAARVAEINDLKAQGQPVWPIIPFSELAMGNISDATRAEV 80 (417)
T ss_dssp CTTCCSSCCSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCBCCHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCCCHHHHHHH
T ss_conf 99876678898389999999999965678999999999999999999999996199985065589952678998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 krrG~vVIRnV~p~e~a~~w~~~l~~Yle~n~~~~~~~~~~d~~f~~lp~~~pqiy~lyws~~q~~aR~~p~~~~~~~~l 160 (417)
T d2csga1 81 KRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIYPVYWSQAQMQARQSEEMALAQSFL 160 (417)
T ss_dssp HHHSEEEETTSSCHHHHHHHHHHHHHHHHHTTHHHHCCCCCCCTTTTSSSCCCSSCCCCCBHHHHHHHHCHHHHHHHHHH
T ss_pred HHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCHHHHHHHHHH
T ss_conf 86188998887899999999999999998286420036864310012355677744242689999874495899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~lw~~~~~~~~~~~~~~~l~y~DR~r~r~Pg~~~~~l~pH~D~Gs~erW~d~~y~~~y~~if~g~we~ydPw~~~~R~~ 240 (417)
T d2csga1 161 NRLWQVEHDGKRWFNPDISIIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFASVFNGNVEQYDPWNAAHRTD 240 (417)
T ss_dssp HTTSBCCSSSSCSSEEEEECCCCCCEECCCTTCCBCCEEEEECSCSTHHHHCHHHHHHTHHHHTSCGGGCCTTBCTTGGG
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 85202368866412577743045503137999876786755689850103563125688887558842279876423320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~l~~~~~~cs~FR~fQGwlaLs~~~p~dGtL~v~P~~~~~ay~llrpf~~d~~~~~~~g~~pg~~~~~~~~~h~~l~ 320 (417)
T d2csga1 241 VEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYILLRPLLDDVPEDELCGVAPGRVLPISEQWHPLLM 320 (417)
T ss_dssp CCCCCCTTCCCCCSCCSEEEEEESSCBCTTSSCEEECCCGGGHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHH
T ss_pred CHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 00034478765414778887752366788887379963403577887240125556655677776655545633315650
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~v~ip~~~pGD~V~Wh~d~iH~v~~~~~g~~~s~V~Yi~~~P~~~~N~~yl~~qr~aF~~g~~ppdFp~~~~E~~~~g 400 (417)
T d2csga1 321 AALTSIPPLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYARKVKAALETGASPGDFPREDYETTWEG 400 (417)
T ss_dssp TTCEECCCBCTTCEEEEETTCCEEECCBSSCSSCCCEEECCBCEESHHHHHHHHHHHHHHHHTCCCTTSCSCCGGGSCSS
T ss_pred CCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 86155245688887887078753446678999865389842788846559999999999975999877789987543356
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
.
T Consensus 401 r~~~~~ls~~G~r~mGL 417 (417)
T d2csga1 401 RFTLRDLNIHGKRALGI 417 (417)
T ss_dssp BCCGGGCCHHHHHHTTC
T ss_pred CCCHHHCCHHHHHHCCC
T ss_conf 88946528999986289
|
| >d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=31492.91 Aligned_cols=1 Identities=0% Similarity=-0.793 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~n~~ti~d~~d~~gK~VllRvD~NvPi~~g~i~dd~RI~~~~pTI~~l~~~~a~kvil~sH~GRP~g~~~~~~SL~ 80 (417)
T d1ltka_ 1 HHHLGNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLK 80 (417)
T ss_dssp CCCSSSCCBSSSCCCCTTCEEEEEECCCCCEETTEESCTHHHHHTHHHHHHHHTTCCSEEEEECCCSCCTTSCCGGGCSH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHH
T ss_conf 97444675023111258998999943477654993896889999999999999879985999847999999889875879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~IlLLENvRF~~eE~~~~~~~~~~~~~~~~~n~~~f~k~LA~laD 160 (417)
T d1ltka_ 81 PVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLAD 160 (417)
T ss_dssp HHHHHHHHHHTSCCEECSCSSSHHHHHHHHSSCTTEEEECCCGGGSHHHHSEEECTTCCEEECCHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999868465556553202245430247865378740021021012356432221000122307999999860385
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 vyVNDAF~~aHR~haS~vgi~~~~~~aG~L~ekEl~~L~~~l~~~~kP~vaIlGGaKvsdKi~vi~~L~~k~D~iiigG~ 240 (417)
T d1ltka_ 161 VFINDAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGG 240 (417)
T ss_dssp EEEEECTTSCSSCCHHHHCCCCSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSGGGHHHHHHHHTTCSEEEEESS
T ss_pred EEEECCHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEEEHH
T ss_conf 89963531231047632312120112368999999999999854566736998567744269999878865111663036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 mantfL~~a~g~~ig~sl~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~ 320 (417)
T d1ltka_ 241 MAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPK 320 (417)
T ss_dssp HHHHHHHHHHCCCCTTSCCCTTGGGTHHHHHHHHHHTTCEEECCSEEEEESSSSSSSCEEEEETTTCCCTTCEEEEECHH
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCH
T ss_conf 67889886148766753103567899999999998639961002322430234567643312333567753444411511
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 Ti~~~~~~I~~aktI~WNGP~GvfE~~~F~~GT~~l~~~i~~~t~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~ 400 (417)
T d1ltka_ 321 SIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGAS 400 (417)
T ss_dssp HHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECCSTTHHHHHHHTCGGGSSEECCCSHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHH
T ss_conf 12679998646877999898344446624278999999999883179979995789999999639746880897578999
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
.
T Consensus 401 Le~L~G~~LPgieaL~~ 417 (417)
T d1ltka_ 401 LELLEGKELPGVLALSN 417 (417)
T ss_dssp HHHHTTCCCHHHHTSCC
T ss_pred HHHHCCCCCCCEECCCC
T ss_conf 99987999762001249
|
| >d1gff1_ b.121.5.1 (1:) Microvirus capsid proteins {Bacteriophage G4 [TaxId: 10843]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Microviridae-like VP domain: Microvirus capsid proteins species: Bacteriophage G4 [TaxId: 10843]
Probab=100.00 E-value=0 Score=31492.83 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~DlsH~~~~t~~~G~L~PI~~~eVLPGDtf~l~~~~f~Rlat~~~pvmdn~~~d~ffFfVP~RlvW~dnWekF~g~~~ 80 (417)
T d1gff1_ 1 VPHDLSHLVFEAGKIGRLKTISWTPVVAGDSFECDMVGAIRLSPLRRGLAVDSRVDIFSFYIPHRHIYGQQWINFMKDGV 80 (417)
T ss_dssp CEECCCEEEEEEECSSBCEEEEEEEECTTCEEEEEEEEEEEECCBSSSCCSCEEEEEEEEEEESHHHHTHHHHHHHHHGG
T ss_pred CCCCCCCHHHHCCCCCEEEEEEECCCCCCCEEEECHHHHHCCCCCCCHHHHHEEEEEEEEECCEEEEEHHHHHHHHCCCC
T ss_conf 98554500110455650678775142589755644123201266532211210667899852411354125899756878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 np~~vP~vt~~~g~~~~dYlG~P~~~~~~~~~l~~rAYn~I~NewfRd~nl~ds~~v~~~dgpdd~a~y~lr~~~~~dyf 160 (417)
T d1gff1_ 81 NASPLPPVTCSSGWDSAAYLGTIPSSTLKVPKFLHQGYLNIYNNYFKPPWSDDLTYANPSNMPSEDYKWGVRVANLKSIW 160 (417)
T ss_dssp GCCCCCCEECCSSTTSSGGGSSCCCTTSEECHHHHHHHHHHHHHHTSCTTSCCCCCSSGGGSCTTTTTTCCBCBCCCCST
T ss_pred CCCCCCCEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 98878706458874387618888888732102478999999997713734355335147778875102222201101310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Ts~LP~~~~~s~~~g~~~~s~d~~gL~~a~a~ti~~lr~a~flQr~~Ei~argG~r~~~~v~~~d~rlqr~eylggg~~~ 240 (417)
T d1gff1_ 161 TAPLPPDTRTSENMTTGTSTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKEFGGHTSYDGDNRPLLLMRSEFWASGYDV 240 (417)
T ss_dssp TSCCCTTCCSCCCCCCCSSCCCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHTTTCCCCTTTTTCCEEEEEEEEEECCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCC
T ss_conf 13589998877556888664470435666667899999999999999999734983554576827765214765366422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~Tdqt~lg~~sg~g~~~~~~~v~~~~~~EHG~I~~L~~vr~~~t~~q~~~~~~~~~d~~~p~fa~Dp~l~geqP~~n~e 320 (417)
T d1gff1_ 241 DGTDQSSLGQFSGRVQQTFNHKVPRFYVPEHGVIMTLAVTRFPPTHEMEMHYLVGKENLTYTDIACDPALMANLPPREVS 320 (417)
T ss_dssp ECCSTTTTTCEEEECEEEEEEEEEEEECCSSEEEEEEEEEECCCCBTTBCCHHHHSSSCCHHHHSCCHHHHTTSCCEEEE
T ss_pred CCCCCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCCCCC
T ss_conf 46653112331032487215633553245541899999853786101045541562001452330680110347742323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 i~~~~~s~d~~v~Gy~~r~~~YR~~p~~V~g~f~sLd~W~~~~~~psl~~~~~v~v~~~~~D~~f~s~~~~q~~~~~~fn 400 (417)
T d1gff1_ 321 LKEFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSALPSTDLKDRVLVNTNNYDEIFQSMQLAHWNMQTKFN 400 (417)
T ss_dssp TTTTBSSCCTTCEEEECTTGGGSCCCCCCCTTTTTCTTCCSBCSCCCSSTGGGTBCCGGGGGGGBSSCSSCSEEEEEEEE
T ss_pred HHHHCCCCCCCEEECCHHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCHHHCEEECCCCCCHHHHCCCHHHHHEEEEEE
T ss_conf 54404778864014012045552472010200004564132114889984460152687503666137505500114775
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
+
T Consensus 401 ~~v~R~mPt~~~~i~~~ 417 (417)
T d1gff1_ 401 INVYRHMPTTRDSIMTS 417 (417)
T ss_dssp EEEECCCCCHHHHSCCC
T ss_pred EEEEECCCCCCCCCCCC
T ss_conf 67860489854332469
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31488.91 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~v~VmlPLd~v~~~~~~~~~~~~L~~LK~aGV~gV~vdVwWGivE~~~Pg~Ydws~yd~l~~mv~~~GL 80 (417)
T d1vema2 1 AVNGKGMNPDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGM 80 (417)
T ss_dssp CGGGCCCCTTCEEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 98887788995389986622245667889999999999983997899933424310589983570899999999998698
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Ki~vvmsfH~cGgnvgd~~ti~lP~Wv~e~~~~pDi~~tDr~G~r~~E~LS~~~d~t~~~~y~~~~~sF~~~f~~~~~~I 160 (417)
T d1vema2 81 KMIPIISTHQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVI 160 (417)
T ss_dssp EEEEEEECSCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGB
T ss_pred EEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 28999874235787788615688888870554888167768898883703766698701004167887999987740047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~ei~vglGp~GELRYPsyp~~~gW~~pg~GefqCYd~~~~~~fr~wl~~ky~al~aln~aWG~~~~~~~~~~~p~~~~ff 240 (417)
T d1vema2 161 AKIYLSGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVNKAWGTKLISELAILPPSDGEQF 240 (417)
T ss_dssp CCEEECCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTCCCSSGGGCCSCSCHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 99986057420003788810015657998866578999999999999860665632235228999754576778888766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~g~~s~YG~fFL~WYs~~L~~Hgdrvl~~A~~~F~~~~~v~l~~Kv~giHWwy~~~t~shaaElTAGydgY~~i~~~~ 320 (417)
T d1vema2 241 LMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNNPTIPHGAEKPAGYNDYSHLLDAF 320 (417)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTTCSSSTTTTHHHHTCSCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf 67983533335589999999999999999999985189877279999465033689999874154405855779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~r~~~~l~ftc~em~d~~~~~~~s~Pe~Lv~qv~~aa~~~gv~~~gENAl~~~d~~~~~~i~~~~~~~~~~~fTylRm~~ 400 (417)
T d1vema2 321 KSAKLDVTFTCLEMTDKGSYPEYSMPKTLVQNIATLANEKGIVLNGENALSIGNEEEYKRVAEMAFNYNFAGFTLLRYQD 400 (417)
T ss_dssp HHHTCEEEESCCSCCCCCCTTTCCCHHHHHHHHHHHHHHHTCCEEEECSSCCCSHHHHHHHHHHHHHTTCSEEEESCHHH
T ss_pred HHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
T ss_conf 86697598761244568899655797999999999999829936510053014867999999971127876157975656
Q ss_pred ----------------C
Q ss_conf ----------------8
Q 001738 683 ----------------V 683 (1019)
Q Consensus 683 ----------------~ 683 (1019)
.
T Consensus 401 ~l~~~~n~~~F~~fv~~ 417 (417)
T d1vema2 401 VMYNNSLMGKFKDLLGV 417 (417)
T ss_dssp HHTCHHHHHHHHHHTSC
T ss_pred HHCCCCCHHHHHHHHCC
T ss_conf 55796428889887439
|
| >d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=31426.28 Aligned_cols=1 Identities=0% Similarity=-0.725 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~p~~~~~kn~~~~~~~~dtlh~~~~~~~~C~~~~C~gs~m~~~~~~~~p~~~~~~~e~ll~eA~~Fi~q~y~e~~~~~~~ 80 (416)
T d1q2oa_ 1 GPKFPRVKNWELGSITYDTLCAQSQQDGPCTPRRCLGSLVLPRKLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQ 80 (416)
T ss_dssp CCSSCEEEBTTTCCEEECCGGGGCCBCCSCCSSCBCTTCSCC-----------CCHHHHHHHHHHHHHHHHHHTTCTTSH
T ss_pred CCCCEEEEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99745655404687563324442678899876733560025644466888999998999999999999999862756778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~R~~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGR~~W~~L~V~D~R~v~t~~~mfeal~~Hi~~ATN~G~I 160 (416)
T d1q2oa_ 81 AHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNRGNL 160 (416)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHCTTCTTGGGTTCCEEEECTTCCSHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999997464620899999887899870455222300216572665678999899999999999997079987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 r~~ITVFp~~~~g~~~~RIwN~QLIrYAGY~~~dGsiiGDPa~vefT~~c~~lGW~~~~t~FDvLPLViq~~g~~p~~fe 240 (416)
T d1q2oa_ 161 RSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDEAPELFV 240 (416)
T ss_dssp CCEEEECCCCBTTBCCCEECSSBSSCBCEEECTTSCEEECGGGHHHHHHHHHTTCCCCCSSSCBCCEEEECTTSCCEEEC
T ss_pred CEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEE
T ss_conf 63389737988999986675488786626578998764684216999999976888999987710289997899972673
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 iP~elvlEV~i~HP~~~wf~~LgLkWyavPaiSnM~L~iGGi~y~aaPFNGWYM~TEIgaRnl~D~~RYN~L~~VA~~mG 320 (416)
T d1q2oa_ 241 LPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFSAAPFSGWYMSTEIGTRDLCDPHRYNILEDVAVCMD 320 (416)
T ss_dssp CCGGGSCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCCBHHHHHTHHHHCTTTTCCHHHHHHHTT
T ss_pred CCHHHEEEECCCCCCCCHHHHCCCCEEECCHHCCCEEEECCEEECCCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 88778357346798983066638857605211255000077844245645330022355430455566666899999848
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 LDT~~~~sLWkDrAlvElN~AVLhSF~~~gVtIvDHHtas~~F~~~~~~E~~~~r~~pgdW~WlvPP~S~s~TpvfH~~~ 400 (416)
T d1q2oa_ 321 LDTRTTSSLWKDKAAVEINLAVLHSFQLAKVTIVDHHAATVSFMKHLDNEQKARGGCPADWAWIVPPISGSLTPVFHQEM 400 (416)
T ss_dssp CCTTCGGGCHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHSCCBCCHHHHSCSSSGGGSGGGGBCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHH
T ss_conf 78889740467789999999999899877964704068899999999999983899998852777888754541676665
Q ss_pred ---------------C
Q ss_conf ---------------8
Q 001738 683 ---------------V 683 (1019)
Q Consensus 683 ---------------~ 683 (1019)
.
T Consensus 401 ~n~~l~P~f~yq~~~w 416 (416)
T d1q2oa_ 401 VNYILSPAFRYQPDPW 416 (416)
T ss_dssp BBCBCSSEEECCCCCC
T ss_pred HHCCCCCCCCCCCCCC
T ss_conf 5034588865589999
|
| >d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31421.77 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 l~~~~~l~~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~r 80 (416)
T d1dfoa_ 1 LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDR 80 (416)
T ss_dssp CCTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98658845519999999999999987690586476657899999855741475658899975447773099999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~lF~a~~anVqp~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~ 160 (416)
T d1dfoa_ 81 AKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ 160 (416)
T ss_dssp HHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99983998205601557557999999863898866421465433335555544467237999646687667447899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~~kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPrggiI~~ 240 (416)
T d1dfoa_ 161 AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA 240 (416)
T ss_dssp HHHHCCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCSCEEEEE
T ss_pred HHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHCCEECCCCCCCCCCCCEEEEEHHHCCCCCCCEEEEE
T ss_conf 99836564873432255655879999998751715872212000003244347860000046521001046878638984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlv 320 (416)
T d1dfoa_ 241 KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV 320 (416)
T ss_dssp SSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
T ss_conf 23117689998766086534685177898988779987097889999999999999999998389443369988753688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 dl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~~~~~~~~~ 400 (416)
T d1dfoa_ 321 DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER 400 (416)
T ss_dssp ECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 73045898999999999729688678588999988889821767789984899879999999999999972786799999
Q ss_pred ---------------C
Q ss_conf ---------------8
Q 001738 683 ---------------V 683 (1019)
Q Consensus 683 ---------------~ 683 (1019)
.
T Consensus 401 ir~~V~~l~~~fPly~ 416 (416)
T d1dfoa_ 401 IKGKVLDICARYPVYA 416 (416)
T ss_dssp HHHHHHHHHHHSCSBC
T ss_pred HHHHHHHHHHCCCCCC
T ss_conf 9999999998089989
|
| >d1d8wa_ c.1.15.2 (A:) L-rhamnose isomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: L-rhamnose isomerase domain: L-rhamnose isomerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31420.15 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 s~i~~~ye~a~e~ya~~GID~e~al~~L~~~~Is~h~WqGddv~gFe~~~g~ltGGi~~tGnyPG~aR~~~E~~~D~~~~ 80 (416)
T d1d8wa_ 1 TQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQA 80 (416)
T ss_dssp CHHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCEEEEGGGGTTTCCCCC--------------CSCCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 91679999999999983988999999985484443036678765534677767776021278899889989999889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~Lipg~~~vnLH~~y~~~~~~vdrd~i~p~hf~~w~~wAk~~glglDfNpt~Fshp~~~~g~sLshpd~~iR~~wI~H~ 160 (416)
T d1d8wa_ 81 MRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHC 160 (416)
T ss_dssp HHTSCSCEEEEEEGGGCCCSSCCCGGGCCGGGGHHHHHHHHHTTCEEEEECCCSSSGGGTTSCSTTCSSHHHHHHHHHHH
T ss_pred HHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98568998400033320258866412258574899999999749774757655578442257762588889999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~c~~I~~~~G~~~g~~~v~niWi~DG~k~~~~d~~~~R~Rl~eSLdeI~a~~~d~~~~ld~vE~K~Fg~g~esy~vgs~ 240 (416)
T d1d8wa_ 161 KASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSN 240 (416)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEECCCCEESSCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEEECCSCBTTBCSEESSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEEEECCCH
T ss_conf 99999999986300776204776577676888683159999999999998715876650454230125565035763738
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 df~~~yal~~~a~~llD~GH~hPtenI~dkisalll~~~~~~lH~sr~~rwDsDhvvi~~del~~I~~ElVr~~~ld~v~ 320 (416)
T d1d8wa_ 241 EFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVH 320 (416)
T ss_dssp HHHHHHHHHHTCEEEEETTSSCTTCCHHHHHHHHTTTSSCEEEEECBCSSSSCCBCCCSSHHHHHHHHHHHHTTGGGTEE
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 88998763489679986798787665999999999727542576388856677612036489999999999645544422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~LD~fdasinrI~a~v~g~rn~qka~l~ALL~p~~~L~~~q~~gD~t~rla~~Ee~K~~P~~avW~~~c~r~~vp~~~~ 400 (416)
T d1d8wa_ 321 IGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAPGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSE 400 (416)
T ss_dssp EEECCCCCSSCHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHHHHHTTSCHHHHHHHHHHHTTCCCSTT
T ss_pred ECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 30023422466199999999999999999976899999999986799999999999851981889999999739998768
Q ss_pred ---------------C
Q ss_conf ---------------8
Q 001738 683 ---------------V 683 (1019)
Q Consensus 683 ---------------~ 683 (1019)
.
T Consensus 401 ~~~~v~~Ye~~v~~kR 416 (416)
T d1d8wa_ 401 WLESVRAYEKEILSRR 416 (416)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 8999999999885349
|
| >d2vnud4 b.40.4.16 (D:495-910) Exosome complex exonuclease RRP44 {Saccharomyces cerevisiae [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exosome complex exonuclease RRP44 species: Saccharomyces cerevisiae [TaxId: 4932]
Probab=100.00 E-value=0 Score=31416.04 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisi~~~~~g~~~l~VHIADva 80 (416)
T d2vnud4 1 FSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVT 80 (416)
T ss_dssp CCHHHHTTSCTTGGGCCCCSSTTCHHHHHHCGGGGGSEECTTSCCEEEESSSCCCCCEEEEEEECTTSCEEEEEEEECHH
T ss_pred CCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHH
T ss_conf 98789964432368643764453122115752323771177898799769999546565899995899599999983578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~v~~~s~Ld~~A~~R~~t~Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~~~~~g~i~~~~~~~s~I~~~~~ltY 160 (416)
T d2vnud4 81 HFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSY 160 (416)
T ss_dssp HHSCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHTTTSSCCBTSEEEEEEEEEEECTTCCEEEEEEEEEEEEBSEEEEH
T ss_pred HHHCCCCHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCEEEHHHHCCCCCCCH
T ss_conf 86299998999999848037589971144788886545205698202467765540210144420332012033322321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~ev~~~l~~~~~~~~~~~~l~~L~~~a~~l~~~R~~~g~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~s~~lVeE~Mi~A 240 (416)
T d2vnud4 161 EQAQLRIDDKTQNDELTMGMRALLKLSVKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLA 240 (416)
T ss_dssp HHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCEEEEECSSSSCEEEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 66788751354321000678999999999999998568754578742799423335565431122242014078776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 N~~vA~~l~~~~~~~~~~R~h~~p~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~~~~~ 320 (416)
T d2vnud4 241 NISVARKIYDAFPQTAMLRRHAAPPSTNFEILNEMLNTRKNMSISLESSKALADSLDRCVDPEDPYFNTLVRIMSTRCMM 320 (416)
T ss_dssp HHHHHHHHHHHCTTTCEEEEBCCCCGGGGHHHHHHHHHHHSCCCCCSCHHHHHHHHHTCCBTTBTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 08999999984788876400079997999999999997012676865225578999987475672699999999887788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~a~~~~~~~~s~~~~~H~gLgl~~YthfTSPIRRY~DLv~hrqL~a~l~~~~~~~~~~~~e~l~~i~~~~~~~e~~a~~a 400 (416)
T d2vnud4 321 AAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNKMDMICRNINRKHRNAQFA 400 (416)
T ss_dssp CCEEEEGGGSCGGGGCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHTTSSCCCGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87763015579976273765722015168677637899999999999737999977443999999999999999999999
Q ss_pred ---------------C
Q ss_conf ---------------8
Q 001738 683 ---------------V 683 (1019)
Q Consensus 683 ---------------~ 683 (1019)
.
T Consensus 401 er~~~~~~~~~~lk~~ 416 (416)
T d2vnud4 401 GRASIEYYVGQVMRNN 416 (416)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999997578
|
| >d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Phosphoenolpyruvate mutase/Isocitrate lyase-like domain: Isocitrate lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31413.60 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 k~~~~~v~~~~~~w~~pRw~~ikR~Yta~dV~~lRgs~~~~~~~a~~~A~kL~~lL~~~~~~~~v~~lGa~d~~~A~~~~ 80 (416)
T d1igwa_ 1 KTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQA 80 (416)
T ss_dssp CCHHHHHHHHHHHTTSGGGTTCCCSSCHHHHHHTTCSCCCCCHHHHHHHHHHHHHHTTTSSSSSEEEEBCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
T ss_conf 96799999999986696515689998999999966985876837899999999998604445706547757799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 kaGf~aiYvSG~~~sA~~~~~~~~~PD~gl~~~~~v~~~~~~I~~a~~~~d~~~~~~~~~~~~~~~~d~~lPIIADaDtG 160 (416)
T d1igwa_ 81 KAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAG 160 (416)
T ss_dssp HHTCCCEEECHHHHHHHSCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTCTTCCCCCCCEEEECTTC
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
T ss_conf 80998899646100165555678877765462889999999999988889999875200235444444310157742245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 fG~~~nv~r~vk~~i~AGaagihiEDQ~~~~KkCGHl~gK~lv~~~e~~~ki~AA~~a~d~~~~~~~IiARTDA~~a~li 240 (416)
T d1igwa_ 161 FGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLCADVTGVPTLLVARTDADAADLI 240 (416)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEESBCGGGCCCC----CEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH
T ss_conf 67658999999999967871897226766430100148974678999999999999877427998279986230555444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~sd~d~~D~~fi~g~Rt~eG~yr~~~G~d~aI~R~~aya~gADli~~Et~~~~~e~a~~fa~~v~~~~p~~~l~yn~SPs 320 (416)
T d1igwa_ 241 TSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPS 320 (416)
T ss_dssp SCCCCGGGGGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECC--
T ss_pred HCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCC
T ss_conf 20131115672057647343522247859999999984322667753168998999999998607876567623478887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 fnw~~~~~~~~~~~~~~eL~~lGy~~~~~~la~~ha~~~a~~~l~~~~~~~~gm~ayv~~~Q~~E~~~~~~g~~~~~hQ~ 400 (416)
T d1igwa_ 321 FNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQ 400 (416)
T ss_dssp --------------HHHHHHHHTEEEEEETTHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTHHHHHHHHTTTCCTTSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHH
T ss_conf 67201235567999999999659888996768999999999999999863498899999875898887744863020886
Q ss_pred ---------------C
Q ss_conf ---------------8
Q 001738 683 ---------------V 683 (1019)
Q Consensus 683 ---------------~ 683 (1019)
.
T Consensus 401 ~~G~~y~D~~~~~~~g 416 (416)
T d1igwa_ 401 EVGTGYFDKVTTIIQG 416 (416)
T ss_dssp HTTHHHHHHHHHHHCC
T ss_pred HHCCCHHHHHHHHHCC
T ss_conf 7542489999987169
|
| >d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: Isocitrate dehydrogenase, ICDH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31412.24 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~IavipGDGIGPEV~~ealkVL~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~ 80 (416)
T d1pb1a_ 1 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQ 80 (416)
T ss_dssp CCCCCCCCSSCBCCEEETTEEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCSHHHHHHHCT
T ss_pred CCCCCCCCCCCCEEEEECCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC
T ss_conf 99752279998679977998818999889998988624999999999999999874268985589998235799998499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~lp~~t~~~~~~~da~l~Gav~~P~~~~~~~~~l~lR~~ldlyanvRP~r~~pg~~spl~~~~~iD~vIvREnteG~Y 160 (416)
T d1pb1a_ 81 DVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY 160 (416)
T ss_dssp TCSSCHHHHHHHHHHSEEEECCCCCCSSSCCCCHHHHHHHHTTCCEEEEEEECCTTCCCSSSCGGGCEEEEEEECSSGGG
T ss_pred CCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 77799999999985498952886699988876667889987486474132002678886434556446599861134422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~t~~~~~Ri~r~AF~~A~~~~r~~vt~v~Kanvl~~~~gl 240 (416)
T d1pb1a_ 161 AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA 240 (416)
T ss_dssp GCCEECTTCHHHHHHHHHHHHTSCCCCCSCCSSCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
T ss_conf 45033456520688998766530530113653036765402122228999999999996699968999789765401678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 f~~~~~e~a~e~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~vDa~~~~lv~~P~~fdViv~~NlfGDIlSDlaa~l~Ggl 320 (416)
T d1pb1a_ 241 FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGI 320 (416)
T ss_dssp HHHHHHHHHHHHHCCEECTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCC
T ss_conf 99999999987631223344431101046676334289999999999985210467789613578777777888862376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 Gl~pSanig~~~a~fEp~HGSAPdiaGk~iANP~a~Ils~amML~~lg~~~~A~~i~~Av~~~l~~g~~T~Dl~~~~~~g 400 (416)
T d1pb1a_ 321 GIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGA 400 (416)
T ss_dssp TTCCCEEECSSCEEEECCSCCCGGGTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTEECHHHHTTSSSC
T ss_pred CCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 65445466877248877888615547999759299999999999987997899999999999997598124300046899
Q ss_pred ---------------C
Q ss_conf ---------------8
Q 001738 683 ---------------V 683 (1019)
Q Consensus 683 ---------------~ 683 (1019)
.
T Consensus 401 g~~~T~e~~daI~~~l 416 (416)
T d1pb1a_ 401 KLLKCSEFGDAIIENM 416 (416)
T ss_dssp EECCHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHCC
T ss_conf 7727999999999659
|
| >d1dnva_ b.121.5.3 (A:) Densovirus capsid protein {Galleria mellonella densovirus [TaxId: 37138]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) superfamily: ssDNA viruses family: Densovirinae-like VP domain: Densovirus capsid protein species: Galleria mellonella densovirus [TaxId: 37138]
Probab=100.00 E-value=0 Score=31342.55 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~IpRPi~~~~~~~~tyrK~HkFltfGlA~kvi~~~~t~~t~~~~~lTTsLaeiPw~~p~~YMnpsEF~lLP~Gs~v~e 80 (415)
T d1dnva_ 1 VYIIPRPFSNFGKKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVNRLLTTCLAEIPWQKLPLYMNQSEFDLLPPGSRVVE 80 (415)
T ss_dssp CCCCCCCCCCCCCEECCEEEEEEEEEECCCSCCCEECSSTTTCSBEEEEEEEEECCTTBGGGTCCHHHHHTCCTTCBCCC
T ss_pred CEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCCEECCHHHHHHCCCCCEEEE
T ss_conf 93746676778886799965446776200121001456662023232210151160345525248878710689866889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~vkvv~rn~RiAFeTnSS~T~lATLNQnk~~~~A~GLN~~~~G~nr~~T~f~s~epMiPt~t~~~~y~~v~~~~~y~~~ 160 (415)
T d1dnva_ 81 CNVKVIFRTNRIAFETSSTVTKQATLNQISNVQTAIGLNKLGWGINRAFTAFQSDQPMIPTATTAPKYEPVTGDTGYRGM 160 (415)
T ss_dssp EEEEEEEEEEEECCCCSCTTSCCCCSCCCCEEEEESTHHHHTTCBCCCCCCCCSSSCCSCCCCCCCCSSEECSSSCEECH
T ss_pred EEEEEEEECCEEEEEECCCCCCCEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 77899984670577755763101001022330110100302454213654556888745667786522355654689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 v~~~YG~~~~n~~~~~~~~~~P~hq~g~~~~L~nYfc~~~~~~~~tgGwpcl~~hi~e~da~~~~g~~vl~~~YkPk~g~ 240 (415)
T d1dnva_ 161 IADYYGADSTNDTAFGNAGNYPHHQVSSFTFLQNYYCMYQQTNQGTGGWPCLAEHLQQFDSKTVNNQCLIDVTYKPKMGL 240 (415)
T ss_dssp HHHHHCCCSSCTTSSSSSSSCCGGGGCCEEECCCEEEECCBSSSSCCCCCCGGGGSEECCTTTTTTSBCCCCEECCSSCB
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf 99974766678633457777875672772110002577652046889836789998750256678857888852776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ik~P~~~~i~g~p~~~g~~sv~~n~~~~~~a~~~~~~~at~n~s~s~~nl~~~fp~~~~~iyt~IEKsQ~~~~G~~g~~~ 320 (415)
T d1dnva_ 241 IKSPLNYKIIGQPTVKGTISVGDNLVNMRGAVVTNPPEATQNVAESTHNLTRNFPADLFNIYSDIEKSQVLHKGPWGHEN 320 (415)
T ss_dssp CSCCCCBCCCCCTTBTTBBSCCCCCCCSCCSCEECCCCCBCSSSCBCCCCCEECCCCCCCCCSSCTTSSBSCCTTTCCCT
T ss_pred CCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHEECCCCCCCC
T ss_conf 46743354336655332120010044225765478255443321200204315884103023422133402126766668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 p~iQPSlHIGv~pVPaLTTa~l~~~~~~~~n~TDt~~ywdV~~~~~V~~~~Pt~~P~~~~~nv~~~~~~y~~nl~~~~~t 400 (415)
T d1dnva_ 321 PQIQPSVHIGIQAVPALTTGALLINSSPLNSWTDSMGYIDVMSSCTVMEAQPTHFPFSTEANTNPGNTIYRINLTPNSLT 400 (415)
T ss_dssp TCCCCCCCCCCEEEEECCBCCCCSSCCSCCCBCCEEEEEEEEEEECCEECCCCCSTTCCSCCBCTTTCCCCCCCSSCSSC
T ss_pred CCCCCCEEECCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 75376246332204400113223378776762202589999988999855886544556678883303230446765556
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 s~~~GlY~~~~~~~~ 415 (415)
T d1dnva_ 401 SAFNGLYGNGATLGN 415 (415)
T ss_dssp SSSCCSSSCCSSCCC
T ss_pred CCCCCEEECCHHCCC
T ss_conf 521212641110379
|
| >d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31340.78 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~l~~l~~W~Fd~f~l~~~~~~~~~~~L~~~~~~lf~~~gl~~~f~i~~~~l~~Fl~~v~~~Y~~nPYHN 80 (415)
T d1so2a_ 1 LDLILVEEYDSLIEKMSNWNFPIFELVEKMGEKSGRILSQVMYTLFQDTGLLEIFKIPTQQFMNYFRALENGYRDIPYHN 80 (415)
T ss_dssp CCSHHHHHHHHHHHHHTSTTCCHHHHHHHHGGGGGGHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHTTSCSCSSSS
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 96110688999997224689882020155212334489999999999778377529899999999999998579998827
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~HA~dV~q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lE~~alliAA 160 (415)
T d1so2a_ 81 RIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDESYGCLSSNIPALELMALYVAA 160 (415)
T ss_dssp HHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCCTTCCCSSTTEECGGGTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHH
T ss_conf 89999999999999956554422111222233221111222332100122222333322201565408999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~HDvdHpG~nN~Flv~t~~pLA~lYnd~SVLEnhH~a~a~~lll~~~~~nil~~l~~~e~~~~r~lii~~ILATDm~~H 240 (415)
T d1so2a_ 161 AMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKH 240 (415)
T ss_dssp HHTTTTCCSCCHHHHHHTTCHHHHHTTTSSHHHHHHHHHHHHHHHTCGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGH
T ss_pred HHHCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 97226999966889987188789985898888999999999999648542143069999999999999999970464567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 f~~l~~f~~~~~~~~~~~~~~~~~~~r~lv~~~lik~ADIs~~~rp~~v~~~W~~~l~~EF~~QGd~E~~lglp~sp~~D 320 (415)
T d1so2a_ 241 FDFLAEFNAKANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGDEEANLGLPISPFMD 320 (415)
T ss_dssp HHHHHHHHHHHTSSSCCCCCTTCHHHHHHHHHHHHHHHHTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999998740047767787888999999999998624744582889999999999999987799866999985668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 R~~~~~~k~QigFi~~iv~PLf~~l~~a~~~~~~~~~~~~~n~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (415)
T d1so2a_ 321 RSSPQLAKLQESFITHIVGPLCNSYDAAGLLPGQWLEAEEDNDTESGDDEDGEELDTEDEEMENNLNPKPPRRKSRRRIF 400 (415)
T ss_dssp TTSCCHHHHHHHHHHHTHHHHHHHHHHTTCSCCEECC-------------------------------------CCSSEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 66564157899999998999999999983255999999998898778757664134400015554455776056677776
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 ~~~~~~l~en~~~w~ 415 (415)
T d1so2a_ 401 CQLMHHLTENHKIWK 415 (415)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 689999986255129
|
| >d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=31340.38 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~ktl~d~~~~~K~VlvRvD~NvPi~~g~I~d~~RI~~~~pTi~~ll~~~akvvl~SH~GRPkg~~~~~~~~~~~~~~~~ 80 (415)
T d16pka_ 1 EKKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGSCVLMSHLGRPKGIPMAQAGKIRSTGGVP 80 (415)
T ss_dssp CBCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCCBCGGGHHHHHHTTCCT
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99741013878998999934675555995897388999999999999788979999058998987555322222223312
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~sL~~~a~~L~~~l~~~V~f~~~~~~~~~~i~~l~~g~i~LLEN~Rf~~eE~~~~~~~~~~fak~LA~laDiyVN 160 (415)
T d16pka_ 81 GFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADVVSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYIS 160 (415)
T ss_dssp TCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCHHHHHTCCTTCEEEECCGGGBGGGGCSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 36833473889999998758674234431024456650577416874200024532322122138999998722868994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 DAFg~sHR~haS~~Gi~~~lps~~gg~L~ekEl~~L~~~l~~p~~P~~aIlGGaKisdKi~~i~~l~~k~D~iligG~~a 240 (415)
T d16pka_ 161 DAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGGAMA 240 (415)
T ss_dssp ECGGGTTSCCTTTTHHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECTTHH
T ss_pred CCCCHHHCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH
T ss_conf 56202204675122200014224678999999999999970977551899853653437999998885365565322188
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ntfL~a~G~~iG~sl~e~~~~~~a~~i~~~~~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d16pka_ 241 YTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEK 320 (415)
T ss_dssp HHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHHHHH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999809805544304443212666522321151678511203303101334443112222234543777787776667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~I~~AktI~wNGP~GvfE~~~F~~GT~~l~~~ia~~t~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~ 400 (415)
T d16pka_ 321 YVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLEL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTTTSSEECSCHHHHHHH
T ss_pred HHHHHHHHCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHHHHH
T ss_conf 76766513569996653213155151799999999998413479989987789999999719735870798778999999
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 L~G~~LPgi~aL~~k 415 (415)
T d16pka_ 401 LEGKTLPGVTVLDDK 415 (415)
T ss_dssp HTTCCCHHHHTSCBC
T ss_pred HCCCCCCHHHHHHCC
T ss_conf 879996257785069
|
| >d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: TK-like PP module domain: Pyruvate dehydrogenase E1 component, PP module species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31340.35 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~e~~~~~~iR~~~~~~v~~a~~~~~~~GGH~g~~ls~~~l~~vl~~~~~~~p~~~~~d~ 80 (415)
T d2ieaa2 1 ISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGD 80 (415)
T ss_dssp CCCSSCSSCGGGCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCCCCHHHHHHHHHHHHHHHHTCCCCCSSSCCC
T ss_pred CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99853688854368999889999999999999999999982678998898254679999999999985148987688887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ilskGHas~~lYa~l~~~g~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~~~~~a~~~ 160 (415)
T d2ieaa2 81 LVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRG 160 (415)
T ss_dssp EEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCTTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 79835750299999999839875035777753135789898888777888776798202157899999999987876530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~gDg~~~eg~~~ea~~~a~~~~l~nl~~i~d~N~~~~~~~~~~~~~~~~~~~~~~~~~gw~v~~~~~~ 240 (415)
T d2ieaa2 161 LKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWG 240 (415)
T ss_dssp SCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBC
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCHHCCCCCHHHHHHHHHHCCCEEEEEECC
T ss_conf 23578842899954320023899999988887288808999967863356671014311488999998648626874031
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~d~~~al~~~~~~~v~g~~~~~~~~~ga~~~~~~~~~~~~~~~l~~~l~~~~~~~l~~dGHd~~~l~~a~~~ 320 (415)
T d2ieaa2 241 SRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKK 320 (415)
T ss_dssp GGGHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTGGGSHHHHTTSTTSCHHHHTTCCBGGGCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 02444320102434334121033431100002441566665303421046787663131455665315740446899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ak~~~d~P~vI~a~TiKGkGlp~A~e~~n~~H~~kkl~~Ee~~~~r~rl~~pl~d~~~e~~pf~~p~~~s~e~~~l~err 400 (415)
T d2ieaa2 321 AQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQR 400 (415)
T ss_dssp HHHCCSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHHHTTCSCCHHHHTTCCCCCCCTTSHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98658996289973523368874334621012788899999999999839999813443179778888889999999999
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 ~~Lgg~lP~r~~~~~ 415 (415)
T d2ieaa2 401 QKLHGYLPSRQPNFT 415 (415)
T ss_dssp HTTTSCSSCCCSSCC
T ss_pred HHHCCCCCCCCCCCC
T ss_conf 984898876787889
|
| >d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31339.48 Aligned_cols=1 Identities=100% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~kltl~d~dl~gK~VlvRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~~ak~vIL~SH~GRP~g~~~~~~Sl~~va 80 (415)
T d1qpga_ 1 SLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVA 80 (415)
T ss_dssp CTTSBCBGGGCCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHH
T ss_pred CCCCCCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHH
T ss_conf 98666850322757998999932467643997896789999999999999879988999624899999879776869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~I~LLENvRF~~eE~~~~~~~~~~~~~~~~n~~~fak~La~laDiyVN 160 (415)
T d1qpga_ 81 KELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYIN 160 (415)
T ss_dssp HHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSHHHHTEEEETTEEEECCHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99985319846984577776311012334467579942111143310246543011100100269999987547848996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 DAFg~aHR~haS~~g~~~~~s~aG~lmekEl~~L~~~l~~p~rP~vaIlGGaKvsdKi~vl~~l~~k~D~iiigG~mant 240 (415)
T d1qpga_ 161 DAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFT 240 (415)
T ss_dssp CCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECHHHHH
T ss_conf 55011100565423455785633288999999999996499998599995476442899998787535557751103577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 flk~~~g~~ig~s~~e~~~~~~~~~i~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~ 320 (415)
T d1qpga_ 241 FKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKL 320 (415)
T ss_dssp HHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 88760377666531122211023689999876598675512278730245555531230013558765123466046789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~I~~a~tI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L 400 (415)
T d1qpga_ 321 FAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELL 400 (415)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHH
T ss_conf 99875368679997774152465240689999999997215798299957899999997598568806967789999998
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 ~G~~LPgi~aL~~~k 415 (415)
T d1qpga_ 401 EGKELPGVAFLSEKK 415 (415)
T ss_dssp TSCCCHHHHTSCBCC
T ss_pred CCCCCCHHHHHHHCC
T ss_conf 799970798885288
|
| >d2qeec1 c.1.9.8 (C:2-416) Uncharacterized protein BH0493 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Uronate isomerase-like domain: Uncharacterized protein BH0493 species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=31334.89 Aligned_cols=1 Identities=100% Similarity=-0.228 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~s~~~ia~~L~~~i~~~PIID~H~HL~p~~~~~~~f~~~~~l~~~hyyk~r~mr~~gv~e~~itg~~~~~~~~~~~~~ 80 (415)
T d2qeec1 1 SINSREVLAEKVKNAVNNQPVTDMHTHLFSPNFGEILLWDIDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEE 80 (415)
T ss_dssp CCCCHHHHHHHHHHHHHHSCEEECSCSCCCGGGGGGSBCSHHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH
T ss_conf 97458999999999975898868888969778511677881888431799999998539998980789847889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~p~~~w~~~~l~~~~~l~~~~~~~~~~~i~~~~~~~~~e~~~r~ll~~~nVe~v~tTDdP~D~L~~H~~~~~~~~ 160 (415)
T d2qeec1 81 LFIKRSPVSEACRGVLTCLQGLGLDPATRDLQVYREYFAKKTSEEQVDTVLQLANVSDVVMTNDPFDDNERISWLEGKQP 160 (415)
T ss_dssp HTTSSCCCSHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHTCCHHHHHHHHHHHTTEEEEECCBCTTCHHHHHHHHTTCCC
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 97428935899999888852567666767899999999762511179999998282035213797321899998604688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~v~ptfRpD~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (415)
T d2qeec1 161 DSRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIERMDPVYMAVSLPPTFSFPEESNRGRIIR 240 (415)
T ss_dssp CTTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHHHHCCSCEEEEECTTCCSSCSSHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 75223002479886321007899999886145644576799999999999987325688885687788677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~~~~e~g~~mQlH~Ga~Rn~n~~~~~~g~~~g~~~~~~L~~ll~~~~~~k~il~~l~~~~~~e~a~lag~f~~v~l 320 (415)
T d2qeec1 241 DCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLREYPNNKFLVTMLSRENQHELVVLARKFSNLMI 320 (415)
T ss_dssp HTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHHHCTTSCEEEEECCGGGHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf 99999987569817873376667773103478775767999999999848998879996896538999999853887067
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 gg~WWf~d~~~gm~~~l~~~~e~~~~~fvg~~TDsRsf~~~~~rheyfRRil~~~L~~~v~d~v~~g~~~~~~~l~~~v~ 400 (415)
T d2qeec1 321 FGCWWFMNNPEIINEMTRMRMEMLGTSFIPQHSDARVLEQLIYKWHHSKSIIAEVLIDKYDDILQAGWEVTEEEIKRDVA 400 (415)
T ss_dssp BCCCGGGCSHHHHHHHHHHHHHHHTTCSBCCCCCCSBTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 77016636899999999999874400112254586644303378999999999999999999973689997999999999
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 dI~y~Na~~yfg~~~ 415 (415)
T d2qeec1 401 DLFSRNFWRFVGRND 415 (415)
T ss_dssp HHHTHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999828899
|
| >d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=31333.13 Aligned_cols=1 Identities=0% Similarity=1.102 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~iP~k~~~~~~~~~~~~~~~~~~~~y~Gg~V~~P~~G~~~~V~~lDf~SLYPSii~~~Ni~ 80 (415)
T d1s5ja2 1 EISTWVKNLYYWEHRKRNWLIPLKEEILAKSSNIRTSALIKGKGYKGAVVIDPPAGIFFNITVLDFASLYPSIIRTWNLS 80 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTBCCCCHHHHHHTTCC--------------CCCCCCCSEEEEEEEEEEETTHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCC
T ss_conf 96489999999999977985789742245453201110034577387387079987657647878345339999996889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~R~~~~~~~~k~~~~~~~~~~~~d~~Q~A~Ki~~NS~ 160 (415)
T d1s5ja2 81 YETVDIQQCKKPYEVKDETGEVLHIVCMDRPGITAVITGLLRDFRVKIYKKKAKNPNNSEEQKLLYDVVQRAMKVFINAT 160 (415)
T ss_dssp TTTBSCSCCSSCCEECCSSSCCCEEBCCSSCCHHHHHHHHHHHHHHHTHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30237534578765445799745786378887427899999999987420021123442268888788999999877777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 YG~~G~~~~~~~~~~~A~~iT~~GR~~i~~~~~~~~~~g~~viygDTDSv~v~~~~~~~~e~~~~~i~~~~~~~le~e~~ 240 (415)
T d1s5ja2 161 YGVFGAETFPLYAPRVAESVTALGRYVITSTVKKAREEGLTVLYGDTDSLFLLNPPKNSLENIIKWVKTTFNLDLEVDKT 240 (415)
T ss_dssp HHHHHSTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEESCCHHHHHHHHHHHHHHSSCCEEEEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 77775466442328999899999999999888876605962466423314896288753999999987332212554425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~KKrY~g~~~dgkl~~kGie~vRrd~~~~~k~~~~~vl~~il~~~~~~~~~~~~~~i~~~l~~~~~~l~~~~ 320 (415)
T d1s5ja2 241 YKFVAFSGLKKNYFGVYQDGKVDIKGMLVKKRNTPEFVKKVFNEVKELMISINSPNDVKEIKRKIVDVVKGSYEKLKNKG 320 (415)
T ss_dssp EEEEEEC----CEEEECSSSCCCEESCCC--------CCSHHHHHHHHHHTTCCSCCTTHHHHHHHHHHHHHHCTTC---
T ss_pred EEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 51664431033203220255400110000356537889999999999997169878888878899999999999986079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 i~~~dl~~~k~l~k~~~~Y~~~~p~hv~~A~~l~~~g~~~~~GdrI~YViv~~~~~~~p~~~~~~~~iD~~yYi~~l~~p 400 (415)
T d1s5ja2 321 YNLDELAFKVMLSKPLDAYKKNTPQHVKAALQLRPFGVNVLPRDIIYYVKVRSKDGVKPVQLAKVTEIDAEKYLEALRST 400 (415)
T ss_dssp -------------------------------------------------------------------CCSSTTHHHHHTT
T ss_pred CCHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 78688202320146734311799389999999985599999989899999947999882220357998889999999999
Q ss_pred --------------C
Q ss_conf --------------8
Q 001738 683 --------------V 683 (1019)
Q Consensus 683 --------------~ 683 (1019)
.
T Consensus 401 l~~il~~~g~~~~el 415 (415)
T d1s5ja2 401 FEQILRAFGVSWDEI 415 (415)
T ss_dssp STTHHHHHSCCCCCC
T ss_pred HHHHHHHHCCCHHHC
T ss_conf 999998628994439
|
| >d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: GckA/TtuD-like superfamily: GckA/TtuD-like family: GckA/TtuD-like domain: Putative glycerate kinase (hypothetical protein TM1585) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31266.46 Aligned_cols=1 Identities=100% Similarity=1.268 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~lr~~~~~if~a~v~av~P~~~v~~~l~~~~~~~i~vvg~GKAa~~MA~~~~~~lg~~i~~g~vv~~~~~~~~~~~~i 80 (414)
T d2b8na1 1 PESLKKLAIEIVKKSIEAVFPDRAVKETLPKLNLDRVILVAVGKAAWRMAKAAYEVLGKKIRKGVVVTKYGHSEGPIDDF 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTSHHHHHHTTHHHHCCCSEEEEEESTTHHHHHHHHHHHHGGGEEEEEEEEETTCCCSCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 95689999999999998419789999847757999889999818999999999997276677059995898677888874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~~a~HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~VRk 160 (414)
T d2b8na1 81 EIYEAGHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSALLKSGASIEEINTVRK 160 (414)
T ss_dssp EEEEECSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 89978999998779999999999996489887689985088540011488999999999999999858998799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvpd~~t~~da~~il~~y~l~~p~~v~~~l~~~~~~~~~~v 240 (414)
T d2b8na1 161 HLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWPDSSTSEDALKVLEKYGIETSESVKRAILQETPKHLSNV 240 (414)
T ss_dssp TTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSCCCCCHHHHHHHHHHTTCCCCHHHHHHHTSCCCSCCSSE
T ss_pred HHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98753662799971558568999805889981312048867899888999999998398777689986513578433454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~ii~~n~~al~aa~~~a~~~G~~~~~~~~~l~Gea~~va~~~a~~~~~~~~~~~~~~~p~~li~GGEtTV~v~g~G~G 320 (414)
T d2b8na1 241 EIHLIGNVQKVCDEAKSLAKEKGFNAEIITTSLDCEAREAGRFIASIMKEVKFKDRPLKKPAALIFGGETVVHVKGNGIG 320 (414)
T ss_dssp EEEEEECHHHHHHHHHHHHHHTTCEEEEEEEEECSBHHHHHHHHHHHHHHHHHHCCSSCSSEEEEEEECCBCCCCSCCCC
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCC
T ss_conf 13895689999999999998749943995342457689999999999999985278888974899756568870689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 GRNqElaL~~a~~l~~~~~~~~ls~gTDG~DGptdaAGAivd~~t~~~~~~~gld~~~~L~~~DS~~f~~~~~~li~TGp 400 (414)
T d2b8na1 321 GRNQELALSAAIALEGIEGVILCSAGTDGTDGPTDAAGGIVDGSTAKTLKAMGEDPYQYLKNNDSYNALKKSGALLITGP 400 (414)
T ss_dssp CHHHHHHHHHHHHTTTCTTEEEEEEETTSCCSSSSCCEEEEETTHHHHHHHTTCCHHHHHHTTCHHHHHHHTTCEECCCC
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCEECCCC
T ss_conf 64399999999983699996999975478878988775887662799999869999999987786999997699786199
Q ss_pred -------------C
Q ss_conf -------------8
Q 001738 683 -------------V 683 (1019)
Q Consensus 683 -------------~ 683 (1019)
.
T Consensus 401 TgTNV~Dl~i~li~ 414 (414)
T d2b8na1 401 TGTNVNDLIIGLIV 414 (414)
T ss_dssp CSCCCCEEEEEEEC
T ss_pred CCCCHHHHEEEEEC
T ss_conf 99656350777969
|
| >d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Flavocytochrome b2, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31265.78 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~aFd~i~l~Pr~L~dvs~i 80 (414)
T d1kbia1 1 APGETKEDIARKEQLKSLLPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKV 80 (414)
T ss_dssp CTTCCHHHHHHHHHHHHTCCCGGGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSC
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCC
T ss_conf 99885444556777631599812167999999999986888888887146665099999999997360665335787678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Dlst~~lG~~l~~P~~Isp~g~~~~~~~~~~~~~~A~a~aa~~~~~~~~ls~~~~~~~~~~~~~a~~~~~~~~~q~y~~~ 160 (414)
T d1kbia1 81 DISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNS 160 (414)
T ss_dssp BCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCS
T ss_pred CCCEEECCCCCCCCEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCCC
T ss_conf 88534898417888788745640456822367887764777641365322322346568899872177541011021124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~l~~ra~~ag~~al~~tvD~~~~g~re~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~i~~ 240 (414)
T d1kbia1 161 DRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEE 240 (414)
T ss_dssp SHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf 58889999999987188510123344324651787872556654331444203554553277899985066899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~~~~~~~~i~kgi~~~~da~~~~~~G~~~i~vsnhggr~~d~~~~~~~~l~~i~~~~~~~~v~~~~~viadGGIR~G~D 320 (414)
T d1kbia1 241 LKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTD 320 (414)
T ss_dssp HHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHH
T ss_pred HHCCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
T ss_conf 86157752775200006777788743886245223211111112200000024666664111488513885388676789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 VaKALALGAdaVgigrp~L~~la~~G~egv~~~l~~l~~EL~~~M~l~G~~si~eL~~~~l~~~~~~~~~~~~p~~~~~~ 400 (414)
T d1kbia1 321 VLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLKARTVGVPNDVLYN 400 (414)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTTCEECCCCCCHHHH
T ss_pred HHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHC
T ss_conf 99999758998877689999998446999999999999999999998589997891998834232243367899512210
Q ss_pred -------------C
Q ss_conf -------------8
Q 001738 683 -------------V 683 (1019)
Q Consensus 683 -------------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~~~~~~ 414 (414)
T d1kbia1 401 EVYEGPTLTEFEDA 414 (414)
T ss_dssp HHCCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCC
T ss_conf 35678775333679
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=31262.18 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
T ss_conf 97999999999999998629999999999999999997699999999999865886041177787874249999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~ 160 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAI 160 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHCCCHHEECCCCHHCCCCCCCCCCCCHHHHHH
T ss_conf 99999865511233443344332101211221232012315717776514101001365201045600011002034677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~ 240 (414)
T d1o20a_ 161 REALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240 (414)
T ss_dssp HHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEECCCCCCCCEECCCCCCHHHHH
T ss_conf 76543212432124555543103444123334358699746079999876540344021046987871053335434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~FgPvl~v~~~ 320 (414)
T d1o20a_ 241 PVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVV 320 (414)
T ss_dssp HHHHHHHHSCTTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCCSSEEEEEEE
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCCCCEEEEEEEEEEEE
T ss_conf 68875441378643355522010889999999986899976986555465542110000002456770220037999994
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t 400 (414)
T d1o20a_ 321 KNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELT 400 (414)
T ss_dssp SSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGE
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHC
T ss_conf 99999999985589998179995899999999983981499991898688888879978156249989987456799849
Q ss_pred -------------C
Q ss_conf -------------8
Q 001738 683 -------------V 683 (1019)
Q Consensus 683 -------------~ 683 (1019)
.
T Consensus 401 ~~K~vv~~~~~~~~ 414 (414)
T d1o20a_ 401 TYKFVVLGEYHVRE 414 (414)
T ss_dssp EEEEEEECSSCCCC
T ss_pred EEEEEEECCCCCCC
T ss_conf 57799987875378
|
| >d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=31259.79 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~iV~l~GDE~tr~i~~~i~~~~~~~~~di~~~~~d~G~e~~~~tg~~l~~daieaik~~~v~lkG~~~tP~~ 80 (414)
T d1t0la_ 1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDE 80 (414)
T ss_dssp CCCCEEEEEEEEEECCHHHHHHHHHHHHHTTTTTEEEEEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 98643368779956718999999999999707897752799826789998629967799999998669886678679873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~s~n~~lR~~~~~~~~~rp~~~~~~~~~~~~~~~d~vvvREnteg~Y~g~e~~~~~~~~~~~~~~~~~ 160 (414)
T d1t0la_ 81 KRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITYTPSD 160 (414)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEEECC
T ss_conf 33330012211010028889862765231126864899876787674367404554425436899779860689985046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~a~~~a~~~r~~v~~~~K~nv~~~t~glfr~~~~eva~~yp~~~~~ 240 (414)
T d1t0la_ 161 GTQKVTYLVHNFEEGGGVAMGMYNQDKSIEDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFE 240 (414)
T ss_dssp CSCCEEEEEEEECSCCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCEEECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 65310000123467784268776205566788889999998469735875035614445288999999999876330134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~v~~~~~~~Da~~~~~~~~p~fdVivt~NLfGDILSDl~a~l~GglGl~pSanig~~~~~~~fe~~hg~aP~hGsapd 320 (414)
T d1t0la_ 241 AQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQ 320 (414)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf 32025666677789874148988728997674530566566562577431210115764334412355555543221001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 iAGk~iANP~A~ILS~amML~~lg~~d~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~lsT~ef~da 400 (414)
T d1t0la_ 321 KGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDK 400 (414)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHSCGGGCCGGGCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 37766539099999999999985265643689999999999999999679988231877666665556676589999999
Q ss_pred -------------C
Q ss_conf -------------8
Q 001738 683 -------------V 683 (1019)
Q Consensus 683 -------------~ 683 (1019)
-
T Consensus 401 vi~~L~~~l~~~~~ 414 (414)
T d1t0la_ 401 LGENLKIKLAQAKL 414 (414)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999998865659
|
| >d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Bacillus caldotenax [TaxId: 1395]
Probab=100.00 E-value=0 Score=31189.70 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~f~~~~~~~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~~~l 80 (413)
T d1t5la1 1 EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFF 80 (413)
T ss_dssp CCCCCCCCSSCCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC
T ss_conf 98427705889999888999999999865998589967787489999999999739998999489999999999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~v~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~vIVv~~~a~~~~l~~p~~~~~~~l~l 160 (413)
T d1t5la1 81 PHNAVEYFVSYYDYAQPEAYVPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSL 160 (413)
T ss_dssp TTSEEEEECCGGGTCCCSEEETTTTEEECCCSCCCHHHHHHHHHHHHHHHHCSCEEEEECGGGGSCCCCHHHHHHTSEEE
T ss_pred CCCCEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHEEEEE
T ss_conf 87745432421211442014743443322345677788888766655203567714653000253257857843105898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~G~~i~~~~l~~~L~~~GY~r~~~V~~~GeFsvRG~IiDIfp~~~~e~PvRIEffgDeIesIr~Fd~~tQrs~~~~~~v 240 (413)
T d1t5la1 161 RVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEVLGEREHV 240 (413)
T ss_dssp ETTCSCCHHHHHHHHHHTTCEECSSSCCTTEEEECSSEEEECCTTCSSEEEEEEESSSSEEEEEEEETTTCCBCCCCSEE
T ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHHHCCCCCCCCCCCEEEECCHHEEEECCCCCCCCCCCCCCEE
T ss_conf 66862528899999998435103100000205775351642478533564030650301103551135457211243179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~I~Pa~e~i~~~~~~~~a~~~i~~el~~~~~~~~~~~~~~ea~rl~~~~~~d~e~l~e~~~~~gie~y~~~~~~r~~~~~ 320 (413)
T d1t5la1 241 AIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLALRPPGST 320 (413)
T ss_dssp EECCSSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTCC
T ss_pred EEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 96346036269999999999999999999999987785889999998767579999852764444555443204666688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~tLlDY~~~d~l~~iDE~~~~~~q~~~~~~~~~~r~~~l~e~G~~LP~a~dn~pL~~ee~~~~~~~~i~vsatP~~~e~ 400 (413)
T d1t5la1 321 PYTLLDYFPDDFLIIVDESHVTLPQLRGMYNGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYEL 400 (413)
T ss_dssp CCCHHHHSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHHTSSCGGGGGSSCCCHHHHHHHCSEEEEEESSCCHHHH
T ss_pred CCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHH
T ss_conf 73244104787089993626569999999988899899888651657556557976889999864987999579970557
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 ~~~~~~v~q~irp 413 (413)
T d1t5la1 401 EHSPGVVEQIIRP 413 (413)
T ss_dssp HHSSSCEEECCCT
T ss_pred HHCCCEEEEEECC
T ss_conf 7468846886286
|
| >d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Stabilizer of iron transporter SufD family: Stabilizer of iron transporter SufD domain: Stabilizer of iron transporter SufD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=31189.07 Aligned_cols=1 Identities=0% Similarity=-0.792 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~GlPt~k~E~WKyT~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivf 80 (413)
T d1vh4a_ 1 NALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVF 80 (413)
T ss_dssp CHHHHHHHHHHC---CCCHHHHHHHHHHHHHCCCCTTSTTCTTCCCHHHHTSCEECCCCCCCHHHHHHHCCCCCSEEEEE
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE
T ss_conf 97899999998628846299999999999729889987281479879974357765677668002000234568548999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 vnG~~~~~ls~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~LN~a~~~~g~~I~V~~~~~~~~PI~i~~~~~~~~~~~~~~ 160 (413)
T d1vh4a_ 81 VDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNT 160 (413)
T ss_dssp ETTEECGGGSCCCTTSSCEEEEESCCTTCCCCSSCCHHHHHHHHHCSCEEEEEECTTCCCSSCEEEEEEECCCSSSCEEE
T ss_pred ECCEECHHCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCC
T ss_conf 89998210056755577288515755404110110012332321025432674125357604541467503644344333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~r~~I~v~ena~v~iiE~~~~~~~~~~~~n~~~ei~l~~nA~l~~~~iq~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 240 (413)
T d1vh4a_ 161 AHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLL 240 (413)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEESSSSCEEEEEEEEEEECTTCEEEEEEEECCCTTCEEEEEEEEEECTTCEEEEEEEEC
T ss_pred CCEEEEEEECCCCHHHHHHHCCCCCCCCCEECCEEEEEECCCCEEEEHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCC
T ss_conf 11145653055202211121145544100002205899526642430334442233421220112003454146532000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 G~~~~r~~~~~~L~G~~a~~~~~g~~~~~~~q~~D~~~~i~H~~~~t~S~~~~k~vl~d~s~~vf~G~i~V~~~A~~t~a 320 (413)
T d1vh4a_ 241 GGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDG 320 (413)
T ss_dssp CCSEEEEEEEEEECSTTCEEEEEEEECCCTTCEEEEEEEEEECSSSCEEEEEEEEEECTTCEEEEEEEEEECTTCTTEEE
T ss_pred CCCHHHCCCHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHH
T ss_conf 21100110000112000110011023466422433222320155542041343124666640488653035655225665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~q~~~~llls~~a~~~s~P~Lei~~ddv~~~Hgatvg~id~~~lfYL~sRGi~~~eA~~ll~~gF~~~~~~~~~~~~~~~ 400 (413)
T d1vh4a_ 321 QMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQ 400 (413)
T ss_dssp EEEEEEEECSTTCEEEEEEEEEECCSSEEEEEEEEEECCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHCCCCCCEEEECCEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 77665301567744875522899639816994000467898999999976999999999999998999998698299999
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 ~~~~~i~~~l~~~ 413 (413)
T d1vh4a_ 401 QVLARIGQRLPGG 413 (413)
T ss_dssp HHHHHHHTTSTTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999872489
|
| >d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31185.32 Aligned_cols=1 Identities=100% Similarity=1.433 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~ltl~d~d~~gK~VllRvD~NvPi~~g~I~Dd~RI~~~lpTI~~L~~~gak~Vvl~SH~GRP~~~~~~d~~SL~pva~~ 80 (413)
T d1hdia_ 1 NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE 80 (413)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCCSSCCTTTSCSHHHHHH
T ss_pred CCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98754102868998999931587744990897489999999999999879998999537889999977854587999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 L~~~L~~~V~f~~d~~g~~~~~~i~~l~~geilLLENvRF~~~E~~~~~~~~~~~~~~e~~n~~~f~~~La~l~DvyVND 160 (413)
T d1hdia_ 81 LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND 160 (413)
T ss_dssp HHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTEEECTTSCEEECCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99986886066056513556554320234317980221104211134432011000110243699999876328889953
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 AF~~aHR~haS~~gi~~~~~~~G~LmekEi~~L~~~l~~p~~P~vaIlGGaKvsdKi~vi~~L~~k~d~iiigGgmantf 240 (413)
T d1hdia_ 161 AFGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 240 (413)
T ss_dssp CGGGTTCCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEECCSCSGGGHHHHHHHHTTCSEEEECGGGHHHH
T ss_pred CHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCEEEECCHHHHHH
T ss_conf 42111125762220135642116899999999876540788761699842554338999998875310154035468999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 L~a~~g~~iG~sl~e~~~~~~~~~~~~~~~~~~~~i~lp~d~~~~~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~Ti~~~ 320 (413)
T d1hdia_ 241 LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKY 320 (413)
T ss_dssp HHHHHCCCBTTCCCCTTGGGTHHHHHHHHHHHTCEEECCCEEEEESSSSTTCCEEEEETTTCBCTTCEEEEECHHHHHHH
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 99715974563340322004677777789871984344541354124566555455442113588764431530236788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~I~~aktI~wNGP~GvfE~~~F~~GT~~i~~~ia~~~~~~a~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~L~~L~ 400 (413)
T d1hdia_ 321 SEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLE 400 (413)
T ss_dssp HHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCTTTSSEECSCHHHHHHHHT
T ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHC
T ss_conf 88761587799988834566761538999999999985148998999377999999974986798479278799999987
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 G~~LPgi~aL~~~ 413 (413)
T d1hdia_ 401 GKVLPGVDALSNV 413 (413)
T ss_dssp TCCCHHHHTSCBC
T ss_pred CCCCCHHHHHHCC
T ss_conf 9996246352049
|
| >d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein BC3205 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3205 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=31183.13 Aligned_cols=1 Identities=100% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~i~~~a~pl~~~d~~~~~~DL~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~vA~E 80 (413)
T d2qgma1 1 SGQSVQKNIVKSIQSQANPLKTIEPSKPFEDLKPLKKMIGNAQYVGLGENTHGSSEIFTMKFRLVKYLVTEMGFTNFAME 80 (413)
T ss_dssp CCSSHHHHHHHHHHHHCEECCCCCTTSCCGGGHHHHHHHTTCSEEEECCSSSCBHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 98427789999999846558778989876789999986479749998468667079999999999999997599789992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~d~~~~~~vn~yV~~g~g~~~~~~~~~w~~~e~~~lv~WlR~~N~~~~~~~~v~f~G~D~~~~~~~s~~~v~~yl~~~~p 160 (413)
T d2qgma1 81 EDWGNGLKLNEYIQTGKGNPREFLKLLYPTDEIIAMIEWMKDYNADPSNKKKIQFIGLDLKALDQGSFNKVIDYVRLHRP 160 (413)
T ss_dssp EEHHHHHHHHHHHHHCCSCGGGTSCTTSCBHHHHHHHHHHHHHHHCTTCCSCCEEEEEECSCCCHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCH
T ss_conf 69588999999986388787887787525177999999999970458978842699744465535469999999986196
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~ 240 (413)
T d2qgma1 161 DLLAEVEENYKELSSFTGSIQEYMKLTPKLKEKFKANAERVARLLKDENEQANTEIIPSEYIWAKATASAIEKFTTMLLP 240 (413)
T ss_dssp TSHHHHHHHHHTGGGSCSCHHHHTTSCHHHHHHHHHHHHHHHHHTSCC-----------CHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 78999999974603123478999775176788899999999999997676505432344899999999999999999706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~RD~~Maenl~~~~~~~~~KiivwAHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~ 320 (413)
T d2qgma1 241 NDYPSIIKLHEQYLADHAMWAQETFGGKTMVWAHNIHIAKGIIDEKLYPYVAGQFLKERLDNNYVTIGSTTTEGNFTLYS 320 (413)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHCSCEEEECCHHHHCSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCC
T ss_conf 87401377899999999999974789978999554110757565433666589999998488469999873466041257
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~~~p~~~~s~e~~l~~~~~~~~~ld~r~~~~~~~~~l~~~r~~r~iG~~y~P~~~~y~~~~~~~~fDa 400 (413)
T d2qgma1 321 EYNPSTGGKITTDTIPQDVKSFNYTLGKVPYKMFLLDNRHLKGQAEKWVKAKRPLLSIGGQILPNSSVYFDTSLLEQFDI 400 (413)
T ss_dssp CC-----CCCEEEECCCCTTSHHHHHHHSSCSEEEEEGGGCCHHHHHHHHSEEEEECCCSCC-----CEEEEEHHHHCSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCHHHHCCE
T ss_conf 77875566303678999952699997135877467552004535678883711211310244588764446895997978
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 li~i~~ttPa~~~ 413 (413)
T d2qgma1 401 IFHIRKTSPSHIK 413 (413)
T ss_dssp EEEEEEECBCCBC
T ss_pred EEEECCCCCCCCC
T ss_conf 9997146703129
|
| >d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: NADP-dependent isocitrate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=31183.00 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~ki~v~~pIv~l~GDeit~~~~~~i~~~l~~~~~di~~~~~d~G~~~~~~tg~~l~~eaiea~k~~~aiLkGa~~tP~ 80 (413)
T d1lwda_ 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCC
T ss_conf 99750305777995486379999999999970678886279970788999874996769999999975977788867997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~s~n~~lR~~ldl~an~RP~~~~~~~~~~~~~~~d~VivREnteg~Y~g~e~~~~~~~~~~i~~~~~ 160 (413)
T d1lwda_ 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK 160 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEECCCCCCCEEEEECC
T ss_conf 32235444432210001568976387458721002578876788887727752254443503423226766320577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ria~~af~~a~~~~~~vt~v~K~nvl~~~~glf~~~~~eva~~~p~~~~~ 240 (413)
T d1lwda_ 161 DGSSAKQWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFD 240 (413)
T ss_dssp TCCCCEEEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 66542233200256652000001332025678999999997159605775046356600479999999999874003564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~I~~~~~~vd~~~~~lv~~p~~~Vivt~NlfGDIlSDlaa~l~GglGl~pSanig~~~~~~~fe~~HGsap~~ag~~~ 320 (413)
T d1lwda_ 241 KYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQ 320 (413)
T ss_dssp HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHHH
T ss_pred CCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH
T ss_conf 23799861455555565228988739997563405676677874389777764324787554333346566000000121
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 iagk~iANP~a~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~sT~ef~d 400 (413)
T d1lwda_ 321 KGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLD 400 (413)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 17765659599999999999973454444579999999999999999779988465887666655555677638999999
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 aV~~~L~~~l~~~ 413 (413)
T d1lwda_ 401 TIKSNLDRALGRQ 413 (413)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999987529
|
| >d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase S, AMPS species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=31181.86 Aligned_cols=1 Identities=0% Similarity=0.337 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~f~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v~~~d~~i~r~~~~~~~~e~l~~~e~ 80 (413)
T d1zjca1 1 NYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEI 80 (413)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEEEECHHHHHHHHHHSCHHHHHHTSS
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCC
T ss_conf 97899999999999983068999989999567439999999999998699648995087899999871899668353202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~a~i~i~~~~p~~l~~vd~~ki~~~~~a~~~~~k~~~~~~~~~~~~W~i~~~Pt~a~A~~a~~~l 160 (413)
T d1zjca1 81 KSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPEL 160 (413)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCTTTTTTSCHHHHHHHHHHHHHHTHHHHHHHHTTCSCEEEEECCCHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCC
T ss_conf 56679999999865884899726895242037989999999999999899999986476566999568767776645899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~e~~~~~~d~if~a~~lD~~dpv~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~gTDLt~~l~~~~~~~~~~~~~~~~~ 240 (413)
T d1zjca1 161 SVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKE 240 (413)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEETTEEEEEEECTTBCCBCSEEEGGGTS
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCC
T ss_conf 87999999999999750788051799999999999999999854072479943898407999358737716875236777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~NlP~gEvft~P~~~~~~G~i~~~~~~~~~G~~~~~i~l~f~~G~vv~~~~~~~~~~l~~~l~~d~~a~~~gE~~i 320 (413)
T d1zjca1 241 QAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVAL 320 (413)
T ss_dssp SEEESBSSCCCEEECEEEEEEEEEEECSSCEEETTEEEEEEEEEEETTEEEEEEEEESHHHHHHHHTSSGGGGSEEEEEE
T ss_pred CCCCCCCCCCCEEEEECCCCEEEEEEECEECCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 76648899800686131586137999782526298832481899989999999747659999876404866536767753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 g~n~~~~~~~~~~~~~~L~DEkgt~H~a~G~~Y~~~~~~~~~~~~~~~~~~G~n~s~~H~D~~i~~~~~~i~gv~~dG~~ 400 (413)
T d1zjca1 321 VPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSK 400 (413)
T ss_dssp CCSSSTTGGGCCCCSSHHHHTTTSCEEEEECCCGGGBTTGGGCCHHHHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCE
T ss_conf 16886543435442451587489744667756421113665578145401798676457876347871568999818978
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
-
T Consensus 401 ~~I~~~G~f~~~~ 413 (413)
T d1zjca1 401 ELVFENGNWASTF 413 (413)
T ss_dssp EEEEETTEECTTC
T ss_pred EEEEECCEECCCC
T ss_conf 8999899976769
|
| >d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Glucodextranase, domain A species: Arthrobacter globiformis [TaxId: 1665]
Probab=100.00 E-value=0 Score=31178.49 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~S~l~lk~~~~~~~~GaiiAapt~~~pe~~~~~~n~d~Yry~W~RDaa~~~~al~~~G~~~~a~~~ 80 (413)
T d1ulva1 1 PATSLTGALRTQYDVSLMTVKSHEDKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARG 80 (413)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 98657889999999999999973468999848875888887666775689871166180599999999986998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~l~~~~~~~~G~~~~~y~~dg~~~~~~~Q~D~~g~~l~~~~~~~~~~~~~~~~~i~~a~~~l~~~~~~~~~~lWEe~~ 160 (413)
T d1ulva1 81 VEWLFTYQQQPDGHFPQTSRVDGTIGQNGIQLDETAFPILLANQIGRTDAGFYRNELKPAADYLVAAGPKTPQERWEETG 160 (413)
T ss_dssp HHHHHHHTCCTTSCCCSCBCTTSCBCCCCCBTHHHHHHHHHHHHHTCCCHHHHHHTHHHHHHHHHHHCSCBSBCTTSSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999985079996056546687767776763038999999999853001678999999999999738898745454678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~~T~~~~~~aL~~aa~la~~~gd~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~y~~r~~~~~~~~~~~~~~~~~ 240 (413)
T d1ulva1 161 GYSTSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGN 240 (413)
T ss_dssp BEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECST
T ss_pred CCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 85431189999999999999998398167889999999999999996018655623321011036666654320000123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~vDas~l~~~~~g~~~~~d~r~~~t~~~i~~~L~~~~~~g~~~~Ry~~D~y~~~~~g~~~~~~~i~t~W~~ 320 (413)
T d1ulva1 241 GAGVHPENAVLDGGFLEFVRLGVKAPADPYVADSLAETDASISQETPGGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPL 320 (413)
T ss_dssp TCCEEEGGGCCBGGGGHHHHTTSSCTTCHHHHHHHHHHHHHHEEEETTEEEECSBTTCCCSCCTTSCCCSSCCCCCBCTH
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 45666677765788763112178798887899999999998546778777420024667657788887633112789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~a~~~~g~~~~A~~ll~~l~~~~~~~G~LpEqv~~~~~~~~~~~~~~~~~~sa~PlaWS~A~~i~l~~~l~~g~~~ 400 (413)
T d1ulva1 321 LSGERGEYALANGQDALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAGAPV 400 (413)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999998648788999999999976687886563016788830025778999888776374789999999998669976
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~~~~~ 413 (413)
T d1ulva1 401 ETPQNVAARYAAG 413 (413)
T ss_dssp SSCHHHHHHHTSS
T ss_pred CCCHHHHHHHHCC
T ss_conf 6762899874149
|
| >d1a0tp_ f.4.3.2 (P:) Sucrose-specific porin {Enterobacterium (Salmonella typhimurium) [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane beta-barrels superfamily: Porins family: Maltoporin-like domain: Sucrose-specific porin species: Enterobacterium (Salmonella typhimurium) [TaxId: 90371]
Probab=100.00 E-value=0 Score=31178.64 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~GfeFhGY~RsG~g~s~~g~~~~~~~~~~~~~~~~g~~gRLGNE~d~y~El~l~~~~~~~~g~~~~~~~~~a~~~~~~~d 80 (413)
T d1a0tp_ 1 SGFEFHGYARSGVIMNDSGASTKSGAYITPAGETGGAIGRLGNQADTYVEMNLEHKQTLDNGATTRFKVMVADGQTSYND 80 (413)
T ss_dssp CCEEEEEEEEEECCEETTSSCCCCCTTCSGGGGGTCCCCCTTCCCSEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCSS
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCC
T ss_conf 95168527785734847898654563216565666565424664351798883457781599599999997115655578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~q~yve~~nl~~f~~~~~~a~~WaGkR~y~r~~dIhi~D~~y~~~sG~GaGieni~lG~g~~~~~~~~~~ 160 (413)
T d1a0tp_ 81 WTASTSDLNVRQAFVELGNLPTFAGPFKGSTLWAGKRFDRDNFDIHWIDSDVVFLAGTGGGIYDVKWNDGLRSNFSLYGR 160 (413)
T ss_dssp CCGGGCCCEEEEEEEEEESCTTCCGGGTTCEEEEEEEECTTCEEEGGGTEEEEBCEEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCCCCCCCHHEEEEHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEECEEEEECCCCCEEEEEEEEC
T ss_conf 75666530110303464586434677998639744420366567542310468658857564721037884688999942
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~g~~~~~~~~~~~~~G~~~G~nk~~ 240 (413)
T d1a0tp_ 161 NFGDIDDSSNSVQNYILTMNHFAGPLQMMVSGLRAKDNDERKDSNGNLAKGDAANTGVHALLGLHNDSFYGLRDGSSKTA 240 (413)
T ss_dssp EEECTTCGGGEEEEEEEEEEEEETTEEEEEEEEECTTGGGCBCSSSSBSCSSCCSEEEEEEEEEEEEESTTSSEEEEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEH
T ss_conf 56776667875111687531157379999964303773443215654346764465308999996142000358635151
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 lQyg~G~~a~~~~~~~~~~~~~~~~s~Rl~~~G~~~~~~~~~~~~~~~y~~~~d~~~~~~~~~~~s~gvRP~y~~~~~~~ 320 (413)
T d1a0tp_ 241 LLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPLSENWSVAPAMLAQRSKDRYADGDSYQWATFNLRLIQAINQNFA 320 (413)
T ss_dssp EEEEEETTCSCSBTTCCTTCCTTCEEEEEEEEEEEESSSSEEEEEEEEEEEEESSSSTTCEEEEEEEEEEEEEESSSSEE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCEE
T ss_conf 62375715577565787862799508999986644135876776668999851667789970799999888589668689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~E~gy~~~~~~~~g~~~~~~~~~~~~K~TlA~~~~~g~~~~fwsRPeiR~faTY~~w~~~~~~~~~~~~~~~~~~~~~ 400 (413)
T d1a0tp_ 321 LAYEGSYQYMDLKPEGYNDRQAVNGSFYKLTFAPTFKVGSIGDFFSRPEIRFYTSWMDWSKKLNNYASDDALGSDGFNSG 400 (413)
T ss_dssp EEEEEEEEEEEEECTTGGGCCCEEEEEEEEEEEEEEESSCTTCTTCCCEEEEEEEEEEECGGGGGSCSSSSTTBTTBCSS
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCC
T ss_conf 99998886640344675366666783589999763132897876779789999999805412200224565454677888
Q ss_pred ------------C
Q ss_conf ------------8
Q 001738 683 ------------V 683 (1019)
Q Consensus 683 ------------~ 683 (1019)
.
T Consensus 401 ~~~~fGvQ~E~Ww 413 (413)
T d1a0tp_ 401 GEWSFGVQMETWF 413 (413)
T ss_dssp CEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEC
T ss_conf 8789999998769
|
| >d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Amidase signature (AS) enzymes superfamily: Amidase signature (AS) enzymes family: Amidase signature (AS) enzymes domain: Malonamidase E2 species: Bradyrhizobium japonicum [TaxId: 375]
Probab=100.00 E-value=0 Score=31109.96 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~ls~~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~lna~~~~~~~~~~~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~ 80 (412)
T d1ocka_ 1 MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVGIKDIIDTANMPTEMGSEIYR 80 (412)
T ss_dssp CCCHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHCCEEEECTTCCCCSSSTTTTCEEEEETTBCCSSSCCCTTSGGGT
T ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 98789999999869998999999999999976961598174439860766798688879987661778974166486661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~a~~V~~L~~aGaii~gkt~~~e~~~~~~~~~~np~~~~~~~GgSSgG~aaava~g~~~~a~GsDtgGSiR~PA 160 (412)
T d1ocka_ 81 GWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLNPHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPA 160 (412)
T ss_dssp TCCCSSCCHHHHHHHHTTCEEEEEECCCGGGSSCCCSCCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHH
T ss_pred CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
T ss_conf 78875301477652012433000001666502566543334466666777678761111034566557654023441015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~cGi~GlKPT~G~v~~~g~~~~s~~~dt~Gp~arsv~Dl~~~l~~i~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 240 (412)
T d1ocka_ 161 AYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAKAPRIGVVRQEFAGAVEPAAE 240 (412)
T ss_dssp HHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHHHHHHCCGGGSSCCCCSSCEEEECCCGGGCCCCHHHH
T ss_pred HHHCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 55302101344100123344443201111223445188999999864288721244776444334432323345106777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~a~~~L~~~G~~v~e~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 320 (412)
T d1ocka_ 241 QGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAPMLRASLDATVGLTPKEYDEARR 320 (412)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHSGGGSCHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 78888888888764023223453102333455541125789887777640242321245544333210122210001124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~r~~~~~~~~~~f~~~D~ll~Pt~p~~ap~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~GlPvGlQiig~~~~D~~lL 400 (412)
T d1ocka_ 321 IGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGDPRYNRLWTLMGNPCVNVPVLKVGGLPIGVQVIARFGNDAHAL 400 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEESSSSSCCBGGGCCCCCCTTTHHHHHHCCCEEEEEEEEETTEEEEEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHH
T ss_conf 67899999999982799999689988776300045687577599999789849983668999607688889999899999
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
.
T Consensus 401 ~~A~~~E~alg~ 412 (412)
T d1ocka_ 401 ATAWFLEDALAK 412 (412)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998583
|
| >d1yzya1 c.146.1.1 (A:1-412) Hypothetical protein HI1011 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YgbK-like superfamily: YgbK-like family: YgbK-like domain: Hypothetical protein HI1011 species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=31107.79 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 i~iIADDlTGA~dt~~~~~~~G~~t~~~~~~~~~~~~~~~dvv~i~t~SR~l~~~eA~~~v~~~~~~l~~~~~~~~~~Kv 80 (412)
T d1yzya1 1 LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKY 80 (412)
T ss_dssp CEEEESSHHHHHHHHHHHHTTTCCEEEEESCCSSCCCSCCSEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 96895273528999999998799099971788500057899899985778999999999999999999863897158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~s~~DStlRGnig~Ei~a~~~~~~~~~~~v~PA~P~~gR~t~~G~~~v~g~pl~~t~~a~dP~tP~~~s~l~~ll~~qs~ 160 (412)
T d1yzya1 81 CSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAK 160 (412)
T ss_dssp CTTCCCCTTCTHHHHHHHHHHHHTCCCEEECCCBGGGTEEEETTEEEETTEEGGGSGGGGCSSSCCCCCBHHHHHHHHCS
T ss_pred EECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCEEEECCEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 73133777678589999999763997699946756577699998999898875676100288989775027777555237
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~v~~i~~~~v~~~~~~~~~~l~~~~~~~~~~vv~Da~t~~dL~~ia~a~~~~~~~~GsaGla~~l~~~~~~~~~~~~~~ 240 (412)
T d1yzya1 161 GKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLSGGKKGTNAF 240 (412)
T ss_dssp SCEEEECHHHHTTCHHHHHHHHHHHHHTTCSEEEECBSSTHHHHHHHHHTTTCSEEEESHHHHHHHHHHHHTSCCGGGCC
T ss_pred CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCC
T ss_conf 85354219988645067999999876179866998369889999999973288079954407778887512466654345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~Lvv~GS~s~~T~~Ql~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1yzya1 241 TPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNENYIEQLYQWVIANLDSEFAPMVYATVPPDALKAIQHQ 320 (412)
T ss_dssp CCCSCCEEEEECCCSHHHHHHHHHHTTTSCEEECCHHHHHHCTTHHHHHHHHHHTTTTSSSCCEEECCCCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 78888679998267488999999998509859963899617817999999999998736997588843764555566543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~i~~~l~~~~~~l~~~~~~~lv~tGGdTa~av~~~Lg~~~l~~~~ei~pGvp~~~~~~~gl~ivtK~G~fG~ 400 (412)
T d1yzya1 321 FGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPWLKAVEEDIFLALKSGNFGK 400 (412)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEESHHHHHHHHHHHTCCEEEEEEEEETTEEEEEESSSSCEEEEECTTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCC
T ss_conf 01677999999999999999875587869992639999999975998666757426982079766998079997898898
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
.
T Consensus 401 ~D~~~~a~~~~~ 412 (412)
T d1yzya1 401 EDFFEYAQGMFL 412 (412)
T ss_dssp TTHHHHHHHTTC
T ss_pred HHHHHHHHHHHC
T ss_conf 569999999759
|
| >d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]
Probab=100.00 E-value=0 Score=31105.58 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~ 80 (412)
T d1yaaa_ 1 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp CTTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHH
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 94734458747998699999998467898968830677748889988868999999999728654777899877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~ 160 (412)
T d1yaaa_ 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCC
T ss_conf 99999723447665666526871442046799999987503899877246435740679999859910105633334344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1yaaa_ 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred CCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCC
T ss_conf 21101000124578751799944899985445899999999866114887974520010000588656524432223212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 320 (412)
T d1yaaa_ 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 46887599982577645676760799975056666788888888889999987736797688999999706847789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls~e~~~~L~~e~~V~~~~g~Ris~~g~~~~~i~~l 400 (412)
T d1yaaa_ 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHH
T ss_conf 89999999999999999999997289888753689952798229699999999996788878988798515988889999
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
.
T Consensus 401 ~~ai~~v~k~~~ 412 (412)
T d1yaaa_ 401 AKAIDEVVRFYA 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999998509
|
| >d1rxxa_ d.126.1.4 (A:) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=31105.01 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~v~sE~g~Lk~Viv~~Pg~e~~~l~p~~~~~~lf~~~~~~~~a~~eh~~f~~~L~~~Gv~V~~l~~~l~e~~~~~~~ 80 (412)
T d1rxxa_ 1 TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEA 80 (412)
T ss_dssp CCSEECCSSSCEEEEEECCCCHHHHTCCTTTTGGGTCSCCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHHHTTSHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCHHH
T ss_conf 97753777100007896698388773690015664367788999999999999999997798899705768877349588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~plpn~~F~R 160 (412)
T d1rxxa_ 81 LKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTR 160 (412)
T ss_dssp HHHHHHHHSCHHHHCTTTHHHHHHHHHTSCHHHHHHHHHHCEEGGGSCSCHHHHHHHHHHHHSCCCCEEECCCGGGGCTT
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHEECC
T ss_conf 99999875032334655899999998708989999998626421003444332112211000356533578862121315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 D~~~~i~~gvii~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~EGGDvl~~g~~~l~~g~s~RTn 240 (412)
T d1rxxa_ 161 DTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSS 240 (412)
T ss_dssp TTEEECSSEEEECCCSSGGGHHHHHHHHHHHHHCHHHHTSCCEEEECCTTSCCTTCCCCGGGEEEEETTEEEEEESSSSC
T ss_pred CCCCEECCCEEECCCCCHHHCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCC
T ss_conf 77534669789668997365436799999998580220576310147655547766042560899679689999431050
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~gi~~L~~~l~~~~~~~~v~~~~~p~~~~~~HLDt~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1rxxa_ 241 RQAIGQVAQSLFAKGAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTF 320 (412)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEECCC--CCCCHHHHEEEEETTEEEECHHHHTTCEEEEEEECTTSTTSEEEEECSSCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCEEEECCCCEEEEEHHHCCCCCCEEEECCCCCCCCCEEECCCCCH
T ss_conf 99999999986642806775502678765420025427751798599831242754430442156655551010254317
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~l~~~l~~~~~~~i~~~~d~~~~~~e~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gi~vi~v~~~el~~~gGg~h 400 (412)
T d1rxxa_ 321 LEVVAESLGLKKLRVVETGGNSFAAEREQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGH 400 (412)
T ss_dssp HHHHHHHTTCSCCEEEECCCSCC--CCSSCCCCCCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCTTTTSSSCCTT
T ss_pred HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCE
T ss_conf 89999971898707955798525555666406520899679989984889999999997899899966567413798867
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
.
T Consensus 401 C~T~pl~Re~i~ 412 (412)
T d1rxxa_ 401 CMTCPIVRDPID 412 (412)
T ss_dssp TTCEEEEECCCC
T ss_pred ECCCCCCCCCCC
T ss_conf 887034627999
|
| >d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]
Probab=100.00 E-value=0 Score=31104.82 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~s~~~~~~~~~~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lr 80 (412)
T d1ajsa_ 1 APPSVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFR 80 (412)
T ss_dssp CCCCTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHH
T ss_pred CCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 99584440876899769999999836899996884178875888999886899999999973787688889977789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 eaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~ 160 (412)
T d1ajsa_ 81 TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRY 160 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEEC
T ss_pred HHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECC
T ss_conf 99999985157843245662230365305678899999988764047998989994786331689999859927874223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~ 240 (412)
T d1ajsa_ 161 WDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAI 240 (412)
T ss_dssp EETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHCCCCCCCHHHH
T ss_conf 36233554378999999725677389995589998687899999999999986389789830765654059865651566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (412)
T d1ajsa_ 241 RYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWT 320 (412)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 65444124321234663223577777345445616788999999999998631535641689999999853888899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls~~~v~~L~~e~gV~~vpg~Ri~~ag~~~~~i~~~ 400 (412)
T d1ajsa_ 321 GNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPSGRINMCGLTTKNLDYV 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTSEEEGGGCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEEECCCEEEECCCCHHHHHHH
T ss_conf 99999999999999999999998489887036658975798459899999999985999981898688336988889999
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
.
T Consensus 401 a~aI~~av~~~~ 412 (412)
T d1ajsa_ 401 ATSIHEAVTKIQ 412 (412)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999639
|
| >d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Hypothetical protein TT1467, N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=31104.01 Aligned_cols=1 Identities=100% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~lalvlH~HqP~vr~~~~~~~~e~w~~~a~~e~YlPll~~~~~l~~~~~~~k~t~~lsP~LleqL~D~~l~~~f~~~l 80 (412)
T d1ufaa2 1 MARFALVLHAHLPYVRAHGMWPFGEETLYEAMAETYLPLIRVLERLRAEGVEAPFTLGITPILAEQLADARIKEGFWAYA 80 (412)
T ss_dssp CEEEEEEEEECCCCCTTSCSTTTSHHHHHHHHHHTHHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCHHHHHHHHHHH
T ss_conf 96379998257876568987874245999999998888999999998428983399997789999850878888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~r~L~~~G~vEl~~~~y~H~ilpll~~~~~~~~ 160 (412)
T d1ufaa2 81 KDRLERAQGDYQRYRGTALEASARHQVAFWELTLDHFQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWA 160 (412)
T ss_dssp HHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCHHHHHH
T ss_conf 99998750556532340667888888999999999999965458999999997598688835412333321796799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Qi~~~~~~~~~~fG~~P~G~W~~E~a~s~~~l~~~~~~g~~~~~~~gl~~iL~~~Gi~y~~~d~~~l~~~~~~~~~~~~~ 240 (412)
T d1ufaa2 161 QIKTGVSTYRRHFAKDPTGFWLPEMAYRPKGPWKPPVEGPPEGVRPGVDELLMRAGIRYTFVDAHLVQGGEPLSPYGEAA 240 (412)
T ss_dssp HHHHHHHHHHHHHSSCCCBEECGGGCBCCSEEECCSSSSSCCEEECCHHHHHHHTTCCEEEECHHHHHCSCCCCC-----
T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCC
T ss_conf 99999999999759998867674222044113433321442102452889999739978997749985078766555556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~y~~~~~~~~v~~ffRD~~lSd~I~~~~~Gf~~~~~~~e~a~~d~~~~l~~~r~t~~~~~~~~~~~~Dgen 320 (412)
T d1ufaa2 241 LGPVESQEATYHVHELESGLRVLARNPETTLQVWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLAEKAPYDPEA 320 (412)
T ss_dssp ---CCCCGGGGSCEECTTSCEEEEBCHHHHHHHHCTTTSGGGSTTSBCSSCCCTTTCCCCEECCCSSCCGGGCEECCHHH
T ss_pred CCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 67533345650330489738999668777546332326988765356665221334489987113467855361068899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 awe~~~~~a~~Fl~~l~~~~~~~~~~ivv~~~D~ElFGhww~eg~~fL~~l~~~l~~~~~i~~tT~se~l~~p~~~v~lp 400 (412)
T d1ufaa2 321 AFAKTEEHARHFVGLLERLAGRHPEGVILSPYDAELFGHWWYEGVAWLEAVLRLLAQNPKVRPVTAREAVQGPAVRTALP 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHTCSSEEECCHHHHTCSCCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCEEECC
T ss_conf 99998977999999999875058887589445588604024310999999999863189839976999982889714258
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
+
T Consensus 401 ~sSWg~gg~~~v 412 (412)
T d1ufaa2 401 EGSWGRGGDHRV 412 (412)
T ss_dssp SBCSSGGGSSTT
T ss_pred CCCCCCCCCCCC
T ss_conf 988767898889
|
| >d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Tyrosine aminotransferase (TAT) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=0 Score=31103.54 Aligned_cols=1 Identities=0% Similarity=-1.060 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
=
T Consensus 1 ~~~~~~~~~~~~~~pir~~~~~~~~~~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LRea 80 (412)
T d1bw0a_ 1 WDVSMSNHAGLVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREA 80 (412)
T ss_dssp CCCCCCHHHHTCCCHHHHHHHTCCCCCSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 98781234568852899999856777799984788697899999852129999999998628777788998688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 160 (412)
T d1bw0a_ 81 VATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDW 160 (412)
T ss_dssp HHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999975475435687888886999446222025666543114432046411330144455405864222332223333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T d1bw0a_ 161 EADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTV 240 (412)
T ss_dssp EECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 12467887653111222222334333332201443023211222377666520217875447888764100001223433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 320 (412)
T d1bw0a_ 241 PRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAM 320 (412)
T ss_dssp CEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 11311555755756877743201240433003555554034553347750343202222333222333322110278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~l~~~~g~~~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~e~l~eal 400 (412)
T d1bw0a_ 321 YLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAV 400 (412)
T ss_dssp HHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHH
T ss_pred HHHHHHHHHCCCEECCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 99999987349254378971499995782343788899999999998699999966214899939999738999999999
Q ss_pred -----------C
Q ss_conf -----------8
Q 001738 683 -----------V 683 (1019)
Q Consensus 683 -----------~ 683 (1019)
.
T Consensus 401 ~Rl~~~l~~~~~ 412 (412)
T d1bw0a_ 401 ERIKAFCQRHAA 412 (412)
T ss_dssp HHHHHHHHHHBC
T ss_pred HHHHHHHHHCCC
T ss_conf 999999986179
|
| >d1t3ca_ d.92.1.7 (A:) Botulinum neurotoxin {Clostridium botulinum, serotype E [TaxId: 1491]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Clostridium neurotoxins, catalytic domain
domain: Botulinum neurotoxin
species: Clostridium botulinum, serotype E [TaxId: 1491]
Probab=100.00 E-value=0 Score=31033.18 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~InnFNyndPVnn~~I~~~r~~~~~~~~KAFkI~~nIWViPER~~~~t~p~d~~pp~~~~~~d~~yYDpnyLsTD~EKD 80 (411)
T d1t3ca_ 1 PKINSFNYNDPVNDRTILYIKPGGCQEFYKSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKNGDSSYYDPNYLQSDEEKD 80 (411)
T ss_dssp CCCCCCCTTSCCCSSSEEEEECTTCSSCEEEEEEETTEEEEEEECCTTCCGGGGSCSCSTTTTSSCCBCTTTTCSHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
T ss_conf 97666667898899728999448899712435620776875111247778212489732346887513753145621788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~FLk~iIKLf~RINs~~~G~~LL~~Is~aiPf~G~~~t~~~ef~~~~~~~~n~~~s~~~~~~~~~NlvIfGPg~nI~en~ 160 (411)
T d1t3ca_ 81 RFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVEIKFSNGSQDILLPNVIIMGAEPDLFETN 160 (411)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHHHHHHHTCCCCSCCTTSCTTSCCCCTTTCEEEECTTSCEEEECCSEEEEECCSBTTCCE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCHHHEEEEEEEECCCCCCCCCC
T ss_conf 99999999999863745799999999736875789999853311355430356336885201310269987885425665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~n~~~s~nGfGt~~~i~F~P~~t~~f~~~~~~~F~~DPAl~L~heLIhsLh~LYGIk~i~~~~~i~~~~~~~~ 240 (411)
T d1t3ca_ 161 SSNISLRNNYMPSNHGFGSIAIVTFSPEYSFRFNDNSMNEFIQDPALTLMHQLIHSLHGLYGAKGITTKYTITQKQNPLI 240 (411)
T ss_dssp EEECCCGGGCCGGGTTSCCCEEEECCTTEEEEEECTTSCEEECCHHHHHHHHHHHHHHHHTTCCTTTTTCEECTTTTTCC
T ss_pred CEEEEECCCCCHHHCCCCEEEEEEECCCEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 03787405776322476504799976634786136777714248899999999999987618667887642101000556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~v~~eelltfGG~D~~~I~t~~~~~~~~~~l~~f~~ia~~l~~i~~~n~~~n~yK~~~~~Ky~~~~d~~g~~~vN~ 320 (411)
T d1t3ca_ 241 TNIRGTNIEEFLTFGGTDLNIITSAQSNDIYTNLLADYKKIASKLSKVQVSNPLLNPYKDVFEAKYGLDKDASGIYSVNI 320 (411)
T ss_dssp SCTTCEEHHHHHHHCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTSCCSCGGGHHHHHHHHHHTTEEECTTSCEEECH
T ss_pred HCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEH
T ss_conf 41477554000300687800048711677999999999999999888627884178999999998577657887288548
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~kF~~~y~~l~~fTE~~~~~~f~v~~r~~Y~~~y~~~~~~nlldd~iYti~eGFNi~nl~~n~~GQN~~~N~~~~~~i~~ 400 (411)
T d1t3ca_ 321 NKFNDIFKKLYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSIYNISEGYNINNLKVNFRGQNANLNPRIITPITG 400 (411)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHTCCCCSCSCSCCCEEEESCTTCTTTCBTTTBTCCGGGGGGGGGGBTTTSGGGEECCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 99999999986223344668886887776886357632255467653221467433432001367653238465346785
Q ss_pred ----------C
Q ss_conf ----------8
Q 001738 683 ----------V 683 (1019)
Q Consensus 683 ----------~ 683 (1019)
+
T Consensus 401 ~glv~~~~~~C 411 (411)
T d1t3ca_ 401 RGLVKKIIRFC 411 (411)
T ss_dssp TTHHHHHSSCC
T ss_pred CHHHHHHHHCC
T ss_conf 20588776339
|
| >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: Putative NAG isomerase YihS species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=31030.83 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~r~wL~~~~~~l~~~~~~~~~~gGF~~l~~dG~~~~~~~k~~~~~aR~~~~fs~a~~~g~~~~~~~A~~g~~f 80 (411)
T d2afaa1 1 KWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKA 80 (411)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHGGGEETTEECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 97687777899999999999864617789972346899897888772147768999999999975897799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 L~~~~~d~~~Gg~~~~~~~~~~~d~~k~~Y~~AF~l~ala~~~~~g~~~~~~~a~~~~~~l~~~~~~~~~G~~~~~~~~~ 160 (411)
T d2afaa1 81 MNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA 160 (411)
T ss_dssp TTTTTBCTTTSSBCSEECSSSEEECCEEHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT
T ss_pred HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
T ss_conf 99856767998489862699986532104889999999999988588889999999999999996075689743220555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~n~~mhl~eA~~~l~~at~d~~~~~~a~~~~~~~~~~~~~~~~~~l~E~f~~dw~~~~~~~~~~~~~~~~~ 240 (411)
T d2afaa1 161 FSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRA 240 (411)
T ss_dssp SCCBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTCCBCTTTTTTCTTCCTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 67754424467448999999999884288999999999999888765156678411112666541443301264324564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~pGH~iE~aWlll~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~d~~gg~~~~~~~~g~~~~~~k~~W~qaEa 320 (411)
T d2afaa1 241 YGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEA 320 (411)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSSCCEEHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 33474138899999999999973134567299999999999999985726578980584015899967777455599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 i~a~l~ly~~tgd~~yl~~a~~~~~~~~~~f~D~~~G~W~~~l~~~g~p~~~~~~g~~~~yH~~~a~~~~~~~~~~~~~~ 400 (411)
T d2afaa1 321 MGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAP 400 (411)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCSEECTTSCBCC----CCCCCTTTHHHHTGGGSCSSSCHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH
T ss_conf 99999999866989999999999999998687999983464589997998888999987206999998615889974218
Q ss_pred ----------C
Q ss_conf ----------8
Q 001738 683 ----------V 683 (1019)
Q Consensus 683 ----------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~~~ 411 (411)
T d2afaa1 401 AVAAGLLDINA 411 (411)
T ss_dssp HHHTTCTTTTC
T ss_pred HHHCCCCCCCC
T ss_conf 88701346689
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Bni1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=31028.82 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~PkP~~klK~l~W~ki~~~~~tiW~~i~~~~~~~~~~~~~~~~~le~~F~~k~~~~~~~~~~~~~~~~~lLd~kr~qni 80 (411)
T d1ux5a_ 1 KYPRPHKKLKQLHWEKLDCTDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAREIKSLASKRKEDLQKITFLSRDISQQF 80 (411)
T ss_dssp CCCCCSSCBCCCCCCCCSSCCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSSCCHHHHHHHHHTTTSBCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 96989999989776159998988200204410036788663099999986447777776666666662001767899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~I~L~~~~~~s~~~i~~ai~~~d~~~l~~~~l~~ll~~~~~~~~~~~~l~~~lPt~eE~~~l~~~~~~~~~~~d~~~L~~ 160 (411)
T d1ux5a_ 81 GINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNLARNYAPYSTDWEGVRNLEDAKPPEKDPNDLQR 160 (411)
T ss_dssp HHHTGGGTTSCHHHHHHHHHTTTHHHHTCHHHHHHTTCHHHHCCCHHHHHHTGGGCCCCTTCCCGGGCCCCSSCSTTBCH
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCH
T ss_conf 89998706999999999998368542487899999830210134799999817993789999999851445478454387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Eqf~~~l~~~~i~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~lL~~iL~~GN~lN~g~~~A~GF 240 (411)
T d1ux5a_ 161 ADQIYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSKQAQGF 240 (411)
T ss_dssp HHHHHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGGCCSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999862334499999999999999999999999999999999999957679999999999860625899871235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 kL~sL~kL~d~Ks~d~~~tLL~yiv~~~~~~~p~l~~~~~el~~v~~a~~~~~~~l~~~~~~L~~~l~~i~~~~~~~~~~ 320 (411)
T d1ux5a_ 241 KLSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLS 320 (411)
T ss_dssp CGGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTT
T ss_pred EHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 23898876521179998018999999999869075332877888998861899999999999999999999999862025
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfGEd~~~~~~~~~fF~~~~~F~~~~~~a~~en~~ 400 (411)
T d1ux5a_ 321 DSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLA 400 (411)
T ss_dssp CTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40002511169999999999999999999999999999999999983899888789999999999999999999999999
Q ss_pred ----------C
Q ss_conf ----------8
Q 001738 683 ----------V 683 (1019)
Q Consensus 683 ----------~ 683 (1019)
.
T Consensus 401 ~~e~e~~~~k~ 411 (411)
T d1ux5a_ 401 AEEEERLYIKH 411 (411)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
T ss_conf 99999987209
|
| >d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome p450 152a1 (Bs-beta) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=31023.50 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 p~~~~~~~~l~~~~~~~~f~~~~~~kyg~~if~~~~~g~~~vvv~~pe~i~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (411)
T d1izoa_ 1 PHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQ 80 (411)
T ss_dssp CBCCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCC
T ss_conf 98997014999997799999999999799769999889528999799999999769997113777287777644899645
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~dg~~h~~~R~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~l~~~v~~~~~g~~~~~~~~~~~~~~ 160 (411)
T d1izoa_ 81 GMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADD 160 (411)
T ss_dssp GCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 77808999999999873199999999999999999999985425751299999999998888874887647999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~k~~~a~~~~~~~~~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ag~~ 240 (411)
T d1izoa_ 161 FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV 240 (411)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999876321310399999999999999999998621224586322899999986751775311013456665320332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 tts~~l~~~l~~L~~~P~vq~kl~~e~~~~l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~ipkgt~V~~~~~~~~~dp 320 (411)
T d1izoa_ 241 AISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDP 320 (411)
T ss_dssp THHHHHHHHHHHHHHSTHHHHHHHTCCHHHHHHHHHHHHHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 30288999999987310123221001330499999999986503322344333334431043464221101355530442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~p~~F~PeR~~~~~~~~~~~~pFg~G~~~~~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~ 400 (411)
T d1izoa_ 321 RLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPE 400 (411)
T ss_dssp TTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCC
T ss_conf 00899562186535899999776479899899988088439999999999999999826898179986887255377568
Q ss_pred ----------C
Q ss_conf ----------8
Q 001738 683 ----------V 683 (1019)
Q Consensus 683 ----------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~Rr 411 (411)
T d1izoa_ 401 SGFVMSGIRRK 411 (411)
T ss_dssp TCCEEEEEEEC
T ss_pred CCCEEEEEECC
T ss_conf 99079988693
|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=30958.68 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~wwp~~~~~~~l~~~~~~~~p~~~~f~y~~~~~~ld~~a~~~d~~~l~~~s~~wwpaD~G~ygP~lVRl 80 (410)
T d2ccaa1 1 MKYPVEGGGNQDWWPNRLNLKVLHQNPAVADPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRM 80 (410)
T ss_dssp CCCGGGTCCGGGTSTTCCCGGGGSCSCGGGCTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 98987899766628644587555148877899999862899986269999999999998544335765456633001100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 AWHsAGTYR~~DgRGGanGg~iRfaPe~sWp~N~~LdkAr~LL~piK~ky~~~iS~ADLi~LAG~vAiE~mGg~~i~f~~ 160 (410)
T d2ccaa1 81 AWHAAGTYRIHDGRGGAGGGMQRFAPLNSWPDNASLDKARRLLWPVKKKYGKKLSWADLIVFAGNCALESMGFKTFGFGF 160 (410)
T ss_dssp HHHHHTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHTTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCB
T ss_pred HHHHHCEEECCCCCCCCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEECCEECCCCCCCCC
T ss_conf 22331301212677899877466541115312231899999988888760546567660336350210141255112455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 GR~D~~~~~~~~~g~~~~~~~~~R~~~~~el~d~l~~~~m~li~~np~g~~g~pd~~~~a~~lRd~f~rMglnD~E~VAL 240 (410)
T d2ccaa1 161 GRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAAL 240 (410)
T ss_dssp CCCCCSSCCCCCCCSCSSTTCCCCEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 54435544200378866377899857632456754444458767787534689871017999999998706871766533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 iaGgHtlGk~Hg~~~~~~~g~~p~~a~~~~~G~g~~~~~~~~~~~~~~~sG~eg~WT~~P~~~dN~yF~~Ll~~~we~~k 320 (410)
T d2ccaa1 241 IVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTK 320 (410)
T ss_dssp HHHHHTSCCCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEE
T ss_pred HCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECC
T ss_conf 12421113346788734257784658702157755688787778555367865547668514535777541356515214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 sp~g~~qw~~~d~~~~~~~pda~~~~~~~~~ml~tDlaL~~Dp~~r~iae~ya~d~d~F~~dFa~AW~KL~hrDmgp~~r 400 (410)
T d2ccaa1 321 SPAGAWQYTAKDGAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVAR 400 (410)
T ss_dssp CTTSCEEEEEGGGTTTTCBCCTTSCCCBCCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGG
T ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 45655310355777777777776776678764226677520987899999997099999999999999986125796342
Q ss_pred ---------C
Q ss_conf ---------8
Q 001738 683 ---------V 683 (1019)
Q Consensus 683 ---------~ 683 (1019)
.
T Consensus 401 ~~g~~~p~e~ 410 (410)
T d2ccaa1 401 YLGPLVPKQT 410 (410)
T ss_dssp CBSTTCCSCC
T ss_pred CCCCCCCCCC
T ss_conf 0689999889
|
| >d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30955.45 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~v~s~~~~y~~~~i~~~y~y~~t~v~~~~~g~~~v~p~~~~~~f~t~~~~p~klGVmlVG~GGnngTT~~aGv~An 80 (410)
T d1p1ja1 1 ITSVKVVTDKCTYKDNELLTKYSYENAVVTKTASGRFDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLAN 80 (410)
T ss_dssp CCEEEECCTTEEEETTEEEEEEEEEEEEEEECTTSEEEEEEEEEEEEEEEECCCCSSEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCCEEEECCCEEECCCEEEEEEEECCEEEEECCCCEEEEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 96569828980773411799988510389976897089987567789994256786478998417852899999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 k~gl~w~tk~G~~~pny~GSltq~stirlG~~~~g~~~~~p~kd~lPl~~p~DiVfGGWDI~~~nl~eAa~rA~VLd~~l 160 (410)
T d1p1ja1 81 KHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLEYDL 160 (410)
T ss_dssp HTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGEEEEEECSSCCCHHHHHHHHTCSCHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCEEEECEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHH
T ss_conf 62786333556546763230210031431455788845663776188898412789245699988999998769999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~ql~~~L~~i~P~psV~~~dfiaanq~~ra~nvi~~d~~~~~~~~sk~e~ve~Ir~DIr~Fk~~n~lDrVVVlWtASTE 240 (410)
T d1p1ja1 161 QQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQNFKEENALDKVIVLWTANTE 240 (410)
T ss_dssp HHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHHHHHHHHHHHHHTTCSCEEEEECSCCC
T ss_pred HHHHHHHHHCCCCCCCEECCHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 99999998638634320060555212112102322456545546655899999999999999987389748999458887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 r~~~~~p~v~~t~e~l~~ai~~n~~eIsPS~lYA~AAI~eG~pyvNgsPq~t~vPal~eLA~~~gv~iaG~DfKdslLA~ 320 (410)
T d1p1ja1 241 RYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKDSLLAT 320 (410)
T ss_dssp CCCCCCTTTTSSHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 68888832124399999887559987787999999999739984468864456579999984279458715124322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 pli~dL~vl~e~~trI~~~~dg~vl~d~~~f~~~~~Vls~Lsyl~KAPl~p~g~~vvnal~~Qr~~len~~ra~~Gl~p~ 400 (410)
T d1p1ja1 321 PLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQ 400 (410)
T ss_dssp HHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGGGGGGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999887650368621765457622162153089898887538989999965016888999999999997289986
Q ss_pred ---------C
Q ss_conf ---------8
Q 001738 683 ---------V 683 (1019)
Q Consensus 683 ---------~ 683 (1019)
.
T Consensus 401 ~~m~le~~l~ 410 (410)
T d1p1ja1 401 NELRFEERLL 410 (410)
T ss_dssp CCCCHHHHCC
T ss_pred CCCEEEEECC
T ss_conf 6651146329
|
| >d1kfsa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30953.45 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~g~~~~~~~iE~~~~~~la~Me~~Gi~vD~e~l~~~~~~~~~~~~~l~~~~~~~~g~~fn~~S~~ql~~~Lf~~lgl~~ 80 (410)
T d1kfsa2 1 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKP 80 (410)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCBCBCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCSCTTTTSHHHHTTTSSCSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 99689999999988999999999739898899999999999999999999999995990899999999999997429998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~t~~g~~~t~~~~L~~~~~~~~~~~~l~~~r~~~k~~~~~~~~~~~~~~~~~gri~~~~~~~gt~TGR~s~s~pnlQn 160 (410)
T d1kfsa2 81 LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQN 160 (410)
T ss_dssp CCCCC----TTTCCHHHHHTTTCHHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSSBCCEEESSCCSSSCCEEESSCGGG
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCCCC
T ss_conf 76478898554055410112223899999999999999887652433125778995412575124200232136863035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~P~~~~~~~~iR~~fia~~G~~lv~~D~sqiE~Rv~A~ls~D~~l~~~~~~g~D~h~~~A~~~~~~~~~~~~~~~R~~aK 240 (410)
T d1kfsa2 161 IPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAK 240 (410)
T ss_dssp SCSSSHHHHHHHTTBBCCTTEEEEEEEETTHHHHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHTTCCTTTCCHHHHHHHH
T ss_pred CCCCCCCCHHHHHEEECCCCCEEEEECHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHH
T ss_conf 78887423255632736999779985545384443444676224788885265067641999819973210220043320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~g~~YG~G~~~la~~l~~s~~eA~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~v~t~~Grr~~~~~~~~~~~~~r~~ 320 (410)
T d1kfsa2 241 AINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAA 320 (410)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCCTTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECTTTTCSSHHHHHH
T ss_pred HEEEEHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf 31230141356778998809899999999999988787846899999999997595530368503699754405878888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~r~a~N~~iQg~aadi~k~a~~~i~~~l~~~~~~~~~v~~VHDEiv~ev~~~~~~~~~~~i~~~M~~~~~~~vPl~~e~ 400 (410)
T d1kfsa2 321 AERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEV 400 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEETTEEEEEEETTTHHHHHHHHHHHHHHSSCSSSCCCEEE
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 88888652013389999999999999999852899889998453258998389999999999999846456898468320
Q ss_pred ---------C
Q ss_conf ---------8
Q 001738 683 ---------V 683 (1019)
Q Consensus 683 ---------~ 683 (1019)
.
T Consensus 401 ~~g~~w~e~h 410 (410)
T d1kfsa2 401 GSGENWDQAH 410 (410)
T ss_dssp EEESBHHHHC
T ss_pred CCCCCHHHHC
T ss_conf 5628868829
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=100.00 E-value=0 Score=30951.54 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~ 80 (410)
T d1uuqa_ 1 EHFVRVNGGHFELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNG 80 (410)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSS
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99879989999999989999999317765566567879999999999999977995999687366545555568776554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1uuqa_ 81 FGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQE 160 (410)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 33245889999999999999739856874034556657754465312477767655555553335665300368999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~ 240 (410)
T d1uuqa_ 161 YRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGS 240 (410)
T ss_dssp HHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf 99999999986546666765577067666533665776676543320346677777775455408995576424566666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~ 320 (410)
T d1uuqa_ 241 VNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYA 320 (410)
T ss_dssp TTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCGGGCCC
T ss_pred CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 44321013440477655688612754446555433322222015666778888888876249976650255656788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~d~~~~~~ 400 (410)
T d1uuqa_ 321 MDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTIAI 400 (410)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTTSSCEETTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHH
T ss_conf 76468999999999999999999828998999995416878888887778779987798985347348998899748899
Q ss_pred ---------C
Q ss_conf ---------8
Q 001738 683 ---------V 683 (1019)
Q Consensus 683 ---------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~~ 410 (410)
T d1uuqa_ 401 MKEFNARFQP 410 (410)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHCCC
T ss_conf 9999974197
|
| >d1s5ja1 c.55.3.5 (A:40-449) Exonuclease domain of family B DNA polymerases {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=30950.78 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~ll~~~Y~~~~~~~vi~~~g~~~~~~~v~~~~~gf~PYFyv~~~~~~~~~~~~~~~~~~~~~~e~v~k 80 (410)
T d1s5ja1 1 EWLEEAQENKIYFLLQVDYDGKKGKAVCKLFDKETQKIYALYDNTGHKPYFLVDLEPDKVGKIPKIVRDPSFDHIETVSK 80 (410)
T ss_dssp CCSCBCCTTCEEEEEEEEEETTTTEEEEEEEETTTTEEEEEECCSCCCCEEEESSCHHHHTTCHHHHTCTTEEEEEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 97655456875899986886329989999974269938999968896530899888216899998764236561799997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~ki~~~~p~~v~~~r~~~~~~~EadI~~~~RfliD~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (410)
T d1s5ja1 81 IDPYTWNKFKLTKIVVRDPLAVRRLRNDVPKAYEAHIKYFNNYMYDIGLIPGMPYVVKNGKLESVYLSLDEKDVEEIKKA 160 (410)
T ss_dssp ECTTTCCEEEEEEEEESSHHHHHHHTTSSSCEESCSSCHHHHHHHHHTCCTTSEEEEETTEEEECCCCCCHHHHHHHHHH
T ss_pred EECCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 71237853069999982899999999874654013668421179994886635899558743334555672011010133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~lsfDIE~~~~~~~~fP~p~~~~~~ii~I~~~~~~~~~~v~~~~~~~~~~~~~ 240 (410)
T d1s5ja1 161 FADSDEMTRQMAVDWLPIFETEIPKIKRVAIDIEVYTPVKGRIPDSQKAEFPIISIALAGSDGLKKVLVLNRNDVNEGSV 240 (410)
T ss_dssp TTTSCHHHHHHHHHHTHHHHSCCCCCCEEEEEEEECCSSSSCCCCTTTCCSCEEEEEEEETTSCEEEEEECSSCCCCCCE
T ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 34443000000011354333689984199999997878889897953367549999998165878999981677766544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~v~~~~sE~eLL~~F~~~i~dpDii~GyN~~~FD~pyL~~Ra~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (410)
T d1s5ja1 241 KLDGISVERFNTEYELLGRFFDILLEYPIVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKF 320 (410)
T ss_dssp EETTEEEEEESSHHHHHHHHHHHHTTCSEEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEECCE
T ss_conf 67980999978999999998754316666898435688689999999995996321531104741016855458976062
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~d~~~~~~~~~~l~sy~Ld~Va~~~Lg~~K~d~~~~~~~~~~~~l~~Y~~~D~~L~~~L~~~~~~~~l~~~~~~s~i~ 400 (410)
T d1s5ja1 321 FFNKAVRNYAFEGKYNEYNLDAVAKALLGTSKVKVDTLISFLDVEKLIEYNFRDAEITLQLTTFNNDLTMKLIVLFSRIS 400 (410)
T ss_dssp HTSHHHHHHTSTTCCSSCSHHHHHHHHHCCCCC--SSCTTTCCHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62148998752358788987999999869695567776565897999886099999999998652588899999999985
Q ss_pred ---------C
Q ss_conf ---------8
Q 001738 683 ---------V 683 (1019)
Q Consensus 683 ---------~ 683 (1019)
+
T Consensus 401 ~~plddv~r~ 410 (410)
T d1s5ja1 401 RLGIEELTRT 410 (410)
T ss_dssp CCCHHHHTTS
T ss_pred CCCHHHCCCC
T ss_conf 9798980479
|
| >d2cmza1 e.76.1.2 (A:1-409) Spike glycoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Viral glycoprotein ectodomain-like superfamily: Viral glycoprotein ectodomain-like family: Spike glycoprotein-like domain: Spike glycoprotein species: Vesicular stomatitis indiana virus [TaxId: 11277]
Probab=100.00 E-value=0 Score=30881.28 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~iv~p~~~~~~W~~v~~~~l~CP~~~~~~~~~~~~~~~~~~~~p~~~t~~kv~G~~Chk~~w~ttC~~~wyg~~~it~ 80 (409)
T d2cmza1 1 KFTIVFPHNQKGNWKNVPSNYHYCPSSSDLNWHNDLIGTAIQVKMPKSHKAIQADGWMCHASKWVTTCDFRWYGPKYITQ 80 (409)
T ss_dssp CEEEEEECSCCCCCEECCTTCCCCGGGGCTTTCCSCEEEEEEEEEECCCSCCEECEEEEEEEEEEEEEEECTTSCEEEEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCEEEEEEEEEEEEEEEEECCEEEEE
T ss_conf 97689168888888237711244999745467786245558998103566336552798655899998746307558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~i~~~~pt~~~C~~ai~~~~~G~~~~p~fPp~~C~w~tv~t~e~~~i~i~ph~V~lDpY~~~~~D~~F~gGkCs~~~C~T 160 (409)
T d2cmza1 81 SIRSFTPSVEQCKESIEQTKQGTWLNPGFPPQSCGYATVTDAEAVIVQVTPHHVLVDEYTGEWVDSQFINGKCSNYICPT 160 (409)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTCCCCCCSCCCCCCTTSEEEEEEEEEEEEECCEEEETTTTEEECTTBGGGEECSSEEEB
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCC
T ss_conf 99974499899999998876587258989985515631211037999996455325377882746757999668970677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~h~~tiWi~d~~~~~~C~~~~~~~~i~~~~~~gk~~s~g~~~~g~~~~~~~~~~~~gACkl~fCG~~GIRl~~GeWv~i~ 240 (409)
T d2cmza1 161 VHNSTTWHSDYKVKGLCDSNLISMDITFFSEDGELSSLGKEGTGFRSNYFAYETGGKACKMQYCKHWGVRLPSGVWFEMA 240 (409)
T ss_dssp SSSSCEEEESSCHHHHHGGGEEEEEEEEEESSCCGGGTTCSSCEEEETTEEEEECTTCEEEEETTEEEEECTTSBEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEECCCCCEEEEE
T ss_conf 67861661577666501355301211684255600014653038983785545778831254348754687798589986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~p~C~~~~~v~~~~~~~~~~~~~~~~e~~~~~~~Cl~tl~ki~~~~~iS~~dLSyL~p~~PG~G~AY~i~n 320 (409)
T d2cmza1 241 DKDLFAAARFPECPEGSSISAPSQTSVDVSLIQDVERILDYSLCQETWSKIRAGLPISPVDLSYLAPKNPGTGPAFTIIN 320 (409)
T ss_dssp CHHHHHHTTCCBCCTTCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHTTSCCSSEEEEEEEEET
T ss_pred CCCCCEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 66641002577799998655036775166778999877879998999999974798775555420567999864379989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 gtL~~~~~~Y~~v~~~~~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~G~NG~~~~~~~~~~p~~~~~~~~~d~~l~~~~ 400 (409)
T d2cmza1 321 GTLKYFETRYIRVDIAAPILSRMVGMISGTTTERELWDDWAPYEDVEIGPNGVLRTSSGYKFPLYMIGHGMLDSDLHLSS 400 (409)
T ss_dssp TEEEEEEEEEEEEEESSSEESSSEEEETTSCCEEECCCCCEEETTEEECGGGCEEETTEEECCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCEEEEECCEEEECHHHHCCCCHHHHHHHHH
T ss_conf 94897668999998226653332564477774542244646868844466526985994895656711520034444440
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 ~~~~~~HPh 409 (409)
T d2cmza1 401 KAQVFEHPH 409 (409)
T ss_dssp CCEECCCCC
T ss_pred CCCCCCCCC
T ss_conf 267678999
|
| >d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Plasmodium falciparum [TaxId: 5833]
Probab=100.00 E-value=0 Score=30879.03 Aligned_cols=1 Identities=0% Similarity=-1.590 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~y~~~~~~~l~~l~pe~ah~~~~~~l~~~~~~~~~~~~~~~L~~~v~Gl~f~NPiglAAG~dk~~~~i~~~ 80 (409)
T d1tv5a1 1 FESYNPEFFLYDIFLKFCLKYIDGEICHDLFLLLGKYNILPYDTSNDSIYACTNIKHLDFINPFGVAAGFDKNGVCIDSI 80 (409)
T ss_dssp CCTTSTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTCSCCCCSCCCGGGCEEETTEEESSSEEECTTTTTTCSSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHH
T ss_conf 98778326789999999852599899999999999735777534677744466788764489687560668788999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~lGfG~ve~gTvT~~p~~GNp~PR~~r~~~~~~liN~~Gl~n~G~~~~~~~l~~~~~~~~~~~~~~~~i~gi~~~~~~~ 160 (409)
T d1tv5a1 81 LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKD 160 (409)
T ss_dssp HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTT
T ss_pred HHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 86688769951023035647897322345433321024677763589999987777654430566654300231454420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~aD~~elNiScPNt~glr~~~~~~~L~~ll~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (409)
T d1tv5a1 161 TVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKN 240 (409)
T ss_dssp CSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 15788877999998850143100010265433442456889999999999999875301222221111111001111000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ppi~vKlsPd~~~~~i~~i~~~~~~~g~dgii~~Nt~~~~~~~~~~~~~~GGlS 320 (409)
T d1tv5a1 241 NFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS 320 (409)
T ss_dssp ----------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11222222110000000110123567865998589987024688999988606541011322225555334234677643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 G~~l~~~al~~v~~v~~~~~~~ipIIGvGGI~s~~Da~e~i~AGAs~VQv~T~li~~Gp~~v~~I~~~L~~~l~~~g~~~ 400 (409)
T d1tv5a1 321 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYN 400 (409)
T ss_dssp EHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 10178899999999999708996099989979999999999849978763067871192899999999999999829998
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 i~e~iG~~h 409 (409)
T d1tv5a1 401 LKEAIGRKH 409 (409)
T ss_dssp SGGGTTTTC
T ss_pred HHHHCCCCC
T ss_conf 999539889
|
| >d1qtma2 e.8.1.1 (A:423-831) DNA polymerase I (Klenow fragment) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Thermus aquaticus [TaxId: 271]
Probab=100.00 E-value=0 Score=30877.63 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~l~~~y~~lE~~l~~vl~~me~~Gi~vD~~~l~~~~~~~~~~~~~l~~~~~~~~g~~fN~~S~~ql~~~L~~~l~l~~ 80 (409)
T d1qtma2 1 EERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPA 80 (409)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 90789999999968999999999729284899999999999999999999999995991899999999999999739997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~g~~~~~~~~l~~l~~~~~~~~~~~~~~~~~kl~~~~~~~~~~~~~~~~grih~~~~~~gt~TGR~ss~~pnlq 160 (409)
T d1qtma2 81 IGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQ 160 (409)
T ss_dssp CCBCTTTCCBCCCHHHHHHTTTTCTHHHHHHHHHHHHHHHHHTTTTGGGGBCTTTSEECCEEESSCCSSSCCEEESSCCS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 66656678755323368887421168999999889988888878778775038899163144556666665466650120
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~p~~~~~~~~~R~~f~a~~G~~lv~aD~sqiElRvlA~ls~D~~l~~~~~~g~D~~~~~a~~~~~~~~~~v~~~~R~~a 240 (409)
T d1qtma2 161 NIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAA 240 (409)
T ss_dssp SCCCSSHHHHHHHTTEECCTTEEEEEEEETTHHHHHHHHHHCCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHCCCCCEEECHHHHHHH
T ss_conf 25410014454100555789968998530236324688860674411110157620101012212764223140676667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 K~~~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~v~t~~Gr~~~~~~~~~~~~~~~~ 320 (409)
T d1qtma2 241 KTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVRE 320 (409)
T ss_dssp HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSCHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 76410123576334566665442778999999998864235677788999887627233235653332100001254432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~N~~iQg~aAdi~k~a~~~~~~~l~~~~~~iv~~VHDEiv~ev~~~~a~~~~~~i~~~M~~~~~l~vPl~~e~~ 400 (409)
T d1qtma2 321 AAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVG 400 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEEEEEEETTTHHHHHHHHHHHHHTSSCCSSCCCEEEE
T ss_pred HHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 20200121320399999999999999999886699899974413499987789999999999998603268997786621
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 ig~~W~e~k 409 (409)
T d1qtma2 401 IGEDWLSAK 409 (409)
T ss_dssp EESBHHHHC
T ss_pred ECCCHHHCC
T ss_conf 558967749
|
| >d2g0da1 a.102.6.1 (A:7-415) Nisin biosynthesis protein NisC {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: LanC-like family: LanC-like domain: Nisin biosynthesis protein NisC species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30875.65 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~sLy~G~~GiaL~l~~l~~~t~~~~~~~~a~~~l~~~~~~~~~~~~~~~g 80 (409)
T d2g0da1 1 KKNIKRNVEKIIAQWDERTRKNKENFDFGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGS 80 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHHC-----CGGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 95188999999985566530365569989983238779999999999886498789999999999999998607998863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 lf~G~~Gi~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~D~l~G~aG~~~~LL~~~~~~~~~~~~ 160 (409)
T d2g0da1 81 LYSGAAGIALSILHLREDDEKYKNLLDSLNRYIEYFVREKIEGFNLENITPPDYDVIEGLSGILSYLLLINDEQYDDLKI 160 (409)
T ss_dssp TTTSHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHSSSSSHHHHHHHHTTCCCGGGHHHHH
T ss_pred EECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHH
T ss_conf 00787999999999986050356899999999999999999874402367766212226188999999833222407899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~sGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (409)
T d2g0da1 161 LIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYE 240 (409)
T ss_dssp HHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999997413554333454445552200036778776426550799999999998843788218999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~la~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 320 (409)
T d2g0da1 241 KFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRKLGIDS 320 (409)
T ss_dssp HHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 98642335688987676531123334456766655437884679999999998719889999999999999983548998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~LCHG~aG~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~G~aGi~~~Ll~~~~~~~~~~W~~~~L 400 (409)
T d2g0da1 321 YMICHGYSGLIEICSLFKRLLNTKKFDSYMEEFNVNSEQILEEYGDESGTGFLEGISGCILVLSKFEYSINFTYWRQALL 400 (409)
T ss_dssp CCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHHHHTHHHHHHSCCSTTCSSTTTSHHHHHHHHHHHHSCCCSSCGGGGGT
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHC
T ss_conf 93568689999999999988488799999999999888743467899997244169999999998268999987112110
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~~ 409 (409)
T d2g0da1 401 LFDDFLKGG 409 (409)
T ss_dssp CCTTTTTCC
T ss_pred CCCCCCCCC
T ss_conf 456234488
|
| >d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Formaldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=30874.68 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 D~e~~~~~~~~~~~~i~~~~~~~~~~~~GT~~~~~~~~~~g~lP~rNf~~g~~~~a~~isge~~~~~~~~~~~C~~Cpi~ 80 (409)
T d1b25a1 1 DKEELKKLSQEAYNEILNSPGYPFWKRQGTMAAVEWCNTNYALPTRNFSDGYFEFARSIDGYTMEGMKVQQRGCPYCNMP 80 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTHHHHHHHGGGGHHHHHHHTTCSCBTTTTBSCCTTGGGGSHHHHHHHEEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 98999999999999987194176788368599999998759968177878878873445899998775127888999678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 C~~~~~~~~g~~~gpEYEt~~~~Gs~~gi~D~~~v~~~n~lcd~~GlDtIs~G~~ia~amE~~e~Gll~~~~~~Gd~e~~ 160 (409)
T d1b25a1 81 CGNVVLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVMEAVERGILKEGPTFGDFKGA 160 (409)
T ss_dssp CEEEEECTTSCEEEECHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSSSSCCTTCHHHH
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 88358728987078536479887660289999999999999998687456450599999999977999866667886999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~ll~~Ia~r~GeiG~~La~G~~~aae~~G~~~~a~~vKG~e~p~~dpR~~~g~~l~yats~rGa~H~~~~~~~~~~~~~ 240 (409)
T d1b25a1 161 KQLALDIAYRKGELGNLAAEGVKAMAEKLGTHDFAMHVKGLEVSGYNCYIYPAMALAYGTSAIGAHHKEAWVIAWEIGTA 240 (409)
T ss_dssp HHHHHHHHTTCHHHHHHHTTCHHHHHHHHTCGGGCCEETTEECCSCCCTTCHHHHHHHHHCTTSSCSTTCCCHHHHHTCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
T ss_conf 99999998667857899973399999994982321020777666527763024666551246787045533220331357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dslg~C~F~~~~~~~~~e~~~~~l~avTG~~~t~eel~~~GeRi~ 320 (409)
T d1b25a1 241 PIEGEKAEKVEYKISYDPIKAQKVVELQRLRGGLFEMLTACRLPWVEVGLSLDYYPKLLKAITGVTYTWDDLYKAADRVY 320 (409)
T ss_dssp TTC--------CCCCCCTHHHHHHHHHHHHHTTHHHHHTCCSHHHHHHCCCTTHHHHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 41110123312345678078999999999999999860404552214577899999999984388999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~L~R~fN~r~G~~~~~~~dD~lP~r~~~ep~~~Gp~~G~~~d~~~~e~~l~~YY~~rGWde~G~Pt~e~L~~LgL~~v~~ 400 (409)
T d1b25a1 321 SLIRAYWVREFNGKWDRKMDYPPKRWFTEGLKSGPHKGEHLDEKKYDELLSEYYRIRGWDERGIPKKETLKELDLDFVIP 400 (409)
T ss_dssp HHHHHHHHHHTTTCCCGGGGCCCTHHHHCCCSSSTTTTCCCCHHHHHHHHHHHHHHHTBCTTSCBCHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHH
T ss_conf 99999998606679983427797154118887787578868999999999999997399988846999999879966899
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 ~l~~~~~~~ 409 (409)
T d1b25a1 401 ELEKVTNLE 409 (409)
T ss_dssp HHHTTSCCC
T ss_pred HHHHHHCCC
T ss_conf 999986169
|
| >d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini [TaxId: 2094]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Arginine deiminase domain: Arginine deiminase species: Mycoplasma arginini [TaxId: 2094]
Probab=100.00 E-value=0 Score=30874.44 Aligned_cols=1 Identities=100% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~v~SE~g~Lk~V~vhrPg~e~~~l~P~~~~~~lfd~~~~~~~a~~Ehd~f~~~L~~~Gv~V~~l~~ll~e 80 (409)
T d1s9ra_ 1 SVFDSKFKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAE 80 (409)
T ss_dssp CCSCTTCCSCBBCCSSSCEEEEEECCCCGGGGGCCGGGHHHHTCSSCCCHHHHHHHHHHHHHHHHTTTCEEEEHHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHH
T ss_conf 93113778641577700131799769848987269311577514777799999999999999999789889983786876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~g~~~~e~~~~~~~~~~~~plpn~~F~RD 160 (409)
T d1s9ra_ 81 TYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRD 160 (409)
T ss_dssp HHHHSCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHTCSSHHHHHHHHHHCEEHHHHTCCCSSSEEECCCGGGGCTTS
T ss_pred HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHCCC
T ss_conf 55407999999999863101134454768888999986048889999988524515442555676334678755200057
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~gvil~~m~~~~R~~E~~~~~~i~~~~~~~~~~~~~~~~~~~~~~EGGD~l~~g~~~~~iG~s~RTn~~gie~L 240 (409)
T d1s9ra_ 161 PFASVGNGVTIHYMRYKVRQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVSERTDLQTVTLL 240 (409)
T ss_dssp SEEEEBTEEEECCCSSHHHHTTHHHHHHHHHHCTTTTTCCEEECGGGCSCCCGGGEEECSSSEEEEEESSSCCHHHHHHH
T ss_pred CEEEECCCEEECCCCCHHHCCCHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHH
T ss_conf 43687486897899984665477999999984844349855972687664556747998996799997876798999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~L~~~~~~~~~~v~~~~~p~~~~~mHLDt~f~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (409)
T d1s9ra_ 241 AKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQS 320 (409)
T ss_dssp HHHHHHCTTCCCCEEEEEECCCBTTBCSGGGTEEECSSSEEEECGGGTTTCEEEEEETTTSCSSCCCEEECCCHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECCCCCCCCEEECCCEEECCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99863447712689875047886552233560243279849982543564220012203676654101210338999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~i~~~~~~~~~~~~~~E~~~~~~N~L~l~p~~Vi~~~~~~~~~~~L~~~Gievi~i~~~el~~~gGg~hCmT~ 400 (409)
T d1s9ra_ 321 IINKKPVLIPIAGEGASQMEIERETHFDGTNYLAIRPGVVIGYSRNEKTNAALEAAGIKVLPFHGNQLSLGMGNARCMSM 400 (409)
T ss_dssp HHSSCCEEEETTCTTCCHHHHHHHHHTTTTCCEEEETTEEEEETTCHHHHHHHHHTTCEEEEECCHHHHTTSCCTTTTCE
T ss_pred HHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHCCCEEEEECHHHHHCCCCCCEECCC
T ss_conf 74799808984688764566655540574049997799899858869999999978899999673785327998777870
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 pl~Re~v~~ 409 (409)
T d1s9ra_ 401 PLSRKDVKW 409 (409)
T ss_dssp EEEECCCCC
T ss_pred CCEECCCCC
T ss_conf 345279899
|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30871.17 Aligned_cols=1 Identities=100% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~p~~~L~~V~il~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~G~LT~~G~~q~~~lG~~lr~~Y~~~~~~~~~~~~~~~ 80 (409)
T d1dkla_ 1 SEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSG 80 (409)
T ss_dssp CCSCEEEEEEEEEEECCCBCCCCCCHHHHHTCSSCCCCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCCCTT
T ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99888898999997188899999866557688433557999930526999999999999999998774367887778712
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~i~vrSt~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1dkla_ 81 QVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQT 160 (409)
T ss_dssp TEEEEECSSHHHHHHHHHHHHHHSTTCCCCEECCSCTTSCCGGGCTTTTTSSCCCHHHHHHHHHHHTTSSHHHHHHTTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 06987279729999999999852788676655445556667566777577667536777789987745647778899889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~p~~~~~~~~~ 240 (409)
T d1dkla_ 161 AFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSH 240 (409)
T ss_dssp HHHHHHHHHTGGGSHHHHTC-----CCCHHHHSCCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCSSGGGGTCCSHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHH
T ss_conf 99999999721121037877510037889999899988640477767726667659999999998599972110357799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~k~~l~s~HD~ti~~ll~aLgl~~~~~ 320 (409)
T d1dkla_ 241 QWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLP 320 (409)
T ss_dssp HHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHSCCCCEECGGGCEESCSEEEEEECHHHHHHHHHHHTCCCCBT
T ss_pred HHHHHHHHHHHHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf 99999999998650005887899873668999999999876404555678888638999568414999999819853456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~p~as~~~~El~~~~~~~~~~vrv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~~~C~l~~F~~~~~ 400 (409)
T d1dkla_ 321 GQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVN 400 (409)
T ss_dssp TBSCSSCTTCEEEEEEEEETTTTEEEEEEEEEECCHHHHHTTCCCCSSSCCEEEECCCTTCCCBCTTSCEEHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66899997663899999846999725999995376201245665201025775046479998889999368999999999
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
.
T Consensus 401 ~~~~p~c~~ 409 (409)
T d1dkla_ 401 EARIPACSL 409 (409)
T ss_dssp HHSCGGGCC
T ss_pred HHHHHHCCC
T ss_conf 775021279
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=100.00 E-value=0 Score=30871.90 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~k~~v~Y~~~~~~f~d~~~~~~Gd~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~ 80 (409)
T d1wzaa2 1 FEKHGTYYEIFVRSFYDSDGDGIGDLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGT 80 (409)
T ss_dssp CCCCCCEEEECGGGSCCSSSSSCCCHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCC
T ss_pred CCCCCEEEEEECCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98761799996412137999987489999975533210022277616866799798887989888684567875834599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~dlk~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (409)
T d1wzaa2 81 LEDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGY 160 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999866988998213344445673123331146553345322356444567654579853322346664466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~dln~~n~~vr~~~~~~~~~wi~~gVDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (409)
T d1wzaa2 161 FWSGMPDLNYNNPEVQEKVIGIAKYWLKQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVKPVYLVGEVWDISET 240 (409)
T ss_dssp SCTTSCBBCTTSHHHHHHHHHHHHHHHHTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTSCCEEEEECCSCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 77887620325689999999999999982987212253532166032020068999999740037880799986037521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~r~~~~~~~~~~~~~~ 320 (409)
T d1wzaa2 241 VAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDREVGFGNYIDAPFLTNHDQNRILDQLGQDRNKARV 320 (409)
T ss_dssp HGGGGTTTCSEEBCHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHTCTTSCCCBCBSCCTTSCCHHHHTTTCHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 13444202232012468999988774167521678877777766543002456556312455567310002786678999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~lt~pG~P~iy~G~E~G~~~~~~~~~~R~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~Li~l 400 (409)
T d1wzaa2 321 AASIYLTLPGNPFIYYGEEIGMRGQGPHEVIREPFQWYNGSGEGETYWEPAMYNDGFTSVEQEEKNLDSLLNHYRRLIHF 400 (409)
T ss_dssp HHHHHTTSSSCCEEETTGGGTCCCCSSHHHHTCCCCCSSSCCTTCCCSSCCTTTTTTCCHHHHTTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99999838998799558653766899986546788777788888776775555655468998863748999999999999
Q ss_pred --------C
Q ss_conf --------8
Q 001738 683 --------V 683 (1019)
Q Consensus 683 --------~ 683 (1019)
+
T Consensus 401 Rk~~pal~s 409 (409)
T d1wzaa2 401 RNENPVFYT 409 (409)
T ss_dssp HHHCTHHHH
T ss_pred HHHCCHHCC
T ss_conf 960813039
|
| >d1r76a_ a.102.5.1 (A:) Polygalacturonic acid lyase (pectate lyase) {Azospirillum irakense [TaxId: 34011]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Family 10 polysaccharide lyase family: Family 10 polysaccharide lyase domain: Polygalacturonic acid lyase (pectate lyase) species: Azospirillum irakense [TaxId: 34011]
Probab=100.00 E-value=0 Score=30802.52 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~a~~~t~ar~~~~p~~~~aAw~~y~a~s~~~~~a~~~~~~a~~~~g~~~p~~p~~~~~~~~~~l~~~~~wy~s 80 (408)
T d1r76a_ 1 AVIGMNEAASALTPSRVSSLPDTQRAAWQEYLARSEAQLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDKPAAWYTS 80 (408)
T ss_dssp CCCEECCCCCCCCHHHHSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSSCGGGGGS
T ss_pred CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 95554541011687776369878888986436665556766776666653248878999986643033671467444577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~eA~~iAd~lL~~Q~p~GGWpKn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TiDN~aTt~el~~La~ 160 (408)
T d1r76a_ 81 KAARHVADVIVSFQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQ 160 (408)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 79999999999853447998776653200110102232210134455300144555542246788686248999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~y~~a~~~~~~~ll~~Q~~~Ggwpqf~p~~~~Y~~~ItfND~~m~~~l~~l~~~~~~~~~~~~~~~~~r 240 (408)
T d1r76a_ 161 VVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIR 240 (408)
T ss_dssp HHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 99973763214699999999999997317799964437887552343112755899799999999973465344787889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~r~~~a~~rgi~~ll~~Q~~~gg~~~~Wg~Qhd~~tl~P~~aR~yE~~sls~~eS~~i~~~LM~~~~ps~~~~~aI~~av 320 (408)
T d1r76a_ 241 TRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIEAPSDAVKQAIRGGV 320 (408)
T ss_dssp HHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999987610488867486525835567344336677264003189999999717777755999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~Wl~~~~~~~~~~~~~~~~~~~~~~~~~~~lwaRfyel~tn~P~f~~Rd~~~~~~~~ei~~err~gy~w~~~~~~~~~~~ 400 (408)
T d1r76a_ 321 AWLNTSVIRDRAWVKSDQGYQLVTEQGAKPLWSRFYSLDGNKPVFGDRDKTIHDDVMGISQERRTGYAWYTTSPQKALSA 400 (408)
T ss_dssp HHHHHSCCCC---------------CCSSCCEESEECSSSCCBCEECTTSEEESCGGGSCHHHHSSSCCEESTTHHHHHH
T ss_pred HHHHHCCCCCCEEEECCCCCEEEECCCCCCCCEEEEECCCCCEEEECCCCCEECCHHHCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 99986646785355348884242089998533256775899624657998653477662097628702427776999998
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
.
T Consensus 401 y~~w~~~~ 408 (408)
T d1r76a_ 401 FTKWEKRS 408 (408)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHCC
T ss_conf 89987449
|
| >d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30802.04 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~A~~l~~dL~~~l~~~ 80 (408)
T d1c4oa1 1 TFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPEN 80 (408)
T ss_dssp CCCCCSCCCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 96214899998779999999999866997379856888789999999999859999999189999999999999864766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~~fp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVv~~~a~l~~l~~~~~~~~~~~~l~~G 160 (408)
T d1c4oa1 81 AVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVERG 160 (408)
T ss_dssp EEEECCCGGGTSCCCEEEGGGTEEECCCCSCCHHHHHHHHHHHHHHHHCSCEEEEEEGGGCSCCCCHHHHHHCCBC----
T ss_pred CEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHCEEEEECC
T ss_conf 45567753422575456845554444421034677764446555320467659995112321678818876114885179
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~l~~~L~~~gY~r~~~V~~~GefsvRG~IlDIfp~~~~~P~RIeffgDeIdsIr~Fd~~tQrs~~~~~~~~i~P 240 (408)
T d1c4oa1 161 KPYPREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIFPAYETEPIRVELFGDEVERISQVHPVTGERLRELPGFVLFP 240 (408)
T ss_dssp --------------------------------------------------------------------------CCCBCC
T ss_pred CEEEHHHHHHHHHHHHCEECCEEECCCEEEEECCCEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEC
T ss_conf 89508999999997522214305336605730671276002457637899946733268997278896567655456522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~e~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~Gie~yl~~f~~~~~~e~~~tL~ 320 (408)
T d1c4oa1 241 ATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLL 320 (408)
T ss_dssp SCSCCCCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCCTTGGGGHHHHHTCCTTSCCCCGG
T ss_pred CCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH
T ss_conf 41110135578888876566899999998737416777799999988877875188765777799865778899852466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 DYlp~~~lv~~De~~~~~~~~~~~~~e~~e~~~~lle~g~~lP~~~d~~~L~~ee~~~~~~q~i~~S~~p~~~e~~~~~~ 400 (408)
T d1c4oa1 321 DYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGR 400 (408)
T ss_dssp GGSCTTCEEEEETHHHHHHHHHHHHHHHHHHHHHHHHTTSSCGGGGGSSCCCHHHHHHTCSEEEEEESSCCHHHHHHCSE
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHCCCCC
T ss_conf 51687508999582877999999998899999868757867885434798899999985598899808998422306885
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
.
T Consensus 401 ive~~~Rp 408 (408)
T d1c4oa1 401 VVEQIIRP 408 (408)
T ss_dssp EEEECSCT
T ss_pred EEEEEECC
T ss_conf 47996088
|
| >d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30801.94 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 em~~ifs~~~~~~~~l~ve~A~a~a~~e~G~ip~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~a~~~~L~e~~g~~~~~v 80 (408)
T d1f1oa_ 1 EMSAIWTDENRFQAWLEVEILACEAWAELGVIPKEDVKVMRENASFDINRILEIEKDTRHDVVAFTRAVSESLGEERKWV 80 (408)
T ss_pred CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 94787790799999999999999999877999999999999847677999998874538858999999998738646341
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 H~G~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 160 (408)
T d1f1oa_ 81 HYGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLERF 160 (408)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 67887899998999999998488888899999999999999828860146675177777408899999999999879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~lGGA~Gt~~~~~~~~~~~~~~~lg~~~~~~~~~~~~rd~~~e~~~~l~~la~~l~kia~Dl~~~~s~~~ 240 (408)
T d1f1oa_ 161 KQAKAGIEVGKISGAVGTYANIDPFVEQYVCEKLGLKAAPISTQTLQRDRHADYMATLALIATSIEKFAVEIRGLQKSET 240 (408)
T ss_pred HHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99987650124460431346788558999999846767872278887788999987999999999987789998871344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~e~~~~~~~GSSiMP~K~NP~~~E~v~~~~~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~ 320 (408)
T d1f1oa_ 241 REVEEFFAKGQKGSSAMPHKRNPIGSENMTGMARVIRGYMMTAYENVPLWHERDISHSSAERIILPDATIALNYMLNRFS 320 (408)
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 61440366789875200035564079999987601111378998726431200304567776214009999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~l~~l~vn~e~m~~nl~~~~~~~~a~~~~~~Lv~~gl~~~~Ah~~v~~~~~~a~~~~~~l~e~l~~~~~i~~~Ls~eel 400 (408)
T d1f1oa_ 321 NIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVEAEEKITSRLSPEKI 400 (408)
T ss_pred HHHHCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHH
T ss_conf 87637865799999999730472689999999998299989999999999999999798899998706786668999999
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
.
T Consensus 401 ~~~lDp~~ 408 (408)
T d1f1oa_ 401 ADCFDYNY 408 (408)
T ss_pred HHHCCCCC
T ss_conf 98659998
|
| >d2hhva2 e.8.1.1 (A:469-876) DNA polymerase I (Klenow fragment) {Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: DNA polymerase I (Klenow fragment) species: Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
Probab=100.00 E-value=0 Score=30800.39 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~e~ll~~lE~~l~~vLa~ME~~Gi~vD~e~l~~~~~~l~~~~~~le~~i~~~~G~~fN~~S~~ql~~~Lf~~L~l~~~~ 80 (408)
T d2hhva2 1 EQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLK 80 (408)
T ss_dssp TCHHHHHTTHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHTTSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 97689999988899999999984969789999999999999999999999999699679999999999999855999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~r~~~k~~~~~~~~~~~~~~~~~gRih~~~~~~gt~TGR~s~~~Pnlqn~p~ 160 (408)
T d2hhva2 81 KTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIPI 160 (408)
T ss_dssp BCSSSBCCCHHHHHHHGGGCHHHHHHHHHHHHHHHHHTTTHHHHHHSCTTTCEECCEEESSCCSSSCCEEESSCTTCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCEECCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 58788655335677750112579999999999888886533324305089985787200357654445557632146777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~r~~~~~~~g~~lv~~DysqiElRvlA~ls~D~~l~~~~~~g~D~h~~~a~~~~~~~~~~~~~~~R~~aK~~ 240 (408)
T d2hhva2 161 RLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAV 240 (408)
T ss_dssp SSHHHHGGGGGEECSSTTEEEEEEEESSHHHHHHHHHHTCHHHHHHHHTTCCHHHHHHHHHHTCCGGGCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 64335023312113047845887220215199999994888899987744215665455404777888070677889987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~fg~~YG~g~~~l~~~~~~~~~ea~~~~~~~~~~~p~i~~~~~~~~~~a~~~g~~~~~~grrr~~p~~~~~~~~~r~~~~ 320 (408)
T d2hhva2 241 NFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAE 320 (408)
T ss_dssp HHHHHHCCCHHHHHHHHTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSEEECTTCCEEECGGGGCSSHHHHHHHH
T ss_pred HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHH
T ss_conf 61533245115546101222788999999998640116255789999999828875467984158865566676767888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 r~a~N~~iQgsaAdi~k~a~~~~~~~l~~~~~~~~lv~~VHDEiv~ev~~~~~~~~~~~~~~~M~~~~~l~vPl~~d~~i 400 (408)
T d2hhva2 321 RMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHY 400 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEECSSEEEEEEEGGGHHHHHHHHHHHHHTSSCCSSCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 87760011489999999999999999984489978999763105899778999999999999995476788807865044
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
.
T Consensus 401 G~~W~e~k 408 (408)
T d2hhva2 401 GSTWYDAK 408 (408)
T ss_dssp ESSTTTCC
T ss_pred CCCHHHCC
T ss_conf 78967759
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30798.96 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~ 80 (408)
T d1n11a_ 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 80 (408)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 98699999884899999999787899988999988999999868899999999885998877999899999999869977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~ 160 (408)
T d1n11a_ 81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 160 (408)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99999874100123211122024555430332222222211001001456464289999875989999999976998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 240 (408)
T d1n11a_ 161 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240 (408)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 78767409999998599999999986588400457789971024320210455555432001221247789999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g 320 (408)
T d1n11a_ 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320 (408)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred HCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCC
T ss_conf 08676754420022111112478997334543028489999999779965621023445302210058621355301333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~~~~ 400 (408)
T d1n11a_ 321 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRM 400 (408)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC----CCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 32234689999999999986889999999987889988799998999999983999999999998736564560003668
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
.
T Consensus 401 ~~~~~~~~ 408 (408)
T d1n11a_ 401 SFPETVDE 408 (408)
T ss_dssp CCCCCCCC
T ss_pred CCCHHCCC
T ss_conf 76410149
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30797.14 Aligned_cols=1 Identities=0% Similarity=-1.358 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~rGvNlGgWlv~E~wi~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~ 80 (408)
T d1h4pa_ 1 YYDYDHGSLGEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFA 80 (408)
T ss_dssp CCCTTSCTTSSCEEEEECTTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 96666787798325886515540466667315554256666555542209999998687889999999885328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T d1h4pa_ 81 NIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSN 160 (408)
T ss_dssp HHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHH
T ss_pred HHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99977998799854499934778887758158999999999999889989998378998776778877656645578168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~ 240 (408)
T d1h4pa_ 161 LAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDF 240 (408)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 99999999999999631345664234412567665666557789999999999998634668569980687770145554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~vv~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~~~~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~ 320 (408)
T d1h4pa_ 241 MTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWV 320 (408)
T ss_dssp SCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHHHTTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCC
T ss_pred CCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCC
T ss_conf 26677786367610223541377556775543311433344543156885243112331104441256554430104413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ye~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~~~~~~~~~ 400 (408)
T d1h4pa_ 321 NGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFEMRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTDRKYP 400 (408)
T ss_dssp BTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHTTTTEEEESCSCCSSCSTTCHHHHHHTTSSCSSTTCCSST
T ss_pred CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 67767655565446677001778899999999999999984589777852137999878889999787808896124687
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
+
T Consensus 401 ~~cg~~~~ 408 (408)
T d1h4pa_ 401 NQCGTISN 408 (408)
T ss_dssp TGGGSCCC
T ss_pred CCCCCCCC
T ss_conf 75567889
|
| >d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Probable cysteine desulfurase SufS species: Synechocystis sp. PCC 6803 [TaxId: 1148]
Probab=100.00 E-value=0 Score=30796.78 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~a~iR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llg 80 (408)
T d1t3ia_ 1 PSLAATVRQDFPILNQEINGHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN 80 (408)
T ss_dssp CCHHHHHGGGCGGGSCEETTEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96278998758256666589986983185115799999999999998668987731519999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~ 160 (408)
T d1t3ia_ 81 ARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLL 160 (408)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHC
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCC
T ss_conf 89821377505307898888764100226899889850354411211344433026825765420123320077764224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~t~lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~ 240 (408)
T d1t3ia_ 161 SEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEE 240 (408)
T ss_dssp CTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 89966999965554443358089876565214730453130104643224334678648861432357887411121033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~ 320 (408)
T d1t3ia_ 241 ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQ 320 (408)
T ss_dssp HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 45308965069854344455555557733543478578999999999999999708799999999877677665225764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~~~iv~f~~~~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L 400 (408)
T d1t3ia_ 321 LRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSL 400 (408)
T ss_dssp EEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 23468884446754189999589899999999966996996574225587886069960999799999999999999999
Q ss_pred -------C
Q ss_conf -------8
Q 001738 683 -------V 683 (1019)
Q Consensus 683 -------~ 683 (1019)
.
T Consensus 401 ~~~~~~f~ 408 (408)
T d1t3ia_ 401 QATIRFFS 408 (408)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
T ss_conf 99999759
|
| >d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: 2-oxoisovalerate dehydrogenase (E1B), PP module species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30727.49 Aligned_cols=1 Identities=0% Similarity=0.902 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~p~~~~~p~p~~rp~~~~d~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~vrvld~~g~~~~~~~~~l~~e~l~~~y 80 (407)
T d1qs0a_ 1 NEYAPLRLHVPEPTGRPGCQTDFSYLRLNDAGQARKPPVDVDAADTADLSYSLVRVLDEQGDAQGPWAEDIDPQILRQGM 80 (407)
T ss_dssp CCSCCCCCCCCCCSCCTTSCCCGGGSCCCCTTCSCCCCTTCCGGGGHHHHTSCBCCBCTTSCBCSGGGSSCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99898545799999999988885445568876679995568911244245670899899998998778998999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 r~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~~~aL~~~D~~f~~yR~~g~~larG~~~~~~~~e~~g~~~g~~ 160 (407)
T d1qs0a_ 81 RAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPL 160 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999669730668998849999999986797798982545799999987619999999862457877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Gr~~~~h~~~~~~~~~~~s~~vg~q~p~AvG~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvifv~eN 240 (407)
T d1qs0a_ 161 KGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVN 240 (407)
T ss_dssp TTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 78875443355323200025653346623356677776516760101245655433201888999873057626999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 N~~aist~~~~~~~~~~~~~~ra~~~Gi~~~~VDGnD~~avy~a~~~A~e~aR~g~gP~lIE~~TyR~~gHs~sDD~~~Y 320 (407)
T d1qs0a_ 241 NQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKY 320 (407)
T ss_dssp CSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGT
T ss_pred ECCCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 02301364111200100688888861865278625439999999998889985389746997741018988765554345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 R~~~E~~~w~~~DPI~rl~~~Li~~g~~se~e~~~i~~ei~~eV~~A~~~Ae~~~~~~~~p~P~~~~lf~~VY~e~p~~l 400 (407)
T d1qs0a_ 321 RPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPDHL 400 (407)
T ss_dssp SCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCCHHH
T ss_pred CCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHH
T ss_conf 89999998883897999999999879999999999999999999999999987221036899699999845225999889
Q ss_pred ------C
Q ss_conf ------8
Q 001738 683 ------V 683 (1019)
Q Consensus 683 ------~ 683 (1019)
.
T Consensus 401 ~eQ~~el 407 (407)
T d1qs0a_ 401 RRQRQEL 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHHC
T ss_conf 9999739
|
| >d1eu8a_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=100.00 E-value=0 Score=30721.33 Aligned_cols=1 Identities=0% Similarity=-1.091 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~g~i~~~~~g~p~~~~~~~~~i~~F~~~~p~i~V~~~~~~~~~~~~~~~~~~~~~a~g~~PDi~~~~~~~~~~~~~~g 80 (407)
T d1eu8a_ 1 IEEGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASG 80 (407)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHHHHHHHSTTCEEEEEECCSSHHHHHHHHHHHHTTTCSSEEEEEEETTTHHHHHHHT
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCC
T ss_conf 97426999978976699999999999998886918999973684599999999999828999879998948899999879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~dL~~~~~~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~~~yNkdl~~~~G~~~p~~T~de~~~~~~~l~~~~~ 160 (407)
T d1eu8a_ 81 WLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGER 160 (407)
T ss_dssp CBCCSHHHHHHHTCCGGGBCHHHHHHHTEETTEECCEEEEEEECEEEEEHHHHHHTTCCSCCSBHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHCCHHHHHHCHHHHHHHHCCCCEEECCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 93338576553113255404889987513454230276301234554161255542157988899999999999873045
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (407)
T d1eu8a_ 161 ETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEP 240 (407)
T ss_dssp TTCTTCEEEECCCSSSHHHHHHHHHHHHTTTCCSEEEETTEEEECTTCHHHHHHHHHHHHHHHTSCCSCGGGGTTCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 76775221234555544302446789984488611024677521469999999999999999705657632000001577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~f~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fl~~l~s~e~ 320 (407)
T d1eu8a_ 241 VRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSV 320 (407)
T ss_dssp HHHHHHTTCEEEEEECTHHHHHHTSTTCTTTTCEEEECCCBCTTSCCCCBEEEEEEEEBTTCSCHHHHHHHHHHHTSHHH
T ss_pred HHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 99998568745742572888765320145455534411125678654311304202676787549999999874002789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~eal~~~~~~ 400 (407)
T d1eu8a_ 321 QKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKE 400 (407)
T ss_dssp HHHHHHHTCCCBSBTTGGGSHHHHHHCTHHHHTHHHHHTCBCCCCCTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999851888662777739875611967999999997285278888789999999999999985999999999999999
Q ss_pred ------C
Q ss_conf ------8
Q 001738 683 ------V 683 (1019)
Q Consensus 683 ------~ 683 (1019)
.
T Consensus 401 ~~~~l~~ 407 (407)
T d1eu8a_ 401 AEELVKQ 407 (407)
T ss_dssp HHHHHTC
T ss_pred HHHHHCC
T ss_conf 9999576
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=100.00 E-value=0 Score=30716.75 Aligned_cols=1 Identities=100% Similarity=0.370 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~v~Y~i~~drF~~gd~~~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLdyl~~LGv~~I~L~Pi~~~~~~ 80 (407)
T d1qhoa4 1 SSSASVKGDVIYQIIIDRFYDGDTTNNNPAKSYGLYDPTKSKWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDT 80 (407)
T ss_dssp CTTSCCTTCCEEEECGGGTCCSCGGGSSCGGGTTCBCTTSCSTTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSS
T ss_pred CCCHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 97132057779996355506799877766555455577655667657848999998799999769988996965207765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
T d1qhoa4 81 LAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYF 160 (407)
T ss_dssp CSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSS
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67889988774012224777778998899999999866302113331201455677622222223676556676555555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~f~~~ 240 (407)
T d1qhoa4 161 DDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKS 240 (407)
T ss_dssp SCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 65555422246777786645342234456776655700332025678999876777865315643101101251467899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~i~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (407)
T d1qhoa4 241 LADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNSGVNVLDFDLNTVIRNVFGTFTQTMYDLNNMVNQTGNEYKYKEN 320 (407)
T ss_dssp HHHHHHHHCCCEEEECCCCCCTTSTTHHHHHHHHHHSSCEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999742685345565588735667777631135665412102577888887640220146788999875201345202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~f~~nHD~~R~~~~~~~~~~~~~a~a~ll~~pGiP~iyyGdE~G~~g~~d~~~r~~~~~~~~~~~~~~~~~~L~~lR~ 400 (407)
T d1qhoa4 321 LITFIDNHDMSRFLSVNSNKANLHQALAFILTSRGTPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTLAGLRR 400 (407)
T ss_dssp CEECSCCTTSCCHHHHCCCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTTTCCCCCCCCTTSHHHHHHHHHHHHHH
T ss_pred HCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 12000368854401124899999999999997279868863874397899895410137866688599999999999985
Q ss_pred ------C
Q ss_conf ------8
Q 001738 683 ------V 683 (1019)
Q Consensus 683 ------~ 683 (1019)
-
T Consensus 401 ~~paLr~ 407 (407)
T d1qhoa4 401 NNAAIQY 407 (407)
T ss_dssp HCHHHHH
T ss_pred HCHHHCC
T ss_conf 0984474
|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Burkholderia pseudomallei [TaxId: 28450]
Probab=100.00 E-value=0 Score=30648.17 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~wp~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~lD~~alk~di~~l~~~s~d~wpaD~G~ygp~lVRlAWHsA 80 (406)
T d1mwva1 1 NGTSNRDWWPNQLDLSILHRHSSLSDPMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSA 80 (406)
T ss_dssp CCCCHHHHCTTSCCGGGGSCSCGGGCCSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99886666831138741356876569898887789998750599999999999745321475534662168998888763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gTYR~~D~RGGanGg~iRfaPe~sW~~N~~Ldkar~lLepIK~ky~~~IS~ADLivLAG~vAiE~~Gg~~i~f~~GR~d~ 160 (406)
T d1mwva1 81 GTYRTADGRGGAGEGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRAISWADLLILTGNVALESMGFKTFGFAGGRADT 160 (406)
T ss_dssp TTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred CCCCCCCCCCCCCCCEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCC
T ss_conf 24104579889987615775443578754679999999999997477754233256620788987369813777676664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Plaa~~~gliyvnpeg~~g~pd~~~~a~~lrd~f~rMglnd~E~vAL 240 (406)
T d1mwva1 161 WEPEDVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVAL 240 (406)
T ss_dssp SSCCCCCCCSCSSTTCCTTSTTCSEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 33223556644443454456544566753334764444456666687645688970235899999987606870889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~G~HtlG~~hg~~~~~~~g~~pe~~~~~~~g~gw~~~~~~g~~~~~~~sg~eG~wT~~P~~~dN~yF~~Ll~~~we~~~ 320 (406)
T d1mwva1 241 IAGGHTFGKTHGAGPASNVGAEPEAAGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTK 320 (406)
T ss_dssp HHHHTTSCBCCBSSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEE
T ss_pred HHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEEC
T ss_conf 86432211135788510047754567510025666666554577766778873676799761116888656447645520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 s~~g~~q~~~~~~~~~~pda~~~s~~~~~~ml~tDlal~~Dp~~R~iaE~YA~d~e~F~~dFa~AW~KLm~~Dmgp~~~y 400 (406)
T d1mwva1 321 SPAGAHQWVAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTHRDMGPRARY 400 (406)
T ss_dssp CTTCCEEEEETTCCSCEECSSCTTCEECCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHC
T ss_conf 45655245645755577766588777476402443333029888999999962999999999999999974688980202
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
.
T Consensus 401 ~g~~~p 406 (406)
T d1mwva1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 699999
|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=100.00 E-value=0 Score=30648.16 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~p~~~~~~~l~~~~~~~~p~~~~~~y~~~~~~~d~~~~~~di~~l~~~~~~~wpaD~g~~gP~lVRlAWHs 80 (406)
T d1itka1 1 KRPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHS 80 (406)
T ss_dssp CCCCCHHHHCTTSCCTHHHHTTSCCCSSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99986566586444773245687667989988678999876449999999999974433357544466313676555553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 AgTYR~sD~RGGanGariRfaPe~sW~~N~~LdkAr~lLepIK~kyg~~IS~ADLivLAG~vAiE~~ggp~i~f~~GR~D 160 (406)
T d1itka1 81 AGTYRTADGRGGAAGGRQRFAPINSWPDNANLDKARRLLLPIKQKYGQKISWADLMILAGNVAIESMGFKTFGYAGGRED 160 (406)
T ss_dssp HTTCCTTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCC
T ss_pred HCCEECCCCCCCCCCCEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 10011257888998762575666266777422999999999998627355443042000155564426863224557765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~~~~d~~~g~~~e~~~d~~~~~~~~l~~pl~a~~~~liyv~Peg~~g~~d~~~~a~~lrd~f~rMgl~d~E~VALigG 240 (406)
T d1itka1 161 AFEEDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAG 240 (406)
T ss_dssp CSSCCTTCCCCSCSSTTCCCSCSSTTCCCTTCSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 55655554557655656666677655555430013235555688665677884115899999999824881999998750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~htlG~~hg~~~~~~~~g~~Pe~~~~~~~g~g~~~~~~~g~g~~~~~sG~~G~wT~~p~~~~N~yF~~Ll~~~w~~~~s~ 320 (406)
T d1itka1 241 GHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGP 320 (406)
T ss_dssp HTTSCEECBSSCHHHHBCCCGGGSCGGGTTCCCCBCC-------CBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEECC
T ss_conf 24246335788743357878655544346764457888775765545775544455434345612100135565410036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~g~~~~~~~~~~~~~~~pda~~~~~~~~~~ml~tDlaL~~Dp~~R~iaE~YA~d~e~F~~DFa~Aw~KL~~~D~gp~~ry 400 (406)
T d1itka1 321 GGAWQWAPKSEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHRDMGPPERF 400 (406)
T ss_dssp TSCEEEEESSSTTTTCEECSSCTTCEECCCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 77437526776544577756566775577503667876009878999999960999999999999999972678983345
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
.
T Consensus 401 ~gp~~p 406 (406)
T d1itka1 401 LGPEVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30647.82 Aligned_cols=1 Identities=100% Similarity=0.736 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (406)
T d1u2za_ 1 SSTFVDWNGPCLRLQYPLFDIEYLRSHEIYSGTPIQSISLRTNSPQPTSLTSDNDTSSVTTAKLQSILFSNYMEEYKVDF 80 (406)
T ss_dssp CCBSSCTTSCEEECCSCCBCHHHHHHCCCCCCCCCCGGGCCC------------------EEEEECSSCTTCEEEEECCS
T ss_pred CCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEC
T ss_conf 97532587743465553020665310553379877772000477771443068876898605887324666103788850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~p~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~~~~~~~~~l~~~~ 160 (406)
T d1u2za_ 81 KRSTAIYNPMSEIGKLIEYSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQRIIDHLETID 160 (406)
T ss_dssp SSCCSSSCHHHHHHHHHHHHHHTTCCTTHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 56524569899999999999986488489999999999999998742799999999999999999866615988876267
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~i~~~~y~r~v~p~~~~L~~Y~~fs~~vYGEl~~~~i~~Il~~l~Lkpgd~fLDLGCG~G~~vl~aA~~~g~ 240 (406)
T d1u2za_ 161 KIPRSFIHDFLHIVYTRSIHPQANKLKHYKAFSNYVYGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGC 240 (406)
T ss_dssp EEEHHHHHHHHHHHHHHHTGGGGGGGCSCCSSGGGCCCCBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCC
T ss_conf 88889999998886446036886776266789977403478899999999838999998996789875999999997699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~ 320 (406)
T d1u2za_ 241 ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKIL 320 (406)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 76999848999999999999987555555303566520334404221654224545643999733167367999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 r~LKPGGrIVs~~~~~~~~~~it~r~~~~~~~il~v~~~~~~~~sVSWt~~~v~yyl~tv~~~i~~~~f~~~~~~R~~r~ 400 (406)
T d1u2za_ 321 QTAKVGCKIISLKSLRSLTYQINFYNVENIFNRLKVQRYDLKEDSVSWTHSGGEYYISTVMEDVDESLFSPAARGRRNRG 400 (406)
T ss_dssp TTCCTTCEEEESSCSSCTTCCCCSSSTTCGGGGEEEEEEECCTTCBTTBSSCCEEEEEEECSSCCGGGSCCC------C-
T ss_pred HHCCCCCEEEEECCCCCCCHHHHHHCCCCCHHCCCCHHHCCCCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 72699828999114678740145520353000033132145336633466987653739998888721462113553347
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
.
T Consensus 401 ~P~kyt 406 (406)
T d1u2za_ 401 TPVKYT 406 (406)
T ss_dssp --CCBC
T ss_pred CCCCCC
T ss_conf 888889
|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Catalase-peroxidase KatG domain: Catalase-peroxidase KatG species: Synechococcus sp. pcc 7942 [TaxId: 1140]
Probab=100.00 E-value=0 Score=30647.37 Aligned_cols=1 Identities=100% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~wp~~~~~~~l~q~~~~~~p~~~~~~y~~~~~~ld~a~k~Dl~~l~~~s~~~wpaD~G~ygP~lVRlAWhsAgTYR 80 (406)
T d1ub2a1 1 STAEWWPKALNLDILSQHDRKTNPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYR 80 (406)
T ss_dssp CTTSSCTTSCCGGGGSCSCTTTCCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 97555887768521015887679899997889999999999999999997455234755457621377865554014321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~sD~RGGanGgriRfaP~~sW~~N~~LdkAr~lL~pIK~ky~~~IS~ADLivLAG~vAiE~agg~ti~f~~GR~Da~~~~ 160 (406)
T d1ub2a1 81 IADGRGGAGTGNQRFAPLNSWPDNTNLDKARRLLWPIKQKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPE 160 (406)
T ss_dssp TTTCCCSSTTCGGGSTTGGGCGGGTTHHHHHHHTHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCC
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 67898899877446822304566318899999998887642876531137776129999873498335677766666776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~dv~~g~~~e~l~~~~~~~~~~~~~~~l~~pl~a~~~~liyvnP~g~~g~pd~~~~a~~ir~~f~rM~mnd~E~vAL~aG 240 (406)
T d1ub2a1 161 KDIYWGPEKEWFPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAG 240 (406)
T ss_dssp TTCCCCSCSSSSCCSSSTTCSEETTTEECTTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 55455554455788767544467754322465420157311177534678974555788655677753788998642153
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~ht~Gk~hg~~~~~~~g~~p~g~~~e~~g~~~~n~~~~g~g~~t~tSg~eg~wt~~p~~~dn~yF~~ll~~~~W~~~ks~ 320 (406)
T d1ub2a1 241 GHTVGKCHGNGNAALLGPEPEGADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNP 320 (406)
T ss_dssp HHTSCCBCBCSCSTTBCCCGGGSCGGGTTCCSCBCSSCCSGGGCBSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECT
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCC
T ss_conf 31002136777501237655565410067766777773646666688888777656443467412333205640102453
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~ga~q~~~~~~~~~~~~~~~~d~s~~~~~~mt~tDLal~~Dp~~R~iaE~Ya~d~e~F~~dFa~AW~KL~~~Dmgp~~~~ 400 (406)
T d1ub2a1 321 AGAWQWEPINPREEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDPAYFADVFARAWFKLTHRDMGPKARY 400 (406)
T ss_dssp TSCEEEEESSCCGGGSCBCSSCTTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHC
T ss_conf 30114455675323477755477777577503567763108878999999971999999999999999971677976531
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
.
T Consensus 401 ~g~~~p 406 (406)
T d1ub2a1 401 IGPDVP 406 (406)
T ss_dssp BSTTCC
T ss_pred CCCCCC
T ss_conf 799999
|
| >d1ei6a_ c.76.1.4 (A:) Phosphonoacetate hydrolase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Alkaline phosphatase-like superfamily: Alkaline phosphatase-like family: Phosphonoacetate hydrolase domain: Phosphonoacetate hydrolase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30645.70 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~vi~I~iD~l~~~~l~~~~~~~~TPnid~La~~G~~f~~~~~~~~~c~PsrasllTG~yp~~hG 80 (406)
T d1ei6a_ 1 TNLISVNSRSYRLSSAPTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLTGDCVVPSFTNPNNLSIVTGAPPSVHG 80 (406)
T ss_dssp CCEEEETTEEEECCSSCEEEEECTTCCHHHHHHHHHTTSCHHHHHGGGTSEEEEEECCSSCCHHHHHHHHHHTSCHHHHC
T ss_pred CCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHCC
T ss_conf 96484786104678998899997899978874005557991899999689348322049971589999999678988879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T d1ei6a_ 81 ICGNFFFDQETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLLGHQLKGICFSAEKADQVNLEEHGVENIL 160 (406)
T ss_dssp CCSSEEEETTTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHHTTTCCSEEEESTTCSSCCHHHHSCCCHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 57775446554410100332123456544311123465302114565645555430321456567786523444543221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~i~~l~~~~~~~~~~~d 240 (406)
T d1ei6a_ 161 ARVGMPVPSVYSADLSEFVFAAGLSLLTNERPDFMYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQGAIVAITAD 240 (406)
T ss_dssp HHHTCCCCCSSSTHHHHHHHHHHHHHHHTTCCSEEEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 10233222123332102444432220247884201123433334456899889999999999999999867966999934
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d1ei6a_ 241 HGMNAKTDAIGRPNILFLQDLLDAQYGAQRTRVLLPITDPYVVHHGALGSYATVYLRDAVPQRDAIDFLAGIAGVEAVLT 320 (406)
T ss_dssp CCCEECBCTTSCBCEEEHHHHHHHHHCTTSEEEECTTSCTTCCBGGGCBSEEEEEECTTSCHHHHHHHHHTSTTEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHCC
T ss_conf 54345675223320232144201110110000245422210000122320234313327899999998752365223304
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~~igdii~~sd~g~~lg~~~~~~~~s~~~~~~~~hGg~~e~~VPlIi~~P~~~~~~~~~i~~~Di~d~ 400 (406)
T d1ei6a_ 321 RSQACQRFELPEDRIGDLVVLGERLTVLGSAADKHDLSGLTVPLRSHGGVSEQKVPLIFNRKLVGLDSPGRLRNFDIIDL 400 (406)
T ss_dssp HHHHHHHHTCCGGGSCSEEEEECTTCEEESCTTTCBGGGCCSCCEECCSGGGCEEEEEESSCBCCCC--CCCBGGGHHHH
T ss_pred HHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECHHHH
T ss_conf 98999973999787466999956996877455445433467767565651147308799558656777884325061887
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
.
T Consensus 401 ~~~~~~ 406 (406)
T d1ei6a_ 401 ALNHLA 406 (406)
T ss_dssp HHHCBC
T ss_pred HHHHCC
T ss_conf 763039
|
| >d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Thermophilic metalloprotease-like superfamily: Thermophilic metalloprotease-like family: Thermophilic metalloprotease (M29) domain: Aminopeptidase T species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=30643.26 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v~~~d~~i~r~~~~~a~~e~l~~~p~ 80 (406)
T d2ayia1 1 AFKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVIYGDQELARKRLALAPEEGLDKAPA 80 (406)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEECCHHHHHHHHHHSCTTCTTCCCH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCHHHHHHCCH
T ss_conf 96799999999999971268999989997166569999999999998699738996067699999996399988743624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~a~i~I~~~np~~l~~vdp~ki~~~~ka~~~~~~~~~~~~~~~~~~W~i~~~P~~~~A~~~~~~l~~ 160 (406)
T d2ayia1 81 WLYEGMARAFREGAARLAVSGSDPKALEGLPPEKVGRAQKANARAYKPALEAITEFVTNWTIVPFAHPGWARAVFPGLPE 160 (406)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSSCBCBEECCCTTTHHHHCCCSCH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCH
T ss_conf 46889999997189289961698520126996899999998899879999998536566399975782177661789767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~e~~~~l~d~if~~~~ld~~dp~~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~GTDL~~~i~~~~~w~~~~~~~~~g~~~ 240 (406)
T d2ayia1 161 EEAVRRLWEAIFQATRADQEDPIAAWEAHNRALHEKVAYLNARRFHALHFKGPGTDLVVGLAEGHLWQGGATATKGGRLC 240 (406)
T ss_dssp HHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTEEEEEECCTTBCCEESSCCCSSSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 89999999999976346651079999999999999999985165148996389369999945884015887642278767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~NlP~GEvftaP~e~svnG~i~~d~~~~~~g~l~~~i~l~f~~G~vv~~~~~~~~~~l~~~~~~d~~a~~lgE~~ig~n 320 (406)
T d2ayia1 241 NPNLPTEEVFTAPHRERVEGVVRASRPLALGGTLVEGIFARFERGFAVEVRAEKGEEVLRRLLDTDEGARRLGEVALVPA 320 (406)
T ss_dssp CSBSSCCCEEECCCTTCEEEEEECSSCEEETTEEEBSCEEEEETTEEEEEECSBCHHHHHHHTTSSSGGGSEEEEECCCT
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf 68899832585020484211998045454433303473799948879997557649999987624867636788876047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~n~L~DE~gt~Hia~G~~Y~~~~~g~~~~~~~~~~g~n~s~~H~D~~~~~~~~~~dgv~~dG~~~~i~~ 400 (406)
T d2ayia1 321 DNPIAKTGLVFFDTLFDENAASHIAFGQAYQENLEGRPSGEAFRKRGGNESLVHVDWMIGSEEMDVDGLYEDGTRTPLMR 400 (406)
T ss_dssp TSHHHHHTCCCCCHHHHHTTSCEEEEECCCGGGBCC---CCSHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEE
T ss_conf 88540345111330587478604766876411134788756763079806644786713887178999984891889988
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
-
T Consensus 401 ~G~f~i 406 (406)
T d2ayia1 401 RGRWVV 406 (406)
T ss_dssp TTEECC
T ss_pred CCEEEC
T ss_conf 989969
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=100.00 E-value=0 Score=30638.48 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~viY~i~~drF~~g~~~~d~~~~~~~~~~~~~~~~~gGdl~Gi~~kLd~~YLk~LGv~~I~L~Pi~ 80 (406)
T d3bmva4 1 ASDTAVSNVVNYSTDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKYFGGDWQGIINKINDGYLTGMGVTAIWIPQPV 80 (406)
T ss_dssp CCTTSTTCTTCCTTCCEEECCGGGTCCCCGGGSCCGGGBCTTSCSTTSBCCCCHHHHHHHHHTSTTGGGTCCEEEECCCE
T ss_pred CCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCCC
T ss_conf 98766678888753708996123306899777878876577777657667858999987448888987597789979753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~ 160 (406)
T d3bmva4 81 ENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYD 160 (406)
T ss_dssp EECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEE
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCC
T ss_conf 56544567777789712127665235456844461899999999997436431365201566566522012034675356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~l~~~~~~~~~~giDGfR~D~~~~~~~~~~ 240 (406)
T d3bmva4 161 NGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRLDAVKHMPFGWQ 240 (406)
T ss_dssp TTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEESCGGGSCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 87411466545566434556764445666311245554210226689999999887777530777532245444632568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (406)
T d3bmva4 241 KNFMDSILSYRPVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQKVRQVFRDNTDTMYGLDSMIQSTASDYNFIND 320 (406)
T ss_dssp HHHHHHHHHHSCCEEEECCCCCTTCCCHHHHHHHHHSSSEEBCHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHCTTGGG
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99988888753212334333455100022110247776500122023788876405740267789987620013443344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~fl~nHD~~R~~~~~~~~~~~~a~~~~lt~pG~P~IyyGdE~g~~g~~dp~~r~~~~~~~~~~~~~~~~~~Li~lRk~ 400 (406)
T d3bmva4 321 MVTFIDNHDMDRFYNGGSTRPVEQALAFTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKS 400 (406)
T ss_dssp CEECSCCSSSCCSCCSSCSHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCCTTSHHHHHHHHHTTHHHH
T ss_pred HCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 32566677646660688799999999999971797777657653868998824440489877896999999999999863
Q ss_pred -----C
Q ss_conf -----8
Q 001738 683 -----V 683 (1019)
Q Consensus 683 -----~ 683 (1019)
-
T Consensus 401 ~paLry 406 (406)
T d3bmva4 401 NPAIAY 406 (406)
T ss_dssp CHHHHH
T ss_pred CHHHCC
T ss_conf 944159
|
| >d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Serine hydroxymethyltransferase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=30575.91 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~ 80 (405)
T d1kl1a_ 1 MKYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQ 80 (405)
T ss_dssp CCHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 93155549999999999999997691586067767899999856752475768899964607762299999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 lF~a~~anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~ 160 (405)
T d1kl1a_ 81 LFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKAR 160 (405)
T ss_dssp HHCCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHH
T ss_pred HHCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCHHHHHHHHH
T ss_conf 83999414414676588999999844899878873035566445676223364588877732313025313999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPrgg~I~~~~ 240 (405)
T d1kl1a_ 161 LHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE 240 (405)
T ss_dssp HHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEEECH
T ss_pred HHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCCCCCEEEECC
T ss_conf 62765377523146665586999998764198786035667665443126984652110323355334677773587500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~ 320 (405)
T d1kl1a_ 241 QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQ 320 (405)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGG
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCC
T ss_conf 35777776508653468415678899999998738388999999999888999998648943435887664563243446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~~~~~~~~~~ir~~V 400 (405)
T d1kl1a_ 321 QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEARQRV 400 (405)
T ss_dssp TCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 77499999999980959767869899999998872265688998589988999999999999996589679999999999
Q ss_pred ----C
Q ss_conf ----8
Q 001738 683 ----V 683 (1019)
Q Consensus 683 ----~ 683 (1019)
.
T Consensus 401 ~~L~~ 405 (405)
T d1kl1a_ 401 AALTD 405 (405)
T ss_dssp HHHHC
T ss_pred HHHHC
T ss_conf 99639
|
| >d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Proton glutamate symport protein superfamily: Proton glutamate symport protein family: Proton glutamate symport protein domain: Proton glutamate symport protein species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=30573.44 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 l~~rili~lv~Gi~~G~~~~~~~~~~~~~~~l~~~g~lFi~lL~m~v~PLIf~sii~gi~~L~~~~~gkl~~~ti~~~l~ 80 (405)
T d2nwwa1 1 VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLL 80 (405)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTTTTHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCTTTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHH
T ss_conf 98899999999999999972222127899999989999999999999999999999999745501002089999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 tt~iA~~igl~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~l~~~iP~Ni~~al~~~~~l~vi~fail~Gial~~~~~~ 160 (405)
T d2nwwa1 81 TSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNS 160 (405)
T ss_dssp HHHHHHHHHHHHHHHSCSCCCCCCCCCCCCCCCCCCCCHHHHHGGGSCSCHHHHHHSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999860133322000000014311001899999705587899964678630356788889999985022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~l~~~~~~l~~v~~kii~~im~laPigvf~l~a~~~~~~g~~~l~~l~~~~~~~~~~~~l~~~~~~~i~~ 240 (405)
T d2nwwa1 161 ENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLL 240 (405)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00345667889999999999999999898887778889999998753334555567899999999999999888889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~p~~~~~~~~~~~~~Af~T~SS~atlP~~~~~~~~~gv~~~i~~fvlPlgatin~~G~a~~~~~~~~f~a~~~g~ 320 (405)
T d2nwwa1 241 KIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGS 320 (405)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHCCTGGGHHHHHHHHHTTTCCTTTHHHHTTTTSSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHCCCCHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCHHEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 98289848884322310421200166556617899999975999352010236302100364124899999999987197
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~l~~~~~~~~~~~~~l~s~g~~gvPg~~~v~~~~vl~~~glP~~~~~~~~~i~li~~id~l~D~~rT~~Nv~gd~~~a~i 400 (405)
T d2nwwa1 321 HLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAI 400 (405)
T ss_dssp CCCSSTTHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHE
T ss_conf 99989999999999999986178616799999999998699886410565888887498550550898828776588841
Q ss_pred ----C
Q ss_conf ----8
Q 001738 683 ----V 683 (1019)
Q Consensus 683 ----~ 683 (1019)
.
T Consensus 401 v~k~e 405 (405)
T d2nwwa1 401 VAKTE 405 (405)
T ss_dssp HHHHC
T ss_pred EECCC
T ss_conf 33579
|
| >d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=30571.67 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~~ 80 (405)
T d1h6za3 1 VAKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKEM 80 (405)
T ss_dssp CCCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99747997399865578455750568899899999786999998886299999999738976889999999997664776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 160 (405)
T d1h6za3 81 GAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEA 160 (405)
T ss_dssp CCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTSTT
T ss_pred HHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 66523543115553023210122100455666665456689998742550566899999999763011246305678898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~~ 240 (405)
T d1h6za3 161 LSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGTA 240 (405)
T ss_dssp THHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCCC
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
T ss_conf 88888751651124572888887888999866541387541054677678888987620572377778761754113331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (405)
T d1h6za3 241 VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPS 320 (405)
T ss_dssp EEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCSCCEESSHHHHHHHHTTSSCCHHHHHHHSCC
T ss_pred HEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEECCCCHHHCCCCCEECCCCCCCC
T ss_conf 11234542135665443334556777898753368646676233213765770466403310100145321104665545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~l~~e~~~~La~l~~~iE~~fg~PqDIEWAi~dg~L~ILQaRPv~~t~~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 400 (405)
T d1h6za3 321 MEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQV 400 (405)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHHTSSCHHHHHHTSCGGGG
T ss_pred HHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
T ss_conf 55528799999999999999982998204999989989999766788668889999999997699798999872798278
Q ss_pred ----C
Q ss_conf ----8
Q 001738 683 ----V 683 (1019)
Q Consensus 683 ----~ 683 (1019)
.
T Consensus 401 ~~~~~ 405 (405)
T d1h6za3 401 DHLMH 405 (405)
T ss_dssp GGGGC
T ss_pred HHHCC
T ss_conf 67448
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=0 Score=30565.16 Aligned_cols=1 Identities=0% Similarity=-0.660 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~g~~~~~~~~~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~~~k~Pvil~~sPY~~~~~~~~~~~~~~~ 80 (405)
T d1lnsa3 1 LDNHYHFFNDKSLATFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHD 80 (405)
T ss_dssp CCSSCCEETTEECSCSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCC
T ss_pred CCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98855433783413205887568688982888878899874799999742889974599996786787766544322345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~ 160 (405)
T d1lnsa3 81 MNVELEEKTSHEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQ 160 (405)
T ss_dssp CCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTSHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 65433445543333233454222234555665555654455664445568898679879997888788999755468866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G 240 (405)
T d1lnsa3 161 QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENG 240 (405)
T ss_dssp HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCC
T ss_conf 63009999999871563333433443211454387458995289999999998608865419994476655888754178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~G 320 (405)
T d1lnsa3 241 LVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHG 320 (405)
T ss_dssp SBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCEEEEEE
T ss_conf 40035421255666653146655555400221115565154203455541233233555536853565137988899975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 w~D~~v~~~~~~~~y~al~~~~~~~Lilgpw~H~~~~~~~~~d~~~~~~~wFD~~LkG~~ng~~~~~~~~~~~~g~~~W~ 400 (405)
T d1lnsa3 321 LQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVAKLLDRDLNLNLPPVILQENSKDQVWT 400 (405)
T ss_dssp TTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHHHHTTCCCCCCCCSEEEECTTSSSCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC
T ss_conf 06889897899999999873799379995887899765555369999999999986889889898987999737999741
Q ss_pred ----C
Q ss_conf ----8
Q 001738 683 ----V 683 (1019)
Q Consensus 683 ----~ 683 (1019)
.
T Consensus 401 ~~~~W 405 (405)
T d1lnsa3 401 MMNDF 405 (405)
T ss_dssp EESCS
T ss_pred CCCCC
T ss_conf 08989
|
| >d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30564.94 Aligned_cols=1 Identities=0% Similarity=-1.688 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~d~~~vR~~FP~l~~~~~~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~ 80 (405)
T d1jf9a_ 1 IFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN 80 (405)
T ss_dssp CCCHHHHHHTCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHCHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98979998758211467189982997382006899999999999998666987630409999999999999999999839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i 160 (405)
T d1jf9a_ 81 ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF 160 (405)
T ss_dssp CSCGGGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHC
T ss_conf 98755430237688897788842331026789989998375331699999999973968999877998838799999753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~t~lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~ 240 (405)
T d1jf9a_ 161 DEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEA 240 (405)
T ss_dssp CTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCSSCEEEEECHH
T ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEECCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEECHH
T ss_conf 69957999966777655438467766678873975641554000015653333078646613230156887510242265
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~ 320 (405)
T d1jf9a_ 241 LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVP 320 (405)
T ss_dssp HHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 54036863223565675344555655553224307787677899999999999981849999999999988776651388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~r~~ivsf~~~~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i 400 (405)
T d1jf9a_ 321 DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI 400 (405)
T ss_dssp TEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 65556876767479997389899999999987892997660321567886099988999788999999999999999999
Q ss_pred ----C
Q ss_conf ----8
Q 001738 683 ----V 683 (1019)
Q Consensus 683 ----~ 683 (1019)
.
T Consensus 401 ~r~~~ 405 (405)
T d1jf9a_ 401 HRLLG 405 (405)
T ss_dssp HHHHC
T ss_pred HHHCC
T ss_conf 99609
|
| >d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=30492.06 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~P~Pi~~~~Dp~dR~v~~~P~~~~pyD~R~~i~g~~~~~~~~~~i~D~~sF~E~~~~~a~svVtG~ARL~G~PVGVIAn 80 (404)
T d1uyra2 1 NMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGV 80 (404)
T ss_dssp TSCCCCCCCSSCSSSCCCCCCCSSSCCCHHHHHHCEEETTEEECCSSCTTCCEEESTTSCTTEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCEEEEEEEECCEEEEEEEE
T ss_conf 98989789999800135657899999777999846755555445010287025520046786699999999999999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 e~~~~~g~i~aDpa~~~s~~~~~~~~Ggv~~p~sA~K~A~~i~d~cd~~~lPLi~l~D~pGF~~G~~~E~~gilr~GA~i 160 (404)
T d1uyra2 81 ETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFI 160 (404)
T ss_dssp CCSCEEEEECCCTTCSSCCCEEEEECTTCBCHHHHHHHHHHHHHHHTTSCCCEEECCCCCCBCC------CTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 76102687568755653055565404786685579999999998652346645886137766676899987899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 v~A~~~~~vP~i~vI~~~g~~~GGa~vv~~~~~~~~~~~~yAwP~a~~gVm~pEGav~I~fr~e~~~~~~~r~d~~~~el 240 (404)
T d1uyra2 161 VDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYREL 240 (404)
T ss_dssp HHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGGTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHC-------
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHEECCHHHHCCHHHHHHHHHHH
T ss_conf 99998548997999957864130234103676677655488878654106786654321033021113265568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~l~~~~~a~e~~~~l~~~i~~re~~l~p~y~qvA~~Fadlhdt~~Rm~~kG~I~~iv~w~~tR~~~~~~lrr~l~e~~ 320 (404)
T d1uyra2 241 RSQLSNKSLAPEVHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNEEY 320 (404)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTTSSHHHHHHHTCSSEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98725755587789999999999999862789999999998508687898568466122878859999999999874999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (404)
T d1uyra2 321 LIKRLSHQVGEASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLESFAQDLAKKIRSDHDNAIDGLS 400 (404)
T ss_dssp HHHTTTTCCSSCCHHHHHHHHHTTSCTTSCTTCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999985777787999999999987346865639999999847799999999998999999999997539088999999
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
.
T Consensus 401 ~~~~ 404 (404)
T d1uyra2 401 EVIK 404 (404)
T ss_dssp TCCC
T ss_pred HHHC
T ss_conf 9849
|
| >d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Plasmodium yoelii yoelii [TaxId: 73239]
Probab=100.00 E-value=0 Score=30491.35 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~y~p~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~ 80 (404)
T d1z7da1 1 KTPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFS 80 (404)
T ss_dssp CCHHHHHHHHHHHBCCCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 98799997787617888999885699946388997998999983306887846259699999999999857886665102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~ 160 (404)
T d1z7da1 81 VPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF 160 (404)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999997444314433024410243037789999998875213443222442222245788744333456554455677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~ 240 (404)
T d1z7da1 161 GPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLC 240 (404)
T ss_dssp -----CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
T ss_conf 88876300236656899999706997799999778388897409999999999999881978999767547774434345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~ 320 (404)
T d1z7da1 241 VHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFL 320 (404)
T ss_dssp GGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
T ss_conf 00059887778872311289887554456399871478998576889895013555544344300003443001015789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~~al 400 (404)
T d1z7da1 321 ENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTV 400 (404)
T ss_dssp HHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999975699727887527199999748865599999999969938943899989997986789999999999999999
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
.
T Consensus 401 k~~~ 404 (404)
T d1z7da1 401 KFFD 404 (404)
T ss_dssp HHHC
T ss_pred HHHC
T ss_conf 9629
|
| >d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-CAM species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=30491.32 Aligned_cols=1 Identities=100% Similarity=0.437 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 l~p~p~~~p~~~~~d~d~~~p~~~~~dp~~~~~~lr~~~~~~~~~~~~~~g~w~vtr~~dv~~vl~d~~~Fss~~~~~~~ 80 (404)
T d1re9a_ 1 LAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPR 80 (404)
T ss_dssp CCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHGGGGSTTSCSEEEECGGGCEEEECSHHHHHHHHHCTTTEETTSCSSSH
T ss_pred CCCCCCCCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98877999832266789898577632818999999960899779856999989976999999997699757689987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~D~p~H~~~R~~l~~~Fs~~~l~~~~~~i~~~~~~ll~~~~~~g~~D~v~~~a~~l~~~vi~~llG~p 160 (404)
T d1re9a_ 81 EAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLP 160 (404)
T ss_dssp HHHHHCCCTTTTCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTHHHHHHHHHHTTCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 44333456654578889999997526757843189998999999999974421467346420344577888799987420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~li~~~r~~~~~d~~~~~~~~~~~~~~~~~~e~~~~~~~l~~ag~ 240 (404)
T d1re9a_ 161 EEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGL 240 (404)
T ss_dssp GGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECCHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 02102321335655431226899999999999999998887506654402333100233345758899999999998763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 eTt~~~l~~~~~~L~~~p~~~~~l~~~~~~~~~~v~E~lR~~~p~~~~r~~~~~~~~~G~~ip~G~~V~~~~~aanrDp~ 320 (404)
T d1re9a_ 241 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDER 320 (404)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCCBCCEEEESSCEEETTEEECTTCEEECCHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 34678899999997550588999876410111123342234553333433223200388667640233243675367854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~f~dPd~F~p~R~~~~hl~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~g~~~lpv~~~P~~ 400 (404)
T d1re9a_ 321 ENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPAT 400 (404)
T ss_dssp TSSSTTSCCTTCSSCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCCCCEECSSBCEESCCEEECCGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEECCCCCCCCCEEEEEEEEECC
T ss_conf 47993331889999998877998616801999999999999999997898589999964315887258543468992068
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
.
T Consensus 401 ~~~~ 404 (404)
T d1re9a_ 401 TKAV 404 (404)
T ss_dssp CCCC
T ss_pred CCCC
T ss_conf 6869
|
| >d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Kynureninase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=0 Score=30490.59 Aligned_cols=1 Identities=0% Similarity=0.537 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~d~~d~l~~~R~~F~~~~~~iYLd~as~g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA 80 (404)
T d1qz9a_ 1 TTRNDCLALDAQDSLAPLRQQFALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLA 80 (404)
T ss_dssp CCHHHHHHHHHTCTTGGGGGGBCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 96699997567781899985189999989867851033789999999999998750467565552328999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~llga~~~ei~~~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (404)
T d1qz9a_ 81 TLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQA 160 (404)
T ss_dssp TTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHH
T ss_pred HHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECEECCCCCCCHHHHHH
T ss_conf 99689987579956706777777655555420357885799962543347788775422132100010354542668986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~~~T~lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~ 240 (404)
T d1qz9a_ 161 IDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWV 240 (404)
T ss_dssp CSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEE
T ss_pred CCCCCEEEEEECCCCCCCCEECHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECHHHCCCCCCEEEEEEE
T ss_conf 69884599984245555616238997310324443326885123321233444454509998050214668856999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 320 (404)
T d1qz9a_ 241 SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELV 320 (404)
T ss_dssp CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 36556307863223577555522234544335604554320010467888777888877668999999987678999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~~~~v~~~L~~~gi~~~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~ 400 (404)
T d1qz9a_ 321 EQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 400 (404)
T ss_dssp HHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 75435898799788883120139999169999999999888989862599869997997789999999999999999971
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
.
T Consensus 401 ~~~~ 404 (404)
T d1qz9a_ 401 KTWA 404 (404)
T ss_dssp TTTC
T ss_pred CCCC
T ss_conf 7889
|
| >d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: AmyC N-terminal domain-like domain: Alpha-amylase AmyC species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30489.66 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~k~~l~lvlH~HqP~~~~~~~~~~~ee~W~~~~~~~~Y~pll~~l~~~~~~r~t~n~sP~LleQL~D~~~~~~f~~~~~~ 80 (404)
T d2b5dx2 1 MRGKILIFLHAHLPYVHHPEYDHFLEERWLFEAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHMEK 80 (404)
T ss_dssp CCEEEEEEEEECCCCCCCTTCSSCTTHHHHHHHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 93489999945888644899886443669999999988999999985868619998779999987586756446999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~r~L~~~G~vEll~~~y~Hpilpll~~~~e~~~ 160 (404)
T d2b5dx2 81 LIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVVN 160 (404)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCHHHHH
T ss_conf 99986666552234204788999999999999999999966478999999997698048723520123455049869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Qi~~g~~~~~~~fG~~P~G~W~pE~a~~~~l~~~l~~~Gi~~~~~d~~~l~~~~~~~~~~~~~p~~~~~~~~~~~rd~~ 240 (404)
T d2b5dx2 161 AQITVGVKNYEKHMKKHPRGIWLAECGYYQGLDLYLAQNNVEYFFVDSHAFWFADEQPRYGVYRPIMTPSGVFAFARDPE 240 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEECGGGCBCTTHHHHHHHTTCCEEEECTHHHHTSSSCCTTGGGSCEECTTSCEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 99999999999986999988978753558769999997798699968335523577887666576215886157742510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~vws~~~G~pg~~~~~~~~~~~~~~~~~~~i~~~frd~~ls~~igf~y~~~~~~~~~~~~k~~Yd~~~A~~~a~~~a 320 (404)
T d2b5dx2 241 SSEQVWSAAVGYPGDPRYREFYRDIGFDREMEYIKDYIDPSGVRINTGIKYHRITSKSLDASQKEYYDIDLAMEAVEEHA 320 (404)
T ss_dssp GCGGGGCTTTSGGGCTTSBCTTCCHHHHSCHHHHGGGSCTTSCCCCCSCCCBBCCSSCSCGGGCCBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 01235414568878842121024533467776135764477632011402303566446643234479899999999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~f~~~~~~~~~~~~~~~~~~~vv~i~~DgE~fGh~w~eG~~fL~~l~~~l~~~~~i~~~T~se~l~~~~~~~~~~l~~g 400 (404)
T d2b5dx2 321 RDFLHKKESQARRLMDIMGVEPVIVAPFDAELFGHWWFEGVFFLKRFFELVNESKDLKLVTASEVIDTLEEVQIATPADS 400 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHHHCSSEEECCHHHHHHHCCCCCBCCCCSB
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCCCC
T ss_conf 99999999999876523689987999755132066713379999999999863898389769999986899772230799
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
+
T Consensus 401 SWg~ 404 (404)
T d2b5dx2 401 SWGA 404 (404)
T ss_dssp CSCC
T ss_pred CCCC
T ss_conf 9998
|
| >d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Ornithine aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30489.00 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~ 80 (404)
T d2byla1 1 GPPTSDDIFEREYKYGAHNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAF 80 (404)
T ss_dssp CCCCHHHHHHHHHHHBCSCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 98967999999877546788987844898454999979879999926889988553798999999999996478755643
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~ 160 (404)
T d2byla1 81 YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYD 160 (404)
T ss_dssp EESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHT
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 31049999876543011332220147666403589999987640366312311223357884556510340577865455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~p~~~~~~~~p~~d~~~l~~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~ 240 (404)
T d2byla1 161 GFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRW 240 (404)
T ss_dssp TSCSCCTTEEEECTTCHHHHHHHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred CCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
T ss_conf 77888887157346679999985579986999978843888971499999999999998628079960465364635533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~ 320 (404)
T d2byla1 241 LAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGII 320 (404)
T ss_dssp SGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred CHHHHCCCCCCEEEECCHHHCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 33654699988999774646898662104521023312578887859886999999999999999854703566676688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 l~~~l~~l~~~~i~~vRg~Gl~~~i~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~l~~a 400 (404)
T d2byla1 321 LRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKT 400 (404)
T ss_dssp HHHHHHTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECEEEETTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 99999960136631356246289999826886129999999996991992489998999799678999999999999999
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
-
T Consensus 401 l~~f 404 (404)
T d2byla1 401 ILSF 404 (404)
T ss_dssp HHTC
T ss_pred HHCC
T ss_conf 9729
|
| >d1h12a_ a.102.1.2 (A:) Endo-1,4-beta-xylanase {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Endo-1,4-beta-xylanase species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=0 Score=30485.66 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~a~~~~~y~n~~~~~~~~~i~~k~~~~~~~~f~~~~~~~~y~~~~~~~~~~~~~~~~i~d~~~~dv~SEGq 80 (404)
T d1h12a_ 1 AFNNNPSSVGAYSSGTYRNLAQEMGKTNIQQKVNSTFDNMFGYNNTQQLYYPYTENGVYKAHYIKAINPDEGDDIRTEGQ 80 (404)
T ss_dssp CCCSSCCSSCHHHHCCCCCHHHHTTCCSHHHHHHHHHHHHSSSCSSSCCEEEEEETTEEEEEEEEECCTTTCCEEEHHHH
T ss_pred CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98888787761333755478898619999999999999971789884489971687665200012255479986654378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gYGMl~Av~~ndr~~FD~Lw~Wt~~~l~~~d~~~~~~~~gL~aW~~~~~~~~~~~v~d~nsAtDGDl~iA~ALl~A~~~W 160 (404)
T d1h12a_ 81 SWGMTAAVMLNKQEEFDNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARW 160 (404)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89999999809999999999999998604555444455677613345888987556889999768999999999999861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~~~~Y~~eA~~il~~i~~~~~~~~~~~l~P~~~~f~nPSY~~P~~~~~fa~~~~~~~~~~~W~~v~~~s~~ll~~~~ 240 (404)
T d1h12a_ 161 GNSGEFNYYNDAITMLNTIKNKLMENQIIRFSPYIDNLTDPSYHIPAFYDYFANNVTNQADKNYWRQVATKSRTLLKNHF 240 (404)
T ss_dssp CSSSSCCHHHHHHHHHHHHHHHSEETTEECSCTTCSSCBCGGGCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89407799999999999888740578852556875578686325489999999860577540889999999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~s~~p~~gL~~d~~~~dg~~~~~~~~~~~~~~~~~~~yDA~Rvpl~~a~dy~w~~~d~~~~~~~~~~~~f~~~~~~~~ 320 (404)
T d1h12a_ 241 TKVSGSPHWNLPTFLSRLDGSPVIGYIFNGQANPGQWYEFDAWRVIMNVGLDAHLMGAQAWHKSAVNKALGFLSYAKTNN 320 (404)
T ss_dssp HHHSSTTTTTCCCSCBCTTSCBCCSCCSTTCCSCTTEECTTTHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 13467887789957872489736676667676778865502888778998887505888455799999999999875026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~~G~~~~~~~~~g~~a~~a~a~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~L~~ll~lsG~~r~~ 400 (404)
T d1h12a_ 321 SKNCYEQVYSYGGAQNRGCAGEGQKAANAVALLASTNAGQANEFFNEFWSLSQPTGDYRYYNGSLYMLAMLHVSGNFKFY 400 (404)
T ss_dssp TTSSCBSCEETTEECSSCBCCHHHHHHHHHHGGGCCCHHHHHHHHHHHHTCCCCCSTTHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 88877631316896478888889999999999864793789999999970357888888789999999999963984772
Q ss_pred ---C
Q ss_conf ---8
Q 001738 683 ---V 683 (1019)
Q Consensus 683 ---~ 683 (1019)
-
T Consensus 401 ~~~~ 404 (404)
T d1h12a_ 401 NNTF 404 (404)
T ss_dssp CCC-
T ss_pred CCCC
T ss_conf 4579
|
| >d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Multiple substrate aminotransferase, MSAT species: Thermococcus profundus [TaxId: 49899]
Probab=100.00 E-value=0 Score=30413.42 Aligned_cols=1 Identities=100% Similarity=0.537 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~s~ire~~~~~~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~ai 80 (403)
T d1wsta1 1 INFDSFFSEKAMLMKASEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLAL 80 (403)
T ss_dssp CCGGGGCCHHHHHCCCHHHHHHHHHHTSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98789999998508981899999972899958899978895206989999999999974760014889986779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 160 (403)
T d1wsta1 81 ARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEK 160 (403)
T ss_dssp HHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 99999984899876773642221178899999986268755567886303567776404540267523667743112122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S 240 (403)
T d1wsta1 161 LEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGT 240 (403)
T ss_dssp HHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHEECCCCCCCCCCCCCCCCCEEEECC
T ss_conf 00011101343212322466898786399999999998887449265345021212347887874345677770799845
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~SK~~~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 320 (403)
T d1wsta1 241 FSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPE 320 (403)
T ss_dssp STTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 55133685663444456578899999876402345530145677654114430467889999888999999999864668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~~~l~~al~rl~~~l~~~~ 400 (403)
T d1wsta1 321 GVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEM 400 (403)
T ss_dssp TCEECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 73780788146999989999999999999997897999336636899989979999567999999999999999999998
Q ss_pred --C
Q ss_conf --8
Q 001738 683 --V 683 (1019)
Q Consensus 683 --~ 683 (1019)
.
T Consensus 401 k~~ 403 (403)
T d1wsta1 401 KRV 403 (403)
T ss_dssp HHC
T ss_pred HCC
T ss_conf 449
|
| >d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyC species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30412.28 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~p~~~~~~~~~dP~~~~~~lR~~gPv~ri~~~~~~~~g~~~~w~vt~~~~vr~vl~d~~~fss~~~~~~~ 80 (403)
T d1ueda_ 1 DIDQVAPLLREPANFQLRTNCDPHEDNFGLRAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFTQS 80 (403)
T ss_dssp CCCSCCCEEECCTTTTCEETTEECHHHHHHHTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC---
T ss_pred CHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 93234767688344023117997699999995399798516776435888489979999999997598646488665644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~l~~~Dg~~h~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~ 160 (403)
T d1ueda_ 81 KSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPVGAHALCE 160 (403)
T ss_dssp ------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55442202216764157815799999998686597999876179999999999874124875203566654456666677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rr~~~~~~~~~~~~~~~~~~ls~~~l~~~~~~~l 240 (403)
T d1ueda_ 161 LLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALI 240 (403)
T ss_dssp HHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 73260333456655554302301567888877777899999999999862133115555422366466888877788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~R~~~~d~~~~G~~ip~G~~V~~~~~~ 320 (403)
T d1ueda_ 241 LGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILM 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHHHHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCHHC
T ss_conf 40104678999999999862320101122202442212333202223344322010134645589743333210001000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~rdp~~f~dP~~F~PeR~~~~~lpFG~G~r~CiG~~lA~~el~~~l~~Ll~~f~~~~l~~~~~~~~~~~~~~~~~~~lp 400 (403)
T d1ueda_ 321 ANRDEALTPDPDVLDANRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCPDQVP 400 (403)
T ss_dssp HTTCTTTSSSTTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCBSCCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCEECCEEEE
T ss_conf 25783227994243889999999979998846918999999999999999996797788988776544477510764656
Q ss_pred --C
Q ss_conf --8
Q 001738 683 --V 683 (1019)
Q Consensus 683 --~ 683 (1019)
.
T Consensus 401 v~f 403 (403)
T d1ueda_ 401 VTW 403 (403)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 569
|
| >d1xksa_ b.69.14.1 (A:) Nuclear pore complex protein Nup133 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nuclear pore complex protein Nup133 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30411.62 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~ve~~g~~LPv~V~EaLt~a~~~~~~s~~~s~~G~awvv~g~~l~VW~y~~s~~~~~~~C~~L~LP~sdl~~~a~ 80 (403)
T d1xksa_ 1 ESVNYDVKTFGSSLPVKVMEALTLAEVDDQLTINIDEGGWACLVCKEKLIIWKIALSPITKLSVCKELQLPPSDFHWSAD 80 (403)
T ss_dssp CCSSEEEEECSSCCCHHHHHHHHHCCTTSCEEEEECTTSEEEEEETTEEEEEECCSSCCGGGCCEEEEECCCCSSCCCGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 97542676778987688998862057887447999899679999799999971578887787521797189645455676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Lv~v~~~~~~~~~~~~~~~gvi~vs~tG~VryW~sI~~~~s~~e~~i~l~~~E~~~~l~~~e~~g~ilatstg~l~l~~~ 160 (403)
T d1xksa_ 81 LVALSYSSPSGEAHSTQAVAVMVATREGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIP 160 (403)
T ss_dssp GEEEEECC-------CTTEEEEEECTTCEEEEESCTTCTTCCEEEECC----CCEEEEEEETTTEEEEEETTCCEEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCEEEECHHCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEECCEEEEEEEC
T ss_conf 56761367767667887657999979921898710255766423431368966899888507842999947514999923
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~l~~~~L~~~~g~l~Gi~~~~sSl~~~~~~~~~~~~~s~~~~~~~~~v~~ls~~~lq~W~l~~~~e~~~~~~di~~ 240 (403)
T d1xksa_ 161 ESSGKIHQHILPQGQGMLSGIGRKVSSLFGILSPSSDLTLSSVLWDRERSSFYSLTSSNISKWELDDSSEKHAYSWDINR 240 (403)
T ss_dssp CTTSCEEEEECTTCCCC------------------CCCCEEEEEEETTTTEEEEEESSEEEEEEECSSCEEEEEEEEHHH
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEHHHHH
T ss_conf 78982899993588754555334542002124775434211133455314999977995478980389861567513789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~i~e~~~~~i~~~~~~~~~~~~~i~~~~LD~~~~~~g~~iL~~~~~~~~~~~~~yy~L~ti~~~~~~~~~~~~~~l~~~~ 320 (403)
T d1xksa_ 241 ALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYYSLITIEDNGCQMSDAVTVEVTQYN 320 (403)
T ss_dssp HHHHHHHHHHHTTSTTHHHHHTTCEEEEEEEEEETTEEEEEEEEECTTSSSCBEEEEEEEECCBTTBCCSCEEEEECSCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEC
T ss_conf 99999998752023556565444305998875848976999999732668870799999998278713788999867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~~~rl~vp~p~~~~ayv~~~~~V~~~~~~~~~~~~~~d~I~F~~~~d~il~~~~~~~~pl~fs~~~Glv~it 400 (403)
T d1xksa_ 321 PPFQSEDLILCQLTVPNFSNQTAYLYNESAVYVCSTGTGKFSLPQEKIVFNAQGDSVLGAGACGGVPIIFSRNSGLVSIT 400 (403)
T ss_dssp CBCCCGGGCCCEEECCCSSSSEEEEECSSEEEEEECTTCTTCCCCEEEECCGGGCCEEEEEEETTEEEEEETTTEEEEEE
T ss_pred CCCCCCCCCCCEEEECCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEECCEEEEEE
T ss_conf 85674434760599658998389999099899995789989984417888454677885121578769999234189995
Q ss_pred --C
Q ss_conf --8
Q 001738 683 --V 683 (1019)
Q Consensus 683 --~ 683 (1019)
.
T Consensus 401 ~~~ 403 (403)
T d1xksa_ 401 SRE 403 (403)
T ss_dssp ECC
T ss_pred CCC
T ss_conf 799
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30409.78 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~p~~~~g~~~i~~~f~w~~~~i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk 80 (403)
T d1hx0a2 1 EYAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFR 80 (403)
T ss_dssp CCSCCCCTTCCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHH
T ss_pred CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHH
T ss_conf 98998889972589700076899999999999981998799496815766788999876003687771489999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Lv~~aH~~GI~VIlDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (403)
T d1hx0a2 81 DMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDC 160 (403)
T ss_dssp HHHHHHHHTTCEEEEEECCSEEEETTCCCBSCBSSCCCBBGGGTBBTTTTBCGGGBCTTTCCSTTSBCCCTTCHHHHHHS
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 99999986699799997124466655321345666764543334577788887667887656788874655771002331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~~~pDLn~~np~Vr~~~~~~l~~~~~~GvdGfR~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~ 240 (403)
T d1hx0a2 161 QLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGE 240 (403)
T ss_dssp BGGGEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHHHHHHHTTCCCCCTTTSCTTCCCEEEECCCCCSSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 23445864679999999999999999873977653232321678899999999875073200156775278877516830
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~~ 320 (403)
T d1hx0a2 241 AIKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARL 320 (403)
T ss_dssp SSCGGGGTTTSEEECHHHHHHHHHHHTTCTTCCGGGGGGTTGGGTCCCGGGEEECSCCTTGGGTCSSCGGGCCCGGGHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 21022025887102243223245787641620478998750111368845057863467775556678864144456789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~a~af~lt~p~G~P~iy~gy~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~ 400 (403)
T d1hx0a2 321 YKIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNV 400 (403)
T ss_dssp HHHHHHHHHHSCSSEEEEEECBCCCCCEETTEETTTTCCSSEETTEECCCCBCTTSCBCTTBCCGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999987898164676306644544577667778999888874688747767778518777668999999998663
Q ss_pred --C
Q ss_conf --8
Q 001738 683 --V 683 (1019)
Q Consensus 683 --~ 683 (1019)
.
T Consensus 401 ~~g 403 (403)
T d1hx0a2 401 VDG 403 (403)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 679
|
| >d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154c1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30410.39 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~lR~~GPv~~~~~~g~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (403)
T d1gwia_ 1 ARIPLDPFVTDLDGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRRGEIPADWPLIGLAN 80 (403)
T ss_dssp CCEECCTTCSCHHHHHHHHHHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTTEECCGGGCHHHHTTCSCTTCTTHHHHS
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888987669559999998149978988479960999679999999966976133765333222466765443200003
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~g~~ll~~dG~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~a~~~~~~~~~~~~g~~~~~~ 160 (403)
T d1gwia_ 81 PGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARL 160 (403)
T ss_dssp CCSSGGGCCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 68862158857899999997640443313222447989899875321035844431034433333233221047641000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ag~~tt 240 (403)
T d1gwia_ 161 PRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETT 240 (403)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 00022233222222048999999999987689999987427642222111112123320123358999999987064210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~l~~~~~~l~~~p~~~~~l~~~~~~l~~~i~E~lRl~pp~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rd~~~ 320 (403)
T d1gwia_ 241 ISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERA 320 (403)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTTSSCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCCCCEEECCEEECCCCEEEEECCCCCCCHHH
T ss_conf 11445555433421589999997620100001220221275200024344687670435654632353100245677654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~pdP~~F~PeR~~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~p~~~~~~~~~~~~~~~~~lpv~~~ 400 (403)
T d1gwia_ 321 HGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLA 400 (403)
T ss_dssp HCGGGGSCCTTCCCSSCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESS
T ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEEE
T ss_conf 09955434878899998376688872680199999999999999999679788888834464688655579876479995
Q ss_pred --C
Q ss_conf --8
Q 001738 683 --V 683 (1019)
Q Consensus 683 --~ 683 (1019)
.
T Consensus 401 ~~~ 403 (403)
T d1gwia_ 401 HHH 403 (403)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 079
|
| >d3b55a1 c.150.1.3 (A:40-442) Succinoglycan biosynthesis protein BC3120 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: EreA/ChaN-like superfamily: EreA/ChaN-like family: EreA-like domain: Succinoglycan biosynthesis protein BC3120 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=30413.79 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~wi~~~a~pL~~~~p~~~~~Dl~~L~~~v~dariV~LGEatHGt~Ef~~~r~~l~r~Lvee~Gf~~va~E~d~~~~ 80 (403)
T d3b55a1 1 NQIAKWLEAHAKPLKTTNPTASLNDLKPLKNMVGSASIVGLGEATHGAHEVFTMKHRIVKYLVSEKGFTNLVLEEGWDRA 80 (403)
T ss_dssp HHHHHHHHHHCEEECCCCTTSCSGGGTTHHHHHTTCSEEEEEESCTTBHHHHHHHHHHHHHHHHHSCCCEEEEEEEHHHH
T ss_pred CHHHHHHHHHCEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
T ss_conf 95899999846718888999984779999987479739997267656079999999999999997699889994795889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~vn~yV~~g~g~~~~~~~~~w~~~e~~~li~WmR~yN~~~~~~~~v~f~G~D~~~~~~s~~~~v~~yl~~~~p~~~~~~ 160 (403)
T d3b55a1 81 LELDRYVLTGKGNPSQHLTPVFKTKEMLDLLDWIRQYNANPKHKSKVRVIGMDIQSVNENVYNNIIEYIKANNSKLLPRV 160 (403)
T ss_dssp HHHHHHHHHSCSCGGGTSCGGGCBHHHHHHHHHHHHHHHCTTCSCCCEEEEEECSCCCHHHHHHHHHHHHHHHGGGTHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 99988875488887787676435288999999999984458877842799854565205578999999986198889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~ 240 (403)
T d3b55a1 161 EEKIKGLIPVTKDMNTFESLTKEEKEKYVLDAKTISALLEENKSYLNGKSKEFAWIKQNARIIEQFTTMLATPPDKPADF 240 (403)
T ss_dssp HHHHHHHGGGSSSHHHHHTSCHHHHHHHHHHHHHHHHHHHHTGGGGTTTSHHHHHHHHHHHHHHHHHHHTTCCTTCTTHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99874123333465667764155578899999999999998476541274679999999999999999998456774667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~RD~~Maenl~wl~~~~~kiivwaHN~Hi~~~~~~~~~~~~~~G~~L~e~~G~~y~~IG~~~~~G~v~a~~~~~~~~~ 320 (403)
T d3b55a1 241 YLKHDIAMYENAKWTEEHLGKTIVWGHNGHVSKTNMLSFIYPKVAGQHLAEYYGKRYVSIGTSVYEGQYNVKNSDGEFGP 320 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSEEEEEEHHHHSSSCSCTTTCSSCHHHHHHHHHGGGEEEEEEEEEEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCEEECCCCCCCCCC
T ss_conf 77899999999999870689889995705425677554557554889999884874499999734640512567788663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~v~~~~~~S~E~~l~~~~~~~~~ldlr~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~fDali~i~~~tP~ 400 (403)
T d3b55a1 321 YGTLKSDDPNSYNYIFGQVKKDQFFIDLRKANGVTKTWLNEQHPIFAGITTEGPDIPKTVDISLGKAFDILVQIQKVSPS 400 (403)
T ss_dssp EEECCCCCTTSHHHHHHTSSCSEEEEEGGGCCHHHHHHHTSCEEEECCCSBCBTTBCSEEEECHHHHCSEEEEEEEECBC
T ss_pred EEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEECCCCCC
T ss_conf 02227999988999997369986898764365331557630424045357898666754058859969589996565745
Q ss_pred --C
Q ss_conf --8
Q 001738 683 --V 683 (1019)
Q Consensus 683 --~ 683 (1019)
.
T Consensus 401 ~~~ 403 (403)
T d3b55a1 401 QVH 403 (403)
T ss_dssp CBC
T ss_pred CCC
T ss_conf 369
|
| >d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: L-aspartase-like superfamily: L-aspartase-like family: L-aspartase/fumarase domain: Adenylosuccinate lyase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=100.00 E-value=0 Score=30340.17 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~sP~d~ry~~~~~~~ifs~~~~~~~~l~ve~a~a~a~~e~G~ip~~~a~~i~~~~~d~~~i~~~e~~~~hdv~a~~~~l 80 (402)
T d1dofa_ 1 HVSPFDWRYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVNKASVSADEVYRLERETGHDILSLVLLL 80 (402)
T ss_dssp CCCGGGTTSSCHHHHTTSSHHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHCCCCTTTC--------CHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 92987656498899987294999999999999999999874989889999998723388999999988589804799998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~vH~G~TsnDi~~ta~~l~~r~~~~~l~~~l~~l~~~L~~~a~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~ 160 (402)
T d1dofa_ 81 EQKSGCRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYY 160 (402)
T ss_dssp HHHHCCSCTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 65347888502676487661598999986466788899999999999987640211003765256554229988888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~r~~~rl~~~~~~~~~~~gGa~g~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~rd~~~e~~~~L~~~a~~L~kia 240 (402)
T d1dofa_ 161 ELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLA 240 (402)
T ss_dssp HHHHHHHHHHHHHHHCCBCCCCTTSSCGGGGGGHHHHHHHHHHHTTCCBCSSCSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999875034566552224430445789999887345555235555541001688999888898999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~Di~~~s~~e~ge~~e~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~erd~~~~~~~~~~l~~~~~~~~ 320 (402)
T d1dofa_ 241 VEIRELSRPEIGEVVEGGGGSSAMPHKANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALLALD 320 (402)
T ss_dssp HHHHHHTSTTTCSEESCC---------CCCHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHH
T ss_conf 99999717753541134675410258878428998724378887888999875124432120245655302532599999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~l~~~~~~l~~l~vn~erm~~~l~~s~~~i~ae~~~~~L~~~gl~~~~Ah~~v~~~~~~a~e~~k~~~e~l~~d~~~l~ 400 (402)
T d1dofa_ 321 EILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSLK 400 (402)
T ss_dssp HHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHCC
T ss_conf 99999999876499989999999985158667999999999869999999999999999999958985999860825147
Q ss_pred -C
Q ss_conf -8
Q 001738 683 -V 683 (1019)
Q Consensus 683 -~ 683 (1019)
.
T Consensus 401 l~ 402 (402)
T d1dofa_ 401 LC 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d2g5da1 b.52.1.4 (A:40-441) Membrane-bound lytic murein transglycosylase A, MLTA {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Neisseria gonorrhoeae [TaxId: 485]
Probab=100.00 E-value=0 Score=30340.07 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 p~~p~~~p~pa~~~~~~~~a~~~~vsf~~LpGW~~dd~~~al~af~~sC~~l~~~~~w~~~C~~a~~~~~~~~~aR~Ffe 80 (402)
T d2g5da1 1 PDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFE 80 (402)
T ss_dssp CCCCCCCCCCTTCEEEETTEEEEECCGGGSTTCTTCCHHHHHHHHHHHHHHHTTSTTCHHHHHHHHTSCSSHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 98887899997654567764234546888889740139999999999877503246789999999717998099999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~F~p~~v~~~g~~~Gl~TGYYEP~l~gS~~r~~~y~~PlY~~P~DLv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (402)
T d2g5da1 81 RYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGG 160 (402)
T ss_dssp HHEEEEEEEETTBSCEEEEEEEECEEEEESSCCSSCCEEEEBSCTTCEEEECC--------CEEECCCBTTBCC------
T ss_pred HHCEEEEEECCCCCCEEEEEEECEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 72789998407987525877403057653366888887734589532225555433322222222334455443334444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~dl~~~~~~~~~~~~~gR~~~~~~vPY~~R~eI~~g~l~~~~~elaW~~Dpvd~FFLqIQGSGrl~l~dG~~~rvgY 240 (402)
T d2g5da1 161 THTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGY 240 (402)
T ss_dssp -EEECTTTSCCCSCCSEEEEEEETTEEEECCCHHHHHTTTTTTSSCEEEEESCHHHHHHHHHHSCEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHEEECCCEEEEECCCCEEEEEE
T ss_conf 33354112563222101100102785134776999864875677745788378255352665263699937999899986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ag~NG~pY~sIGr~Li~~G~i~~~~~Smq~Ir~Wl~~nP~~~~ell~~NpsYVFFr~~~~~~~~GP~Ga~gvpLtp~rSi 320 (402)
T d2g5da1 241 ADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELAGSGGDGPVGALGTPLMGEYAG 320 (402)
T ss_dssp EEECCCCCCCHHHHHHTTTSSCTTSCSHHHHHHHHHHCGGGHHHHHTTCCCCEEEEEC-----CCCBCTTSSBCCTTSEE
T ss_pred CCCCCCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 36789965108999976698671128999999999979799999997499749988778888899864367756677046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 AvD~~~iPlG~pv~l~t~~p~~~~~~~rL~iAQDTGgAIkG~~R~D~f~G~G~~Ag~~AG~mk~~G~~~~LlPk~~~p~~ 400 (402)
T d2g5da1 321 AIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEY 400 (402)
T ss_dssp EECTTTSCTTCEEEEEEECTTTCSEEEEEEEEEEECTTCCSSSEEEEEEEESHHHHHHHHHCEEEEEEEEEEETTCCCCC
T ss_pred EECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCC
T ss_conf 61776257887389974577778850027998515765348861698751888999887452575259999528888677
Q ss_pred -C
Q ss_conf -8
Q 001738 683 -V 683 (1019)
Q Consensus 683 -~ 683 (1019)
.
T Consensus 401 ~~ 402 (402)
T d2g5da1 401 RP 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 97
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30339.45 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~gPL~GirVld~~~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~ 80 (402)
T d1xk7a1 1 LPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFL 80 (402)
T ss_dssp CCCCCCSTTTTCEEEEECCSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHH
T ss_conf 98899969999888883780289999999998299599989999997434588516773899859998693978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Lv~~aDv~i~n~rpg~~~~lGl~~~~L~~~nP~lI~~sisgfG~~~~gp~~~~~~~D~~~qA~sG~~~~~G~~~~p~~~ 160 (402)
T d1xk7a1 81 KLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPA 160 (402)
T ss_dssp HHHTTCSEEEEECSSSHHHHTTCCHHHHHHHCTTCEEEEEESSCSSSCTTTTTSCCCHHHHHHHHTSGGGSEETTEECCC
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 98750587534101222113465421001002443213655565776765467777663212210000101455455433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~d~~~g~~aa~ailaAL~~r~~TG~Gq~VdvSm~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~y~~~D 240 (402)
T d1xk7a1 161 FPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCAD 240 (402)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCCCCBBTTBCSSBTTEEEEEETT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 44322123124431345777640345788665443432201344321111000123332222234677422458553146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 G~i~i~~~~~~~~~~l~~~~g~~~l~~dp~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~t~~e~~~~l~~~gvp~apV~ 320 (402)
T d1xk7a1 241 GYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVL 320 (402)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCGGGTTSSSSCTTCCCCBTTTSTTHHHHHHHHHHHHHTSCHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCC
T ss_conf 76211233222222201121001222322233322221000366778899999999865021145566550795010478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~e~~~dpq~~~r~~~~~~~~~~~g~~~~p~~p~~fs~t~~~~~~~aP~lGeht~eIL~eLG~s~~eI~~L~~~gvi~~ 400 (402)
T d1xk7a1 321 TVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKV 400 (402)
T ss_dssp CGGGSTTCHHHHHHTCEEEEECTTSCEEEEECCSSCCSSSCCCCCCCCCCTTTTHHHHHHHTTCCHHHHHHHHHTTSEEC
T ss_pred CHHHHHHCHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEC
T ss_conf 99998779898971999988768997667305770158999887899999985499999986999999999998829868
Q ss_pred -C
Q ss_conf -8
Q 001738 683 -V 683 (1019)
Q Consensus 683 -~ 683 (1019)
.
T Consensus 401 ~~ 402 (402)
T d1xk7a1 401 ED 402 (402)
T ss_dssp CC
T ss_pred CC
T ss_conf 89
|
| >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: N-acylglucosamine (NAG) epimerase domain: N-acyl-D-glucosamine 2-epimerase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=30336.38 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~l~~ilpfW~~~~~D~~~GGf~~~ld~dg~~~~~~k~~~~~~R~l~~fs~a~~~~~~~~~~~~ 80 (402)
T d1fp3a_ 1 MEKERETLQAWKERVGQELDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFHRPEL 80 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 94168999999999999999999878855807678972143789998579886365549999999999997463489899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~a~~g~~~L~~~~~~d~~~Gg~~~~vd~dG~~~~~~k~~Yd~Af~l~a~a~~~~~tg~~~~~~~a~~~~~~i~~~~~~ 160 (402)
T d1fp3a_ 81 LDAAKAGGEFLLRHARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVRE 160 (402)
T ss_dssp HHHHHHHHHHHHHHTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999981883589998898878999967654564120899999899886039989999999999999998421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~g~~~~~~~~~~~~~g~~~~m~l~ea~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 240 (402)
T d1fp3a_ 161 DPSGLGRPQLPGAVASESMAVPMMLLCLVEQLGEEDEELAGRYAQLGHWCARRILQHVQRDGQAVLENVSEDGEELSGCL 240 (402)
T ss_dssp CGGGGCCCCCTTSCCEEETHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHTTEETTTTEECSEEETTSCBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 56888741247875434354179999999997343430579999999999998875016541257764314667666834
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~i~pGh~~e~~wLll~a~~~~~~~~~~~~a~~~~~~~~~~~g~d~~~ggl~~~~~~~g~~~~~~~~~~k~~W~qaE~i 320 (402)
T d1fp3a_ 241 GRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAM 320 (402)
T ss_dssp HHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 47278502359999999999873990479999999999999829557899588875378886655441377787899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~a~l~ly~~tgd~~~l~~a~~l~~~~~~~f~D~~~G~W~~~~~~~g~~~~~~k~~p~~~~YH~~ral~~~~~~l~~~~~~ 400 (402)
T d1fp3a_ 321 IAFLMGYSESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKGGPFKGCFHVPRCLAMCEEMLSALLSR 400 (402)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSSCSSCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987049989999999999999986877999766743899989986677888898461899999999999999851
Q ss_pred -C
Q ss_conf -8
Q 001738 683 -V 683 (1019)
Q Consensus 683 -~ 683 (1019)
.
T Consensus 401 ~~ 402 (402)
T d1fp3a_ 401 LA 402 (402)
T ss_dssp HC
T ss_pred CC
T ss_conf 39
|
| >d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-ERYF species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=0 Score=30336.00 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~f~~dpy~~y~~lr~~gPv~~~~~~g~~~~vvt~~e~v~~vl~d~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T d1z8oa1 1 TVPDLESDSFHVDWYRTYAELRETAPVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPEDV 80 (402)
T ss_dssp CCCBTTSGGGTSSHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCTTEECCTTCCCTTCCCCCGGGTTCCHHH
T ss_pred CCCCCCCHHHHHCHHHHHHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98787974566594999999983499789850895389988999999996497534483112565544564223442667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~l~~~dg~~H~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 160 (402)
T d1z8oa1 81 RNYFATNMGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEK 160 (402)
T ss_dssp HHHHSSSGGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGG
T ss_pred HHHHCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77741562016577776420212210243205677888899999875203222223333212330344556666300377
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~d~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~aG 240 (402)
T d1z8oa1 161 YRGEFGRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAG 240 (402)
T ss_dssp GTTTHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
T ss_conf 88888888889875065112566788899999999988999728887779999985664288787789888888873064
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 320 (402)
T d1z8oa1 241 FEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD 320 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHTCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 54315678888888765058999975013445430155654220244332134567555784134543022334452168
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 p~~f~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 400 (402)
T d1z8oa1 321 PKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 400 (402)
T ss_dssp TTTSSSTTSCCTTSCCTTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCEEEEE
T ss_conf 53278911228899999988989986578139999999999999999967977578887876352787668988557996
Q ss_pred -C
Q ss_conf -8
Q 001738 683 -V 683 (1019)
Q Consensus 683 -~ 683 (1019)
.
T Consensus 401 ~~ 402 (402)
T d1z8oa1 401 DG 402 (402)
T ss_dssp TC
T ss_pred CC
T ss_conf 59
|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: RecA protein-like (ATPase-domain) domain: Extracellular secretion NTPase EpsE species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=30264.35 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~pi~~lv~~ll~~A~~~~ASDIHi~~~~~~~~V~~RidG~L~~~~~~~~~~~~~l~~~~ 80 (401)
T d1p9ra_ 1 DFFSLAEELPQNEDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRV 80 (401)
T ss_dssp CHHHHHHC-------------CHHHHHHHHHHHHHHHHTCSEEEEEEETTEEEEEEEETTEEEEEECCCGGGHHHHHHHH
T ss_pred CHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHH
T ss_conf 95464312787344654257767999999999999982980599981788846999989998887888855699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~a~~~~~~~~~~q~g~~~~~~~~~~i~~Rv~~~p~~~g~~~vlRl~~~~~~~~~l~~LG~~~~~~~~l~~l~~~~~Gl 160 (401)
T d1p9ra_ 81 KVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGI 160 (401)
T ss_dssp HHHTTCCTTCCSSCEEEEEEC-----CEEEEEEEECCTTSCEEEECCEETTTTCCCGGGSCCCHHHHHHHHHHHTSSSEE
T ss_pred HHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCE
T ss_conf 98513678887530120022313894488754442202344566543112332001443013577789999998641054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 iLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~~ 240 (401)
T d1p9ra_ 161 ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLE 240 (401)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHH
T ss_conf 89876787774477999866625787469996267434567887026558767799999999984138889845768759
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ta~~a~~aa~tGhlV~tTlHa~~a~~~~~Rl~~~~~~~~~l~~~l~~vv~QrLv~~lCp~Ck~~~~~~~~~~~~~~~~~~ 320 (401)
T d1p9ra_ 241 TAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSKKK 320 (401)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHTCCHHHHHHHEEEEEEEEEEEEECTTTCEEEECCHHHHTTC-----
T ss_pred HHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 99999999724985899833676676654321002445667777898874205342188867688999999962354545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~~GC~~C~~~Gy~GR~~v~Evl~~d~~l~~~I~~~~~~~~l~~~~~~g~~tl~~~a~~~v~~G~~s~eEv~R~ 400 (401)
T d1p9ra_ 321 EPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRG 400 (401)
T ss_dssp CCCEEEECCCCSSSCSSSEEEEEEEEEEEECCHHHHHHHHTTCCHHHHHHHHHTTCCCHHHHHHHHHHTTSSCHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHC
T ss_conf 66379808996303799888732999998189999999984998999999998099029999999998599989998243
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
+
T Consensus 401 ~ 401 (401)
T d1p9ra_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30262.14 Aligned_cols=1 Identities=0% Similarity=-1.090 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI 80 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 97999889872689999999999998799899996830677898769748977850654541035200799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1iira_ 81 ATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQ 160 (401)
T ss_dssp HHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC---------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
T ss_conf 99999999976147642774124257888988887535422344565445532356412466542100001135566566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d1iira_ 161 SAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPPP 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCCCSSCCEECCCCCCCCCCCCCHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 77877778888999984476410233210231023235644467777654332236755676555677888763148975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l~~~~~~V~hgG~~t~~Eal~~ 320 (401)
T d1iira_ 241 VYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGTTHVAARA 320 (401)
T ss_dssp EEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSSEEEECCCHHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCEEEECCCCHHHHHHHHH
T ss_conf 99715754665689999999999769807984267764233578978997025879999545899963771699999981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~a~~~~~~~~~~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 321 GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 (401)
T ss_dssp TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred CCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
T ss_conf 99999806614179999999987988876847899999999999996979999999999998750839999999999846
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 ~ 401 (401)
T d1iira_ 401 E 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 2-amino-3-ketobutyrate CoA ligase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=30261.56 Aligned_cols=1 Identities=0% Similarity=0.172 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~m~~~~~~~~~~~l~~~~~~g~~r~~~~i~~~~g~~v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~ 80 (401)
T d1fc4a_ 1 GSHMRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA 80 (401)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96044899999999999999759987513304788884893499889998765402546899999999999998198865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~sr~~~g~~~~~~~lE~~lA~~~g~e~al~~~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~d 160 (401)
T d1fc4a_ 81 SVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANND 160 (401)
T ss_dssp SCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTC
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCC
T ss_conf 42131257088999999888761677447734445666789997457886899677643888705122575079975788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~di 240 (401)
T d1fc4a_ 161 MQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDI 240 (401)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCHHCCCCCCCEE
T ss_conf 47899999985514567159997577789895565057898875428189800210145145799850101268888729
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~~tl~Ka~gg~~Gg~v~g~~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g 320 (401)
T d1fc4a_ 241 ITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG 320 (401)
T ss_dssp EEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99651430156776111378789999871792665067888788998875431234689999999987899986401358
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~~~~pIv~v~~~~~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~lg~i 400 (401)
T d1fc4a_ 321 FTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVI 400 (401)
T ss_dssp CCBCCSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76379999879999799999999999999789059758899789998439999787799999999999999999984888
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 ~ 401 (401)
T d1fc4a_ 401 A 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d2h6fb1 a.102.4.3 (B:521-921) Protein farnesyltransferase, beta-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Terpenoid cyclases/Protein prenyltransferases family: Protein prenyltransferases domain: Protein farnesyltransferase, beta-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30261.27 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~t~ts~~q~~~e~~~~~~~~~~~~~~~~~~~~L~r~~H~~y~~~~L~~lp~~~~~lD~~r 80 (401)
T d2h6fb1 1 EPLYSLRPEHARERLQDDSVETVTSIEQAKVEEKIQEVFSSYKFNHLVPRLVLQREKHFHYLKRGLRQLTDAYECLDASR 80 (401)
T ss_dssp CCCGGGSGGGGGGSCCCTTCCCHHHHHHHHHHHHHHHHHHTTCBTTBCCCCCCCHHHHHHHHHHHTTEECGGGGGGTTCH
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCC
T ss_conf 97345467664331468898637889999999999999987534037865532599999999999986988760625462
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~l~yw~l~~L~LL~~~~~~~~~~~ii~~l~~~q~~~GGF~g~pg~~~hla~Ty~Al~~L~ilg~~~~~~~idR~~i~~f 160 (401)
T d2h6fb1 81 PWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQY 160 (401)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHBCTTSSBBSSTTCCBCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 99999999999985998538999999999999718999968999987433999999999997177521023339999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 L~slQ~pDGsF~~~~~ge~D~R~~Y~Av~i~~lL~~~~~~~~~~~~~~I~scQ~~dGGfg~~pg~EaHgg~TfCalAaL~ 240 (401)
T d2h6fb1 161 LYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALV 240 (401)
T ss_dssp HHTTBCTTSCBBSSTTCCBSHHHHHHHHHHHHHTTCCCTTTTTTHHHHHHHHBCTTSSBCSSTTSCCCHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99951888980002367766212699999999958997778999999999806888874578788763539899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 lL~~~~~~d~~~l~~WL~~RQ~~~eGGF~GR~nKlvD~CYSfW~ga~l~lL~~~~~~~~~~~~~~~~~l~d~~~l~~yiL 320 (401)
T d2h6fb1 241 ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYIL 320 (401)
T ss_dssp HHTCGGGSCHHHHHHHHHHTBCTTTCSBBSSTTSCBCTTHHHHTTTHHHHHHHHHHHTTCTTCCSSCCSSCHHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 84788645899999999973778778437887887635788899889999999861246631113333437999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~Q~~~GGf~d~Pg~~pD~yHT~y~L~gLSl~~~~~~~~~~~~~~~~~~~~~l~~~~P~~~i~~~~~~~~~~~f~~~p~ 400 (401)
T d2h6fb1 321 MCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPV 400 (401)
T ss_dssp HHSBCTTSCBCSSTTSCCCHHHHHHHHHHHHHHHEEEETTEEEECCCSSGGGCCCCCCTTTSSCHHHHHHHHHHHHTSCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 97478999948897899870088899999986577676676643235775346633798615889999999999985899
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 ~ 401 (401)
T d2h6fb1 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 9
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=30261.12 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT 80 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 94999889875689999999999998799899997834677898779748976870776421566543378999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1rrva_ 81 VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAA 160 (401)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999844898599982842668999999827974000000000102556423465556532001246788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~v 240 (401)
T d1rrva_ 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAAGSPPV 240 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCCCCCCHHHHHHHHSSSCCE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 77765478999999983785331255430354211011133203577788689788866655459989997522479839
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~I~hgG~~t~~Eal~ 320 (401)
T d1rrva_ 241 HIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATR 320 (401)
T ss_dssp EECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCEEEECCCCHHHHHHHH
T ss_conf 99878644578899999999998626974899505443455457898899731481777621248886177248999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~~~r~~a~~~~~~~~~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 321 AGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDGAAAAADLVLAAVG 400 (401)
T ss_dssp HTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 39998980661208999999998798897574789999999999998497999999999998755179999999999857
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 r 401 (401)
T d1rrva_ 401 R 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 6
|
| >d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450epok species: Sorangium cellulosum [TaxId: 56]
Probab=100.00 E-value=0 Score=30260.62 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~p~~~~dP~~~~~~lr~~gPv~~~~~~~~~vvt~~~~v~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (401)
T d1q5da_ 1 DFKPFAPGYAEDPFPAIERLREATPIFYWDEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMKKYGL 80 (401)
T ss_dssp CCCTTSTTTTTCCHHHHHHHHHHCSEEEETTTTEEEECSHHHHHHHHTCTTEECCGGGSTTHHHHHHSSGGGHHHHHHST
T ss_pred CCCCCCHHHHHCCHHHHHHHHHCCCEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 97989867885949999999846998997999989983999999996598735475433454444655510233013651
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~dg~~h~~~Rk~l~~~fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T d1q5da_ 81 FGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRF 160 (401)
T ss_dssp TTSCHHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 46888889876320421134213566788889888888876531011111578776543101100001100237888888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~l~~l~~~~~~~~~~~~~~i~~~~~~~l~ag 240 (401)
T d1q5da_ 161 GSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAG 240 (401)
T ss_dssp HHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999875112222101677888899999999999877754125644327889876304565207889999999987046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~etta~~l~~~l~~L~~~p~~~e~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~d~~~~g~~ip~G~~v~~~~~~~~r 320 (401)
T d1q5da_ 241 TDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALR 320 (401)
T ss_dssp SHHHHHHHHHHHHHHHHCHHHHHHHHHCGGGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 32024677778999975299999864465323343210000011134433323345620257666764067421002478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 dp~~f~dP~~F~PeR~~~~~lpFg~G~r~C~G~~lA~~e~~~~la~ll~rf~~~~l~~~~~~~~~~~~r~~~~l~v~~~p 400 (401)
T d1q5da_ 321 DGTVFSRPDVFDVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILKP 400 (401)
T ss_dssp CTTTSSSTTSCCTTSCCTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEECCCSSBCCEEECEEESSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCEEEEEC
T ss_conf 82227995434889999999998997558822999999999999999996799848899840678765686645399961
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
+
T Consensus 401 ~ 401 (401)
T d1q5da_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30260.26 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~h~~~~~~~G~vy~wG~n~~GqLG~g~~~~~~~~P~~v~~~~~i~~ia~G~~h~~al~~~G~vy~wG~n~~GQLG 80 (401)
T d1a12a_ 1 KKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALG 80 (401)
T ss_dssp CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTC
T ss_pred CCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCEEECCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCC
T ss_conf 93106678999789889999699988889999886503577908999929999189889999679989999589998877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~g 160 (401)
T d1a12a_ 81 RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASG 160 (401)
T ss_dssp SCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
T ss_conf 44655664235542354220022011100101000345311202145655544666775431001100168850699820
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~~l~~~g~ 240 (401)
T d1a12a_ 161 NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 240 (401)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEEECCCE
T ss_conf 35225650378500346687662288875344567755544335652000035677778439999936876999955981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n~~gqlG~g~~~~~~~~P~~ 320 (401)
T d1a12a_ 241 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTL 320 (401)
T ss_dssp EEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEE
T ss_pred EEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 86512221020354566310000010123554036999851012013561489788840334675678862333558888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 i~~~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~~~v~~v~~G~~hs~~l~~d~~~ 400 (401)
T d1a12a_ 321 ISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQ 400 (401)
T ss_dssp CCSSSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTEEEEEEEECSSEEEEEEEECSC
T ss_pred CCCCCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCEEEECCCCCCCEEEEEEECCCEEEEEEECCCC
T ss_conf 57999829999308879999489969999259988778999988860789643578998899999752439999979966
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
+
T Consensus 401 ~ 401 (401)
T d1a12a_ 401 S 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Hormone binding domain of the atrial natriuretic peptide receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=30259.71 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~a~~~~~i~igvllP~tg~~~~~~~~~~~a~~lAv~~iN~~g~~~~~~~~g~~i~~~~~D~~~~~~~~~~~~~~l~~~~~ 80 (401)
T d1jdpa_ 1 EALPPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARG 80 (401)
T ss_dssp CCCCCCEEEEEEEECSSTTSTTCHHHHHHHHHHHHHHHCC-----CCSCTTCEEEEEEEECTTSTHHHHHHHHHHHHTTT
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99899722899997799940221678999999999999866786556789948999998289997999999999997366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~v~~iiG~~~s~~~~a~~~~~~~~~ip~is~~~~~~~~~~~~~~~~~~fr~~~~~~~~~~al~~~l~~~~~~~v~il~~ 160 (401)
T d1jdpa_ 81 AKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYS 160 (401)
T ss_dssp CCCSEEECCCSHHHHHHHHHHHHHHTCCEEESCCCSGGGGCTTTTTTTEEECSCCHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 88089999987503678878888619854631445542122345677279831546889999999877517737999995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~i~~~~~~~g~~~~~~~ 240 (401)
T d1jdpa_ 161 DDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYA 240 (401)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHTCEEEEEEECTTSCCCHHHHHHHHHHHCSEEEEESCHHHHHHHHHHHHHTTCTTTTCE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 68652057899998888736534899740245676268999998632574069999346889999999998188888769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~a~~~yDav 320 (401)
T d1jdpa_ 241 FFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAI 320 (401)
T ss_dssp EEEECSSCCCSTTTCTTCCSSTTHHHHHHHGGGEEEEEECCCCCHHHHHHHHHHHHHHHTTTCCCCSSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 99633114643347301025542367888865414212458898689999999999984067776666207889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~l~a~Al~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~v~fd~~Gdr~~~~~~~~~~~~~~g~~~~Vg~~~~~~~~~~~~ 400 (401)
T d1jdpa_ 321 LLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMR 400 (401)
T ss_dssp HHHHHHHHHHHHTTCCTTCHHHHHHHHSSEEEEETTEEEEECTTSBBCCEEEEEEEEETTTTEEEEEEEEETTTTEEEEC
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEE
T ss_conf 99999999998568999889999999867917717668998999882576799999997898799999998997669974
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 ~ 401 (401)
T d1jdpa_ 401 P 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]
Probab=100.00 E-value=0 Score=30259.41 Aligned_cols=1 Identities=100% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~ai 80 (401)
T d7aata_ 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 97010689799986999999983778999588617877688899898789999999996289888889977789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T d7aata_ 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCC
T ss_conf 99984247865576753885462578899999876674358985599816777640258998599689985424446665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 240 (401)
T d7aata_ 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 37888888722777618999647889855458999999999987356379998636144314886553356666532201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (401)
T d7aata_ 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 13406751330005515531021261888889888888888764033563057888998841787889999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~gV~~~pg~Ris~a~~~~~~i~~la~ai~~v~ 400 (401)
T d7aata_ 321 RIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999857988863577997589953979999999998299998897179852699888999999999974
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 k 401 (401)
T d7aata_ 401 K 401 (401)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d2r7da2 b.40.4.16 (A:3-403) Ribonuclease II family protein DR0020 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Ribonuclease II family protein DR0020 species: Deinococcus radiodurans [TaxId: 1299]
Probab=100.00 E-value=0 Score=30258.57 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~p~~~~~~~v~ve~~~~~~~~~~~i~~~lg~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 80 (401)
T d2r7da2 1 QPELTPAQRTEVELLARGRADKSRVLRDLKLPETPEAAHALLLRLGVWDEARTPYADRLRAALNAVELPVPDFDPAEERL 80 (401)
T ss_dssp CCCCCHHHHHHHHHHHTTSCSCCHHHHHTTCCCSHHHHHHHHHHHTSSCTTCCCHHHHTTCCCSCCCCCCCCCCTTSCCE
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99899888899998123899973124522999996569999998199865566780999999863267888743334661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Dlr~l~~~tID~~~a~D~DDAisie~~~~g~~~l~VHIADVs~~v~~~s~Ld~eA~~R~tSvYlp~~~~pMLP~~ls~~~ 160 (401)
T d2r7da2 81 DLTHLPTFAIDDEGNQDPDDAVGVEDLGGGLTRLWVHVADVAALVAPDSPLDLEARARGATLYLPDRTIGMLPDELVAKA 160 (401)
T ss_dssp ECTTSCEEEEECTTCCCCCEEEEEEECSTTCEEEEEEEECGGGTCCTTSHHHHHHHHHCBCEECSSCEECSSCHHHHHHH
T ss_pred CCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHCCC
T ss_conf 52028679988998864421036787479968999961356662067776899999858464089972423758874132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 SL~~~~~r~als~~~~ld~~g~i~~~~~~~s~I~~~~ltY~~v~~~~~~~~~~l~~l~~~~~~l~~~R~~~gal~~~~~~ 240 (401)
T d2r7da2 161 GLGLHEVSPALSICLDLDPDGNAEAVDVLLTRVKVQRLAYQEAQARLEAGEEPFVTLARLARASRRLREGEGALSIDLPE 240 (401)
T ss_dssp STTSSSSEEEEEEEEEECTTSCEEEEEEEEEEECEEEEEHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 24567566541147887267872332488878998301277899886314136788888999999999866884335654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~d~~~~~~~~~~~~~s~~lVeE~MilAN~~~A~~l~~~~~p~iyR~~~~p~~~~~~~~l~~~~~~~~~~~~a~ys~ 320 (401)
T d2r7da2 241 VRVKADETGASVFPLPKPEMRTVVQECMTLAGWGTAIFADDNEIPLPFATQDYPTREVAGDTLPAMWARRKTLARTRFQP 320 (401)
T ss_dssp EEEEEETTEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCCSSCCCCCSHHHHHHHHHHCCCEEEES
T ss_pred CEEEECCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCEEEECC
T ss_conf 20221367751002541312456676765301548999864368753103678824432110788887640044006758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~H~gLgl~~YthfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~l~~~~~~~~~~~~~~~~~er~~~~~~~~~yl~~~ 400 (401)
T d2r7da2 321 SPGPHHGMGLDLYAQATSPMRRYLDLVVHQQLRAFLAGRDPLSSKVMAAHIAESQMNADATRQAERLSRRHHTLRFIAAQ 400 (401)
T ss_dssp SCCCBTTTTBSCCCCCSCTTTBHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98867110678606269725405789999999999769999999999999999999999999999999999999999859
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
.
T Consensus 401 p 401 (401)
T d2r7da2 401 P 401 (401)
T ss_dssp T
T ss_pred C
T ss_conf 2
|
| >d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp154a1 monooxygenase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30257.82 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~dp~~~d~~~~~~~lr~~Gpv~~~~~~g~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1odoa_ 1 ALVLDPTGADHHTEHRTLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVEN 80 (401)
T ss_dssp CEECCTTCTTHHHHHHHHHTTCSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCS
T ss_pred CEECCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 94358899981999999996399899964991199988999999996397724366666532223455541123304787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~~~g~~h~~~R~~l~~~fs~~~v~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~ 160 (401)
T d1odoa_ 81 MFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDG 160 (401)
T ss_dssp GGGCCHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 62388599999999877651721477777788999999976422013332222321000000011221235653112123
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~l~~~g~~t 240 (401)
T d1odoa_ 161 FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYET 240 (401)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 44455554310102578899999999999987664136776642232112333334689799999999999998656521
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~e~~R~~p~~~~~~~~~~~~d~~~~~G~~ip~Gt~v~~~~~~~hrd~ 320 (401)
T d1odoa_ 241 TVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHP 320 (401)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHTSSCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCHHHHHCCC
T ss_conf 02355543201343214431001233311000001111112455333322346525229779617952324488870772
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 321 ~~~~dp~~F~PeR~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~ 400 (401)
T d1odoa_ 321 DWHEDADTFDATRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLH 400 (401)
T ss_dssp TTSTTTTSCCTTCSCCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 22896543287878999987789884783599999999999999999779868899877771467875579874059983
Q ss_pred C
Q ss_conf 8
Q 001738 683 V 683 (1019)
Q Consensus 683 ~ 683 (1019)
-
T Consensus 401 ~ 401 (401)
T d1odoa_ 401 A 401 (401)
T ss_dssp -
T ss_pred C
T ss_conf 9
|
| >d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate transeliminase domain: Pectate transeliminase species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=0 Score=30183.64 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~YVs~~Gsd~~~Gs~~~p~~tIq~Ai~~a~~GDtI~v~~GtY~~~~~~~~~~~~~~~~~G~~~~ 80 (400)
T d1ru4a_ 1 ADCSSDLTSGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGA 80 (400)
T ss_dssp CCCTTCTTTTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTB
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCEEECCCEEEEEECCCCCCC
T ss_conf 97532000564447769997998679998722447889999983899599998695516651205753899723777897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~i~i~~~~~~~~vi~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~n~~i~~~~~~g~~~~~~~ 160 (400)
T d1ru4a_ 81 PIYVAAANCGRAVFDFSFPDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQGAYVIGSHNTFENTAFHHNRNTGLEINNGG 160 (400)
T ss_dssp CEEEEEGGGCCEEEECCCCTTCCCTTCCSEEECSSCEEEESEEEESCSSCSEEECSSSCEEESCEEESCSSCSEEECTTC
T ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCEEEECCEEECCCCEEEEECCCCCCCCCCEEECCCCCEEEEECCC
T ss_conf 29996079972599587623343323431787447479944342067111222023421024526852775117885555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~G~~~~~~~~~~~i~nn~~~~n~~~~~~~~~~ 240 (400)
T d1ru4a_ 161 SYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAF 240 (400)
T ss_dssp CSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTC
T ss_pred CCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEECCCCEEEECEEEECCCCCCCCCCCC
T ss_conf 42179974677134565442222024689612566166433566426766368824898799775998654101456430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~n~~~~n~~~g~~~~~~~~~~~i~nN~~~~n~~~~~~~~~~~~~~~~~~~nN~~~~~~~ 320 (400)
T d1ru4a_ 241 AGNGNGFKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQSGQKHYFRNNVSLSASV 320 (400)
T ss_dssp CCCCCSEECCCTTCCCCCEEESCEEESCSSEEEECTTCSSCCEEESCEEESSSEEEEECSCCCTTCCEEEESCEEESSCE
T ss_pred CCCCCEEECCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCE
T ss_conf 01373365047776665589877886366553040357664112265687255430343223567650798328834740
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~Spai~aG~~~~~~~~~G~~pDiGAyE~~ 400 (400)
T d1ru4a_ 321 TVSNADAKSNSWDTGPAASASDFVSLDTSLATVSRDNDGTLPETSLFRLSANSKLINAGTKESNISYSGSAPDLGAFERN 400 (400)
T ss_dssp EECSEEEESSTTTTSCCCCGGGBSBCCGGGGGCCCCTTCCCCCCSBTCBCTTCTTTTCSCCCTTCCCSTTSCCSSSCCCC
T ss_pred EEECCCCCCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34134323522546730147761674643244656777767768884378998100487877788989986776777588
|
| >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: G proteins domain: Interferon-inducible GTPase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=30183.63 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~dl~ss~~~~~~~~~~~~~~l~~e~~~~i~~~~~~~~~~~~~~~i~~~l~~~~~~~l~Iai~G~~n~GKSSLiNaL~G~~ 80 (400)
T d1tq4a_ 1 NDLPSSFTGYFKKFNTGRKIISQEILNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIG 80 (400)
T ss_dssp CCHHHHHHHHHTTSCGGGCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCEEEEEEECTTSSHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 96178899999877654004409899999998861777989999999997443677179998999997899999995888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~g~~~tT~~~~~~~~~~~~~~~l~DtPG~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~d~~l~~~l~~ 160 (400)
T d1tq4a_ 81 NEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISM 160 (400)
T ss_dssp TTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCSEEEEEESSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 67775678999887044553110689707998379854333449999987433226599996588887889999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~k~~~~V~nK~D~~~~~~~~~~~~~~~~e~~l~~ir~~~~~~l~~~~~~~~~vflvS~~~~~~~d~~~L~~~l~~~L~~ 240 (400)
T d1tq4a_ 161 MKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFPVLMDKLISDLPI 240 (400)
T ss_dssp TTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHHHHHHTTCSSCCEEECCTTCTTSTTHHHHHHHHHHHSCG
T ss_pred CCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 69987999708632101354322011227889999999999999874899897797337764515899999999998399
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~l~~~~~~~i~~K~~~~~~~i~~~a~~a~~~~~iP~p~~~~~~d~~~l~~~l~~y~~~fGlD~~sL~~lA~~ 320 (400)
T d1tq4a_ 241 YKRHNFMVSLPNITDSVIEKKRQFLKQRIWLEGFAADLVNIIPSLTFLLDSDLETLKKSMKFYRTVFGVDETSLQRLARD 320 (400)
T ss_dssp GGHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHTCCBSSCTTSSCCCHHHHHHHHHHHHHHHHHTTCSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99999998516657999999899999999999999734246886303201329999999999999809998999999999
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~~lka~iks~~~~~~~~~~~i~~~l~k~~~~~~~~~G~~~a~~~~f~~~~~l~~~~l~~~aedak~~l~~~~~~n 400 (400)
T d1tq4a_ 321 WEIEVDQVEAMIKSPAVFKPTDEETIQERLSRYIQEFCLANGYLLPKNSFLKEIFYLKYYFLDMVTEDAKTLLKEICLRN 400 (400)
T ss_dssp SSSCHHHHHHTCSHHHHTSSCCHHHHHHHHHHHHHHHHHHHCCSSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 29989999999708366555567899999999887883052389999999999999999999999999999999986559
|
| >d3ovwa_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Fusarium oxysporum [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Fusarium oxysporum [TaxId: 5507]
Probab=100.00 E-value=0 Score=30183.07 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 q~~~~t~E~HP~ltwq~CT~~ggCt~~~g~vV~D~nwrw~h~~~g~~~c~~gn~w~~~lCpd~~tCa~nC~ldGad~~~y 80 (400)
T d3ovwa_ 1 ETPDKAKEQHPKLETYRCTKASGCKKQTNYIVADAGIHGIRQKNGAGCGDWGQKPNATACPDEASCAKNCILSGMDSNAY 80 (400)
T ss_dssp CEECSSCCCCCEEEEEEEETTTEEEEEEEEEEECHHHHCEECTTSCBSCCTTSCCCTTTCSSHHHHHHHCEECCCCHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCEECCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887676588523265058998586233499824733244058973234388565344887566676435237664555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~GVttsG~sLtl~~vt~~~~vGsRvYLl~~d~~~Yqmf~Llg~EfTFdVD~S~lpCGlNgALYfveM~adGg~s~~~~ 160 (400)
T d3ovwa_ 81 KNAGITTSGNKLRLQQLINNQLVSPRVYLLEENKKKYEMLHLTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGKSTSRN 160 (400)
T ss_dssp HHTTEEEETTEEEEESEETTEECCCEEEEECTTSSSBCEECCTTCEEEEEEECTTCCTTEEEEEEEECCCTTTTGGGCTT
T ss_pred CCEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 40569953881899857548832621899757877357899338678888633568764322565662167778666788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 n~aGAkYGtGYCDAQC~d~kfInG~aNv~g~GsCC~EmDIwEANs~a~a~TpH~C~~~g~~~C~g~~Cg~~g~CD~~GC~ 240 (400)
T d3ovwa_ 161 SKAGAYYGAGYCDAQCYVTPFINGVGNIKGQGVCCNELDIWEANSRATHIAPHPCSKPGLYGCTGDECGSSGICDKAGCG 240 (400)
T ss_dssp CCCTGGGTCCCCBTTCCBCSEETTEECTTCCEEECCEEEEEEECSSCEEEEEECBSSCSCEEECGGGGSTTSSBCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 76666367722113156243205621346655555641101110455320688656787336457767888860888867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 fNpYR~g~~~FyG~G~~~tVDT~k~fTVVTQF~~~~~G~L~eIrR~YVQ~GkvI~n~~~~~~g~~~~~sit~~fC~~~~~ 320 (400)
T d3ovwa_ 241 WNHNRINVTDFYGRGKQYKVDSTRKFTVTSQFVANKQGDLIELHRHYIQDNKVIESAVVNISGPPKINFINDKYCAATGA 320 (400)
T ss_dssp BCGGGGTCTTSEESSTTSSEETTSCEEEEEEEEECTTSCEEEEEEEEEETTEEEECCCCCSSSSCSCSSBCHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 67433488754878987142379973899788708985368998999609999668875677887677346677546786
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~f~~~GGl~~mg~al~rGmVLv~SlWdd~~~~M~WLDsg~~GpC~~tsg~p~~ve~~~p~a~Vt~SNIKfG~I~STy~~ 400 (400)
T d3ovwa_ 321 NEYMRLGGTKQMGDAMSRGMVLAMSVWWSEGDFMAWLDQGVAGPCDATEGDPKNIVKVQPNPEVTFSNIRIGEIGSTSSV 400 (400)
T ss_dssp HHHHHTTHHHHHHHHHHHCEEEEEEEEECTTTTTHHHHBTTSCSBCSSTTSHHHHHHHCSSCEEEEEEEEEESTTCSCCC
T ss_pred CHHHHCCCHHHHHHHHCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCCCC
T ss_conf 42443476889888850886999986847999866204898878888888855651328997799860768577763119
|
| >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Carbohydrate phosphatase superfamily: Carbohydrate phosphatase family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like domain: Inositol polyphosphate 1-phosphatase species: Cow (Bos taurus), brain [TaxId: 9913]
Probab=100.00 E-value=0 Score=30180.60 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~l~~~l~~aekAa~iar~~~~~~~l~~~~v~ek~~~~~~~k~~~D~VT~AD~~aq~~I~~~L~~~fP~~~~~IvGEE 80 (400)
T d1inpa_ 1 MSDILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEE 80 (400)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHSHHHHTCCCCSCCCCTTTTCCCCHHHHHHHHHHHHHHHHHHHHHSTTGGGGEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf 96899999999999999999998501687767643136534626799984189999999999999987869999988158
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~IDPIDGT~~ 160 (400)
T d1inpa_ 81 SNELTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQ 160 (400)
T ss_dssp CSEEECTTSCEEECCCCSSCSCHHHHHHHHTTTCTTHHHHHHHHHTCCCCCCCSSSSSCCCCCCGGGEEEEEEEEECHHH
T ss_pred CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
T ss_conf 88654544311122024136666666543114542023342023231100011001232356787656299952758420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Fi~G~~~~~v~iaL~~~~~~~v~vlI~lal~~~G~Pv~GvI~~P~~~~~~~~~~~~G~~~~a~~g~Ga~~~~~~~~~~~~ 240 (400)
T d1inpa_ 161 YIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTR 240 (400)
T ss_dssp HHHCCCCCCCBTTBCSSSGGGCEEEEEEEETTTCCEEEEEEEEEEEEECTTTCCEEEEEEEEEESSSEEECCSCCTTSST
T ss_pred HCCCCCCCEEEEEHHCCCCCCCEEEEEEHHEECCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 12699643255500126665313565201007897898475455446400023678428997437673236766665544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~g~a~~k~~~VA~G~~D~yl~~~~~~~~WD~aA 320 (400)
T d1inpa_ 241 SNSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCA 320 (400)
T ss_dssp TTSSCSSCCCCBTTBTTSSSSCCEEEECTTCCSCCCCTTTTCCEEEECCCHHHHHHHHHHTSCSEEEECSSCCBHHHHHH
T ss_pred CCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
T ss_conf 44322201025675333454047850345389999999747954997558899999996899888995578998788799
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 g~~Il~eaGG~VtD~~G~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~N~~giIA~~~~~~h~~~l~~l~~~l~~~~~~~ 400 (400)
T d1inpa_ 321 AHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQHLAPVATHT 400 (400)
T ss_dssp HHHHHHTTTCEEEEHHHHHHSCTTSSCSTTBCCSSCCSTTTTTTCTTBCTTCEEEESCHHHHHHHTCCCTTTCCCCSCCC
T ss_pred HHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999978997987999962466544445210014443223553101556878997888999999999997633546789
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=100.00 E-value=0 Score=30178.13 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~viYe~~v~~f~~~Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dl 80 (400)
T d1eh9a3 1 FNNETFLKKEDLIIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGF 80 (400)
T ss_dssp CCSCCSCCSSSCCEEEECTTTSSSSCSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHH
T ss_pred CCCCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99877688768599998312307899999999875899975998899687676889999997877778858221999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 k~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gvDGfR 160 (400)
T d1eh9a3 81 RKLVDEAHKKGLGVILDVVYNHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFR 160 (400)
T ss_dssp HHHHHHHHHTTCEEEEEECCSCCCSSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999997637713542244642577850443100211234545564435565556079999999999887524663688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (400)
T d1eh9a3 161 LDAVHAIIDTSPKHILEEIADVVHKYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDDFHHSIHAYLTGERQGYYTDFG 240 (400)
T ss_dssp ETTGGGCCCCSSSCHHHHHHHHHHHTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHHHHHHHHHHHSCCCSGGGGGCC
T ss_pred EECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHH
T ss_conf 60434415114565589999987533222110100468442564553352000212665310467665033210145444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~~~~~~~~~~~~~~~~~~~~~a~a~~l~~pGi 320 (400)
T d1eh9a3 241 NLDDIVKSYKDVFVYDGKYSNFRRKTHGEPVGELDGCNFVVYIQNHDQVGNRGKGERIIKLVDRESYKIAAALYLLSPYI 320 (400)
T ss_dssp SHHHHHHHHHSSCSCSSEEETTTTEEECCCCCSCCGGGEECCSCCHHHHHTTTTCCCGGGGSCHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 35789987543211221478999874465233304400443122046553356401267776656778999999848997
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 P~iy~G~E~G~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Li~lRk~~pv~ 400 (400)
T d1eh9a3 321 PMIFMGEEYGEENPFYFFSDFSDSKLIQGVREGRKKENGQDTDPQDESTFNASKLSWKIDEEIFSFYKILIKMRKELSIA 400 (400)
T ss_dssp CEEESSGGGTCCCCCCCCCCCCSTTHHHHHHHHHHHHTCCCSCTTSHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHTCS
T ss_pred CEEECCHHHCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 78977853288898875010266877666676405766789876552346556677657899999999999999678699
|
| >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2, PBP2 species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=30177.56 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~y~~~~d~v~~~l~~~~~~~~~~~~~~~~~G~~I~TTlD~~lQ~~ae~~l~~~~~~~~~~~~~a~vvvd~~TG~I 80 (400)
T d2olua2 1 TNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTNMDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGL 80 (400)
T ss_dssp CCCSGGGHHHHHHHHHHHTTSTTTTTSCHHHHTTBCCEEEECCCHHHHHHHHHHHHHCSCCSSTTEEEEEEEEETTTCBE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCE
T ss_conf 99877557999999999986128766567786679988995889999999999998534214867528999998899959
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 lAm~~~~~y~~~~~~n~~~~~~~pGStfKp~v~~aaale~g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~G~v~l~~Al~ 160 (400)
T d2olua2 81 VAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDALR 160 (400)
T ss_dssp EEEECSTTCCTTTSCCTTTSCEECGGGGHHHHTHHHHHHHTCCCTTBEEECCSSEEETTEEECCTTSCCCCEEEHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99997888883233321000003666556178899986458721110013334421111013366655553334322355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~S~N~~~v~l~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~lg~g~~~vtplqlA~aya~iANgG~~~~P~~v~~i~~ 240 (400)
T d2olua2 161 QSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVT 240 (400)
T ss_dssp TTCHHHHHHHHHHHHHHTCTTHHHHHHHHTTCCCSSCCCHHHHTTCTTCEECHHHHHHHHHHHHTTSEEECCBCEEEEEC
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCC
T ss_conf 66511123200010024567889999987088731121100000123456778886400100005964787674011356
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~g~~v~~~~~~~~v~s~~~a~~l~~~l~~vv~~~Gt~~~~~~~g~~vagKTGTa~~~~~~~~~~~~~~~~~~daWFvG~ 320 (400)
T d2olua2 241 RDGETIEYDHTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGF 320 (400)
T ss_dssp TTSCEEECCCCEEECSCHHHHHHHHHHHHGGGSTTSTTTTCCCSSCCCEEEEEEECCCHHHHHHTTCCTTEESEEEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 43232222222222113789999976521433541000111357814777611144576576544566687640799983
Q ss_pred -------------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~P~~~~~VwvG~d~~~~~~~~~~~~~~~~~~~a~i~~~~m~~~~~~~~~~f~~P~~v~~~~p~~~~~~~~~~~~~~~~~~ 400 (400)
T d2olua2 321 TPQYTMSVWMGFSKVKQYGENSFVGHSQQEYPQFLYENVMSKISSRDGEDFKRPSSVSGSIPSINVSGSQDNNTTNRSTH 400 (400)
T ss_dssp CSSEEEEEEEEESSCCGGGTTSEESHHHHTHHHHHHHHHHHHHSCCSCCCCCCCTTEESCTTCCEETTCCCSSBCCCCCC
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 69969999984688875676765676433579999999999975689666999998766777554789999998888889
|
| >d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Old yellow enzyme (OYE) species: Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
Probab=100.00 E-value=0 Score=30106.79 Aligned_cols=1 Identities=100% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~p~~~~~~~LFsP~~Ig~~~lkNRiv~apm~~~~a~~~G~~~~~d~~i~yy~~rA~GG~GlIi~e~~~V~~~g~ 80 (399)
T d1oyaa_ 1 SFVKDFKPQALGDTNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAG 80 (399)
T ss_dssp CBCTTCCCCCCTTSGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEEEEEEESSGGGC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCEEECCCCC
T ss_conf 97455888889999999973289988637668777667757899897987999999999972890799964377776547
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~l~~d~~i~~~k~l~~~vh~~Ga~i~~QL~H~Gr~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~p~~ 160 (399)
T d1oyaa_ 81 GYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHS 160 (399)
T ss_dssp CCTTSCBSSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCEEESCSSCCSCHHHHHHHHHTTCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 78998745787998888699999975201221233220234574211334445667543566777777666567887520
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 mt~~eI~~ii~~f~~AA~rA~~AGfDgVEIH~aHGYLl~qFLSp~tN~RtDeYGGSlENR~Rf~~Eii~aIR~~vg~~~I 240 (399)
T d1oyaa_ 161 LTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKV 240 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC
T ss_conf 15677888888999999999980975676124377789986413035665224765665457799998754340222574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 gvRls~~d~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~PV 320 (399)
T d1oyaa_ 241 GLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPV 320 (399)
T ss_dssp EEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSCTTSCTTSSCCCSCCTTHHHHHCCSCE
T ss_pred EEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 47853022025667741000577899999889874324543441122146677755454432111268999999829988
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 i~~G~i~~~~~~~~~i~~~~aDlV~~gR~liaDP~l~~K~~~G~~ln~~d~~~~~~~~~~gyt~~p~~~~~~~~~~~~~ 399 (399)
T d1oyaa_ 321 IRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMSAHGYIDYPTYEEALKLGWDKK 399 (399)
T ss_dssp EEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSCSSSTTTTCCCCHHHHHHTTSSCC
T ss_pred EEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 9978989869999999759981848879999791299999729998999653267899988084845499997489999
|
| >d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cytochrome P450-NOR, nitric reductase species: Fungus (Fusarium oxysporum) [TaxId: 5507]
Probab=100.00 E-value=0 Score=30104.78 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~p~~~~~~~dP~~~~~~Lr~~gPv~~~~~~~g~~~~vvt~~~dv~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1jfba_ 1 APSFPFSRASGPEPPAEFAKLRATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKP 80 (399)
T ss_dssp CCBSSCCCSSTTSCCTHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899898766596899999996399688763789569997699999999769763547654567654544211012477
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 160 (399)
T d1jfba_ 81 TFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFNDL 160 (399)
T ss_dssp CGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred CHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 32226869999987400764566532111026789899887454321244431024566655667788887651000036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~~~~~~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt 240 (399)
T d1jfba_ 161 EYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNATM 240 (399)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 78888766531000027899999999999999999998630245544322222223577762112212334322002015
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~l~~~~~~L~~~pe~~~~L~~e~~~~~~~~~e~lr~~~~~~~~~~R~~~~~~~~~g~~ip~G~~V~~~~~~~~~dp~~ 320 (399)
T d1jfba_ 241 VNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEV 320 (399)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHH
T ss_conf 66999999998456589999741345321101101232223433333222013334577676653211114451578422
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~dP~~F~PeR~~~~~~~lpFG~G~r~C~G~~lA~~el~~~l~~Ll~rfp~~~l~~~~~~~~~~~~~~~~g~~~lpv~~ 399 (399)
T d1jfba_ 321 FENPDEFNMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVIF 399 (399)
T ss_dssp SSSTTSCCTTCCCCSSCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCCCCEEEC
T ss_conf 7996445868889999886889997368069999999999999999967967899887776467787777871351039
|
| >d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp158a2 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=0 Score=30103.68 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~p~~~~~~~~~~~~~~~~p~~~~lr~~gPv~~~~~~~g~~~~wvvt~~e~v~~vl~d~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T d1s1fa_ 1 QAVPPVRDWPAVDLPGSDFDPVLTELMREGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLAPHFI 80 (399)
T ss_dssp CCSCCEEECCCCCCCTTCCCHHHHHHHHHCSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCBSSSSCS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99899899887789999989999999971996898416886588996599999999769764456555555444561001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~Dg~~H~~~Rr~l~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~~~~~ 160 (399)
T d1s1fa_ 81 PARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICELMGVPATD 160 (399)
T ss_dssp SCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred CCCCCHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHEEHHCCCCCHHH
T ss_conf 33452010586778999987484347412678999999999998620234565032024554433430001104883455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~tT~ 240 (399)
T d1s1fa_ 161 RHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVT 240 (399)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 44566677887512232046788888899999999987630223201232001256655507777777888751342222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~~l~~l~~~p~~~~~~~~~~~~~~~~~~e~~r~~p~~~~~~~~R~~~~~~~l~G~~ip~Gt~V~~~~~~~~rdp~~ 320 (399)
T d1s1fa_ 241 NNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEV 320 (399)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHCGGGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred CCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCEECCCCCCCCCCHHH
T ss_conf 20222122343085155431232013532122211246632223432100002540533533897501233334668110
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~dP~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~~~~rg~~~lpv~~~~ 399 (399)
T d1s1fa_ 321 FPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWHA 399 (399)
T ss_dssp SSSTTSCCTTC--CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEEEC
T ss_conf 6995444889999997777988617815999999999999999997798788889666525168744287047899849
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=100.00 E-value=0 Score=30102.54 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~syRIPsLv~~~GtlLA~ae~R~~~~~D~~~idiv~rRS~D~GkTWs~~ 80 (399)
T d2ah2a2 1 LAPGSSRVELFKRQSSKVPFEKDGKVTERVVHSFRLPALVNVDGVMVAIADARYETSFDNSLIDTVAKYSVDDGETWETQ 80 (399)
T ss_dssp CCTTCEEEEEECTTTCEEEEEETTEEEEEECSEEEEEEEEEETTEEEEEEEEESSCSCSSSCEEEEEEEESSTTSSCEEE
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCE
T ss_conf 98886434203788765775568988985699991308999899999999179888998720378998532788578762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~v~~~~~~~~~~~~dP~~v~d~~~i~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~g~tWs~p~~i~ 160 (399)
T d2ah2a2 81 IAIKNSRASSVSRVVDPTVIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLK 160 (399)
T ss_dssp EEECCCCSSTTCEEEEEEEEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCCEECG
T ss_pred EEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 89724777776666688599849969999997658886221125788876258977998646798366773258832056
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~gi~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G~TW~~g~~~~~~~~~~~~v~~~dG~l 240 (399)
T d2ah2a2 161 EFFPAEMEGMHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSAFGCSEPVALEWEGKL 240 (399)
T ss_dssp GGSCSEETTEEEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCCTTCEEEEEEEETTEE
T ss_pred CCCCCCCCCCCCCEECCCCCCEEEECCCCEECCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCEE
T ss_conf 53465335753100526775303304863731337534887468899995899851683465589875566300358818
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ll~~R~~~g~r~v~~S~DgG~TW~~~~~~~~~v~~~~~~~~~~~~~~~li~~~~~~~~~lLfsnp~~~~~~~~r~~l~l~ 320 (399)
T d2ah2a2 241 IINTRVDYRRRLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTIEGMRVMLFTHPLNFKGRWLRDRLNLW 320 (399)
T ss_dssp EEEEECTTSCCCEEEESSTTSSCEECTTTTTTCBCSSTTSCSCCCCCCEEEEEETTEEEEEEEEECCSSCTTCCBCEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 99876278740699974898625433454433437776667874453135741389729999798886454435642899
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Sdd~g~~w~~~~~i~~g~saYS~L~~~dg~ig~lYE~~~~~~~~i~f~rlT~el~~ik~v~~~w~~~d~~~~~~~~~~ 399 (399)
T d2ah2a2 321 LTDNQRIYNVGQVSIGDENSAYSSVLYKDDKLYCLHEINSNEVYSLVFARLVGELRIIKSVLQSWKNWDSHLSSICTPA 399 (399)
T ss_dssp EESSSCEEEEEECSCTTCBCCCEEEEEETTEEEEEEEEEETTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred EECCCCCCCCCCEEECCCCCCCCEEEEECCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8579984214722855898542576758998999998589970059983687899999999998987547874478899
|
| >d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=30102.49 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~G~As~~~gttGG~~a~~~~v~~v~t~~el~~~l~~~~~~~P~vI~~~gti~~~~~~~~~~~~~~~~~~ 80 (399)
T d1bn8a_ 1 ADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKD 80 (399)
T ss_dssp CCGGGCCCCTTSSGGGSTTCCCTTTTCCGGGEEEECSHHHHHHHHCCTTCCSCEEEEECSEEESSBCTTCCBCCHHHHCC
T ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCC
T ss_conf 95211113688750504898677887787746830889999999862369986699986679425665654444454334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~SNkTIiG~G~~~~i~g~gl~i~a~NVIirnl~i~ 160 (399)
T d1bn8a_ 81 PEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEFQ 160 (399)
T ss_dssp TTCCHHHHHHHTCHHHHCSSCCCSHHHHHHHHHHHHHHHHHEEEECSSEEEEECTTCCEEESCEEEECSEEEEEESCEEE
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEECCEEEEECCEEEEECEEEE
T ss_conf 33353322234574342034666654322111021435522785279864984589708954579983746999592997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~DaI~i~~s~~VWIDH~t~s~~~~e~~~~~~~~~~~~~~~Dg~lDi~~gs~~VTvS~n 240 (399)
T d1bn8a_ 161 DAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYN 240 (399)
T ss_dssp CCCCSSCEEETTSSSSCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGCCEETTEECCCCCCSEEEETTCEEEEEESC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECC
T ss_conf 17466666655666556767778658986686589988660267754444544456653333451653146404995774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~f~~h~k~~L~G~~d~~~~d~g~~~vT~hhN~f~~~~~R~Prvr~g~vHv~NNy~~n~~~~~~~~~~ya~~~~~~a~il~ 320 (399)
T d1bn8a_ 241 YYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYA 320 (399)
T ss_dssp EEEEEEECCEECCCTTCGGGTTCCCEEEESCEEEEEEECSSEESSCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEE
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCEEECCCCCCEEEE
T ss_conf 15687524675678876434687359999327247645686303557888851767787655410002212456746999
Q ss_pred ------------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 EgN~F~~~~~~~~~~~~~~~~g~~~~~~gn~~~g~~~~~~~~~~~~~~~~~~p~y~y~~~~A~~v~~~V~a~AGAGkl~ 399 (399)
T d1bn8a_ 321 QNNVIDVPGLSAAKTISVFSGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN 399 (399)
T ss_dssp ESCEEECTTCCSGGGEEECTTCCBCEEESCEETTEECCHHHHTTCBSCCSCCCCSCCCCCCHHHHHHHHHHHCSTTSCC
T ss_pred EEEEEECCCCCCCCEECCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 8148878888655230102688459607847648453676676746565323456533479999998765258976159
|
| >d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30035.11 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~kltl~d~~l~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvil~SH~GRP~g~~~~~~Sl~~~~~~L~ 80 (398)
T d1vpea_ 1 EKMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLS 80 (398)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98762004847998999931477533995887289999999999999789989998378999998887668799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~l~~~v~f~~d~~~~~~~~~~~~l~~g~i~lLEN~Rf~~~E~~n~~~f~k~La~l~DiyVnDAFg~sHR~haS~~gi~~ 160 (398)
T d1vpea_ 81 ELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQ 160 (398)
T ss_dssp HHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSTHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGGG
T ss_pred HHHCCEEEEEECCCCHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEECHHH
T ss_conf 63164079850368658899861578876897244442432333247799998605560342543566515875011345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~lps~aG~l~ekEi~~L~k~l~~~~~P~~aIlGGaKisdKi~~i~~L~~k~D~iiigG~~antfL~a~G~~iG~sl~e~~ 240 (398)
T d1vpea_ 161 FIPSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEED 240 (398)
T ss_dssp TSCEEECHHHHHHHHHHHHHHHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHHHHHTSCCCTTSCCCGG
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 46101147778789876422101467517996157635079999988875022232423789999974997788753412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~i~~~a~~~~~~i~lP~d~~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGP~G 320 (398)
T d1vpea_ 241 KIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMG 320 (398)
T ss_dssp GHHHHHHHHHHHHHTTCEEECCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCCCCEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCC
T ss_conf 56789999987665288511001012110003566520213124798765321366500899998745576799974612
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~t~~~~~sIiGGGdT~aai~~~g~~~~f~hvSTGGGA~Le~L~G~~LPgi~aL~~~~a 398 (398)
T d1vpea_ 321 VFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASMRIKKA 398 (398)
T ss_dssp CTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHTTCGGGSSEEESCHHHHHHHHTSSCCHHHHTSCBCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHCCC
T ss_conf 011662417999999999987238998999178999999972986796089677899999987999718999863549
|
| >d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=30034.72 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~~~~~~~~~T~avH~G~~~~~~~~~~av~~PI~~sst~~~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LE 80 (398)
T d1qgna_ 1 MKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALE 80 (398)
T ss_dssp -CCCTTCCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH
T ss_conf 98534579976579968976898888899618830777578089899998743776796443998868999999999982
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~t~~v~~E 160 (398)
T d1qgna_ 81 GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTE 160 (398)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECC
T ss_conf 99348896486468888876303455432322221011333210343456643222442210233432103563179705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 spsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~~~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~ 240 (398)
T d1qgna_ 161 SPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL 240 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHHCCCEEEEECHHHCCCCCCEEEHHHCCHHHHHHHHHHH
T ss_conf 74300024321799999886449879961502144557722317989998100015765311100100013343221111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~G~~l~p~~a~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~ 320 (398)
T d1qgna_ 241 HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 320 (398)
T ss_dssp HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
T ss_conf 03677748979999998333477889999889999999999739882005788888993365554325898720466643
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 g~~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~AL~~i 398 (398)
T d1qgna_ 321 GDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 398 (398)
T ss_dssp SCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCCCEEEECCCCCCCEEECCCHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 999999999972885626268788761121750113100899999965989297999761089999999999998429
|
| >d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: NADH-dependent butanol dehydrogenase A (TM0820) species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=30029.75 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~M~~f~f~~p~~i~~G~g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~ 80 (398)
T d1vlja_ 1 HHHMENFVFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSK 80 (398)
T ss_dssp CCCCCCEEECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHH
T ss_pred CCCCCCEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH
T ss_conf 99888728758986998549999999999965998489998974787731999999999865991999867159989899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtgse~t~~avi~~~~ 160 (398)
T d1vlja_ 81 VHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNGNAVITNEK 160 (398)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSSEEEEEETT
T ss_pred HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEECC
T ss_conf 99876411456676688448863112788889886414556776436644367787335414654432113552132001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~K~~~~~~~~~p~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~s~~~a~~~~~~~~~~l~~~~~~~~~ 240 (398)
T d1vlja_ 161 TKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHILEYYFDGSSPEISNEIAEGTIRTIMKMTERLIEKPDD 240 (398)
T ss_dssp TTEEEEEECGGGSCSEEEECGGGGGGSCHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCEEEECCCCCEEEEEEHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 25420232012443169985564077740001131266998866531021256434577899988740233664038987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~ar~~l~~a~~~a~~~~~~~~~~~~~g~~H~l~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~la~~l~~~~~ 320 (398)
T d1vlja_ 241 YEARANLAWSATIALNGTMAVGRRGGEWACHRIEHSLSALYDIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKIFGFEG 320 (398)
T ss_dssp HHHHHHHHHHHHHHTSSTTTTTSCSCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
T ss_conf 99987667789988888876530576402111112113455877022024016789999987574689999999738899
Q ss_pred -----------------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~e~~~~~~~~l~~~~~~lglP~~L~elGi~~~~i~~ia~~a~~~~~~~~npr~~~~~~~~~l~~e~i~~Il~~A~~ 398 (398)
T d1vlja_ 321 EGEELILKGIEAFKNWLKKVGAPVSLKDAGIPEEDIDKIVDNVMLLVEKNLKPKGASLGRIMVLEREDVREILKLAAK 398 (398)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCSTGGGTCCGGGHHHHHHHHHHHHHHTTGGGTCCSCSSSCCCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 819999999999999999859999989939999999999999996766427987676213334899999999999659
|
| >d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Citrobacter freundii [TaxId: 546]
Probab=100.00 E-value=0 Score=29957.69 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~d~k~~~f~T~~ih~G~~~~~~~g~v~pPI~~sST~~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg~~ 80 (397)
T d1y4ia1 1 SDCRTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEA 80 (397)
T ss_dssp CCGGGSCHHHHHHHTTCCCCTTTCCSSCCCCCCSCCCCSSHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99888981100376798888789992188028888650888999876347768966658988789999999999849962
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~~Esp~NP 160 (397)
T d1y4ia1 81 GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANP 160 (397)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTT
T ss_pred CEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 11106778888887763168998654301012331035431367785575414899989999865877738980487522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~ 240 (397)
T d1y4ia1 161 TLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDI 240 (397)
T ss_dssp TCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHT
T ss_pred CEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCEEEEEHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 11003307899886047852870275227154763202897899851351078741465215787889999999999967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~G~~l~p~~a~l~~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~~~ 320 (397)
T d1y4ia1 241 TGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL 320 (397)
T ss_dssp TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETTHH
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
T ss_conf 49858989999997471769999999999999999999748996767488878996522223446778759999956999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGlEd~~DLi~Dl~~AL~~a~~ 397 (397)
T d1y4ia1 321 EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKATF 397 (397)
T ss_dssp HHHHHHHHTCSSSEECSCCSCSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999997289362305637432032276312654589999997598929799976119999999999999987219
|
| >d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29956.64 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~r~ttfGESHG~aig~vIdG~PaG~~id~~~i~~~L~RRrpG~~~~~t~R~E~D~veilSGv~~g~TtG~PI~~~I 80 (397)
T d1q1la_ 1 SLRYLRFLTAGESHGKGLTAILEGIPANLPLSEEEINHELRRRQRGYGRGGRMKIEKDTAEILSGVRFGKTLGSPIALFI 80 (397)
T ss_dssp CCSSCEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHTTCC------CCSCCEEEEESEETTEECSSCEEEEE
T ss_pred CCCEEEEECCCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCEEEEE
T ss_conf 96569996034578984489980508488848999999985689899999866799984799145158980678559999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~N~D~~~~~y~~~~~~~~~~~~~~~~~pRPGHAD~~~~~KYg~~d~r~gggRsSaReTa~rVaAGaIAk~~L~~~gI~v~ 160 (397)
T d1q1la_ 81 RNRDWENWKEKMAIEGEPSPSVVPFTRPRPGHADLSGGIKYNQRDLRNILERASARETAARVAVGAVCKKFLSEFGIKIG 160 (397)
T ss_dssp ECSCC-------------------------------CTTTTTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 87876654543322356205554440488887536778874576666766514788999999999999999998498788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 s~v~~IG~i~~~~~~d~~~~~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~~r~~gDSvGG~ve~~~~gvP~GLGe 240 (397)
T d1q1la_ 161 SFVVSIGQKEVEELKDKSYFANPEKLLSYHEKAEDSELRIPFPEKDEEFKTYIDEVKEKGESLGGVFEVFALNVPPGLGS 240 (397)
T ss_dssp EEEEEETTEECGGGSSGGGGGCHHHHHHHHHHHTTSTTCCSCGGGHHHHHHHHHHHHTTTCCBCEEEEEEEESCCTTCSC
T ss_pred EEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCC
T ss_conf 89999866752434555445780233556887650750357656999999999999856886440699999658887667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 pv~~ddkLda~LA~AlmSIpAvKgvEfG~Gf~~a~~~GSe~nD~~~~~~~~~~~~~tN~aGGilGGISnG~pI~~rva~K 320 (397)
T d1q1la_ 241 HIQWDRRIDGRIAQAMMSIQAIKGVEIGLGFEAARRFGSQVHDEIGWSEGKGYFRHSNNLGGTEGGITNGMPIVVRVAMK 320 (397)
T ss_dssp SSSGGGCHHHHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTCCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 73444442489999875040144301265166776630235565313478873355667764245765886089999978
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 P~sSI~~~q~Tvd~~~~e~~~~~~gRhDpcivpra~~VvEAm~alvlaD~~L~k~g~d~~~~~~~~~~~y~~~~~~~ 397 (397)
T d1q1la_ 321 PIPTLKNPLRSVDIETKEEMKAGKERTDIVAVPAASVVGEAMLAIVLADALLEKLGGDFMEEVKKRFEDYVNHVKSF 397 (397)
T ss_dssp CCCC------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 86446775636237898777502799898578763389999999999999999857984999999999999997529
|
| >d1vkoa1 c.2.1.3 (A:11-314,A:429-521) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Myo-inositol 1-phosphate synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29955.68 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~v~s~~v~y~~~~i~~~y~y~~t~v~~~~~~~~v~p~~~~~~f~t~~~vpklGVmLVG~GGnngTT~~aGv~Anr~g 80 (397)
T d1vkoa1 1 KRLIVESPNVKLEDGVLESRFTYRKNHFEHRADGLHVTPKEHDYSFKTVLKPRKTGLLLVGLGGNNGSTAVGSIFANQYA 80 (397)
T ss_dssp CCCCCCCTTEEEETTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSCCCEEEEEETTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCEEECCCEEEEEEEECCEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 94488399738737558999886104999817935998767778998416688258998438840888999999998758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 L~w~tk~G~~~an~~GSltq~stirlG~~~~~~~~~~~P~kd~lPl~~p~DiVfGGWDI~~~nL~eAa~rA~VLd~~ll~ 160 (397)
T d1vkoa1 81 MTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGWDISDSNLYEAMGRAKVFEPELQE 160 (397)
T ss_dssp CEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGGGEEEEEECSSCCCTTHHHHHHTCSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCHHHHH
T ss_conf 97546677405886351443033575135789873356376517889821168944469999889999875999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~~~L~~i~P~psv~~pdfia~nq~~ra~nv~~g~~k~e~ve~Ir~DIr~Fk~~~~ldrVVVlwtAsTEr~~~~~~~v~ 240 (397)
T d1vkoa1 161 KLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIRKFKQEHELECVIVLWTANTERYTDVRQGLN 240 (397)
T ss_dssp HHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHHHHHHHHTCSEEEEEECSCCCCCCCCCTTTT
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf 99999860865542107277775135200151358889999999999999999974997699998158777777761200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~t~e~l~~ai~~n~~eIsPS~lYA~AAi~eG~pyiNgsPq~t~vPal~eLA~~~~v~iaG~DfKTLLaspliLDl~ll~e 320 (397)
T d1vkoa1 241 ATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSLLASPLIYDLAILTE 320 (397)
T ss_dssp SSHHHHHHHHHTTCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 16999999986699878859999999997599623699755666459999986199665257898755188886999996
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 l~~Ri~~k~~~~~~~~~~Vls~LS~~~KaPl~~~g~~~vn~l~kQr~~l~N~lR~~~Gl~p~~~m~lEy~~~lp~~k 397 (397)
T d1vkoa1 321 LASRVSYKVDDEYKPFHSVLSILSLLLKAPVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQIEFFTQLPAAK 397 (397)
T ss_dssp HHTTEEEESSSSEECCCSBCGGGGGGBSSCCCSTTSCCCCCHHHHHHHHHHHHHHHHTCCCCTTSCGGGTSCCCCCC
T ss_pred HHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
T ss_conf 64178862254004752077776665268888999866028899999999999998299977754303310055579
|
| >d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29951.33 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia 80 (397)
T d3tata_ 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp CCCCCCCCCCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 96557778999488999997268998948850787738889988868999999999717666787898555899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~ 160 (397)
T d3tata_ 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCH
T ss_pred HHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHCCCEEEEEECCHHHCCCCCH
T ss_conf 99852259767767689845760377888988776533799833662667666279999869979997465142256420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i 240 (397)
T d3tata_ 161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL 240 (397)
T ss_dssp HHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCHHHHHHHHCCCCEE
T ss_conf 77899864066552899826899997841788999999999853694699415531001697533114554442277359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d3tata_ 241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRIL 320 (397)
T ss_dssp ECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 98447665333576512110011678999988888887752256666078999999860788889999988889999999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~e~~~~L~~e~~V~l~~g~Ri~~a~~~~~~i~~~~~ai~~v~ 397 (397)
T d3tata_ 321 AMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM 397 (397)
T ss_dssp HHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCCHHHHHHHTTTTCEECCSSSCCBTTSCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999848998648876898417841919999999999599995798879852599889999999999869
|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29949.04 Aligned_cols=1 Identities=0% Similarity=0.669 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~p~GL~N~GNtCY~NSvLQ~L~~~p~f~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~i~p~ 80 (397)
T d1vjva_ 1 QFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSFKSVLPV 80 (397)
T ss_dssp CCCCCCCEECCCSSCHHHHHHHHHHHHSHHHHHHHHTCCGGGCCSCTTSTTHHHHHHHHHHHHHHHHHHHCC-CCEECCH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98789988888884079999999998089999999817741011346654322589999999999999985898714879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~QqDa~Efl~~ll~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (397)
T d1vjva_ 81 VLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQ 160 (397)
T ss_dssp HHHHHHHHHCGGGGCBC----CBCCCCHHHHHHHHHHHHHHHHTHHHHTTTCEEEEEEEEETTEEEEEEEECCCEESCEE
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCCCCCCEECCEEEEEEE
T ss_conf 99999999704322465566634126689999999999987733213554155120058862336644213540211233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~l~i~l~R~~~~~~~~~~~k~~~~~~~~~~ld~~ 240 (397)
T d1vjva_ 161 CHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVA 240 (397)
T ss_dssp ECCCTTCCBHHHHHHHHHEEC---------CCCCEEEEEEEEECBSEEEEEECCEEEETTTTEEEECCCCCBCCSEEECG
T ss_pred EEECCCEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCEEECC
T ss_conf 46326412202778764366540534555787523220423238952377766654214556110327625267077525
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (397)
T d1vjva_ 241 DMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHFPPNLEK 320 (397)
T ss_dssp GGBCHHHHHHHHHHHHHHHHHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCHHCCCHHHHCCCCCCCCCCC
T ss_conf 32110233320015676644331111477777640468766532234200011000023100110001000135632123
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~Y~L~aVv~H~G~~~~~GHY~ay~r~~~~~~~W~~~nD~~V~~v~~~~V~~~~~~~~~~~aYlLfY~r~~~ 397 (397)
T d1vjva_ 321 GENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALILMYKGFGL 397 (397)
T ss_dssp TBCSSSEEEEEEEEEEESSSTTSSEEEEEEECSSCTTCEEEEETTEEEEECHHHHHGGGCCTTSCEEEEEEEEETTC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCHHHHHHHHCCCCCCEEEEEEEEECCC
T ss_conf 67899888999999996599999682899989999898999989877799889998750899888189999996489
|
| >d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Bacterial glucoamylase C-terminal domain-like domain: Bacterial glucoamylase, C-terminal domain species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]
Probab=100.00 E-value=0 Score=29947.06 Aligned_cols=1 Identities=0% Similarity=0.337 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~s~~~lk~~~~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~ 80 (397)
T d1lf6a1 1 NNFNGKANSLYYNSMMILKASEDKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDY 80 (397)
T ss_dssp CCTTTTCCHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 99873799999999999998047789964897677886655689889997057272599999999985997999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~~~~~~G~~~~~~~~~G~~~~~~~q~D~~g~~i~a~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lWEe~~g~~~~t 160 (397)
T d1lf6a1 81 LAKVVKDNGMIPQNTWISGKPYWTGIQLDEQADPIILSYRLKRYDLYDSLVKPLADFIIKIGPKTGQERWEEIGGYSPAT 160 (397)
T ss_dssp HHHHHHHHSSCCSCBCTTSCBCCCCCCHHHHHHHHHHHHHTTCGGGTTTTHHHHHHHHHHHCSSBSSCTTSSCCBBCHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 99995325877887886798645677776699999999999753406899999999999838887655454457864203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~aL~~~a~la~~~g~~~~a~~~~~~A~~i~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T d1lf6a1 161 MAAEVAGLTCAAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYD 240 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 67799999999999886088157999999999999999983428356610243200146666753110001245434456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~lDasll~~~~~g~~~~~d~~~~~tl~~i~~~l~~~~g~~~~~~RY~~D~y~~~~~~~~~~~~~~g~pW~i~T~~~a 320 (397)
T d1lf6a1 241 QKEIVDPSFLELVRLGVKSADDPKILNTLKVVDSTIKVDTPKGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERG 320 (397)
T ss_dssp GGGCCCGGGGHHHHTTSSCTTCHHHHHHHHHHHHHSEEEETTEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 67776778763110378788878999999999987166777666654454555343577677667868754999999999
Q ss_pred ----------------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~g~~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~a~plaWS~A~~i~~~~~l~~~~~~~~~~~~~~~~~~ 397 (397)
T d1lf6a1 321 MYEIAAGKDATPYVKAMEKFANEGGIISEQVWEDTGLPTDSASPLNWAHAEYVILFASNIEHKVLDMPDIVYKRYVA 397 (397)
T ss_dssp HHHHHTTCCCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSSCSSCHHHHHHHHHHHHHHHHTSCTTSCHHHHHHHTC
T ss_pred HHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
T ss_conf 99997117999999999976688886350046989984899954788999999999998649976666788887309
|
| >d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 5-aminolevulinate synthase species: Rhodobacter capsulatus [TaxId: 1061]
Probab=100.00 E-value=0 Score=29879.23 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~l~~l~~~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~ 80 (396)
T d2bwna1 1 DYNLALDKAIQKLHDEGRYRTFIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSG 80 (396)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCCEEEECTTSTTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 96799999999999859986342012246788740474027998289998852102768999999999999999589864
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Sr~~~G~~~~h~~LE~~lA~~~g~e~all~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H 160 (396)
T d2bwna1 81 GTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH 160 (396)
T ss_dssp SBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHHHCCCCCCEEEEC
T ss_conf 55244587449999999999974998515540113778889998760367984310534223000143046667337632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 nd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di 240 (396)
T d2bwna1 161 NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDI 240 (396)
T ss_dssp TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSE
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCHHHCCCCEEEEE
T ss_conf 36877666776405667616999752367644466176899865424066501210110221666662233187312124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~gTlsKa~g~~Gg~v~~~~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~ 320 (396)
T d2bwna1 241 FNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 320 (396)
T ss_dssp EEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 53124655533554353268999998751213453136757778899999997631207899999999999999889866
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------------~ 683 (1019)
+
T Consensus 321 g~~~~~~~spIvpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~iw 396 (396)
T d2bwna1 321 GMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 396 (396)
T ss_dssp TCCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 9986899999799996999999999999999689899987899689997269998576699999999999999859
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29873.17 Aligned_cols=1 Identities=0% Similarity=-1.290 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~ 80 (396)
T d1m7xa3 1 VVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLY 80 (396)
T ss_dssp CCCCHHHHHHHSTTSCCEEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 96641024578889986799772571477899998879999999899999982998899698887899899896867587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (396)
T d1m7xa3 81 APTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFL 160 (396)
T ss_dssp EECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 71824289899999999985420333201143446786555554567863235678778778877754467772358999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 240 (396)
T d1m7xa3 161 VGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGV 240 (396)
T ss_dssp HHHHHHHHHHSCCCEEEECCSHHHHCC--------------CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTTT
T ss_pred HHHHHHHHHHHCCCCEEEECHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 99999889985786323311423122010011111111103566550289999999999863479946997521787532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d1m7xa3 241 SRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQK 320 (396)
T ss_dssp TBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHHHGGGTTTTTSCEEEEECGGGSSTTSCCHHHHSCSSHHHH
T ss_pred CCCCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 22000354320334211022344430000013444422223100111055521222344322457774223688877899
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~la~a~llt~pG~P~IYyGdEiG~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~~L~~lR~~~paL~~~~~~ 396 (396)
T d1m7xa3 321 FANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFD 396 (396)
T ss_dssp HHHHHHHHHHHHHSSSEEEEETTTTTTCSSCCCTTSCCCGGGGCSSCCHHHHHHHHHHHHHHHHTTCGGGTSCTTS
T ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
T ss_conf 9999999999998178547056512487899998887782111476534279999999999999739876460789
|
| >d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29873.76 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~f~~~~~~p~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~ 80 (396)
T d2q7wa1 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp -CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 96445547998599999998466899968830787658889989988999999999618988988997677999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~ 160 (396)
T d2q7wa1 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCC
T ss_conf 99861698666442013213417899999999886315650899816888430599998599067245434456542210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~ 240 (396)
T d2q7wa1 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 57778988515838999568849949336889987788877048819998615354346986674286654562344211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (396)
T d2q7wa1 241 ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 33564434445777442446606899999865556665504445787899999999853913678999999999999999
Q ss_pred ---------------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~~e~~~~L~~e~gV~~~~g~Ri~~a~l~~~~i~~~~~ai~~v~ 396 (396)
T d2q7wa1 321 MRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 9999999999828988741564897179951879999999999689997799879952898788999999999869
|
| >d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Phase 1 flagellin superfamily: Phase 1 flagellin family: Phase 1 flagellin domain: Phase 1 flagellin species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29808.50 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~i~gl~qa~~N~~d~~s~lqtae~al~~~~~iL~r~reLavqaan~t~~~~dr~ai~~E~~~l~~ei~~ia~~T~fng~~ 80 (395)
T d1io1a_ 1 NIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVK 80 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCC
T ss_conf 97138899998999999999999999999999999999999850578999999999999999999999999737028802
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Ll~Gs~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d1io1a_ 81 VLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYADTTIALDNSTFKASATGLGGTDQK 160 (395)
T ss_dssp TTTSCEEEEEECSSSTTCEEEEEECCCSTTTTTCTTCCCCCCCEEEEEECCCCSEEEEEEECBGGGSTTTCGGGCSSEEE
T ss_pred CCCCCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23556725897247875058997123310001121100222322333211122222211013443222112232232100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (395)
T d1io1a_ 161 IDGDLKFDDTTGKYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAAL 240 (395)
T ss_dssp ECSSEEEETTTTEEEEEEEEETCSSCCEEEEEEECTTTCBEEESTTCCSCCTTSSCTTCCEEESEEEEEGGGCHHHHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 01221111101110000011222221000110000133210011222111223444333210001000000120011100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (395)
T d1io1a_ 241 TAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADDGTSKTALNKLGGADGKTEVVSI 320 (395)
T ss_dssp HHTTCCSCEEEEEEEEECTTSCEEEEEEEEEETTEEEEEEECTTSCEEECBCCBBCSSSSCBCCBEEEESTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 00012233222221113421100145532112221001101222332123322222200233102222234341035412
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~v~t~~~A~~Al~~iD~Ai~~v~~~Ra~lGA~qNRle~ti~NL~~~~~N~~aar 395 (395)
T d1io1a_ 321 GGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLAAVQNRFNSAITNLGNTVNNLTSAR 395 (395)
T ss_dssp TTEEEEHHHHTTCBTTTSCCCCCCCCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 551021123455332222102466488899999999999999999998755698868999998999999998519
|
| >d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29802.95 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ld~~g~~~~~~~~~~ls~e~l~~~Yr~M~~~R~~e~~~~~l~~~G~i~~ 80 (395)
T d2bfda1 1 KPQFPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISF 80 (395)
T ss_dssp CCCCTTCCCCCCSSCCCCCCCCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99899987756655455787667888806778999999884236998999999999999999999999999996897012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~GqEA~~vg~~~al~~~D~~~~~yR~h~~~la~G~~~~~~~ael~g~~~g~~~Grggs~H~~~~~~~~~~~~~ivg 160 (395)
T d2bfda1 81 YMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLA 160 (395)
T ss_dssp CCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTT
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 50898869999999997697780134445367244431789999998740035764456654443323346311344334
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~p~A~G~A~a~k~~~~~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~yaist~~~~~~~~~~i~~ra~~ 240 (395)
T d2bfda1 161 TQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPG 240 (395)
T ss_dssp THHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGG
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHC
T ss_conf 55107888888765037654443114788754113889999986237743799986133422200210011168876310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~gi~~~~vDG~Dv~aV~~a~~~A~~~~R~g~gP~lIE~~TyR~~~Hs~~DD~~~YR~~~Ei~~w~k~DdPi~~~~~~Li~ 320 (395)
T d2bfda1 241 YGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLS 320 (395)
T ss_dssp GTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 35541688337389888888876433312687537887663588887767732466889999988549899999999998
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~g~~s~ee~~~i~~e~~~eV~~A~~~A~~~p~P~~~~l~~~VYae~p~~l~eq~~~~~~~~~~~~e~~~~~~~~~ 395 (395)
T d2bfda1 321 QGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHFDK 395 (395)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHHHHHHHHHHHHHHHHHGGGSCGGGBCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCC
T ss_conf 799999999999999999999999999858997989998450159997799999999999996725388455349
|
| >d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: FkbM-like domain: Methyltransferase FkbM species: Methylobacillus flagellatus [TaxId: 405]
Probab=100.00 E-value=0 Score=29798.71 Aligned_cols=1 Identities=0% Similarity=-0.195 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~ 80 (395)
T d2py6a1 1 DPLAMNDSFLAAADALAVDPMFGIPANVREVIARRGNATRLVILGTKGFGAHLMNVRHERPCEVIAAVDDFRYHSGELYY 80 (395)
T ss_dssp CGGGHHHHHHHHHHHHHHCTTTTSCHHHHHHHHHHGGGCEEEEECSSSTHHHHHSCSSSCSSEEEEEECTTTTTSCCEET
T ss_pred CCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCEEC
T ss_conf 94116778887788754472320868899999850897528997686458999999987794699996684232286533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 g~pv~s~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T d2py6a1 81 GLPIISTDRFTELATHDRDLVALNTCRYDGPKRFFDQICRTHGIPHLNFEQAVRAFGLQGNVDYRVDDWGADIVRNIPAF 160 (395)
T ss_dssp TEEEECHHHHHHHHHTCTTEEEEECCCSHHHHHHHHHHHHHTTCCEEEHHHHHHHTTCTTSSCGGGSCCHHHHHHTHHHH
T ss_pred CEEEECHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 55751678864344226857999813641122589999876598400157778873774234402444589999869999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~L~D~~S~~~~~~~l~~rl~~d~~~~~~~~~~~~~~YF~~~i~~l~kn~vfIDVGAniG~~s~~f~~~~~~~~~k 240 (395)
T d2py6a1 161 QTLAQRLADDYSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRSGLLRFSDSEKMVDCGASIGESLAGLIGVTKGKFER 240 (395)
T ss_dssp HHHHHHCSSHHHHHHHHHHHHHHHHCCTHHHHHHCCCGGGTTTSSSSCCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSE
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCE
T ss_conf 99998713776599999999998639989985135758776543404676799899997758778899999966899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 V~aFEP~p~n~~~LkkNi~~n~~~n~~~~I~~~~~alsd~~~~~~f~~~~~~~s~~~~~~~~~~~~~~V~~~tLD~l~~~ 320 (395)
T d2py6a1 241 VWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGENTIRVPFNHEGGHGGFVKPADADHEPADLIDVRPIDDIIDD 320 (395)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSSCEEEEC--------------------CEEEEECHHHHCSS
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCC
T ss_conf 99993987999999999985622255543999998961661389985179865310135667775189998788995378
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~id~IKIDVEG~E~~VLkGa~~~Lk~~kPiI~IEiyh~~~d~~~i~~~L~~l~~~Y~~~lR~h~~~~~d~vlY~~ 395 (395)
T d2py6a1 321 APTFIKMDIEGSELSALKGARRAISEHKPKLAISAYHRSTDLLDLTNYILSIRPDYQIGLRHHTPDRWDTCLYFY 395 (395)
T ss_dssp CCSEEEECCSSCHHHHHHTTHHHHHHHCCEEEEECCSSTTHHHHHHHHHHHHCTTCCEEEEECSSSSCCEEEEEC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEC
T ss_conf 998899968998799999789999867987999995257659999999998636974999668987501489859
|
| >d1w36b2 c.37.1.19 (B:486-880) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V beta chain (RecB), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29797.12 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~g~~~p~~~~w~~~~~~~~~~~~~~~~A~~~A~~I~~ll~~~~~~~~~~~~~~~~r~v~~~DIAILvR~~~~~~ 80 (395)
T d1w36b2 1 ALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAA 80 (395)
T ss_dssp TEEEEETTEEECSEEEEECCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHTTCEEEEETTEEEECCGGGEEEEESSHHHHH
T ss_pred CCEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHH
T ss_conf 95367889768700210389876551309999999999999999971203653004677767788143899983766699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~i~~aL~~~gIP~v~~~~~~~l~~~~ev~~llalL~~l~~p~d~~~l~~~L~sp~~gl~~~~l~~~~~~~~~~~~~~~~~ 160 (395)
T d1w36b2 81 QVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEF 160 (395)
T ss_dssp HHHHHHHTTTCCEEETTCCCBGGGSSHHHHHHHHHHHHTCTTSHHHHHHHHHSGGGTCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999998599859935875432569999999999977455647889998708556999999998751267799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~e~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 240 (395)
T d1w36b2 161 DGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQ 240 (395)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHSSSHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHSCCCCSTTB
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 99999998634258999999875499999863671799999998999999998745778899999999986143231233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~daV~ImTIHkSKGLEfpvVflp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~Ee~RLlYVA 320 (395)
T d1w36b2 241 QMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVA 320 (395)
T ss_dssp CCCCTTGGGSEEEEETTTTSSCCEEEEEETTTTCCCCCCSCEEECTTTCCEEEESSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCEEEEECHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 10110256508997114530677778997167668886556666555532225766465578898899999997454645
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 lTRAk~~L~l~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pw~~ 395 (395)
T d1w36b2 321 LTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQV 395 (395)
T ss_dssp HTTEEEEEEEEECCCCCSCSCCSSCCGGGGSHHHHHHTCSSCCCHHHHHHHHHHSCSTTEEEEECCCCCCCCCCC
T ss_pred HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 734726118997555666788788865778799999707888886779998987457876667789998999879
|
| >d1aora1 a.110.1.1 (A:211-605) Aldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Aldehyde ferredoxin oxidoreductase, C-terminal domains superfamily: Aldehyde ferredoxin oxidoreductase, C-terminal domains family: Aldehyde ferredoxin oxidoreductase, C-terminal domains domain: Aldehyde ferredoxin oxidoreductase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29796.87 Aligned_cols=1 Identities=0% Similarity=-0.958 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 vad~~~f~~~~~~~~~~~~~~p~~~~~l~~~GT~~~~~~~~~~g~lP~~Nf~~g~~~~a~~isge~~~~~~~~r~~~C~~ 80 (395)
T d1aora1 1 IADKQKFMLVVREKVNKLRNDPVAGGGLPKYGTAVLVNIINENGLYPVKNFQTGVYPYAYEQSGEAMAAKYLVRNKPCYA 80 (395)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSHHHHTHHHHHCGGGHHHHHHHTTCCCBTTTTBSCCTTGGGGSHHHHHHHTEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCHHCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCC
T ss_conf 98989999999999999982970415321109299999998769877488888889971542899999986146999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Cpi~C~~~~~~~~~~~~~gpEYEt~~a~Gs~~Gi~d~~~v~~~n~l~d~~GlDtIs~G~~ia~amE~~e~Gll~~e~~gd 160 (395)
T d1aora1 81 CPIGCGRVNRLPTVGETEGPEYESVWALGANLGINDLASIIEANHMCDELGLDTISTGGTLATAMELYEKGHIKDEELGD 160 (395)
T ss_dssp CSSCCEEEEEETTTEEEECCCHHHHHHHTGGGTCCCHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHTTSSCHHHHTT
T ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCC
T ss_conf 98674834770688753687730110300124899999999999999996813887868999999999779887242066
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~l~wGd~e~~~~li~~IA~r~g~G~~LA~G~~~aae~~G~~~~a~~vkg~e~p~~dpr~~~g~~l~yat~~~G~~H~~ 240 (395)
T d1aora1 161 APPFRWGNTEVLHYYIEKIAKREGFGDKLAEGSYRLAESYGHPELSMTVKKLELPAYDPRGAEGHGLGYATNNRGGCHIK 240 (395)
T ss_dssp SCCCCTTCTHHHHHHHHHHHTTCTTHHHHTTCHHHHHHHTTCGGGCCEETTEECCSCCGGGCHHHHHHHHHCTTSSCSGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHEEECCCCCCHHHH
T ss_conf 77879999999999999998467417888223999999959823546744777443377653132311001577640233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~e~~g~~~~~dp~~~~e~k~~~~~~~q~~~~~~dslg~C~F~~~~~~~~~~~~~~~avTG~~~t~e~l~~~geRi 320 (395)
T d1aora1 241 NYMISPEILGYPYKMDPHDVSDDKIKMLILFQDLTALIDSAGLCLFTTFGLGADDYRDLLNAALGWDFTTEDYLKIGERI 320 (395)
T ss_dssp GCTHHHHTTCSSSCCCTTCCSHHHHHHHHHHHHHHHHHHHHTCCGGGGTTCCHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 22244754389765785514379999999999999996013434413667999999999997538899999999999999
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~l~R~fN~r~G~~~~~dD~lP~r~~~ep~~~G~~kg~~~~~e~~l~~YY~~rGWd~~G~Pt~e~L~~LgL~d~~ 395 (395)
T d1aora1 321 WNAERLFNLKAGLDPARDDTLPKRFLEEPMPEGPNKGHTVRLKEMLPRYYKLRGWTEDGKIPKEKLEELGIAEFY 395 (395)
T ss_dssp HHHHHHHHHHHTCCHHHHSCCCHHHHHSCCCSSTTTTCCCCHHHHHHHHHHHHTCCTTSCCCHHHHHHHTCGGGC
T ss_pred HHHHHHHHHHCCCCHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 999999999747983654569887724888878777876789999999999839898898799999976891339
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=0 Score=29796.25 Aligned_cols=1 Identities=0% Similarity=0.172 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllR 80 (395)
T d1nw1a_ 1 GMKELLSTMDLDTDANTIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLR 80 (395)
T ss_dssp CHHHHHTTCCTTCCGGGCHHHHHHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEE
T ss_pred CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
T ss_conf 94445045654566543615899999999986711026899301699991785334348999688775445789817999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~g~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~~~~~ 160 (395)
T d1nw1a_ 81 VYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEP 160 (395)
T ss_dssp EECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETTEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSS
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 65996116589999999999975799980899818956999734554883331465555999999999850332236675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~~~~~~~~ 240 (395)
T d1nw1a_ 161 DYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNI 240 (395)
T ss_dssp CHHHHHHHHHHHHHHHHSCTTCCEECCGGGSCCEECHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCC
T ss_conf 42888999999765431237776434555302444499999999999987430369846885578856376536433222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~~n~~~fDian~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~ 320 (395)
T d1nw1a_ 241 RMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFL 320 (395)
T ss_dssp ------------------------CCEECCCTTCEEEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34553100023444322356888827998542367885066599999997055677666532134234939999999999
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~~~s~l~W~lW~~iq~~~~~~~fDy~~Y~~~Rl~~y~~~k~~l~~~~ 395 (395)
T d1nw1a_ 321 NYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNLA 395 (395)
T ss_dssp HHHHHHTCSCGGGHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHTHHHHHTTC
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999873666510679999999999999998857899999999646448998999999999999999999887119
|
| >d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative alanine aminotransferase species: Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29795.15 Aligned_cols=1 Identities=100% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~s~r~~~~~~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia 80 (395)
T d1xi9a_ 1 SIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIV 80 (395)
T ss_dssp CCCCCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHH
T ss_pred CCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 96300040357478999999999999779970899899999789999799999999999638898899978999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~ 160 (395)
T d1xi9a_ 81 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 160 (395)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
T ss_conf 86432045231212232322220132100121047999899838833331000320597799984332235431278899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 240 (395)
T d1xi9a_ 161 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYF 240 (395)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTC
T ss_pred HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCHHCC
T ss_conf 76402650899669989754101179999998555425855774121000132222345032078888899958622142
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 320 (395)
T d1xi9a_ 241 ATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 320 (395)
T ss_dssp CGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred CCHHHCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 54010076685187999999999988864378784799999999986087999999999999999999999986799411
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal~rl~~~l~er 395 (395)
T d1xi9a_ 321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER 395 (395)
T ss_dssp CCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 589855898178888899999999999999699999847332889979799996489999999999999999549
|
| >d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp121 monooxygenase (P450 Mt2) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=29793.62 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~LR~~~Pv~~~~~~~g~~~wvvt~~~dv~~vl~d~~~~~~~~~~~~~~~~~~~~~~~~ 80 (395)
T d1n40a_ 1 TATVLLEVPFSARGDRIPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPE 80 (395)
T ss_dssp -CCCCCBSCCCCCSSSCCHHHHHHHHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGG
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99877789988777677399999995299789874899769997799999999769774768776677654444447817
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~d~~~H~~~R~~~~~~Fsp~~~~~~~~i~~~~~~ll~~l~~~g~~~Dlv~~~a~~l~~~vi~~llG~p~~d~~~~~ 160 (395)
T d1n40a_ 81 VVNNMGNIADAGLRKAVMKAITPKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLF 160 (395)
T ss_dssp GGGHHHHHHHTTCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76537871579999999987309999988789999999862033356664418888777655457777522345677777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~ 240 (395)
T d1n40a_ 161 RSLSIAFMSSADPIPAAKINWDRDIEYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSF 240 (395)
T ss_dssp HTHHHHTBCCSSCCHHHHHHHHHHHHHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
T ss_conf 65433333200136999999999999878899875103677777666430566665540035678999875200012335
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~~~l~~L~~~P~~~~~l~~e~~~~~~~i~E~lRl~~p~~~~~~R~a~~d~~i~G~~ip~G~~V~~~~~~a~rDp~~f~d 320 (395)
T d1n40a_ 241 LTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPN 320 (395)
T ss_dssp HHHHHHHHHTCHHHHHHHHHCGGGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSS
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 67888877629630001110123433323320134554543212210232112234565542022201212456200898
Q ss_pred --------------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 P~~F~p~R~~~~~~l~FG~G~h~C~G~~lA~~e~~~~l~~ll~r~p~~~l~~~~~~~~~~~~~~~r~~~~LpV~~ 395 (395)
T d1n40a_ 321 PGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395 (395)
T ss_dssp TTSCCTTCSSTTCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCEEEEEEC
T ss_conf 021387899998877779988369149999999999999999967997888885667461686333871216569
|
| >d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Trichomonas vaginalis, MGL1 [TaxId: 5722]
Probab=100.00 E-value=0 Score=29727.49 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~T~~vh~g~~~d~~gav~~PI~~sst~~~~~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~~~a~~~ 80 (394)
T d1e5ea_ 1 ERMTPATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVAT 80 (394)
T ss_dssp CCCCHHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHEECCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99997899646889989999830880488886518889998751688678534598887899999999998298502234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~d~~~~~~~i~~~t~lv~~Etp~NP~l~v 160 (394)
T d1e5ea_ 81 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKI 160 (394)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEE
T ss_conf 36228889998740233443344541320036767777630543542147899999997516456589994257763122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~ 240 (394)
T d1e5ea_ 161 IDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGS 240 (394)
T ss_dssp CCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCC
T ss_pred EHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 12444420132456708873376547645784011798899612342078743233334431468999999999973277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~lsp~~a~ll~rgl~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~~~~~a 320 (394)
T d1e5ea_ 241 VISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGA 320 (394)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHH
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCHHHH
T ss_conf 78867799999601068899999988899999997652884577577756632155530344667872454026989999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAl~~l~~ 394 (394)
T d1e5ea_ 321 KKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDALLR 394 (394)
T ss_dssp HHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998088061535668766035785102521189999996698939799976218999999999999999639
|
| >d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29727.42 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 M~~ktl~d~d~~~K~VlvR~D~NvPi~~g~I~d~~RI~~~~pTI~~ll~~~akvvl~SH~GRPkgk~~~~~Sl~~~~~~L 80 (394)
T d1phpa_ 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRL 80 (394)
T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99785111376799999994058776099389758999999999999978998999858889999888655569999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~l~~~v~f~~~~~~~~~~~~i~~l~~g~i~lLEN~Rf~~~E~~nd~~fak~La~l~DiyVNDAF~~aHR~haS~~gi~ 160 (394)
T d1phpa_ 81 GELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIA 160 (394)
T ss_dssp HHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHTCHHHHHHHHTTCSEEEECCGGGTTSCCTTTTGGG
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCHH
T ss_conf 87406241113443567899999605789788635445354432153889974254488999665136551477511000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~lps~aG~l~ekEi~~L~~~l~~p~rP~~aIiGGaKisdKi~~i~~l~~k~D~i~igG~mantfl~a~G~~iG~sl~e~ 240 (394)
T d1phpa_ 161 HYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEE 240 (394)
T ss_dssp GTSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHHHHTTCCCTTSCCCG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 02662001108999999999973899976999706763327999987875357278742287999998599667324331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~a~~i~~~~~~~~~~i~lP~D~v~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmG 320 (394)
T d1phpa_ 241 DKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMG 320 (394)
T ss_dssp GGHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTSCEEEEEGGGCCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCEE
T ss_conf 14778999998776429865588630432123455662477701214786003567248999999986530589955523
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~fE~~~F~~GT~~l~~~ia~~~~a~sivGGGdT~aai~~~g~~~~~shvSTGGGA~Le~L~G~~LPgi~aL~~k 394 (394)
T d1phpa_ 321 VFEMDAFAHGTKAIAEALAEALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQLPGVVALEDK 394 (394)
T ss_dssp CTTSGGGCHHHHHHHHHHHHCTTCEEEECSHHHHHHHHHTTCGGGSSEECSCTHHHHHHHTTCCCHHHHTSCBC
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHCC
T ss_conf 56346241899999999996589869995779999999749867885796678999999879997358785169
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29723.78 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~p~~~~~~~~pf~i~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln 80 (394)
T d1qo7a_ 1 KAFAKFPSSASISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLN 80 (394)
T ss_dssp CTTCCCCTTCCSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99788999897787364635899999999999984478997445677753459889999999998634389899999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~ 160 (394)
T d1qo7a_ 81 SFPQFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDK 160 (394)
T ss_dssp TSCEEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSS
T ss_pred CCCCEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 68975999879888999972258998779993665411899999887641135776550444345424347889998777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d1qo7a_ 161 DFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARME 240 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 65788999999998764047624899840765178999887512521015764034322344321000135677888777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~ 320 (394)
T d1qo7a_ 241 KFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTAS 320 (394)
T ss_dssp HHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 77775555555430125555432024520046677787642244568879999999987500132056799999842235
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v~ 394 (394)
T d1qo7a_ 321 APNGATMLQKELYIHKPFGFSFFPKDLCPVPRSWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVW 394 (394)
T ss_dssp ------CTTTTTCEEEEEEEEECTBSSSCCCHHHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHC
T ss_conf 66222321237840687589980888532589999864684699985994781478699999999999999759
|
| >d1u1ha1 c.1.22.2 (A:2-395) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29723.10 Aligned_cols=1 Identities=0% Similarity=-0.361 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~lG~PRig~~RELK~A~E~yw~G~is~~eL~~~~~~~~~~~~~~Q~~aGid~I~~GeFs~yD~vLD~~~~~g~iP~R 80 (394)
T d1u1ha1 1 ASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPR 80 (394)
T ss_dssp CBBCSCCCCSCTTCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTTCSBCEESCCCSSCHHHHHHHHTTCCCGG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 98767589889761899999999779999999999999999999999998599961559840258899999981996534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 f~~~~~~~~ld~yFa~arg~~~~~a~emtkwfdtnyhy~vPe~~~~~~~~l~~~~~~~~~~ea~~~g~~~Kpvl~GP~T~ 160 (394)
T d1u1ha1 81 YGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSY 160 (394)
T ss_dssp GCCCSSSCCHHHHHHHHHCBTTBCCCCEEECTTSSCEEECCEECTTCCCCCCCCHHHHHHHHHHHTTCCCEEEEECHHHH
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 44445666288887887258764444554345789774577407886345540168999998763487646245778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~l~k~~~~~~~~~~~~~ll~~L~~aY~~~l~~L~~aG~~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~i~l~ 240 (394)
T d1u1ha1 161 LLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVE 240 (394)
T ss_dssp HHTCEECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHHHHHHHHHHHHHHTTTTTTSEEEEE
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 97753247876544799999999999999999987665988986062021369999999999999999864489974378
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 tyfg~~~~~~~~~l~~~~~Vd~l~lD~~~~~~~l~~~~~~~p~~k~L~~GVVdgrniw~ed~e~v~~~i~~~~~~v~~er 320 (394)
T d1u1ha1 241 TYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDK 320 (394)
T ss_dssp CCSSCCCHHHHHHHTTCTTCCEEEEETTTCTTHHHHHHHCCCTTCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHSCSSC
T ss_pred ECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 60488763568888636798735788523851148898758755689754681478886999999999999997379200
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 l~lspsCsLlh~P~~~~~e~~l~~~~~~~lafa~~k~~e~~~l~~~~~~~~~~~~~~~~~~~~~~r~~s~~~~n 394 (394)
T d1u1ha1 321 LVVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAGQKDEALFSANAAALASRRSSPRVTN 394 (394)
T ss_dssp EEEEESSCGGGSCSCGGGCCSSCHHHHHTBCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHCTTTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99938998767787174335799889845151999999999999997288308999999999998843887789
|
| >d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=29722.49 Aligned_cols=1 Identities=100% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~ 80 (394)
T d2ay1a_ 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp CGGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 98778878998399999997178998978851787658889989888999999998508878988997778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 160 (394)
T d2ay1a_ 81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK 160 (394)
T ss_dssp HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred HHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCHHCCCCCCHHHH
T ss_conf 97365654346420003572688889988765428844999832321011899998599799941430101442202688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 240 (394)
T d2ay1a_ 161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS 240 (394)
T ss_dssp HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 88764136868999479999899989999999999875304289987525122211666664045544443245443345
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~ 320 (394)
T d2ay1a_ 241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLRE 320 (394)
T ss_dssp CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55666677654201030426899999865366765202423224788889887227888999999999999999999999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls~~~~~~L~~~~~V~~~~g~Ri~~a~l~~~~i~~l~~ai~~v~~ 394 (394)
T d2ay1a_ 321 QLAGELRDLSGSDRFGFVAEHRGMFSRLGATPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAIIEVGV 394 (394)
T ss_dssp HHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCTTCEEEGGGCCTTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99999998489886036779961698519399999999996898956987899537998889999999998279
|
| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29724.55 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~s~e~i~~l~KRRgFv~pS~EIYGGlaG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kASGHv 80 (394)
T d1atia2 1 AASSLDELVALCKRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHE 80 (394)
T ss_dssp CCCCHHHHHHHHHHTTSEEETTGGGTCCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHH
T ss_pred CCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCC
T ss_conf 93209999999984577415712226710155768427999999999999987540477777513344898886206787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~F~D~mv~c~~~~~~~RaD~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~g~~~~~t 160 (394)
T d1atia2 81 ATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWT 160 (394)
T ss_dssp HHCEEEEEEC--------------------------------------------------------------------CC
T ss_pred CCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 88764420267777532022677665565543321134555666889999875476866525876178899889867767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~FNLMF~T~iGp~~~~~~~~yLRPETAQGiFvnF~~~l~~~r~KlPFGiAQIGk~FRNEIsPr~~l~R~REF~q~Ei 240 (394)
T d1atia2 161 PPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEI 240 (394)
T ss_dssp CCEEEECBEEEECSSCCCGGGEEEECSSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEE
T ss_pred CCCHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 50022100012323345656336777013069999799999971567880112432211466376557756332212026
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 E~Fv~P~~~~~~~~yw~~~~~~f~~~lGi~~~~lrfrqh~~~ElAHYa~~~~DiE~~fp~Gw~El~GiA~RtdyDL~~H~ 320 (394)
T d1atia2 241 EYFVRPGEDEYWHRYWVEERLKWWQEMGLSRENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHT 320 (394)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHHTTCCGGGEEEEECCTTTSCTTCSEEEEEEEEETTEEEEEEEEEECTTHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCEEEEEEECCCCCEECHHHHCCCHHHHHHHH
T ss_conf 89981785157788899999999998368833336775052355540545278999669985840413143121478776
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 k~~~~~~~~~~~~~~~~s~~~l~~~d~~~~~~~iPhVIEPS~GldR~~la~L~~ay~eee~~~~e~R~vLkl~P 394 (394)
T d1atia2 321 KDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKP 394 (394)
T ss_dssp SSTTTTTCCSCCCCCSCCCSCCCEECSSSCCEECCEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCG
T ss_pred HHCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 42033202344312777663467880678907850178758882189999999876434227997259983599
|
| >d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystalysin species: Treponema denticola [TaxId: 158]
Probab=100.00 E-value=0 Score=29719.72 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~f~~~~~r~~~~s~k~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~g~~~Lr~aia~~~~ 80 (394)
T d1c7na_ 1 MIYDFTTKISRKNLGSLKWDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMK 80 (394)
T ss_dssp CCCCSCCCCCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97678977677999878899999876754997688327997999889999999999857886899987999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~g~~~~~~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~ 160 (394)
T d1c7na_ 81 DRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLS 160 (394)
T ss_dssp HHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 85599888750476334212343321034444332333467662046677654300222222245655540255666553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (394)
T d1c7na_ 161 KDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF 240 (394)
T ss_dssp TCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH
T ss_pred CCCCCEEEEECCCCCCCCEECCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCC
T ss_conf 04563299945523565412569995343203454320586145532124588666410111002311103234542001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~G~R~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 320 (394)
T d1c7na_ 241 NIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320 (394)
T ss_dssp TCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEC
T ss_conf 22222322223567033445555543003443222221024554200144301311121012321000121256530422
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~p~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~Lk 394 (394)
T d1c7na_ 321 LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLK 394 (394)
T ss_dssp CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 78950489897888899999999999986999997423418899987999995899999999999999999639
|
| >d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: p450 monoxygenase OxyB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29719.01 Aligned_cols=1 Identities=0% Similarity=-0.692 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~p~~~~~~~~dp~~~lr~~~p~~~~~~~~~~~~~~~w~vt~~~dv~~Vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~ 80 (394)
T d1lfka_ 1 DPRPLHIRRQGLDPADELLAAGALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPREL 80 (394)
T ss_dssp CCSCGGGCEETTEECHHHHTSCSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CC
T ss_pred CCCCHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98961104235995799997499058978888888668996799999999759864547765565444565433340432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~ll~~Dg~~H~~~R~~l~~~fs~~~v~~~~~~i~~~~~~ll~~l~~~g~~~Dl~~~~~~~~~~~~~~~~~g~~~~~~~ 160 (394)
T d1lfka_ 81 VGNLMDYDPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRD 160 (394)
T ss_dssp TTCGGGCCTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHH
T ss_pred CCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHH
T ss_conf 34133048756899998854331999999998899999999986520268763025676541111021100475301389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~r~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~ag~~tt~~~ 240 (394)
T d1lfka_ 161 MFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGM 240 (394)
T ss_dssp HHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998862233210037999999999999999999864002210000001013678989999999999998643205889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~e~~r~~~~~~~~~~r~~~~d~~~~g~~ip~G~~V~~~~~~~~rdp~~~~d 320 (394)
T d1lfka_ 241 IGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPD 320 (394)
T ss_dssp HHHHHHHHHHSGGGGGGGSSCHHHHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTT
T ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEECCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999875222045543101223332110000000023321012113567121483542687401232334679212667
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 P~~F~PeR~~~~~lpFG~G~r~C~G~~lA~~e~~~~l~~Ll~~f~~~~l~~p~~~~~~~~~~~~~g~~~lpv~~ 394 (394)
T d1lfka_ 321 VDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW 394 (394)
T ss_dssp TTSCCTTSCCCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCCCEEEEEEC
T ss_conf 33218899999988878987578069999999999999999967988778886766030687777870005359
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=0 Score=29718.09 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~rGvNlGgwlv~E~w~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~ 80 (394)
T d2pb1a1 1 AWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNL 80 (394)
T ss_dssp CCCTTTCCEEEEECTTSSSCCTTTCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 97888977898864334305765583344313677765443201888998739687999999998604889999999977
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~~~~~~~~~~~~~~~~ 160 (394)
T d2pb1a1 81 GLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLN 160 (394)
T ss_dssp TCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSTTHHHHHHH
T ss_pred CCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99889998027884488877552368999999999999799189998511588666767767667644366779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T d2pb1a1 161 VLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQW 240 (394)
T ss_dssp HHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCC
T ss_pred HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCCC
T ss_conf 99999999715887770688741356786654378999999999999997389976998488755344444315788886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~vv~d~H~Y~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~ 320 (394)
T d2pb1a1 241 NVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSC 320 (394)
T ss_dssp SEEEEEECCSCSSHHHHTCCHHHHHHHHHHHHHHHHTCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCS
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 27985311434678655689888787663034555315676120201023005666623655342214654787655646
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~d~~~~~~~~~~~~r~~~~aQ~~~~e~~~GW~fWt~K~~~~~~W~~~~~~~~G~iP~~~~~~~~~~~c~~~ 394 (394)
T d2pb1a1 321 QPLLDISQWSDEHKTDTRRYIEAQLDAFEYTGGWVFWSWKTENAPEWSFQTLTYNGLFPQPVTDRQFPNQCGFH 394 (394)
T ss_dssp GGGSSGGGCCHHHHHHHHHHHHHHHHHHHTTTEEEESCSCCSSCGGGCHHHHHHTTCSCSSTTCCSSTTSSCCC
T ss_pred CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCC
T ss_conf 66567101678899999999999999985279678963016999988889998788969991323688888999
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=100.00 E-value=0 Score=29714.05 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~q~f~w~~~~~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~d 80 (394)
T d2d3na2 1 TNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQ 80 (394)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98627887742657889719999998999997199989979570178878889786667554434446776888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 f~~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T d2d3na2 81 LQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDG 160 (394)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999987998999971266567664310012235765433334564443444345676556778765444445787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~giDGfR~D~a~~~~~~ 240 (394)
T d2d3na2 161 VDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYS 240 (394)
T ss_dssp ESCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHH
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf 65556668888754006888765666652323420267762155888998788876565420567314774224437767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~df~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 320 (394)
T d2d3na2 241 FTRDWINHVRSATGKNMFAVAEFWKNDLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQRHPSH 320 (394)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCGGG
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 89999999987408740210212366632120010033442111037899999999840760539998721511069868
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~v~fl~NHD~~r~~~~~~~~~~~~~~la~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~r~~~~~l~~~r~~~~~ 394 (394)
T d2d3na2 321 AVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPSVFYGDYYGIPTHGVPAMRSKIDPILEARQKYAY 394 (394)
T ss_dssp EEECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 05767288686524455673199999999999984999679972672098998895548999999999998479
|
| >d1q8ia2 e.8.1.1 (A:390-783) Family B DNA polymerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: Family B DNA polymerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29716.19 Aligned_cols=1 Identities=0% Similarity=0.337 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~y~Gg~V~~p~~G~~~~v~~lDf~SLYPsii~~~Ni~p~t~v~~~~~~~~~~~~~~~~~~~~~~~~g~lp~~ 80 (394)
T d1q8ia2 1 NLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIVRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEI 80 (394)
T ss_dssp CTTCSCCCCCCCCCCBCCCCEEEEEEEEEEETTHHHHHHHHHCCCHHHHHHHHHSCSTTTEEECSTTCEEESSSCSHHHH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHH
T ss_conf 99888998899837837999757885588831127999999679965437877678876555786543332001178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~l~~~R~~~K~~~~d~~Q~a~Ki~~NS~YG~~g~~~~~~~~~~~A~~iT~~Gr~~i~~~~~~~e~~g~~ViygDTDSi 160 (394)
T d1q8ia2 81 VTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDST 160 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSEE
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999742100002321024789871221206002455521136788889888589999988631223466650356418
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~E~~~~~~~~~~kk~~~~~~kkrY~g~~~~~~~~~~ 240 (394)
T d1q8ia2 161 FVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRM 240 (394)
T ss_dssp EEECSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCEEEEEEEEEEEECCCCTTCTTCCSCEEEEEEETTEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHEEEEHHHHHHHHHHHHHHHCCEEECCCCEE
T ss_conf 99947971245677889999998877656676665113432002553200000022112113234433000011233247
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~KG~e~vRrd~~~~~k~~~~~vl~~i~~~~~~~e~vk~~~~~l~~~~i~~~~i~~~~l~k~~~~y~~~~~~hV~~a~~~ 320 (394)
T d1q8ia2 241 VFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLA 320 (394)
T ss_dssp EEESSCC--CCCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTGGGGCC-------------------------
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 88750014666662677898989999963626888899999987605877045044543156000356787699999999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~~~~~~~~~~g~~i~Yv~~~~~~~~~~~~~~~iD~~yYi~~qi~~~~~ril~~~~~~~~~~~~~~~~LF 394 (394)
T d1q8ia2 321 DEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF 394 (394)
T ss_dssp -----------------------------------CCCCHHHHHHHTHHHHHHTTGGGGTCCHHHHHHHHHCC-
T ss_pred HHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
T ss_conf 98766327988899898679999899986577548998789999974089999998762788999974686889
|
| >d1ldja2 a.118.17.1 (A:17-410) Cullin homolog 1, Cul-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Cullin repeat-like family: Cullin repeat domain: Cullin homolog 1, Cul-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29722.08 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~d~~W~~L~~ai~~I~~~~~~~~~~~~~lY~~vy~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~LY~~l~~~l 80 (394)
T d1ldja2 1 LDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPSKSKKGQTPGGAQFVGLELYKRLKEFL 80 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTCCC----------------------------TTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96349999999999986699997999999999999994487432000111101121000121025457999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~l~~i~~~~~~~~~~~~L~~~~~~W~~~~~~~~~l~~if~YLdr~yv~~~~~~~~~~~~~I~~~~l~~fr~~v~~~~~ 160 (394)
T d1ldja2 81 KNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLN 160 (394)
T ss_dssp HHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSSCCC-------CCHHHHHHHTTHHHHTTTTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999877437879999999999999999999999999886689988604445666541999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~l~~~il~~I~~~R~g~~i~~~li~~~i~~l~~l~~~~~~~~~~~~~~~~Y~~~FE~~~L~~t~~~Y~~~~~~~l~~~~ 240 (394)
T d1ldja2 161 KQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNP 240 (394)
T ss_dssp THHHHHHHHHHTTTSCCTTCCTHHHHHHHHHHHHTSCCSSSSSCSSCCCHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998678966699999999999994832323330132278878998999999999999999999998498
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~eYl~~v~~~l~eE~~r~~~yl~~~t~~~l~~~l~~~LI~~~~~~l~~~~~~ll~~~~~~~L~~lY~L~~rv~~~~~~l 320 (394)
T d1ldja2 241 VTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGEL 320 (394)
T ss_dssp TTSSHHHHHHHHHHHHHTTTTTTCSSSSHHHHHHHHHHHSSSSSHHHHHHHHHHHHSCCTTHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 35899999999999999999746864699999999999999999999999999987165889999999986553518999
Q ss_pred -------------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~I~~~G~~~i~~~~~~~~~~~~~~V~~ll~l~~~~~~ii~~~F~~d~~f~~~l~~af~~fiN~n~~~~ 394 (394)
T d1ldja2 321 KKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTK 394 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999997233114578689999999999999999999859988999999999999837666689
|
| >d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-lyase (CYS3) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29646.05 Aligned_cols=1 Identities=0% Similarity=-0.228 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 t~~~~~~f~T~~vHag~~~d~~gav~pPI~~ssTf~~~~~~~~~~~y~YsR~gnPT~~~lE~~la~LE~~~~a~~~sSGm 80 (393)
T d1n8pa_ 1 TLQESDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGS 80 (393)
T ss_dssp CCCSSCCHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHH
T ss_pred CCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 99878981042077898899898826882788765138864535773353899868999999999971995488834701
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 aAi~~~l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~i 160 (393)
T d1n8pa_ 81 ATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKV 160 (393)
T ss_dssp HHHHHHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHH
T ss_pred HHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCEEEECCCCHHHHHCCCHHHH
T ss_conf 67776653035798344322001340344454541255225885135689999851201346723763234320203555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p 240 (393)
T d1n8pa_ 161 ADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSP 240 (393)
T ss_dssp HHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCH
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCH
T ss_conf 54444201467845998567447044770541898999816644579886026301102166999999998643888986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~a~ll~rgl~Tl~lR~~~~~~nA~~lA~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~~~~~~ 320 (393)
T d1n8pa_ 241 FDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAAS 320 (393)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88999982775034679999998888999997336727997302334543200222103457877148999959999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGlE~~~DLi~Dl~~AL~~a~~ 393 (393)
T d1n8pa_ 321 KFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQATN 393 (393)
T ss_dssp HHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEECCCCCCCCCEEECCHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 9997188443561677757147376022542289999996598949799986528999999999999999649
|
| >d1xlma_ c.1.15.3 (A:) D-xylose isomerase {Arthrobacter, strain b3728 [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Arthrobacter, strain b3728 [TaxId: 1663]
Probab=100.00 E-value=0 Score=29644.01 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~p~~~~~f~~~~Wt~~~~g~dpFG~~t~~~~d~~~~~~~~~~lG~~~~~fHd~D~~p~~~~~~e~~~~~~~~k~~l~~~ 80 (393)
T d1xlma_ 1 VQPTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDT 80 (393)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99984456417886146678899898878899999999999981998880352334888998788999999999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Gl~l~~~t~nlf~~p~~~~Ga~tnPD~~VR~~Ai~~~k~~idia~~LGa~~~v~W~G~~G~~~~~~~d~~~~~~~l~e~l 160 (393)
T d1xlma_ 81 GLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGV 160 (393)
T ss_dssp TCEEEEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCSSSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98110223664334355437756959999999999999999999996898499736888677777658999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~v~~~a~~~g~~~~~~IEpKP~EP~~~~~~~~~~~~l~fl~~~~~~~~~gvnlD~gH~~lag~~~~~~va~a~~~gkLg 240 (393)
T d1xlma_ 161 DTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLF 240 (393)
T ss_dssp HHHHHHHHHHTCSCEEEECCCSCSSSSEESSCSHHHHHHHHTTCTTGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCE
T ss_conf 99999898629885698611677775554037599999999980894204575204524441577078898998669730
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~vh~Nd~~~~~~D~Dl~~gs~~~~~~~~~~~~l~~g~~~g~~~y~G~~~fD~~~~r~~~~e~~~~~~~~~~~~~~~l~~~ 320 (393)
T d1xlma_ 241 HIDLNGQRGIKYEQELVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMYLLLKER 320 (393)
T ss_dssp CCEECBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHCCTTCCCCCCSCEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 24426787666666677885469999999999953664678787775588722667887306999999999999999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 A~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~e~L~q~~~~~l~g~~ 393 (393)
T d1xlma_ 321 ALAFRADPEVQEAMKTSGVFELGETTLNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHLLGSR 393 (393)
T ss_dssp HHHHHHCHHHHHHHHHHTTTGGGSCSSCTTCCHHHHHTCGGGTTTCCHHHHTTCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9997519999999986565021045543899889999788753699845552232689999999999970489
|
| >d1g8ma2 c.97.1.4 (A:201-593) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Cytidine deaminase-like superfamily: Cytidine deaminase-like family: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC domain: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29643.25 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 g~~~~~LRYGENPHQ~aA~~~~~~~~~~~~~l~gk~SyNN~lD~daA~~lv~ef~~~~~~Pa~vIiKH~NPCGvAi~~~~ 80 (393)
T d1g8ma2 1 GVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPL 80 (393)
T ss_dssp TTTEEEESCSSSTTSCCEEEECSSSSCSEEEEESCCCHHHHHHHHHHHHHHHHHHHHHCSCEEEEEETTEEEEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCC
T ss_conf 99879887976805411386216874316886687027679889999999997465059976999768883366508551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~e~~~~~~~~~~~~~~~~~l~~Ay~~A~~~DP~SAFGGIIa~N~~vd~~~A~~i~~~F~EvIIAP~f~~eAleiL~~KKN 160 (393)
T d1g8ma2 81 SEEEAQVCMVHDLHKTLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 160 (393)
T ss_dssp CHHHHHHTTCTTTGGGCCHHHHHHHHHHHSCTTTTTTEEEEESSCBCHHHHHHHHTSCEEEEEESCBCHHHHHHHHHGGG
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCEEEEECCCCCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHCCC
T ss_conf 02332000012211346629999999871485100050788615533210243222020100113455677888742545
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 lRll~~~~~~~~~~~~~~~r~i~gg~L~Q~~d~~~~~~~~~~~v~~~~~~pt~~e~~dL~FAwkVvK~vKSNAIvlak~~ 240 (393)
T d1g8ma2 161 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDG 240 (393)
T ss_dssp GTCEEEEECTTCCCCSEEEEEETTEEEEEECCCCCCSGGGGCCBCSSSCCCCHHHHHHHHHHHHHHHTSCSSCEEEEETT
T ss_pred CCHHHHCCCCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 21343024644577666367750531110123332455551343202345168899999999999862366458996298
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~tvGIGaGQ~SRVdsv~iA~~KA~~~~~r~~p~v~~~~~k~~~~~~e~~na~~~~~~~~~~~~e~~~~~~~~f~~~~~~l 320 (393)
T d1g8ma2 241 QVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQL 320 (393)
T ss_dssp EEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTTCCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEECCCCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf 68831899765478999999999887764063011000000134555541677651354332035566655420143112
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~g~vlASDAFFPF~D~ie~aa~~Gv~aIiQPGGSirD~evI~aan~~~i~M~fTg~RhF~H 393 (393)
T d1g8ma2 321 TEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 393 (393)
T ss_dssp CHHHHHHHHTTCCCEEEEESSCCSSTHHHHHHHTTTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCCCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 3788764430357857980268687568999998599399879874251999999998598899878867288
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29642.93 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~~~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~ 80 (393)
T d1kwga2 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKWL 80 (393)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTTSCCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 94763584549999999999999982999899555346531888992687999999999998799999976777775343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1kwga2 81 VDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFR 160 (393)
T ss_dssp HHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTTTTSCCCSHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 21486501245778504666666667799999999999999998771688537887403555655775443167777778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
T d1kwga2 161 GWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTH 240 (393)
T ss_dssp HHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 88887665299999876530022223676545676555555662565899998777677787889875421465555435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~d~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 320 (393)
T d1kwga2 241 NFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRGVGRGRFWVMEQQPGPVNW 320 (393)
T ss_dssp EECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHHHTTTCEEEEEECCSCCSS
T ss_pred CCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 55566656423331256652121355555445566784223444446881688999999997347987036513666666
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~aia~G~~~~gy~~W~~~~~~~E~~~~gL~~~d~~p~~~~~~~~~~~~~l~~~~~~ 393 (393)
T d1kwga2 321 APHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQAPFAQEQMHAGLHRPDSAPDQGFFEAKRVAEELAALALP 393 (393)
T ss_dssp SSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBCCSSSTTTTSCCSBCTTSCBCHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 6468889867999999999977998889857557889750010014078899578999999999999974499
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29638.98 Aligned_cols=1 Identities=0% Similarity=-1.057 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 1 KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 91582452087636712799996999999979996998789878877654046765420477167666750015799876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf 89999489919999822898205651245632431157896689998447886542179998389819998740477534
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred CEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 10233103200014510002578986789997899989999389829998602332110000111112425638770046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~ 320 (393)
T d1sq9a_ 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 320 (393)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCC
T ss_conf 65320112428988421001035321344431156666431023202358666001389888069877999899999999
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~~g 393 (393)
T d1sq9a_ 321 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393 (393)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEECCCCCCCCEEEEEECCCEEEEEECCC
T ss_conf 9799999886876137734899999999999831246998866766312368899799999199089990899
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=29640.28 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHH
T ss_conf 99899989984899999999997859899994677542211012111343321577887777622797079983078999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999975110120012342101232222222222333223354078999998431242011012111223356643233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 32222235555542135455777775310012111223310233310123112777654555542223555445655300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~ 320 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK 320 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCE
T ss_conf 15667764497268852012223455333337789998874034330466437898067999999999998761987524
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T d1i24a_ 321 MTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDRVDTKQIMPSVSWKKIGVKTKSMT 393 (393)
T ss_dssp EEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGGCCGGGSSCCCCTTTCCSSCCCC-
T ss_pred EECCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
T ss_conf 5646899889866763789999974994056999999999999999887501764588888750011224669
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=100.00 E-value=0 Score=29638.58 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~f~w~~~~~gg~~~gi~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~d 80 (393)
T d1e43a2 1 VNGTLMQYFEWYTPNDGQHWKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSE 80 (393)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHH
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97617886766778889899999997899997599989969572689888999786567665434456766888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 f~~Lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1e43a2 81 LQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDG 160 (393)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999986998999870025557775444442235741113566654555344555667778877666555444788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~w~~~~GiDGfR~Da~~~~~~~f 240 (393)
T d1e43a2 161 ADWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAAKHIKFSF 240 (393)
T ss_dssp ESCBTTTTBCCEEEECSSSCCCCSSSCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 87666677677322157645555556555540202332311437714567799998766543486537861345689799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~ 320 (393)
T d1e43a2 241 LRDWVQAVRQATGKEMFTVAEYWQNNAGKLENYLNKTSFNQSVFDVPLHFNLQAASSQGGGYDMRKLLNGTVVSKHPLKS 320 (393)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCSTTTCGGGE
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 99999999874286057766533773776641222044430454117799999877216648899998515111680402
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 v~fl~nHD~~R~~~~~~~~~~~~~~la~a~ll~~~pG~P~IyyGdE~G~~g~~~~~~~~~~~~i~~l~~~rk~ 393 (393)
T d1e43a2 321 VTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQ 393 (393)
T ss_dssp EEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCCCCSSTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 5755178773413356763479999999999982899479871573299998998867789999999998684
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29638.44 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~f~w~~~~~~~~~~~i~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt 80 (393)
T d1hvxa2 1 AAPFNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGT 80 (393)
T ss_dssp CCCCCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCC
T ss_pred CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98988648996750668889709999997899997499989979888688889989886676555545556776878899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~df~~LV~~aH~~GIkVIlDvV~NHt~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (393)
T d1hvxa2 81 KAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFKWRWYH 160 (393)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999987998999984355446677542110134764334455787444455556777777778776655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~l~~~~~~w~~~~giDGfR~D~a~~i~ 240 (393)
T d1hvxa2 161 FDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIK 240 (393)
T ss_dssp EEEEEEETTTTEEEEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 78776556677676433268757556555554300101453300557737777788899998876388615642245578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~f~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T d1hvxa2 241 FSFFPDWLSYVRSQTGKPLFTVGEYWSYDINKLHNYIMKTNGTMSLFDAPLHNKFYTASKSGGTFDMRTLMTNTLMKDQP 320 (393)
T ss_dssp TTHHHHHHHHHHHHHCCCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGGTTTTCHHHHCG
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
T ss_conf 66799999999874477623551002763777777764045655003089999999987038779999999753423784
Q ss_pred ------------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~v~fl~NHD~~r~~~~~~~~~~~~~~~a~a~~l~~~pGiP~iyyGdE~G~~~~~~p~~~~~i~~~~~~rk~ 393 (393)
T d1hvxa2 321 TLAVTFVDNHDTEPGQALQSWVDPWFKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIPSLKSKIDPLLIARRD 393 (393)
T ss_dssp GGEEEESCCTTTSTTSTTCCCCCTTTHHHHHHHHHHSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 3186877578785513444587999999999999982899389883672299996999707786999997179
|
| >d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=29574.01 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~g~~T~~vH~G~~~~~~~g~v~pPI~~ssT~~f~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEg~~~a~~~ 80 (392)
T d1gc0a_ 1 LPGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLAL 80 (392)
T ss_dssp CCCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHCEECCCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEH
T ss_conf 94812020548988877899950882288887518889999862688688523289886899999999998399511101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Esp~NP~l~v 160 (392)
T d1gc0a_ 81 ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHM 160 (392)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEE
T ss_conf 44789999998752369980001211110145564321024774224578667999998478787599964666321354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Di~~i~~ia~~~g~~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~ 240 (392)
T d1gc0a_ 161 ADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAV 240 (392)
T ss_dssp CCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 24399999998459879983672574505867848988998665203598554431024306789898899999703886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~p~da~ll~rgl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~~~~~~~ 320 (392)
T d1gc0a_ 241 LSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGR 320 (392)
T ss_dssp CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHH
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
T ss_conf 88045799982206089999999999999999997399865786524458865332133456778379999959999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVGlEd~eDLi~Dl~~AL~aa~ 392 (392)
T d1gc0a_ 321 RFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKASA 392 (392)
T ss_dssp HHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 999858846671246876850108622264228999999759792969998601899999999999999629
|
| >d2d0ta1 a.266.1.2 (A:12-403) Indoleamine 2,3-dioxygenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Indoleamine 2,3-dioxygenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29569.05 Aligned_cols=1 Identities=100% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~f~vs~~~GFLp~~Pl~~LP~~y~~w~~i~~~lp~Ll~~~~lr~~V~~LP~l~~~~l~~~~~~r~a~~~lsfla~aYi 80 (392)
T d2d0ta1 1 SKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVEKLNMLSIDHLTDHKSQRLARLVLGCITMAYV 80 (392)
T ss_dssp CCSSSCBTTTBTSCSSCCCCCCGGGHHHHHHHHTHHHHHHTTCHHHHHHHCCCCCSTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 97334087768899984565786327999999987887755809999984786784433896999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 w~~~~~~~~~~LP~~Ia~Pl~~vs~~Lg~pP~ltYa~~~L~Nw~~~dp~~~~~~dNl~~i~~F~g~~dE~~F~lv~v~iE 160 (392)
T d2d0ta1 81 WGKGHGDVRKVLPRNIAVPYCQLSKKLELPPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVE 160 (392)
T ss_dssp HTTSSSCCCSEECHHHHHHHHHHHHHHTCCSSCCHHHHTTSSEEESSTTSCSCGGGEEESCCSSTTSCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 07899977778987888999999997499986516556310310058778887330556402789974135789879999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~l~~~~~~~~a~~~~d~~~~~~~l~~i~~~i~~i~~~~~~m~e~~~p~~fy~~~R~fi~G~k~~~~~p~GviYeg 240 (392)
T d2d0ta1 161 IAAASAIKVIPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGNPQLSDGLVYEG 240 (392)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCHHHHHHTHHHHTCCBSSCGGGTTCBEETT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEECCCCCCCCCCEECC
T ss_conf 86446999999999998767758799999999999999999998502029855621423545322437776888730036
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~p~~~~G~SgaQSsii~~lD~~LGv~h~~~~~~l~~~L~~mR~YmP~~HR~Fl~~l~~~~~ir~~v~~~~~~~L~~a 320 (392)
T d2d0ta1 241 FWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMPPAHRNFLCSLESNPSVREFVLSKGDAGLREA 320 (392)
T ss_dssp TCSSCBCBCCCCGGGCHHHHHHHHHTTCCSSCSSSHHHHHHHHHGGGSCHHHHHHHHHHHTSCCHHHHHHTTCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
T ss_conf 77776426788766664089999995785668875088999999985739999999999840436788870588899999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 y~~~v~~l~~FR~~H~~~v~~YIi~~~~~~~~~~~~~~~~~~~~~~gTGGT~~~~fLk~~rd~t~~~~~~~~ 392 (392)
T d2d0ta1 321 YDACVKALVSLRSYHLQIVTKYILIPASQQPKENKTSEDPSKLEAKGTGGTDLMNFLKTVRSTTEKSLLKEG 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHTC-------------------CTHHHHHHHHHHHHHHHHTCSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999886641223678888888888217885488999997767887761389
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=29567.32 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E 80 (392)
T d2pula1 1 KTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIE 80 (392)
T ss_dssp CCCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHHHHHHH
T ss_conf 99877269989999999984998988873699807985276899995799848999617713034677788877899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~~~~~ 160 (392)
T d2pula1 81 SSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQL 160 (392)
T ss_dssp HHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
T ss_conf 99999865057988552899859887798713577653022201542128999999999999998735033442111012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~n~~l~~~~e~~~~~~py~~~~~~~~~~~~~~~~~~l~~d~~l~~~~~~l~~~~~~~~~~LiHGDl~~gNIlv~~~ 240 (392)
T d2pula1 161 VKQFTNPELCDITERLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEH 240 (392)
T ss_dssp HHHTCCHHHHHHHHHHTTTGGGTTCTTCCCCGGGHHHHHHHHTCHHHHHHHHHHHHHHHHBCCEEECSCCCGGGEEECSS
T ss_pred CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCC
T ss_conf 33446578887777640104788988741065455778765520789999999874323688600335776784667599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~vID~E~a~~G~~~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 320 (392)
T d2pula1 241 ETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADREPLYEHVNQVWETFEETFSEAWQKDSLDVYANIDGYLTDTLS 320 (392)
T ss_dssp CEEECCCTTCEEECTHHHHHHHHHHHHHHHHHSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTSTTHHHHHHH
T ss_pred CEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 30895226522287899999999999999740663034568999999999999999999876165500034899999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~d~~~~~g~~~~rr~~g~a~~~d~~~i~~~~~r~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 392 (392)
T d2pula1 321 HIFEEAIGFAGCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVIELFKLLVK 392 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCCHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 999999998889999987341444421315798889999999999999999615512999999999999709
|
| >d1xima_ c.1.15.3 (A:) D-xylose isomerase {Actinoplanes missouriensis [TaxId: 1866]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Actinoplanes missouriensis [TaxId: 1866]
Probab=100.00 E-value=0 Score=29566.40 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~kfs~g~Wt~~~~g~d~FG~~tr~~~~~~e~~~~l~~lG~~g~~fHd~dl~P~~~~~~~~~~~~~~~k~~l~~t 80 (392)
T d1xima_ 1 VQATREDKFSFGLWTVGWQARDAFGDATRTALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET 80 (392)
T ss_dssp CCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99986673579960366768799998877754799999999985998686067877888998788999999999999863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Gl~~~~~t~nlf~~p~f~~Ga~TsPD~~vR~~Ai~~~k~aID~aaeLGa~~~v~W~G~~G~~~~~~~d~~~~~~~~~e~l 160 (392)
T d1xima_ 81 GLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREAL 160 (392)
T ss_dssp TCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 98234663342447143158877939999999999999999999995898379637877667876558999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~v~dya~d~g~gv~~~IEpKP~EP~~~~~i~d~~~al~~i~~vg~p~~vgvnlD~gH~~~ag~~~~~~ia~a~~~gkL~ 240 (392)
T d1xima_ 161 NLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGHAIAFVQELERPELFGINPETGHEQMSNLNFTQGIAQALWHKKLF 240 (392)
T ss_dssp HHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHCCCEE
T ss_conf 99999887508885598603778887543407799999999971990036674113245433798579999998659789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 hvHlND~~~~~~D~DL~~Gs~~~~~~~~l~~~l~~g~~g~~~~~G~~~fD~~~~r~~~~~~~~~~~~~~~~~~~~l~~~a 320 (392)
T d1xima_ 241 HIDLNGQHGPKFDQDLVFGHGDLLNAFSLVDLLENGPDGAPAYDGPRHFDYKPSRTEDYDGVWESAKANIRMYLLLKERA 320 (392)
T ss_dssp CCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHSCGGGSCSCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99748998989888988898788899999999984777776777875402587677871069999999999999999999
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~l~~d~~~~~al~a~~~~~~~~~tl~~~~~~~~~~a~~~~~~~~~~~~~~~rg~~~~~l~q~~~~~l~~~~ 392 (392)
T d1xima_ 321 KAFRADPEVQEALAASKVAELKTPTLNPGEGYAELLADRSAFEDYDADAVGAKGFGFVKLNQLAIEHLLGAR 392 (392)
T ss_dssp HHHHHCHHHHHHHHHTTSGGGGSCSSCTTCCHHHHHHCGGGTTTCCHHHHHTSCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 998778788999998665663376556564468998767533346877786534369999999999972689
|
| >d1yvua2 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: PIWI domain domain: Argonaute homologue Aq 1447 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=29564.28 Aligned_cols=1 Identities=0% Similarity=0.636 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~f~~~l~~~~~~~G~~~~~~~~~~ 80 (392)
T d1yvua2 1 KLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFLKELINFLKNKGIKLKIKGKSL 80 (392)
T ss_dssp ECCCCCCEECSSCCEECCSSCCHHHHHHCCCCCSCSEEEEEEEEEEC-----CHHHHHHHHHHHHHHTTTCEEEEEEEEE
T ss_pred CCCCHHHEECCCCCCCEEEECCEEHHHHCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCE
T ss_conf 92110210135899742223320224324732356634424789999631066799999999999986292645788671
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~Y~~IK~~~~~~gIptQ~i~~~tl~~~~~~~~~~NIa 160 (392)
T d1yvua2 81 ILAQTREEAKEKLIPVINKIKDVDLVIVFLEEYPKVDPYKSFLLYDFVKRELLKKMIPSQVILNRTLKNENLKFVLLNVA 160 (392)
T ss_dssp EECSSTTHHHHHHHHHHTTTSSCSEEEEEEC----------CHHHHHHHHHHHHTTCCCEEEEHHHHHHSCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCHHHHHHHH
T ss_conf 31277511599999998402677789999768888665554047999999985499664898866616898358999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 lqinaKlGGipw~l~~~~~~~tmiIGiDv~h~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ee~~~~~~~~~l~~ 240 (392)
T d1yvua2 161 EQVLAKTGNIPYKLKEIEGKVDAFVGIDISRITRDGKTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEKAIGDVFSL 240 (392)
T ss_dssp HHHHHHTTCCSCEESCCTTCCSEEEEECEEECCCSSSCCCEEEEEEEECTTSCEEEEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999849834688788999759999998715888984638999999868997789998854776078999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~P~rIIi~RdG~~~~~El~~i~~a~~~~~pki~~IvV~Krh~~Rff~~~~~~~Gt~v~~~~~~~~~~~s~~~~ 320 (392)
T d1yvua2 241 LEKLGFKKGSKIVVHRDGRLYRDEVAAFKKYGELYGYSLELLEIIKRNNPRFFSNEKFIKGYFYKLSEDSVILATYNQVY 320 (392)
T ss_dssp HHHTTCCTTCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEEECSSCCCEECSCSCCTTEEEEBSSSEEEECCSCCCS
T ss_pred HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCCCCCCEEECCCCEEEEEECCCCC
T ss_conf 99964999866999958877379999999999864995899999815882656789999998771798929999768857
Q ss_pred -----------------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 qGT~rP~~Y~vl~d~~~~d~l~~lt~~Lc~l~~~~t~svslPapi~YA~~lA~~~r~~~~p~~~~~~~~~~l 392 (392)
T d1yvua2 321 EGTHQPIKVRKVYGELPVEVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKKEGDIMYWL 392 (392)
T ss_dssp TTCCCCEEEEEEECSSCHHHHHHHHHHGGGGGCCSSSCCCSCTTTTTHHHHHHHHHTCSSCCEEEESCCTTC
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 877788589998898998999999999775126718998007799999999999751178654575524219
|
| >d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29494.13 Aligned_cols=1 Identities=100% Similarity=1.168 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 k~~T~~vh~g~~~~~~~g~v~pPi~~sst~~f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~~~a~~~~ 80 (391)
T d1cl1a_ 1 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 80 (391)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCEECCCCCCCCCCCCCCCCEECCCCEEECCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 91400360898999889984498548885362898999987527766866767899865999999999981995279851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~ 160 (391)
T d1cl1a_ 81 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 160 (391)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGTCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 50001110222046778769983355520133322011233333200267311122233345553355303576532112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Di~~i~~~a~~~~~g~~~vVDnT~atP~~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~ 240 (391)
T d1cl1a_ 161 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMV 240 (391)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCEEEEECCHHCCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCC
T ss_conf 32789998874157827998534332322111353340677623100036653334420003543210001111001357
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~p~~a~ll~rgl~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~e~~ 320 (391)
T d1cl1a_ 241 DADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEEL 320 (391)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
T ss_conf 85120244435316788999999999999988874465433333222204568988630589876402453388899999
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~f~d~L~l~~~a~SlG~~~SLi~~~~~~~~~~~~~~~~~gi~~~liRlSVGlEd~eDLi~Dl~~AL~~i~ 391 (391)
T d1cl1a_ 321 ANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV 391 (391)
T ss_dssp HHHHTTCSSCBCCSCCCSSSCEEEEECHHHHHHTSTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 99997499265856778876533478222343579247659996979999561999999999999999669
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=0 Score=29489.38 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 97999858873689999999999998899899997803676898779848987836877734856666999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~l~~~~~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1pn3a_ 81 EWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNSHRASI 160 (391)
T ss_dssp HHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHTHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999730798478734471378999999980876488531224455312220056788999888778899999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 240 (391)
T d1pn3a_ 161 GLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAA 240 (391)
T ss_dssp SCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHTTSSSCCEEEECTTCCSTHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHH
T ss_conf 37663200024566640231542431157777771565686567655677888642115897278722431223278999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~ll~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~ 320 (391)
T d1pn3a_ 241 KMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVV 320 (391)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCCHHHHHTTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTT
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 99999998569779994364333445688988995446879998425489852743799999982886899335567745
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~~~l~~~~ 391 (391)
T d1pn3a_ 321 EQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLFDAVSLEK 391 (391)
T ss_dssp BCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 29999999998798897685789999999999998399999999999999885279999999999987459
|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Histidine acid phosphatase domain: Glucose-1-phosphatase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29487.52 Aligned_cols=1 Identities=0% Similarity=-0.494 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~vP~g~~L~~V~vl~RHG~R~P~~~~~~~~~~~~~~~~~~~~~~~g~LT~~G~~q~~~lG~~lr~~Y~~~~~l~~~~~~ 80 (391)
T d1nt4a_ 1 QTVPEGYQLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECP 80 (391)
T ss_dssp CCCCTTEEEEEEEEEECCCCBCCCGGGHHHHHHTCSSCCCCCSSCTTCBCHHHHHHHHHHHHHHHHHHHHTTSSCSSSCC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99899998849999973867999988775313477344778999856110889999999999999998760677787778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~v~vrst~~~Rt~~SA~afl~Gl~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (391)
T d1nt4a_ 81 PPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQ 160 (391)
T ss_dssp CTTSEEEEECSSHHHHHHHHHHHHHHSTTSCCCEECCSCCSSCCTTTCCCCCCCCSHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 70005886178719999999999972788777756443457777666775456652106788787764310243139999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1nt4a_ 161 LLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVL 240 (391)
T ss_dssp HHHHHHTGGGSTTTTTTCCCCTTTCCCEEECCTTSCCEEESHHHHHHHHHHHHHHHHHTTCCTTTGGGGTSCSTTHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997633022144555555688888888875324766675077776599999999984899997434676769999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~~~k~~l~s~HD~ti~~~l~aLgl~~~~~p~~~~~~p~~s~~ 320 (391)
T d1nt4a_ 241 SKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKI 320 (391)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHTTTTTTTSCSEEEEECCHHHHHHHHHHTTBCCCCCTTCSSSSCTTCEE
T ss_pred HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999986287688764022899999999873589886279997156689999998389866788877888976638
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~fEl~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gC~~~~~~lCpl~~F~~~~~~~i~ 391 (391)
T d1nt4a_ 321 VFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK 391 (391)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCHHHHHHTCCCCSSSCCEEEECCBTTBCCCTTSCEEHHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCCEEEEEEECCCCHHHCCCCCCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99998617888755999986376132035665430103774156479988999996689999999999739
|
| >d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cysteine desulfurase IscS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29486.85 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~iYlD~aa~~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~ 80 (391)
T d1p3wa_ 1 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNL 80 (391)
T ss_dssp CCSEECBTTTCCCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
T ss_conf 97498537422679999999999999864665787316659999999999999999999739997819997988999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~ 160 (391)
T d1p3wa_ 81 AIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQ 160 (391)
T ss_dssp HHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBC
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCEEEC
T ss_conf 99642353057998899924654138999999997598899967887872768999975799948999978978881077
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~~~~gg~~~~~~~~ 240 (391)
T d1p3wa_ 161 DIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRS 240 (391)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTSC
T ss_pred CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCC
T ss_conf 78999998555895799730122577564202104653212231005788559999855021156875468856667515
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 320 (391)
T d1p3wa_ 241 GTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLA 320 (391)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSCHHHHHHHTTTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCE
T ss_conf 74023334453000467887766789999999999999877624806502444567518999857877699999718977
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr~~~~~~~~~~~ 391 (391)
T d1p3wa_ 321 VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ 391 (391)
T ss_dssp CBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHCC
T ss_pred EECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
T ss_conf 98262003776540599997399810069889996678899999999999999999999973967786329
|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Probab=100.00 E-value=0 Score=29485.94 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLae~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~ 80 (391)
T d1gpea1 1 YLPAQQIDVQSSLLSDPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTT 80 (391)
T ss_dssp CCCCCCCCCGGGSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTST
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHCCC
T ss_conf 98600145554112791212699664999896789999999998787982999837889888873040888998860897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~dw~~~t~p~~~~r~~~~~~G~~lGGsS~in~~~~~rg~~~d~~~w~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~ 160 (391)
T d1gpea1 81 VDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAA 160 (391)
T ss_dssp TBCCEECCCCTTSCCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHH
T ss_pred CCCCCEEEECCCCCEEEECEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCC
T ss_conf 66683413567995741121112576551430378603522334410037998644320378888765315886011035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~~~~~g~~~~~~~~~~~~~~~~~r~s~a~~~~~p~ 240 (391)
T d1gpea1 161 GHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN 240 (391)
T ss_dssp TCCCCGGGCCBSSSEEEBCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCC
T ss_conf 66766445678886432445565545789999999887548721201225765432222211320333442122025763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~r~nl~i~t~a~V~rIl~~~~~~g~ra~GV~~~~~~g~~~~v~A~keVILaAGai~SP~LLl~SGIGp~~~L~~~gI~~ 320 (391)
T d1gpea1 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQ 320 (391)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCC
T ss_pred CCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCHHHHHHCCCCE
T ss_conf 22013443305325688650788874688658833897278998488799926120466899866797388998779988
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 v~dlP~Gvg~nl~dh~~~~v~~~~~v~~~~~l~~~~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (391)
T d1gpea1 321 LLDLPVGICSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKSA 391 (391)
T ss_dssp SEECCTTCTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99897541215346766555034345477774331245686220432234443557666689998761249
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29485.38 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~v~Yei~~~~F~d~~~dg~Gd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h 80 (391)
T d1lwha2 1 MIGYQIYVRSFRDGNLDGVGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFH 80 (391)
T ss_dssp CCEEEECGGGTCCSSSSSSCCHHHHHHTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97999815610588999860999999855999975999899797987999999785577874712399999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~ 160 (391)
T d1lwha2 81 DSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYD 160 (391)
T ss_dssp HTTCEEEEEECTTBCCTTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCTT
T ss_pred HCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 35987844331013334444433223677655664200377545676546788754333677751236668867753433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 n~~v~~~i~~~~~~w~e~gvDGfR~Daa~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391)
T d1lwha2 161 NPQVFDEMKRLVLHLLDMGVDGFRFDAAKHMRDTIEQNVRFWKYFLSDLKGIFLAEIWAEARMVDEHGRIFGYMLNFDTS 240 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEETTGGGSSSSHHHHHHHHHHHHTTCCSEEEECCCSCSSSHHHHHHHHEEEECHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEECCCHH
T ss_conf 41146899998888760699700105588877764211588999998765300255411200011034446731134178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nhD~~~~~~~~~~~~~~~~~~a~~lllt~pG~P~IyyGdE~G~~~ 320 (391)
T d1lwha2 241 HCIKEAVWKENTRVLIESIERAVIAKDYLPVNFTSNHDMSRLASFEGGFSKEKIKLSISILFTLPGVPLVFYGDELGMKG 320 (391)
T ss_dssp HHHHHHHHHTCTHHHHHHHHHHTSSCSSEEEEESCCTTSCCGGGGGGCCCHHHHHHHHHHHTTSSSEEEEETTGGGTCCC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHCCCCC
T ss_conf 89999874034899999998631467765000001555543334123201567999999862689987886143027768
Q ss_pred ----------------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~r~pm~W~~~~~~~~~~~~~~~~~~~~~~~~nve~q~~~~~s~~~~~~~Li~lRk~~~al~r 391 (391)
T d1lwha2 321 VYQKPNTEVVLDPFPWNESMCVEGQTFWKWPAYNGPFSGISVEYQKRDPDSILSHTLGWTRFRKENQWIDR 391 (391)
T ss_dssp CCCSSCGGGGSCCCCSSTTSCSTTCCCSSCCSSCCSSSSCSHHHHTTCTTSHHHHHHHHHHHHHTCGGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 98899865311888878777788888887867897423117999875816899999999999813856239
|
| >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Bacillus pasteurii [TaxId: 1474]
Probab=100.00 E-value=0 Score=29422.96 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 GgiDtHvHfi~Pqq~~~al~sGiTT~~GgGtGpa~gt~att~tpG~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eq 80 (390)
T d4ubpc2 1 GGIDTHVHFINPDQVDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHGSSIAPIMEQ 80 (390)
T ss_dssp CEEEEEEECCCTTHHHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
T ss_conf 98220003348878999985697366468557777878745689888999999865527823115232666986799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~aGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfve~T~~a~~gRtiH~~HtEGaGGGHaPDii~~~ 160 (390)
T d4ubpc2 81 IDAGAAGLKIHEDWGATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMA 160 (390)
T ss_dssp HHHTCCEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGG
T ss_pred HHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC
T ss_conf 98655005013113647789999999864059268985387510101165899867962111467888889883268763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~nvLpsSTnPT~Pyt~nt~~EhldM~MvcHhL~~~ipeDvafAesRiR~eTiaAEdvLHD~GaiSi~sSDsQaMGRvg 240 (390)
T d4ubpc2 161 GHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAG 240 (390)
T ss_dssp GSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf 77865578999887886672666367377641479888026777763033012326777652486444136753246400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 Evi~Rtwq~A~kmk~qrG~l~~d~~~~DN~RvkRYiAKyTINPAIahGish~VGSvE~GKlADG~a~~~tsvtFVSqaAi 320 (390)
T d4ubpc2 241 EMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADGDLIHDTNITFMSKSSI 320 (390)
T ss_dssp CHHHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCTTHHHHSCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
T ss_conf 67776778898877751489875566777013202530246806750741125764678434876345764899858887
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 d~Gi~e~LGL~k~l~pVkn~R~ItKkDMk~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 390 (390)
T d4ubpc2 321 QQGVPAKLGLKRRIGTVKNCRNIGKKDMKWNDVTTDIDINPETYEVKVDGEVLTCEPVKELPMAQRYFLF 390 (390)
T ss_dssp HTTHHHHHTCCSEEEECCCCSSCCGGGSTTCCCCCCCEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred HCCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEEECCCCCCCCCCHHCCCCC
T ss_conf 5777677088644886058887786785015789983689986689889999046876756630120177
|
| >d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate kinase superfamily: Phosphoglycerate kinase family: Phosphoglycerate kinase domain: Phosphoglycerate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29419.14 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 mktl~d~~~~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg~~~~~Sl~~v~~~l~~~ 80 (390)
T d1v6sa_ 1 MRTLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDPKYSLAPVGEALRAH 80 (390)
T ss_dssp CCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCSSCCGGGCSHHHHHHHHHH
T ss_pred CCCHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97412258789999999403777559908976899999999999997899899995589999989761379999999752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~~v~~~~~~~~~~~~~~~~~l~~g~i~lLENvRF~~~E~~nd~~f~~~La~l~DiyVNDAF~~aHR~haS~vgi~~~l 160 (390)
T d1v6sa_ 81 LPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL 160 (390)
T ss_dssp CTTEEECCSCTTSHHHHHHHHTCCTTCEEECSCGGGSTTTTTTCHHHHHHHGGGCSEEEECCGGGTTSCCCCCCCGGGTS
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCHHHH
T ss_conf 46532653101122122222346665378651123245521165277776652476589631466665056622501333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ps~aG~l~ekEi~~L~~~l~~~~rP~vaIlGGaKvsdKi~~i~~l~~k~D~iiigG~mAntFL~a~G~~IG~sl~e~~~~ 240 (390)
T d1v6sa_ 161 PAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRL 240 (390)
T ss_dssp CEEECHHHHHHHHHHHTTTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 45668999999999999985446750899834640236999999997525666644177999997597668634431146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~a~~~~~~i~lp~dv~~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmGvfE 320 (390)
T d1v6sa_ 241 DLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFE 320 (390)
T ss_dssp HHHHHHHHHHHHHTCEEECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSCTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 66676777654302333333211220123677532356433310024432000134677887750264489975644502
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~F~~GT~~i~~aia~~~~a~sIiGGGdT~aai~~~g~~~~fshVSTGGGA~Le~L~G~~LPgi~aL~~ 390 (390)
T d1v6sa_ 321 VPPFDEGTLAVGQAIAALEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG 390 (390)
T ss_dssp STTTTHHHHHHHHHHHTCSSCEEEEESHHHHHHHHTTTCGGGSSEECCSSSHHHHHHHHSCCHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHCC
T ss_conf 5743079999999998558997999488999999974986787179577899999977999642143159
|
| >d1nsca_ b.68.1.1 (A:) Influenza neuraminidase {Influenza B virus, different strains [TaxId: 11520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza B virus, different strains [TaxId: 11520]
Probab=100.00 E-value=0 Score=29418.11 Aligned_cols=1 Identities=0% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~r~ge~~~n~~~lVtREPyVSC~p~eC~~FaL~QGt~l~~kHSNgTi~DRsp~RtL 80 (390)
T d1nsca_ 1 EPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHL 80 (390)
T ss_dssp CCCCCCCCCBCSCSSEEEEEEECGGGGCCTTSCCCBEEEEEEEEEECSSCEEEEEEEEEEESSSSCCTTTTCSCCSSCEE
T ss_pred CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEE
T ss_conf 97554451210452123420227210254446674069727601018430145862054111686668841456411201
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~s~~lG~~P~~~ns~f~~vaWSsssCHDGk~wl~i~vtG~d~nA~A~~~Y~g~~tdsI~SW~~nILRTQESeCvCinG~C 160 (390)
T d1nsca_ 81 ISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDC 160 (390)
T ss_dssp EEEETTSCCBTTTCEEEEECSEEEEEECSSCEEEEEEESCGGGCEEEEEETTEEEEEEECSSSSCCEECSSCCEEETTEE
T ss_pred EECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEHHHHHHHHCCCCCCCEEEECCEE
T ss_conf 22326799965663379987652433688724899878698872899998999964055334310200432048989989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~vvMTDGpA~~~A~~ki~~i~eGkIi~~~~l~g~~~HiEECSC~Yp~~~~V~CVCRDNW~GsNRPvv~in~~~~s~~~gY 240 (390)
T d1nsca_ 161 YLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRL 240 (390)
T ss_dssp EEEEEEECTTSCEEEEEEEEETTEEEEEECCEESCSBCEEEEEEESSSSEEEEEEECSSSCSSCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEE
T ss_conf 99992688778542589998456288776058886724752115899881699970788888998499545534145315
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 vCSGl~~DTPR~~D~s~tg~C~~n~~~G~~GVKGgf~~~~~~~~~~vW~GRTiS~~SRSGfE~~kV~~gw~~~~s~~~~~ 320 (390)
T d1nsca_ 241 MCTETYLDTPRPDDGSITGPCESNGDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVRYDGDPWTDSDALAH 320 (390)
T ss_dssp CCCSSCCSSSCCCTTCCCSSTTCCCSCCSSCCCCCEEEEECSSCEEEEEEECSSSSSSEEEEEEEEESSCTTTCCCCCEE
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEE
T ss_conf 85366578999888887767888876888863565011012468874764420476667507999778987768620005
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~q~iV~~~n~sgYSg~F~~~~k~C~~pCF~VElIRGrp~e~WTSnS~vvfCg~~s~~~~wswpDGA~i~l 390 (390)
T d1nsca_ 321 SGVMVSMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL 390 (390)
T ss_dssp EEEEEEEEEECCCEEEEEEECSSSEEEEEEEEEEECCCTTSCCEEEEEEEEECSSSCCCCCCCCCCCTTC
T ss_pred EEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 7899953788862178998589853022899997288766501375699972589977866998656689
|
| >d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=29415.17 Aligned_cols=1 Identities=0% Similarity=1.101 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~g~~gg~~~pe~l~~~~~~l~~~~~~~~~~~~f~~e~~~~~~~~~grpTPL~~~~~Ls~~lg~~IylK~E~ln 80 (390)
T d1qopb_ 1 TTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLL 80 (390)
T ss_dssp CCSSCCEETTEEEEESCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGS
T ss_pred CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHEHHHHHHHHCCEEEEEEECCC
T ss_conf 98777865683999687888999999999999997397899999999874489996553758654535977999971487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ptGS~K~R~a~~~i~~A~~~G~~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~ 160 (390)
T d1qopb_ 81 HGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHS 160 (390)
T ss_dssp TTSBTHHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
T ss_conf 44656604899999987543873023103477899999999985367459963320011235888999865966999527
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~ 240 (390)
T d1qopb_ 161 GSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 240 (390)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHEE
T ss_conf 85136676999999976333555530343234334654110156655012389999970986306886235410111100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~f~~~~~~~~ig~ep~~~g~~~~~~~a~~~~g~~g~~~~~~~~~~~~~~g~~~~~~s~a~gl~~~~~~~~~~~l~~~g~ 320 (390)
T d1qopb_ 241 ADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGR 320 (390)
T ss_dssp GGGTTCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTS
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 11004663248613566356565444551035744554112454113688864443222455334662067899986286
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~vtD~Ea~~a~~~La~~EGI~~a~Esa~Ava~Ai~~a~~~~~~~~~VVv~lsG~G~kD~~~~~~~l 390 (390)
T d1qopb_ 321 ADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDIL 390 (390)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHHHHHHC
T ss_pred EEEEEECHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHC
T ss_conf 3999999999999999999966984168269999999998635579998899997889734799999639
|
| >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Hypothetical oxidoreductase yqhD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29412.38 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~m~~f~f~~P~~I~fG~g~l~~l~~~~~~~~~vliV~~~~~~~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~ 80 (390)
T d1oj7a_ 1 KAGLNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNA 80 (390)
T ss_dssp CBCCCCEEEEEEEEEEESTTGGGGHHHHSCTTCEEEEEECSSHHHHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHH
T ss_pred CCCCCCCEEECCCEEEECCCHHHHHHHHHHCCCCEEEEECCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99888808748986898569999999998679988999897168774399999997189947999282379999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagtgse~t~~avi~~~~~ 160 (390)
T d1oj7a_ 81 VKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTT 160 (390)
T ss_dssp HHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSEEEEEETTT
T ss_pred HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99976337877985478854408999999751874300344312466433467873335665443111243101124443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~k~~~~~~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~~a~~~~~~~~~~l~~a~~~~~d 240 (390)
T d1oj7a_ 161 GDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIHDRFAEGILLTLIEDGPKALKEPEN 240 (390)
T ss_dssp TEEEEEECGGGSCSEEEECGGGGTTCCHHHHHHHHHHHHHHHHHHHSSSCBCCHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCEECCCHHHCCCCEEEEHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCC
T ss_conf 11000110000145046514430369744430322558888889871775321230367765555530134777760446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~ar~~l~~as~~a~~~~~~~g~~~~g~~Hal~h~l~~~~~v~HG~~~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~ 320 (390)
T d1oj7a_ 241 YDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEG 320 (390)
T ss_dssp HHHHHHHHHHHHHHSSSTTTTTSCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999888888998865540486666531344334310268765311233221332001111599999999995485469
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~e~~~~~i~~i~~~~~~lglP~~L~e~Gv~~~~i~~la~~~~~~~~~~~~np~~l~~d~i~~il~~A~ 390 (390)
T d1oj7a_ 321 SDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR 390 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCCSGGGGTCCSTTHHHHHHHHHHTTCSSBTTTTCBCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 9699999999999999998498999899199999999999999863555309997899999999999509
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29412.89 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~ 80 (390)
T d1ud2a2 1 DGLNGTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTK 80 (390)
T ss_dssp CCCCCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH
T ss_pred CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 99777699844057788897799999979999976998899697803888889998866774445554457768889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~efk~lV~~~H~~GI~VilDvV~NHt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (390)
T d1ud2a2 81 AQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHF 160 (390)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999998558813898714554676630344420268654332345543445554556776677678776543445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~dg~r~D~~~~~~~~~ 240 (390)
T d1ud2a2 161 NGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAIKHIPFWY 240 (390)
T ss_dssp EEEEEETTTTEEEEEEETTCCCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCHHH
T ss_conf 78876655777751211687655555422222222334410004889999988765301210124653334320067677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (390)
T d1ud2a2 241 TSDWVRHQRNEADQDLFVVGEYWKDDVGALEFYLDEMNWEMSLFDVPLNYNFYRASQQGGSYDMRNILRGSLVEAHPMHA 320 (390)
T ss_dssp HHHHHHHHHHHCSSCCEEEECCCCSCHHHHHHHHHHTTTCSEEECHHHHHHHHHHHHHCTTSCGGGTTTTCHHHHCGGGE
T ss_pred HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 88888887643202103411124786110101245432333203678889999875134469999987533033783326
Q ss_pred ---------------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 v~fl~nHD~~r~~~~~~~~~~~~~~~~~~~il~~~pG~P~iy~GdE~G~~~~~~~~~~d~i~~l~~~R~~ 390 (390)
T d1ud2a2 321 VTFVDNHDTQPGESLESWVADWFKPLAYATILTREGGYPNVFYGDYYGIPNDNISAKKDMIDELLDARQN 390 (390)
T ss_dssp EECSCCTTTSTTSTTCCCCCTTTHHHHHHHHHSSSSSEEEEEHHHHHCBGGGTBCCCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 8870277665400013675789999999999985799849974265097998985126888999997389
|
| >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=29346.25 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~i~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (389)
T d1e9yb2 1 GIDTHIHFISPQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNASNDASLADQI 80 (389)
T ss_dssp EEEEEEETTCTTHHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999856870774586588877776552797608999998600377253662116779837899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~aGa~GlKiHEDwGatp~~Id~~L~vad~~dvqv~iHtDtlNE~Gfve~T~~a~~gRtiH~~HtEGaGGGHAPDii~~~~ 160 (389)
T d1e9yb2 81 EAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAG 160 (389)
T ss_dssp HTTCSEEEECGGGCCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGG
T ss_pred HHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCC
T ss_conf 72303220231026787888899998775095389438976654303648998679752003137777777617888705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~nvLpsSTnPT~Pyt~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTIaAEdvLhD~GaiSi~sSDsqaMGRvgE 240 (389)
T d1e9yb2 161 EHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGE 240 (389)
T ss_dssp STTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHH
T ss_conf 77766788999878666628886345241034798980267777630330223367776336854531366644443677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 vi~RtwQtA~kmk~~rG~l~~d~~~~DN~RvkRYiAKYTINPAIahGis~~VGSvE~GK~a~G~A~~~tSvtFVSqaAid 320 (389)
T d1e9yb2 241 VITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVHHGKAKYDANITFVSQAAYD 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCSCSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBGSTTHHHHHCEEEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
T ss_conf 89999998999998863687667776427777666650568577558211048625366135867665635886688875
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~Gi~~~LGL~K~l~pVkn~R~ItK~DM~~Nda~P~IeVDPETYeV~aDGelltcePA~~LPLAQRYFLF 389 (389)
T d1e9yb2 321 KGIKEELGLERQVLPVKNCRNVTKKDMQFNNTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF 389 (389)
T ss_dssp TTHHHHTTCCSEEEECCCCSSCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSCCSSSTTTCCC
T ss_pred CCCHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 787677387752786138887887785115789982689997689889999135765657630110177
|
| >d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Dehydroquinate synthase, DHQS domain: Dehydroquinate synthase, DHQS species: Aspergillus nidulans [TaxId: 162425]
Probab=100.00 E-value=0 Score=29336.52 Aligned_cols=1 Identities=0% Similarity=0.172 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 p~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ivtD~~v~~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~~gE~~ 80 (389)
T d1sg6a_ 1 PTKISILGRESIIADFGLWRNYVAKDLISDCSSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVS 80 (389)
T ss_dssp CEEEEETTEEEEEEETTHHHHTHHHHHHHHSCCSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGG
T ss_pred CCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
T ss_conf 91688769731898888078775999984179981899978965898999999999870742146762489981698452
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Ks~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~rgi~~i~vPTtlla~~Das~g~k~~in~~~~kn~ 160 (389)
T d1sg6a_ 81 KSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNL 160 (389)
T ss_dssp SSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEECSHHHHHTTTSSCEEEEEETTEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCCEEEECCCCCCCE
T ss_conf 89999999999999628876777569996563477889999999855876367314021256653232134211366421
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~g~~~~P~~V~iD~~~l~tlP~r~~~aG~~e~ik~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~I 240 (389)
T d1sg6a_ 161 IGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARI 240 (389)
T ss_dssp EEEECCCSEEEEEGGGGGTSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCCCCTTSCTTGGGHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
T ss_conf 21012045552005554341799998634235553212687888899986999987544201201322104699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~s~~~k~~iv~~d~~e~g~r~~ln~GHt~~HAlE~~~~~~~lHGEaVaiGml~~~~ls~~~g~l~~~~~~~i~~~l~~l 320 (389)
T d1sg6a_ 241 LASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAY 320 (389)
T ss_dssp HHHHHHHHHHHHC-----CGGGGGGTTHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 99999863202333443263310135466788887632234568889998899999999993799999999999999986
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 gLPt~l~dl~~~~~~~~~~~~~~~l~~~~~~DKK~~~~~i~~vl~~~iG~~~~~~~~~~~~~~i~~~L~ 389 (389)
T d1sg6a_ 321 GLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIGTPYETRASVVANEDIRVVLA 389 (389)
T ss_dssp TCCCSTTCHHHHHHTTTCCCCHHHHHHHHHTCCE-------ECCEEETTEESSSSCEECCHHHHHHHCC
T ss_pred CCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHC
T ss_conf 999654344200013434599999999986378857997899967457767663277599899999739
|
| >d1jiha2 e.8.1.7 (A:1-389) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: Lesion bypass DNA polymerase (Y-family), catalytic domain domain: DNA polymerase eta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29336.04 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~l~~~~~~~~~~~~vI~hiDmD~FyAsvE~~~~p~l~~~Pv~V~q~~~via~sYeAR~~GVk~gm~~~eA 80 (389)
T d1jiha2 1 MSKFTWKELIQLGSPSKAYESSLACIAHIDMNAFFAQVEQMRCGLSKEDPVVCVQWNSIIAVSYAARKYGISRMDTIQEA 80 (389)
T ss_dssp CCSSBHHHHHGGGCTTTGGGSTTCCEEEEECTTHHHHHHHHHTTCCTTSCEEEEETTEEEEECHHHHTTTCCTTSCHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCEEEEECHHHHHHCCCCCCCHHHH
T ss_conf 98413645877279752236877679997365089989967563526997799008869998999997199878929999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~k~CP~li~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~Yr~~S~~v~~il~~~~~~vE~~SIDEaflD 160 (389)
T d1jiha2 81 LKKCSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFKSACDLVERASIDEVFLD 160 (389)
T ss_dssp HHHCTTCEEEECCEEETTCSSEECCTTCSTTCSCTTSCCCSSSEEECCHHHHHHHHHHHHHHHHHCSCEEEEETTEEEEE
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEE
T ss_conf 98697636852121234444333344320001331001465326898899999999999999986888057416637897
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 lT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 240 (389)
T d1jiha2 161 LGRICFNMLMFDNEYELTGDLKLKDALSNIREAFIGGNYDINSHLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVILAL 240 (389)
T ss_dssp CHHHHHHHHHHCCSCBSSSSCBHHHHTHHHHHHHHHCCSCTTSBCCCCCGGGGGCCCCSEECCTTCCCSCCSHHHHHHHH
T ss_pred CCHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 50023220355431000122112332212345433332233234456642111222244433433344444356654028
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~~ia~~IR~~I~~etGlt~S~GIa~NK~LAKlAs~~~KPngqtvl~~~~v~~fl~~~~lpi~ki~GIG~k~~kkL~~~l 320 (389)
T d1jiha2 241 GSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKNDCLLDFLDCGKFEITSFWTLGGVLGKELIDVL 320 (389)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEESSHHHHHHHHTTTCSSCEEECCGGGHHHHHTSSSCCGGGSGGGSSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999999869984302455289999988744988558667899999997267872020787889999999984
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 gi~t~~di~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~l~Rg~~~~pv~~r 389 (389)
T d1jiha2 321 DLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSDYDRSTSNIDPLKTADLAEKLFKLSRGRYGLPLSSR 389 (389)
T ss_dssp TCCSSSHHHHHHHHSCSCHHHHHHHHHHHHTSTTCCTTTCSSCTTCHHHHHHHHHHHTTTCCCCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 897613399987653688999855000655541068776555753244248888644147638888889
|
| >d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: AAT homologue TM1698 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=29335.57 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~r~~~~~~~~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~ 80 (389)
T d2gb3a1 1 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRR 80 (389)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHT
T ss_pred CCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 97456348987788899999999976998888989989999889999999850777778899868999999999998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (389)
T d2gb3a1 81 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERT 160 (389)
T ss_dssp SCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTE
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 39876552699625543221222112235798688707987433432113686321232222355420245554215674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~ 240 (389)
T d2gb3a1 161 KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC 240 (389)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEE
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 07984798766443210899999984234499999994131002323322222222223443345565334576563132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~l 320 (389)
T d2gb3a1 241 LITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAEL 320 (389)
T ss_dssp EECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEEC
T ss_pred EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEC
T ss_conf 51100268998766420122223222222222322320002232333321002344445430463236999558999958
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 p~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~~l~~a~~~L~~~lk~f~~ 389 (389)
T d2gb3a1 321 PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMFCS 389 (389)
T ss_dssp SSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999986006329789994750146888889989999728999999999999999999619
|
| >d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147 {Chromobacterium violaceum [TaxId: 536]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: CV3147-like superfamily: CV3147-like family: CV3147-like domain: Hypothetical protein CV3147 species: Chromobacterium violaceum [TaxId: 536]
Probab=100.00 E-value=0 Score=29331.10 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~Ls~~Dl~~i~~Ga~iLGtGGGGdp~~~~~l~~~~~~~~~~~~~~V~li~~del~D~~~V~v~~mGAPtv~~E~~~~~ 80 (389)
T d2o3ia1 1 AFELSPSDLEPLLQGACFFGSGGGGTMISARHLAANFRKGDYYPTDKVRVVDVDEATDGDCVMVAYMGAPDAINQVQWPN 80 (389)
T ss_dssp CEEECGGGHHHHHHHHHHTTTTCSCCHHHHHHHHTTCSBTTTBSCSCEEEECGGGCCSSEEEEEEEEECHHHHTTCSSCH
T ss_pred CCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCEEEEEEEECCHHHHEECCCC
T ss_conf 93757999999851459997278876688999999986642257996699535336888899997640787883405799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~e~~~a~~~l~~~~g~~~~av~~~EiGG~Ns~~pl~~AA~~glPvVDaD~mGRAfPelqm~t~~i~G~~~~P~~lad~ 160 (389)
T d2o3ia1 81 GPVEAALAARQRLESQGRKLAYVVAPESGALGFVVASLVAAKLGLAVVDADGAGRAVPSLPMLTYAAAGVPPTPAFLAGE 160 (389)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHTCEEESBCSSSSCCSSGGGSHHHHTTCCCCSEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHEEHEECCCCCCCEEEECC
T ss_conf 75799999999999719975799951668722789999999719988747875456774322000105899887699728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Gn~~i~~~~~~~~~~~~~e~~~~~~e~~~R~~~~~~~~Gg~~~~a~~pm~~~~~~~~~~I~gTlS~A~~iGrav~~ar~ 240 (389)
T d2o3ia1 161 SGLCVELGVRMPPPDGQRREDISTVVEQMLRPILTNPQFGQFGGLAMWMMSPAQLGGALPVRGTLSRALKLGRALQDGKV 240 (389)
T ss_dssp SSCEEEEEEECCCCC---CCCHHHHHHHHHHHHTTSTTTCSEEEEEEEEECHHHHHHHCCSBSHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99779984023555412577899999998877766875174347862659989983201168559999999899998664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~l~~~~~~~g~~~l~~Gki~~v~r~~~~Gf~~G~v~ieg~~~~~~i~fqNE~L~a~~~g~~~~la~vPDLI~ 320 (389)
T d2o3ia1 241 KTAEAMLDFLRRELDIKGKLLFGPATLASPEVSTAGGFDLGKVVLEDGERRCTVLYQNESLLAWDSALSHPLATAPDAIS 320 (389)
T ss_dssp CSHHHHHHHHHHHHCCCCEEEEEEEEECCC----------CEEEEESSSCEEEEEESSSEEEEEETTCSSCSEETTSEEE
T ss_pred CCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEECCCEEEEEEEEECEEEEEECCCCCEEEECCCEEE
T ss_conf 24327999998732667868999689997799705871789999907985899999814189998798978997796799
Q ss_pred --------------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~lD~~tG~pitte~~~~~~~~g~~~~ryG~~V~Vi~~pa~~~wrt~~~l~~~GP~~~~fGy~~~y~P~e 389 (389)
T d2o3ia1 321 YFVEGEGQHVFSNGDLSGNDHGLDPSVRGRKAAVIALPAAAPLSEGLILQSFADELAQLGYLGPYAPVD 389 (389)
T ss_dssp EEECSSSCCCCCHHHHBCSSSSBCTTTTTSEEEEEEECCCGGGSSHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCHHHHHHCCCHHHHCCCCCCCCCCC
T ss_conf 986688864423332345556654234798899999609827486333655095055359997765288
|
| >d1f8ea_ b.68.1.1 (A:) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29268.64 Aligned_cols=1 Identities=0% Similarity=0.536 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~n~~kplC~i~G~a~~sKDN~IRig~~g~i~V~REPyVSC~p~eC~~FaL~QGa~l~~kHSNgTi~DRsp~RtL~s~ 80 (388)
T d1f8ea_ 1 RDFNNLTKGLCTINSWHIYGKDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGKHSNGTIHDRSQYRALISW 80 (388)
T ss_dssp CCCCCCCCEECCCSEEEEEEECCHHHHHTTSCBEEEEEEEEEEETTEEEEEEEEEEEESSSGGGTTTTCSCCTTCEEEEE
T ss_pred CCHHHCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEC
T ss_conf 94011376666433146661477168638987899826512028202034762043101786668841566510113441
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~lG~~p~~~ns~f~~vaWSsssCHDGk~Wl~i~vtG~D~nA~A~~~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vv 160 (388)
T d1f8ea_ 81 PLSSPPTVYNSRVECIGWSSTSCHDGKTRMSICISGPNNNASAVIWYNRRPVTEINTWARNILRTQESECVCHNGVCPVV 160 (388)
T ss_dssp ETTSCCBTTTCEEEEESSEEEEEECSSSEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCCCBTTEEEEE
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEE
T ss_conf 26899966774589998643444689724899878798883799998999963265444311100322048989988999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 mTDG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg 240 (388)
T d1f8ea_ 161 FTDGSATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEITCTCRDNWQGSNRPVIRIDPVAMTHTSQYICSP 240 (388)
T ss_dssp EEEECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEEETTTTEEEEEECCCS
T ss_pred EECCCCCCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEECC
T ss_conf 92688778631589998566388876169886731763422899946999706888888975995455431443278646
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~DTPR~~D~s~g~C~~p~~~~g~~GVKGf~f~~G~~vW~GRTiS~~sRsGfE~~~v~~gwt~~~s~~~~~q~iv~n~n 320 (388)
T d1f8ea_ 241 VLTDNPRPNDPTVGKCNDPYPGNNNNGVKGFSYLDGVNTWLGRTISIASRSGYEMLKVPNALTDDKSKPTQGQTIVLNTD 320 (388)
T ss_dssp SCCSSSCCCCCSSCCSSSCCCSCCSCCCCCCEECCTTSCEEEECSCSSSSEEEEEEECTTTTTCTTCCCSEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHCCEEEEECCC
T ss_conf 44789998988866478987778888734314766897687664247667761699934875276603204228996587
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 wSGYSGsF~~~~~~~~C~~pCFyVElIRGrp~E~~v~WTSnSiv~fCG~~~~~g~~swpDGA~i~ff~ 388 (388)
T d1f8ea_ 321 WSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCSSTEFLGQWDWPDGAKIEYFL 388 (388)
T ss_dssp ECCCEEEECCTTCSSSEECCEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGGC
T ss_pred CCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 77561771234348873011489999618876563467407779993679986786689865465559
|
| >d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Vacuolar ATP synthase subunit C superfamily: Vacuolar ATP synthase subunit C family: Vacuolar ATP synthase subunit C domain: Vacuolar ATP synthase subunit C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29265.89 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~y~lvSlP~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~IP~lKvGTLDsLv~lsDeL~KlD~~ve~vv~Kv~~ 80 (388)
T d1u7la_ 1 LYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIE 80 (388)
T ss_dssp CCCCCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGGTSEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97565069998778788889850468999985225887236304798777135999998788888788899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~R 160 (388)
T d1u7la_ 81 ILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAER 160 (388)
T ss_dssp HHHHTTSSCSSSCCSCCBTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHEEEECCCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987236110321676878138987564460444288889899999999999998889999999999999999998740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 K~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~ 240 (388)
T d1u7la_ 161 KKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQ 240 (388)
T ss_dssp HTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHH
T ss_pred CCCCCEEECCHHHHCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHCEECCCEEEEEEEEEHHHHH
T ss_conf 04785262427752798872553314058999961531788999986325762687155302568805899999723199
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 eF~~~aRE~kf~vRdF~y~ee~~~~~~~e~~~l~~~~~~~~~~L~r~~~~~fse~f~~wiHiKalRvFVESVLRYGLP~~ 320 (388)
T d1u7la_ 241 EFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPH 320 (388)
T ss_dssp HHHHHHHHTTCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999997594304266797899999999999999999999999999999999999999998568766433453589834
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 F~~~li~p~~k~~kklr~~L~~~f~~L~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ey~PyV~~~i~l 388 (388)
T d1u7la_ 321 FNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYASLVDTEYEPFVMYIINL 388 (388)
T ss_dssp EEEEEEEECTTCHHHHHHHHHHHHGGGGCTTCC------------------------CCSSEEEEEEC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 13899950872589999999998634265300234446667776543212335677515549998349
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29264.35 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 gll~la~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 1 GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCCTHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 96999999998699999999999999868998999999999999869999999999999985999899999999996420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLK 160 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 00222222222121122222222222222222222222222221112222222222222222222110001356788887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 240 (388)
T d1w3ba_ 161 AIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 240 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 40258610689986363010247199999999999984946499999971552200529999999998577755479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 320 (388)
T d1w3ba_ 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999878999999999999984999899999999999974879999999986540487300101579999998789
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~D 388 (388)
T d1w3ba_ 321 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD 388 (388)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999999986889899999999999985999999999999997099989999999999998589
|
| >d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29263.32 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 lR~tT~GESHG~aig~vIdG~PaGl~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~v~ilSGv~~G~TtG~PI~~~I~N~D 80 (388)
T d1qxoa_ 1 MRYLTAGESHGPRLTAIIEGIPAGLPLTAEDINEDLRRRQGGYGRGGRMKIENDQVVFTSGVRHGKTTGAPITMDVINKD 80 (388)
T ss_dssp CEEEEECCTTSSEEEEEEECCCBTCBCCHHHHHHHHHHHHCSTTCCTHHHHCCCCCEEEESEETTEECSSCEEEEEECGG
T ss_pred CCEEECCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCC
T ss_conf 95541313688834899816186887499999999955798999997668999827994644389806774499998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~PRPGHAD~~~~~Kyg~~d~r~gggRsSaReTa~rVAaGaiAk~~L~~~gI~v~s~ 160 (388)
T d1qxoa_ 81 HQKWLDIMSAEDIEDRLKSKRKITHPRPGHADLVGGIKYRFDDLRNSLERSSARETTMRVAVGAVAKRLLAELDMEIANH 160 (388)
T ss_dssp GGGGTTTTCSSCCCGGGTTTTCCCSCCTTSSHHHHHHHHTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 77754444411123455432012457888435789987478656687751688999999999999999999819735235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 v~~IG~i~~~~~~~~~~~~~~~~~~~~~~~c~d~~~~~~m~~~I~~ar~~gDSlGG~ve~~~~gvP~GLG~pv~~d~kLd 240 (388)
T d1qxoa_ 161 VVVFGGKEIDVPENLTVAEIKQRAAQSEVSIVNQEREQEIKDYIDQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDRKLD 240 (388)
T ss_dssp EEEETTEECCCCSSCCHHHHHHHHHTSTTCCSCGGGHHHHHHHHHHHHHTTCCBCEEEEEEEESCCTTCSCSSSGGGCHH
T ss_pred EEEECCEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 68741320267443687888764311556467868855668889999853887676399999717833368866776541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~La~AlmSIpAvKgvEfG~GF~~a~~~GSe~nD~~~~~~~~~~~~~tN~~GGi~GGISnG~pI~~rva~KPtsSI~~~q 320 (388)
T d1qxoa_ 241 ARLAQAVVSINAFKGVEFGLGFEAGYRKGSQVMDEILWSKEDGYTRRTNNLGGFEGGMTNGQPIVVRGVMKPIPTLYKPL 320 (388)
T ss_dssp HHHHHHHHTSTTEEEEEETTGGGGGGSBGGGTSCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCE
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 89998774243113453056488897421455650100466784113688762016777788769999957865567755
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~Tvd~~~~e~~~~~~gRhDpCivpRAvpV~EAm~alvLad~~L~k~g~d~l~~~~~~~~~y~~~~~~~ 388 (388)
T d1qxoa_ 321 MSVDIETHEPYKATVERSDPTALPAAGMVMEAVVATVLAQEILEKFSSDNLEELKEAVAKHRDYTKNY 388 (388)
T ss_dssp EEECTTTCCEEEECCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHSCCSBHHHHHHHHHHHHHHHHTC
T ss_pred CCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 53566898067246898897075532899999999999999999857775999999999999998519
|
| >d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 3-hydroxykynurenine transaminase species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]
Probab=100.00 E-value=0 Score=29261.25 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~PGP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a 80 (388)
T d2ch1a1 1 KFTPPPASLRNPLIIPEKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAG 80 (388)
T ss_dssp CCCCCCGGGSSCCCCCCCBCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHH
T ss_pred CCCCCCHHHCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
T ss_conf 98999634437668885540108998889999997476778878899999999999999999689997199976848999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ea~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~ 160 (388)
T d2ch1a1 81 MEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP 160 (388)
T ss_dssp HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
T ss_conf 99999974211133333222310000033443311332123565445521012344430478633565302222322211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2ch1a1 161 LEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLL 240 (388)
T ss_dssp CTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHH
T ss_pred HHHHCCHHCCCCCEEEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 12200000146540366532102346621230576399982655457887289972427788754202575531025603
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~ 320 (388)
T d2ch1a1 241 LLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIM 320 (388)
T ss_dssp HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEE
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEE
T ss_conf 55543023320025576532778999999999998766677898887777877766553022323689788098489998
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~p~g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~~~~~~~ 388 (388)
T d2ch1a1 321 IPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDYIF 388 (388)
T ss_dssp CCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999998513998996788655698899717717899999999999999999961986589
|
| >d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
Probab=100.00 E-value=0 Score=29261.15 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~k~~~~~LtfDDVlLvP~~st~~~~~vdl~~~~t~~~~l~iPIisA~MDtVt~~~mAi~ma~~GGlgVihr~~~ie~q~~ 80 (388)
T d1eepa_ 1 NKITKEALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRK 80 (388)
T ss_dssp CCSCCCCCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 96333578841079827988777778354489538776699877169888788999999998798899908999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~~Vk~~~~~~~~~~~~d~~~~~~~~~t~~~~~~~~~a~~d~~~~~~~p~~~~d~~~~l~vgaAvg~~~~~~~ra~~L~ 160 (388)
T d1eepa_ 81 EIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELV 160 (388)
T ss_dssp HHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
T ss_conf 99986230044520036763310223300554422547877188876506777655224101220589789999999877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~aG~D~ivID~AhG~s~~~~~~i~~ik~~~~~v~vIaGNV~T~e~a~~L~~~GaD~VkVGiGpGs~CtTr~~~GvG~pq~ 240 (388)
T d1eepa_ 161 KAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQI 240 (388)
T ss_dssp HTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHH
T ss_pred HHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 51254543103663167799999999987899866500126799999998629775543122232345654236674238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 sai~~~~~~~~~~~vpiIADGGi~~~Gdi~KAla~GAd~VMlG~~lAg~~Espg~~~~~~g~~~k~~~gm~S~~a~~~g~ 320 (388)
T d1eepa_ 241 TAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGS 320 (388)
T ss_dssp HHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC--------------
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHCCCCCCCEEEEECCCEEECCCCCCCHHHHHCCC
T ss_conf 89999999861577157853666737730136785155034053654136788418985892740155665487775445
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~~~~l~gglrs~m~y~Ga~~l~e~~~~~~fv~vt~~ 388 (388)
T d1eepa_ 321 KSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISHS 388 (388)
T ss_dssp ----------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCC
T ss_conf 21013334664422346704987078887899999999999997421586629998539889997899
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=0 Score=29260.96 Aligned_cols=1 Identities=200% Similarity=1.865 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~t~~nw~~~~~~r~~f~~~~~~~pt~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~t~a 80 (388)
T d2dcfa1 1 STGQHPARYPGAAAGEPTLDSWQEPPHNRWAFAHLGEMVPSAAVSRRPVNAPGHALARLGAIAAQLPDLEQRLEQTYTDA 80 (388)
T ss_dssp CCCCCCCSSTTCCTTCSCTTTTTSTTHHHHHTTCGGGTSCCCCCCSCC----CCCEEECTTHHHHCTTHHHHHHHTTEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCE
T ss_conf 99888455889523677847864886301205558774884342079888775333212444455433999987428847
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~lV~~~G~iv~E~y~~~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~~ylPe~~~~~~~~iTi~~LL~mtsGl 160 (388)
T d2dcfa1 81 FLVLRGTEVVAEYYRAGFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISI 160 (388)
T ss_dssp EEEEETTEEEEEEECTTCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGGGTTSTTSSCBHHHHHTTCBCC
T ss_pred EEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCC
T ss_conf 99998998999974699884320148999889999999999734854456752302454404543215677764233677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pg~~f~Y~~~~~~lLg~iie~~tG~~~~~~~~e~i~ 240 (388)
T d2dcfa1 161 DYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGEFQYCSANTDVLAWIVERVTGLRYVEALSTYLW 240 (388)
T ss_dssp SCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCCSCBSSCCCCHHHHHHHHHHHHHHHCSCHHHHHHHHTG
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 64234355651355666653101001246188999874067679998789806789999999987517630222333204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~PlGm~~~~~~~~~~~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~qils~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 320 (388)
T d2dcfa1 241 AKLDADRDATITVDTTGFGFANGGVSCTARDLARVGRMMLDGGVAPGGRVVSEDWVRRVLAGGSHEAMTDKGFTNTFPDG 320 (388)
T ss_dssp GGTTCSSCCEECBCTTCCBCTTTCEEECHHHHHHHHHHHHTTTEETTEECSCHHHHHHHHHCCCTTTCCCHHHHHHCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 84212222222334567632100323132214577788874885488605649999998568972001245656678999
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Yg~~ww~~~~~~~~~~~~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~i~~~l~av 388 (388)
T d2dcfa1 321 SYTRQWWCTGNERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVSRALDAV 388 (388)
T ss_dssp EEETTEEECCCTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHHHHTSCC
T ss_pred CCCCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 97864551699997089887789689999069989999599999985468999999999999997229
|
| >d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: DNA/RNA polymerases superfamily: DNA/RNA polymerases family: DNA polymerase I domain: phi29 DNA polymerase species: Bacteriophage phi-29 [TaxId: 10756]
Probab=100.00 E-value=0 Score=29259.10 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~t~~s~~~~~fk~~~~~~~~~~~~p~~~~~~~~~ir~~y~GG~~~~~~~~~~~~~~~i~~yD~nSLYPs~M~~~~~p~g~ 80 (388)
T d2py5a2 1 MTAGSDSLKGFKDIITTKKFKKVFPTLSLGLDKEVRYAYRGGFTWLNDRFKEKEIGEGMVFDVNSLYPAQMYSRLLPYGE 80 (388)
T ss_dssp SSHHHHHHHHHHHHHCHHHHHHHSCCCCHHHHHHHHTTCCCCCEEECGGGBTCEECSEEEEEETTHHHHHHHHSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCC
T ss_conf 96307899999999765146540888991477888971217623214544555668548986557239998337899776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T d2py5a2 81 PIVFEGKYVWDEDYPLHIQHIRCEFELKEGYIPTIQIKRSRFYKGNEYLKSSGGEIADLWLSNVDLELMKEHYDLYNVEY 160 (388)
T ss_dssp EEEEESSCCCCTTSCEEEEEEEEEEEECTTCCCCCCC-------CCSCCSBCTTSCEEEEEEHHHHHHHHHHEEEEEEEE
T ss_pred CEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEEE
T ss_conf 04653614666666770489999822765557766530344677865784668850567873899999995587258888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~f~~~~~~~k~~~~~~~~~kk~~~~~~q~~~KLl~NSlYGk~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d2py5a2 161 ISGLKFKATTGLFKDFIDKWTYIKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYT 240 (388)
T ss_dssp EEEEEEEEESCTTHHHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHTCCSBCCBEEEEECTTSSEEEEECCCCBCCCCCH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHEECCCCCCCCCEEECCCCCEEHHHHHCCCCCCCCCH
T ss_conf 76677212357899999842588774017799999974542441013335655434641443200121210001464431
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~ia~~ita~~r~~~~~~~~~~~~~v~Y~DTDSi~~~~~~~~~~~~~~~~~~~lg~~~~E~~~~~~~~~~~K~Y~~~~~~~ 320 (388)
T d2py5a2 241 PMGVFITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMK 320 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEETTEEEEESSSCCGGGGGGBCSSSTTSEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCHHHHCCCCCCCCCCHHHCCCCCHHHCEEECC
T ss_conf 48899998888889987641488379983636886577621567764245650546301010112116643201457424
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~v~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~d~~~~~~ 388 (388)
T d2py5a2 321 EVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPKPVQVPGGVVLVDDTFTIK 388 (388)
T ss_dssp EETTEEEECBTTBCSEEEEEEEETTCCHHHHTTCCTTTCSTTCEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHHHCHHHHEEECCEEEEECCCCCEECCCEEECC
T ss_conf 54332233442340152456455231699999987750502411656351177069826524402239
|
| >d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA polymerases {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29258.37 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~g~~ltr~~~d~~~g~~i~~~~~t~~G~~~v~v~~q~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~V~~v 80 (388)
T d1q8ia1 1 AQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGL 80 (388)
T ss_dssp CEEEEEEEEEEECCTTCBEEEEEEEETTEEEEEECSCBCEEEEEEGGGHHHHHHHTTTCCSEEEEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCEECCEEEECCCCCEEEEE
T ss_conf 98623630024771897799999985998879998799679999854567999998547781664322055789779999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 y~~~~~~~r~l~~~l~~~g~~vyEaDI~~~~RfliD~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~P~lkilsfDIE~~~ 160 (388)
T d1q8ia1 81 YCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTR 160 (388)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCBSTTCCHHHHHHHHTTCSSEEEEEEEEETTEEEEEEEEECTTCCCCCCEEEEEEEECT
T ss_pred EECCHHHHHHHHHHHHHCCCEEEECCCCHHHEEEEECCCCCCEEEEEECCCCEEECCEEEECCCCCCCCEEEEEEEEECC
T ss_conf 92899999999998862698589768996884899787888858998624661541067566788997359999999747
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~si~l~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~E~~LL~~F~~~i~~~dPDii~GyNi~~FDlpyL~~Ra~~~~ 240 (388)
T d1q8ia1 161 HGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 240 (388)
T ss_dssp TSCEEEEEEEETTEEEEEEESSCCSCCTTCSSEEEEESSHHHHHHHHHHHHHHHCCSEEEESSTTTTHHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 88667898548998889999567777787855999969999999999999987199889960788878899999999858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~~~lgr~~~~~~~~~~~~~~~~~~~~i~Gr~~lD~~~~~k~~~~~~~sy~L~~Va~~~Lg~~K~~~~~~~~~~~~~~~~ 320 (388)
T d1q8ia1 241 LPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRF 320 (388)
T ss_dssp CCCCCSSSSCCCEEEEECSSSCEEEEEBTTBEEEEHHHHHHHSCCCCSCCCHHHHHHTTC------------CTHHHHHH
T ss_pred CCCHHHHCCCCCEEEECCCCCCCEEEECCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
T ss_conf 87404424772205875655651133020499860268897563043546776755410024455557255589987157
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~d~~~l~~Y~~~D~~Lv~~L~~k~~~i~~~~ela~l~g~pl~~~g~s~~~~~~lll~~~~r~g~v~P 388 (388)
T d1q8ia1 321 AEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAP 388 (388)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCSCTTTTCCHHHHHHHHHHHHHHHTTBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCEECC
T ss_conf 12489999998999999999999877899999999884979899788499999999999997799587
|
| >d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29260.35 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~pGP~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT 80 (388)
T d1h0ca_ 1 HKLLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGH 80 (388)
T ss_dssp CCCSSCCCGGGGSCCCCCCCEECSSSCCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHH
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
T ss_conf 98767997676555688767212499988999999975768888789899999999999999996899983899869489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~a~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i 160 (388)
T d1h0ca_ 81 CALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVL 160 (388)
T ss_dssp HHHHHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCC
T ss_conf 99999999861268740231134301000012211111133333587655216899987616971137874200014445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
T d1h0ca_ 161 QPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLD 240 (388)
T ss_dssp CCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSCCSCSTTC
T ss_pred CCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC
T ss_conf 67999988764025441001112344332112345651220333321468972677750078887544304666432212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~ 320 (388)
T d1h0ca_ 241 IKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTT 320 (388)
T ss_dssp HHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEE
T ss_pred CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEE
T ss_conf 00023443210233443556657999988878999997166531000121047778777633753126887773880899
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~p~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~~ 388 (388)
T d1h0ca_ 321 VAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKK 388 (388)
T ss_dssp EECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC-
T ss_pred EECCCCCCHHHHHHHHHHCCCEEEECCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98899989999999998519989957852204998998477777999999999999999999862569
|
| >d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aromatic aminoacid aminotransferase, AroAT species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=29257.50 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~s~~~~~~~~s~ir~~~~~~~~~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~ 80 (388)
T d1gdea_ 1 ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNG 80 (388)
T ss_dssp CHHHHHHHSCCCHHHHHHHHHHHCTTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 95156410894689999999858998199999889998789999999999855764789985779999999999875133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (388)
T d1gdea_ 81 IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKT 160 (388)
T ss_dssp CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTE
T ss_pred CCCCCHHEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCC
T ss_conf 56787020431367535889999986589798998899848899999985998999514556687879999997375687
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 240 (388)
T d1gdea_ 161 RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWR 240 (388)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGC
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCHHHCCCCCCC
T ss_conf 59998999698888689999999999999869999997088655333677777656057788089995772433376361
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl 320 (388)
T d1gdea_ 241 LGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYI 320 (388)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEE
T ss_pred EEEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf 78997302102343211232223333220045789986032036899999999875334566653212566589833799
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~al~rL~~~l~e~k~~ 388 (388)
T d1gdea_ 321 FPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKERKLV 388 (388)
T ss_dssp CCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99888879999999999998599999810451989999799996499999999999999999961799
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=29256.11 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~p~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg 80 (388)
T d1erja_ 1 HYLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80 (388)
T ss_dssp CCCCCTTSSSCTTCCCCHHHHCCCSSSSCTTSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEE
T ss_pred CCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf 95687113244147999705765843475322468897089868877762054107607999968999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~ 160 (388)
T d1erja_ 81 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ 160 (388)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 49948999813640576631665443244321110146778988999988999801213444111121111111111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~ 240 (388)
T d1erja_ 161 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240 (388)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCC
T ss_conf 11111111011111111112221015654101111110000124544211236887875899738981999634557300
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 320 (388)
T d1erja_ 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320 (388)
T ss_dssp EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG
T ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCC
T ss_conf 01024433345778987899997999999999789928987515776432101344420011012455327899988999
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k~ 388 (388)
T d1erja_ 321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388 (388)
T ss_dssp CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEC
T ss_conf 99999969897999999999699999688997899998467425899999999918997999762149
|
| >d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Phormidium lapideum [TaxId: 32060]
Probab=100.00 E-value=0 Score=29255.81 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~~~~~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~ 80 (388)
T d1j32a_ 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKL 80 (388)
T ss_dssp CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 94523745399589999999999998779986899997899999899999999998558877899988999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~ 160 (388)
T d1j32a_ 81 QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI 160 (388)
T ss_dssp HHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHC
T ss_pred HHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 87316577885599868789999999999819989899928981879999998568599983153336678999999727
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 240 (388)
T d1j32a_ 161 TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYA 240 (388)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTT
T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 77874999889999877403535554432011237867972056531034677887888948522156057037705413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~g 320 (388)
T d1j32a_ 241 MTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDG 320 (388)
T ss_dssp CTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCB
T ss_pred CCHHHEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC
T ss_conf 60657599998899999998766521245668999887632445099999999999999999999998479978668993
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 g~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~al~rl~~~l~~l~ 388 (388)
T d1j32a_ 321 AFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGIL 388 (388)
T ss_dssp TTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 68999988887999999999999869999981643599996999983899999999999999999859
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=29254.61 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~S~~~RA~eL~~~I~~~~~d~G~~ 80 (388)
T d1ku0a_ 1 ASPRANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWDRACEAYAQLVGGTVDYGAA 80 (388)
T ss_dssp CCCCCCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSBCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98877999889818866677544676214678536468999858978998516986678999999999986345453376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTT 160 (388)
T d1ku0a_ 81 HAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTT 160 (388)
T ss_dssp HHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 77652302237567220003366786358604554587999999702356432222212344333223567750688885
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 IsTPH~GS~~AD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~l~~~~~es~~~~~~~~~~s~~~~~~~~a 240 (388)
T d1ku0a_ 161 IATPHDGTTLVNMVDFTDRFFDLQKAVLEAAAVASNAPYTSEIYDFKLDQWGLRREPGESFDHYFERLKRSPVWTSTDTA 240 (388)
T ss_dssp ESCCTTCCGGGGSTTHHHHHHHHHHHHHHHHHHHTTSCGGGCCCCCCBGGGTBCCCTTCCHHHHHHHHHTSHHHHSSSBH
T ss_pred CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
T ss_conf 05788986366542346652147889998876403542110002466653343457651099999988538876666401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~dLtt~g~~~fN~~~~~~p~v~Y~S~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NDGlV 320 (388)
T d1ku0a_ 241 RYDLSVPGAETLNRWVKASPNTYYLSFSTERTYRGALTGNYYPELGMNAFSAIVCAPFLGSYRNAALGIDSHWLGNDGIV 320 (388)
T ss_dssp HHHHSHHHHHHHHHHCCCCTTSEEEEEEECCEEECTTTCCEEECTTSCHHHHHHTHHHHTTCCBGGGTBCGGGCCBSSSS
T ss_pred HHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 03106599999733357899846777785143345777632224444454334557545553346532137679988865
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~v~S~~~g~~~~~~~~~~~~~~i~~G~W~~~~~~~~DHld~iG~~~~~~~~~~~~Y~~~a~~L~~l~~ 388 (388)
T d1ku0a_ 321 NTISMNGPKRGSNDRIVPYDGTLKKGVWNDMGTYNVDHLEVIGVDPNPSFNIRAFYLRLAEQLASLRP 388 (388)
T ss_dssp BGGGSSSCCTTCCCCEEECCSSCCBTSEEEEEEESCCTTGGGTSSCCTTSCHHHHHHHHHHHHHTCCC
T ss_pred CHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88557587056777543345654455011036547649997388987877999999999999843999
|
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=0 Score=29258.16 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~ 80 (388)
T d1x38a1 1 DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKA 80 (388)
T ss_dssp CCCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99876889999999999999877999999613064445688788985256616636876667898999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~ 160 (388)
T d1x38a1 81 CMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCY 160 (388)
T ss_dssp HHTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGG
T ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87436898836633655675235664210033311025897999999998657887448763367763534564446556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 et~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~ 240 (388)
T d1x38a1 161 ESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN 240 (388)
T ss_dssp GSSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 67667889999988653664110135430122223455674213314436886646740334530488899886145577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~ 320 (388)
T d1x38a1 241 AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNK 320 (388)
T ss_dssp HHHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCC
T ss_conf 77605651223422357756657999999998730599752424221023312356775789999998517881347853
Q ss_pred -------------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~i~~~~h~~~a~~aA~~S 388 (388)
T d1x38a1 321 YQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS 388 (388)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 89999999999985998999999999999999999489988877824544069999999999999639
|
| >d1zeea1 a.266.1.2 (A:6-392) Hypothetical protein SO4414 {Shewanella oneidensis [TaxId: 70863]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Indolic compounds 2,3-dioxygenase-like superfamily: Indolic compounds 2,3-dioxygenase-like family: Indoleamine 2,3-dioxygenase-like domain: Hypothetical protein SO4414 species: Shewanella oneidensis [TaxId: 70863]
Probab=100.00 E-value=0 Score=29192.13 Aligned_cols=1 Identities=0% Similarity=-1.291 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~d~wir~~f~~~n~~le~~y~~~~~~~~~~~~g~~~k~~l~~~g~~~i~~ll~egntdegf~~~f~llgnvg~ym 80 (387)
T d1zeea1 1 YNTEAFDEWIRSRFVELNSQLEQLYYQQTDRANVQEVGTELKHTLESEGRELVKALLDEGNTDEGFDSAFDLLGNVGLYM 80 (387)
T ss_dssp CHHHHHHHHHHTHHHHHHHHHHHHHHHSSSSSCCSSSCHHHHHHHHHHHHHHHHTTTTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 96678889999999998799999997477732342000899999999889999999966785231799999975158999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~acrrh~i~ep~re~~~p~~eas~la~~~~as~gv~prf~~~hl~~hn~a~~~~~k~ft~l~de~~f~~~nt~~~~a~~~ 160 (387)
T d1zeea1 81 AACRRHEITEPTRETTSPLLEASALAMHIGASIGVTPRFATAHLTTHNRAHNGIYKRFTDLPDEKLFVDYNTKGILAYKR 160 (387)
T ss_dssp HHHHHTTSSCTTTCSSCSCHHHHHHHHHHHHHHTSCSSCCHHHHTTTCCEETTEECCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99874267785301368414437999988886399923566666315665410676305883578999875799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~~l~~~~~lgi~hp~~~~ll~~~~~aLq~v~~sn~~l~~~ld~~~Ff~~vRPyykP~rVG~q~YrG~sAgqsa~I~vl 240 (387)
T d1zeea1 161 ASDALLKIQPLGISHPISHDLLRVTKQALQDVIESNQQLFNRLDTDRFFYCVRPYYKPYRVGSVVYRGANAGDFAGINVI 240 (387)
T ss_dssp HHHHHHTTTTTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHTGGGGCCEEETTEEECCCCTTCSHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCEEECCCCHHHCCCHHHH
T ss_conf 99998764287899754899999999999999999999998439999899856312543237751079971201008999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 D~LLGvcha~dP~ysqfL~dmr~YMPP~hra~L~d~~r~PSl~d~vLsa~~~~~~~~y~~nL~aflevC~~hg~afR~hH 320 (387)
T d1zeea1 241 DLTLGLCFANEASYSQMLVDKFLYMMPEDQQILRECMRRPNLMDDFLQAKGCIHQDWYQENLKLFIEVCELHGQTAIQHH 320 (387)
T ss_dssp HHHTTSSCTTSHHHHHHHHTTGGGSCHHHHHHHHHHTTSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99975563799409999999986179789999999863871689998635650038999999999999999999999999
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 lQlV~KYI~~pS~~~~~q~~~~lTaSGPpl~vLLk~LkKLRD~R~AA~r~Di~tr~~d~~~l~~~l~ 387 (387)
T d1zeea1 321 NELVTKYIAEPSVSMEQQHLAKVTASGPPLHVLLASLERLRDRRAAVLRDDIRTRYYDLKKLKDSLR 387 (387)
T ss_dssp HHHTSCC------------------------CCHHHHHHHHHHHTTCCCSSSCCTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999972887434266566447899807899999998665542031137763999999998609
|
| >d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Influenza neuraminidase species: Influenza A virus, different strains [TaxId: 11320]
Probab=100.00 E-value=0 Score=29191.11 Aligned_cols=1 Identities=0% Similarity=1.102 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 e~~n~t~plC~i~gfa~~sKDN~iR~g~~g~i~V~REPyVSC~p~eCr~FaL~QGa~l~~kHsNGTi~DRsp~R~L~s~~ 80 (387)
T d2aepa1 1 EYRNWSKPQCKITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNRHSNDTVHDRTPYRTLLMNE 80 (387)
T ss_dssp CCCCCCSCBCCCSEEEEEEECCHHHHHTTSCCEEEEEEEEEECSSCEEEEEEEEEEESSSGGGTTCCCSCCTTCEEEEEE
T ss_pred CCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHEEEECC
T ss_conf 95546676675343046763662575378866998266020284401357631321027866688426654101035513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 lG~P~~~~s~~~~vaWSsssCHDGk~wl~I~vtG~D~nA~A~i~Y~g~~tdti~SW~~nILRTQESeCvCinG~C~vvmT 160 (387)
T d2aepa1 81 LGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCVTGHDENATASFIYDGRLVDSIGSWSKKILRTQESECVCINGTCTVVMT 160 (387)
T ss_dssp TTCCCCTTCEEEEECSEEEEEECSSCEEEEEEESCTTSCEEEEEETTEEEEEEECSSSSCCBCCSSCCEEETTEEEEEEE
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEHHHHHHHHHCCCCCCCEEEECCEEEEEEE
T ss_conf 67997558657899863243468862489987768888089999899985326544430120042204898998899992
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 DG~A~~~A~~ri~~i~eGkIik~~~l~g~~~HiEECSCYp~~~~V~CvCRDNW~GsNRP~v~in~~~~~~~~~YvCsg~~ 240 (387)
T d2aepa1 161 DGSASGRADTKILFIEEGKIVHISPLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINVKDYSIVSSYVCSGLV 240 (387)
T ss_dssp EECSSSCEEEEEEEEETTEEEEEEECCSSCCCCEEEEEEEETTEEEEEEECCSSCSSCEEEEECTTTCCEEEEECCCSSC
T ss_pred CCCCCCCCEEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCHHCEEEEEEEECCCC
T ss_conf 68878853068999845638877606888673276330379982699970688877897499540022045305753644
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~DTpRp~D~s~~g~C~~p~~~~G~~GVKGf~F~~Gn~vW~GRTiS~~sRsGfE~~~v~~gwt~~~Sk~~~~~q~iV~n~n 320 (387)
T d2aepa1 241 GDTPRKNDSSSSSHCLNPNNEEGGHGVKGWAFDDGNDVWMGRTISEKFRSGYETFKVIEGWSKPNSKLQINRQVIVDRGN 320 (387)
T ss_dssp CCSSCCCTTTCCCCSSSCCCSSCSSCCCCCEEEETTEEEEEECSSSSSSEEEEEEEETTTTTSTTCCCEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
T ss_conf 78999888776655658888888886163368658973876532376677616999458875878634111479995588
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 wSGYSGsF~~~~k~C~~pCF~VElIRGrp~E~~v~WTS~S~v~fCG~~~~~~~~swpDGA~i~~mp~ 387 (387)
T d2aepa1 321 RSGYSGIFSVEGKSCINRCFYVELIRGRKQETEVWWTSNSIVVFCGTSGTYGTGSWPDGADINLMPI 387 (387)
T ss_dssp ECCCEEEEEEECSSSEEEEEEEEEEEETTTCTTSSCEEEEEEEEEEESSCCCCCCCCCCCCGGGSCC
T ss_pred CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7752257996899842002899996078764505785187799936789867866899766676669
|
| >d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpB, AAA+ modules species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29188.28 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~l~~~~~~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~ 80 (387)
T d1qvra2 1 TYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 80 (387)
T ss_dssp CCSHHHHHEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCE
T ss_conf 93779999798899998599998748089999999998248899976879999889999999999998089997886966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~ 160 (387)
T d1qvra2 81 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTL 160 (387)
T ss_dssp EEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTCCCEEEEECH
T ss_pred EEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCH
T ss_conf 89955766652667413689999999998505899669872408888427778774138999999973788516663689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidlld~a 240 (387)
T d1qvra2 161 DEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEA 240 (387)
T ss_dssp HHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99987633679998246112799867889999999999987404774669999999985023666566704688999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~a~~~i~~~s~P~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~~ek~~l~~i~~Lk~ 320 (387)
T d1qvra2 241 AARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQH 320 (387)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998641589588999999999999999998740145788887653323567999999999999888879999999999
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Le~lr~~le~A~r~gd~e~AaeL~y~~ip~le~el~~l~~~~~~~~lvr~~VteedIA~VVSrWTG 387 (387)
T d1qvra2 321 RLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTG 387 (387)
T ss_dssp HHHHHHHHHHHHTTTTCHHHHHHHHTTHHHHHHHHHHHHHHHSSSCSSCCSEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 9999999999999764688788875250799999999999873579877686398999999976109
|
| >d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Myotubularin-like phosphatases domain: Myotubularin-related protein 2, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29184.70 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~edGW~~yd~~~E~~RlGl~~~~WRiS~iN~~Y~lC~SYP~~lVVP~~isD~~l~~~a~fr~~~R~Pvl~w~~~~~~ 80 (387)
T d1zsqa2 1 EVFPENGWKLYDPLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQ 80 (387)
T ss_dssp CCCSSCGGGSCCHHHHHHHTTCSCSSEEEECTTTTSSSCTTSCSSEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTC
T ss_pred CCCCCCCHHHCCHHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 98788763235889999863899888788542699704588998169828589999999987636997607988759998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~L~RssqP~~g~~~~r~~ede~~l~~i~~~~~~~~~~~I~D~Rp~~na~an~~~ggG~E~~~~Y~~~~~~f~~i~nih~ 160 (387)
T d1zsqa2 81 ATITRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHV 160 (387)
T ss_dssp CEEEEECCBCCTTTTCCCHHHHHHHHHHHHHSSSCSSEEEEECSCHHHHHHHHHHTCCCCCTTTCTTEEEEECCCCCHHH
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCCCCCCHHCCCCCEEEEECCCCHHH
T ss_conf 36885178577756787689999999999737776753555477414688752248986552105675245304665278
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 vr~s~~kl~~~~~~~~~~~~~~s~le~s~WL~~i~~~L~~A~~ia~~l~~~~~sVlVh~sdGwD~T~qvsSL~ql~lDpy 240 (387)
T d1zsqa2 161 MRESLRKLKEIVYPNIEETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGY 240 (387)
T ss_dssp HHHHHHHHHHHHSSCCCGGGHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999999998558875466775243444499999999999999999970897399857888752489999999973832
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 yRTi~GF~~LIekewi~~Gh~F~~R~~h~~~~~~~~e~sPvFl~FLDcV~ql~~q~P~~FEF~e~~L~~l~~h~~s~~fg 320 (387)
T d1zsqa2 241 YRTIRGFEVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFG 320 (387)
T ss_dssp GGSHHHHHHHHHHHTTTTTCCHHHHHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 11188899999988873378632342678777566777985699999999998749740112799999999986026646
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 tFl~n~e~eR~~~~~~~~t~Slw~~~~~~~~~f~N~~Y~~~~~~~l~P~~~~~~~~~W~~~ylR~~p 387 (387)
T d1zsqa2 321 TFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNP 387 (387)
T ss_dssp TTCSSSHHHHHHTTHHHHSCCHHHHHHTCGGGGBCTTTTSCSSSCCCCCCSTTTCCCCHHHHTCSCC
T ss_pred CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEHHHHCCCCCC
T ss_conf 4555899999871768787369999987599855978788999857033675667426753335587
|
| >d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Acetylornithine/acetyl-lysine aminotransferase ArgD species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29182.50 Aligned_cols=1 Identities=0% Similarity=-1.060 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
=
T Consensus 1 ~~~~~~~~~~~~~~~y~~~p~~i~ra~G~~l~d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~ 80 (387)
T d1vefa1 1 WRALLEAEKTLDSGVYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPM 80 (387)
T ss_dssp CHHHHHHHHHHBCSCSCCCSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 96688606531489878898318984749999798799998464187665528969999999999976364666557705
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~ 160 (387)
T d1vefa1 81 RGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVE 160 (387)
T ss_dssp HHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEE
T ss_pred HHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCE
T ss_conf 99999876530232101111246726799999999876113312325656889996123863478655678878899826
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~p~~d~~~l~~~~~~~iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PD 240 (387)
T d1vefa1 161 FIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD 240 (387)
T ss_dssp EECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS
T ss_pred EECCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86889799999756897479999787788888649989999999999976926984002224674677765446783776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~~~gK~l~gG~~~~~~~~~~~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~ 320 (387)
T d1vefa1 241 ILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPK 320 (387)
T ss_dssp EEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTT
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 33313257887666332221023102236883553799863001011200010333222057665078999998617984
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
+
T Consensus 321 v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~g~l~~~~g~~~ir~~Ppl~it~~~ld~~~~~i~~aLS 387 (387)
T d1vefa1 321 IREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA 387 (387)
T ss_dssp EEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 5788521469999982774699999999789759933899899979713999999999999999859
|
| >d1bxba_ c.1.15.3 (A:) D-xylose isomerase {Thermus aquaticus, subsp. Thermophilus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Thermus aquaticus, subsp. Thermophilus [TaxId: 271]
Probab=100.00 E-value=0 Score=29181.79 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~p~~~~~f~~~~W~~~~~g~dpfg~~~~~~~~~~~~~~~~~~lg~~~~~fHd~d~~p~~~~~~e~~~~~~~~k~~~~~ 80 (387)
T d1bxba_ 1 MYEPKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDE 80 (387)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99998766147997235787889988543112788999999984499878516665588899878999999999998641
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Gl~~~~~t~nlf~~~~~~~Gs~t~pD~~vR~~Ai~~~k~~id~a~~LGa~~~vlW~G~dG~~~~~~~d~~~~~~~~~e~ 160 (387)
T d1bxba_ 81 TGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREA 160 (387)
T ss_dssp HTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHH
T ss_pred CCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 68721122454355623324764689889999999999999999998499979975787766776306799999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~v~~~a~~~g~~~~i~iEpkP~EP~~~~~~~~~~~~l~~~~~~g~~~~~gl~lD~~H~~l~g~~~~~~v~~a~~~gkL 240 (387)
T d1bxba_ 161 LNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNFVHAVAQALDAGKL 240 (387)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCHHHHCCCCHHHHHHHHHHHCCE
T ss_conf 99999977750788379995168988544214889999999998377020754123044530487668899999983964
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~vh~Nd~~~~~~D~DL~~g~~~~~~~~~~~~~L~~~gy~G~~~fD~~~~r~~~~~~l~~~~~~~m~~~a~ll~~a~~l~ 320 (387)
T d1bxba_ 241 FHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYLILKERAEAFR 320 (387)
T ss_dssp CCEECCBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHTTCCSCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 15574777777887666888621889999999998458876433134567788500689999999999999999999988
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~d~~~~~~l~ary~~~~a~~~~~~~~~~~~~~~l~~~~~~~~a~~~~s~~qE~Le~l~n~~i~g~~~ 387 (387)
T d1bxba_ 321 EDPEVKELLAAYYQEDPAALALLGPYSREKAEALKRAELPLEAKRRRGYALERLDQLAVEYLLGVRG 387 (387)
T ss_dssp TCHHHHHHHHHHTCCCHHHHTTSSSCCSHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHTTCCC
T ss_pred HCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 6768999999987212442201100145679984476678431432672499999999999862369
|
| >d2ex0a1 c.87.1.9 (A:26-412) Alpha-2,3/2,6-sialyltransferase/sialidase {Pasteurella multocida [TaxId: 747]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Sialyltransferase-like domain: Alpha-2,3/2,6-sialyltransferase/sialidase species: Pasteurella multocida [TaxId: 747]
Probab=100.00 E-value=0 Score=29187.12 Aligned_cols=1 Identities=0% Similarity=0.636 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ktlEvYvD~AsLPslqqlm~iiq~ne~~~n~rli~w~R~~i~d~~l~~~~n~~F~~~~~n~~~~~~~~il~~~~~~~~in 80 (387)
T d2ex0a1 1 KTITLYLDPASLPALNQLMDFTQNNEDKTHPRIFGLSRFKIPDNIITQYQNIHFVELKDNRPTEALFTILDQYPGNIELN 80 (387)
T ss_dssp EEEEEEEESSSHHHHHHHHHHHHTTTCSSSCEEEEETTCCCCHHHHTTCSSEEECCEETTEECTHHHHHHTTCCSCEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 95699954355615999999986046778821577742368778987301021354457895299999997174433799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~~Nt~hS~d~~~~I~~~~~~~~~kv~i~~L~lYDDGSaEYV~l~~~k~~d~~~~~~~~~~~l~~~l~~Gt~~~~n~~~~ 160 (387)
T d2ex0a1 81 IHLNIAHSVQLIRPILAYRFKHLDRVSIQQLNLYDDGSMEYVDLEKEENKDISAEIKQAEKQLSHYLLTGKIKFDNPTIA 160 (387)
T ss_dssp EEEESTTHHHHHHHHHHHHHHTTTTEEEEEEEEECCSHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHCCCCCSCHHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 82121767776899999998740573048887752885888667764133034445678899988876387778985101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Y~w~qlypt~YH~Lr~Dyf~~~~~L~~Lk~yL~~n~kqM~Wd~f~~fn~~Qk~lf~~~vgf~~E~~qq~~~q~~nFiFt 240 (387)
T d2ex0a1 161 RYVWQSAFPVKYHFLSTDYFEKAEFLQPLKEYLAENYQKMDWTAYQQLTPEQQAFYLTLVGFNDEVKQSLEVQQAKFIFT 240 (387)
T ss_dssp TTCGGGTSCEEEEESCHHHHHHCGGGHHHHHHHGGGEEECCSCHHHHSCHHHHHHHHHHHTCCHHHHHHTCCSSEEEEEE
T ss_pred EEEHHHCCCCHHHHEEHHHHHCCCCCHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEE
T ss_conf 33044406743431105565057452479999840333467523200698888899987179899999997267875997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 GTts~~~~~e~~eyyaqqQInvin~a~ne~s~~~~g~~ydLfFKGHP~~~~~N~~I~~~~~~mi~IpakIpFEvLmMTg~ 320 (387)
T d2ex0a1 241 GTTTWEGNTDVREYYAQQQLNLLNHFTQAEGDLFIGDHYKIYFKGHPRGGEINDYILNNAKNITNIPANISFEVLMMTGL 320 (387)
T ss_dssp CCCCCCSSCCCHHHHHHHHHHHHHHHHSTTSTTCCCTTEEEEEECCTTCTHHHHHHHHHSSSCEECCTTSCHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCHHHHHHCCC
T ss_conf 13455676306778899989998732388996530675115772699865056899743355522644586299987278
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 LPd~VGG~aSSlyFsiP~e~in~ivFtss~~~~s~~d~~~~~lvqVM~~L~iv~~~~V~fw~~~k~~ 387 (387)
T d2ex0a1 321 LPDKVGGVASSLYFSLPKEKISHIIFTSNKQVKSKEDALNNPYVKVMRRLGIIDESQVIFWDSLKQL 387 (387)
T ss_dssp CCSEEEEECCGGGGGSCGGGEEEEEECCCSSCSSHHHHHTSHHHHHHHHTTSCCGGGEEEGGGSCCC
T ss_pred CCHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHCCCCHHHEEEHHHHHCC
T ss_conf 8054336000258975533124899933764256565653839999999777766763676753039
|
| >d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: beta-secretase (memapsin) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29179.13 Aligned_cols=1 Identities=0% Similarity=-1.656 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~l~~~~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~~c~~~~~~f~~~~SsT~~~~~~~~~i~Y~~g~~~G 80 (387)
T d2qp8a1 1 FVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 80 (387)
T ss_dssp CTTTTTCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred CCCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEE
T ss_conf 92133025589999899999988999799999989961048926898767881583028871757981899968960999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~D~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~~~~~~~~fs~~l~~~~ 160 (387)
T d2qp8a1 81 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAG 160 (387)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCS
T ss_pred EEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 99999999847773367478999982477621134556622334564435788778537888626574215767632455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~~~~~aiiDSGts~i~lp~ 240 (387)
T d2qp8a1 161 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 240 (387)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCEECCCCCCCCCCCCEEEECCCCEEECCH
T ss_conf 44456644457784467456233334573586314543336899879999999656654567764169816997086889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~fp~~~~~~~~~~~~~~~~~~i~p~~y~~~~~~~~~~~~~ 320 (387)
T d2qp8a1 241 KVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDD 320 (387)
T ss_dssp HHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHEEECCCCCCCCCE
T ss_conf 99999999856001465567754453156410038986421340578866621233079998879911551356786766
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 c~~~~~~~~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (387)
T d2qp8a1 321 CYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGYN 387 (387)
T ss_dssp EEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEEEEEEECCCGGGGSCC
T ss_pred EEEEEECCCCCCEEEHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 8998707999977970894286899998999999999778687788131256798888984652789
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=100.00 E-value=0 Score=29179.01 Aligned_cols=1 Identities=0% Similarity=-1.358 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~p~~g~W~~~~~~p~~~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~ 80 (387)
T d1k3ia3 1 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPG 80 (387)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEE
T ss_conf 98788978716786889861017899925999999984057666788776068999988889686667789874452568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~ 160 (387)
T d1k3ia3 81 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 160 (387)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCEE
T ss_conf 99946886898636888621675675574421565664210130355317826652136633354320566348889551
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (387)
T d1k3ia3 161 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 240 (387)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred ECCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCEEEECCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 15887644311346651365042269997079877874686774781486667173166556676657632226378861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~ 320 (387)
T d1k3ia3 241 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 320 (387)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEE
T ss_conf 35882478875367887752100000111113567884060366566543433566058749998884567668899470
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~~~~~~~~e~y~Ppyl~~~~ 387 (387)
T d1k3ia3 321 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSN 387 (387)
T ss_dssp CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGGBCTT
T ss_pred CEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHCCCCC
T ss_conf 1079897999918878899975531279999889999999698767888661148998260405898
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=100.00 E-value=0 Score=29181.35 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~f~~g~d~s~~~~~e~~g~~~~~~~g~~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~ 80 (387)
T d1ur4a_ 1 GLYVEKVSGLRKDFIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEK 80 (387)
T ss_dssp CCCCCCCTTCCTTCEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHH
T ss_pred CCCCCCCCCCCHHCEEEEECHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 95223578998100777861068999867977889999710599999983998799404447743335767776242999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~ 160 (387)
T d1ur4a_ 81 AIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGL 160 (387)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCB
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 99999999987997999867787776877777850321322047999999999999998863699812799724888674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~~~~~~~~~l~~ 240 (387)
T d1ur4a_ 161 AGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTS 240 (387)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHH
T ss_conf 67688999999999999998730887527872267653277889999998659876400202312347608999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~~~~~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWep~w~~~~~~ 320 (387)
T d1ur4a_ 241 VADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVGPA 320 (387)
T ss_dssp HHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCCSSCG
T ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
T ss_conf 99983996389985044347786444765787633356777899999999999999985478805999735763136777
Q ss_pred ------------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~w~n~aLFd~~g~~l~~l~~f~~~~~~~~~ 387 (387)
T d1ur4a_ 321 HRLEKNKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLHVFQYVDTGTPF 387 (387)
T ss_dssp GGHHHHHHHHHHHCCSSBCGGGTTTCTTTHHHHCBSCSCGGGCSBCTTSCBCGGGGHHHHHHHCCC-
T ss_pred CCCCCCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf 6543450345412642032213324641123456777411210335589867577877413478999
|
| >d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Tryptophan synthase, beta-subunit species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=29104.54 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~pe~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS 80 (386)
T d1v8za1 1 MWFGEFGGQYVPETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGA 80 (386)
T ss_dssp CEETTEECCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSB
T ss_pred CCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 97678098848788899999999999999639899999999987338999855173766876289739999666877877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~KdR~a~~~i~~a~~~G~~~~v~~~s~Gn~g~a~A~aaa~~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~ 160 (386)
T d1v8za1 81 HKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRT 160 (386)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 64168999999876528831675225226999999999976986430344115544179999998649827994687430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~ 240 (386)
T d1v8za1 161 LKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV 240 (386)
T ss_dssp HHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 88889989999986056654214544574336133310013544537888998628989889977887178899998764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~v~iigvep~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v 320 (386)
T d1v8za1 241 NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYV 320 (386)
T ss_dssp TCTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEE
T ss_pred HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
T ss_conf 23670599970576643355532000357655551021001068777603443222221245530577888754854999
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~VtD~E~~~a~~~La~~EGI~~~~~sa~alA~a~kla~~~~~~~~VV~iltG~G~kD~~~~~~~~g 386 (386)
T d1v8za1 321 TVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDIVLKVSG 386 (386)
T ss_dssp EEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTSCTTCEEEEEECBBSGGGHHHHHHHHC
T ss_pred EECHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCC
T ss_conf 989999999999999965993566799999999998787199897999968885212999998539
|
| >d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Tryptophanyl-tRNA synthetase (TrpRS) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29104.29 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~pw~v~~~~~~~~dy~kl~~~fg~~~~~~~~~~~~~~~~~~~~h~~~rRg~~f~hrd~~~il~~~~~gkp~~vytG 80 (386)
T d1r6ta2 1 EDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFFSHRDMNQVLDAYENKKPFYLYTG 80 (386)
T ss_dssp CCEESSSCEECSCTTCCCHHHHHHHHTCEECCHHHHHHHHHHHCSCCCHHHHTTSEEEEESHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEC
T ss_conf 98438660668876666699999984888688899999997536886154533604422679999999974998589945
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~PSg~~lHlGh~v~~~~~~~~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~kt~i~~~s~~~ 160 (386)
T d1r6ta2 81 RGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYM 160 (386)
T ss_dssp ECCCTTCCBGGGHHHHHHHHHHHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTSEEEEEHHHHG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 17998402899999999999999721324489932517640456999999999999999999817895002899684799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~l~~~~~~~~~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~lvpvG~DQ~~h~~ltR 240 (386)
T d1r6ta2 161 GMSSGFYKNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYFRMTR 240 (386)
T ss_dssp GGCTTHHHHHHHHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98899999999998756514888864335677676531279889999983470542255665420110262899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 Dia~r~~~~~p~~l~~~~lpgL~G~~~KMSsS~~~s~I~l~D~~~~i~~KI~~~~~~~~~~~~~e~~~~~g~~~~~v~~~ 320 (386)
T d1r6ta2 241 DVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFM 320 (386)
T ss_dssp HHGGGGTCCCCEEEEECCCEETTEEEEECCTTSTTCCCBTTCCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHH
T ss_pred HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99998278886221144556778743445567777434635988899997661143168765446000389841317999
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~f~~d~~~~eel~~~y~~G~l~~gd~K~~lae~l~~~l~~~rekr~~~~~~~v~~~l~~~kl~ 386 (386)
T d1r6ta2 321 YLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEIVKEFMTPRKLA 386 (386)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTSCCCCC
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999986987589999999976999989999999999999978999999998888999985546799
|
| >d1muwa_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces olivochromogenes [TaxId: 1963]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: Xylose isomerase domain: D-xylose isomerase species: Streptomyces olivochromogenes [TaxId: 1963]
Probab=100.00 E-value=0 Score=29103.08 Aligned_cols=1 Identities=100% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~p~~~~rF~~~~Wt~~~~g~dpFG~~tr~~~~~~d~~~~~~~lG~~~~~fHd~D~~P~~~~~~e~~~~~~~i~~~l~~ 80 (386)
T d1muwa_ 1 SYQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDA 80 (386)
T ss_dssp CCCCCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99898445335886205765879999888999898999999998599879747775688899867889999999999985
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Gl~~~~~t~nlf~~p~~~~Ga~tspD~~vR~~Ai~~~k~aiDia~~LGa~~vv~W~G~~G~~~~~~~d~~~~~~~l~e~ 160 (386)
T d1muwa_ 81 TGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEA 160 (386)
T ss_dssp HTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 29701134156410200113787792999999999999999999998399848984787755677667999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~v~dya~~~g~~v~~~IEpkP~EP~~~~~~~t~~~al~~l~~~g~~~~~glnlD~gHa~~ag~~~~~~ia~a~~~grL 240 (386)
T d1muwa_ 161 FDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKL 240 (386)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCE
T ss_conf 99999999972999369982057887553310769999999997299531346644465330477715899999873867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~vhlNd~~~~~~D~DL~fG~~~~~~~~~~~~~L~~~Gy~G~~~FD~k~~R~~~~~~~~~~~~~~m~~~a~~~~~a~~~~ 320 (386)
T d1muwa_ 241 FHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLESAGYEGPRHFDFKPPRTEDIDGVWASAAGCMRNYLILKERAAAFR 320 (386)
T ss_dssp CCCEECBCCSSSSCCCBCTTSSSHHHHHHHHHHHHHHTCCSCEEECCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34211533477743456676401789999999999559988330540367788766799999999999999999999865
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~d~~~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~e~Le~l~~~~l~g~r 386 (386)
T d1muwa_ 321 ADPEVQEALRASRLDELAQPTAADGVQELLADRTAFEDFDVDAAAARGMAFERLDQLAMDHLLGAR 386 (386)
T ss_dssp HCHHHHHHHHHTTHHHHTSCSCTTCHHHHHHCGGGTTTCCHHHHHHSCCCHHHHHHHHHHHHHTCC
T ss_pred HCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 499999999986554113544445256677776520013813343255029999999999971379
|
| >d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 7, HDAC7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=29102.63 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~Tg~vyd~~~l~H~~~~g~~~~HPE~p~Rl~~i~~~L~~~gl~~~~~~~~p~~a~~~~L~~vH~~~YI~~l~~~~~ 80 (386)
T d3c10a1 1 TLPFTTGLIYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPL 80 (386)
T ss_dssp CCTTCEEEECCGGGGGCCCTTCCGGGCSSCTHHHHHHHHHHHHTTCGGGSEEECCCCCCHHHHTTTSCHHHHHHHHCCTT
T ss_pred CCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCHH
T ss_conf 99887799977788557899999899897989999999999966996578376789899999988299999999862605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~dt~~~~~~s~~Aa~~aaG~~~~a~~~v~~~~~~~afa~~rppGHHA~~~ 160 (386)
T d3c10a1 81 SRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHS 160 (386)
T ss_dssp CSCCCCHHHHHHHHHC---CBCTTSCEESSSSCEECTTTHHHHHHHHHHHHHHHHHHHHTTSSSEEEECCSSCCTTCBTT
T ss_pred HHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 43112233321034555420367777666888645761089999998457888776542376544441244323545655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~GFC~fNdvAiaa~~l~~~~~~~rV~iiD~DvHhGnGTq~if~~~~~V~~~SiH~~~~~~~~p~tG~~~e~G~g~g~g 240 (386)
T d3c10a1 161 TAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEG 240 (386)
T ss_dssp BCBTTBSSCHHHHHHHHHHHHSTTCCEEEEECSSSCCHHHHHHHTTCTTEEEEEEEECTTTTSTTCCCCTTCCCCGGGTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66873433288999999986214677437742467887604676425543354333566545678889887638877766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~n~pl~~~l~~~~~d~~yl~~~~~~l~~~~~~f~PdlIvvsaG~D~~~~D~~pLg~l~lt~~~~~~~~~~l~~~~~~~ 320 (386)
T d3c10a1 241 FNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGA 320 (386)
T ss_dssp CEEEEEECSCSSSCCBHHHHHHHHHHTHHHHHHHHCCSEEEEEECCTTBTTCCGGGCCCBBCHHHHHHHHHHHTTSGGGC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 64456410136799983999999999999999866998899968825334675356367558999999999999873998
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 vv~vleGGY~~~~l~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~w~~~~~ 386 (386)
T d3c10a1 321 VVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQR 386 (386)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHHHHTCCCCGGGCSGGGSCCCHHHHHHHHHHHHHHTTTCGGGCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 799968888865899999999999838999987841013588888999999999999886076329
|
| >d1v5da_ a.102.1.2 (A:) Chitosanase {Bacillus sp., strain k17 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Chitosanase species: Bacillus sp., strain k17 [TaxId: 1409]
Probab=100.00 E-value=0 Score=29101.56 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~pfp~~~~y~~~~~~~~~~q~~~~~~~~~~y~~wk~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~t~SEGqgYGM 80 (386)
T d1v5da_ 1 AKEMKPFPQQVNYAGVIKPNHVTQESLNASVRSYYDNWKKKYLKNDLSSLPGGYYVKGEITGDADGFKPLGTSEGQGYGM 80 (386)
T ss_dssp CCCSSCSCCCCCCTTCCCCCSSCHHHHHHHHHHHHHHHHHHHEECCCTTSTTCCEECCCCCCCBTTBCCCEEHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHH
T ss_conf 98788898753536774888667899999999999999999853367777764001465556788898753005888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~Av~~~~~~~nd~~~Fd~lw~wt~~~l~~~~~~L~aW~~~~~~~~v~d~nsAtDgDl~iA~ALl~A~~~Wg~~~~~~Y~ 160 (386)
T d1v5da_ 81 IITVLMAGYDSNAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYL 160 (386)
T ss_dssp HHHHHTBTTBTTHHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHH
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99998476775619999999999999860679998668857999877799988768999999999999774885178999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~A~~ii~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~~~~fa~~~~d~~W~~v~~~~~~ll~~~~~~~~~~tG 240 (386)
T d1v5da_ 161 KEAQDMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTG 240 (386)
T ss_dssp HHHHHHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999998750578887426888788898755831054999999997458972999999999999998763188768
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 L~PDw~~~~~~~~~~~~~~~~~~~~~~~~ydA~Rvpl~la~d~~w~g~~~a~~~~~~~~~f~~~~~~~~~~~i~~~y~l~ 320 (386)
T d1v5da_ 241 LISDFVVKNPPQPAPKDFLDESEYTNAYYYNASRVPLRIVMDYAMYGEKRSKVISDKVSSWIQNKTNGNPSKIVDGYQLN 320 (386)
T ss_dssp CCCSSEETTTTEECCTTGGGSCTTTTSBCTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTCGGGCCSCBCTT
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99631212786767765677777888724119999999998886427804789999999999986147976556632147
Q ss_pred -----------------------------------------------------------------C
Q ss_conf -----------------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 G~~~~~~~~~~~~a~~~~aa~~~~~~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~lsGn~~~p~p 386 (386)
T d1v5da_ 321 GSNIGSYPTAVFVSPFIAASITSSNNQKWVNSGWDWMKNKRERYFSDSYNLLTMLFITGNWWKPVP 386 (386)
T ss_dssp SCBCCCSCCHHHHHHHHHTTTTCGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCSCCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 742688875899999999862873169999998733357778857999999999997388888998
|
| >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Klebsiella aerogenes [TaxId: 28451]
Probab=100.00 E-value=0 Score=29038.03 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 GiDtHvHfi~Pqq~~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~~~~ml~a~d~~P~N~g~~gkGn~s~~~~l~eqi 80 (385)
T d1ejxc2 1 GIDTHIHWICPQQAEEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQPDALREQV 80 (385)
T ss_dssp EEEEEEECSCTTHHHHHHHTTEEEEEEECCSSSHHHHHSSCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSSHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 95545334488789999866973663686688877777573888899999998655078331052116669868999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~AGa~GlKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE~gfvedT~~a~~gRtiH~~H~EGaGGGHAPDii~~~~ 160 (385)
T d1ejxc2 81 AAGVIGLKIHEDWGATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACA 160 (385)
T ss_dssp HHTCSEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEESSTTSTTSSSTTTGGGGGG
T ss_pred HHHHCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHC
T ss_conf 71132144775235675899999876754183589760535400200214887579730332025677786631567624
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~nvlpsSTnPT~P~t~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTiaAEdvLhD~GaiSi~sSDsQaMGRvGE 240 (385)
T d1ejxc2 161 HPNILPSSTNPTLPYTLNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGRVGE 240 (385)
T ss_dssp CTTEEEEEESTTSSCBTTHHHHHHHHHHHC----------CHHHHHHSCHHHHHHHHHHHHTTSSCEEECCTTSSSCTTC
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
T ss_conf 68535789998878866736764772332046898875677664233530123267776345743442153332576774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 vi~RtwqtA~kmk~~rG~l~~d~~~~DN~RvkRYIAKYTINPAIahGIsh~VGMFGA~G~A~~~tSvtFVSqaAid~gi~ 320 (385)
T d1ejxc2 241 VILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVGMFGALGSARHHCRLTFLSQAAAANGVA 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHHHHTHHHHHHTTCTTTSSCGGGSHHHHHHHCEEEECHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCEECCCCCCCCCCCCCCEEEECHHHHHCCCH
T ss_conf 11020787999987603687777777624777666662368188768455135323456555457138856888867684
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~LgL~K~lvpVkn~R~ItK~DM~~Nda~P~IeVDPeTYeV~aDGelltcePA~~LPLAQRYFLF 385 (385)
T d1ejxc2 321 ERLNLRSAIAVVKGCRTVQKADMVHNSLQPNITVDAQTYEVRVDGELITSEPADVLPMAQRYFLF 385 (385)
T ss_dssp HHTTCCSEEEECCCTTTCCGGGSTTCCCCCCEEECTTTCCEEETTEECCCCCBSSCSSSTTTCCC
T ss_pred HHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEECCCCEEEEECCEECCCCCCCCCCCHHCCCCC
T ss_conf 77388760686148887787786015789982789997689989999046765667631110176
|
| >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Lactaldehyde reductase FucO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29031.54 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~~~~~~~~~~fG~g~l~~l~~~l~~~G~k~~Livt~~~~~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p~~~~v~~~~ 80 (385)
T d1rrma_ 1 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 80 (385)
T ss_dssp CCEEEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred CCCEEECCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf 99526669972798689999999999769997999989655658089999999987598599986826997989999886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse~t~~avi~~~~~~~ 160 (385)
T d1rrma_ 81 GVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR 160 (385)
T ss_dssp HHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTCSEEEEEETTTTE
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 54303588889866988422699999999638753026665043222478774674366544643234442224444331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 K~~~~~~~~~P~~~i~Dp~l~~~~P~~~~a~~g~Dal~h~~E~~~s~~~~p~~~~~a~~a~~~~~~~l~~~~~~~~~~~~ 240 (385)
T d1rrma_ 161 KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGE 240 (385)
T ss_dssp EEEEECGGGCCSEEEECGGGTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred EEEEEEEECCCCCCCCHHHHHCCCCHHEEEECHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 01355420135322006777327980126400364664112111113320001277899999999752432000056899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~a~~~ag~~~~~~~~g~~hai~~~l~~~~~i~HG~a~ai~lp~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 320 (385)
T d1rrma_ 241 EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARN 320 (385)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGSTTHHHHHHHHTTCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999999976651676400053203200233457510001436889987335269999999998388656999899999
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~i~~i~~~~~~lglP~~L~d~Gv~~~~l~~ia~~a~~~~~~~~nP~~~t~~di~~il~~a~~g~ 385 (385)
T d1rrma_ 321 AAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAWEGG 385 (385)
T ss_dssp HHHHHHHHHHHHTTCCSSGGGGTCCGGGHHHHHHHHHTCGGGGGCSSCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999999859999988829899999999999985720059994389999999999997489
|
| >d1xmxa_ c.52.1.26 (A:) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Restriction endonuclease-like superfamily: Restriction endonuclease-like family: Hypothetical protein VC1899 domain: Hypothetical protein VC1899 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=29030.09 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~m~~hv~~i~~~~~~n~~p~l~~~~~p~~~v~i~t~~~~~~~e~L~~~lk~~~i~~e~~~i~~~~d~~~I~~~l~~~~~ 80 (385)
T d1xmxa_ 1 NAMAIHVGIIDQDPVRLVTPLLDHRTVSRHIIFIGDHTQTVIYQRLSDVLNKRNISTDFFEIPAGSNTSAIKSAIRELAE 80 (385)
T ss_dssp CTTEEEEEECCSSCHHHHHHHHSTTCCCCEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 96289999963772435568654788886699996743699999999999846986168745875576999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~v~lN~TGGTK~Msl~ay~~~r~~~~~~~Y~d~~~~rl~~l~~~~~~~~~~~~~i~i~d~l~~~~~~~~~~~~ 160 (385)
T d1xmxa_ 81 TLKARGEEVKFNASCGLRHRLLSAYEVFRSYHWPIFVVEPNSDCLCWLYPEGNNDTQVQDRITIADYLTIFGARGEFNEH 160 (385)
T ss_dssp HHHHHTCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEECTTTCEEEEEESTTSCCEECCCCCCHHHHHHHTTCEEECC--
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCC
T ss_conf 62203873999916766888999999998559846999769966999667767675577878899999984033000566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~el~~~l~~ln~~~~~~~~~~~~~~~~s~~~~~~~~~~~ll~~l~~~~~~~~~~~~l~F 240 (385)
T d1xmxa_ 161 QLSPQLDQQLYQLGERWASNALELGPGLATLNYLATTCRKEQKLDVELSDKQQGYRELNLLLSDLVEAKIASYENGILTF 240 (385)
T ss_dssp --CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSEEECCHHHHTCHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEE
T ss_conf 68866789999999998634776767999999986512212010244462244536788999988753432214863231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~a~~Fl~G~WLE~yv~~~l~~~~~~~~~~~d~~~~v~i~~~~~~~~~~nElDv~~~~~~~l~~IECKt~~~~~~~~~ 320 (385)
T d1xmxa_ 241 INEEARRFANGEWLETLVHSTVKQIQDDMPTIQDRSLNVQVYRQLGEREVRNELDVATVVNNKLHIIECKTKGMRDDGDD 320 (385)
T ss_dssp SSHHHHHHHHTTHHHHHHHHHHHHHHTTCTTEEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEEESSCCCC-CCC
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCHHH
T ss_conf 41778743588089999999999877540445026767798326888765532689999799999999568887754578
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~kl~~l~~~lgG~~~r~~LVs~~~~~~~~~~ra~~~~i~vI~~~~l~~l~~~L~~w~~~~~~~ 385 (385)
T d1xmxa_ 321 TLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELKDLKTHLTQWFKAAGGN 385 (385)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEEESSCCCHHHHHHHHHHTCEEECGGGGGGHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999998289532499999058847799999866949983888899999999999973799
|
| >d1uhga_ e.1.1.1 (A:) Ovalbumin {Hen (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Ovalbumin species: Hen (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=0 Score=29029.86 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~l~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~Laml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~ 80 (385)
T d1uhga_ 1 GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKLPGFGDSIEAQCGTSVNVH 80 (385)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHHTCTTCTTCSHHHHTTTTSCTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH
T ss_conf 96789999999999999861396986998889999999999986775899999997388877664301444203388999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~l~v~~~~~~~~~f~~~~~~~y~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~i~~~ 160 (385)
T d1uhga_ 81 SSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNV 160 (385)
T ss_dssp HHHHHHHHHHTSCCSSEEEEEEEEEEEETTSCBCHHHHHHHHHHCSSCEEEECCTTTHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999963899873699998888866765448899999987097334564311799999999999998706886566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 v~~~~l~~~t~l~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~~~~~~v~Lpy~~~~~s 240 (385)
T d1uhga_ 161 LQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMS 240 (385)
T ss_dssp SCTTSSCTTCCEEEEEEEEEEECEEECCCGGGCEEEEECCCC--CEEEEEEEEEEEEEEEEEGGGTEEEEEEEBTTSSEE
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHEECCCCCCCCCCCCCCEEEECCCCCCCEE
T ss_conf 78667896544114542799542046664555540664258994353002001021234545566817887132489758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 m~iilP~~~~~l~~~~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~adfs~is~~~~ 320 (385)
T d1uhga_ 241 MLVLLPDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSSSANLSGISSAES 320 (385)
T ss_dssp EEEEEESSTTCHHHHHHHCCHHHHHHHTSTTTCEEEEEEEEEECEEEEEEEEHHHHHHHHTCCGGGSTTCCCTTTBCSTT
T ss_pred EEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCEEHHHHHHHCCCCHHHCCCCCCCCCCCCCC
T ss_conf 99997776676155554213556999763430424599997104876311007998875598111068787656779998
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 l~vs~i~q~~~i~v~E~Gt~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 385 (385)
T d1uhga_ 321 LKISQAVHAAHAEINEAGREVVGSAEAGVDAASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP 385 (385)
T ss_dssp CCEEEEEEEEEEEECSCEEECCCHHHHHHHHTTCCCEEECCSCEEEEEEETTTCCEEEEEEESCC
T ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 06552788999998998713010120001367899779913999999998999968999994398
|
| >d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHH phosphoesterases superfamily: DHH phosphoesterases family: Exonuclease RecJ domain: Exonuclease RecJ species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29029.30 Aligned_cols=1 Identities=0% Similarity=0.736 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~l~~m~~A~~~i~~ai~~~e~I~I~gDyD~DGitS~aIl~~~L~~~g~~~~~~Ip~R~~eGyGl~~~~i~~~~~~ 80 (385)
T d1ir6a_ 1 PLALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEA 80 (385)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEECCCTTTSCSSCCGGGHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHC
T ss_conf 97676735899999999999977997999927786067999999999998899759987786656998689999998533
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~LiItvD~G~~~~e~i~~~~~~gi~vIv~DHH~~~~~~~~~~iv~~~~~~~~~~~~~gaGva~~l~~~l~~~~~~~~~~ 160 (385)
T d1ir6a_ 81 SDLFLTVDCGITNHAELRELLENGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHERLGLPPPL 160 (385)
T ss_dssp CSEEEESSCCTTCGGGHHHHTTSCCEEEEECCSCCCSSCCSSEEECGGGSTTCCCCCCHHHHHHHHHHHHHHTTTCCCCG
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCHH
T ss_conf 77699823652203667667632872321465465657401212157678850101302578999999886432442202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~l~L~aiGtiaD~~pL~~eNR~lv~~gl~~~~~~~~~g~~~L~~~~~~~~~~~di~f~i~P~iNA~GRl~~a~~a~~lL 240 (385)
T d1ir6a_ 161 EYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLL 240 (385)
T ss_dssp GGHHHHHHHHHHTTCCCSSHHHHHHHHHHHHCTTCSCHHHHHHHHHTTCCSCSHHHHHTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 44455456455455401367889987777785114558899997542213201221111131113334444310212444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~a~~~a~~l~~~N~~Rk~~~~~i~~~a~~~~~~~~~~i~~~~~~~~~GviGivAsrl~~~~~kP~iv~~~~kGS 320 (385)
T d1ir6a_ 241 LTDDAAEAQALVGELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASRILEATLRPVFLVAQGKGT 320 (385)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCTTSSSEEEECTTCCHHHHHHHHHHHHHHHCSCEEEEETTEEE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEE
T ss_conf 41236789999999887777899999999999875430335159995377662022045899999729978999667387
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Rs~~g~~l~~~l~~~~~~l~~~GGH~~AaG~~i~~~~~~~F~~~l~~~~~~~~~~~~~~~~~d~ 385 (385)
T d1ir6a_ 321 VRSLAPISAVEALRSAEDLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDPVREVALLDL 385 (385)
T ss_dssp EECCSSCCHHHHHHTTGGGCSEEEECSSEEEEECCGGGHHHHHHHHHHHHHSSCCTTTTCCSTTC
T ss_pred EECCCCCCHHHHHHHHHCHHHCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
T ss_conf 76899978999999874530137991670467974989999999999999856353220442479
|
| >d2ix0a4 b.40.4.16 (A:173-557) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Nucleic acid-binding proteins family: RNB domain-like domain: Exoribonuclease 2, RNB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=29031.00 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 e~~~~~~~~~~~~~~~R~Dl~~l~~~tID~~~a~d~DDAisie~~~~~~~~l~VHIADva~~v~~~s~Ld~~A~~R~~S~ 80 (385)
T d2ix0a4 1 EAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTN 80 (385)
T ss_dssp SCCCCCCCCCCCCCCCCEECTTSCCBEEECSSCCCCCEEEEEEEEGGGEEEEEEEECCGGGTSCTTSHHHHHHHHHCBCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHCCCCHHHHHHHHHCCCE
T ss_conf 99875431001467874208899989976999942665589999689919999998777887598999999999968838
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Ylp~~~~pMLP~~ls~~~~SL~~~~~r~a~s~~~~l~~~g~i~~~~~~~~s~I~s~~~ltY~~v~~~l~~~~~~~~~~~~ 160 (385)
T d2ix0a4 81 YLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEA 160 (385)
T ss_dssp EETTEEECSSCHHHHHTTSSCCTTCEEEEEEEEEEECTTCCBCSCCEEEEEEEECCCEEEHHHHHHHHTTCSSCCCSSHH
T ss_pred ECCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHH
T ss_conf 89999778898166420014566532047778999856761401336876789726757499999997403334532022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~l~~L~~~~~~lr~~R~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~lieE~MilaN~~va~~l~~~~~~~i 240 (385)
T d2ix0a4 161 IAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGI 240 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCCCEEEEEECTTSCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 59999999999999999874167621343022010244455413787404088888888887766899999997348873
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~R~~~~p~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~a~ys~~~~~H~gLgl~~Y 320 (385)
T d2ix0a4 241 YNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAY 320 (385)
T ss_dssp EEEBCCSCGGGHHHHHHHHHHTTCCCCTTGGGSHHHHHHHHHHHHHSSSSHHHHHTGGGCCCCEEESSCCCBTTTTBSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
T ss_conf 22222357477899999999710366855334625677776520355416789999998643103798877413084612
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 thfTSPIRRY~DLivhrqL~a~L~~~~~~~~~~ei~~~~~~~~~~a~~aer~~~~~~~~~~lk~~ 385 (385)
T d2ix0a4 321 ATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDK 385 (385)
T ss_dssp BCCSCTTTBHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 01586776377899999999997699999889999999999999999999999999999985789
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=100.00 E-value=0 Score=29026.44 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~ 80 (385)
T d2b9va2 1 HDPLSVQTGSDIPASVHMPTDQQRDYIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMRE 80 (385)
T ss_dssp CCTTTCCCSCSCC---------CCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99754345777786665887667797686889989999889999997189996018999816788876556775322354
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~ 160 (385)
T d2b9va2 81 VLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGF 160 (385)
T ss_dssp HSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHH
T ss_pred CCCHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH
T ss_conf 43057999996896899976774368898512045210011220155787799999999856674446410045667899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~a~~~~~~l~a~~~~~~~~d~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (385)
T d2b9va2 161 TVVMALLDPHPALKVAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFAT 240 (385)
T ss_dssp HHHHHHTSCCTTEEEEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
T ss_conf 99999854677634999812456532101234773011210899986541014586411114678889987252445320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~p~~~~~~~~p~~d~~w~~~s~~~~~~~~~i~vP~l~~~g~~dd~~~~g~~~~~~~l~~~~~~~~~~LiiGPw~ 320 (385)
T d2b9va2 241 QAGLDQYPFWQRMHAHPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQEDMWGAIHAWQALKDADVKAPNTLVMGPWR 320 (385)
T ss_dssp HTTGGGCHHHHHHHHCCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSSCSSHHHHHHHHHHHTTCSSCEEEEEESCC
T ss_pred HCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 10442134566530376543122315846888633556762899841368765433789999875156888579993776
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 H~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~WFD~~LKG~~~~~~~p~v~~~~~G~~~Wr~~~~W 385 (385)
T d2b9va2 321 HSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPGSASVHLPDAIIYNTGDQKWDYYRSW 385 (385)
T ss_dssp TTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 77866566666664567520013689999999999708999999999879998789827418979
|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=0 Score=29025.91 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~p~~~~~~tyD~IIVGsG~aG~vlA~rLse~~~~~VLvLEaG~~~~~~~~~~~~~~~~~~~~~~~~dw~~~t 80 (385)
T d1cf3a1 1 GIEASLLTDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYET 80 (385)
T ss_dssp CHHHHSBCCGGGTTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEEESSCCCTTSCHHHHBGGGTTTTTTSTTBCCEEC
T ss_pred CCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 96605218912126996889998968899999999987879829998889998787832048767755218978768605
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~r~~~~~~G~~lGGsS~in~~~~~R~~~~d~d~w~~~~~~~gw~~~~l~Pyf~k~E~~~~~~~~~~~~~~~~~~ 160 (385)
T d1cf3a1 81 VELATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNA 160 (385)
T ss_dssp CCCTTTSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCG
T ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 57677894365221002466512331353215866611210036878676336688999887610787311221122355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~d~n~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~nl 240 (385)
T d1cf3a1 161 SCHGVNGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNL 240 (385)
T ss_dssp GGSCSSSSEEEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTGGGTTCTTE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCC
T ss_conf 55677543334565545556878999999999769997677555665533223332322333223556533732107743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~i~t~~~V~rI~~~~~~~~~ra~GV~~~~~~g~~~~v~A~keVILsAGAi~SP~LLl~SGIGp~~~L~~~gI~~~~dlP~ 320 (385)
T d1cf3a1 241 QVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPV 320 (385)
T ss_dssp EEEESCEEEEEEEECSSSSCEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCT
T ss_pred CCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCEEEECCCHHHCHHHHHHCCCCCHHHHHHCCCCEEEECCC
T ss_conf 33377368888871899654799999986899789999688899868535499999865998378998779986998974
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 g~~~~~~~~~~~vv~~~~~v~g~~~lr~v~~s~~p~~~~~~~~~~~~~~a~~~~d~i~~~~~~~~ 385 (385)
T d1cf3a1 321 GLCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYASMQ 385 (385)
T ss_dssp TCTCBSCGGGTCSBCTTSBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 04206887766614665542660571742575786212675148799985366789998775449
|
| >d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp175a1 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=29024.59 Aligned_cols=1 Identities=0% Similarity=-1.090 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~dp~~~~~~~~~kyg~v~~~~~~~p~v~v~dp~~v~~il~~~~~~~~~~~~~~~~~~~G~gl~ 80 (385)
T d1n97a_ 1 MKRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLL 80 (385)
T ss_dssp CEECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEECCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSSTT
T ss_pred CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCEEEEECCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEE
T ss_conf 98888553538799987799999999999789789996998799989999999997289977688607779998579500
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~g~~wk~~R~~l~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~vdl~~~l~~~~~~vi~~~~fg~~~~~~~~~~~~~~ 160 (385)
T d1n97a_ 81 TDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEHALKA 160 (385)
T ss_dssp TCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 37979999999997234144432231025778999987650455335788888875520255553465432015666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ei~~~~~~~l~ag~dTt~~~l~~~l~~L~~~ 240 (385)
T d1n97a_ 161 LDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHR 240 (385)
T ss_dssp HHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 56777777666665455899999986515678899887511104697889999999988765024211211025676541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 P~v~~~l~~E~~~~~a~i~EtlRl~p~~~~~~r~~~~d~~~~g~~i~~g~~v~~~~~~~~~~~~~dp~~F~PeRf~~~~~ 320 (385)
T d1n97a_ 241 PDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEAFRPERFLEERG 320 (385)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHHSSTTTTSCCTTHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 02333333333332101201122333332212233322233333333333333332210011478876638432376567
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~lpFG~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~p~~~~~~r~r~ 385 (385)
T d1n97a_ 321 TPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQVTLRPEGGLPARPRE 385 (385)
T ss_dssp CCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCEEESSSEEETTCCEECCBC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECCCEEEEEEC
T ss_conf 88887067899765690399999999999999998378896898732460578646981788609
|
| >d2c5wb1 e.3.1.1 (B:266-650) Penicillin-binding protein 1a, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 1a, transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=29023.29 Aligned_cols=1 Identities=100% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~yp~~~d~~~~e~i~~~~~~~~~~~~~~G~~I~tTiD~~lQ~~~e~~~~~~~~~~~~~~~~~~a~vv~d~~TG~IlA~v 80 (385)
T d2c5wb1 1 SNYPAYMDNYLKEVINQVEEETGYNLLTTGMDVYTNVDQEAQKHLWDIYNTDEYVAYPDDELQVASTIVDVSNGKVIAQL 80 (385)
T ss_dssp CCSCGGGHHHHHHHHHHHHHHHSCCTTTSCEEEEECCCHHHHHHHHHHHHCSSSCCCSCSSCEEEEEEEETTTCBEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf 99748999999999998777644232069987994789999999999997534312678663289999988999399999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~yaaAle~g~~~~~~~~~~d~~~~~~~~~~~~~n~~~~~~G~itl~~al 160 (385)
T d2c5wb1 81 GARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYAL 160 (385)
T ss_dssp CCSSCCCCCTTCCCTTTCCCSCCGGGHHHHHTHHHHHHTTSCSBSSCEEEESSCBCTTSSCBCCCTTSCCCEEEEHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
T ss_conf 55655544434543201143467740447899999986497002331123454211136866422465565136650333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~S~N~~~~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~tplqla~aya~iAngG~~~~P~~i~~i 240 (385)
T d2c5wb1 161 QQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKV 240 (385)
T ss_dssp HTTCHHHHHHHHHHHCHHHHHHHHHTTTCBCSSCCGGGGSCCCCSSCCSSBSCCHHHHHHHHHHHHTTSEEECCBSEEEE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 31655300345666403368999997087545653223445441135885256899999988765147643221430122
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~d~~~~~~~~~~~~~~v~s~~~a~~~~~~m~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~WFv 320 (385)
T d2c5wb1 241 VFSDGSEKEFSNVGTRAMKETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFA 320 (385)
T ss_dssp EETTSCEEECCCCEEECSCHHHHHHHHHHHHHHHHHSTTGGGCCTTCCCEEEEEECCCCHHHHHHTCCCSSCEESCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 12344422123455420477888888764110135775221356565313565565666665444435564222205999
Q ss_pred ----------------------------------------------------------------C
Q ss_conf ----------------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 G~~P~~~~~Vwvg~~~~~~~~~~~G~~~Aapi~~~im~~~~~~~~~~~f~~P~gi~~~g~~~~~~ 385 (385)
T d2c5wb1 321 GYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSMMTYLSEGSNPEDWNIPEGLYRNGEFVFKN 385 (385)
T ss_dssp EECSSEEEEEEEECSSTTSCEEGGGGGHHHHHHHHHHHHHHSSSCCCCCCCCTTEEEETTEEEEC
T ss_pred ECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEECC
T ss_conf 55998899999940788887688722889999999999997269977799999867767089529
|
| >d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine gamma-synthase, CGS species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28957.53 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~k~~T~~vh~G~~~~~~~gav~pPI~~sst~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEgg~~a~~~sSGMaAi~~ 80 (384)
T d1cs1a_ 1 RKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHL 80 (384)
T ss_dssp CCHHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred CCHHHHEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
T ss_conf 97404214689898888998259844888746089776568743189887899999999998299706884372799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~i 160 (384)
T d1cs1a_ 81 VTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHL 160 (384)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHH
T ss_pred HHHHCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEECCHHHHHHH
T ss_conf 98631445550013465200246665421122333222356788799986216666279971456653010457887554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~~g~~~vVDNT~atP~~~~Pl~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~ 240 (384)
T d1cs1a_ 161 AREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLL 240 (384)
T ss_dssp HHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 54148679971553474546664468889998063003667774443345782665420011221122024500389996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 rgL~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~~~~~a~~f~~~L~l~~ 320 (384)
T d1cs1a_ 241 RGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFT 320 (384)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSE
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCE
T ss_conf 12111478998999999999996445886446641223301489998750689861268752466999999998389155
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlEd~eDLi~Dl~~AL~aa~~g 384 (384)
T d1cs1a_ 321 LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG 384 (384)
T ss_dssp EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf 5626687540430661015100799999866989296999865099999999999999986079
|
| >d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylococcus capsulatus [TaxId: 414]
Probab=100.00 E-value=0 Score=28955.95 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~a~~~~~~~~~r~~~~~~~p~~rr~seYE~vT~~~qp~p~~~~~~~~~~~W~~~~~~g~p~y~~ 80 (384)
T d1mtyb_ 1 ERRRGLTDPEMAAVILKALPEAPLDGNNKMGYFVTPRWKRLTEYEALTVYAQPNADWIAGGLDWGDWTQKFHGGRPSWGN 80 (384)
T ss_dssp CCCCTTTCHHHHHHHHHHCCSSCSCSCCCTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCG
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 98667998778899861277886667776424467577896643510227889956617767647764613899998886
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~Tal~~~DW~~frDP~q~~yrtY~~~qae~e~~v~~~~d~~~~~~~~~~l~~~w~~~~L~~~l~p~r~~E~ga~~~~a~ 160 (384)
T d1mtyb_ 81 ETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWRDEFINRYWGAFLFNEYGLFNAHSQ 160 (384)
T ss_dssp GGCSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGSCHHHHHTTTTTHHHHHHHHHHHHHHTTHH
T ss_pred CCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 64313447746535801889999999999999999999999996696211999999999999860240799999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~r~~~g~~i~~a~~fqa~DeLR~aQ~i~~~~~~L~~~~pgf~~~~~~~k~~W~~dp~wQg~R~~vE~~l~~~~Dw~E~~ 240 (384)
T d1mtyb_ 161 GAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNGEVYKSARLAVEGLWQEVFDWNESA 240 (384)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCSTTHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 98646868999999998766888999999999999874789862337998886048065779999998987114499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 vA~Nlv~dpll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~l~~dpe~~~~Nr~llq~Wi~~W~ 320 (384)
T d1mtyb_ 241 FSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDPEFSDYNRTVMRNWTGKWL 320 (384)
T ss_dssp HHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99876488644899999999999997698047999999998999999899999999984585332668999999999999
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~a~~Al~~~~pi~s~~p~~~~~~~~~~a~~~rv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (384)
T d1mtyb_ 321 EPTIAALRDFMGLFAKLPAGTTDKEEITASLYRVVDDWIEDYASRIDFKADRDQIVKAVLAGLK 384 (384)
T ss_dssp HHHHHHHHHHGGGGGGSCTTSCCHHHHHHHHHHHHHHHHHHTGGGGTCCCCHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 9999999987687610677878889999999999987653024103665458899999972369
|
| >d3c0na2 f.8.1.1 (A:85-468) (Pro)aerolysin, pore-forming lobe {Aeromonas hydrophila [TaxId: 644]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Aerolisin/ETX pore-forming domain superfamily: Aerolisin/ETX pore-forming domain family: (Pro)aerolysin, pore-forming lobe domain: (Pro)aerolysin, pore-forming lobe species: Aeromonas hydrophila [TaxId: 644]
Probab=100.00 E-value=0 Score=28955.93 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ip~~~~~~~~~~d~~~~~~~~v~~~~~fi~pls~LAh~LGY~W~gg~~~q~Vged~~~~r~gd~w~~~~~n~g~c~gyrc 80 (384)
T d3c0na2 1 IPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRC 80 (384)
T ss_dssp CCCCCCEEECSCCHHHHHHHHHTCTTTTHHHHHHHHHHHTBSCCSCTTCSSTTCSEEEEECSSSEEEEECCCSCCCSTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCEECCCCEEEECCCEEEEECCCCCCCCCEEE
T ss_conf 98654411389987887888762870011569999865073677677874114452566438767996256899774451
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~er~ki~~~nf~~~i~~~~f~~G~~~v~~~epi~t~s~~a~N~sDt~qt~itvt~~~t~T~TWSkT~s~~~s~sV~ik~s 160 (384)
T d3c0na2 81 GDKTAIKVSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAVNDSDTPQSGYDVTLRGDTATNWSKTNTYGLSEKVTTKNK 160 (384)
T ss_dssp TSCCEEEEEEEEEEEEEEEEEECCCSEEEEEEEEEEEEEEEECSSSCBCCEEEEEEEEEEEEEEECCSSSGGGTCBCSSC
T ss_pred CCCCEEEEEEEEEEECCCCEECCCCEEECCCEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_conf 56215898756778657644427818844542899999997389886158899999998423898654778889999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 f~iPligeteisvs~S~n~s~s~s~t~S~T~T~t~s~~VtVPP~Skv~V~i~l~rs~idVPYt~t~~I~Ydv~~~gFLRw 240 (384)
T d3c0na2 161 FKWPLVGETELSIEIAANQSWASQNGGSTTTSLSQSVRPTVPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRW 240 (384)
T ss_dssp EECCCCSSSCCCCEECTTSCGGGCCEEEEEEEECCEECCCBCTTEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEBCT
T ss_pred EECCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEC
T ss_conf 85663514469999976788850675137899888876301898359999999866873556899999998987116741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 gGNa~~~hp~~Rpt~~~tf~~g~~~~~~~~i~yq~d~r~ipg~~~~wdW~w~~~~~g~~~m~~~~~~~~R~~~s~isG~f 320 (384)
T d3c0na2 241 GGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKRYIPGEVKWWDWNWTIQQNGLSTMQNNLARVLRPVRAGITGDF 320 (384)
T ss_dssp TCCCBTTCCSSCCEEEEEEEESSCCCSTTCHHHHHHTTTCGGGCSSBCHHHHHHHHCHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 56213448988886426886057888743411243202357876511364155553567777777664222346434217
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~a~sq~~g~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 384 (384)
T d3c0na2 321 SAESQFAGNIEIGAPVPLAADSKVRRARSVDGAGQGLRLEIPLDAQELSGLGFNNVSLSVTPAA 384 (384)
T ss_dssp EEEEEEECCCEECCCEEC-----------------CCEEECCCCHHHHHHHTCEEEEEEEEECC
T ss_pred EEEECCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCEEEEEEECC
T ss_conf 8850211015524711158068642346664467863897347977886367674389976389
|
| >d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) species: Amycolatopsis mediterranei [TaxId: 33910]
Probab=100.00 E-value=0 Score=28950.23 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~g~~v~~fE~~~a~~~g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p 80 (384)
T d1b9ha_ 1 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVP 80 (384)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 98989898887999999999999739946568989999999999997969399967889999999998499988989981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~tk~i~~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ 160 (384)
T d1b9ha_ 81 AFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAH 160 (384)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEC
T ss_conf 43223221222222233211233444435665441020023332222333322233443110222333356553104033
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ga~~~g~~~g~~g~~~~~Sf~~~K~i~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aai 240 (384)
T d1b9ha_ 161 GARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASV 240 (384)
T ss_dssp TCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHH
T ss_pred CCCCCCEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 60048983675520000024555434433431243224999998899985689876666432312356632235301213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~~qL~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~y~ 320 (384)
T d1b9ha_ 241 LRAQLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFR 320 (384)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 33343211321123433446666664225666443222222222333310001000222599999999987998553072
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~~ 384 (384)
T d1b9ha_ 321 AIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVARA 384 (384)
T ss_dssp CGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred CHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 2213978885488744433344679899999839798647999998999999999999999609
|
| >d1hn0a1 a.102.3.2 (A:235-618) Chondroitin ABC lyase I {Proteus vulgaris [TaxId: 585]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitin ABC lyase I species: Proteus vulgaris [TaxId: 585]
Probab=100.00 E-value=0 Score=28949.07 Aligned_cols=1 Identities=0% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~p~~~~T~~~~~~~d~ir~R~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ng~~~g~pi~~~~~~ 80 (384)
T d1hn0a1 1 EPEIQFHNVKPQLPVTPENLAAIDLIRQRLINEFVGGEKETNLALEENISKLKSDFDALNIHTLANGGTQGRHLITDKQI 80 (384)
T ss_dssp CCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHSSCCCTTCCCCCCHHHHHHHHHTTCCEECTTSCEECCCEECTTGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
T ss_conf 98777677899888896788899999999999872688652157777899999999985686456874247755562012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~aY~~~g~~~~~~el~~~i~~~~d~l~dQg~~~gS~~~~~nww~~~i 160 (384)
T d1hn0a1 81 IIYQPENLNSQDKQLFDNYVILGNYTTLMFNISRAYVLEKDPTQKAQLKQMYLLMTKHLLDQGFVKGSALVTTHHWGYSS 160 (384)
T ss_dssp GGGCGGGSCHHHHHHHTTSEEHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCSTTCCCSCCTTHHHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCCCCHHHHHH
T ss_conf 20577676533344431266899999999999999747887322399999999999999872320378777673112238
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 r~~~~a~~Lm~d~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~n~D~~~t~~~~~l~~~Ll~~d~~e~i~~l~~l~ 240 (384)
T d1hn0a1 161 RWWYISTLLMSDALKEANLQTQVYDSLLWYSREFKSSFDMKVSADSSDLDYFNTLSRQHLALLLLEPDDQKRINLVNTFS 240 (384)
T ss_dssp HHHHHHHHHTHHHHHHTTCHHHHHHHHHHHGGGGHHHHTCCCCTTTTCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 77988999987753226789999999987446864245676677850378999999999999985599199999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~~~~~vt~G~~dGfk~DGS~~qH~~~Y~gYg~~~l~~~~~~~~ll~gT~f~~~~~~~~~l~~~l~~~~~~~~~~~~ 320 (384)
T d1hn0a1 241 HYITGALTQVPPGGKDGLRPDGTAWRHEGNYPGYSFPAFKNASQLIYLLRDTPFSVGESGWNNLKKAMVSAWIYSNPEVG 320 (384)
T ss_dssp HHHHHHHHSCCSTTCSEECTTSCEEETTEECHHHHHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHHHTBSSBBC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99887750478887886457887550678774269999999999999967998767989999999999999998454466
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~GR~p~~~~~~~~~~~a~~~~al~g~~~~D~~~A~~ylrl~~~~~~~~~~~~~~~~~pa~~ 384 (384)
T d1hn0a1 321 LPLAGRHPFNSPSLKSVAQGYYWLAMSAKSSPDKTLASIYLAISDKTQNESTAIFGETITPASL 384 (384)
T ss_dssp GGGCTTCTTSCCBGGGGHHHHHHHHTTSTTSCCHHHHHHHHHHHTCCHHHHHHHHSSCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
T ss_conf 5555777899875543189999997078866799999999987347785416676158787879
|
| >d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=100.00 E-value=0 Score=28947.82 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 G~ID~HvH~rePg~~~~~~~ed~~tgs~AAa~GGvTtvi~mp~~~p~~~~~~~~~~~~~~~~~~~a~~~~~vdy~~~~~~ 80 (384)
T d2fvka2 1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLIL 80 (384)
T ss_dssp CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEEC
T ss_pred CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 92538757788999987610329999999980895599989999999997899999999999999734850206578987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~el~~~~~~~~~~~~Gv~~~k~f~~~~~~~~~~~~l~~~l~~~~~~g~~v~~H~Ed~~~~~~~~~~~~~~ 160 (384)
T d2fvka2 81 FQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQ 160 (384)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCCCEEEEESSSTTTBCCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHT
T ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC
T ss_conf 57787661277877678888705575441213325522344779999999999754982451322078898887777655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~~~~~~~~rP~~aE~~av~r~~~la~~~g~~lhi~HiSt~~~ve~I~~ak~~G~~Vt~Et~ph~L~l~~~~~~~~~~ 240 (384)
T d2fvka2 161 GLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHH 240 (384)
T ss_dssp TCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCEEECSCCCHHHHHHHHHHHHHTCCEEEEECHHHHHCCGGGGSCC--
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHHCCCCC
T ss_conf 98774332454453213678999999887519607722335612367899853049978998376776146301024442
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~k~~PPLR~~~dr~aL~~~l~dG~Id~IaSDHaP~~~~eK~~~~~~~~~ 320 (384)
T d2fvka2 241 GEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRA 320 (384)
T ss_dssp ------CCSCCGGGSSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHHTSCSEECCCBCCCBSSCCSSTTBGGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCC
T ss_conf 22111223333222122223554310137516976999987789999977447964279627888788883355333333
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~df~~ap~G~~gle~~lpll~~~~v~~~~~~sl~~lv~~~s~nPAki~Gl~p~KGs 384 (384)
T d2fvka2 321 FDPENNKNGEFRYIPNGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGS 384 (384)
T ss_dssp EEGGGTEESCGGGSCCCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 3433345676310999974599899999999986489899999999996999999499998998
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=100.00 E-value=0 Score=28949.33 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~pi~~~f~D~~l~~~~~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~ 80 (384)
T d2omza2 1 LGSATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD 80 (384)
T ss_dssp CSCCCCSSCEEHHHHSCSHHHHHHHHHHTTCSSTTSEECHHHHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 97652589998331320889999999986777778863988957878998999898776242458999989681881798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~l~~L~~L~~L~L~~n~i~~i~~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 160 (384)
T d2omza2 81 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS 160 (384)
T ss_dssp CGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86334771101030134333222211123343334433222222222222222211213466313100232222112222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l 240 (384)
T d2omza2 161 FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASL 240 (384)
T ss_dssp EEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGC
T ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCC
T ss_conf 21232201111245421101122243332110022353233303577447878644457787888877777896134325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~ 320 (384)
T d2omza2 241 TNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNIS 320 (384)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCS
T ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEECCCCCCC
T ss_conf 65341004467447877535546687754567445787732356522223323233333221000024676777788778
Q ss_pred ---------------------------------------------------------------C
Q ss_conf ---------------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~l~~l~~l~~L~~L~L~~n~l~~l~~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 321 DISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA 384 (384)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCEE
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHCCCCCCCEEECCCCC
T ss_conf 9845366898898989899899974670899999898979958998000039999996397895
|
| >d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: ArgJ-like domain: Glutamate N-acetyltransferase 2 (ornithine acetyltransferase) species: Streptomyces clavuligerus [TaxId: 1901]
Probab=100.00 E-value=0 Score=28880.65 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 sPkGf~~~~~~aGiK~~~r~DL~li~~~~~~~~AgvFT~N~~~AApV~~~r~~l~~~~~ravvvNSGnANA~TG~~G~~~ 80 (383)
T d1vz6a_ 1 TPRGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVADGQARGVVVLARNANVATGLEGEEN 80 (383)
T ss_dssp CCTTEEEEEECCCSSTTCCCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTTTSBCCEEEEEEEECCCSCHHHHHHH
T ss_pred CCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEECCCHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHH
T ss_conf 99859999999536679998689999579976999973687530151998987526884299995374111115888999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~~~~~~A~~l~i~~~~Vl~aSTGVIG~~Lp~~kI~~~i~~l~~~l~~~~~~~AA~AImTTDt~pK~~~i~~~~~~i~G 160 (383)
T d1vz6a_ 81 AREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGEGGFDRAARAIMTTDTRPKEVRVSVGGATLVG 160 (383)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSSBCHHHHHHHTCSSCSSCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCEEEE
T ss_conf 99999876553045753145512420101464113344332112232343366544453066420258999720424777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 iaKGsGMI~PnMATML~fi~TDa~i~~~~L~~~l~~~v~~sFN~ItVDGDtSTNDtv~~lAnG~~~~~~~~~f~~aL~~v 240 (383)
T d1vz6a_ 161 IAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVDAGEFEEALHTA 240 (383)
T ss_dssp EEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred EEECCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 86014320555452478999615567688999999864145000654588887758999845875321078777778899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~LA~~Iv~DGEGATK~i~v~V~gA~s~~dA~~iAr~ia~S~LVKtA~~G~DpNWGRI~aAiG~~~~~~~~d~~~i~i~ 320 (383)
T d1vz6a_ 241 ALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIR 320 (383)
T ss_dssp HHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHTCTTCTTCCTTTCEEE
T ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHEEEE
T ss_conf 99999998636533225899998058999999999999752299998873458847777766423567766662425999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~v~~~g~~~~~~~~~~~~~~~~~m~~~ei~I~vdL~~G~~~~~~wtcDLt~~YV~INad 383 (383)
T d1vz6a_ 321 FGEVEVYPPKARGDQADDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE 383 (383)
T ss_dssp ETTEEEECC-------CHHHHHHHHHHTTSSEEEEEEECCSSSEEEEEEEECCCHHHHHHHHC
T ss_pred ECCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCHHCCCCC
T ss_conf 899999963667887733559999987457848999997888922899907698322102689
|
| >d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Ammonium transporter superfamily: Ammonium transporter family: Ammonium transporter domain: Ammonium transporter AmtB species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28878.78 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~d~~d~~~~l~~~~lV~~m~~~Gf~lle~G~vr~kn~~~~~~k~~~~~~~~~i~~~~~Gy~lafg~~~~~~g~~~~~~ 80 (383)
T d1u7ga_ 1 AVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLASGEGNNFFGNINWLM 80 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHSSCSSSCCCSTTGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHH
T ss_conf 97576459999999999999999999998611144889999999999999999886034867868489988677750542
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~fq~~Fa~~a~~IvsGavaeR~~~~~~~i~~~~~~~~vy~~~~hwvw~~g~l~~lG~~Dfa 160 (383)
T d1u7ga_ 81 LKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFPAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGALDFA 160 (383)
T ss_dssp GTTCCTTCEETTEEHHHHHHHHHHHHHHHHHHHHHHHGGGBCHHHHHHHHHHHHHHTHHHHHHHHHSSCHHHHHTCCCSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHEECCCCCCCCCCCEECC
T ss_conf 15765321222211567757633133310231103334665026753045676502156587420488753357863016
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Gs~vVH~~gG~~aL~~~~~lgpR~~~~~~~~~~~~~~~~~lG~~iLw~gW~gFN~gs~~~~~~~~~~~~~nt~~a~a~~~ 240 (383)
T d1u7ga_ 161 GGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAI 240 (383)
T ss_dssp CTTTTHHHHHHHHHHHHHHSCCCCCTTCSSCCGGGHHHHHHHHHHHHHHHHHHHHGGGSSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 74366404209899888753875445656565678146667899999999873445435520588999998776788999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~k~~~~~~~nG~LaGLVaita~~~~v~p~~A~~iG~i~g~i~~~~~~~l~~~~~iDD~~~~~~vHg~~G 320 (383)
T d1u7ga_ 241 LGWIFGEWALRGLPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCG 320 (383)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHH
T ss_conf 99999998735987799999886545540246755346156899886210778899999986601366465670321368
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 i~G~l~~glfa~~~~~g~~~~~~~~~~~ql~~Ql~g~~v~~~~~~~~~~ii~~il~~~~gLRV 383 (383)
T d1u7ga_ 321 IVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRV 383 (383)
T ss_dssp HHHHHHHHHHTSGGGTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999988998267444665654541268999999999999999999999999999984728769
|
| >d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28878.22 Aligned_cols=1 Identities=100% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~i~~~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g 80 (383)
T d1bs0a_ 1 SWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSG 80 (383)
T ss_dssp CHHHHHHHHHHHCCGGGCCCCCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 95799999999999819971112457888876998996899987653026678989999999999983898876553467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~lE~~LA~~~g~e~al~~~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~~~le~~ 160 (383)
T d1bs0a_ 81 YSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARL 160 (383)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCEEECCHHHHHHHHH
T ss_conf 40689999999987519983588604422467778760699866885045528776342357875257340578899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~~~~~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~ 240 (383)
T d1bs0a_ 161 LASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVS 240 (383)
T ss_dssp HHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSC
T ss_pred HCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 41457774499965787877723315679999886491998303123210377664558771774211245212233465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 Gg~v~~~~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~~~s~Ii 320 (383)
T d1bs0a_ 241 GAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQ 320 (383)
T ss_dssp CEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSCCSSBC
T ss_pred CCCCCCCHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 54200321677899860446664244320689999999999985025788888888899998788755986579998879
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~v~~g~~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~g 383 (383)
T d1bs0a_ 321 PLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG 383 (383)
T ss_dssp CEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 999799999999999999789149897489789998459998677799999999999998649
|
| >d1mhyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylosinus trichosporium [TaxId: 426]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Ferritin-like superfamily: Ferritin-like family: Ribonucleotide reductase-like domain: Methane monooxygenase hydrolase beta subunit species: Methylosinus trichosporium [TaxId: 426]
Probab=100.00 E-value=0 Score=28877.27 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~p~~~~~~~r~~~~f~~p~~rr~seYE~vt~~~Qp~p~~~~~~~~~~~W~~~f~~G~~~y~~~~ 80 (383)
T d1mhyb_ 1 KRGLTDPERAAIIAAAVPDHALDTQRKYHYFIQPRWKPLSEYEQLSCYAQPNPDWIAGGLDWGDWTQKFHGGRPSWGNES 80 (383)
T ss_dssp CCTTTCHHHHHHHHHHSCSSCSCCCCSTTTTSCCSSSSCCHHHHHHTTCSCCBTTSTTCCBCSCCSSCCTTCCCSSCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 99999745888998616788666677656657868789554444202677985651355654783042079999987553
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Tai~~~DW~afrDP~q~~yr~Yv~~qaeqe~~v~~~~d~~~~~~~~~~l~p~w~~~~L~~~l~p~r~~E~ga~m~~a~i~ 160 (383)
T d1mhyb_ 81 TELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWRDEILNKYFGALLYSEYGLFNAHSSVG 160 (383)
T ss_dssp CSCCCSCTTCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 00143663654580088899999989999999999999999669620089999999999986131089999998889998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 r~a~~~~i~n~~~fqa~DeLR~aQ~l~~~~~~L~~~~~gf~~~~~~~k~~W~~dp~WQ~~R~~vE~~lva~~Dw~E~~vA 240 (383)
T d1mhyb_ 161 RDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWTTDPIYSGARATVQEIWQGVQDWNEILWA 240 (383)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHCGGGHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 64675899999999988788899999999999877468987056899889844886899999999887317659999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~NlV~e~ll~~L~~~~f~~~~Aa~nGD~~t~~l~~s~q~D~~R~~~w~~alvk~~l~~d~e~~~~Nr~~lq~Wi~~W~~~ 320 (383)
T d1mhyb_ 241 GHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDSEFGAHNRTFLNAWTEHYLAS 320 (383)
T ss_dssp HHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTCTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98879986589999999999999759705699999999899999999999999998469522155899999999999999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 a~~A~~~l~pi~~~~p~~~~~~~~~~~~~a~~rv~~~~~~~~a~~i~~~~~~~~~~~~~~~~~ 383 (383)
T d1mhyb_ 321 SVAALKDFVGLYAKVEKVAGATDSAGVSEALQRVFGDWKIDYADKIGFRVDVDQKVDAVLAGY 383 (383)
T ss_dssp HHHHHHHHGGGGGGSCCCTTTTSHHHHHHHHHHHHHHHHHHTHHHHTCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
T ss_conf 999999867876047754431105789999999999885433154176546999999986469
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28875.07 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 DViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~ 80 (383)
T d2v5za1 1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEV 80 (383)
T ss_dssp SEEEECCBHHHHHHHHHHHHTTCCEEEEESSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEECCCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCEEECCCCHHHHHHHHHCCCCCEECCCC
T ss_conf 98998978899999999986899789993499874506688778982895776696798769999999859962222676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (383)
T d2v5za1 81 ERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLA 160 (383)
T ss_dssp SEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 63477347643223444200011444554899999999866430011321013455544667999998704626778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~i~~~~~v~~I~~~~~~v 240 (383)
T d2v5za1 161 TLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENV 240 (383)
T ss_dssp HHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEEESCCEEEEECSSSSE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCEE
T ss_conf 87654220246302467889999886132212333246762133144154999999987598499368606899609969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~v~~~~g~~~~ad~vI~a~p~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~ 320 (383)
T d2v5za1 241 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYME 320 (383)
T ss_dssp EEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHH
T ss_pred EEEECCCCEEECCEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCHH
T ss_conf 99988997898799998989899951824899999999999975447754401354408768668556653466775067
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
+
T Consensus 321 ga~~~g~~~a~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~P~~p~~~~~i~~~~ 383 (383)
T d2v5za1 321 GAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT 383 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCGGGSSCCCCCCSSSCCCCCCCCHHHHHCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
T ss_conf 899987999999999862588044302484224655454545605224999987403167779
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28875.44 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~r~~~~l~~~~~~Gi~~sv~~l~~~~~~~~L~~~dF~~~~k~~~~~~~~~~~~~~~~fkfk~Y~P~vF~~lR~~fgi~ 80 (383)
T d1bo1a_ 1 KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGID 80 (383)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHTTSCCCSSCCGGGGTCEEEEEEECBSSSCSSSCSEEEEEEECHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCC
T ss_conf 94410238999999737988875228996000371003445897347777886779887079983799999999981989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~h~~~~n~~TLL~k~~Gly~i~~~~ 160 (383)
T d1bo1a_ 81 DQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDG 160 (383)
T ss_dssp HHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHHHHHTTTTCCSSCCEEEEEEEEETT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEECC
T ss_conf 89999972788654345657767867880699689998579999999999899999998607875787634303787479
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~ 240 (383)
T d1bo1a_ 161 VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQ 240 (383)
T ss_dssp EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf 52799998424567765103676158632567675334555204656778764688230799999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (383)
T d1bo1a_ 241 LKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKS 320 (383)
T ss_dssp HTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC-----------------------------------CCSCCTTTSTTE
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78675043675512211112211001124555444555564322345789788302221553346644577765445445
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl~~~~g~~IS~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 321 HESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp EECSSTTEEEEEEECCSCC------------------CCCSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 678997599999999715779689999999999211889896127989999999999998649
|
| >d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Pigment epithelium-derived factor, PEDF species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28873.52 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~L~~~l~~~~~~~Niv~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~ 80 (383)
T d1imva_ 1 TGALVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSMSPTTNVLLSPLSVATALSALSLGADERTESIIHRALYYDLISS 80 (383)
T ss_dssp CCCCCCCCSHHHHSHHHHHHHHHHHHHHHHHHHHHHHCTTSCEEECHHHHHHHHHHHGGGCCHHHHHHHHHHTTGGGCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH
T ss_conf 99866554754458289999999999999999985129698199888999999999998647399999999738999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~l~~~~~~~~~~l~~~n~i~v~~~~~~~~~f~~~~~~~y~~~~~~~~~~~~~~~~~IN~wv~~~T~g~I~~~ 160 (383)
T d1imva_ 81 PDIHGTYKELLDTVTAPQKNLKSASRIVFEKKLRIKSSFVAPLEKSYGTRPRVLTGNPRLDLQEINNWVQAQMKGKLARS 160 (383)
T ss_dssp SCHHHHHHHHHHHHTSTTSCEEEEEEEEECTTCCCCHHHHHHHHHHHCCCCEECCSCHHHHHHHHHHHHHHHTTTCSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89999999998750067763677877886168741668888887623764664354479999999999985075620364
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~t~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vv~lp~~~~~sm~ 240 (383)
T d1imva_ 161 TKEIPDEISILLLGVAHFKGQWVTKFDSRKTSLEDFYLDEERTVRVPMMSDPKAVLRYGLDSDLSCKIAQLPLTGSMSII 240 (383)
T ss_dssp CSCCCSSCSEEEEEEEEEECCEEECCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEE
T ss_pred CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 33438665124311104423202556533454464234798479830211245514566516655389994137973899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 iiLP~~~~~~l~~l~~~l~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dL~~~L~~lGl~~~F~~adfs~is~~~l~vs~ 320 (383)
T d1imva_ 241 FFLPLKVTQNLTLIEESLTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLFDSPDFSKITGKPIKLTQ 320 (383)
T ss_dssp EEEESSCCSCCHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHTTTTTHHHHSCCCTTTCSSCCCEEE
T ss_pred EEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECEEEEEEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCEEEE
T ss_conf 99962667886787664068899998750642279995021887540246675431343330345674556799947445
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 v~hka~ieVdE~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P~~~ 383 (383)
T d1imva_ 321 VEHRAGFEWNEDGAGTTPSPGLQPAHLTFPLDYHLNQPFIFVLRDTDTGALLFIGKILDPRGP 383 (383)
T ss_dssp EEEEEEEEECSCEEECC--------CCCCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred EEEEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 789999999888611132222101567899679911999999999999968999995289997
|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 14 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28870.29 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~P~GL~N~GNtCY~NSvLQ~L~~ip~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~p~~~~~~l~ 80 (383)
T d2ayna1 1 MELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLH 80 (383)
T ss_dssp CCCCCEECCCSSCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHCSEECCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 98995858898406999999999766999999985145315777645277999999999999865898457799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~QqDa~Ef~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~lF~g~~~~~~~c~~c 160 (383)
T d2ayna1 81 MAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTES 160 (383)
T ss_dssp HHCGGGGCBCTTSCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------CCHHHHHTCEEEEEEEEESSS
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCC
T ss_conf 97376502555672245439999998788999998753203644211101211124667872054022899988883578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~l~L~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lP~~L~i~l~R~~~~~~~~~~ 240 (383)
T d2ayna1 161 EEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 240 (383)
T ss_dssp CCCCCBCCEEEESSEEEECSSSCCBHHHHHHHTTEECCCCEETTTTEECCEEEEEEEEECCSSEEEEEECBCCCCSSSSC
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCCCE
T ss_conf 96551002231323210221010013456665201100124532376401202346502341453410220120567621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~K~~~~v~fp~~ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L 320 (383)
T d2ayna1 241 AKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDL 320 (383)
T ss_dssp CBCCCCCBCCSEEECGGGBCHHHHHHTTTTTGGGTCTTC----------------------CCCCCSCTTTTCCCSEEEE
T ss_pred EECCCEECCCCEEECHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 33584774687664432146033013321024554432211013667554434542222236533344446789951999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~avi~H~G~s~~~GHY~a~vk~~~~~W~~~nD~~V~~v~~~~v~~~~~~~~~~~aYiLfY~r~ 383 (383)
T d2ayna1 321 QAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPR 383 (383)
T ss_dssp EEEEEEESSSTTSSEEEEEEEEETTEEEEEBTTBCCCBCHHHHGGGGSSSSSCEEEEEEEECC
T ss_pred EEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEECHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf 999999789999977089999999928999899508937999977527998893699999879
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=28869.33 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
T ss_conf 96979995787689999999999828998999826876555300133566677776541133332235541799784568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78866666224012043232443222223222233134554442232001110477533333332222334433222222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 22123357899988886676799999999998599779971230515676666555666510027999999986103454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~ 320 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred CCHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEHHHHHHH
T ss_conf 20123333037835873785546899747856888999999999986402221111346753899689996359999999
Q ss_pred --------------------------------------------------------------C
Q ss_conf --------------------------------------------------------------8
Q 001738 683 --------------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~~~ 383 (383)
T d1gy8a_ 321 ARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYA 383 (383)
T ss_dssp HHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTTC
T ss_pred HHHHHCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999869997648899999986785357899999879966787999999999999986800489
|
| >d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Putative methionine aminotransferase YdbL species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28797.10 Aligned_cols=1 Identities=0% Similarity=0.736 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~ 80 (382)
T d1u08a_ 1 PLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLY 80 (382)
T ss_dssp CCCCCCSCCCCCCCHHHHHHHHHHHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98824547799986999999996269978854988999778999999999985599889898677999999999999984
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 160 (382)
T d1u08a_ 81 GYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERT 160 (382)
T ss_dssp SCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTE
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99988772378646358889998751035640599731443213455443133200012214335689999731213574
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~R 240 (382)
T d1u08a_ 161 RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWK 240 (382)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGC
T ss_pred CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 08998798765454565332012332210243202430320210343345542000123468579985035521478665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 iG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~ 320 (382)
T d1u08a_ 241 VGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLV 320 (382)
T ss_dssp CEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEE
T ss_pred CHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEE
T ss_conf 11010210137888752022323456433322333222206777789999876300002232037857956894679989
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~l 382 (382)
T d1u08a_ 321 DYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL 382 (382)
T ss_dssp ECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTTC
T ss_pred ECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 56888999999999999997999998224527899989889999809999999999998179
|
| >d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28795.72 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~r~~~~~~s~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~ 80 (382)
T d1b5pa_ 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEK 80 (382)
T ss_dssp CCCCCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 93788999848988899999999999967998289999989999889999999999865886899987889999999764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (382)
T d1b5pa_ 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRA 160 (382)
T ss_dssp HHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTT
T ss_pred HHHHCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 44303411265534056778999999999967997989987998477999999845847998554101458999999973
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 240 (382)
T d1b5pa_ 161 ITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTG 240 (382)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGG
T ss_pred CCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCCHHHCCCCCEEEEECCHHHCCCCH
T ss_conf 78897699989997976600799999999999998590899976641232178988887818997799946346451807
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 lR~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg 320 (382)
T d1b5pa_ 241 WRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGA 320 (382)
T ss_dssp GCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBT
T ss_pred HHEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE
T ss_conf 56699998999999999998750357653222222222233121157899999999862267898876449767568941
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al~rl~~~L 382 (382)
T d1b5pa_ 321 FYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVL 382 (382)
T ss_dssp TEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC
T ss_pred EEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 79968578999999999999997897999572258999699997499999999999999869
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=0 Score=28794.47 Aligned_cols=1 Identities=0% Similarity=-0.261 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (382)
T d1wkva1 1 ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGE 80 (382)
T ss_dssp CEEEGGGGTTHHHHCCSSTTHHHHHHHHHHTEEECBSSGGGCHHHHHHHHHHTCSEEEBSSSCEEETTTTTTTCCCSCTT
T ss_pred CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEECCCCCC
T ss_conf 96421015677775324278999999986035030579975478999999844553556776531166526210489854
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~l~~~~~~~PTPLvrl~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~~~~g~~VVeaSSGN~GiAlA 160 (382)
T d1wkva1 81 MVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALS 160 (382)
T ss_dssp CEESSHHHHHHHSCSCCEEECCCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTTSCTTCEEEEECCHHHHHHHH
T ss_pred EEECCHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 67579899856899998777877888898999985478999876299999999999985268999999858759999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~~~~~~~q~~N~~~~~~h~~ttg~E 240 (382)
T d1wkva1 161 AVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTARE 240 (382)
T ss_dssp HHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCHHH
T ss_conf 99998499779996200112222222356861154375105679999876520245754332345430232112112178
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 I~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVep~~~~~i~g~~~i~~g~~~~~~~d~~~~i~~Vsd~ 320 (382)
T d1wkva1 241 IFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLE 320 (382)
T ss_dssp HHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTCCCGGGCCSHHHHSCCCCEEEEECHH
T ss_pred HHHHHHCCCCCEEEEEEECCCCCCCCCCEEEHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
T ss_conf 99996467873167897416654233320101231876623675244444445641024576575646644299997999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 Eai~a~r~La~~EGI~vgpSSGaavaaa~k~a~~~~~~~~~vVvIlcD~G~rYlstiyN~~~ 382 (382)
T d1wkva1 321 EAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE 382 (382)
T ss_dssp HHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCC
T ss_conf 99999999999819888189999999999998640689998999988897432676426789
|
| >d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28796.93 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~l~~PGP~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~ 80 (382)
T d2bkwa1 1 KSVDTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS 80 (382)
T ss_dssp CCCCEECSSSSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 98656427899788799999727326897769999999999999999985334898719999386899999999998876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~ 160 (382)
T d2bkwa1 81 KAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQA 160 (382)
T ss_dssp TCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHH
T ss_pred CCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHH
T ss_conf 07998248997312334434311100133333223677775641579998630110100232112246302441233332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~vDa~qs~g~~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (382)
T d2bkwa1 161 IKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWT 240 (382)
T ss_dssp HHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 01334310256302455322123233557569950566667689750255405999864331035888663011122100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~ 320 (382)
T d2bkwa1 241 PIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVY 320 (382)
T ss_dssp HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEE
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEC
T ss_conf 23311345556535677577789999999999876324557999999999999764115532234683011587379970
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~~~ 382 (382)
T d2bkwa1 321 VADPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 382 (382)
T ss_dssp CSCHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHHCCEEEECCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89989999999978939977877311699899858868997999999999999999997739
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=100.00 E-value=0 Score=28794.00 Aligned_cols=1 Identities=0% Similarity=-2.021 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~p~W~~~~v~Y~i~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~Gd~~gi~~kLdylk~LGv~~i~l~Pi~~~~~~~ 80 (382)
T d1ea9c3 1 FQPPAWVKDAIFYQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNH 80 (382)
T ss_dssp CCCCTHHHHCCCCEECSTTSCCCCSCSCSSCCSCCCSSSCCCSSCCCCCHHHHHHTHHHHHHHTCSEEEECCCSSCSSSS
T ss_pred CCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 97986023886999971220379988786676434555777676678189999985699986799889969770178877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1ea9c3 81 KYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIP 160 (382)
T ss_dssp TTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87754453544366777899999999986264378763013441348325556406876544430013464432235763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~~~e~~~~~~~ 240 (382)
T d1ea9c3 161 TYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPDAYILGEVWHESSI 240 (382)
T ss_dssp SBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTTCEEEECCCSCCTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf 22233344345742301388999999987515653146678743620076566545666554008981588543145532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~ 320 (382)
T d1ea9c3 241 WLEGDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQLAGYPRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVL 320 (382)
T ss_dssp TTTTTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHTTTTSCHHHHHTCEECSCCTTSCCHHHHHCSCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 13676432212343004667655046421567899999999854020654405520367666312246787999999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~l~~pG~P~Iy~G~E~g~~~~~~~~~r~~~~w~~~~~~~~l~~~~~~L~~lR~~~paL~~G 382 (382)
T d1ea9c3 321 FQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFAFYQTVIRLRQAHAALRTG 382 (382)
T ss_dssp HHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHHHHHHHHHHHHHCSHHHHC
T ss_pred HHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCC
T ss_conf 99971798787755754888999977648878877765389999999999999568975189
|
| >d1t1ua1 c.43.1.3 (A:20-401) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Choline O-acetyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=28797.26 Aligned_cols=1 Identities=0% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 e~~LP~LPvP~L~~Tl~ryL~s~~Pl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~~R 80 (382)
T d1t1ua1 1 ELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNR 80 (382)
T ss_dssp CTTSCCCCCCCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTTCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
T ss_conf 99998899999999999999985445999999999999999751698179999999987446878607778765016788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~pL~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~~~~~plcM~qy~~lF~t~RiP~~~~ 160 (382)
T d1t1ua1 81 LALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQ 160 (382)
T ss_dssp SCHHHHTCCEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTSSSCCSSSCCCCTTGGGTTTEEEECCSSS
T ss_pred CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCEECCCCCC
T ss_conf 78650056612105666876037999999999999999999756656861210224898667899998728670568998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 D~l~~~~~~~~~~~~HIvVl~~g~~y~v~v~~~~~~l~~~ei~~~l~~I~~~~~~~~~~~~~ig~LT~~~Rd~Wa~~r~~ 240 (382)
T d1t1ua1 161 DTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTV 240 (382)
T ss_dssp CEEEECCCSSSSCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHTCSTTCCCCGGGGGGSCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCEEEEEECCEEEEEEEEECCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 74665576778898779999899899999998990688999999999999624455556888450555871999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 L~~~~~N~~~L~~Ie~alfvv~LDd~~~~~~~e~~~~~~~l~g~~~~~~~~NRW~DKslq~IV~~nG~~g~~~EHS~~DG 320 (382)
T d1t1ua1 241 LLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDG 320 (382)
T ss_dssp HTTSHHHHHHHHHHHTCSCEEEECCCCSSCCCHHHHHHHHHHTTSTTTTTTSCCTTBSEEEEECTTSCEEEEECSTTCCH
T ss_pred HHCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCH
T ss_conf 85596158999999866489992799988701689999986178778998610677873799978986898504676249
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~~~~~I~~a~~~~~~~~~dl 382 (382)
T d1t1ua1 321 IVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRIVKNL 382 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTSCSSSCSCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999998640677888887778999658788658899999999999999997349
|
| >d1xl7a1 c.43.1.3 (A:11-392) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Peroxisomal carnitine O-octanoyltransferase, COT species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=28799.02 Aligned_cols=1 Identities=0% Similarity=-0.260 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 e~Tf~~q~~LP~LPvP~Le~Tl~ryL~s~~pl~~~~e~~~t~~~v~~F~~~~G~~Lq~~L~e~a~~~~NWl~~~W~~~~Y 80 (382)
T d1xl7a1 1 ERTFQYQDSLPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQEGAGKRLHQKLLERARGKRNWLEEWWLNVAY 80 (382)
T ss_dssp CCTTTTGGGCCCCCCCCHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCTTSSHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 96431427799898999899999999986566999999999999999974939999999998740698850587867753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 L~~R~pl~~~~n~~~~~~~~~~~~~~~~~~q~~raA~l~~~~~~f~~~l~~~~l~~~~~~~~plcm~qy~~lF~t~RiPg 160 (382)
T d1xl7a1 81 LDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQLLRREKLPVHKSGNTPLDMNQFRMLFSTCKVPG 160 (382)
T ss_dssp TSCCSCHHHHTCEEEECGGGGTTCCCCTTCHHHHHHHHHHHHHHHHHHHHTTCSCCCEETTEECCCGGGGGTSSEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEECHHHHHHHCCCEECCC
T ss_conf 25577864555666766556777885500699999999999999998740365471230998760799997612771689
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~D~~~~~~~~~~~~~~~~HIvVl~~g~~ykv~v~~~~~~~s~~el~~~l~~I~~~~~~~~~~~~vg~LTt~~Rd~WA~ 240 (382)
T d1xl7a1 161 ITRDSIMNYFKTESEGHCPTHIAVLCRGRAFVFDVLHEGCLITPPELLRQLTYIHKKCSNEPVGPSIAALTSEERTRWAK 240 (382)
T ss_dssp SSCCEEEECCCCTTTCCCCCEEEEEETTEEEEEESEETTEECCHHHHHHHHHHHHHHHHTSCCCCCGGGGGGSCHHHHHH
T ss_pred CCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 98772002355556789886699997893089999329908889999999999997354678887755067656479999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~R~~L~~~~~~N~~~L~~Ie~AlfvvcLD~~~~~~~~e~~~~~~~~~l~G~~~NRW~DKs~q~IV~~nG~~G~~~EHS~~ 320 (382)
T d1xl7a1 241 AREYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSVRWGDKSYNLISFANGIFGCCCDHAPY 320 (382)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHSSCEEEECCCCCCCCSSCCHHHHHHHHSSCGGGCCTTBSCEEEECTTSCEEEEECSSSC
T ss_pred HHHHHHHCCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCH
T ss_conf 99997617842699999987446888613568889858999999963859873327766713899689888987368716
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 DG~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~A~~~~~k~as 382 (382)
T d1xl7a1 321 DAMVMVNIAHYVDERVLETEGRWKGSEKVRDIPLPEELVFTVDEKILNDVSQAKAQHLKAAS 382 (382)
T ss_dssp CTHHHHHHHHHHHHHHHHTTTCCCSCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 69999999999999976127878888887789997577896698999999999999998509
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=100.00 E-value=0 Score=28795.07 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~P~w~~~~viY~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kLdyl~~lGi~~I~l~Pv~~~~~ 80 (382)
T d1wzla3 1 VFTTPEWAKEAVIYQIFPERFANGDPSNDPPGTEQWAKDARPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFASPS 80 (382)
T ss_dssp SCCCCSGGGGCCEEEECGGGTCCCCGGGCCTTCCCCCTTCCCCTTCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 97998420288799997024137998778766643344566655777785899999831999977997899798677875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1wzla3 81 HHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 45776556320236788788999999999752451576321013333333331001037654246643003654566789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1wzla3 161 TNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRLDVANEVDHAFWREFRRLVKSLNPDALIVGEIWHDAS 240 (382)
T ss_dssp CSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 74444344556678507799999999999999999758875034334335645556789998752884478620035652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~r~~~~~~~~~~~~~~a~ 320 (382)
T d1wzla3 241 GWLMGDQFDSVMNYLFRESVIRFFATGEIHAERFDAELTRARMLYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAV 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHTTSCHHHHTTCEEESCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHH
T ss_conf 02203342023302677899986514764314678888753201643245663123058775536765389799999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~llt~pG~P~iy~G~E~g~~g~~~~~~r~~~~W~~~~~~~~l~~~~~~L~~lR~~~paL~r 382 (382)
T d1wzla3 321 LFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGLFEFYKELIRLRHRLASLTR 382 (382)
T ss_dssp HHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCC
T ss_conf 99998089878973730277899995445788988655570899999999999830986488
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=28795.83 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~P~w~~~~viY~v~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~gi~~kldyl~~LGv~~i~L~Pi~~~~~ 80 (382)
T d1j0ha3 1 DLFEAPDWVKDTVWYQIFPERFANGNPSISPEGSRPWGSEDPTPTSFFGGDLQGIIDHLDYLVDLGITGIYLTPIFRSPS 80 (382)
T ss_dssp GSCCCCGGGGGCCEEEECGGGTCCSCGGGSCTTCCCTTSSCCCSSCCCCCCHHHHHHTHHHHHHHTCCEEEECCCEECSS
T ss_pred CCCCCCCCHHCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 98899964107779999755312799887766665345557766766785899999867999976998899698876876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T d1j0ha3 81 NHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPR 160 (382)
T ss_dssp SSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56877565643278879979999999986423643787752102333344312220368745557742224566545663
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~giDGfR~Da~~~~~~~~~~~~~~~~~~~~p~~~~i~e~~~~~~ 240 (382)
T d1j0ha3 161 PNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALKPDVYILGEIWHDAM 240 (382)
T ss_dssp CSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECCSSCCG
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 23332356777764440769999999998886766441157984453216645534444433202898522343234512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~ 320 (382)
T d1j0ha3 241 PWLRGDQFDAVMNYPFTDGVLRFFAKEEISARQFANQMMHVLHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLF 320 (382)
T ss_dssp GGCSSSSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHTSCHHHHHTCBCBSCCTTSCCHHHHTTTCHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 34213554410155310456654303543201221022210113654467662320467777741213488599999999
Q ss_pred -------------------------------------------------------------C
Q ss_conf -------------------------------------------------------------8
Q 001738 683 -------------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~lllt~pG~P~iy~G~E~G~~~~~~~~~r~~~~W~~~~~~~~l~~~~k~L~~lR~~~paL~r 382 (382)
T d1j0ha3 321 LFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQNKELHQHVKQLIALRKQYRSLRR 382 (382)
T ss_dssp HHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSCHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCC
T ss_conf 99998179888986863286899880103577888654576999999999999842997586
|
| >d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycoside hydrolase/deacetylase family: alpha-mannosidase domain: Golgi alpha-mannosidase II species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=28722.03 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~q~~~~~~~~~~~~~~~kl~VhlV~HsH~D~gWl~t~~e~~~~~~~~i 80 (381)
T d3bvua3 1 CQDVVQDVPNVDVQMLELYDRMSFKDIDGGVWKQGWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHI 80 (381)
T ss_dssp CCCSSSCCCCCSEEHHHHHHHCCCCCCCCSSSTTSCCCCCCGGGCBTTBCEEEEEEEEEECCSSSSSCHHHHHHHTHHHH
T ss_pred CCHHHHHCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf 94366405766622687886521538999716677512205421476788379993877888002375999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~~l~~l~~~p~~~F~~~~~~~~~~w~~~~~pe~~~~vk~lV~~GrlEivgg~wv~~De~~~~~es~Irql~~G~~~l~ 160 (381)
T d3bvua3 81 LSNALRHLHDNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLK 160 (381)
T ss_dssp HHHHHHHHHHCTTCCEEECCHHHHHHHHTTSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999879997799835389999999749999999999998798799687121463457997999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~fG~~p~~~w~~D~FGhs~~lp~il~~~Gi~~~~~~R~~~~~~~~~~~~k~lef~w~~~W~~~~~s~ilth~~~~~~Y~ 240 (381)
T d3bvua3 161 QFMNVTPTASWAIAPFGHSPTMPYILQKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYD 240 (381)
T ss_dssp HHHCCCCCEEEECSSSSBCTHHHHHHHTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSS
T ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 97599973589638887657789999856988699974135542005201466504304666899880457516555668
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~p~~~~~d~~~~~~f~f~~~~~~~~~~p~~~~~~~i~~~nv~~r~~~~~~~~~~~a~~~~tn~vL~p~G~Df~y~~a~~w 320 (381)
T d3bvua3 241 IPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEW 320 (381)
T ss_dssp GGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHH
T ss_conf 85567887211345442123455777876668766625589999999999999986216887389816668787761037
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~n~~kli~~iN~~~~~~v~i~~ST~~~Yf~al~~~~~~~~~~~P~~~gDFfpYad~~ 381 (381)
T d3bvua3 321 DVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRS 381 (381)
T ss_dssp HHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCBSST
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 7888769999999971888881899889999999999987524778877678876788899
|
| >d1by7a_ e.1.1.1 (A:) Plasminogen activator inhibitor-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28721.60 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~l~~~~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l 80 (381)
T d1by7a_ 1 EDLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFNEVGAAADKIHSSFRSLSSAI 80 (381)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSSSCEEECHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTTTCCG-GGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 90778999999999999873098985998789999999999986664999999997089987888999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~t 160 (381)
T d1by7a_ 81 NASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDT 160 (381)
T ss_dssp C------CEEEEEEEEEETTSCBCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHTTTSCTTSSCTTSCCTTC
T ss_pred HCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 56798847866000000368732889999999861773020443212599999999999975247754567855679731
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~lvna~~fk~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~~~~~~~~~~~~~~v~lp~~~~~~m~iilp~~~~~ 240 (381)
T d1by7a_ 161 RMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIAD 240 (381)
T ss_dssp CEEEEEEEEECCCBSSCCEECC---EEEEEETTEEEEECEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEESSCCS
T ss_pred HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 75611244774211578752356555333689805899516651555543136767499996147970799996277665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGi~~~F~~~~Adfs~is~~~~l~vs~i 320 (381)
T d1by7a_ 241 VSTGLELLESEITYDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMSERNDLFLSEV 320 (381)
T ss_dssp SSSSCHHHHHHCCHHHHHHHTSTTTEEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTBSCSCCCCCEE
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEE
T ss_conf 35666776642258899987512114340489965648997550569999856851120445454445678898157667
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~q~~~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 381 (381)
T d1by7a_ 321 FHQAMVDVNEEGTEAAAGTGGVMTGRTGHGGPQFVADHPFLFLIMHKITNCILFFGRFSSP 381 (381)
T ss_dssp EEEEEEEECSCBC-----------------CCEEECCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 8889999878842023133200003568999879933998999999999978999994398
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=100.00 E-value=0 Score=28718.80 Aligned_cols=1 Identities=100% Similarity=0.803 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~p~~~~lvd~~At~~tk~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~sdv~~~tG~yPAv~G~D~~~~~~~~~~ 80 (381)
T d1odza_ 1 VKPVTVKLVDSQATMETRSLFAFMQEQRRHSIMFGHQHETTQGLTITRTDGTQSDTFNAVGDFAAVYGWDTLSIVAPKAE 80 (381)
T ss_dssp CCCEECCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTCCSSCSCCSSSCCHHHHHHSSCCSEEEEEGGGTSTTCTT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCCCCCCCH
T ss_conf 98877620597779999999999998648966983355444564436665306667640377744201200135687321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~ 160 (381)
T d1odza_ 81 GDIVAQVKKAYARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGR 160 (381)
T ss_dssp CCCHHHHHHHHHTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSC
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 44999999999779959998730788987777641577643135667504899703699999999999999975540388
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~vPVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG 240 (381)
T d1odza_ 161 LIPVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLG 240 (381)
T ss_dssp BCCEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEEC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 76289964210479865667889998999999999999998715986189986478787776444201089988677888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~~l~~~~~~A~~~gKp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~p~~~~i~y~~~W~ 320 (381)
T d1odza_ 241 FDTYGPVADNADWFRNVVANAALVARMAEARGKIPVISGIGIRAPDIEAGLYDNQWYRKLISGLKADPDAREIAFLLVWR 320 (381)
T ss_dssp CEEEECSSSCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEECHHHHHTTCCCTTHHHHHHHHHHHSTTGGGCSEEEECC
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 63557888753589999999999999998559951663036667711026765426999999997282222443899985
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
+
T Consensus 321 N~~~~~~~~~~~~~~~~~~p~p~~~~~g~~~~~dF~~f~~~~~~lf~~dlp~ly~~p~~~~ 381 (381)
T d1odza_ 321 NAPQGVPGPNGTQVPHYWVPANRPENINNGTLEDFQAFYADEFTAFNRDIEQVYQRPTLIV 381 (381)
T ss_dssp CCTTCEEC--CCEECCCCSCCSSHHHHHTSHHHHHHHHHHSTTEECGGGCCSCSCCCEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCHHHHHCCCCCC
T ss_conf 6766556666677763336777634457642899999976960113444807551677779
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=100.00 E-value=0 Score=28718.12 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~p~~p~~~~~~~~~~~~~~~~~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~ 80 (381)
T d1mpxa2 1 TSPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAG 80 (381)
T ss_dssp CCTTSCSSCSSCCCCCCTTCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 98989999998777776555866988999899998999999996899973089997567789765656665444320068
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~a~~Gy~vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~ 160 (381)
T d1mpxa2 81 DDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMA 160 (381)
T ss_dssp GHHHHHTTCEEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 99999689799998137657889853315201210132006789999999998753588576504560365778889888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~~~~~l~a~v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (381)
T d1mpxa2 161 LTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLE 240 (381)
T ss_dssp HTSCCTTEEEEEEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGG
T ss_pred HHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
T ss_conf 75356521043232454252010243468335322289998642110366112110135677787525654424023144
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~LviGPw~H~~~ 320 (381)
T d1mpxa2 241 QLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDKRNTLNYLVMGPWRHSQV 320 (381)
T ss_dssp GSHHHHHHHHTCSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHHHHHHHHGGGCTTSSSEEEEEESCCTTGG
T ss_pred CCHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 46177887527875301232690266652345674389842555775653899999999842666783699936767787
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~wFD~~LKg~~~~~~~ppV~~~~~G~~~Wr~~~~W 381 (381)
T d1mpxa2 321 NYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDGAPKADTPPVFIYNTGENHWDRLKAW 381 (381)
T ss_dssp GSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTTCCCCCCCSEEEEETTTTEEEEESSS
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCC
T ss_conf 6677767766665101134689999999999727999999999889997899968407979
|
| >d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystine C-S lyase C-des species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=0 Score=28716.68 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~fp~l~~~~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~ 80 (381)
T d1elua_ 1 QFPGLANKTYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGC 80 (381)
T ss_dssp CCGGGTTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHH
T ss_pred CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHH
T ss_conf 99878988895697636899999999999999865278765315679999999999999998397945199978858986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~ 160 (381)
T d1elua_ 81 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQ 160 (381)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCC
T ss_pred HHCCHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 21000233247853899546541132011122334542222322233333205899998640233222123333456531
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~~~~~p~~~~~~ 240 (381)
T d1elua_ 161 VLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWR 240 (381)
T ss_dssp BCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTT
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 10035788987520345321022344334554442212222333333454422122305677741888986396100244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 320 (381)
T d1elua_ 241 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA 320 (381)
T ss_dssp TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 54433333443344432222333223204555433001588744421101456667899998875089769647887653
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~nt~edid~ll~~l~e~~~ 381 (381)
T d1elua_ 321 GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEEEINHLLARLADFGP 381 (381)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 1899983898899999999996896898668999799955788999999999999996691
|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: MGS-like domain: Mannosylglycerate synthase, MGS species: Rhodothermus marinus [TaxId: 29549]
Probab=100.00 E-value=0 Score=28719.12 Aligned_cols=1 Identities=100% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 slVVIP~~NEe~~il~~~v~~~a~~P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~~ 80 (381)
T d2bo4a1 1 SLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN 80 (381)
T ss_dssp CEEEEECCSSCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHH
T ss_conf 98999727885889999999997589814999986999875999999852300113321001110023546578848899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~d~V~g~y~R~~~~grvt~~l~~pll~~l~~~~~~~~i~d 160 (381)
T d2bo4a1 81 TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQ 160 (381)
T ss_dssp HHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSC
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999997088888999758767677999999999876305758986314567882236755899999860201565054
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Pl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~ 240 (381)
T d2bo4a1 161 PLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQ 240 (381)
T ss_dssp TTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTTCCCCCCSCCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
T ss_conf 77610104099999862434556567866244999999985974784478778777899999999999999987782363
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~p~~~~g~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (381)
T d2bo4a1 241 HEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLHRLMQHWTPRQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAAT 320 (381)
T ss_dssp TCCCCSCCCEEECCCCCCCHHHHTCCCSCHHHHHHHHTSSCCHHHHHHGGGSCHHHHHHHHHTTTSCCCTTCCHHHHHHH
T ss_pred CEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 33322012022557445888888752047999999999755777999998569988888987444664778767999999
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
T d2bo4a1 321 YHVLLEHFQPGDPDWEELLFKLWTTRVLNYTMTVALRGYDYAQQYLYRMLGRYRYQAALEN 381 (381)
T ss_dssp HHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999997301460688871056889999999999976079899999999877787876249
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28715.93 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~e~p~~~tedfgFk~l~~~~~~~~~~d~lP~~~~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~ 80 (381)
T d1xipa_ 1 ASSLKDEVPTETSEDFGFKFLGQKQILPSFNEKLPFASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTF 80 (381)
T ss_dssp CCEECCCCCEEEESSCEEEEEEEEECSCCCTTCCCSSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCC
T ss_pred CCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCCCC
T ss_conf 97546667816646530587166212789544589644426899577788999889977999989978786556788862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~ip~v~~vafs~d~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~ 160 (381)
T d1xipa_ 81 KWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQL 160 (381)
T ss_dssp SEEEECTTEEEEEEETTEEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EECCCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 34168998689986189899995897899985100145446554556111021886069996589778999415864444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy~~~~~~~ed~ 240 (381)
T d1xipa_ 161 AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDE 240 (381)
T ss_dssp EESEEEEEECSSEEEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSS
T ss_pred CCCCCEEEECCCCEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCC
T ss_conf 47752387338926999968968999818982036567788201578867786166899951756999987776666767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~ii~~~~~~~~f~~~~Di~~pfgs~~R~p~y~~~~l~~w~~~~~~l~iv~Ss~s~di~vl~~~~~~~~~~D~~ 320 (381)
T d1xipa_ 241 VSYDQKMYIIKHIDGSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSE 320 (381)
T ss_dssp CCCCEEEEEEEEETTEEEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEECSSSEEEESSGGG
T ss_pred CCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCC
T ss_conf 76433799982699983035256566776566667517999830056567868999556763456861367489812675
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 Ra~lP~~~~~d~Dt~piGlalD~ss~~~v~~p~~g~~~~~plP~l~vL~~~G~L~~ww~~~ 381 (381)
T d1xipa_ 321 RAVLPISEETDKDTNPIGVAVDVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLFH 381 (381)
T ss_dssp CCBCCBCTTTCCBCCEEEEEEECSCCC--------------CCEEEEEETTSEEEEEEEEC
T ss_pred CEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEC
T ss_conf 3040357788876531589997124752315788822278998899996987899999879
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=100.00 E-value=0 Score=28715.71 Aligned_cols=1 Identities=0% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~p~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2guya2 1 ATPADWRSQSIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYH 80 (381)
T ss_dssp CCHHHHTTCCEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTT
T ss_pred CCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99702147829999755211799988877787667647848999999699998779998996988778766688899998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2guya2 81 GYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQ 160 (381)
T ss_dssp SCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf 75046646655677877899999989886063213100124666545765222334689875431001344445444554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2guya2 161 VEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAGVYCIGEVLDGDPAYTC 240 (381)
T ss_dssp HHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCEEEEEEECCCCCHHHHC
T ss_conf 32023257765510103355889999998765103113555103403754589999764321402563110364075540
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~enHD~~R~~s~~~~~~~~~~a~~~l~t 320 (381)
T d2guya2 241 PYQNVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKSDCPDSTLLGTFVENHDNPRFASYTNDIALAKNVAAFIIL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHSSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 23324444224066799999996267761778999998874067643000101676752210225889999999999998
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~pGiP~iy~G~E~g~~g~~~~~~r~~~~~~~~~~~~~l~~~i~~L~~lR~~~~~~~~~~~~ 381 (381)
T d2guya2 321 NDGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381 (381)
T ss_dssp SSSEEEEETTGGGTCCCCSTTTTCCCGGGGTCCTTSHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 0897298736002757998811001466556767879999999999997488641699879
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=100.00 E-value=0 Score=28714.35 Aligned_cols=1 Identities=0% Similarity=-0.693 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~W~~~~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gG~~~g~~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~ 80 (381)
T d2aaaa2 1 LSAASWRTQSIYFLLTDRFGRTDNSTTATCNTGNEIYCGGSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYH 80 (381)
T ss_dssp CCHHHHTTCCEEECCHHHHCCTTCCSCCCCCGGGCSCCCCCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTT
T ss_pred CCCHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 98034488727999838106899998877777767758938999999799999769998994987668765788998875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T d2aaaa2 81 GYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTM 160 (381)
T ss_dssp SCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56646543311024988999999998866311110023445433456776555333587554345588766456445555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~pdln~~np~v~~~~~~~~~~~~~~~giDGfR~D~~~~~~~~f~~~~~~~~~~~~igE~~~~~~~~~~ 240 (381)
T d2aaaa2 161 VEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNKASGVYCVGEIDNGNPASDC 240 (381)
T ss_dssp HHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHHHHTSEEEECCCCSCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 67775678666675313233255667766644204221322000001233307899998744532233530379813321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~nHD~~R~~~~~~~~~~~~~a~a~llt 320 (381)
T d2aaaa2 241 PYQKVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVASDCSDPTLLGNFIENHDNPRFAKYTSDYSQAKNVLSYIFL 320 (381)
T ss_dssp GGGGTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHCSCGGGSEECSCCTTSCCGGGTCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 11344333002157899999985487307899999974331157721103435667721041246989999999999997
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~pG~P~iy~G~E~g~~g~~~p~~r~~~~~~~~~~~~~l~~~i~~L~~lRk~~~al~~~~~~ 381 (381)
T d2aaaa2 321 SDGIPIVYAGEEQHYAGGKVPYNREATWLSGYDTSAELYTWIATTNAIRKLAIAADSAYIT 381 (381)
T ss_dssp SSSEEEEETTTTTTCCCCTTTTTCCCGGGGTTCTTCHHHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCC
T ss_conf 0797675747214878998834111367677746769999999999997049453279879
|
| >d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Xylanase inhibitor TAXI-I species: Wheat (Triticum aestivum) [TaxId: 4565]
Probab=100.00 E-value=0 Score=28716.18 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~pi~~~~~~~~Y~~~i~iGtpliiDTGSs~~Wvpc~~c~~~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~ 80 (381)
T d1t6ex_ 1 LPVLAPVTKDPATSLYTIPFHDGASLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPC 80 (381)
T ss_dssp CCEEEEEEECTTTCCEEEEEETTEEEEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBC
T ss_pred CCEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98798112269988599999769866998998811460678877766562780264235757888887666678778888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~Y~~Gs~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~~ql~~~~~~ 160 (381)
T d1t6ex_ 81 TAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKV 160 (381)
T ss_dssp EECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTC
T ss_pred CEEEEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCC
T ss_conf 60677838998888799999999653223552025885112202435665444667630210588873157887651376
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~fsl~l~~~~~~~~~~~~g~~~~~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~i~DTGtt~ 240 (381)
T d1t6ex_ 161 ANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPY 240 (381)
T ss_dssp CSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSS
T ss_pred CEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCEEECCCCCCCCCCCEEEECCCCE
T ss_conf 44899554777654237603656633357833777654157874257888778518846615755456763687427734
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f~~~~~~~i~~~~y~~~ 320 (381)
T d1t6ex_ 241 VLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVD 320 (381)
T ss_dssp EEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEE
T ss_pred EECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCEEEECHHHEEEE
T ss_conf 97778999999999988751445664211101466677522622565555565431461799975996799770473899
Q ss_pred ------------------------------------------------------------C
Q ss_conf ------------------------------------------------------------8
Q 001738 683 ------------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~~~~~~~~ 381 (381)
T d1t6ex_ 321 VKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381 (381)
T ss_dssp EETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTTCCSCC-
T ss_pred ECCCCEEEEEEECCCCCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCCCC
T ss_conf 0798489999832556677888973898979848689999899999999877888887688
|
| >d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Cystathionine beta-lyase, CBL species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28648.88 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~t~~~h~~~~~dp~ga~~~PI~~sstf~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LE~~~~a~~fsSGMaAisal 80 (380)
T d1ibja_ 1 ASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 80 (380)
T ss_dssp CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH
T ss_conf 97767624279999999896188557766461887766895140898868999999999971986188603199999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~ 160 (380)
T d1ibja_ 81 THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 160 (380)
T ss_dssp HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 98627998799974033554012222110454212235751678877775067618996142443223445899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~g~~~vVDnT~atP~~~~Pl~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rg 240 (380)
T d1ibja_ 161 AQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRG 240 (380)
T ss_dssp TTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHH
T ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
T ss_conf 75980896243004300255455898999606520256667554433344126777787630466773787779999842
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~Tl~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~~~~a~~f~d~l~l~~~a~ 320 (380)
T d1ibja_ 241 IKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAV 320 (380)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 31445538889888899999997389866996056456864211222456542111111127999999998389175741
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 SlG~~~SLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGlE~~eDLi~Dl~qAl~~l~~ 380 (380)
T d1ibja_ 321 SFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 380 (380)
T ss_dssp CCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 568766130485223012089999997697939599983409999999999999976689
|
| >d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=28647.67 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~f~~~~~~~~~~~~~lvGGK~AnLgel~~~G~pVP~GFvITt~Ay~~Fi~~n~~l~~~L~~~I~~~l~~~~~~~~ 80 (380)
T d1vbga3 1 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYMG 80 (380)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98899879986568814475072889989999978599999888549999999980764658799999999987787633
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~e~~a~~s~a~~~~~~~~~~~~~~~~~~~~~~~~ 160 (380)
T d1vbga3 81 ATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLEH 160 (380)
T ss_dssp CBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHH
T ss_conf 22356421011001232034566767787751352488998863231101766555553101100034024567788888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~m~~~~~~gv~ft~~p~~~~~~~~~I~a~~Glg~~v 240 (380)
T d1vbga3 161 MKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRGTAVNV 240 (380)
T ss_dssp HHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCCCCEEE
T ss_pred HHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf 88762304543136987566788998876650487422226888887654212102477100156502641330124245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~La~l~~~iE~~yg~P 320 (380)
T d1vbga3 241 QCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKEM 320 (380)
T ss_dssp EECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSCCCEETHHHHHHCHHHHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 56663388737667613443444675213322112555545300044366531022238899999999999999981985
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 qDIEWA~~dg~L~ILQaRPv~~~~~aa~~~~~d~~~~~~i~~~~~~~~~~p~~~~~~l~~ 380 (380)
T d1vbga3 321 QDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEGLVEPRSAIKMVEPGHLDQLLHP 380 (380)
T ss_dssp EEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHGGGSCHHHHHHTTSC
T ss_pred CEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHCCC
T ss_conf 105999989989999744787557879999999988599688999873898577461399
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=28644.29 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~e~DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k~~~G 80 (380)
T d2gmha1 1 CKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSG 80 (380)
T ss_dssp CCSCCCCCCTTTSCTTSCGGGSSCCCCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
T ss_conf 98885335642245335754444574201363888998977899999999985213413999799981788899874535
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gvl~~~~l~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ae~~g~~~~~ 160 (380)
T d2gmha1 81 ACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYP 160 (380)
T ss_dssp CEECTHHHHHHCTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEET
T ss_pred CCCCHHHHHHHCCCHHHHCCCCCCCEECCEEEEEECCCCCCCCCCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 16668899987630344355301320012279963366466545670110245551320467888999987631543443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~~G~l~k~li~~~~l~~~~~~~~G~~sip 240 (380)
T d2gmha1 161 GYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQGGFQSIP 240 (380)
T ss_dssp TCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCGGGGCC
T ss_pred ECCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 01001344225773110122332323334556555643003463799956178866288876542103665545666665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~l~~~G~lLVGDAAG~vnP~~g~GI~~Am~SG~lAAeai~~al~~~~~~~~~~~~~~~~y~~~~~~s~~~~eL~~~rn~~ 320 (380)
T d2gmha1 241 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIR 320 (380)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTT
T ss_pred CCCCCCEEEEECCCCCCCHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 34069806873354313512148753220237889999999997188643103444556889987628999999863877
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~~g~~~g~~~~~~~~~~~~g~~p~tl~~~~~d~~~l~~~~~~~~i~y~~~d~~~~ 380 (380)
T d2gmha1 321 PSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQIS 380 (380)
T ss_dssp GGGGSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSS
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 898752108999999999999857898701789997889988798589998999989169
|
| >d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]
Probab=100.00 E-value=0 Score=28644.35 Aligned_cols=1 Identities=100% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~LF~P~~ig~~~lkNRiv~~pm~~~~~~~G~p~~~~~~~y~~rA~Ggglii~~~~~V~~~~~~~~~~~~~~~d~~i~ 80 (380)
T d1q45a_ 1 SNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVE 80 (380)
T ss_dssp CCCCTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHTCCTTCEEEEEEEESSTTCCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 98635898118999856875884438883889979999999999998497799974508877757899986217779988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~k~l~~~vh~~g~~~~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~ 160 (380)
T d1q45a_ 81 AWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEASEIPRVVED 160 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTTSCCGGGSGGGCCCEESSSCCCCTTTCCEECTTSCEECCCCCEECCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCHHHHHHHHHH
T ss_conf 99999999873576258875307866665545567787666557666677224267755568998843787889999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 f~~aA~~A~~aGfDgVEIh~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~lEii~aIr~~vg~~~~~~~~~~~~d~~~ 240 (380)
T d1q45a_ 161 YCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLD 240 (380)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
T ss_conf 99999999982865366000211367654165335576655764231036677779988887015672278752022366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~pv~~~Gg~~~~~ 320 (380)
T d1q45a_ 241 ATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMSSGGFNKEL 320 (380)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTSSCCSEEEEECCC---------------CHHHHHHHHHHHHSCSCEEEESSCCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHH
T ss_conf 42133123333210256676653135632477416754433334566567625667889988652488589679989999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ae~~l~~G~~DlV~~gR~liaDPdlv~K~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (380)
T d1q45a_ 321 GMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYTDYPFLAP 380 (380)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCCCCCCCGGGSSCCCSSTTTTCSCCCCC
T ss_pred HHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999998699632455299887924999996299988887466458999898577789897
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=0 Score=28643.14 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s~ltv~~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl 80 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDM 80 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHHHHHHHHHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHH
T ss_pred CCEEEEECCCEEECCEEECCHHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHH
T ss_conf 96699937807982433203676658887612011256404533765510043311133053246676662688806999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~ 160 (380)
T d1qyia_ 81 LFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH 160 (380)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCC
T ss_conf 99999999998774348985778987775436408999875365556775148888765324553144755521376528
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~ 240 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGR 240 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 75888999986899999999999877220223345533156675423013565334363999999999879959998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~ 320 (380)
T d1qyia_ 241 PYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320 (380)
T ss_dssp CHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEE
T ss_pred CHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 79999999998199534785058744133311220331102369986999999998088778899999973899886999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~~~ 380 (380)
T d1qyia_ 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLEHH 380 (380)
T ss_dssp EESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTTTC
T ss_pred ECCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHCC
T ss_conf 889989999999879988999458888643778976799999889999999999998509
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=0 Score=28641.06 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~g~nlgn~lda~~~~~~~~~~~~e~~Wgnp~~t~~~i~~ik~~Gfn~vRi 80 (380)
T d1edga_ 1 MYDASLIPNLQIPQKNIPNNDGMNFVKGLRLGWNLGNTFDAFNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRI 80 (380)
T ss_dssp CCCGGGSCCCCCCCCCCCCSHHHHHHHHHCSEEECTTSTTCCCCSSCCSGGGHHHHTTCSCCCHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 95434576564465566888789999864784623867036887656678987776699616699999999869987997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Pv~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~~~~~~~~~~~~~~~~~W~qiA~~fkd~~ 160 (380)
T d1edga_ 81 PVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKKYITSVWAQIAARFANYD 160 (380)
T ss_dssp CCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 34078826899885298999999999999997699799845667887766678656757799999999999887606898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~ 240 (380)
T d1edga_ 161 EHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPN 240 (380)
T ss_dssp TTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCC
T ss_conf 66999621344446786544532223108999999999999999999984457886089857886477543000111554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~giPviiGEfG~~~~~~~~~r~ 320 (380)
T d1edga_ 241 DISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRV 320 (380)
T ss_dssp CCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCEEEEEECCCCSSCHHHHH
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
T ss_conf 45677887799975157643566667767877655576113899999999999988754962999623376789858999
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~~~~a~~~gi~~~~Wdn~~~~~~~~~fg~~dr~~~~w~~p~~~~~~~~~~~g~~~ 380 (380)
T d1edga_ 321 EYMSYYVAQAKARGILCILWDNNNFSGTGELFGFFDRRSCQFKFPEIIDGMVKYAFGLIN 380 (380)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCCCSSSSCCCCCEETTTTEESSHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 999999999998699279987998888866745153788865889999999998648999
|
| >d1elja_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=28640.00 Aligned_cols=1 Identities=0% Similarity=-0.957 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~k~~eg~i~~W~~~~~~~~~~~~~~~~~F~~~~p~I~v~~~~~~~~~~~l~~~~~~g~~pDi~~~~~~~~~~~~~~g~l~ 80 (380)
T d1elja_ 1 MKIEEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLE 80 (380)
T ss_dssp CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCTTEEEEEEECTTHHHHHHHHTTTTCSCSEEEEEGGGHHHHHHTTCBC
T ss_pred CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCC
T ss_conf 98766389999589803899999999999987839799998689999999999976999819999937799999879963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~dG~~y~~P~~~~~~~l~ynkd~~~~~P~T~~e~~~~~~~l~~~~~~~~~~~~~~~~ 160 (380)
T d1elja_ 81 PIDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSEPPKTFDEMKAIMEKYYDPANEKYGIAWPINA 160 (380)
T ss_dssp CCTTTCCHHHHTTBCHHHHHHTEETTEECEEEEEEEECEEEEETTTCSSCCSSHHHHHHHHHHHCBGGGTBCSCBCCCSH
T ss_pred CCCHHHHHCCCCCCCHHHHHHEEECCEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 08665400221112166664103454301122222103566666676421332899999999986044771454311454
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (380)
T d1elja_ 161 YFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKAGI 240 (380)
T ss_dssp HHHHHHHTTTSCCSEETTTTEECTTSHHHHHHHHHHHHHTGGGSCSCCCHHHHHHHHHTTSSSEEEECGGGHHHHHHTTC
T ss_pred CCCCHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHC
T ss_conf 32201120478500033454467798899999999987443233545750465666405761155244288999875430
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~~l~s~e~~~~~~~~~~g~~P~~~~~~~~~~~~~~~ 320 (380)
T d1elja_ 241 NFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIKNKDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKNDP 320 (380)
T ss_dssp CEEEECCCCEEETTEEECCCCEEEEEEEEEBTTCSCHHHHHHHHHHHHHCHHHHHHHHHHHCCBCCBGGGGGCHHHHTCH
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHCCH
T ss_conf 26644458878776666652211000011244674599999999986326999999998348888777788598755193
Q ss_pred -----------------------------------------------------------C
Q ss_conf -----------------------------------------------------------8
Q 001738 683 -----------------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~g~~~~d~~~al~~~~~~i~~~~k 380 (380)
T d1elja_ 321 VIYGFGQAVQHAYLMPKSPKMSAVWGGVDGAINEILQDPQNADIEGILKKYQQEILNNMQ 380 (380)
T ss_dssp HHHHHHHHHHTCEECCCCTTHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 899999999518207889878999999999999997789992099999999999999529
|
| >d1lj5a_ e.1.1.1 (A:) Plasminogen activator inhibitor-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Plasminogen activator inhibitor-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28567.15 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~F~~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~ 80 (379)
T d1lj5a_ 1 VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYK 80 (379)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHSTTBCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHTSCTTSTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 98976888888849999999998723969869987899999999999867728999999970999873778999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~~~~~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~ 160 (379)
T d1lj5a_ 81 ELMGPWNKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQL 160 (379)
T ss_dssp HHHCGGGSSEEEEEEEEEEETTSCCCTTHHHHHHHHHSCCCEEECTTSHHHHHHHHHHHHHHTTTTSCCCSSCTTSSCTT
T ss_pred HHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 86175554520024478773567245788998787636600135555268999999999996049932331376678965
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 t~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~~M~~~~~~~~~~~~~~~~~~~~vv~Lp~~~~~~sm~iilP 240 (379)
T d1lj5a_ 161 TRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAP 240 (379)
T ss_dssp CCEEEEEEEEEEEEBSSCCCCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEBTTSSEEEEEEEE
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEECC
T ss_conf 40466721799511347677355533210346785576112354151205885036666058999603798478999647
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~v~l~lPkf~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~v 320 (379)
T d1lj5a_ 241 YEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQA 320 (379)
T ss_dssp SSTTSCTHHHHTTCCHHHHHHHHHHCEEEEEEEEEECEEEEEEEECHHHHHHTTCCGGGCTTTCCCTTTCSSSCCCEEEE
T ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 76666367776530077788777634313308999999984100277878867972235765565223678898077656
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~hk~~iev~E~G~~a~a~t~~~~~~~~~~~~f~~drPF~f~I~~~~t~~~lf~G~v~~P 379 (379)
T d1lj5a_ 321 LQKVKIEVNESGTVASSSTAVIVSARMAPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP 379 (379)
T ss_dssp EEEEEEEECSSEEEEEEEEEEEESSCCCCCCCCBCCEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEEEECCCCEEECCCCEEEECCCCCCCEEEEECCEEEEEEECCCCCEEEEEEECCC
T ss_conf 88999998787145022322542268999879940998999999999968999995398
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=100.00 E-value=0 Score=28566.09 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 md~~yDviIVGsG~aG~v~A~~La~~G~kVlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (379)
T d2f5va1 1 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 80 (379)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHCGGGHHHHHHHTCEESCCCCCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99732589989688999999999658893999936899987522346222023346664445434566333566554555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~r~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T d2f5va1 81 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 160 (379)
T ss_dssp CCCSCTTSCCCSSCCCCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 66777777667876761688821214442454122303799846216683458988863012457776688686025564
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 240 (379)
T d2f5va1 161 ESYFQTGTDQFKESIRHNLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVA 240 (379)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTSSCCEECCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCEEECCCE
T ss_conf 44454899999877775277877553445656765444210047888788589886343310433776489999956999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 V~~i~~~~~~~r~~gV~~~d~~~g~~~~i~a~~vilaaGa~~tp~lL~~Sg~~~~~~~~~~~~~~~~~~~g~h~mG~~~~ 320 (379)
T d2f5va1 241 CERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPPELLPSLGSHRMGFDEK 320 (379)
T ss_dssp EEEEEECTTSSCEEEEEEEETTTCCEEEEEEEEEEECSCHHHHHHHHHHTTSSCCSSCCTTSCCSSSTTTTBTCBCSCTT
T ss_pred EEEEEEECCCCEEEEEEEEECCCCEEEEEECEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 99999818999899999997999979999650899655766898997322002223345566753166545044566888
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~vvd~~~~v~g~~nlyv~d~sv~p~~~~~nPt~t~~alA~r~a~~i~~~~~~~~~~ 379 (379)
T d2f5va1 321 EDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFT 379 (379)
T ss_dssp TTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCSHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88724788975213289797388556775656818889999999999999862458999
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=100.00 E-value=0 Score=28563.12 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgGkTWs~~ 80 (379)
T d3sila_ 1 EKSVVFKAEGEHFTDQKGNTIVGSGSGGTTKYFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGGKTWNKK 80 (379)
T ss_dssp CEEEEECTTCCCCBCTTSCBCCCSBGGGBCCEEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSSSCCEEE
T ss_pred CCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 94089984775715889858996479986255746689997999599999667789887777519999913796589999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~i~~~~~~~~~~~~~~p~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~g~tw~~p~~~~~~ 160 (379)
T d3sila_ 81 IAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHD 160 (379)
T ss_dssp EEECCCCSCTTTCEEEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCSHHH
T ss_pred EECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 88647998765243477647887899978999999735788875430135678774247887658610001467425321
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~g~g~gi~~~~g~l~~p~~~~~~~~~~~~~~~~~~~sddgg~w~~~~~~~~~~~~E~~vve~dG~ll~ 240 (379)
T d3sila_ 161 IVTKNGTISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTDGITWSLPSGYCEGFGSENNIIEFNASLVN 240 (379)
T ss_dssp HHHHHCSEEEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESSSSSEECCSCCEECTTCCEEEEEETTEEEE
T ss_pred CCCCCCCEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEECCCCEEE
T ss_conf 12236530455057662476046534645898815899862799999857887533540356778877889864885799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~R~~g~~~v~~S~DgG~TWse~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~r~~~~~~~s~d~g~tW~~~ 320 (379)
T d3sila_ 241 NIRNSGLRRSFETKDFGKTWTEFPPMDKKVDNRNHGVQGSTITIPSGNKLVAAHSSAQNKNNDYTRSDISLYAHNLYSGE 320 (379)
T ss_dssp EECCSSBCBCEEESSSSSCCEECTTTTTCSBCCTTCCCCEEEEEEETTEEEEEEEEECCTTSSTTCCCEEEEEECTTTCC
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 98717966999986898623145665323221224321226883469919999889888888635899974688867788
Q ss_pred ----------------------------------------------------------C
Q ss_conf ----------------------------------------------------------8
Q 001738 683 ----------------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~aYS~l~~~~~~~~~~l~~lyE~~~~i~~~~lt~~l~~~~~~~ 379 (379)
T d3sila_ 321 VKLIDDFYPKVGNASGAGYSCLSYRKNVDKETLYVVYEANGSIEFQDLSRHLPVIKSYN 379 (379)
T ss_dssp EEEEEEEECSCCCTTSCCCEEEEEEEETTEEEEEEEEEETTEEEEEECGGGHHHHHTCC
T ss_pred CEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCC
T ss_conf 67995147501589970312248747989999999998999878369776477733479
|
| >d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Chinese hamster (Cricetulus griseus) [TaxId: 10029]
Probab=100.00 E-value=0 Score=28491.16 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~LtfdDVllvP~~st~~sr~V~l~t~lt~~~~l~iPIIsApMdtVt~~~mA~als~~GGLGvLhr~~~ 80 (378)
T d1jr1a1 1 GLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCT 80 (378)
T ss_dssp CBCHHHHTSSCCCCCGGGEEECCCCCCSCGGGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHHTCEEEECCSSC
T ss_pred CCCHHHHHCCCCCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 98978862568888844679847988776777562069887856899879799987388999999997899469769999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~e~~~~ev~~v~~~~~~p~~~~~~~~~l~v~aavg~~~~~~~~~~~l~~agv~vi~id~a~g~~~~~~~~i~~ik~~~~~ 160 (378)
T d1jr1a1 81 PEFQANEVRKVKKYEQYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPN 160 (378)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCBCTTSCBCCEEEECSSTHHHHHHHHHHHHTCCEEEECCSSCCSHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99999887641104327643335546789999956687789999999751555576403676202357999999987899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~iIaGnVaT~e~a~~L~~aGAD~VkVGiG~Gs~ctTr~~tGvG~pq~sai~~~~~~a~~~~vpIIADGGi~~~gdiakA 240 (378)
T d1jr1a1 161 LQVIGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIADGGIQNVGHIAKA 240 (378)
T ss_dssp CEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEE
T ss_conf 72530220129999999982999786033135444454222347665202567887511569853425333547732468
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 la~GAd~VMmGs~fAgt~EspG~~~~~~g~~~k~~~gm~S~~a~~~~~~~~~~~~~~~~~~~~~eG~~~~v~~~G~v~~~ 320 (378)
T d1jr1a1 241 LALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMDKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKF 320 (378)
T ss_dssp HHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSTTTC----------------CCCCCBCEEEEECCBCHHHH
T ss_pred EEEECCEEEECCEEEEEECCCCCCCEECCCEEEECCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEECCCCCHHHH
T ss_conf 88605435532321342004675231468332312431045554401320332103345644787317850368778999
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~l~gglrs~m~y~G~~~l~e~~~~~~~~~~~f~~~t~~~~~e~~~h~~~~~~~~~~ 378 (378)
T d1jr1a1 321 VPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKFEKRTSSAQVEGGVHSLHSYEKRLF 378 (378)
T ss_dssp HHHHHHHHHHHHHHTTCSBHHHHHHHHHHSCSCEEECCHHHHHHHSCCSCSCCCCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCCCC
T ss_conf 9999999888652657573999975333577269998845301257875541012339
|
| >d1xqga_ e.1.1.1 (A:) Maspin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Maspin species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28489.15 Aligned_cols=1 Identities=0% Similarity=-0.527 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~l~~a~~~Fa~~L~~~l~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~ 80 (378)
T d1xqga_ 1 QGSMDALQLANSAFAVDLFKQLSEKEPLGNVLFSPIALSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDV 80 (378)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHSTTSCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHTTGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 97678999999999999999987229798499888999999999998677589999999708998689999999999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~l~~~~~l~~~~~~~~~~~f~~~~~~~y~~~v~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~~~~~~~~~~t 160 (378)
T d1xqga_ 81 NKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQT 160 (378)
T ss_dssp HHHTTTSSEEEEEEEEEETTSCCCHHHHHHTTTTTTTCEEEECHHHHHHHHHHHHHHHHHHHTTTSCSCCSCTTSCCTTC
T ss_pred HCCCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 45467725887312022034532488998766323654686432440567789999999984158715456898989875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~l~na~~f~~~W~~~F~~~~T~~~~F~~~~~~~~~v~mm~~~~~~~~~~~~~l~~~vv~Lp~~~~~~sm~iilP~~~~ 240 (378)
T d1xqga_ 161 KILVVNAAYFVGKWMKKFSESETKESPFRVNKTDTKPVQMMNMEATFSMGNIDSINSKIIELPFQNKHLSMFILLPKDVE 240 (378)
T ss_dssp CEEEEEEEEEECCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEEGGGTEEEEEEEBGGGSSEEEEEEESSCC
T ss_pred EEEEEEEEEEEEEECCCCCCCCCEECCEECCCCCEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 17888875886002278755652215501289955764123101426422206777389995058995789999567665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~L~~l~~~l~~~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~lGl~~~F~~~~adfs~is~~~~l~vs~ 320 (378)
T d1xqga_ 241 DESTGLEKIEKQLNSESLSQWTNPSTMANAKVKLSIPKFKVEKMIDPKASLENLGLKHIFSEDTSDFSGMSETKGVALSN 320 (378)
T ss_dssp SSSSSCHHHHHSCSHHHHHHHTCGGGCEEEEEEEEEECEEEEEEECTHHHHHHHTCCGGGCTTTCCCTTTCSCSSCCEEE
T ss_pred CCCCHHHHHHHHCCHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEECHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 54433899998639889998743542534799998004899876255887775584000588877544577999923787
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------~ 683 (1019)
.
T Consensus 321 i~qk~~i~vdE~G~~a~~~t~~~~~~~~~~f~~drPFlf~I~d~~t~~~Lf~G~v~~P 378 (378)
T d1xqga_ 321 VIHKVSLEITEDGGDSIEVPGARILQHKDELNADHPFIYIIRHNKTRNIIFFGKFSSP 378 (378)
T ss_dssp EEEEEEEEECSCBCCCCCCTTTTTSSCCCCCBCCSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 6889999990685521223244457999879814998999999999978999993499
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=100.00 E-value=0 Score=28485.56 Aligned_cols=1 Identities=0% Similarity=-0.559 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~i~~~f~W~~~~i~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~id~~~Gt~~df~~L 80 (378)
T d1jaea2 1 EKDANFASGRNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDM 80 (378)
T ss_dssp CCCCCCCTTCEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHH
T ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHH
T ss_conf 99998879970699702574999999999999980998899092620678899877565678632268889999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 V~~aH~~GI~VilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dln~~n 160 (378)
T d1jaea2 81 TRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGS 160 (378)
T ss_dssp HHHHHHTTCEEEEEECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTS
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998567244564034421244677766555688744476788876556899886777875433100014567103389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 p~V~~~l~~~~~~w~e~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (378)
T d1jaea2 161 DYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEVIDLGGEAISKNEYTGFG 240 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHTCCCCCGGGTCCTTCCCEEEEECCCCSSSSCCGGGTTTSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHCCCCCCCCCHHCCCCC
T ss_conf 99999999999999985778446531112578787777776543132112444555404532001553200110103665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~Fl~NHD~~R~~~~~~~~~~~~~~~~lA~af~lt~p~G~P 320 (378)
T d1jaea2 241 CVLEFQFGVSLGNAFQGGNQLKNLANWGPEWGLLEGLDAVVFVDNHDNQRTGGSQILTYKNPKPYKMAIAFMLAHPYGTT 320 (378)
T ss_dssp EEECHHHHHHHHHHHTTTSCGGGGGGCSGGGTCCCGGGEEECSCCTTHHHHSCTTCCCTTSHHHHHHHHHHHHHSCSSEE
T ss_pred HHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 00021332014554305762999999855440378540457624678777588763456898999999999998579887
Q ss_pred ---------------------------------------------------------C
Q ss_conf ---------------------------------------------------------8
Q 001738 683 ---------------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~iy~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~w~~~~r~~~i~~m~~frn~~~ 378 (378)
T d1jaea2 321 RIMSSFDFTDNDQGPPQDGSGNLISPGINDDNTCSNGYVCEHRWRQVYGMVGFRNAVE 378 (378)
T ss_dssp EEEECBCCSSTTCCCCBCTTSCBCCCEECTTSCEETTBCCGGGSHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8982365577777898888987778875866787878889989999999999866479
|
| >d1a59a_ a.103.1.1 (A:) Citrate synthase {Antarctic bacterium DS2-3R [TaxId: 56673]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Antarctic bacterium DS2-3R [TaxId: 56673]
Probab=100.00 E-value=0 Score=28416.17 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~GL~Gv~v~~s~IS~Idg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~ 80 (377)
T d1a59a_ 1 EPTIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVK 80 (377)
T ss_dssp CCCCCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHH
T ss_pred CCCCCCCCCCCEECEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99889888998466075727858998799958439998714999999999978989499999999999998337986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~l~~~p~~~~pm~~l~~~~s~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~r~~~g~~~~~p~~~~~~~~~~~~ 160 (377)
T d1a59a_ 81 GAIDLLSTACHPMDVARTAVSVLGANHARAQDSSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLW 160 (377)
T ss_dssp HHHTTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99997302002113445555320344532344657777777777888899888877763268887789876256999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~l~~~Lvl~aDHg~n~StfaaR~vaSt~~d~~~~~~a~~~al~Gp~hGga~~~~~~~l~~i~~~~~~ 240 (377)
T d1a59a_ 161 MTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDE 240 (377)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 62123320888877677876542477676236666664258514467787877603420111278999999998621566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~v~~~l~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~l~~~~~~~~~~~~~~~~e~~~~~~k~l~pNvD~ 320 (377)
T d1a59a_ 241 SLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEEAKQIKPNLDY 320 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHHCCCBCTHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 50266777899999998667866466874445667406777767777665412206677899999999971799978176
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~l~~~lG~p~~~~~~lf~i~R~~G~~AH~~Eq~~~~~l~RP~~~Y~G~~~R~~p 377 (377)
T d1a59a_ 321 PAGPTYNLMGFDTEMFTPLFIAARITGWTAHIMEQVADNALIRPLSEYNGPEQRQVP 377 (377)
T ss_dssp HHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCCCCCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC
T ss_conf 999999996849667769999999999999999998579975746540389999897
|
| >d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Alanine-glyoxylate aminotransferase species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]
Probab=100.00 E-value=0 Score=28415.03 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~p~~~l~~PGP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~ 80 (377)
T d1vjoa_ 1 ISINDNQRLQLEPLEVPSRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTA 80 (377)
T ss_dssp CCCCCTTCCCCCSCCCCCCEECSSSCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
T ss_conf 96473003446799987266610899789999999757688897888999999999999999859999809998484899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~ 160 (377)
T d1vjoa_ 81 AMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQ 160 (377)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCEEEE
T ss_conf 99999984334344420242001344444454320311100135778743202456666057640345554202334630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1vjoa_ 161 PLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDM 240 (377)
T ss_dssp CCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCH
T ss_pred CHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEECC
T ss_conf 50554334552264389960002333321012456505640212440589779974132667765203589974011001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~ 320 (377)
T d1vjoa_ 241 NLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPD 320 (377)
T ss_dssp HHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCT
T ss_pred CHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCEEEEEECCC
T ss_conf 10110257653346530142022257777666533725787888887654566664168546068276097499998999
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~ 377 (377)
T d1vjoa_ 321 GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR 377 (377)
T ss_dssp TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 989999999998649999966862326998998267578999999999999999859
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28414.58 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~k~Ki~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (377)
T d1o6ca_ 1 KKLKVMTVFGTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRL 80 (377)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 98469999970585999999999997189998799993798899999985168777535443889988999999999850
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (377)
T d1o6ca_ 81 DELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLK 160 (377)
T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTTTTTTHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHH
T ss_conf 56665336653676403454301566653114227999514565433234714554003565304886323466634433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (377)
T d1o6ca_ 161 ENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHL 240 (377)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC---
T ss_pred HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 03445427523420678888777777753334430578449998323101466337899998752123355653234552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~i~Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~ 320 (377)
T d1o6ca_ 241 NPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTLKLAGT 320 (377)
T ss_dssp -CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CHHHHGGGGTCCEEEECSCCC---CTTTTSSEEECS
T ss_pred CCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHHCEEEEECCCCCCCCHHHCCEEEECCC
T ss_conf 11321122101345651475132136889999864225641640467766665414898078875822000680598789
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~k~~~~~~~ 377 (377)
T d1o6ca_ 321 DEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFT 377 (377)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHHHHHHHHTTSCSCCCCCCC
T ss_pred CHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999999999999749687763065889898982999999999985083336878999
|
| >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Glycosyl Hydrolase Family 88 domain: Unsaturated glucuronyl hydrolase species: Bacillus sp. GL1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=28412.57 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~g~~~~~~~~~Wt~Gf~~G~lwl~ye~Tgd~~~~~~a~~~~~~~~~~~~~ 80 (377)
T d2d5ja1 1 MWQQAIGDALGITARNLKKFGDRFPHVSDGSNKYVLNDNTDWTDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDR 80 (377)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCEEEEESSSSSEEEESSCSSCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 94899999999999988855101797748998377408983376479999999999869999999999999999975224
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~hd~Gf~~~~s~~~~y~~Tgd~~y~~~a~~~a~~L~~r~~~~~g~~~~w~~~~~~~~~~~~~iD~lm~~~~l~~~ 160 (377)
T d2d5ja1 81 FENLDHHDIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWA 160 (377)
T ss_dssp TTTCSSSTHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTTCTTTTTEEEGGGGGGHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 45566347631257679999987299989999999999999831867785435787888777766055125429999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~tgd~~y~~~A~~h~~~~~~~l~r~d~s~~~~~~~~~~tG~~~~~~t~qG~~~~s~WsRGqaW~i~gl~~~~~~t~~~ 240 (377)
T d2d5ja1 161 GEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNA 240 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCH
T ss_conf 88509876999999999999998268899748898865899862578888788773167632199999999999983881
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~a~~~a~~~l~~~~~dgi~~wd~~~p~~~~~~~DsSa~Ai~A~gll~L~~~~~~~~~~~~~Y~~~a~~i~~~l~~~ 320 (377)
T d2d5ja1 241 DLLETAKRMARHFLARVPEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDG 320 (377)
T ss_dssp HHHHHHHHHHHHHHTTCCTTSCCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999738877885321566678999877326789999999999852577267999999999999999876
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~iygDYy~~Eal~r~~~~~~~~w~~~~~ 377 (377)
T d2d5ja1 321 YAERDDGEAEGFIRRGSYHVRGGISPDDYTIWGDYYYLEALLRLERGVTGYWYERGR 377 (377)
T ss_dssp TBCCCCSSCCCSBSCBCSBTTTTBSSSBCBHHHHHHHHHHHHHHHHCCCTTSSCTTC
T ss_pred HHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 600689988844631635789999988673559999999999997388653745899
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=100.00 E-value=0 Score=28410.38 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~ 80 (377)
T d1k8qa_ 1 AFGKLHPTNPEVTMNISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPN 80 (377)
T ss_dssp CCCBSSCCCGGGGCCHHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCC
T ss_conf 97667789987677889999984998558999817999898998468888876689989089989996314677442752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~ 160 (377)
T d1k8qa_ 81 NSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGF 160 (377)
T ss_dssp TCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHH
T ss_pred CHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHH
T ss_conf 06999999879989998089988888887778752220137799984341799999999972999879997332699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1k8qa_ 161 IAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNAL 240 (377)
T ss_dssp HHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99986323320004675214544444114678998750136666642000114046777765431022034667877655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~ 320 (377)
T d1k8qa_ 241 FIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWN 320 (377)
T ss_dssp HHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEE
T ss_pred HHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEE
T ss_conf 42037771114677766666315553359999999999753741220330345556651345751222754899989999
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 G~~D~~~~~~~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~~ 377 (377)
T d1k8qa_ 321 GGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp ETTCSSSCHHHHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCC
T ss_conf 589972289999999997799759999699988303424454999999999997229
|
| >d2i71a1 e.72.1.1 (A:1-377) Hypothetical protein SSO1389 {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: SSO1389-like superfamily: SSO1389-like family: Cas DxTHG domain: Hypothetical protein SSO1389 species: Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=28410.06 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 m~~l~ia~wG~p~~w~~~~Y~~~~~~~~~~~s~~~l~~~~~~d~~vi~~~dSl~~~~~~~~~d~~~~~~~~~~~~~~~l~ 80 (377)
T d2i71a1 1 MASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLG 80 (377)
T ss_dssp CEEEEEEEESCTTCCCCEEEEETTEEEEESSHHHHHHHHTTCSEEEEEEEGGGGGGGTCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEECCCCCCCEEEEEEECCCEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 95499993478665728999978931204455999998747883999997301123468822799999999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~viv~P~vg~~f~g~~~~~~~~~~~~l~~~l~~~~~~eI~lD~thGiNy~~~~~~~a~~~~~~~~~~~~~~~~~l~~ 160 (377)
T d2i71a1 81 ISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSL 160 (377)
T ss_dssp CCSCEEEECCCBTTEESCTHHHHHHHHHHHHHHHHHHTEEEEEEEEEECCTTHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 88449992797628856888999999999999850389868999777870059999999999999999974578744999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~nsdP~~~~~~~~~~I~~i~~~~i~p~~~~~~i~~~fl~~~k~~~~~~~ke~~~~i~~~~~al~~gl~lyL~~~~~~~~l 240 (377)
T d2i71a1 161 YNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHL 240 (377)
T ss_dssp EECCCTTCCTTSEEECEEEEEEEECHHHHHHHHHHHHHTSCTTTTTTSSTTHHHHHHHHHHHHHTTCHHHHHHSCCHHHH
T ss_pred EECCCCCCCCCCCEEEEEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH
T ss_conf 94776568887746999840126221466554303566667777678888888899999986540429999874022327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~e~~~~~~~~~~~~e~~~~~~~~~~~~~y~~~~~~~~~~i~~~~~~~~l~~l~e~~~~~v~~~~i~~Ei~~i~~~~~~ 320 (377)
T d2i71a1 241 KRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMG 320 (377)
T ss_dssp HHHHHHHHSCCEEEECSSCEEEECCCHHHHHHHHHHHHHGGGCSCEEHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88998630002330465312302330788999999998740230210899999998861356999999999988861477
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~k~~~~~~~~~d~RNF~AHaGLe~nvt~vk~~~~~i~v~y~e~~~~i~~~l 377 (377)
T d2i71a1 321 SERKLLGEYMKVEGKGFDKRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI 377 (377)
T ss_dssp SSCEEGGGTC---------CHHHHTTTCCTTTCEEEEETTEEEEECGGGHHHHHHHC
T ss_pred CCHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCC
T ss_conf 760478886310147885300100348652729999669889998787599998419
|
| >d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: V-region of surface antigen I/II (SA I/II, PAC) family: V-region of surface antigen I/II (SA I/II, PAC) domain: V-region of surface antigen I/II (SA I/II, PAC) species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=28409.56 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~kdla~Y~~~l~~Y~~e~~~y~~alae~ek~KnedGyl~~p~aQ~LvF~~Ep~A~~ti~~~gk~~~a~~~~~~~~~~~~~ 80 (377)
T d1jmma_ 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTDGKFLKASAVDDAFSKSTSK 80 (377)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSTTSBSSCCCBCEECSCCTTCEEEEEESSEEECHHHHHHHHHSGGGH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCH
T ss_conf 94077889999999999999999999998740556663640145414316787268885255311301112233044303
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~l~kg~~vtvTYtNL~nSsynGKKI 160 (377)
T d1jmma_ 81 AKYVQKILQLDDLDITNLEQSNDVASSMELYGNFGDKAGWSTTVSNNSQVKWGSVLLERGQSATATYTNLQNSYYNGKKI 160 (377)
T ss_dssp HHHHTTEECGGGCCGGGGCSGGGEESSCCEEETTSTTSSCEETTTBTSCCEEEEEEECTTCEEEEEEECCSSCEETTEEE
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEE
T ss_conf 33101010223443224333322000002355555445501024567753025699617998999962754442178323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 sKvvytYtl~~s~s~~g~~i~~~l~~DPT~t~f~~~~~g~~~~~~~~~v~~~vkFYDe~G~~i~~~~Al~S~sSLN~~~~ 240 (377)
T d1jmma_ 161 SKIVYKYTVDPKSKFQGQKVWLGIFTDPTLGVFASAYTGQVEKNTSIFIKNEFTFYDEDGKPINFDNALLSVASLNREHN 240 (377)
T ss_dssp EEEEEEEEECTTCCCSSSCEEEEEESSGGGCEEEECCCSSCBSSCEEEEEEEEEEEETTSCBCCEEEEEEEECCCCBCSS
T ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEECCCCCEEEEECCCCCCC
T ss_conf 69999999555788888624689815995279998512666656643899999999789989226602687410258998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~iE~V~~~ng~fv~I~GSSV~~~~g~~ya~~~~~~~~~~~Gsr~~~~~~~~~~s~WD~~~s~~ayYGA~v~~~~g~~~~~ 320 (377)
T d1jmma_ 241 SIEMAKDYSGKFVKISGSSIGEKNGMIYATDTLNFKQGEGGSRWTMYKNSQAGSGWDSSDAPNSWYGAGAIKMSGPNNHV 320 (377)
T ss_dssp EEEEEESCSSEEECBTTCSEEEETTEEEECSSCCSSTTSTTCSSCSSCCSSTTCCCCSSSCTTGGGGCEEEEEEESCEEE
T ss_pred CEEEEECCCCEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEE
T ss_conf 46899748971899579766865994772677432346676421223467766787778997631123778970895489
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
+
T Consensus 321 t~g~~~a~~~~~~~~~~~~~~~d~~~~~~~~iWfa~ns~i~a~~vp~~~~e~Pt~P~ 377 (377)
T d1jmma_ 321 TVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPV 377 (377)
T ss_dssp EEEEEEGGGTSCGGGSCCCTTCCTTCCBCSEEEECCBSCCCSSSCCBCCCCCCCCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 970455432246644455666655567776231674378765458999987899989
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=0 Score=28409.16 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l 80 (377)
T d1ci9a_ 1 AASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGEL 80 (377)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCC
T ss_conf 94189999999999998289875999999999999998478624455988999986860326899999999999975996
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T d1ci9a_ 81 ALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFA 160 (377)
T ss_dssp CTTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 53322112331110134324577515013035532466633444113565540245665455899999999862888679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 PG~~~~Ys~~~~lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (377)
T d1ci9a_ 161 PGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHG 240 (377)
T ss_dssp TTSCCCCCTHHHHHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCCSCGGGBCCCEECCSSSCEECCTTEEEECCTTSC
T ss_pred CCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99627607689999998763133203455467786213875343357826640000024677653134654345545666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~G~~~~~~~~~ 320 (377)
T d1ci9a_ 241 AAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDP 320 (377)
T ss_dssp SEEEECGGGGGCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCHHHHHHHHSCSSCGGGCTTSTTEEECSSSEEESCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEECCC
T ss_conf 54345763223645555677632235999999999765116787077876650102477766678971241011430376
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~g~~~h~G~~gt~~~idP~~~l~vv~ltN~~~~~~~~~~~~~l~~~vYa 377 (377)
T d1ci9a_ 321 AAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIALRDAVYA 377 (377)
T ss_dssp HHHTCSSCTTCEEEEETTTEEEEEEGGGTEEEEEEESEETHHHHSHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCC
T ss_conf 535788999856626821418999944998999988489999875999999982189
|
| >d1nm8a1 c.43.1.3 (A:9-385) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: Choline/Carnitine O-acyltransferase domain: Carnitine acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28412.98 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~Q~sLP~LPvP~L~~Tl~ryL~s~kPl~s~ee~~~t~~~v~~F~~~~g~G~~Lq~~L~~~~~~~~nwl~~~W~~~~YL~ 80 (377)
T d1nm8a1 1 HHTDPLPRLPVPPLQQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWLKTAYLQ 80 (377)
T ss_dssp CCCCCCCCCCCCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHSSSTTHHHHHHHHTTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 96567998999999999999999865149999999999999998736860799999999975147773468899886435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~R~pl~~~~n~~~~~~~~~~~~~~~q~~rAA~l~~~~l~f~~~l~~~~l~~~~~~~~plcM~qy~~lF~t~RiP~~~~D~ 160 (377)
T d1nm8a1 81 YRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEYLGGKPLCMNQYYQILSSCRVPGPKQDT 160 (377)
T ss_dssp CCSCSBTTTBCEEECCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCEETTEECCCGGGGGTTTEEEECCSSSCE
T ss_pred CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECHHHHHHHCCCEECCCCCCCC
T ss_conf 88785466766300267777760679999999999999999998728778656589944189998761765068999883
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~~~~~~~~~~HIvV~~~g~~ykv~v~d~~g~~ls~~ei~~~l~~I~~~~~~~~~~~vg~LTt~~Rd~Wa~~r~~L~~~ 240 (377)
T d1nm8a1 161 VSNFSKTKKPPTHITVVHNYQFFELDVYHSDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKD 240 (377)
T ss_dssp EEECTTSSSCCCEEEEEETTEEEEEECBCTTSCBCCHHHHHHHHHHHHHTCCCCCSCCGGGGGGSCHHHHHHHHHHHTTS
T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 20057778888769999899899999988999899899999999999961104688886405678728999999998608
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~N~~~L~~Iesalfvv~LDd~~p~~~~e~~~~~~~~~~lhG~g~~~~~~NRW~DKs~q~IV~~nG~~g~~~EHS~~DG~ 320 (377)
T d1nm8a1 241 KVNRDSVRSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGSCGLVYEHAAAEGP 320 (377)
T ss_dssp HHHHHHHHHHHHSSCEEEEECCCSCCCSTTHHHHHHHHHHHCSCTTTTTTSCCTTBSEEEEEETTSCEEEEECTTSCCHH
T ss_pred CHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH
T ss_conf 60799999997547888833788888613666666555033687557987726665517999789877862267761289
Q ss_pred --------------------------------------------------------C
Q ss_conf --------------------------------------------------------8
Q 001738 683 --------------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~v~~~~~~v~~~~~~~~~~~~~~~~~~~p~~L~f~l~~~i~~~I~~a~~~~~~li~D 377 (377)
T d1nm8a1 321 PIVTLLDYVIEYTKKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQD 377 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999987234666788778899975878976989999999999999998259
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=100.00 E-value=0 Score=28336.49 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~i~~F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfV 80 (376)
T d2vata1 1 NRFEASLDAQDIARISLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFI 80 (376)
T ss_dssp CHHHHTSCCCEEEEEEEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEE
T ss_pred CCHHHCCCCCCEEEECCEEECCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCEEE
T ss_conf 93220345475375376782799885895699996256488899889984887677021234887077998637463389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 I~~n~lG~~~gst~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v 160 (376)
T d2vata1 81 ICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYV 160 (376)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTB
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCHHHH
T ss_conf 98346788767888877896212377545568852057889999999987386617886134278899999998361777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~li~Ia~~~~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~ 240 (376)
T d2vata1 161 RKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRN 240 (376)
T ss_dssp CCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 52312356523455778888999987422212457775433116789999999999984599999999723224422200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~L 320 (376)
T d2vata1 241 ISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPAL 320 (376)
T ss_dssp -----------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEE
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEE
T ss_conf 01000111013444332222343156799999987765530555012899999998503333338899999850899989
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
.
T Consensus 321 vI~~~sD~lFPp~~~~e~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 321 IICARSDGLYSFDEHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EEECTTCSSSCHHHHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 99868420849999999998627874999899988652266999999999999748
|
| >d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase ArnB species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=28336.16 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~E~~la~~~g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~ 80 (376)
T d1mdoa_ 1 DFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMT 80 (376)
T ss_dssp CCBCSCCCCCCHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 98668999999999999999996699768977999999999998819599968889999999998089998989872343
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~tkaIi~~h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~ 160 (376)
T d1mdoa_ 81 WVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTS 160 (376)
T ss_dssp CHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCE
T ss_pred CCCCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCHHCCCE
T ss_conf 42110001103431244114433347899999975478981999867888715333899988741946996464310674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~ 240 (376)
T d1mdoa_ 161 YKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLN 240 (376)
T ss_dssp ETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHH
T ss_pred ECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHH
T ss_conf 68820466657664278867787788888997125679998764036876443332233323311000012353440145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 Aai~~~qL~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~ 320 (376)
T d1mdoa_ 241 AAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGL 320 (376)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 66655433333579999866534554311465433221234444544332222220002133399999999987998465
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~~ 376 (376)
T d1mdoa_ 321 HFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG 376 (376)
T ss_dssp CCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ECCCHHCCHHHHHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 78532308998952887898799999859798448999999999999999999729
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28336.05 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 MKi~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (376)
T d1f6da_ 1 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKP 80 (376)
T ss_dssp CEEEEEECSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96999998267399999999999738998779999088989999999862878774400488999899999999986478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskls~~hf~~~~~~~~~L~~~G 160 (376)
T d1f6da_ 81 ILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN 160 (376)
T ss_dssp HHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEEESSHHHHHHHHHTT
T ss_pred HHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHCC
T ss_conf 89745676224310344313689998740753899852446542000474066554203200488743478886877518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ 240 (376)
T d1f6da_ 161 VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQ 240 (376)
T ss_dssp CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEE
T ss_pred CCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 98653412167248788887765423512321111022334777766998335411112009999999865434214047
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignSssgi~Ea~~lg~P~Inir~~ter~~~~~~g 320 (376)
T d1f6da_ 241 IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG 320 (376)
T ss_dssp EEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESSSGGGGTGGGGTCCEEECSSCCSCHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCEEECCCCCCCCCCEECC
T ss_conf 85254432124446766640444513323556789999984163998368506766787489889727876576412368
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~i~v~~~~~~I~~ai~~~l~~~~~~~~~~~~~npYGdG~as~rI~~iLk~~~i~~ 376 (376)
T d1f6da_ 321 TVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL 376 (376)
T ss_dssp SEEECCSSHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHHHTCCCC
T ss_pred EEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 06987899999999999997285766530457898989849999999998568999
|
| >d1k9oi_ e.1.1.1 (I:) Alaserpin (serpin 1) {Tobacco hornworm (Manduca sexta) [TaxId: 7130]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Alaserpin (serpin 1) species: Tobacco hornworm (Manduca sexta) [TaxId: 7130]
Probab=100.00 E-value=0 Score=28335.97 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 g~~~~~~~l~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~La~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~l~~ 80 (376)
T d1k9oi_ 1 GETDLQKILRESNDQFTAQMFSEVVKANPGQNVVLSAFSVLPPLGQLALASVGESHDELLRALALPNDNVTKDVFADLNR 80 (376)
T ss_dssp CTHHHHTTHHHHHHHHHHHHHHHHHTTSTTSCEEECSGGGHHHHHHHTTTBCTHHHHHHHHHTTCSCTTHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 98558999999999999999999983298981998889999999999986673899999997099985457999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~~~~~~~y~~~~~~vdf~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~l~~~~ 160 (376)
T d1k9oi_ 81 GVRAVKGVDLKMASKIYVAKGLELNDDFAAVSRDVFGSEVQNVDFVKSVEAAGAINKWVEDQTNNRIKNLVDPDALDETT 160 (376)
T ss_dssp SCSCCSSBCCEEEEEEEEESSCCBCSGGGSTTTSSSCCCEEEECTTSHHHHHHHHHHHHHHHTTTSSCCCSCGGGCCTTC
T ss_pred HHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCH
T ss_conf 87536798578854002304887166899998752286554245555699999999999986378221006877899501
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~lvna~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~v~~m~~~~~~~~~~~~~l~~~vveLP~~~~~~sm~iilP~~~~ 240 (376)
T d1k9oi_ 161 RSVLVNAIYFKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDAKMIEMSYEGDQASMIIILPNQVD 240 (376)
T ss_dssp CEEEEEEEEEEBCBSSCCCGGGCEEEEECSSSSCCEEEEEEEEEEEEEEEEETTTTEEEEEEEBGGGSEEEEEEEESSTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
T ss_conf 45665515655422278883233513053279926999723421417887507798799996237993699999668776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~l~~~~~~l~~~~~~~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~lGl~~~F~~~~ad~s~~~~~~~~l~vs~v~q~ 320 (376)
T d1k9oi_ 241 GITALEQKLKDPKALSRAEERLYNTEVEITLPKFKIETTTDLKEVLSNMNIKKLFTPGAARLENLLKTKESLTVDAAIQK 320 (376)
T ss_dssp THHHHHHHTTSTTTTTTTTTSCEEEEEEEEEECEEEEEEEEHHHHHHTTTCCSTTSTTTSCBTTTBSSCCCCCCSEEEEE
T ss_pred CHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf 63578864225346899875151228999843589752212788765438754357652312356588998788736877
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~ievdE~G~~a~a~t~~~~~~~~~~~~~~f~~drPF~f~I~~~~~~lf~G~v~~P 376 (376)
T d1k9oi_ 321 AFIEVNEEGAEAAAANAFGIVPKSLILYPEVHIDRPFYFELKIDGIPMFNGKVIEP 376 (376)
T ss_dssp EEEEECSCBSSCSSSCCSSSEESCCCCCCEEECCSCEEEEEEESSSEEEEEEESCC
T ss_pred EEEEECCCCEEEECCCCEEEECCCCCCCCEEEEECCEEEEEEECCEEEEEEEECCC
T ss_conf 89999987116001432344116788897599648979999979969999994288
|
| >d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: NifS-like protein/selenocysteine lyase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28333.47 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~iyld~a~~~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~ 80 (376)
T d1eg5a_ 1 MRVYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKT 80 (376)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHC
T ss_conf 97988786316699999999999998748987654699999999999999999998098978099979878997766621
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~ 160 (376)
T d1eg5a_ 81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVED 160 (376)
T ss_dssp HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEECCCCCCCEEEEEHH
T ss_conf 44332235763223432220128999999866988999768988727789999864899608999777665412554124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~~~~p~~~g~~~~~~~~~~~~~ 240 (376)
T d1eg5a_ 161 VTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQN 240 (376)
T ss_dssp HHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTBCSCCC
T ss_pred HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44554311467504787531246545520004865000125434357886268852576658720189875445477664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~vr~ 320 (376)
T d1eg5a_ 241 VPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVST 320 (376)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEEC
T ss_conf 02456677775402210246666666543200012331011123433211256023225997999999988559908967
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
-
T Consensus 321 G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~~l 376 (376)
T d1eg5a_ 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (376)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCHHCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 61103886206699997399834479889996589899999999999999999639
|
| >d2v3qa1 c.94.1.1 (A:1-376) PstS-like phosphate-binding protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: PstS-like phosphate-binding protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28332.72 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~i~gaGat~p~p~~~~~~~~~~~~~~y~~~GSG~G~~~~~~g~~~~~~~~~~~tvdfa~sd~~l~~~E~~~~~~~~~~~~ 80 (376)
T d2v3qa1 1 DINGGGATLPQKLYLTPDVLTAGFAPYIGVGSGKGKIAFLENKYNQFGTDTTKNVHWAGSDSKLTATELATYAADKEPGW 80 (376)
T ss_dssp CBCEEECSTTHHHHTSTTTSCTTBCCCEECCHHHHHHHHHHTCGGGTCSCTTSCCCEEEESSCCCHHHHHHHHHHTHHHH
T ss_pred CCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 93215222799999998763596789956576899999963886444556546771353477789999988774066777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~v~iPv~~~~Iai~~N~~~~~~l~Lt~~~L~~If~G~It~Wnd~~i~~p~~~I~vv~R~d~SGTt~~Ft~~L~~~~~~ 160 (376)
T d2v3qa1 81 GKLIQVPSVATSVAIPFRKAGANAVDLSVKELCGVFSGRIADWSGITGAGRSGPIQVVYRAESSGTTELFTRFLNAKCTT 160 (376)
T ss_dssp CCEEEEEEEEEECBCBBCCCCSSCCEECHHHHHHHHHTSCCBGGGSTTSCCCSBCEEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred CCEEEEEEEEEEEEEEEECCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
T ss_conf 86289747764479987347625543479999843337623001135457677854784489986078889988652755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~g~~~~~~~~~~~~~~~~~~~~~a~gs~gv~~~v~~~~~~~gaIGY~~~~ya~~~~~~l~~~~~~~~~~~~~~~~~ 240 (376)
T d2v3qa1 161 EPGTFAVTTTFANSYSLGLTPLAGAVAATGSDGVMAALNDTTVAEGRITYISPDFAAPTLAGLDDATKVARVGKGVVNGV 240 (376)
T ss_dssp SSSCBCCCSCGGGTBTTCSTTSTTCEEESHHHHHHHHHHCTTSCSCEECCBCHHHHSSSGGGGGCTTTBCEECCEEETTE
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCEEECC
T ss_conf 32234643102332245677677650003573087887540477765444430100022222103332024453000035
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~v~pt~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YPI~~~~y~~~~~~~~~~~~~~~vk~Fl 320 (376)
T d2v3qa1 241 AVEGKSPAAANVSAAISVVPLPAAADRGNPDVWVPVFGATTGGGVVAYPDSGYPILGFTNLIFSQCYANATQTGQVRDFF 320 (376)
T ss_dssp EECCBCCCTHHHHHHHHTCCCCCGGGTTCGGGGSCEEESSCBTTEEECCSSSCSCEEEEEEEEESCBSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEECCCCCCHHHHHHHHHH
T ss_conf 66621245888997651144554344566532223334322001357888851112111100002368700159999999
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~l~~~~~gq~~~~~~GyvPLp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (376)
T d2v3qa1 321 TKHYGTSANNDAAIEANAFVPLPSNWKAAVRASFLTASNALSIGNTNVCNGKGRPQ 376 (376)
T ss_dssp HHHTCSSSSSHHHHHHTTCBCCCHHHHHHHHHHHTSTTSTTSTTCHHHHTTCCBCC
T ss_pred HHHHHCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 99860553257889978974399999999999986225420227864367788999
|
| >d1wu4a1 a.102.1.2 (A:6-381) Xylanase Y {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: Xylanase Y species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=0 Score=28332.35 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~g~~~~~~y~n~~~~~g~~q~~~~~k~~~~~~~~f~~~~~~~~y~~~~~~~~yv~d~~n~dv~SEGqgYGMl~Av~~~dr 80 (376)
T d1wu4a1 1 EGAFYTREYRNLFKEFGYSEAEIQERVKDTWEQLFGDNPETKIYYEVGDDLGYLLDTGNLDVRTEGMSYGMMMAVQMDRK 80 (376)
T ss_dssp CCHHHHCCCCCHHHHTTCCHHHHHHHHHHHHHHHHSSCC--CCEEEETTTEEEECBTTTTBEEHHHHHHHHHHHHHTTCH
T ss_pred CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCH
T ss_conf 99764675552888828899999999999999981689766189971798558766799985556799999999980999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~FD~lw~wt~~~l~~~d~~~~~L~aW~~~~~g~v~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~~~Y~~~A~~il~~i 160 (376)
T d1wu4a1 81 DIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTC 160 (376)
T ss_dssp HHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999985367777666715336799997889988767999999999999874887533356999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~nPSY~~P~~~~~fa~~a~~~~~~~W~~~~~~s~~ll~~~~~~~tGL~PDw~ 240 (376)
T d1wu4a1 161 VHNGEGGPGHPMWNRDNKLIKFIPEVEFSDPSYHLPHFYELFSLWANEEDRVFWKEAAEASREYLKIACHPETGLAPEYA 240 (376)
T ss_dssp HHTTSSSSCCCSBCTTTCCBCSSTTCSEECGGGCCHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHSCTTTCCCCSSE
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 98546788865103674455558887502801037899999998613477457999999999999971147879998425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~dg~~~~~~~~~~~~yDA~Rvpl~ia~d~~w~g~~~~~~~~~~~~~~f~~~~~~~~~~~y~~dG~~~~~~~~~~~g~~a 320 (376)
T d1wu4a1 241 YYDGTPNDEKGYGHFFSDSYRVAANIGLDAEWFGGSEWSAEEINKIQAFFADKEPEDYRRYKIDGEPFEEKSLHPVGLIA 320 (376)
T ss_dssp ETTSSBCCTTSCSSBSGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCCGGGCEEECTTSCEEEEECSCHHHHHH
T ss_pred EECCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf 35895378778997750199999999977512575356799999999998634666688553368414677888679999
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~a~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~YY~~~L~Llall~lsG~~r~~~p 376 (376)
T d1wu4a1 321 TNAMGSLASVDGPYAKANVDLFWNTPVRTGNRRYYDNCLYLFAMLALSGNFKIWFP 376 (376)
T ss_dssp HHHHGGGGCTTCTTHHHHHHHHHTSCCCCSTTHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99999997279716899999987234788888878999999999998298444179
|
| >d1bhea_ b.80.1.3 (A:) Polygalacturonase {Erwinia carotovora, subsp. carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Galacturonase domain: Polygalacturonase species: Erwinia carotovora, subsp. carotovora [TaxId: 554]
Probab=100.00 E-value=0 Score=28329.68 Aligned_cols=1 Identities=100% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~T~aIq~AIdac~~Gg~V~iP~G~~~vyltg~i~LkSnv~L~l~~ga~L~~s~d~~ 80 (376)
T d1bhea_ 1 SDSRTVSEPKTPSSCTTLKADSSTATSTIQKALNNCDQGKAVRLSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAK 80 (376)
T ss_dssp CCSSCCCCCCCCCEEEEEECCSSBCHHHHHHHHTTCCTTCEEEEECSSSSEEEESCEECCTTCEEEECTTCEEEECSCSG
T ss_pred CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECEEECCCCEEEEECCEEEEECCCHH
T ss_conf 98654578989975686789997369999999987779999999699745699804897888789991997999738979
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~y~~~~~~~~~~~~~~~~~~~~i~~~~~~Ni~ItG~G~IDG~G~~~~~~~~~~~~~~~~~~~~~~~~~~rP~~i~~~~~~ 160 (376)
T d1bhea_ 81 SFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSK 160 (376)
T ss_dssp GGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCE
T ss_pred HCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEECCEEECCCCEEECCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECC
T ss_conf 96566630236751576541268824863079972768813344162277641000123444466777897699999115
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 nv~i~~iti~ns~~~~~~~~~~~~v~i~n~~I~~~~~~~NtDGidi~~s~nv~I~n~~i~~gDD~i~~ks~~~~~~~~ni 240 (376)
T d1bhea_ 161 NFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNI 240 (376)
T ss_dssp EEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEE
T ss_pred CEEEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECEEECCCCCEEEECCCCCCCCCEE
T ss_conf 68997039955993699996885599996750588657776340025645099982533048981566046677774459
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~i~n~~~~~~~g~~iGs~~~~v~nv~i~n~~~~~~~~g~~Iks~~~~gG~v~nI~f~ni~~~~v~~pi~i~~~y~~~~~~ 320 (376)
T d1bhea_ 241 SILHNDFGTGHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGS 320 (376)
T ss_dssp EEEEEEECSSSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCC
T ss_pred EEEEEEEECCCCCEECCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCC
T ss_conf 99963896688730645668778899993258688704789825887607989999968993667448998144788888
Q ss_pred -------------------------------------------------------C
Q ss_conf -------------------------------------------------------8
Q 001738 683 -------------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~i~nIt~~Ni~~~~~~~~~l~g~~~~~~~~v~~~nv~i~~~~~~~~~nv~~k~ 376 (376)
T d1bhea_ 321 NVPDWSDITFKDVTSETKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVNVKK 376 (376)
T ss_dssp CCCEEEEEEEEEEEECSCCEEEEECTTCSSCEEEEEEEEECCTTCEEEEESEEEEC
T ss_pred CCCEEEEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEECC
T ss_conf 79779518999079935325999868888823699984899759888788055329
|
| >d2fug41 e.18.1.2 (4:35-409) NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: HydB/Nqo4-like superfamily: HydB/Nqo4-like family: Nqo4-like domain: NADH-quinone oxidoreductase chain 4, Nqo4 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28262.50 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 p~~hG~~r~~~~v~ge~V~~a~~~ig~~~RGfEk~l~Gr~~~da~~i~~RICGIC~~aH~~A~~~AlE~a~gv~~p~~a~ 80 (375)
T d2fug41 1 PSTHGVLRLMVTLSGEEVLEVVPHIGYLHTGFEKTMEHRTYLQNITYTPRMDYLHSFAHDLAYALAVEKLLGAVVPPRAE 80 (375)
T ss_dssp CEEECSSSCEEEECCSSSCCEEEECCTTCCCHHHHGGGSCHHHHHHHGGGTTSSSHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCEEEEEEEECCCEEEEEEEEECCCCHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99885289999976988999898306652689998749996882212063111038799999999999991998899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~lR~l~~~~e~i~sH~l~~~~l~~~~~~~~~~~~~~~~r~~~~~~~~~~~G~~~h~~~~~~gG~~~~~~~~~~~~~~~~~ 160 (375)
T d2fug41 81 TIRVILNELSRLASHLVFLGTGLLDLGALTPFFYAFRERETILDLFEWVTGQRFHHNYIRIGGVKEDLPEEFVPELKKLL 160 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTSSSSSCCCEETTEESSCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCEEECCCHHHHHHHHHHH
T ss_conf 99999999988767999999834520024388899999899999999846865520521202302279867889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 240 (375)
T d2fug41 161 EVLPHRIDEYEALFAESPIFYERARGVGVIPPEVAIDLGLTGGSLRASGVNYDVRKAYPYSGYETYTFDVPLGERGDVFD 240 (375)
T ss_dssp TTTTTTTHHHHHHHSSCSCCTTSCSCCCCSSSCSTTTTTTCCSSCCSSCCTTTTTCCSSCCCC-----CCCCCCSSSSHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76088778898740367500002577533451023315765554555642133120067554556565534424776432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~g~g~vEApRG~L~ 320 (375)
T d2fug41 241 RMLVRIREMRESVKIIKQALERLEPGPVRDPNPQITPPPRHLLETSMEAVIYHFKHYTEGFHPPKGEVYVPTESARGELG 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSCCBCCCTTTSCCCTTCTTTCTTHHHHHHHHHHSCCCCCSCCCCCCBCCSSSCBC
T ss_pred CCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEE
T ss_conf 10213444421468999899748898744344110335699997554541013444566776899579999974886799
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------8
Q 001738 683 ------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------~ 683 (1019)
.
T Consensus 321 H~~~~d~~g~i~~~~ii~PT~~N~~~~e~al~G~~i~D~~~iirSfDpC~sC~dr 375 (375)
T d2fug41 321 YYIVSDGGSMPYRVKVRAPSFVNLQSLPYACKGEQVPDMVAIIASLDPVMGDVDR 375 (375)
T ss_dssp EEEECCSSSSCSEEEECCSHHHHTTTHHHHTTTSCGGGTTHHHHTTCCCHHHHHC
T ss_pred EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999989981899999898877999999996799167899998567976447898
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=28260.17 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~i~EG~~~i~vp~~~~~~~~~vFYNp~q~~NRDlsvl~~~~~~~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~ 80 (375)
T d2dula1 1 LIEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISED 80 (375)
T ss_dssp CEEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHH
T ss_pred CEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 94899586899941787778788242877764107999999973998799868774099999998589978998259989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~v 160 (375)
T d2dula1 81 AYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGV 160 (375)
T ss_dssp HHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999986375432211243323554336741004556567515767744578888817999999997044877999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 TaTD~a~L~G~~~~~~~r~Yg~~~~~~~~~~E~glRill~~i~r~Aa~~~~~i~PllS~~~~~y~Rv~vrv~~~~~~~~~ 240 (375)
T d2dula1 161 TATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDE 240 (375)
T ss_dssp EECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEESHHHHHH
T ss_pred EECCCHHHCCCCCHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEECCHHHHHH
T ss_conf 93686120479917899972876137866501889999999999987429805999999824607999999137677887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~g~~~~C~~c~~~~~~~~~~~~~~~~~GPlW~G~L~d~efl~~~~~~~~~~~~~~~~~~~~ll~~i~eE~~~P~~y 320 (375)
T d2dula1 241 TLEKLGYIYFDDKTGKFELEQGFLPTRPNAYGPVWLGPLKDEKIVSKMVKEAESLSLARKKQALKLLKMIDQELDIPLFY 320 (375)
T ss_dssp HHTTEEEEEECTTTCCEEEEESSSCCSSSCEEEEECSCSBCHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHSCCSSCCE
T ss_pred HHHHCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 88744817871898877775588999787867883673369999999998754057540569999999998614998298
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------8
Q 001738 683 ------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~la~~lk~~~P~~~~~~~aL~~~Gy~asrtH~~p~~iKTdAp~~~i~~i~r~ 375 (375)
T d2dula1 321 DTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIETIKR 375 (375)
T ss_dssp EHHHHHHHHTCCBCCHHHHHHHHHHTTCCEEEETTEEEEEEESSCHHHHHHHHBC
T ss_pred CHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHHHHHHHHC
T ss_conf 5799998739999999999999997898899657899977137999999999709
|
| >d1ih7a1 c.55.3.5 (A:1-375) Exonuclease domain of family B DNA polymerases {Bacteriophage RB69 [TaxId: 12353]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage RB69 [TaxId: 12353]
Probab=100.00 E-value=0 Score=28259.92 Aligned_cols=1 Identities=0% Similarity=-1.090 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~fyt~v~~~gn~i~~rg~d~nG~r~~~~~~f~Py~Yv~~~~~~~t~~ksl~G~~v~~v~f~s~~e~r~~~k~~~~~~~ 80 (375)
T d1ih7a1 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGL 80 (375)
T ss_dssp CCCEEEEEEEETTEEEEEEECTTSCEEEEEECCCCEEEEECCTTSCCSCEETTSCBEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 98644022799999999999679989999954730699988999864534148817666746988999999997155543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~~~~~~~~~~i~d~~~~~~~~~~~~~~~~~~DIE~~~~~~~p~~~~~~~~i~~I~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1ih7a1 81 EALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVE 160 (375)
T ss_dssp CCBSCCCHHHHHHHHHTCSCCCCCGGGSCEEEEEEEECCSSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCTTCCCC
T ss_pred EECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf 11256641201012357654566754220455788970576656864232100011246615880999996377756654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~sE~eLL~~F~~~~~~~dPDiitGwN~~~FD~pYL~~R~~~~~~~~~~~ 240 (375)
T d1ih7a1 161 EWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAK 240 (375)
T ss_dssp CCCHHHHHSCTTTTCCCCCHHHHTTEEEEEESSHHHHHHHHHHHHHHSCCSEEEETTTTTTHHHHHHHHHHHHHCHHHHG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHH
T ss_conf 32212233311124555655567985999829999999999999876498899871777887099999998640100233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~D~~~~~~~~~~~~~~s~~l~~v~~~~l~~~K~~~~~~~~~~~~~d~~~~ 320 (375)
T d1ih7a1 241 RLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRY 320 (375)
T ss_dssp GGSTTSCEEEEEEECSSCEEEEEEETTCEEEEHHHHHHHHSSCCCSCCSHHHHHHHHTCCCCCCCSSCGGGHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCCEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHH
T ss_conf 44423785079998512554011035640002899998753023210005678888751466557555999987494686
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------8
Q 001738 683 ------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~Y~~~D~~L~~~L~~kl~~i~~~~~~a~~~~v~~~~v~~q~~~~~~li~~~~~~ 375 (375)
T d1ih7a1 321 ISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKE 375 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSCGGGGGCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6520998999999999872899999999987959899738999999999999529
|
| >d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=28259.06 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 80 (375)
T d1o4sa_ 1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGE 80 (375)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 94546548977899999999999977998589989588997889999999999855876889986789999999864332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (375)
T d1o4sa_ 81 RYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG 160 (375)
T ss_dssp HHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 15655433323346728999999999981899989982586543102321122222233344332356136777775235
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~ 240 (375)
T d1o4sa_ 161 KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 240 (375)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCC
T ss_conf 76379981899885577999999999986887098124674003001333332112355778978999405142058866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~~ 320 (375)
T d1o4sa_ 241 RVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKV 320 (375)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEC
T ss_conf 44543233331012232212344333320002334321121023678889999999987874495685689407999979
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------8
Q 001738 683 ------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl~~~l~~ 375 (375)
T d1o4sa_ 321 RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNS 375 (375)
T ss_dssp SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 9997999999998599999976115899969999728999999999999999659
|
| >d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Pyruvate phosphate dikinase, N-terminal domain domain: Pyruvate phosphate dikinase, N-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=28261.87 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~k~v~~f~e~~~~d~~lvGGK~AnLgel~~~G~pVP~GFviTt~Ay~~Fl~~n~~~~~~l~~~i~~~l~~l~~~~~~~~~ 80 (375)
T d1kbla3 1 AKWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFG 80 (375)
T ss_dssp CCCEEEGGGCCGGGHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSCBT
T ss_pred CCEEEECCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 97789887799023643828899899999783998998885099999999826657487999999999866643275446
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (375)
T d1kbla3 81 DTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKE 160 (375)
T ss_dssp CSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 54320121010013432100014676630350456667651343233211310255542000011015678888876653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~q~~~~~~a~gv~~t~~~~~~~~~~~~i~~~~glg~~vv~ 240 (375)
T d1kbla3 161 EKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQT 240 (375)
T ss_dssp HTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGGGCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEC
T ss_conf 04337777767888999999999999875148865553024445530146773146655554420341466666630102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~eLa~~a~~iE~~yG~PqD 320 (375)
T d1kbla3 241 MVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQD 320 (375)
T ss_dssp CCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSSCCEEGGGHHHHCHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 21057774226641245675444321122000013466642431226654431321808999999999999998199614
Q ss_pred ------------------------------------------------------C
Q ss_conf ------------------------------------------------------8
Q 001738 683 ------------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------------~ 683 (1019)
-
T Consensus 321 IEWAi~dG~l~ILQaRPv~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T d1kbla3 321 MEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL 375 (375)
T ss_dssp EEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHHHHSCGGGGGGG
T ss_pred EEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCC
T ss_conf 6999999989999766788657869999999998699799999872794211229
|
| >d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Galactose mutarotase-like family: MdoG-like domain: Glucans biosynthesis protein G (MdoG, OpgG), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=28192.86 Aligned_cols=1 Identities=0% Similarity=-0.892 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 F~f~~l~~~Ar~lA~~py~~p~~~lP~~l~~L~Yd~yr~Irf~~~~alW~~~~~~f~v~~fh~G~~f~~pV~i~~V~~g~ 80 (374)
T d1txka2 1 FSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA 80 (374)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCCCCCCCC----CHHHHTTCEECGGGCBTTTSSCSCEEEEEECBTTBCSCBEEEEECSSC
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCE
T ss_conf 98799999999985189889876689878729998971636486521105799998787627876679877999970995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~i~fd~~~F~y~~~~~~~~~~~~~GfAGFRl~~pln~~~~~de~~~FlGASYFRavg~g~~YGlSARGLAIdTa~~~g 160 (374)
T d1txka2 81 VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSG 160 (374)
T ss_dssp EEECCCCGGGEECTTSCCCTTTSTTCCEEEEEEEECSSCTTCCEEEEEEESTTEEEECCTTCCCCCEEESCEESTTCTTC
T ss_pred EEEEECCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHEEEECCCCCCCCCHHHEECCCCCCCC
T ss_conf 68810188996678877784556678730599963467887443167771620224534897366311010005799987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 EEFP~F~~FWle~P~~~~~~~~vyALLDspSvtGAYrF~i~PG~~t~~dV~a~Lf~R~~v~~lGiAPLTSMf~~ge~~~~ 240 (374)
T d1txka2 161 EEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPS 240 (374)
T ss_dssp CBCCEEEEEEEECCCTTCCCEEEEEEEEETTEEEEEEEEEECSSSEEEEEEEEEEESSCCSCEEEEEEEECEEEBTTBCC
T ss_pred CCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCC
T ss_conf 67987748996657899976999999239741007999997599889999889980676121350211365306898899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~dD~RPeVHDSDGL~i~~g~GE~iWRPL~NP~~l~~S~f~d~~p~GFGLlQRdR~F~~YqD~ea~Ye~RPSlWVeP~gd 320 (374)
T d1txka2 241 PANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGE 320 (374)
T ss_dssp SSCCSCSCEESCCEEEEECTTSCEEEEECCCCSSCEEEEEEEESCCEEEEECCCCCGGGTCCTTTCGGGCCEEEEEESSC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCEECCCCHHHHCCCHHHHCCCCEEEEEECCC
T ss_conf 88987875525664379737996782368898862175675589863233613777232306413233487378876676
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 WG~G~V~LvEIPT~~E~~DNIVAfW~P~~~~~~G~~~~f~Yrl~W~~~~p~~h~ 374 (374)
T d1txka2 321 WGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHA 374 (374)
T ss_dssp CCEEEEEEEECCCSCTTSCCEEEEEEESCCCCTTCEEEEEEEEEEESCGGGGSC
T ss_pred CCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 778679999768997243658999767887899996989989974789876679
|
| >d1ioma_ a.103.1.1 (A:) Citrate synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28186.33 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 v~rGL~Gv~v~eS~Is~IDg~~G~L~YRG~~i~dLa~~~sfEEVa~LL~~G~LP~~~el~~f~~~l~~~~~lp~~~~~~l 80 (374)
T d1ioma_ 1 VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESF 80 (374)
T ss_dssp CCGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99888998485655636748988899988559998703999999999978969799999999999997047988898999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~p~~~~pm~~l~~~vs~l~~~~~~~~~~~~~~~~~~~~~lia~~~~i~a~~~~~~~g~~~~~p~~~~s~a~n~l~m~~ 160 (374)
T d1ioma_ 81 KRYPVSAHPMSFLRTAVSEFGMLDPTEGDISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMAN 160 (374)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHTCTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 85343421157777766652125752223310689999998624305788899998469877788603679999877623
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~p~~~~~~~l~~~lvl~aDHg~n~St~aaR~~aSt~~d~~~av~agl~al~GplhGga~~~~~~~l~e~~~~~~~~~~ 240 (374)
T d1ioma_ 161 GVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREW 240 (374)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHEEEECCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
T ss_conf 89999899999875613452588765122422554058747788888887337866786528999999850675354999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 v~~~l~~~~~i~GfGH~vy~~~DPRa~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~pNvd~~~~~l~~~l 320 (374)
T d1ioma_ 241 VREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDL 320 (374)
T ss_dssp HHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 99998678877776764333553237999999998776427722789999998432430266898878689999999984
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 Gip~~~~~~lf~i~R~~Gw~AH~~E~~~~~~~l~RP~~~Y~G~~~r~~~p~~~R 374 (374)
T d1ioma_ 321 GFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR 374 (374)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSSCCCCCGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 988565559999999999999999998557985277540069999988676669
|
| >d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Aminotransferase homolog WlaK (PglE, Cj1121c) species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=28183.49 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~e~~~~~~~l~~~~~~~~G~~~~~fE~~~~~~~~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~ 80 (374)
T d1o69a_ 1 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICY 80 (374)
T ss_dssp CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 93899999999639807899899999999999978295999678799999999986988839999499661743799843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~~~aii~~~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~ 160 (374)
T d1o69a_ 81 LKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGT 160 (374)
T ss_dssp TTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEECCEECCC
T ss_conf 44505734665321012123342100001233201111133310336888987651694410222342145678840688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~gd~~~fSf~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~~~i~~ 240 (374)
T d1o69a_ 161 FGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLK 240 (374)
T ss_dssp SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 77557894257646534665222133689998530222233333333333458864244624566667777665431004
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~ 320 (374)
T d1o69a_ 241 KREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPL 320 (374)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 67899998864024323333456787773140233034433224310000000010001210999999999879987873
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk 374 (374)
T d1o69a_ 321 WKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 374 (374)
T ss_dssp CCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHCHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 854342966534787899899999839898969887799999999999999979
|
| >d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NagB/RpiA/CoA transferase-like superfamily: NagB/RpiA/CoA transferase-like family: IF2B-like domain: Initiation factor 2b species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=0 Score=28183.08 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~l~si~~~~~~v~ilDQ~~LP~~~~~~~~~t~~~v~~AIk~M~VRGAPaIgvaaA~glala~~~~~~~~~~~s 80 (374)
T d2a0ua1 1 MSKPHHATLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAANGELKS 80 (374)
T ss_dssp CCCCSSCCCCSEEEETTEEEEECTTTTTTCCCEEEECSHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99887895016999699999985788998179999699999998856370259429999999999999985222753001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~el~~~L~~a~~~L~~sRPTAVNL~nAv~rv~~~i~~~~~~~s~~e~~~~ll~~A~~i~~eD~~~n~~Ig~~Ga~li~e 160 (374)
T d2a0ua1 81 GREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILA 160 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHHHHHHHSCTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999985597542256899999999864287778999999999999999999999999999978999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~ilThcn~g~Lat~~~gtal~~i~~a~~~gk~~~V~v~EtRP~~qG~rlta~~L~~~gi~~t~i~Dsa~~ 240 (374)
T d2a0ua1 161 AAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAAS 240 (374)
T ss_dssp HHHHTTCSSEEEEECSCCSTTTSSSSCSHHHHHHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHH
T ss_pred HHHHCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCHH
T ss_conf 88621788732676416753375113224677678997698617998046433464689999998616771899545256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~m~~~~v~~VivGad~v~~nG~v~nkiGT~~~A~~A~~~~vP~~v~a~~~k~~~~~~~~~~i~ie~r~~~ev~~~~~~~ 320 (374)
T d2a0ua1 241 SLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTNLVTK 320 (374)
T ss_dssp HHHHHSCCCEEEECCSEECTTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBCTTTC
T ss_pred HHHHCCCEEEEEECCEEEEECCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 66205642589852318984697886246499999999749988999115642767799775646678967734334566
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~v~np~fD~tP~~lIt~~iiTe~G~~~P~~~~~~~~~~~~~~~~ 374 (374)
T d2a0ua1 321 QRVVADGPHLSIWNPVFDITPSELITGGIITEKGVQAPAASAPYYDIASIIAQA 374 (374)
T ss_dssp CBCSCCCTTEEECCBSEEEECGGGCCSEEECSSCEECCCSSSSCCCHHHHHHCC
T ss_pred CEECCCCCCCCEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 120257888602486831789699499788889861655467721479896239
|
| >d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Hect, E3 ligase catalytic domain superfamily: Hect, E3 ligase catalytic domain family: Hect, E3 ligase catalytic domain domain: WW domain-containing protein 1, WWP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28182.97 Aligned_cols=1 Identities=0% Similarity=-0.693 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~f~~~~~~~~~~~~~~i~V~R~~l~~d~~~~l~~~~~~~l~~~l~V~F~gE~g~D~GG~~rEff~~l~~el 80 (374)
T d1nd7a_ 1 HMGFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEV 80 (374)
T ss_dssp CCTHHHHHHHHHHHHHHTCCSSEEEEEECTTTHHHHHHHHHHTSCGGGGGSEEEEEETTTCCCCCTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 96378999999988761689885599976565899999999716989847876999789874478711999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~p~~~lf~~~~~~~~~~~~~p~~~~~~~~~~~f~~lG~lig~al~~~~~~~~~f~~~f~k~Llg~~~t~~DL~~iD~~~ 160 (374)
T d1nd7a_ 81 LNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEF 160 (374)
T ss_dssp TCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHHHHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHH
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCHHH
T ss_conf 08866875664798855355874436805899998857999999984961387756899988549989899998857898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~sl~~l~~~~~e~~~l~l~f~~~~~~~~~~~~~eL~~~G~~~~VT~~N~~~yv~~~~~~~l~~~~~~~~~afr~Gf~~v 240 (374)
T d1nd7a_ 161 YNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEV 240 (374)
T ss_dssp HHHHHHHHSSCSCSSCCCCBSEECCCSSTTCCCEESSTTGGGCBCCTTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 87499998546410466035787751278742254478997652068789999999999997211789999999869876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ip~~~l~~f~~~eL~~licG~~~id~~~l~~~~~y~gy~~~s~~i~~fw~vl~~~t~ee~~~fL~FvTGs~rlP~~G~~~ 320 (374)
T d1nd7a_ 241 VPLQWLQYFDEKELEVMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAE 320 (374)
T ss_dssp SCGGGGTTCCHHHHHHHHHCCCCCCHHHHHHTEEEESCCTTSHHHHHHHHHHHHSCHHHHHHHHHHHHSCSCCCTTCGGG
T ss_pred CCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCCHHH
T ss_conf 79898764889999986279987788999643261367899889999999877069999987446636899889864565
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 l~~~~~~~~~~i~~~~~~~~LP~A~TCfn~L~LP~Yss~e~l~ekL~~AI~~~e 374 (374)
T d1nd7a_ 321 LMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374 (374)
T ss_dssp CEETTEECCEEEECCSCTTSCCEEEGGGTEEECCCCSSHHHHHHHHHHHHHSCC
T ss_pred HCCCCCCCCEEECCCCCCCCCCCHHHHHCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 435678875131468999999705440267669898899999999999997149
|
| >d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Morphinone reductase species: Pseudomonas putida [TaxId: 303]
Probab=100.00 E-value=0 Score=28181.18 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~P~LF~Pl~Ig~~~lkNRiv~apm~~~~~~dg~~t~~~~~yy~~rA~gGlii~e~~~V~~~~~~~~~~~~i~~d~~ 80 (374)
T d1gwja_ 1 TSFSNPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQ 80 (374)
T ss_dssp CCCCCCCTTSCEEETTEEESCSEEECCCCCCCCSSSCCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCBTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEEECCEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 99994999998418998978875874458988999998799999999984878799974798886578889873555554
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ 160 (374)
T d1gwja_ 81 EAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDGIPG 160 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 15666689998605862676554168655545588887100035556667655443565544567878860049999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ii~~f~~AA~rA~~AGfDgVEIH~ahGYLl~qFLSp~~N~RtDeYGGSlENR~Rf~~EIi~aIR~~vg~~~v~~r~~~~~ 240 (374)
T d1gwja_ 161 IVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFL 240 (374)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 99999999999998099888732220346778887535764454343121100567889998998838753225553100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~ld~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~ae~~l~~g~aD 320 (374)
T d1gwja_ 241 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTAD 320 (374)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHTCSEEEEECSCBTTBCCCCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCC
T ss_conf 23687653247888876413110472277751576457886524999999998738878997895999999999869974
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 lV~~gR~~iadPd~~~K~~~G~~l~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~ 374 (374)
T d1gwja_ 321 AVAFGRPFIANPDLPERFRLGAALNEPDPSTFYGGAEVGYTDYPFLDNGHDRLG 374 (374)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCCCCCCCSSCCCC
T ss_pred EEHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHCC
T ss_conf 844669998792299999759988888841125799988387888542235319
|
| >d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: ERO1-like superfamily: ERO1-like family: ERO1-like domain: Endoplasmic oxidoreductin 1, Ero1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28180.56 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~s~~~vd~~N~~i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~~ 80 (374)
T d1rp4a_ 1 GSFNELNAINENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDTM 80 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 97878999899988999986378960434338899898999432574998998803775565861024101046664112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~~~~ 160 (374)
T d1rp4a_ 81 KEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFTIGE 160 (374)
T ss_dssp EECCTTCGGGSBHHHHSSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCCTTS
T ss_pred HHCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 21145653002204033320355554431101334456777754766300856235888873788999999975789876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~~~~ 240 (374)
T d1rp4a_ 161 TGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLPEFS 240 (374)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHSEEETTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCCCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 43107788999988888888999998764167767637899999999736838889899999999999998888886467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~l~~~~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV~CeKCrLwGKlQt~GlgtALKIL 320 (374)
T d1rp4a_ 241 FCDLVNKEIKNKMDNVISQLDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCVQCDRCRLWGKIQTTGYATALKIL 320 (374)
T ss_dssp TTSSTTTTHHHHHHHHHHTTCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 77877789999999999871666678888538841399999999999999999716676376756899887799999998
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 f~~~~~~~~~~~~~~~~L~R~ElvALiNt~~rlS~SI~~v~~F~~m~~~~~~~~ 374 (374)
T d1rp4a_ 321 FEINDADEFTKQHIVGKLTKYELIALLQTFGRLSESIESVNMFEKMYGKRLLER 374 (374)
T ss_dssp HHHHTCCHHHHHHHHHTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 535553346766664554599999999999999999999999999999764129
|
| >d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28180.25 Aligned_cols=1 Identities=200% Similarity=1.865 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~DPR~iLkk~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (374)
T d2bvca2 1 SRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPNRGYKVRHKG 80 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTBGGGTTCSBCTTSCBCCCCCBCTTC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98869999999999997799870357726589997145445566776201363000246787656788887786656566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~~l~~~Gi~~~~~~~E~~~~gQ~Ei~~~~~~~l~aAD~~~~~k~~ik~vA~~~G~~atFmp 160 (374)
T d2bvca2 81 GYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMP 160 (374)
T ss_dssp CSCBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCS
T ss_pred CEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 50002000226899999998787469763763215666825887067630668999999999999999986397477764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 KP~~~~~Gsg~H~h~Sl~~~~~n~~~~~~~~~~lS~~~~~~iaGlL~h~~~l~al~~P~vNSY~Rl~~~~~ap~~~~Wg~ 240 (374)
T d2bvca2 161 KPLFGDNGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQ 240 (374)
T ss_dssp CSSTTSCCCCEEEEEEEEETTEECSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSTTHHHHSSTTSSSCSBCCEEE
T ss_pred EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECC
T ss_conf 31567887660079974158988655566655567999999999985209888987378742653489875644774046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~nR~~~iRi~~~~~~~~~~riE~R~~da~aNPYL~lAailaagl~Gi~~~l~p~~p~~~~~~~~~~~~~~~~~~LP~sl~ 320 (374)
T d2bvca2 241 RNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAASIPQTPTQLS 320 (374)
T ss_dssp TCTTSSEEECCCCSCTTSCCEEECSCCSSSCHHHHHHHHHHHHHHHHHTTCCCCCCCCSCGGGCCHHHHHTSCBCCSSHH
T ss_pred CCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHH
T ss_conf 76655311024468975626885278833107899999999866656412344687778513299657658132501799
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 eAl~~l~~d~~~~~~~~~~g~~~i~~y~~~Kr~~E~~~~~~~vt~wE~~~Y~~~ 374 (374)
T d2bvca2 321 DVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEFALYYDV 374 (374)
T ss_dssp HHHHHHHHCCHHHHGGGSSCHHHHHHHHHHHHHHTHHHHHTSCCHHHHHHHTTC
T ss_pred HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
T ss_conf 999999759787876563789999999999999999999689999999604899
|
| >d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Sialidase 2 (Neu2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28176.04 Aligned_cols=1 Identities=0% Similarity=-1.058 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~p~~~~~~~f~~g~~~yRiP~lv~~~~g~~l~A~a~~r~~~~d~~~~~iv~~rS~D~G~T~~~~Ws~~~~v~~~~~~~~~ 80 (374)
T d1so7a_ 1 LPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARLDGHR 80 (374)
T ss_dssp CCCSEEEEEEECTTCCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEGGGTEEEECCCEECTTSCCTTEE
T ss_pred CCCCCEEEEEECCCCCEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCE
T ss_conf 99431267768895368647799985999999999687677668987699999637883043466798994778989955
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~p~~~~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~p~~i~~~~~~~~~~~~~~~~~~~~~ 160 (374)
T d1so7a_ 81 SMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGH 160 (374)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCEECHHHHHGGGGGGEEEEEECSSC
T ss_pred EEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 56212789899997999998506877653224688885408999688886335686026610145435774366520233
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~e~~~~e~~~~~~~~~~~~~~~~~~~r 240 (374)
T d1so7a_ 161 CLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRAR 240 (374)
T ss_dssp CEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCCCSBSEEEEEEEEEEC--CEEEEEEEEESSSEE
T ss_pred CEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE
T ss_conf 12664048868866676516766678971499999358754110156568888422588851456643677425478967
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~S~D~G~tW~~~~~~~~l~~~~~~~~~~s~i~~~~~~~~~~~~~~~ll~~~p~~~~~r~~~~l~l~~S~D~G~tW~~ 320 (374)
T d1so7a_ 241 VQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSE 320 (374)
T ss_dssp EEEEESSTTSSCCCCEEEEEEECCTTTCCCCEEEEEECCCC----CSEEEEEEEECCSSSSEEEEEEEESSTTCGGGCCC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEECCC
T ss_conf 99996279966543202333448888885314898335434444688369983788988887608999998889916478
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~i~~g~~~YS~~~~~~dg~~~~~~i~~lyE~~~~~~i~f~~~~l~~~~~~~~ 374 (374)
T d1so7a_ 321 PVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAEY 374 (374)
T ss_dssp CEEEEEEEEEEEEEEEEEECTTSSEEEEEEEEETTTTEEEEEEEEHHHHCGGGC
T ss_pred CEEECCCCCCCCHHEECCCCCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCCCC
T ss_conf 548688997684525867998885699999956997657999989999175779
|
| >d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B {Arthrobacter sp., tad20 [TaxId: 1667]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Psychrophilic chitinase B species: Arthrobacter sp., tad20 [TaxId: 1667]
Probab=100.00 E-value=0 Score=28173.56 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~g~rvvgYy~~W~~y~r~~~~~~l~~~i~~~~lTHi~YAFa~i~~~~~~~~~~~~~~~~~~~g~~~~~d~~~d~ 80 (374)
T d1kfwa1 1 PLTSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDGAGDAWADF 80 (374)
T ss_dssp CCBSSBTTBEEEEEEEGGGGSTTCCCHHHHHHTSCGGGCSEEEEEEECBCTTTCSBCCCEECCCSSTTTTTTCEEHHHHH
T ss_pred CCCCCCCCCEEEEEECCCEECCCCCCHHHCCCCCCHHHCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 98888888789999895400588898634767798524987999123014875532024311134778752347606541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lK~~~p~lKvllSiGGw~~s~~F~~~a~~~~~R~~Fi~s~v~~~~~~~l~ 160 (374)
T d1kfwa1 81 GMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLP 160 (374)
T ss_dssp TCCCCTTTSSSSSCCCTTCSCCHHHHHHHHHHTTCTTCEEEEEEECSSSCTTHHHHTSSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 33334444456655653321013689999998618997599998189877763111047889999999999999981975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~FDGiDiDWEyP~~~~~~~~~~~~~~~D~~nf~~Ll~eLR~~ld~~~~~~~k~~~Ls~A~~~~~~~~ 240 (374)
T d1kfwa1 161 NFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADI 240 (374)
T ss_dssp EETTEEETTTTTTTCCEEEEECSCTTSSCSSTTCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
T ss_conf 21111232233244663011226514446777777887648999999999999999987563575389999852540011
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~d~~~i~~~vD~invMtYD~~G~w~~~~tg~~apLy~~~~~~~~~~~~~svd~aV~~~~~~Gvp~~KlvlGipyd~ 320 (374)
T d1kfwa1 241 DAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPKQLGLGLAADN 320 (374)
T ss_dssp HHHTTTCGGGGGTCSEEEECCSCSSCTTSTTBCCCSSCSSCCTTCCSCGGGCCCHHHHHHHHHHTTCCGGGEEEEEESCC
T ss_pred CCCCCCHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCHHHEEEEECCCC
T ss_conf 23473266452004799997144046789987776675779977877777770699999999987999899389846799
Q ss_pred -----------------------------------------------------C
Q ss_conf -----------------------------------------------------8
Q 001738 683 -----------------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~si~~K~~y~~~~glgG~m~W~~~~D~~g~Ll~a~~~~l~~~~~~~~~~~~p~ 374 (374)
T d1kfwa1 321 IATTKQKTDYIVSKGLGGGMWWELSGDRNGELVGAMSDKFRAAAPGPVTEAAPP 374 (374)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECGGGCTTCHHHHHHHHHHHHSSCCSCCCBCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999998569953999975579997499999998458899987788998
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=0 Score=28106.70 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~d~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQFP 80 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99899989688999999999868998999958998858668954299899538658727887999999983885212332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1seza1 81 LSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPF 160 (373)
T ss_dssp SSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHCHHHHHTTHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCCHH
T ss_conf 11233212244333221122134442122211355566788887642000000111000000012223432001011012
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~ 240 (373)
T d1seza1 161 VAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKD 240 (373)
T ss_dssp HHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 21010233110025567899987641001445567876404322222101234333203540453034612799999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~~~~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~D~Vi~a~p~~~l~~l~~~~~~~~~~~~~~~~~~~~ 320 (373)
T d1seza1 241 LREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVYGH 320 (373)
T ss_dssp SCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCCT
T ss_pred HCCCEEECCCEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEECCEEEECCCHHHHHHCCCCCCCCCCCHHHHCCCCCC
T ss_conf 50655764987899999678542113552786124789746998899999986577653365557775332330100245
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~~~~~~~~t~~pglf~aGd~~~g~~~~~A~~~G~~aA~~i~~~L~~~~ 373 (373)
T d1seza1 321 NYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVISYLESVS 373 (373)
T ss_dssp THHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 78867626423478999999972578765399999999999999999875289
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=28106.22 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~MkkI~~v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~ 80 (373)
T d1v4va_ 1 GMKRVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQA 80 (373)
T ss_dssp CCEEEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99769999873697999999999997189998899992688255637122408886656787888887789999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~ 160 (373)
T d1v4va_ 81 ARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLK 160 (373)
T ss_dssp HHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHH
T ss_conf 66664037640011136753103778898762122241343455433567616666655223443255122156666666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~ 240 (373)
T d1v4va_ 161 EGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVV 240 (373)
T ss_dssp TTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHH
T ss_pred HCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 30454213442662155777654311000223445531688426555312789999999986533565035640342221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~nvlv~~d~~~ 320 (373)
T d1v4va_ 241 REAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEG 320 (373)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECCSCHHH
T ss_pred HHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCEEEECCCCHHHHCCHHHCCCEEEECCCCCCHHHHHCCEEEECCCCHHH
T ss_conf 03555543033320011100078888876430168506412222003205868984887669878962904975899999
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
.
T Consensus 321 I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~~~L~~~~~~~~~~~~~~~ 373 (373)
T d1v4va_ 321 VYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVAWRLGLGPRPEDWLP 373 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHHHHTTSSCCCCCCCC
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999719898864024889898987999999999998489989878899
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=100.00 E-value=0 Score=28104.82 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~a~~~~~~~~~a~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~~~a~SpDG~~l 80 (373)
T d2madh_ 1 SSASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEF 80 (373)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEE
T ss_conf 90565434310132145678986563018999789997342257876599998999979999957988607986899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~ 160 (373)
T d2madh_ 81 ALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD 160 (373)
T ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEE
T ss_conf 99960577532124531899997778938889726885136851689708998589937999986987467762368728
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 240 (373)
T d2madh_ 161 DQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQAD 240 (373)
T ss_pred EEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 99824520699962899199999479939999747742667886300366753043458878994299925896599997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~ 320 (373)
T d2madh_ 241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV 320 (373)
T ss_pred CCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 68990789776305647578664136741335771499759995488824786258986999989999698986689982
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~~~~ 373 (373)
T d2madh_ 321 DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMNEA 373 (373)
T ss_pred EEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCC
T ss_conf 58999989998999996799929999999998999988889898189984689
|
| >d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain {Penicillium minioluteum [TaxId: 28574]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Dextranase, catalytic domain domain: Dextranase, catalytic domain species: Penicillium minioluteum [TaxId: 28574]
Probab=100.00 E-value=0 Score=28104.07 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~ga~p~~~~d~t~a~~~a~~~~~~~~~~~vvy~PpG~y~~g~~~~~~~~~~~~~g~~l~~~~~~~y~~~G~~~~~~i~ 80 (373)
T d1ogmx2 1 LPSGMIPHMTPDNTQTMTPGPINNGDWGAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKGAIE 80 (373)
T ss_dssp CCGGGSCCCCTTTEEECCSEEECTTTTCSSSEEEECSEEEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEESCEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCEEECCCEEEECCCEEECCCCEEEECCCCCEEEEEEE
T ss_conf 98886589898846875310465244689888998994638387430474588738669636743776079857986798
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~nv~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~n~~i~giti~~s~~~~~~~~~~~~v~i~ 160 (373)
T d1ogmx2 81 YFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQ 160 (373)
T ss_dssp ECCSSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEESCCCSSEEEEEESCEEECCSSCCEEECSSSCEEEE
T ss_pred ECCCCEEEEECCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEEEECCCEEEEEECCCCEEEEE
T ss_conf 63765089971207838866632566543223346776567755899984227999677997899169987268759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~i~~~~~~~~n~dgi~~~~~~~i~~~~~~~gDD~i~~~s~~i~v~n~~~~~~~~~~~~~~g~~g~~i~nv~v~ni~v~ 240 (373)
T d1ogmx2 161 ISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVI 240 (373)
T ss_dssp EEEEEEECCCSTTCCCCBCCTTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 78999668877787005324878999528963887799657988999799978875247883667887631599915998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ni~f~nI~~~~~~~~~i~~~~~~~~~~~~i~nV~i~nI~~~~~~~~ 320 (373)
T d1ogmx2 241 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGT 320 (373)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEEEEEEEEEEECSSBCEEEEECCSEEEEEEEEEEEEETTCBCCSTTCT
T ss_pred CCEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCC
T ss_conf 85611220033434443322112100689869992899919998753676999876788888332189984499804571
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~Ni~i~~~~i~~~n~~~~~~~~~~~~g~~~~~~~~~ 373 (373)
T d1ogmx2 321 GESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSYWGEWQIS 373 (373)
T ss_dssp TCEEECCCTTCCEEEEEEEEEETTEECCTTTCSTTSSSCEEECGGGTTTCEEC
T ss_pred EEEEEECCCCCCCCEEEECEEEECEEEECCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 66875014687388578676991969864777777321678777504531229
|
| >d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Amide receptor/negative regulator of the amidase operon (AmiC) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=0 Score=28103.50 Aligned_cols=1 Identities=0% Similarity=0.470 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~pvIG~~~p~tG~~a~~G~~~~~g~~lAv~~iN~~GGi~Gr~i~l~~~D~~~~~~~a~~~a~~Li~~~~V~aiiG~~~S~ 80 (373)
T d1qo0a_ 1 RPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSH 80 (373)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHTTCBTTBCCEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHH
T ss_conf 98899972886842655299999999999998850996886889999769999999999999999608966998041333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~av~~~~~~~~vp~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~~vaii~~d~~~g~~~~~~~~~~~~~ 160 (373)
T d1qo0a_ 81 TRKAVMPVVERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQ 160 (373)
T ss_dssp HHHHHHHHHHHHTCEEEECSCCCCCCCCTTEEECSCCGGGTHHHHHHHHHHHSCSEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf 24456899997199678223354345687336604671787777888987515742553467764037888653111220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~G~~vv~~~~~~~~~~~~d~~~~~~~i~~~~pd~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (373)
T d1qo0a_ 161 HGGTVLEEIYIPLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDV 240 (373)
T ss_dssp TTCEEEEEEEECSSCCHHHHHHHHHHHHHHTCSEEEEECCSTTHHHHHHHHHHHHCSSCCCCEEESSCCHHHHTTSCHHH
T ss_pred CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 36733678971676442046799999875188732320235047779999998457656640125545248776444443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~aY~a~~~~a~Ai~~ag~~d~~~i~~aL~~~~~~~~~G~ 320 (373)
T d1qo0a_ 241 AEGQVVVAPYFSSIDTPASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGNWRVEDVQRHLYDIDIDAPQGP 320 (373)
T ss_dssp HTTCEEEESCCTTCCSHHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHSSCCEEETTEE
T ss_pred HCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECCCEE
T ss_conf 05720102442000027789999999987398788770799999999999999998689999999999855953078365
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
.
T Consensus 321 i~f~~~~~~~~~~~~i~q~~~dg~~~vv~~~~~~v~p~p~~~~~~~~~w~~~~ 373 (373)
T d1qo0a_ 321 VRVERQNNHSRLSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASM 373 (373)
T ss_dssp EEECTTTSBEEBCCEEEEECTTSCEEEEEECSSCBCCCTTCCSCCGGGGGGGC
T ss_pred EEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99838998346866999993699589996069836799974888865455569
|
| >d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Plasmepsin (a hemoglobin-degrading enzyme) species: Plasmodium vivax [TaxId: 5855]
Probab=100.00 E-value=0 Score=28103.33 Aligned_cols=1 Identities=0% Similarity=-0.793 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~iGtP~Q~~~v~~D 80 (373)
T d1miqa_ 1 HLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFD 80 (373)
T ss_dssp CEEEEEEEECHHHHHHHHSCHHHHHHHHHHHHHHHTTSCTTCCCCCBTTBCCCGGGTBCEEEECCCEETTTTEECCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEE
T ss_conf 92233303582467787766666889887644331134232122256787687255169789999998799989999997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 TGSs~lWv~~~~C~~~~c~~~~~y~~~~SsT~~~~~~~~~~~y~~G~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~ 160 (373)
T d1miqa_ 81 TGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPI 160 (373)
T ss_dssp TTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGTTH
T ss_pred CCCHHEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCC
T ss_conf 99625189879999743468982389889853388963899928817999999788897674267668999840356753
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~g~l~~Gg~d~~~~~g~~~~~pv~~~~~w~ 240 (373)
T d1miqa_ 161 YSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQ 240 (373)
T ss_dssp HHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCHHCCCEEEEEECCCCCEEE
T ss_conf 23566563566444433578854301124443225653278871367888715642677830114424687114552489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~P~itf~f~g~~~~l~p~~y~ 320 (373)
T d1miqa_ 241 IDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYM 320 (373)
T ss_dssp EEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSE
T ss_pred EEEEEEECCEECCCCCEEECCCCCEECCCHHHHHHHHHHHCCEECCCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEE
T ss_conf 99998778675487416862677213157899999999839755068970675344688863999999999998889906
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak~ 373 (373)
T d1miqa_ 321 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN 373 (373)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCEEEEEEEECCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECCC
T ss_conf 88996799899999998888999899717943769999999999999998079
|
| >d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=28101.04 Aligned_cols=1 Identities=0% Similarity=-0.228 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~s~~~~~~l~~~~~dwa~~hGl~~~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~n~L~~~vS~D~~~~~~f 80 (373)
T d1m0wa2 1 PSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFNELYARITQDMAQPDSY 80 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCEECCTTGGGCTTEEEECCEESSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf 98799999999999999971947436877789886145787952776888999999999999999999997240426899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 L~~~l~~~~~~D~~Ft~~L~~i~~~v~~~g~~~~q~i~Lgl~RSDYMld~~~~~~~~KQVE~NTIa~sfg~ls~~v~~lH 160 (373)
T d1m0wa2 81 LHKTTEALALSDSEFTGKLWSLYLATLKSAQYKKQNFRLGIFRSDYLIDKKKGTEQIKQVEFNTVSVSFAGLSEKVDRLH 160 (373)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHTSCCSSCCCCCEEEEEEEEEEEEEETTEEEEEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHH
T ss_conf 99998767405889999999999999854446243258744301321477666523441230020020121888999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~l~~~~~~d~~~~~~~d~~~~~~~~~~~le~~~a~~~~~~l~g~KKvQq~La~pgvLe~Fl~d~~~~~~lr~tF~~ly~ 240 (373)
T d1m0wa2 161 SYLNRANKYDPKGPIYNDQNMVISDSGYLLSKALAKAVESYKSQQKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYP 240 (373)
T ss_dssp HHHHHTTSSCTTSCSSCGGGBCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHTTSHHHHTTTCCCHHHHHHHHTTCCCEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 99985557788775016886545155189886666466776467652672103668898867988999999998504786
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 Ld~~~~g~~~~~~Al~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~e~~ayILMerI~Pp~~~~~~~~r~~~~~~~~ 320 (373)
T d1m0wa2 241 LDDTKLGREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIILRDNKSYNEP 320 (373)
T ss_dssp CSSSHHHHHHHHHHHHCGGGEEEEESSCSSCCCEEGGGHHHHHHTSCGGGGGGEEEEECCCCCCBCSCCEEETTEEECCC
T ss_pred CCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECC
T ss_conf 78502128999998619153897455557665401479999987478444113307854179988875997299011277
Q ss_pred ----------------------------------------------------C
Q ss_conf ----------------------------------------------------8
Q 001738 683 ----------------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~vSELGifG~~l~~~~~v~~N~~~G~LlRTK~~~~nEGGVaaG~g~lDS~~L~ 373 (373)
T d1m0wa2 321 IISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGCLDSIILY 373 (373)
T ss_dssp BEEEEEEEEEEEECSSCEEEEEEEEEEEEEECCEEETTEEEECCEEECCEEEC
T ss_pred EEECCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCEECCEEECCCHHCC
T ss_conf 32033041899978977997165028896279988876810354223422009
|
| >d1r5ya_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Queosine tRNA-guanine transglycosylase species: Zymomonas mobilis [TaxId: 542]
Probab=100.00 E-value=0 Score=28032.51 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~Fei~~~d~~AR~G~L~~~~g~i~TP~fmpv~t~g~v~~ltpd~l~~~g~~~il~Ntyhl~~~pg~~~i~~~gglh 80 (372)
T d1r5ya_ 1 RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGTAATVKALKPETVRATGADIILGNTYHLMLRPGAERIAKLGGLH 80 (372)
T ss_dssp CCSCEEEEEEEETTEEEEEEEETTEEEEESEEECBCTTSSCTTCCHHHHHHTTCSCEEEEHHHHHHTTCHHHHHHTTCHH
T ss_pred CCCEEEEEEECCCCEEEEEEEECCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHCCCHH
T ss_conf 99607999965585004899979977679978754778808847999999728988833188887587617877426513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~f~~~~~~iltdsGg~q~~sl~~~~~~~~~gv~f~s~~~g~~~~ltpe~~i~~q~~ig~DI~~~Ldd~~~~~~~~~~~~~ 160 (372)
T d1r5ya_ 81 SFMGWDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECTPYPATPSRAAS 160 (372)
T ss_dssp HHHTCCSCEEEECSHHHHC-CC-CCEEETTEEEC---------CBCHHHHHHHHHHHTCSEEECCCCCCCSSCCHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 34204565200247654323223455577885353226872111000779999985088467522446653101678899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~rt~~w~~~~~~~~~~~~~~~~~~~lfgivqGg~~~dlR~~s~~~l~~~~~~G~aiGgl~~~~~~~~~~~~v~~~~~~ 240 (372)
T d1r5ya_ 161 SMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAVGEGQDEMFRVLDFSVPM 240 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999999999999875055667666321131541265688889999986213732122445675067788899850200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 Lp~~kPr~l~Gvg~P~~il~~V~~GvD~FD~~~p~r~Ar~G~alt~~g~~~l~~~~~~~d~~Pl~~~C~C~~C~~~sraY 320 (372)
T d1r5ya_ 241 LPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAY 320 (372)
T ss_dssp SCTTSCEEETTCCSHHHHHHHHTTTCCEEECSHHHHHHHTTEECCTTCCEETTSGGGTTCCSCSSSSCCSHHHHHCCHHH
T ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCHHH
T ss_conf 12011022047898789888360589954543113111136157259832321232335689869898992325159999
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
-
T Consensus 321 l~HL~~~~E~l~~~Ll~iHNl~~~~~~~~~iR~aI~~g~f~~~~~~f~~~y~ 372 (372)
T d1r5ya_ 321 IHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF 372 (372)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 9877638836899999999999999999999999985999999999999649
|
| >d1c3pa_ c.42.1.2 (A:) HDAC homologue {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: HDAC homologue species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=28030.14 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~k~~li~~~d~~~~~~g~~HPe~p~Rl~~i~~~L~~~gl~~~~~~~~p~~At~e~L~~vHs~~Yi~~l~~~~~~~~~~~~ 80 (372)
T d1c3pa_ 1 KKVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLMEAERCQCVPKG 80 (372)
T ss_dssp CCEEEEECGGGGGSCCCTTCGGGSCCHHHHHHHHHHTTCCCGGGEEECCCCCHHHHTTTSCHHHHHHHHHHHHHTSCCTT
T ss_pred CEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC
T ss_conf 90899968201587897843959799999999999769987880771898999999871899999999974544467522
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~p~~~~~~~~a~~~~g~~~~a~~~~~~g~~a~~ppGG~HHA~~~~a~GFC~fNnvAiaa~~l~~~~~~R 160 (372)
T d1c3pa_ 81 AREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKKGFKR 160 (372)
T ss_dssp HHHHHCCSSSSSCSSTTTTHHHHHHHHHHHHHHHHHHTTCEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHHHTTCCC
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 31014688767878889999998753358897653224542241246534421024313640460999999998744674
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 V~ivD~DvHhGnGtq~if~~d~~V~~~SiH~~~~~~~p~~tG~~~e~G~~~g~g~~~NiPL~~g~~D~~y~~~~~~~l~p 240 (372)
T d1c3pa_ 161 ILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEGKGKGYNLNIPLPKGLNDNEFLFALEKSLEI 240 (372)
T ss_dssp EEEEECSSSCCHHHHHHHTTCSSEEEEEEEECTTTSTTSSSCCTTCCCCGGGTTSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 47874345677762577761477543000257777788888772236787665412414488655628999999986799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~f~Pd~IvvsaG~D~~~~Dplg~l~lt~~~~~~~~~~~~~~~~~~~~vleGGY~~~~~a~~~~~~~~~l~g~~~~~~ 320 (372)
T d1c3pa_ 241 VKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIVREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREVPEK 320 (372)
T ss_dssp HHHHCCCSEEEEECCSTTBTTCTTCSCCBCHHHHHHHHHHHHHHHCSCEEECCCCCCHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99866976899978816677686568868888999999999985899699975878588999999999999829999845
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 372 (372)
T d1c3pa_ 321 LNNKAKELLKSIDFEEFDDEVDRSYMLETLKDPWRGGEVRKEVKDTLEKAKA 372 (372)
T ss_dssp CCHHHHHHHHHSCCCCSSTTCCCGGGGGCSSCCCCCCCCCHHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 6877887631588777424467033200247855535778899999998509
|
| >d1noya_ c.55.3.5 (A:) Exonuclease domain of family B DNA polymerases {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Ribonuclease H-like family: DnaQ-like 3'-5' exonuclease domain: Exonuclease domain of family B DNA polymerases species: Bacteriophage T4 [TaxId: 10665]
Probab=100.00 E-value=0 Score=28030.05 Aligned_cols=1 Identities=0% Similarity=-0.460 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~fytnv~~~gn~il~rg~~~~G~r~~~~~~f~Py~y~~~~~~~~~ksl~G~~v~~v~f~s~~~~r~~~~~~~~~~~~~~ 80 (372)
T d1noya_ 1 DEFYISIETVGNNIVERYIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAPQKFPSMKDARDWMKRMEDIGLEAL 80 (372)
T ss_dssp CCEEEEEEEETTEEEEEEECTTSCEEEEEEECCCSEECGGGGTCSSCTTTTCCCCCEECSSHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCEEEEEECCEEEEEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEE
T ss_conf 98661369999999999996599799999656058999858997858359908877857999999999997256663464
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~die~~~~~~~~~~~~~~~i~~I~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (372)
T d1noya_ 81 GMNDFKLAYISDTYGSEIVYDRKFVRVANCDIEVTGDKFPDPMKAEYEIDAITHYDSIDDRFYVFDLLNSMYGSVSKWDA 160 (372)
T ss_dssp HHHHHHHHHHHHHTCSCCCCCGGGCCEEEEEEEECCSSCCCTTTCCSCEEEEEEEETTTTEEEEEEECCCSSCCCCCCCH
T ss_pred ECCCCCEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 02343413312316545556623225773022002346688631010000222144159879999962656566556555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~E~~lL~~F~~~~~~~dPDii~G~N~~~FD~pYL~~R~~~~~~~~~~~~~~~ 240 (372)
T d1noya_ 161 KLAAKLDCEGGDEVPQEILDRVIYMPFDNERDMLMEYINLWEQKRPAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSP 240 (372)
T ss_dssp HHHHSCGGGTCCCCCHHHHTTEEEEEESCHHHHHHHHHHHHHHSCCSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGST
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 55433222346665545668759998099999999999999872888799970678616799999987456310111221
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~sy~L~~v~~~~l~~~K~~~~~~l~~~~~~d~~~l~~Yn 320 (372)
T d1noya_ 241 IGRVKSKLLQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKGKLPYDGPINKLRETNHQRYISYN 320 (372)
T ss_dssp TSCEEEEECCGGGCSCEEEEETTSEECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCCCCCCSSCGGGHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCCCCEEEEECCCEEEEEEHHHEECCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCHHHHHEEC
T ss_conf 26521001101356522564033148975101200002330024344310001146777742249999874925702201
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
.
T Consensus 321 i~D~~L~~~L~~kl~~i~~~~~la~~~gvp~~~v~~~~~~~~~~~~~~l~~~ 372 (372)
T d1noya_ 321 IIDVESVQAIDKIRGFIDLVLSMSYYAKMPFSGVMSPIKTWDAIIFNSLKGE 372 (372)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTCCGGGGGCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 9988999999998757999999999989398993749999999999986259
|
| >d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Germin/Seed storage 7S protein domain: Oxalate decarboxylase OxdC (YvrK) species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=28029.87 Aligned_cols=1 Identities=100% Similarity=1.268 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~g~~~~gp~~~~~~~~~~d~~~~~~td~g~~~~~~~~f~~~~~~~~~gg~~r~~~~~~lp~~~~~a~~~~~L~ 80 (372)
T d1j58a_ 1 PQPIRGDKGATVKIPRNIERDRQNPDMLVPPETDHGTVSNMKFSFSDTHNRLEKGGYAREVTVRELPISENLASVNMRLK 80 (372)
T ss_dssp CCSEETTEECCCCSCCCHHHHHHCHHHHSCCTTCBSCCCCCEECGGGSCCEEETTEEEEEECTTTCTTCSSCEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHCHHHHHHHHEEEEEC
T ss_conf 98604899998889877666531864458997766755105642133544236797147864443800331100589988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 pga~~~pH~H~~ae~~yVl~G~~~vt~Vd~~G~~~~~~l~~GDv~~~P~G~~H~i~n~~dg~e~l~vf~~~~~~~~~~f~ 160 (372)
T d1j58a_ 81 PGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQ 160 (372)
T ss_dssp TTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEESCTTCCGGGEEE
T ss_pred CCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCEEEEEECCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEE
T ss_conf 99676873637643899995779999994899489988536988998999779997179995899997788866653043
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~p~evLa~af~v~~~~~~~i~~~e~~i~~~~~p~~~~~~~~~~~~g~~~~~~~~~l~~q~P~~~~gG~~~~~d 240 (372)
T d1j58a_ 161 LTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIAD 240 (372)
T ss_dssp HHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCCEECSSEEEEEES
T ss_pred ECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
T ss_conf 10121359878998761999899863431223312456887423454147788998763230224688415774679926
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~fp~~~~is~~~~~l~PG~~~~~H~Hp~a~E~~yvl~G~g~v~v~~~~g~~~t~~l~~GDv~~iP~g~~H~i~N~g~e 320 (372)
T d1j58a_ 241 STNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDE 320 (372)
T ss_dssp TTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSS
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCCC
T ss_conf 33477667506999998899645887799972999999790999998579806899825985899899974999987999
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~l~vf~s~~~~~i~~~~~l~~~P~~vv~~~~~~~~e~~~~l~~~k~~vv 372 (372)
T d1j58a_ 321 PLVFLEIFKDDHYADVSLNQWLAMLPETFVQAHLDLGKDFTDVLSKEKHPVV 372 (372)
T ss_dssp CEEEEEEESSSSCCCEEHHHHHHTSCHHHHHHHHTCCHHHHTTCCSSCCSBC
T ss_pred CEEEEEEECCCCCCEEEHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 8899999789996545687876549999999885969999998875687669
|
| >d1qlpa_ e.1.1.1 (A:) Antitrypsin, alpha-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Serpins superfamily: Serpins family: Serpins domain: Antitrypsin, alpha-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=28029.44 Aligned_cols=1 Identities=0% Similarity=-1.490 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~Fa~~l~~~l~~~~~~~N~v~SP~si~~~La~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1qlpa_ 1 FNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAQIHEGFQELLRT 80 (372)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHCSSSCEEECHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 93220769999999999986129798299878999999999998546799999999709998778689999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~l~~~n~i~~~~~~~l~~~f~~~~~~~f~~~~~~~df~~~~~~~~~iN~wv~~~T~g~i~~~~~~~~~~t~l 160 (372)
T d1qlpa_ 81 LNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVF 160 (372)
T ss_dssp HSCSSCCCCEEEEEEEEEETTCCBCHHHHHHHHHTSCCEEEEECTTSHHHHHHHHHHHHHHHTTTSSCSCCCCCCTTCCE
T ss_pred HHCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 53247614451010023316776478999999987275241455444699999999999998579875545678974155
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~lina~~f~~~W~~~F~~~~t~~~~F~~~~~~~~~V~mm~~~~~f~~~~~~~l~~~~~~lp~~~~~~~~il~~~~~~l~~ 240 (372)
T d1qlpa_ 161 ALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQH 240 (372)
T ss_dssp EEEEEEEECCCBSSCCCGGGCEEEEEESSSSCEEEEEEEEEEEEEEEEEETTTTEEEEEEEETTTEEEEEEEECTTCHHH
T ss_pred HHHHHHEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCHHH
T ss_conf 54323213043113566210445654036885489750000153111014667869995256777259999778679899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~~~L~~~~l~~~~~~~~~~~v~v~lPkF~i~~~~dl~~~L~~lGl~~~F~~~ad~~~i~~~~~l~vs~v~q~~~i~v~E 320 (372)
T d1qlpa_ 241 LENELTHDIITKFLENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDE 320 (372)
T ss_dssp HHHHCCHHHHHHHHHCCCCEEEEEEEECEEEEEEEEHHHHTGGGTCCGGGSTTCCCTTTBSSSCCCCCEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCHHHHHHHCCCHHHHCCHHHHCCCCCCCCCEEEEEEEEEEEEECC
T ss_conf 98764599999998735644789998789985211577877755946554225453176788981566378899999878
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Gteaaa~t~~~~~~~s~~~~f~~drPFlf~I~~~~t~~iLf~G~v~~Pt~~ 372 (372)
T d1qlpa_ 321 KGTEAAGAMFLEAIPMSIPPEVKFNKPFVFLMIEQNTKSPLFMGKVVNPTQK 372 (372)
T ss_dssp CSSSSCCCCCCCCCCSSCCCEEECCSCEEEEEEETTTCCEEEEEEESCTTCC
T ss_pred CCCCHHHHHEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEECCCCCC
T ss_conf 8400323210102357899759926998999999899939999992799899
|
| >d1vkpa_ d.126.1.6 (A:) Agmatine iminohydrolase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=28027.51 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~tp~~~gfrmPaEwe~~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~Ia~~e~V~vl~~~~~~~~~~~~~~~nV~~~~ 80 (372)
T d1vkpa_ 1 RESPAEHGYYMPAEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCASPAQWENARKQLPEDIRVVE 80 (372)
T ss_dssp CCCGGGGTCBCCCTTSCEEEEEECCCCCTTTSTGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTTSEEEE
T ss_pred CCCHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEE
T ss_conf 97935549976898563615999868998621345556899999999997389849999797999999975746728999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~dD~W~RD~GPifv~~~~~~~~~~~~~~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~lvlEGG 160 (372)
T d1vkpa_ 81 MSMNDSWFRDSGPTFIVRKRPVKLSSLNRNIAGIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGG 160 (372)
T ss_dssp CCCSSCCHHHHSCEEEECCC-------CCSEEEEEEECCTTTHHHHSSBSCCTTHHHHHHHHHHHHTCCEEEEEEECCGG
T ss_pred CCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
T ss_conf 15898788614877998088642334678557860201366655555421345677999987412168744567166389
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~ie~dG~GtlltTe~clln~nRNP~~sk~~ie~~Lk~~lGv~~viwl~~g~~~~DdTdGHID~~arFi~~~til~~~~~d 240 (372)
T d1vkpa_ 161 SIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDD 240 (372)
T ss_dssp GEEECSSSEEEEEHHHHTCTTTCTTSCHHHHHHHHHHHHCCCEEEEESCCCTTCTTTTCCGGGTEEEEETTEEEEEECCC
T ss_pred CEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEECCCCEEEEEECCC
T ss_conf 77989996299756782077889998999999999986297559997670027988765500058971799079873288
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~y~~~~~~~~~L~~~~d~~g~~~~ii~lp~p~~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (372)
T d1vkpa_ 241 ETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAP 320 (372)
T ss_dssp TTSTHHHHHHHHHHHHHTCBCTTSCBCEEEEEECCSCCBCCHHHHHTSCCCSSBCCCCTTCBCCCCTTCCEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEC
T ss_conf 76855899999999999887505884317983034540003200145334666554568988655347999999999995
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~ygd~~~D~~A~~~l~~~fP~r~Vi~Id~~~~i~~~gG~iHCiT~q~Pa~~~ 372 (372)
T d1vkpa_ 321 QFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPT 372 (372)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTSEEEEETTTHHHHTTTCCTGGGEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 7989430799999999988898799827889998579853575777779999
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=28025.32 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 80 (372)
T d1teda_ 1 AQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPAT 80 (372)
T ss_dssp CCCCCCCCCCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSC
T ss_pred CCCCCCCCCCEEEEEEEEEECCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHCCCC
T ss_conf 99897999844899988996799178399999999860678177899999998359863514516543461445414887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~r~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 160 (372)
T d1teda_ 81 IRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNA 160 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH
T ss_conf 88888877737999999999999997599988998899964689888668899876514687625766004674179999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 L~~A~~~l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (372)
T d1teda_ 161 LGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTE 240 (372)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCT
T ss_pred HHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 99999998559976521653112002104777613565655413632047750477645567750587035642168876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l 320 (372)
T d1teda_ 241 DGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 320 (372)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 55456778776320014777999998889999987876399878742232247659999999998198978816568888
Q ss_pred ---------------------------------------------------C
Q ss_conf ---------------------------------------------------8
Q 001738 683 ---------------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~~ 372 (372)
T d1teda_ 321 ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR 372 (372)
T ss_dssp HHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECCC
T ss_pred HCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHEEECC
T ss_conf 4047748879999999999838878899889999995899589876325229
|
| >d1mkfa_ b.116.1.1 (A:) Viral chemokine binding protein m3 {Murid herpesvirus 4, MuHV-4 [TaxId: 33708]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Viral chemokine binding protein m3 superfamily: Viral chemokine binding protein m3 family: Viral chemokine binding protein m3 domain: Viral chemokine binding protein m3 species: Murid herpesvirus 4, MuHV-4 [TaxId: 33708]
Probab=100.00 E-value=0 Score=27958.99 Aligned_cols=1 Identities=0% Similarity=-0.726 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 hssgvstqsvdlsqikrgdeiqahcltpaetevtecagilkdvlsknlhelqglcnvknkmgvpwvsveelgqeiitgRL 80 (371)
T d1mkfa_ 1 HSSGVSTQSVDLSQIKRGDEIQAHCLTPAETEVTECAGILKDVLSKNLHELQGLCNVKNKMGVPWVSVEELGQEIITGRL 80 (371)
T ss_dssp CCSEEEECCCCTTTSTTHHHHHHHHSSSCCSSTHHHHHHHHHHHHHCTTGGGGGCSEEEEEEEECEEEGGGTEEEEEECC
T ss_pred CCCCCCCCCCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCC
T ss_conf 98774343323888445425665207821003677778899987642887751430244468846569884125500676
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 P~Ps~~~~~~~~~vrVLV~AEs~tpee~P~~~~~A~~~m~T~~~~~~LsD~N~~F~s~~~~vW~i~i~k~~VD~~mLT~A 160 (371)
T d1mkfa_ 81 PFPSVGGTPVNDLVRVLVVAESNTPEETPEEEFYAYVELQTELYTFGLSDDNVVFTSDYMTVWMIDIPKSYVDVGMLTRA 160 (371)
T ss_dssp CCSSCCCCTTSCEEEEEEEEECCCCSSCCSSCCCEEEEEECSSCEEEECGGGEEEEETTEEEEEEEEEGGGSSTTCEEEE
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCEEEEECCEEEEEEECCHHEECHHHHHHH
T ss_conf 77755787667648999995179987880788765441044554785024643787400279999646001122143355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~FL~~~P~~k~T~mi~Y~~TFTWCGeigai~e~~~P~PS~~A~~PVC~~~~RY~~~kF~~~DGC~~Et~~~~~s~i~P~~ 240 (371)
T d1mkfa_ 161 TFLEQWPGAKVTVMIPYSSTFTWCGELGAISEESAPQPSLSARSPVCKNSARYSTSKFCEVDGCTAETGMEKMSLLTPFG 240 (371)
T ss_dssp EESSCCTTCEEEEEEEEETTEEEEEEEEEECTTSCCBCCSEEEEETTSSGGGGSSSTTTTTTTCCGGGTSCCEEECSCTT
T ss_pred HHHHHCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCCCCCEEECCCC
T ss_conf 67754767608998436565053403254368778997610038542004665347524136743000555640555578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~P~~qa~mNTC~C~~KY~~~~L~~~~~i~i~~ia~~~~~~~P~YVm~~YF~St~~N~~~~s~~L~~C~~~mtsH~G~~~~ 320 (371)
T d1mkfa_ 241 GPPQQAKMNTCPCYYKYSVSPLPAMDHLILADLAGLDSLTSPVYVMAAYFDSTHENPVRPSSKLYHCALQMTSHDGVWTS 320 (371)
T ss_dssp SCSSCEEEESTHHHHHHCSSCCCCCSCEEEEEEECGGGCCSCEEEEEEEECCCCCCTTSCCCCEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEE
T ss_conf 98440303532058882476577334188876225233467406788750666667668898644899998743673013
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~s~QCP~~~~~G~~q~VL~~~~~pt~~~~iVGvsi~~eGQq~Ri~Y~Gdh 371 (371)
T d1mkfa_ 321 TSSEQCPIRLVEGQSQNVLQVRVAPTSMPNLVGVSLMLEGQQYRLEYFGDH 371 (371)
T ss_dssp CCCSSCCEEEEECSSTTEEEEEECGGGGGGEEEEEEEETTEEEEEESSCCC
T ss_pred EECCCCCEEEEECCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCC
T ss_conf 313557556730676068999982466764056999974700021012589
|
| >d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27957.08 Aligned_cols=1 Identities=0% Similarity=-0.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 MnsfG~~lr~ttfGESHG~alg~vidG~PaG~~i~~~~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtGsPI~ 80 (371)
T d1r53a_ 1 MSTFGKLFRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRPGQSKLSTPRDEKDRVEIQSGTEFGKTLGTPIA 80 (371)
T ss_dssp CCEECSSSEEEEECCTTSSEEEEEEECCCTTCBCCGGGTHHHHHTTCC------------CCCEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEE
T ss_conf 98776534898415478884489980508588838999999996459999998866899984899243208978455207
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~kyg~~d~~gggrsSaReTa~rvaaGaia~~~L~~~~gI~v~s~V~~IG~ 160 (371)
T d1r53a_ 81 MMIKNEDQRPHDYSDMDKFPRPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGE 160 (371)
T ss_dssp EEEEC-----------------------------------------CCCHHHHHHHHHHHHHHHHTTCCEEEEEEEEETT
T ss_pred EEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECC
T ss_conf 88814532310010133324668741776764486533565415688899999999999999998489799999998611
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~~~~~~~d~~~~~~~~~~~~~~~~~~~~vrc~D~~~~~~m~~~I~~ak~~gDSlGGivev~~~gvP~GLG~p~fdkLda 240 (371)
T d1r53a_ 161 IKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRNLPTGLGEPCFDKLEA 240 (371)
T ss_dssp EECCCCTTCHHHHHHHHHCCHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEEEESCCTTCSBTTTBCHHH
T ss_pred EECCCCCCCHHHHHCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCH
T ss_conf 77154345612332214465655553196107886888999999999972599755089999970589877720044145
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~LA~A~mSIpAVKgVEfG~GF~~a~~~GSe~nD~~~~~~~~g~~~~~tN~aGGi~GGiSnG~pi~~rva~KP~sSi~~~q 320 (371)
T d1r53a_ 241 MLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEKETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQ 320 (371)
T ss_dssp HHHHHHHTSTTBCCCEETTTTGGGGSCHHHHHCSBC--------CBCCCCSCSEETTEECSSCEEEEEEECCC-------
T ss_pred HHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 88887742410025650456117645562247762205788864245688777546764896069999857810046877
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~Tvd~~~~~~~~~~~gRhDpc~vpra~pV~Eam~alvlad~~L~~~~~d~~ 371 (371)
T d1r53a_ 321 KTATYDGEEGILAAKGRHDPAVTPRAIPIVEAMTALVLADALLIQKARDFS 371 (371)
T ss_dssp ----------------CCCSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 547757978776106988981726548999999999999999998516789
|
| >d1to6a_ c.141.1.1 (A:) Glycerate kinase GlxK {Neisseria meningitidis, (serogroup A) [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerate kinase I superfamily: Glycerate kinase I family: Glycerate kinase I domain: Glycerate kinase GlxK species: Neisseria meningitidis, (serogroup A) [TaxId: 487]
Probab=100.00 E-value=0 Score=27956.50 Aligned_cols=1 Identities=0% Similarity=0.570 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 MkiliApDsFKgslsA~ea~~ai~~g~~~~~p~~~~~~~P~aDGGEGt~dal~~~~~g~~~~~~v~gplg~~v~a~~~~~ 80 (371)
T d1to6a_ 1 MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDGGEGTVDAIRHSLDLEEKCLQVTGSFGQKEVMRYFQK 80 (371)
T ss_dssp CEEEECCCCBTTTBCHHHHHHHHHHHHHHHCTTCEEEECCCCSSSTTHHHHHHTTSCCEEEEEEEECTTSSEEEEEEEES
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECC
T ss_conf 90999943888862899999999999998599988999730648543999999863997999999899998157899637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~tAvIE~A~asGL~l~~~~~r~p~~~tT~G~GelI~~Al~~G~~~iilglGGSAT~DgG~G~L~ALG~~f~D~~g~~l~ 160 (371)
T d1to6a_ 81 EQLALFEVADLVGLGKIPLEKRNPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP 160 (371)
T ss_dssp SSEEEEETHHHHBGGGSCTTSCCTTSCCCHHHHHHHHHHHHTTCCEEEEEECSBCCCSTTHHHHHTTTCEEECTTSCBCC
T ss_pred CCEEEEHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCC
T ss_conf 87543016663676303887777112246119999999997699769997158636616789999614536888999888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~g~~L~~i~~id~~~~~~~l~~v~~~ia~DV~npL~G~~GAa~vfgpQKGa~~~~v~~le~~l~~~a~~~~~~~~~~~g 240 (371)
T d1to6a_ 161 ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFEVVDQAIQDFYEKVSPATLKLKG 240 (371)
T ss_dssp SSGGGGGTCCEEECSSCCCCCTTCEEEEEESCCCCSSSTTSHHHHHSGGGTCCGGGHHHHHHHHHHHHHHHCGGGGGCTT
T ss_pred CCCHHHHHHHCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCC
T ss_conf 86153675002662368711342849999556765547878645650445887899999999999999984311015678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~gaAGG~~~~l~~~l~a~~~~G~~~v~~~~~l~~~i~~aDlVITGEG~~D~QSl~GK~p~~va~~ak~~~pviai~G~v~ 320 (371)
T d1to6a_ 241 AGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKVSDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLV 320 (371)
T ss_dssp TTTTTTHHHHHHHHSCCEEEEHHHHHHHHTTHHHHTTTCSEEEECCSEECSTTTTTCHHHHHHTTSCTTCCEEEEESEEC
T ss_pred CCCHHHHHHHHHHHHCCEECCCHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 63102578999999588846509999988599978356998997887552321265767999999767998899977557
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~Gi~~~~si~~~~~~l~~a~~~a~~~L~~~a~~i~r~l~~~~~ 371 (371)
T d1to6a_ 321 EDLPSLPFENIQAAFSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI 371 (371)
T ss_dssp TTCCCSSBTTEEEEEECCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 886678754962999758899999999998999999999999999842379
|
| >d1aj8a_ a.103.1.1 (A:) Citrate synthase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=0 Score=27955.61 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~rGL~gv~v~~T~Is~idg~~G~L~YRG~~i~dLa~~~sfEeVa~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~ 80 (371)
T d1aj8a_ 1 LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIM 80 (371)
T ss_dssp CCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCCCCCCCEEEEEECCEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99777998162686712768988799988769998646999999999977979899999999999997168988999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~p~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~a~~~~i~~~~~~~~~~~~~~~p~~~~~~a~~~l~~~ 160 (371)
T d1aj8a_ 81 EALPKNTHPMGALRTIISYLGNIDDSGDIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYML 160 (371)
T ss_dssp HHSCTTCCHHHHHHHHHHHHHHHSTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 86114641267777776410110100124310146788899999999999999999837998879860056899987652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~g~~~~~~~~~~l~~~Lvl~aDHg~n~Stfa~r~vaSt~~d~~~a~~ag~~al~G~~hgga~~~~~~~~~~~~~~~~~~~ 240 (371)
T d1aj8a_ 161 HGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPEKVEE 240 (371)
T ss_dssp HSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGGGHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 38878879999999999983677777620656654115775202888888871542011016799999985065420699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~v~~~l~~~~~i~GfGH~vy~~~DPRa~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pNvd~~~~~l~~~lg~p 320 (371)
T d1aj8a_ 241 WFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKLGDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIP 320 (371)
T ss_dssp HHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCC
T ss_pred HHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 99998624776544472211466606889999887630003568999999999987421798838188999999983998
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~lf~~~R~~G~~AH~~Eq~~~~~l~RP~~~YvG~~~~~~~~i~~r~ 371 (371)
T d1aj8a_ 321 IELYTTIFAMGRIAGWTAHLAEYVSHNRIIRPRLQYVGEIGKKYLPIELRR 371 (371)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHTTCCCCCCEEEECSCCCBCCCCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHCC
T ss_conf 566669999999999999999998679973855401699899987767659
|
| >d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: HybD-like family: Germination protease domain: Germination protease species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=0 Score=27955.32 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~~~~l~~y~iRTDLAlEa~E~~~e~~~~~~~~~ei~GV~~~e~~~~~ikiT~V~I~e~Ga~~mgKp~G~YiTiEap~l 80 (371)
T d1c8ba_ 1 MEKELDLSQYSVRTDLAVEAKDIALENQPKPNNQSEIKGVIVKEKEEQGVKISMVEITEEGAEAIGKKKGRYVTLESVGI 80 (371)
T ss_dssp CCCCCCCCCCCCCCCCTTHHHHHHHHHCCC---------CCCSEEEEEEEETTEEEEEEEECHHHHTTTTSCCEEEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEECCHHHHHHCCCCCCEEEEECCCC
T ss_conf 98655521143537878988998865320113467668769888862986899999782689985899851799846877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~D~~~~~e~~~~v~a~~l~~l~~~~~~~~~~~vLVVGLGN~~VTPDALGP~vv~~l~VTRHL~~~~p~~~~~g~r~Vs 160 (371)
T d1c8ba_ 81 REQDTEKQEEAMEEVFAKELNFFIKSLNIPDDASCLVVGLGNLSVTPDALGPKAVDNLLITRHLFELQPESVQDGFRPVS 160 (371)
T ss_dssp CCCSSSSSSHHHHHHHHHHHHHHHHHTTCCTTCCEEEEECSCSSSGGGCHHHHHHTTCCCCHHHHHHSCCSSCSSCCCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHEECCEEEEHHHHHHCCHHHCCCCCEEE
T ss_conf 75678899999999999999999863178988817999688877786563701113363343045547254507871256
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 aIaPGVmg~TGiET~EIIkgiVek~kPD~VIaIDALAaRs~~Rln~TIQIsDTGI~PGSGVGN~R~~l~~etLGVPVIAI 240 (371)
T d1c8ba_ 161 AIVPGVMGMTGIETSDIIFGVVKKVNPDFIIAIDALAARSIERVNATIQISDSGIHPGSGVGNKRKEISYETLGIPVIAI 240 (371)
T ss_dssp EECSGGGCCCSSCHHHHHHHHHHHHCCSEEEEEEEECCSSGGGSSSEEEEETTCBCSCSSSSCCCCBSSSCCC-------
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCEEEE
T ss_conf 88587550344249999999987518989999601013752333564786677858887767555637987829988997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 GVPTVVdAatI~~Dtid~~~~~~~~~~~e~~~~s~~l~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ek~~Li 320 (371)
T d1c8ba_ 241 GIPTVVDAVSITSDTIDFILKHFGREMKEQGKPSKSLLPSGMTFGEKKKLTEDDLPNEEQRQTYLGMIGTLPDEEKRRLI 320 (371)
T ss_dssp --CCCEEEEEEECCEESCCCHHHHTTTTTCC---------------------------------CCCCSSCCCTTHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 68806601998789999999987543201346531113332333422222222343112204688776246889999999
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~EvL~P~~~~l~VTPKeID~~I~~~s~iIs~giN~ALhp~i~~e~~~~y~~ 371 (371)
T d1c8ba_ 321 HEVLAPLGHNLMVTPKEVDMFIEDMANVVAGGLNAALHHEVDQENFGAYTH 371 (371)
T ss_dssp HHHTCSSCTTEEEEETTHHHHHHHHHHHHHHHHGGGGSCCCCSCCCCSSCC
T ss_pred HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 997572479655675738999999999999898898677888778764339
|
| >d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27955.01 Aligned_cols=1 Identities=0% Similarity=-0.991 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~d~y~~lr~~w~~~~~G~~~~~~~d~~~~~~~~~l~~~a~~~~~~~~~~~~~~~lw~dl~~~~~~~~~~~~~~rL~~mA 80 (371)
T d1n7oa1 1 VKDTYTDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMA 80 (371)
T ss_dssp CCSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHSCCSSSCSSSCGGGCCTTSTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96489999999999863745677687899999999999999999872135677777789987775147999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ay~~pgs~lY~d~~l~~~I~~al~~l~~~~y~~~~~~~gNWw~~~Ig~P~~l~~~lill~~~l~~~~~~~~~~~i~~~~ 160 (371)
T d1n7oa1 81 KQVTNPSSRYYQDETVVRTVRDSMEWMHKHVYNSEKSIVGNWWDYEIGTPRAINNTLSLMKEYFSDEEIKKYTDVIEKFV 160 (371)
T ss_dssp HHHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99859998553699999999999999997089888888898303640758999999988311169999999999999867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG 240 (371)
T d1n7oa1 161 PDPEHFRKTTDNPVKALGGNLVDMGRVKVIAGLLRKDDQEISSTIRSIEQVFKLVDQGEGFYQDGSYIDHTNVAYTGAYG 240 (371)
T ss_dssp CCTTEECTTSSSCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGGSCCSSSSEECTTSCEEETTTEECTTTHH
T ss_pred CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCEECCCCEECCCCEECCCCCH
T ss_conf 88212035677866064116999899999999986799999999999887741102688440377601257622167513
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~G~~~d~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~ 320 (371)
T d1n7oa1 241 NVLIDGLSQLLPVIQKTKNPIDKDKMQTMYHWIDKSFAPLLVNGELMDMSRGRSISRANSEGHVAAVEVLRGIHRIADMS 320 (371)
T ss_dssp HHHHHHHHHHHHHHTTSSSCCCHHHHTHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799888897899999999995433010555015557886225788666414899999999985149
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~iK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~i~~~p~ 371 (371)
T d1n7oa1 321 EGETKQRLQSLVKTIVQSDSYYDVFKNLKTYKDISLMQSLLSDAGVASVPR 371 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSSCGGGGCCSHHHHHHHHHHHHCTTSCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999999999966875452225345789999999865898898998
|
| >d1f1sa1 a.102.3.2 (A:249-619) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Hyaluronate lyase species: Streptococcus agalactiae [TaxId: 1311]
Probab=100.00 E-value=0 Score=27954.42 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~d~y~~l~~~w~~~~~G~~~~d~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~lw~dl~~~~~s~~~~~~~~rL~~mA~ 80 (371)
T d1f1sa1 1 EDNFTKLLDKWNDVTIGNYVYDTNDSNMQKLNQKLDETNAKNIEAIKLDSNRTFLWKDLDNLNNSAQLTATYRRLEDLAK 80 (371)
T ss_dssp CSHHHHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSCGGGCCTTSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 97699999999998638766786677899999999999999998612676656667899977752589999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 aY~~pgs~ly~d~~l~~~I~~aL~~l~~~~y~~~~~~~~~~NWW~~eIg~P~~l~~~lill~d~l~~~~~~~~~~~i~~~ 160 (371)
T d1f1sa1 81 QITNPHSTIYKNEKAIRTVKESLAWLHQNFYNVNKDIEGSANWWDFEIGVPRSITGTLSLMNNYFTDAEIKTYTDPIEHF 160 (371)
T ss_dssp HHTCTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCTTSCHHHHHTHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 98499985547999999999999999983899876688989861123175799999998720015999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~p~p~~~~~~~~~~~~~TGaN~vd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~v~~gdG~~~DgSfiqH~~v~Y~G~Y 240 (371)
T d1f1sa1 161 VPDAEYFRKTLVNPFKALGGNLVDMGRVKIIEGLLRKDNTIIEKTSHSLKNLFTTATKAEGFYADGSYIDHTNVAYTGAY 240 (371)
T ss_dssp CCCTTEESTTSSCCEECCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCCBSSSSEEBTTSCEEETTTEECTTTH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHCCCCEECCCCC
T ss_conf 78813322567886636522699999999999998289999999999876561103578723047661004670006762
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 G~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~~~~g~~~~~v~GR~IsR~~~~~~~~g~~~~~~~~~l~~~ 320 (371)
T d1f1sa1 241 GNVLIDGLTQLLPIIQETDYKISNQELDMVYKWINQSFLPLIVKGELMDMSRGRSISREAASSHAAAVEVLRGFLRLANM 320 (371)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 39999999999999767988888789999999999700456357643565677622478876632799999999987334
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~vK~~i~~~~~~~~~~~~~~~~~~~~~~~ll~d~~I~~~p 371 (371)
T d1f1sa1 321 SNEERNLDLKSTIKTIITSNKFYNVFNNLKSYSDIANMNKLLNDSTVATKP 371 (371)
T ss_dssp CCSHHHHHHHHHHHHHHHHCCSSCGGGGCCSHHHHHHHHHHHHCTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 989999999999999984587644100645599999999985578888898
|
| >d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolase family 7 catalytic core domain: Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) species: Trichoderma reesei, Endoglucanase I [TaxId: 51453]
Probab=100.00 E-value=0 Score=27949.65 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 QQ~Gt~t~E~HP~ltwq~CT~~ggCt~~~g~vV~Danwrw~H~~~~~~c~~gn~~~~~lCpd~~tCa~nC~ldgaDY~~~ 80 (371)
T d1eg1a_ 1 EQPGTSTPEVHPKLTTYKCTKSGGCVAQDTSVVLDWNYRWMHDANYNSCTVNGGVNTTLCPDEATCGKNCFIEGVDYAAS 80 (371)
T ss_dssp CEECSSSCCCCCBCCEEEEETTTEEEEECCEEEECGGGSCEECTTCCBSEETTEECTTTCSSSHHHHHHCEECCCCTTTT
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 98887767548851447515899827723569980573202006986543388655234887566776246557763675
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 GVttsG~sltL~~~~~~~~~~~~~vGsRvYLl~~d~~Yqmf~Llg~EftFdVD~S~lpCGlNgALYfveM~adGg~s~~n 160 (371)
T d1eg1a_ 81 GVTTSGSSLTMNQYMPSSSGGYSSVSPRLYLLDSDGEYVMLKLNGQELSFDVDLSALPCGENGSLYLSQMDENGGANQYN 160 (371)
T ss_dssp TEEECSSEEEEESCEECSSSSEECCCCEEEEECTTSSBCCBCCTTSEEEEEECTTSCCTTEEEEEEEECCCTTTTCCSSC
T ss_pred CEEECCCCEEEEEEEECCCCCCCEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 26951884789999824766532023327997588837888726971688864478875223366665226568966667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~aGA~YGtGYCDAQCp~~~w~~g~~~~g~~G~CC~EmDIwEANs~A~a~TpH~C~~~~CD~~GC~~NpYR~g~~~fyG~G 240 (371)
T d1eg1a_ 161 TAGANYGSGYCDAQCPVQTWRNGTLNTSHQGFCCNEMDILEGNSRANALTPHSCTATACDSAGCGFNPYGSGYKSYYGPG 240 (371)
T ss_dssp CCGGGGTCCCCCTTCCBCSEETTEECTTCCBCCCCEEEEEEECSSCBCBEEECBCSSCBCSSCCCBCTTTTTCTTTSSTT
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 66663675323166873332136677578753035401015454134202434568741888867774555786211489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~tVDT~k~fTVVTQF~t~~~t~~G~LtEIrR~YVQ~GkvI~n~~~~~~~~~~~~~~~~~ggl~~mg~al~rGmVLv~SlW 320 (371)
T d1eg1a_ 241 DTVDTSKTFTIITQFNTDNGSPSGNLVSITRKYQQNGVDIPSAQPGGDTISSCPSASAYGGLATMGKALSSGMVLVFSIW 320 (371)
T ss_dssp SSSCTTSCEEEEEEEEETTSSTTSCEEEEEEEEEETTEECCCSSTTCEEECCCSGGGGGTTTHHHHHHHHHCBEEEEEEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEE
T ss_conf 63026897389988665898664434477579997998902776566644454442336889999888608869999979
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 dd~~~~M~WLDs~~~GpC~~~~g~p~~ve~~~p~a~V~~SNIKfG~I~ST~ 371 (371)
T d1eg1a_ 321 NDNSQYMNWLDSGNAGPCSSTEGNPSNILANNPNTHVVFSNIRWGDIGSTT 371 (371)
T ss_dssp ECTTTTTHHHHBGGGCSBCTTTTCHHHHHHHCTTCEEEEEEEEEESTTTCC
T ss_pred ECCCCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECEECCCCCCC
T ss_conf 279998523058988888888898668623289977998727583787889
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=100.00 E-value=0 Score=27948.02 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~p~l~~~~~~~f~~G~av~~~~l~~~~~~~~~~~~Fn~~t~eN~mKW~~iep~~G~~n~~~aD~~v~~a~~n 80 (371)
T d1r85a_ 1 KPHISALNAPQLDQRYKNEFTIGAAVEPYQLQNEKDVQMLKRHFNSIVAENVMKPISIQPEEGKFNFEQADRIVKFAKAN 80 (371)
T ss_dssp CCCCBGGGSCCHHHHHTTTCEEEEEECGGGGGCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 99664255664999860578387843755547988999999866900326467634124779925838899999999987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 gi~vrGH~LvW~~~~P~W~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g~I~~WDVvNE~~~~~~~~r 160 (371)
T d1r85a_ 81 GMDIRFHTLVWHSQVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDDIKYWDVVNEVVGDDGKLR 160 (371)
T ss_dssp TCEEEEECSCCSTTCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEESCBCTTSSBC
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 99787767786233354101256666444445422333699999999999999999974897528998731106998733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~Ndy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~~~~~i~ 240 (371)
T d1r85a_ 161 NSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIE 240 (371)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHH
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHH
T ss_conf 37522115858999999999986687546665145644440258999999999977997441433412367998889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~~a~~Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~D~~sW~~~~ 320 (371)
T d1r85a_ 241 KTINMFAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIADNHTWLDSR 320 (371)
T ss_dssp HHHHHHHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTTSCGGGGG
T ss_pred HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 99999997399237866674167776445766542328999999999999999999638974599986898797446788
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLlfD~~~~pKpAy~ai~d~~ 371 (371)
T d1r85a_ 321 ADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYKVKPAYWAIIDHK 371 (371)
T ss_dssp CCEEECTTSCEECCTTSCCSEEETTCSCCCCSSBCTTSBBCHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 865435545533222222222235677788734689988977999986349
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27945.41 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp CEEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEE
T ss_conf 95789998838999989999999994889899998889978999995588998889999799999999979993999862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s 160 (371)
T d1k8kc_ 81 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 160 (371)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 03321100122322110001111111211000002576302544203343311100101112221111111111100013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~ 240 (371)
T d1k8kc_ 161 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 240 (371)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEE
T ss_conf 47679998401576431001221111111101124404766747898751233210000147860588641012100000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (371)
T d1k8kc_ 241 SETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 320 (371)
T ss_dssp CSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCCCEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEE
T ss_conf 14665203654699979999819926787760898628872020676542124622001685065205871245566141
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~~~~~~l~~~ 371 (371)
T d1k8kc_ 321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLKIV 371 (371)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHHCTTCCCC
T ss_pred CCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHCCEECC
T ss_conf 255569889999948998656799999189939999698684653587639
|
| >d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Spore coat polysaccharide biosynthesis protein C species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27951.69 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 k~~~~~~p~~~~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~ 80 (371)
T d2fnua1 1 KEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTP 80 (371)
T ss_dssp CCEESCCCCCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred CEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf 92067899899999999999981898668977999999999997829399982689999999999544579977052013
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga 160 (371)
T d2fnua1 81 ISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGS 160 (371)
T ss_dssp SSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTC
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHCCCC
T ss_conf 44332200022058632123332223221012333046200001123445653334532121102220011314441586
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~G~~g~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl~ 240 (371)
T d2fnua1 161 EYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS 240 (371)
T ss_dssp EETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 01030478643222335566534320154578762122200000012101122322222311256510033145555544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 qL~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~y~pl~~ 320 (371)
T d2fnua1 241 QLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQ 320 (371)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGG
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCC
T ss_conf 43211210334443310001212223333332233333333333322222221067999999999879984144765112
Q ss_pred --------------------------------------------------C
Q ss_conf --------------------------------------------------8
Q 001738 683 --------------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~ 371 (371)
T d2fnua1 321 YQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 371 (371)
T ss_dssp SHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 898884266689989999984959896888889999999999999999748
|
| >d2dexx3 d.126.1.5 (X:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Peptidylarginine deiminase Pad4, catalytic C-terminal domain domain: Peptidylarginine deiminase Pad4, catalytic C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27879.84 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 APwimtpnt~~p~eV~v~~~~~n~~Fi~~v~~l~~~a~~~l~i~~~~~~~~DrW~QDe~E~GY~qaP~~~~pVvldspR~ 80 (370)
T d2dexx3 1 APWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRN 80 (370)
T ss_dssp CCCBCCCTTSCEEEEEECCCSSCHHHHHHHHHHHHHTTCEEEECCHHHHTTCCCTTTSEEEEEEEETTEEEEEEEECTTC
T ss_pred CCEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCEEEECCCCCCCEEEECCCC
T ss_conf 98574689998648999861268999999999999729956746524578980300021130342689974558607220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~gl~~fp~~~llg~dfG~~tr~~~~~~v~~lDSfGNLEvsPPvt~~Gk~YPlGRIliG~s~~~~~~gr~m~~~v~dFL~A 160 (370)
T d2dexx3 81 RGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSA 160 (370)
T ss_dssp SGGGGHHHHTTSBTTBEEEECSCSSSCCCGGGSGGGEEECCCEEETTEEETTCCEEEEECSSCCTTCCCCCHHHHHHHHH
T ss_pred CCCHHCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 33011527774178753387348877642023567734479862588426777488547788876545330899999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Q~VQ~Pv~L~sdWL~VGHVDEf~~FvPa~~~kgfrlLlAsP~a~~~Ll~~~q~~GhG~a~~f~g~~~~~~~tI~~iL~d~ 240 (370)
T d2dexx3 161 QQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNK 240 (370)
T ss_dssp SGGGCCEEEECTTBSSCCGGGTEEEEECSSGGGEEEEEEEHHHHHHHHHHHHHTTCTTCEETTTCTTSCCEEHHHHHHCH
T ss_pred HCCCCCCEECCCHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHCCH
T ss_conf 64599802305201057401017876369998538996388999999999987578646504655444221199986387
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~l~~~N~~~q~~Id~nr~iLKrELGLte~DIIdiP~LF~~~~~~~A~a~fP~mVNmlVlg~~L~iPkPfGP~inG~c~le 320 (370)
T d2dexx3 241 TLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLE 320 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEECCEEECGGGCEEESSCCTTSCEEETTEEEEECCCCCEETTEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHH
T ss_conf 78999999998631789999987099867731253440545878621237641666874033067899788488630799
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 e~v~~lleplGl~c~FiDD~~sYh~~~GeVHcgTNv~R~pf~~kWW~~~p 370 (370)
T d2dexx3 321 EKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPFSFKWWNMVP 370 (370)
T ss_dssp HHHHHHHGGGTCEEEEECCTTTTGGGTCCTTTTEEEEECCCSSCGGGCCC
T ss_pred HHHHHHHCCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99999745478758995473788861772540464441788866702689
|
| >d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NIF3 (NGG1p interacting factor 3)-like superfamily: NIF3 (NGG1p interacting factor 3)-like family: NIF3 (NGG1p interacting factor 3)-like domain: Nif3-related protein BC4286 species: Bacillus cereus [TaxId: 1396]
Probab=100.00 E-value=0 Score=27875.08 Aligned_cols=1 Identities=100% Similarity=0.537 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~p~~~eii~~le~~~P~~lAe~wDnvGL~vg~~~~~V~~I~valD~t~~vi~eAi~~~adlIItHHPl~f~~~k~l~~~~ 80 (370)
T d2gx8a1 1 IPNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDK 80 (370)
T ss_dssp CCBHHHHHHHHHHHSCGGGSCTTCCCEEEESCSSSBCCEEEEESSCCHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTS
T ss_pred CCCHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf 99789999999986999671567987379689977649899997699999999997799999979987768964466788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~li~~~I~vys~HTnlD~~~~G~nd~La~~Lgl~~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~agag~ 160 (370)
T d2gx8a1 81 AYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGH 160 (370)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHSTTSHHHHHHHHTTCEEEEEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHCCCEEEEECCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCHHCCCCC
T ss_conf 05699999997897699932402105775799999984897533335555555542389817256666653000037875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ig~y~~~~~~~~g~G~~~~~~~~~P~ig~~~~~~~~~e~~~e~~~~~~~~~~v~~al~~ahpy~~~~~~~~~~~~~~~~~ 240 (370)
T d2gx8a1 161 IGNYSHCTFSSEGTGTFVPQEGTNPYIGETGQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETL 240 (370)
T ss_dssp BTTEEEEEEEEEEEEEEEEC-----------CCEEEEEEEEEEEEEGGGHHHHHHHHHHHSSSSSCCEEEEEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf 45632131013676541477788875676785664131430220427778889998887288610133421234655555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 G~Grig~l~~p~~l~~~~~~vk~~l~~~~vr~~g~~~~~I~~VAvc~GSG~s~i~~a~~~gaDv~ITGe~k~h~~~dA~~ 320 (370)
T d2gx8a1 241 GLGKIGYLQEEMTLGQFAEHVKQSLDVKGARVVGKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHDAMM 320 (370)
T ss_dssp EEEEEEEEEEEEEHHHHHHHHHHHTTCSCCEEESCTTSEEEEEEEEEEECGGGHHHHHHTTCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf 76459993786039999999998719982899588887423799973662789999987799899982886799999997
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~gi~lId~GH~sE~~~~~~l~~~L~~~~~~~~~~i~v~~S~~~~dP~~~i 370 (370)
T d2gx8a1 321 LGLNIVDPGHNVEKVMKQGVQKQLQEKVDAKKLNVHIHASQLHTDPFIFV 370 (370)
T ss_dssp HTCEEEECCGGGGGHHHHHHHHHHHHHHHHTTCCCEEEECCCCCCCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEC
T ss_conf 69979978832628999999999999750048856999954778976449
|
| >d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: ATP-grasp superfamily: Glutathione synthetase ATP-binding domain-like family: Eukaryotic glutathione synthetase ATP-binding domain domain: Eukaryotic glutathione synthetase ATP-binding domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27874.92 Aligned_cols=1 Identities=100% Similarity=1.633 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~l~d~~~~~~l~~~a~dwa~~hGl~m~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~neL~~~vS~D 80 (370)
T d2hgsa4 1 TNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQN 80 (370)
T ss_dssp CCSGGGGSCHHHHHHHHHHHHHHHHHTTCEEECSSCTTCCSSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99876588889999999999999997483654688888878345578685577687899999999999999999999737
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~fL~~~l~~~~~~D~Ft~~L~~i~~~v~~~g~~q~l~Lgl~RSDYMl~~~~~~~~~~KQVE~NTIS~sfggls~~v~~l 160 (370)
T d2hgsa4 81 AAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAV 160 (370)
T ss_dssp HHHHHHHHHTHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECSSSCEEEEEEEEECSSCCCHHHHHHSHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCCCCCCEEEEEECEEEEECCHHHHHHHHH
T ss_conf 99999999877414799999999999999617866259988200654167777665424786112330002176648999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Hr~l~~~~~~~~~~~~~p~n~~~~~la~gla~a~~~y~~~KKvQQ~La~pgvLe~Fl~~~~~~~~~lr~tFa~ly~LD~~ 240 (370)
T d2hgsa4 161 HRHVLSVLSKTKEAGKILSNNPSKGLALGIAKAWELYGSTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVG 240 (370)
T ss_dssp HHHHHHHTTCHHHHTTSCCCCHHHHHHHHHHHHHHHHCCSHHHHHHTTSTTHHHHHSTTCHHHHHHHHHTCCCEEECSSS
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999862555421348899717999999999999974466778987498779987089889999999962314506887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~g~~a~~~a~~~p~~~VLKPQrEGGGnniyg~dI~~~L~~l~~~~e~~ayILMerI~P~~~~~~~vr~g~~~~~~~~iS 320 (370)
T d2hgsa4 241 EEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLRPGSPARVVQCIS 320 (370)
T ss_dssp HHHHHHHHHHHHSGGGEEEEESCCSSSCCBCHHHHHHHHHHHTTSGGGGGEEEEECCCCCCEEEEEECTTSCCEEEEEEE
T ss_pred CCCHHHHHHHHHCCHHEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCCC
T ss_conf 45269999767390227755632477651015488999997688676667899974378776865898896022056132
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
+
T Consensus 321 ElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpylv 370 (370)
T d2hgsa4 321 ELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV 370 (370)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEEC
T ss_pred CCCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCCEECCEECCCCCCCC
T ss_conf 22243799957987997165107886278988887810254206686649
|
| >d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Arginyl-tRNA synthetase (ArgRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27872.04 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 p~p~~~~~i~vEf~SpN~~kplHvGHlRs~iiGd~laril~~~G~~V~r~nyigD~G~Qi~~l~~~~~~~~~~~~~~~~~ 80 (370)
T d1iq0a2 1 PFPRRPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGRQAAETLFALRHYGLTWDGKEKY 80 (370)
T ss_dssp CCCCEEEEEEEECCCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECTTSHHHHHHHHHHHHTTCCCCSSSCH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 99999986999863899998864311361799999999999769979899847976499999999999856153346544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~y~~~~~~~~~~~~~~~~~e~~~~le~~~~~~~~~~~l~~~~~~l~~l~v~fD~~~~Es~l~~~~~~~~~i~~l 160 (370)
T d1iq0a2 81 DHFAGRAYVRLHQDPEYERLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRAGLLQKALALL 160 (370)
T ss_dssp HHHHHHHHHHHHHCTTTGGGHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHTTCCCSEEEEHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEECCCCCCCCHHHHHHHH
T ss_conf 56644324666542788888899999999987666999999999888865411331101012202322364146667666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~ga~~~d~~~~~~~~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~~~~~~~~~~~~~~i~i~~ 240 (370)
T d1iq0a2 161 EQSPHVFRPREGKYAGALVMDASPVIPGLEDPFFVLLRSNGTATYYAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSA 240 (370)
T ss_dssp TTSTTEECCSSSTTTTCEEEECTTTSCSCSCCEEEEECTTSCBCHHHHHHHHHHHHTTSSCCCEEEECCCSSCTTCEEEE
T ss_pred HHCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEC
T ss_conf 52361441246665447983374355566674003685267725862079987601033222110024467663267632
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~d~~~~~~~~d~~iyVvd~~Q~~h~~~v~~~~~~~g~~~~~~~~~hv~~g~v~~~g~kMStR~G~~v~l~dll~ea~~~a 320 (370)
T d1iq0a2 241 PEGEAYTPKAEETINVVDVRQSHPQALVRAALALAGYPALAEKAHHLAYETVLLEGRQMSGRKGLAVSVDEVLEEATRRA 320 (370)
T ss_dssp EEEEECCCCCSEEEEEEESSSCCCHHHHHHHHHHTTCHHHHTTEEEEEECCEEETTBCSCC----CCBHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
T ss_conf 43443202356788887124047999999999981998034111257899983378534356887458999999999999
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~r~~~~~~~~~~a~~vgi~avky~~L~~~~~~~~~Fd~d~~lsfe 370 (370)
T d1iq0a2 321 RAIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFE 370 (370)
T ss_dssp HHHHHHHCTTCSCHHHHHHHHHHHHHHHHHHHSCTTSCEEECHHHHHCSS
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCEECHHHHCCCC
T ss_conf 99998508982008999987616632225864589998568789921479
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=100.00 E-value=0 Score=27872.16 Aligned_cols=1 Identities=0% Similarity=-0.793 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~~~g~~ 80 (370)
T d2iida1 1 RNPLAECFQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWY 80 (370)
T ss_dssp CCTTGGGGCCTTHHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEE
T ss_pred CCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCE
T ss_conf 98557615881489999987647999999996999898889999999998789988999589988770678764877702
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~d~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iida1 81 ANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGK 160 (370)
T ss_dssp EESSCCCEETTCHHHHHHHHHTTCCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHH
T ss_pred ECCCCEEECCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32575563276489999999838763101025786279618852220233322455433320355543467777887877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (370)
T d2iida1 161 VVEELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKL 240 (370)
T ss_dssp HHHHHHHSCHHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHHHTTCCCEEEETTCTTHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88988742125666530100179999873255577887752100121001467776421001212566655404569999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~l~~~~g~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~aD~VI~A~p~~~l~~i~~~p~l~~~~~~ai~~~~~~~ 320 (370)
T d2iida1 241 PTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVFTPY 320 (370)
T ss_dssp HHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCCTT
T ss_pred HHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHCCCCC
T ss_conf 99999864876336864789888099189999964898179990078853898999607048999899999998337863
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~g~v~~aGd~~~~~~~~~~~a~~sG~~aA~~i~~a~~~ 370 (370)
T d2iida1 321 QFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 370 (370)
T ss_dssp HHHHHHHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 10234504306668779963201378851099999999999999864249
|
| >d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin(ogen) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=0 Score=27871.61 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~v~ipl~k~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs 80 (370)
T d3psga_ 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEECCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCC
T ss_conf 98981510735889988728289998761146455305555576464033134687799999986898389999967989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~~G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 160 (370)
T d3psga_ 81 NLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAP 160 (370)
T ss_dssp CEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECEEEEEEEEEEEEECCCCEECCCC
T ss_conf 82897865787332566621787564423679718999578359999999778650101211389999603674021456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w~v~~~~ 240 (370)
T d3psga_ 161 FDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDS 240 (370)
T ss_dssp CSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHCCCCEEEEEECCCCEEEEEEEE
T ss_conf 66644545674345688763453554054442226888605888771386378583330341158864135537998724
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 i~v~g~~~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~~~~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~ 320 (370)
T d3psga_ 241 ITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYIL 320 (370)
T ss_dssp EESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEE
T ss_pred EEECCEEEECCCCCCEEEECCCCEEECCHHHHHHHHHHHCCEEECCCCEEEECCCCCCCCEEEEEECCEEEEECHHHEEE
T ss_conf 87299677048970179845886275789999999998587260389677744226778619999899999988599399
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a 370 (370)
T d3psga_ 321 QDDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp ECSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ECCCEEEEEEEECCCCCCCCCCEEECHHHHCCEEEEEECCCCEEEEEECC
T ss_conf 82992899999744589889719998896667999998999999899649
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=100.00 E-value=0 Score=27871.38 Aligned_cols=1 Identities=0% Similarity=1.533 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~dvIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d3coxa1 1 TLADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 80 (370)
T ss_dssp CCCTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98888899799978478999999999878793999967899887654533221113455443334544445544543456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vGG~S~~~~~~~~r~~~~df~~~~~~~~~~~~~~~~y~~~e~~lgv~~~~~~~ 160 (370)
T d3coxa1 81 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 160 (370)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 67656535664445578862156420356555015865524897885223556873788999999999750876444776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~s~~~~~L~~a~~~g~~~i 240 (370)
T d3coxa1 161 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAAATGKLTI 240 (370)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSTTTTCSTTCCSSSBCCGGGTHHHHHHHTTCEEE
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 66788860889999999974986334664345565655444345531224522364443436837877899985898489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~t~~~V~~I~~~~~~~~~V~v~~~~~~~~~~~~~~~~A~~VILaAGai~Tp~LLL~S~~~~~l~~~s~~vG~~~g~~~~~ 320 (370)
T d3coxa1 241 TTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMKAQGHLPNLSSQVGEGWGVLLNK 320 (370)
T ss_dssp ECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTSCTTTTCCBSSCTTT
T ss_pred EECCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEECCEEEEEECHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
T ss_conf 73673899998499718999999588662322899989999995078885999996789897998877667885664575
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~g~~~~~~~~~~~d~~~~pg~~~~np~~t~~a~a~~~~~~~~~~~~ 370 (370)
T d3coxa1 321 ATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 370 (370)
T ss_dssp TSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 55666544687774576334366766768205379998878998875029
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27870.95 Aligned_cols=1 Identities=0% Similarity=-1.688 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
T d2iw1a1 1 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPA 80 (370)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 98999148899998999999999999977997999956787788886389986765544301158899999999986165
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
T d2iw1a1 81 DRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPER 160 (370)
T ss_dssp SEEEESSCCTTCSEEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGG
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCE
T ss_conf 52531036723789987622441046630474200040000067889999742157469982479999999860999642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~ 240 (370)
T d2iw1a1 161 FQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRK 240 (370)
T ss_dssp EEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHH
T ss_pred EEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 89997402222112467656666654304888663699998514554203332011123323322100000112222223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~ 320 (370)
T d2iw1a1 241 FEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEP 320 (370)
T ss_dssp HHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCC
T ss_conf 22222222222222223323344422233334443222234331133214577039993899718885279836998699
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~g~ 370 (370)
T d2iw1a1 321 FSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG 370 (370)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 99999999999997699999999999999999828547999999998485
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=100.00 E-value=0 Score=27870.52 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~v~~~g~~f~~nG~~~~~~G~N~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~ 80 (370)
T d1rh9a1 1 NNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQM 80 (370)
T ss_dssp CCCCEEETTEEEETTEEECEEEEECTTHHHHHHSTTTTHHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHH
T ss_pred CCCEEEECCEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99679989999999999999999526675011588999999999999998799199979856766765678887546788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~ 160 (370)
T d1rh9a1 81 FQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVA 160 (370)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986999999624443212687555410025777677521124899999999999999998641666765
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (370)
T d1rh9a1 161 YKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQ 240 (370)
T ss_dssp GGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTST
T ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16870365300036666677543688999999999999965899749984221456544656777444565110235688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~D~~~~h~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (370)
T d1rh9a1 241 GIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAK 320 (370)
T ss_dssp TCCCEEEECCHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 66088753246765567760245667788999999999757975998453676789988889999999999999999998
Q ss_pred -------------------------------------------------C
Q ss_conf -------------------------------------------------8
Q 001738 683 -------------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~G~~~W~~~~~~~~~~~dg~g~~~~d~~~t~~~~~~~~~~~~~~~ 370 (370)
T d1rh9a1 321 SGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 370 (370)
T ss_dssp TTCSEEEEEESCBCCTTCGGGCCSCCBCGGGCHHHHHHHHHHHHHHTTCC
T ss_pred HCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 58980899982154788767799845866897228999999999986249
|
| >d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Renal dipeptidase domain: Renal dipeptidase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27801.01 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~e~A~~lh~~~pViD~H~D~~~~l~~~~~~~~~~~~~~~~~~~~ghvDlprlr~Ggv~~q~faifv~~~~~~~~~~~ 80 (369)
T d1itua_ 1 DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVR 80 (369)
T ss_dssp CHHHHHHHHHHTTSCEEEEEECHHHHHHHHHTTCTTSGGGCTTTCCSSSCCHHHHHHTTEEEEEEEECCCGGGTTTTHHH
T ss_pred CHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCHHHHH
T ss_conf 94789999996489989834328999998733333444344355888865799999669987999998078777759999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~al~~id~~~~~~~~~~d~~~~~~s~~di~~a~~~gkiavil~iEg~~~l~~dl~~L~~~y~lGvR~i~Lt~n~~N~~a~ 160 (369)
T d1itua_ 81 RTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWAD 160 (369)
T ss_dssp HHHHHHHHHHHHHHHCTTTEEECCSHHHHHHHHHHTCEEEEEEEECGGGGTTCHHHHHHHHHTTEEEEESCSSSCCSSBC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 99999999999999688768973157899998743672788414345311256799999986495598722687887777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~g~~~~~~~GLt~~G~~~V~emn~lGmiiDlSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNl~De~l~aI 240 (369)
T d1itua_ 161 NWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLV 240 (369)
T ss_dssp BGGGGGTSSCCSSSSBCHHHHHHHHHHHHHTCEEECTTBCHHHHHHHHHHCSSCCEESSCCBTTTSCCTTSBCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCHHHHHHH
T ss_conf 75433577876678867678999998641481666487868899988612577456424026654033338998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~~GGviGi~~~~~fl~~~~~~~~~~~~~hi~~~~~l~G~dhVgiGsDfdg~~~~p~gl~~~~~~p~l~~~L~~rG~se~ 320 (369)
T d1itua_ 241 KQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEA 320 (369)
T ss_dssp HHHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHHHHTTCCHH
T ss_pred HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf 96597488850564212330236899999999999870952179865678999998777787788999999998699999
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------8
Q 001738 683 ------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------~ 683 (1019)
+
T Consensus 321 ~i~ki~g~N~lRv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (369)
T d1itua_ 321 EVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSS 369 (369)
T ss_dssp HHHHHHTHHHHHHHHHHHHHCCSSSCCCCCCCCGGGCCSSSCCCTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCC
T ss_conf 9999998869999999999998613876789984572765441578899
|
| >d1rwha1 a.102.3.2 (A:4-372) Chondroitinase AC {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Chondroitinase AC species: Arthrobacter aurescens [TaxId: 43663]
Probab=100.00 E-value=0 Score=27799.58 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~d~~~lr~rw~~~l~g~~~~~~~d~~~~~~l~~l~~~a~~~~~~~~~~~~~~~lW~dl~~~~sa~~~~~~~rl~~mA 80 (369)
T d1rwha1 1 PGAAEFAALRNRWVDQITGRNVIQAGDPDFAKAITALNNKAADSLAKLDAAAGRTSVFTDLSLAKDAEMVTTYTRLSQLA 80 (369)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCCCTTCHHHHHHHHHHHHHHHHHHHTBCCCTTCSCSBTTCCTTSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 96679999999999997488766657878999999999999999997335677666688887886278999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Ay~~pgs~~y~d~~l~~~I~~al~~l~~~~~~~~~~~~gNWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (369)
T d1rwha1 81 TAWATPTAAVFGDAAVLAAIKAGLADANTLCYNDRKEEVGNWWSWEIGVPRALADAMVLLHAELSAAERTAYCAAIDHFV 160 (369)
T ss_dssp HHHTSTTSTTTTCHHHHHHHHHHHHHHHHHTSSTTCCCCSCHHHHHTHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99819999542699999999999999997188789999999101532858999999998502179899999999999866
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 pdp~~~~~~~~~~~~~tGaNrvd~a~~~i~~glL~~d~~~v~~a~~~i~~v~~~vt~gdGf~~DgSf~qH~~~~Y~G~YG 240 (369)
T d1rwha1 161 PDPWLQFPPKRGKITSVGANRVDLCQGIIIRSLAGEDPTKLNHAVAGLSQVWQYVTSGDGIFRDGSFIQHSTTPYTGSYG 240 (369)
T ss_dssp SCTTEESCGGGCCEECCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHGGGGGSCBSSSSEEBTTSCEEETTTEECTTTHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCCCH
T ss_conf 78643346667752252009999999999999980899999999998641122245897423477636304442166425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~l~~~~~~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~m~~~v~GR~ISR~~~~~~~~g~~~~~~~~~la~~~ 320 (369)
T d1rwha1 241 VVLLTGLSKLFSLLGGTAFEVSDPTRSIFFDAVEGSFAPVMINGAMADAVRGRSISREANTGYDLGASAIEAILLLARAM 320 (369)
T ss_dssp HHHHHHHHHHHHHHTTSTTCCCCGGGHHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTSCHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999999999997799898887899999999995003462577116667887100788776168999999999998519
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------8
Q 001738 683 ------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~vk~~i~~d~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 369 (369)
T d1rwha1 321 DPATAARWRGLCAGWIARDTYRPILNSASVPRTALVKQLEATGVAPVAE 369 (369)
T ss_dssp CHHHHHHHHHHHHHHHHTCCSSCTTTTCCHHHHHHHHHHHHHTCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 9999999999999998718765544676522689999986067783889
|
| >d2ewoa1 d.126.1.6 (A:2-370) Agmatine iminohydrolase {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=0 Score=27798.19 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~tp~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~~~v~~~~~~~a~~~~~~~ 80 (369)
T d2ewoa1 1 AKRIKNTTPKQDGFRMPGEFEKQKQIWMLWPWRNDNWRLGAKPAQKAFLEVAEAISEFEPVSLCVPPLQYENALARVSEL 80 (369)
T ss_dssp CCEECSSCHHHHTCCCCCTTSCEEEEEECCCCCTTTSSGGGHHHHHHHHHHHHHHHTTSCEEEEECGGGHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC
T ss_conf 98567899301387878872416069998789986303578999999999999985898699998938999999998536
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~i~~~~~~~dD~W~RD~GP~~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~d~~~~~~ia~~~~~~~~~~~~lvlE 160 (369)
T d2ewoa1 81 GSHNIRIIEMTNDDAWIRDCGPTFLVNDKGDLRAVDWEFNAWGGLVDGLYFPWDQDALVARKVCEIEGVDSYKTKDFVLE 160 (369)
T ss_dssp TCCSEEEEECCCSSCCTTTSSCEEEECSSSCEEEEEEECCTTTTTTTCSSSCCTTHHHHHHHHHHTTTCCEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 77777999924797566134645898588988998533367765445545522457799999998736543466354875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 GG~ie~dG~GtlltT~~cll~~nRNp~~s~~~ie~~L~~~LGv~~viwL~~g~~~DdTdGHID~~arFi~~~tvl~~~~~ 240 (369)
T d2ewoa1 161 GGSIHVDGEGTVLVTEMCLLHPSRNPHLTKEDIEDKLKDYLNCVKVLWVKDGIDPYETNGHIDDVACFIRPGEVACIYTD 240 (369)
T ss_dssp GGGEEEETTTEEEEEHHHHTSTTSCTTSCHHHHHHHHHHHHCCSEEEEECCCSCTTTTSSCSTTTEEEEETTEEEEBCCC
T ss_pred CCCEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECC
T ss_conf 89789889985896445621667899989999999999985994799844766666667773206997289849997148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 d~~~~~y~~~~~~~~~L~~~~d~~G~~~~i~~lp~p~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP 320 (369)
T d2ewoa1 241 DKEHPFYQEAKAAYDFLSQQTDAKGRPLKVHKMCVTKEPCYLQEAATIDYVEGSIPREEGEMAIASYLNFLIVNGGIILP 320 (369)
T ss_dssp CTTSTTHHHHHHHHHHHHTCBCSSSCBCEECCBCBCSSCEECCCGGGSCCCCC-------CEECCBTTCCEEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEE
T ss_conf 87786579999999999987875699753885368975443333455444467664568988654236789999999990
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------8
Q 001738 683 ------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~yg~~~D~~Al~~l~~~fP~r~Vv~i~~~~l~~~gG~iHCiT~q~Pa~~ 369 (369)
T d2ewoa1 321 QYGDENDQLAKQQVQEMFPDRKVVGVRTEEIAYGGGNIHCITQQQPATL 369 (369)
T ss_dssp CCSCTTHHHHHHHHHHHSTTSEEEEECTHHHHTTSCCTTTTCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCEECCCCCCCCC
T ss_conf 1798678999999998888997999844698864975247164536899
|
| >d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: HD domain domain: Hypothetical protein aq 1910 species: Aquifex aeolicus [TaxId: 63363]
Probab=100.00 E-value=0 Score=27797.67 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~k~~~D~i~g~i~~~~~~~rii~s~~fqRL~~~~Ql~~~~~v~p~a~htR~~HSLgV~~lar~l~~~l~~~~~~~v~~A 80 (369)
T d2heka1 1 MIKEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLA 80 (369)
T ss_dssp CEEEEEETTTEEEEEEHHHHHHHTSHHHHGGGGSBTTTTGGGTSTTCCCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHH
T ss_pred CCEEEECCCCCCEECCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 95377359988886488999982997670345773478552338999566211998999999999999743328899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~LlHDiGh~PFsH~gE~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~d~ 160 (369)
T d2heka1 81 GLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGS 160 (369)
T ss_dssp HHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHHSHHHHHHHTTSCHHHHHHHHHHHHTCCSSHHHHHHHHHHHSTTCH
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
T ss_conf 99860265022204666620345520468998740179999998521236999999863246675204588775265101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Drldyl~rd~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~~~~~~~e~~~~~R~~m~~~vy~h~~~~~~~~~l~~~~~~~ 240 (369)
T d2heka1 161 DRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKL 240 (369)
T ss_dssp HHHHHHHHHHHHHTCCSSCCCCHHHHHTEEEETTEEEEEGGGHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 03433344465506767730199998877653400013563499999999999999899955478899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~d~~~~~~l~D~~i~~~L~~~~~~~~~~~~i~~R~l~K~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 320 (369)
T d2heka1 241 ISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEV 320 (369)
T ss_dssp TSSCCCSSTHHHHTCCHHHHHHHHHHCSTTHHHHHHHHSSCCCEEEEEESCHHHHHHHHHHHHHHSCGGGEEEEEEEECS
T ss_pred HHCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 86589788999973369999999985802519999998340252020167788899999999987442144401343445
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------8
Q 001738 683 ------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~i~i~~~~~l~~l~~~S~lv~~L~~~~~~riy~~~~v~e~~~~~~~ 369 (369)
T d2heka1 321 YGGNIYVLSSEGLKKAHELSPLIASLKPIKLYRIYVDRQLWEKARSELK 369 (369)
T ss_dssp CCSCCEEEETTEEEEHHHHCHHHHHCCCEEEEEEEECTTTHHHHHHTTC
T ss_pred CCCCEEEECCCCEEEHHHHCHHHHHHHHHHHEEEECCHHHHHHHHHHHC
T ss_conf 6777489639855583563699998688666378889999999998629
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Probab=100.00 E-value=0 Score=27796.26 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~g~~P~~l~~~y~~~~~~tG~gvtVaIid~G~~~~~~~Dl~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 80 (369)
T d1ga6a_ 1 AGTAKGHNPTEFPTIYDASSAPTAANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTGSSNGDYSDDQQGQGEW 80 (369)
T ss_dssp CCBCCCBCGGGHHHHTTCTTSCCEEEEEEEEEEESBCHHHHHHHHHHHHHTTCCCCCEEEEECSCTTSCCCBCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEE
T ss_conf 98887749899999739998889887489999617865678899999986599989977651799888888887721133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ld~~~~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~~~~~~~~~~~~~~~~~a~~~a~~~G 160 (369)
T d1ga6a_ 81 DLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQG 160 (369)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 24500001015686499999957999865699999999999758986244244322457886168999999999999789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggg~s~~~ 240 (369)
T d1ga6a_ 161 QTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYE 240 (369)
T ss_dssp CEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEE
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 78998179876557678898766543434665688402333100135777765442021356787755335789866656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~P~~~~~~~~~~~~r~~pdv~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~vAGvvALi~~a~~~~~G~~n~~ly~~~~~ 320 (369)
T d1ga6a_ 241 SKPSWQSVVSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVGLWARLQSANSNSLGFPAASFYSAISS 320 (369)
T ss_dssp ECCGGGGGSTTSCSEEEECSEEEECCGGGCEEEEETTEEEEECSHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEECCEECCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 67543334422578852201102467875048726854666578753113899999999863567668768899998864
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------8
Q 001738 683 ------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~di~~g~n~~~~~~~~a~~G~d~~tG~G~~d~~~l~~~~~s~~~ 369 (369)
T d1ga6a_ 321 TPSLVHDVKSGNNGYGGYGYNAGTGWDYPTGWGSLDIAKLSAYIRSNGF 369 (369)
T ss_dssp CGGGEECCCSCBSSSTTCSCBCCSSSBTTTBTCEECHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHCCC
T ss_conf 7665204445888888887678678988956724379999999986699
|
| >d1laxa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27794.17 Aligned_cols=1 Identities=0% Similarity=0.039 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 k~~eg~ltvW~~~~~~~~~~~~~~~~fe~~~gv~V~v~~~~~~~~kl~~~~~~g~~pDv~~~~~~~~~~~~~~g~l~~L~ 80 (369)
T d1laxa_ 1 KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTDPKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT 80 (369)
T ss_dssp CCCTTSEEEECCTTSCHHHHHHHHHHHHHHHCCCEEEECCTTHHHHHHHHHTTTCSCSEEEEEGGGHHHHHHTTCBCCCC
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCC
T ss_conf 98630899996798316999999999865219879999688799999999866999869998908899999879967588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~dG~~ygiP~~~~~~~~~ynkd~~~~~p~Tw~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (369)
T d1laxa_ 81 PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL 160 (369)
T ss_dssp CCHHHHTTBCHHHHHHTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCCSSGGGTHHH
T ss_pred HHHHHHHHHHHHHHHHCEECCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 44533455468898653489999897510220135775000112110057899876442037875632577764004899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~~~~ 240 (369)
T d1laxa_ 161 IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV 240 (369)
T ss_dssp HHHTTCEEEEECSSCEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTSEEEEEECGGGHHHHHHHTC
T ss_pred HHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEECCHHHHHHHHCCCC
T ss_conf 98717720002355544454455778999999999998752764444552677765515775687416577540011245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~p~~~~~~~~~~~~~~~~~i~~~s~~~~~A~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (369)
T d1laxa_ 241 NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT 320 (369)
T ss_dssp CEEEECCCBBTTBCCCCEEEEEEEEEBTTCSCHHHHHHHHHHTTSSHHHHHHHHHHSCCCEESBHHHHHHHTTSHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHH
T ss_conf 61376314555677655556435664057855899999999864899999999973898865133200444439489999
Q ss_pred ------------------------------------------------C
Q ss_conf ------------------------------------------------8
Q 001738 683 ------------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~s~~eal~~~~~~it 369 (369)
T d1laxa_ 321 MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT 369 (369)
T ss_dssp HHHHHHSEECCCSTTHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 9999608007888568999999999999998399999999999998519
|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin motor Ncd (non-claret disjunctional) species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=0 Score=27721.12 Aligned_cols=1 Identities=0% Similarity=-0.693 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gnIkV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~ 80 (368)
T d2ncda_ 1 LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQS 80 (368)
T ss_dssp CCSSSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCGGGTTSCBCEEEEETTTEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCCCCEEEECCCCEEEECC
T ss_conf 91589999999999999999999999999999999874899756997999990789901027898579957998699706
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf 160 (368)
T d2ncda_ 81 IDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLF 160 (368)
T ss_dssp SCHHHHTTTCCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHH
T ss_conf 88655677686466778587999986214999998898775036513773115787560671366644344667999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~ 240 (368)
T d2ncda_ 161 DSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATA 240 (368)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEEECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf 45443202455526899999886560201256421354311302666442334430220477788999999987511244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~t~~n~~ssrSh~i~~i~v~~~~~~~~~~~~s~l~~VDLAGse~~~~~~~~~E~~~IN~SL~aL~~vi~aL~~~~~~iPy 320 (368)
T d2ncda_ 241 STAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPY 320 (368)
T ss_dssp SSSCTTTTTTCEEEEEEEEEEECTTSCCEEEEEEEEEECCCCCCC----------CTTHHHHHHHHHHHHHHTTCSCCCG
T ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 22146545554327899999976698856765444422010233102321024552026499999999998658998997
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
.
T Consensus 321 R~SkLT~lL~dsLggns~t~mI~~isp~~~~~~eTl~TL~fa~rak~~ 368 (368)
T d2ncda_ 321 RNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSC 368 (368)
T ss_dssp GGSHHHHHHGGGSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 578889998985599870999999798735499999999999997569
|
| >d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=27720.55 Aligned_cols=1 Identities=0% Similarity=-0.693 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~k~ltfdDVlLvP~~sti~srdVdls~~~~~~~~l~iPIiss~MDtV~~~~mA~~la~~Gglgvlhr~~~~ 80 (368)
T d2cu0a1 1 KFVEKLEKAIKGYTFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGI 80 (368)
T ss_dssp CHHHHHHTCCCCCCGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCH
T ss_pred CHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCH
T ss_conf 96788998876288000898589776766563653796188314889895798776888999999978996575064898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 e~~~~~v~~v~~~e~~~~~~~d~~~~~~v~~~~~~~~~~r~~~l~~aGvd~ivID~A~Gh~~~~i~~lK~ir~~~~~~vI 160 (368)
T d2cu0a1 81 EEQVEQVKRVKRAEKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFI 160 (368)
T ss_dssp HHHHHHHHHHHTCCCCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTCCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999887433444324101366763799932572778999999983998798437542012456666554121043132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 aGNVaT~e~~~~l~gaD~VkVGIG~Gs~CTTr~~tGvG~Pq~sAi~e~~~~~~~~~~~iiADGGi~~~Gdi~KAla~GAd 240 (368)
T d2cu0a1 161 VGNIANPKAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGAD 240 (368)
T ss_dssp EEEECCHHHHTTCTTSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred ECCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHEEEEECCC
T ss_conf 21136799997652276214445675555332112423434789999999875249706845887867721135664132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~VMlG~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~~~~~~EG~~~~v~~~G~~~~~l~~l~ 320 (368)
T d2cu0a1 241 AVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLV 320 (368)
T ss_dssp EEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHHH
T ss_pred EEECCCHHCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 35305311142235773671599270135676642211357752223555333444378832885078888899999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
-
T Consensus 321 gglrs~m~y~G~~~l~e~~~~~~f~~vt~a~~~E~~~h~~~~~~~~~~ 368 (368)
T d2cu0a1 321 GGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESHPHDIIITNEAPN 368 (368)
T ss_dssp HHHHHHHHHTTCSBHHHHHHHCCEEECCHHHHHHHSCCSSCCSCCCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCC
T ss_conf 999999876286509998509789999954142467877366356899
|
| >d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamate-cysteine ligase family 2 (GCS2) domain: Carboxylate-amine ligase YbdK species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27719.66 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~f~~~~~~tiGvE~E~~lvd~~~~~~~~~~~~ll~~~~~~~~~~~i~~El~~~qiEl~t~p~~~~~e~~~~l~~~~~~ 80 (368)
T d1r8ga_ 1 LPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKV 80 (368)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEETTTTEECSCCHHHHTTTSSSCSSSEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999983489876543679987667757999997222246886310467766998077779999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~g~~P~~~~~~~~~~~~~ry~~~~~~~~~~~~~~~~~g~hv~~~~~d~~~~~~~~~~~~~~~p~l~ 160 (368)
T d1r8ga_ 81 VLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFI 160 (368)
T ss_dssp HHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEECSSHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99987655875244575212672215577508999998742707888764256031168999999999999999868998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 aL~anSP~~~G~~tg~~s~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vRp~~~~~~iEiR~~D 240 (368)
T d1r8ga_ 161 ALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMD 240 (368)
T ss_dssp HHHCCBCEETTEECSCSBCGGGGGTTSTTCSSCCCCSSHHHHHHHHHHHTTSSSCSSGGGCCCSEEEETTTTEEEEEEEE
T ss_pred HHHCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 88528663358677886775267750876565430001120799999998556445677056316876466742124789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~p~~~~~~~~aa~~~~l~~~l~~~~~~~~~~~~~~~~~~n~~~aar~Gl~~~l~~~~~~~~~~~~~~~~~Ll~~~~~~l 320 (368)
T d1r8ga_ 241 TPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSA 320 (368)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHCCCCCCGGGGTTHHHHHHHHHHHGGGSEEECTTTCCEEEHHHHHHHHHHHSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH
T ss_conf 99988999997568887888998617877640448999999998876144411000689967689999999999999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~lg~~~~l~~l~~~v~~g~t~A~~lr~~~~~~gsl~~~v~~~~e~~~ 368 (368)
T d1r8ga_ 321 HKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWA 368 (368)
T ss_dssp HHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHTTCCHHHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
T ss_conf 978898999999999982999999999999818999999999998739
|
| >d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27719.44 Aligned_cols=1 Identities=100% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~dPR~iLkr~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T d1f52a2 1 DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYF 80 (368)
T ss_dssp TTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCCSS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 98879999999999997699870378854288999421035576777565577322456887666887787655577615
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~~~E~~~~gq~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~Gl~atFmpKP~ 160 (368)
T d1f52a2 81 PVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPM 160 (368)
T ss_dssp BCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSCSS
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 53001107889999999888622570564223456784322078786577889999999999999997436334741568
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~GsG~HiH~Sl~~~~~n~~~~~~~~~lS~~~~~fiaGll~~~~~~~al~~PtvNSYkRl~~~~~aP~~~~Wg~~NR~ 240 (368)
T d1f52a2 161 FGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRS 240 (368)
T ss_dssp TTSCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGGTSSSCSSCCCEEEEESSCTT
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCCCC
T ss_conf 89877532589874159985656555556489999999999986699899977996077652477768743452367655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~iRi~~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~lP~sl~eAl~a 320 (368)
T d1f52a2 241 ASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEIPQVAGSLEEALNA 320 (368)
T ss_dssp EEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHH
T ss_pred CCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHH
T ss_conf 31464025788662478447880177789999999976542421589999777872448976762320151379999999
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
.
T Consensus 321 l~~d~~~~~a~~~lGe~~v~~y~~~K~~E~~~~~~~vt~wE~~~Yl~~ 368 (368)
T d1f52a2 321 LDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV 368 (368)
T ss_dssp HHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTTC
T ss_pred HHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
T ss_conf 964978788765156999999999999999999679999999741689
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=27718.40 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~g~a~~~~a~~~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~spDg~~i~ 80 (368)
T d1mdah_ 1 EKSKVAGSAAAASAAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFA 80 (368)
T ss_dssp CCCCCCSHHHHHHHTTCCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEE
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCEECCCCCEEE
T ss_conf 94121200000123445679866645589876126972045788621799708998377888578777513989998899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~ 160 (368)
T d1mdah_ 81 LASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ 160 (368)
T ss_dssp EEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEE
T ss_pred EECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEE
T ss_conf 97556764010356786999989999383064378542102468864058878998999996899859999899893867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~ 240 (368)
T d1mdah_ 161 LTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240 (368)
T ss_dssp EEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCS
T ss_pred EEECCCCCEECCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEEEEEECC
T ss_conf 86046752374699823999948998899982689626665303111356664660101558689993489779996069
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a 320 (368)
T d1mdah_ 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAII 320 (368)
T ss_dssp SCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEE
T ss_pred CCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCCCCEEEEE
T ss_conf 93699760246543045540127883568871799879998358973340588649999899994868955899651799
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
-
T Consensus 321 ~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~~P~~l~~~~~a 368 (368)
T d1mdah_ 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNEA 368 (368)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCCC
T ss_pred ECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCC
T ss_conf 998999899999489996999989999799998799998789973489
|
| >d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Glutamine aminotransferase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27717.46 Aligned_cols=1 Identities=100% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~la~~~~~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~~ 80 (368)
T d1v2da_ 1 MRLHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPES 80 (368)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHHHTCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGG
T ss_pred CCCCHHHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 97782345467879999999864399889459889998899999999998602568899867899999997525557741
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~ 160 (368)
T d1v2da_ 81 VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNT 160 (368)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEES
T ss_pred EEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
T ss_conf 26515307888777650444456532358850134567875177320001354345444788999975335765999769
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~ 240 (368)
T d1v2da_ 161 PMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240 (368)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98866666999999999999998498265223333220333333222223344503641455323454322211144223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~~~~~~ 320 (368)
T d1v2da_ 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWDAF 320 (368)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCCHH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHH
T ss_conf 32002221012332233333222222333221025788999999865322456876694786688306999968950899
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
.
T Consensus 321 ~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~i~~ai~rL~~~l 368 (368)
T d1v2da_ 321 RLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVV 368 (368)
T ss_dssp HHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 999969999996233078999899899996499999999999999869
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=0 Score=27716.63 Aligned_cols=1 Identities=0% Similarity=0.171 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 Tid~~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~ 80 (368)
T d1pyya4 1 TISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMM 80 (368)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 93979999999999999997089569999999999939999967988854236766103443265517668863054699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~aaaLe~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vtl~~al~~S~N~~~~~l~~~lg~~~~~~~~~~~G~~~ 160 (368)
T d1pyya4 81 LAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGV 160 (368)
T ss_dssp HHHHHHTTCCCTTCEEECCCEEETTEEECCEETTTEECCSCEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTTTS
T ss_pred HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 99864023332222222101102444432345544334880456999997532454143210358244789998753487
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~e~~g~~p~~~~~~~~~~~~G~~~~~tplq~a~aya~iANgG~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~i 240 (368)
T d1pyya4 161 PTRFGLTDEYAGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPV 240 (368)
T ss_dssp CCCCSCSSCCCCBCCCSSHHHHHHGGGTCSCBBCHHHHHHHHHHHHTTTCEECCBCEEEEEEGGGTEEEECCCCEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCC
T ss_conf 42245433233467643320000222346655107888867789854876205579888866876410134432344443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~m~~~v~~~~~~~~~~~gtg~~~~~~~g~~vaGKTGTaq~~~~~~~~~~~~~~~~~~~fvg~~P~~~P~~ 320 (368)
T d1pyya4 241 SKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDF 320 (368)
T ss_dssp CHHHHHHHHHHHHHHHHCTTTCTTEETTTTEESSCCTTSCCEEEEEEEECBCSSSSSBCCSTTCEEEEEEEEESSSSCSE
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCE
T ss_conf 27899999999987531145542676046531213799506678822201477788501366565699999957589959
Q ss_pred -----------------------------------------------C
Q ss_conf -----------------------------------------------8
Q 001738 683 -----------------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------------~ 683 (1019)
.
T Consensus 321 ai~V~v~~p~~~~g~~gg~vAapi~~~i~~~~~~l~~~~~~~~~~~~~ 368 (368)
T d1pyya4 321 ILYVTVQQPEHYSGIQLGEFANPILERASAMKDSLNLQTTAKALEQVS 368 (368)
T ss_dssp EEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTGGGCTTSCCSTTTTCC
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999999778867887306899999999999997743589999724489
|
| >d1o7xa_ a.103.1.1 (A:) Citrate synthase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Citrate synthase superfamily: Citrate synthase family: Citrate synthase domain: Citrate synthase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27645.94 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~GL~gv~~~eT~IS~id~~~G~L~YRG~~i~dLa~~~sFEEva~LL~~G~LPt~~el~~f~~~L~~~~~lp~~v~~~ 80 (367)
T d1o7xa_ 1 VVSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYGSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVLDT 80 (367)
T ss_dssp CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 97977799837588680386898879998874999861599999999997798969999999999999863581999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~~~p~~~hpm~~l~~~vsal~~~d~~~~~~~~~~~~a~~l~A~~p~i~a~~~r~~~g~~~~~p~~~~s~~~~~~~~~~~ 160 (367)
T d1o7xa_ 81 IYLMPKEADAIGLLEVGTAALASIDKNFKWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAKSFLLASFA 160 (367)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHS
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 98601230146788888998765300234321110167789989999999999876489877885034468887654048
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~l~~~lvl~adHg~n~Stfa~r~~aSt~~d~~~~~~aa~~~l~Gplhgga~~~~~~~l~~~~~~~~~~~~~ 240 (367)
T d1o7xa_ 161 REPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDPNRVQNWF 240 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSGGGHHHHH
T ss_pred CCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
T ss_conf 88506777776567400015788854300001451376422114667776045434673799999999633654237899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~i~GfGH~vy~~~DPR~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~pNvd~~~~~l~~~ 320 (367)
T d1o7xa_ 241 NDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYA 320 (367)
T ss_dssp HHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99986147754167875343566228999999999865046512699999999999998534589986838999999998
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
.
T Consensus 321 lG~p~~~~~~lf~~~R~~G~~AH~~Eq~~~~~~l~RP~~~Y~Gp~~~ 367 (367)
T d1o7xa_ 321 LGFPVYMFTALFALSRTLGWLAHIIEYVEEQHRLIRPRALYVGPEYQ 367 (367)
T ss_dssp HTCCGGGHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEECSCSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC
T ss_conf 09786778899999999999999999985789841866510098999
|
| >d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Dihydroorotate dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27645.90 Aligned_cols=1 Identities=0% Similarity=-1.124 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~e~ah~~~~~~~~~~~~~~~~~~~~~~L~v~~~Gl~~~nPi~lAsG~~~~~~~i~~~~ 80 (367)
T d1d3ga_ 1 MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPRARFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLY 80 (367)
T ss_dssp CCSCCHHHHHHTHHHHHHHHSCHHHHHHHHHHHHHTTCCC---CCCCGGGCEEETTEEESSSEEECTTSSTTSSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCCCCEECCCCCCCHHHHHHHH
T ss_conf 97770899999999999865898999999999998337553236898777568899866998676848787899999986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~G~G~vv~kTit~~~~~gn~~pr~~~~~~~~~~~n~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~pv~vsi~~~~~~~ 160 (367)
T d1d3ga_ 81 KMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSV 160 (367)
T ss_dssp HHTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCS
T ss_pred HCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCH
T ss_conf 35874786134246632457760322102111211224767754699998888875411343436863899834654507
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~ad~lelNiScPn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~vKlsP~~~~~~i~~~a 240 (367)
T d1d3ga_ 161 DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp CHHHHHHHHHHHHGGGCSEEEEESCCTTSTTC----CHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 88888877777765314400245000321122210111101257888887653202245776301247641000134467
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~g~~gi~~~nt~~~~~~~~~~~~~~~~gg~sG~~~~~i~l~~v~~v~~~~~~~ipIig~GGI~s~~Da~e~i~aG 320 (367)
T d1d3ga_ 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCC
T ss_conf 88876543102113332234454344211244321121110230889999999738995199988979999999999839
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
.
T Consensus 321 As~VQi~Ta~~~~Gp~ii~~I~~~L~~~l~~~G~~si~dl~G~a~~~ 367 (367)
T d1d3ga_ 321 ASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR 367 (367)
T ss_dssp CSEEEESHHHHHHCTHHHHHHHHHHHHHHHHTTCSSHHHHTTGGGGC
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHCCC
T ss_conf 97887417788239079999999999999984999899962802269
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=100.00 E-value=0 Score=27644.36 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~i~~~~e~~~lp~~~~~~~~~~~~~y~~a~~~s~~~~a~e~~~~~~~~~~~~~~~~~~~p~~ 80 (367)
T d1iuqa_ 1 ASHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFV 80 (367)
T ss_dssp CCCCCGGGGCCSHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 98641322266589999999999855789857999999999999999973489995089999999999888741478743
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 f~~~h~~~~~~~~~~~~~~~~~~~li~~~~s~v~~~~~l~~~~Ekl~~g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r 160 (367)
T d1iuqa_ 81 FSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAE 160 (367)
T ss_dssp CCSEECCCCSSSCHHHHHHHHHGGGBCGGGCEEECHHHHHHHHHHHHTTCEEEEEECCCCTTHHHHHHHHHTTTCHHHHH
T ss_pred CCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 67521000578778999999999986478777815789999999860799779987885400389999998512656210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~ 240 (367)
T d1iuqa_ 161 NTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPS 240 (367)
T ss_dssp HCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTT
T ss_pred CEEEEEEHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf 33898545562257789999748878995465444563101002233268899999986168759999456764676666
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 dg~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~ 320 (367)
T d1iuqa_ 241 TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHK 320 (367)
T ss_dssp TCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEECGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSS
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHCC
T ss_conf 66505665575505899999855799956856044133425887543320001036677861488679735666300022
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~e~~ea~~k~l~d~v~eq~~~Lk~ai~gk~~~~~~~p~~~~~qp~ 367 (367)
T d1iuqa_ 321 NPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW 367 (367)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCGGGGCCSSCCEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 63889999999999999999999999985689822258888878999
|
| >d1b65a_ d.154.1.1 (A:) L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: DmpA/ArgJ-like superfamily: DmpA/ArgJ-like family: DmpA-like domain: L-aminopeptidase D-Ala-esterase/amidase DmpA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27642.18 Aligned_cols=1 Identities=0% Similarity=0.072 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 r~r~R~lGi~~~~~pGp~N~ITDV~GV~VGH~T~~~g~~~~~~~~~~~TGvTvIlp~~g~~~~~~v~ag~~~~~g~~~~~ 80 (367)
T d1b65a_ 1 KPRARDLGLPFTGVTGPYNAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGEMT 80 (367)
T ss_dssp CCCGGGGTCCCCSCBCTTSSGGGSTTCEEEEEEEECSSCCTTCSSCCEEEEEEEETTTTCSSCCCEEEEEEEEEESSCBC
T ss_pred CCCHHHCCCCCCCCCCCCCCEECCCCCEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 97567539887888799875014798566223644687654679986711799971899756786055561368876678
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~v~e~g~~~~aIvLTggsa~Glaa~~~v~~~l~~~~~g~~~~~~~~vvPiV~~~~D~~l~d~~~~~~~~~~~~~A~~ 160 (367)
T d1b65a_ 81 GTHWIEDGGYFLGPVVITNTHGIGMAHHATVRWMVDRYASTYQTDDFLWIMPVVAETYDGALNDINGFPVTEADVRKALD 160 (367)
T ss_dssp SHHHHHHHCEECSCEEEEEGGGHHHHHHHHHHHHHHHTHHHHSSSSCCCCCCEEEEECCTTTSCGGGCCCCHHHHHHHHH
T ss_pred CHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 05653547753677987567248888789999999856888777885210451279980677876678988999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~A~~~~v~~G~VGAGtGa~~~~~KGGiGtASr~~~~~~~~~tVGaLV~~N~g~~~~~~~~g~p~g~~l~~~~~~~~~~~~ 240 (367)
T d1b65a_ 161 NVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFGGRSFTIGALVQANHGQRDWLTIAGVPVGQHMRDGTPQSQLQER 240 (367)
T ss_dssp TCBSSCCCCBSCGGGTTCEETTEECEEEEEEEEEEETTEEEEEEEEEEECCCCGGGCCBTTBCHHHHCCTTCHHHHC---
T ss_pred HHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 75228877887573211321356787521267887178835999999744788500240775200131445777777889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 nTtI~VVATDApL~~~ql~RlA~~A~~GlARai~p~ht~dGD~vfA~STg~~~~~~~~~~~~~~~~~l~~~~l~~lf~Aa 320 (367)
T d1b65a_ 241 GSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNSGDIFIAFSTANQRPMQHRSAPFLDVEMVNDEPLDTVYLAA 320 (367)
T ss_dssp -CEEEEEEECSCCCHHHHHHHHHTHHHHHHTTTCCCCTTCEEEEEEEECCSCCCCGGGSCSEEEEEEECSGGGHHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHH
T ss_conf 98899999598189999999999865315312677779984779994057867766556554441004720008899999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
-
T Consensus 321 aea~eeAI~nal~~A~t~~G~~~~~~~~~alp~d~~~~~~~~~~~l~ 367 (367)
T d1b65a_ 321 VDSVEEAVVNAMIAAEDMGGTPFDRLLVQAIDHERLRAVLRQYGRLA 367 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEECSTTCSCEECCCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCC
T ss_conf 99999999999974677657589987741799999999999846679
|
| >d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27641.02 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~Y~~~~~lR~~~Pv~~~~~~w~vt~~~di~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (367)
T d1ue8a_ 1 MYDWFKQMRKESPVYYDGKVWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHDELR 80 (367)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECCHHHHHHHHTCTTTEECCCSSTTTTHHHHHTTCCCCCCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 90899999856998844998998799999999669853537765567542224466432224555552006867875667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~f~~~~l~~~~i~~~~~~ll~~l~~~~d~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ue8a_ 81 NLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALRLGRADEIFSI 160 (367)
T ss_dssp HHHHGGGSGGGSCHHHHHHHHHHHHTTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSSSSSTTTCC
T ss_pred HCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 30133478665144999999999986303345316665543444210110464211026778888877620004799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~~~ 240 (367)
T d1ue8a_ 161 GRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREKGA 240 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHH
T ss_conf 99999999999999986423431012344441347777764133210010111222101023777633000111345556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~ai~E~lR~~p~~~~~~r~~~~~~~l~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~P~R~~~~~l~FG~G~r~C~G~ 320 (367)
T d1ue8a_ 241 LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPHLSFGSGIHLCLGA 320 (367)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECSSCEEEECHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCCSTTSCTTH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 77877645205532334432344310221134048754433210035766689722018798999988779987188119
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
.
T Consensus 321 ~lA~~e~~~~l~~Ll~rf~~~~~~~~~~~~~~~~~g~~~l~Vr~~r~ 367 (367)
T d1ue8a_ 321 PLARLEARIALEEFAKKFRVKEIVKKEKIDNEVLNGYRKLVVRVERT 367 (367)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEEEEEEECSCSSBCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 99999999999999985896634898534587758975236999979
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=100.00 E-value=0 Score=27641.48 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~v~VIVVGsG~aG~v~A~rLaeaG~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (367)
T d1n4wa1 1 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 80 (367)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95709996769899999999977959199991689988766565422222344544333334433543321235677766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~g~~lGG~S~i~~~~~~r~~~~~f~~~~~~~~~~~~l~pyy~~ae~~l~~~~~~~~~~~~~ 160 (367)
T d1n4wa1 81 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 160 (367)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 66566740223688652135776378873224360006866742232245738899999999998829877888866667
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~k~s~~~~yl~~a~~~gn~~i~~~t 240 (367)
T d1n4wa1 161 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLH 240 (367)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSSBCCTTTTHHHHHHHTTSEEEEESE
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCC
T ss_conf 78728899999998738642235323224875555655567631246433445654467667623789758980998787
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~V~~I~~~~~g~~~v~v~~~~~~~~~~~~~~i~Ak~VVLaAGai~Tp~LLl~S~~~g~l~~~s~~lG~~~~~~l~~~~~~ 320 (367)
T d1n4wa1 241 QVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGCVLGKATDD 320 (367)
T ss_dssp EEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTCCTTTTCCBSSCTTTTBCT
T ss_pred EEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCEEEEECCHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCC
T ss_conf 89998985899889999997777752049998648999906523079999847777999986676667865545644456
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
.
T Consensus 321 ~g~~~~~~~~~~~~g~~i~~~~~~~p~~t~~ala~~~~~~~~~~~~~ 367 (367)
T d1n4wa1 321 YGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDVT 367 (367)
T ss_dssp TSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 66435877730347743568687893340799998799999885459
|
| >d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: D-maltodextrin-binding protein, MBP species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=100.00 E-value=0 Score=27639.19 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 qTIt~w~~~~~~~~~~~~~~~~~F~~~~p~~~v~~~~~~~~~~~~~l~~~~~ag~~pDi~~~~~~~~~~~~~~~g~l~~L 80 (367)
T d1ursa_ 1 QTITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPV 80 (367)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHHHHHHCCEEEEEECTTCTTCTTHHHHHHHTTCCCSEEEEEEGGGHHHHHHTTCBCCC
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC
T ss_conf 97999827884579999999999999879989999848828999999999966999839998582789999987995400
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~l~yNk~~~~~~p~T~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T d1ursa_ 81 PSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYG 160 (367)
T ss_dssp CTTSCCGGGSCHHHHHTTEETTEECSEEEEEEECEEEEETTTCSSCCCSHHHHHHHHHHHCEECCTTCHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCHHHHHHCEECCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 24554411479778854638877876420354158887401023431008999999866303667777521068887541
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~g~~~~~~~~~~~~~~~~ 240 (367)
T d1ursa_ 161 GYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKAKIDFGV 240 (367)
T ss_dssp CEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTSCSCCTTCCHHHHHHHHHTTCCSEEEECGGGHHHHHHTTCCEEE
T ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 02211588644543135588889999999999986136564222037788888527741103366665444441156326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~P~~~~g~~~~~~~~~~~~~i~~~s~~~e~A~~fl~~l~s~e~q~~~~~~~g~~P~~~~~~~~~~~~~~~~~~~~~~~ 320 (367)
T d1ursa_ 241 TPWPTLPNGKHATPFLGVITAFVNKESKTQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVEQ 320 (367)
T ss_dssp ECCCCCTTSCCCCCEEEEEEEEEBTTCSCHHHHHHHHHHHTSHHHHHHHHHHHCCEESSHHHHTSHHHHTCHHHHHHHHH
T ss_pred EECCCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCHHHHHCHHHHHHHHH
T ss_conf 63365788664310005654010210131688999999850699999999971988873767739553209389999999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~t~~~al~~~~~~i~kg 367 (367)
T d1ursa_ 321 LRYAVPMPNIPQMQAVWQAMSILQNIIAGKVSPEQGAKDFVQNIQKG 367 (367)
T ss_dssp GGGCEECCCSTHHHHHHHHTTHHHHHHHTSSCHHHHHHHHHHHHHC-
T ss_pred HHHCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
T ss_conf 95083178785489999999999999829899999999999998576
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27642.22 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~i~~~i~g~f~E~lg~~i~~g~~~~~~~~~~~~G~R~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~ 80 (367)
T d1qw9a2 1 EIDKRIYGSFIEHLGRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDL 80 (367)
T ss_dssp ECCGGGGEEECCSSTTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEET
T ss_pred CCCHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98824424406543573207664799998887665999999999639987865886136705212365986778886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g~~~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~ 160 (367)
T d1qw9a2 81 AWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRGIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMD 160 (367)
T ss_dssp TTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSCCHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCC
T ss_conf 88876767777899999999809838999837974099999999997068988889999871887888732899635111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~~g~~~~~~Y~~~~~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~~~~~iD~is~H~Y~~~~~~~~~~~ 240 (367)
T d1qw9a2 161 GPWQIGHKTAVEYGRIACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHTYDHVDYISLHQYYGNRDNDTANY 240 (367)
T ss_dssp STTSTTCCCHHHHHHHHHHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHHGGGCSEEEEEEEECCTTCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 56555788999999999999998760299836999868877776555289999861311577022347778875512455
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy~~~~~~~~~~~~~~~~~~l~~~~tl~~AL~~A~~L~~~ 320 (367)
T d1qw9a2 241 LALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWYHSNEADKLIEPWTVAPPLLEDIYNFEDALLVGCMLITL 320 (367)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECCTTHHHHTTCCTTBSSCCTTCCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 55677799999999999999874046778851886224564454555555554233755312237699999999999999
Q ss_pred ----------------------------------------------C
Q ss_conf ----------------------------------------------8
Q 001738 683 ----------------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------------~ 683 (1019)
.
T Consensus 321 ~R~sD~V~mA~~A~lvNvl~~i~~~~~~~~~~~~~y~v~~~~s~~~r 367 (367)
T d1qw9a2 321 MKHADRVKIACLAQLVNVIAPIMTEKNGPAWKQTIYYPFMHASVYGR 367 (367)
T ss_dssp HHTTTTEEEEEEECSBSSSCSEEECTTSCEEECTTHHHHHHHHHHCC
T ss_pred HHCCCEEEEEEHHHHHHHHCCEEECCCCCEEECCCHHHHHHHHHHCC
T ss_conf 97259556540337664102148659998610751199999998529
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27571.23 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~ 80 (366)
T d1hz4a_ 1 EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQM 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 94430566213999999999999888999999999999854868996799999999999999879999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~ 160 (366)
T d1hz4a_ 81 ARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 160 (366)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 87501148999999888788788888999998899999986750341256788899888789998145666689999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 240 (366)
T d1hz4a_ 161 EVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTA 240 (366)
T ss_dssp HHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 87663002468999988888887646678888999999999987311572699999999999986044898999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l 320 (366)
T d1hz4a_ 241 KPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 320 (366)
T ss_dssp CCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 76224666777889999999987587999999999999887642667479999999999999878999999999999997
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~e~e~~~a~~ll~~in 366 (366)
T d1hz4a_ 321 ANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREIN 366 (366)
T ss_dssp HHHHCCCHHHHTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 6531829999999999999999998659986999999999987559
|
| >d1moqa_ c.80.1.1 (A:) "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SIS domain superfamily: SIS domain family: double-SIS domain domain: "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27568.03 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~m~kEI~eQP~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~I~~vG~GsS~~aa~~~~~~~~~~~~~~v 80 (366)
T d1moqa_ 1 GDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPC 80 (366)
T ss_dssp CCCTTCSSHHHHHHHTHHHHHHHHHTTSEETTEECCGGGCSSHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999861788999889999999999876368620543103068887308889999822899999999999998439204
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~sef~~~~~~~~~~~lvI~iSqSG~s~~ti~a~~~a~~~g~~~ti~iT~~~~S~la~~ad~~i~~~~g~E~~~~~T 160 (366)
T d1moqa_ 81 DVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVAST 160 (366)
T ss_dssp EEEEHHHHHTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCCCSSSCS
T ss_pred EEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 99965445244345699987998620589635899999999749973899989999978986074632356654220000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 k~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~~g~A~E~ 240 (366)
T d1moqa_ 161 KAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEG 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHTTCSEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
T ss_conf 57899999999999986442032026778779999998876889987777899899997367526996577758999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 aLKl~E~~~~~a~~~~~~Ef~HGP~~~i~~~~~vi~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i 320 (366)
T d1moqa_ 241 ALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHII 320 (366)
T ss_dssp HHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHHHHHHHTGGGTCCEEEEEEGGGCCCCBTTEEEE
T ss_pred HHHHHHHHHHEEEEECHHHHHCCCHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 99999887674785037776277430230796089846898177999999999997498299996687322445775699
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~p~~~~~l~pl~~~ip~Qlla~~~A~~~G~~PD~Pr~L~K~vtve 366 (366)
T d1moqa_ 321 EMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE 366 (366)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHHHHHHHTCCSSSCTTCCSCCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
T ss_conf 6699756787999999999999999998198999999998785319
|
| >d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Cytochrome P450 superfamily: Cytochrome P450 family: Cytochrome P450 domain: Cyp119 species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=0 Score=27565.38 Aligned_cols=1 Identities=0% Similarity=-0.791 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~y~~~~~lR~~~Pv~~~~~~w~vt~~~~v~~vl~d~~~f~s~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~~~R 80 (366)
T d1io7a_ 1 MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELR 80 (366)
T ss_dssp CHHHHHHHHHHCSEEECSSCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHHHHHH
T ss_pred CCHHHHHHHHCCCEEEECCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
T ss_conf 90899999835998873998999689999999659400336764555554433355432235555550117857888987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~f~~~~l~~~~~~i~~~a~~ll~~~~~~~~D~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (366)
T d1io7a_ 81 SMSADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLVAFRLGKPGE 160 (366)
T ss_dssp GGGTTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGCTTSCCCTTC
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 76145565130677888899999999873135563210000000122011001687345799999999999764030146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~~l~ 240 (366)
T d1io7a_ 161 IFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENLY 240 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 78888889887665420222045665542014589999999999999714420377999999874313322233442001
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~ee~~r~~~~~~~~~R~~~~d~~i~g~~ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G~r~C~G~ 320 (366)
T d1io7a_ 241 LKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGA 320 (366)
T ss_dssp HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCSCCCCTTCCGGGSCTTH
T ss_pred HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 00046553000234300010210024333436789777332010025611258665418898999988788986488369
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~lA~~e~~~~l~~ll~rf~~~~~~~~~~~~~~~~~~~~~lpVrl~~ 366 (366)
T d1io7a_ 321 PLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNGYKRLVVRLKS 366 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEEECCCSSBCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 9999999999999999779882089865787764787554799969
|
| >d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=0 Score=27565.11 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~w~d~~r~i~v~aNi~~~~d~~~a~~~GAdGIGL~RtEflfl~~~~~p~~~e~i~~~~~~~~~~~l~ 80 (366)
T d1h6za1 1 RSPDLKGSFQTILQWCQEMKRLGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGSRINFIREMILADSASGRKAALD 80 (366)
T ss_dssp CCSCSTTHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHTTTCCSEEECBCSGGGSTTTHHHHHHHHHSCSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
T ss_conf 98987458999999875378669997089999999999759984503887998618987882898763235577999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 k~~~~~~~~y~~i~~a~~~~pV~iRtlD~g~dk~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~E~NP~LG~RGiR~~L~ 160 (366)
T d1h6za1 81 KLLPIQRADFVGILRAMRGLPVTIRLLDPPLHEFVPHDAAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGIT 160 (366)
T ss_dssp HHHHHHHHHHHHHHTTTSSSCEEEECCCSCGGGGCCSSCSSTTTTSCSSSCCHHHHHHHHHSSCCSSSTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCC
T ss_conf 87788999999999970899879996224322357850555543111003543555532025557884123456655414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~p~lf~~QlrAilrA~~~~~~~g~~~~l~iMiP~v~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iG~MiEvPsaal~~ 240 (366)
T d1h6za1 161 YPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTA 240 (366)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH
T ss_conf 80667999999999999987528865401221206679999989999989999887504876441367641213899869
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 d~~a~~vDF~SIGTNDLtQy~la~dR~n~~v~~~~~~~~~~~~~~p~~~~~~~av~~lI~~a~~~~r~~~~~i~vsiCGE 320 (366)
T d1h6za1 241 DSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 320 (366)
T ss_dssp HHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHHHHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99863050899601046567765301551134567765200010556606699999999999998775189981997064
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~a~dp~~~~~Li~lGi~~lSvsp~~ip~vk~a~a~~~~~~~r~~~~ 366 (366)
T d1h6za1 321 HGGDPATIGFCHKVGLDYVSCSPFRVPVAIVAAAHASIKDRRAAMK 366 (366)
T ss_dssp GGGCHHHHHHHHHHTCSEEEECGGGHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 0239999999998699979989277699999999854998787459
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=100.00 E-value=0 Score=27564.30 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 t~~lvd~~At~~t~~L~~~L~~~~g~~il~Gqq~~~~~g~~~~~~~~~~~~v~~~tG~yPAv~G~D~~~~~~~~~~~~~~ 80 (366)
T d2bvya2 1 TIAIVDADATAETRSLLSYLDGVRGEGILFGHQHTTSFGLTTGPTDGTTSDVKNVTGDFPAVFGWDTLIIEGNERPGLAE 80 (366)
T ss_dssp CBCCSSTTCCHHHHHHHHHHHHHTTTCEEEEEETTTTSCSSSCSCCSSCCHHHHHHSSCBSEEEEETTTTTTSSTTCCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 96665888799999999999985489879986146444666687426799999976888776443114567874433223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~ 160 (366)
T d2bvya2 81 NTRDENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGT 160 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 67311489999999976306997899971377888986557741689873689970689999999999999998750478
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~VPVl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG 240 (366)
T d2bvya2 161 LIPIVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLG 240 (366)
T ss_dssp BCCEEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEEC
T ss_pred CCCEEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEE
T ss_conf 86089831220379855057889998999999999999999725876169986168778865211665288987478988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~D~Y~~~~~~~~~~~~~~~l~~~~~~a~~~~Kp~altE~G~~~~~~~~~~~~~~W~~~~l~~i~~~~~~~~~~y~~~W~n 320 (366)
T d2bvya2 241 LDTYDSTGSDAFLAGLVADLRMIAEIADEKGKVSAFTEFGVSGGVGTNGSSPAQWFTKVLAAIKADPVASRNAYMETWAN 320 (366)
T ss_dssp CEEEESSCCHHHHHHHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCCTTHHHHHHHHHHHSTTTTCCSEEEECCC
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 74457888752278999999999999873699579942002578644678742589999999873721001048988548
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~p~~g~~s~~dF~~~~~dp~~~f~~~l~~~y~~~~~~~~ 366 (366)
T d2bvya2 321 FDAGQHFVPVPGDALLEDFQAYAADPFTLFASEVTGAFDRTVAAAP 366 (366)
T ss_dssp CSSSSCSSCCTTCTTHHHHHHHHHSTTEEBGGGCCSTTCCCCCBCC
T ss_pred CCCCCCCEECCCCCCHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCC
T ss_conf 9988761236997469999999759566542227032147666797
|
| >d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27563.52 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~f~~P~~~~~G~gal~~l~~~l~~~g~r~lvvtd~~~~~~~~~~l~~~L~~~~i~~~~~~~~~~p~~~~v~~~~~~ 80 (366)
T d1jq5a_ 1 AAERVFISPAKYVQGKNVITKIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANI 80 (366)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHTTTCSEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHH
T ss_pred CCCCEEECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf 99858958963999039999999999974994899989857899999999999877996999981899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~D~IiavGGGs~iD~aK~iA~~~~~p~i~IPTT~gtgse~t~~avi~~~~~~~~~~~~~~~~P~~vi~Dp~l~~t 160 (366)
T d1jq5a_ 81 ARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAASTDAPTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIAN 160 (366)
T ss_dssp HHHTTCSEEEEEESHHHHHHHHHHHHHHTCEEEEEESSCCSSCTTCSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHT
T ss_pred HHCCCCCEEEEECCCCCCCCHHEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHH
T ss_conf 62038868998168864422000120466535402434434320013212323567422110114557789998610432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 lP~~~~~sg~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (366)
T d1jq5a_ 161 APPRLLASGIADALATWVEARSVIKSGGKTMAGGIPTIAAEAIAEKCEQTLFKYGKLAYESVKAKVVTPALEAVVEANTL 240 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 32788898677788899999998860654323034479999999999999987468876667635658999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~g~~~~~~~~~~~H~i~h~l~~~~g~~~~~~HG~~va~g~~~~~~l~~~~~~~~~~~~~l~~~lglP~~L~dlgi~~~~ 320 (366)
T d1jq5a_ 241 LSGLGFESGGLAAAHAIHNGFTALEGEIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKLKDAS 320 (366)
T ss_dssp HHHHHHHHHCCCHHHHHHHHGGGSCSGGGGSCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCCCSTTTTTCTTCC
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCC
T ss_conf 60433467876645211012676237764767633779999999998428899999999999986999999994989777
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~l~~ia~~a~~~~~~~~nP~~~t~edi~~il~~a~~~~~~~~~~ 366 (366)
T d1jq5a_ 321 REDILKVAKAATAEGETIHNAFNVTADDVADAIFAADQYAKAYKEK 366 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGGTCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999840874147999999999999999999999987209
|
| >d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Heme-dependent catalase-like superfamily: Heme-dependent catalase-like family: Allene oxide synthase domain: Allene oxide synthase-lipoxygenase protein, N-terminal domain species: Black sea rod (Plexaura homomalla) [TaxId: 47982]
Probab=100.00 E-value=0 Score=27562.31 Aligned_cols=1 Identities=100% Similarity=0.036 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
=
T Consensus 1 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~HakG~ga~G~f~v~~d 80 (366)
T d1u5ua_ 1 WKNFGFEIFGEKYGQEELEKRIKDEHTPPPDSPVFGGLKLKLKKEKFKTLFTLGTTLKGFRRATHTVGTGGIGEITIVND 80 (366)
T ss_dssp CCCCHHHHHHHHHCHHHHHHHHHHHTSCCCCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTSCSSSCSEEEEEEEEEECSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 97620778877632577664000457899874223475431189999999865411468756654775645999998079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~f~~G~~~Pv~vRfS~~~G~~D~~~d~RG~AiKf~~~~ge~~~D~v~~n~pvF~~rd~~~F~~~~~a~k~~p~ 160 (366)
T d1u5ua_ 81 PKFPEHEFFTAGRTFPARLRHANLKYPDDAGADARSFSIKFADSDSDGPLDIVMNTGEANIFWNSPSLEDFVPVEEGDAA 160 (366)
T ss_dssp CCSCCCSSSCTTCEEEEEEEEEBSSCSCTTSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCSHHHHHHHTTCCTTHHH
T ss_pred CHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 01655876179975679999258888865567877369987658987325786337774304798886888860587637
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~f~~~~Pe~~~~~~~~~r~~P~s~~~~~y~s~~tf~fvn~~G~~~yvK~~~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (366)
T d1u5ua_ 161 EEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIWIFS 240 (366)
T ss_dssp HHHHTTCHHHHHHHHHHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGCTTCCCHHHHTTTTCCS
T ss_pred HHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHCCCHHHHHHHCCC
T ss_conf 89987098999999985577999834475002261787847898899999998457776642444323722344321246
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~d~Lr~dl~~~l~~g~~~~~l~vQl~~~~d~d~~~i~D~Tk~Wpe~~~P~~~vG~ltl~~~~~~~e~EqlaF 320 (366)
T d1u5ua_ 241 RHENEKRPDDYLRKEYVERLQKGPVNYRLQIQIHEASPDDTATIFHAGILWDKETHPWFDLAKVSIKTPLSPDVLEKTAF 320 (366)
T ss_dssp CCTTCCSCTTHHHHHHHHHHHHSCEEEEEEEEEEECCTTCCGGGGCTTSCCCTTTSCCEEEEEEEEEEECCHHHHHHCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCC
T ss_conf 54102576377899999998679954999999546354789998887516886567637879999799897057576524
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~P~~~~pgi~~~~~~~~~d~~si~~~R~~vY~~s~~~R~~~~~~~~ 366 (366)
T d1u5ua_ 321 NIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQHLRKLKIGSLV 366 (366)
T ss_dssp CTTCCCTTSCCCCCSSSSSTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8755699837778522243442888999999999998754501569
|
| >d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SelA-like domain: Hypothetical protein MJ0158 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=100.00 E-value=0 Score=27560.73 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~r~~~~~~~~~~~i~~~g~~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a 80 (366)
T d2aeua1 1 LRLEKARKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSA 80 (366)
T ss_dssp CCCCHHHHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHTSTTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CCHHHHHHHHHHHHCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
T ss_conf 96366788899985633330275432688888864889999998438245689999999987068984479996889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~~d~e~l~~~i~~~tk~i~~~~p~n~~~~~~~~l~~i~~ia 160 (366)
T d2aeua1 81 ILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTA 160 (366)
T ss_dssp HHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 99999983899979994699862419988976288677799999999736877607999945888867879999999874
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~ 240 (366)
T d2aeua1 161 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIY 240 (366)
T ss_dssp HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 00817899956721432364468987662861787136444545521589706778999999972235568779899888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV 320 (366)
T d2aeua1 241 RALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGI 320 (366)
T ss_dssp HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHCCE
T ss_conf 89986049999999999999999988604111133566667543457630110477760102456879999999981988
Q ss_pred ---------------------------------------------C
Q ss_conf ---------------------------------------------8
Q 001738 683 ---------------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK~~~~~ 366 (366)
T d2aeua1 321 ITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFKS 366 (366)
T ss_dssp ECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf 9997898889998799951655411089999999999999998459
|
| >d1fn9a_ d.196.1.1 (A:) Outer capsid protein sigma 3 {Reovirus [TaxId: 10891]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Outer capsid protein sigma 3 superfamily: Outer capsid protein sigma 3 family: Outer capsid protein sigma 3 domain: Outer capsid protein sigma 3 species: Reovirus [TaxId: 10891]
Probab=100.00 E-value=0 Score=27496.60 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 MEVRlPNfHSvVE~I~nSYe~rp~~yst~egWd~~~f~~PDVIkVG~AYCCaQCCGVLGapp~~~~~FPHHrCHQq~~R~ 80 (365)
T d1fn9a_ 1 MEVCLPNGHQVVDLINNAFEGRVSIYSAQEGWDKTISAQPDMMVCGGAVVCMHCLGVVGSLQRKLKHLPHHRCNQQIRHQ 80 (365)
T ss_dssp CCCCCCCHHHHHHHHHHHTTTCCCEEBTTTBTCCSSCCCCSEEEETTEEEETTTTEEEEEGGGTCCSCCCCCCCCCCCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 96446771149999998874577644520131454314876599867587400154336786678607613676776404
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 dtPLLrfvgRvTaH~KRgmLd~~a~~~~~i~D~~~e~~~rv~~egg~lvE~~~~~lD~~s~~~SI~sdWT~PLe~~~dlD 160 (365)
T d1fn9a_ 81 DYVDVQFADRVTAHWKRGMLSFVAQMHEMMNDVSPDDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLD 160 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCCEEEECCGGGSSTTSTTTCTTCCTTSCCCCCTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHCCCCCC
T ss_conf 75577655578887765279999999999873077776676636886331333421606653334304677201014420
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 tr~D~~~tal~~MIDsSdl~pnf~mrdpshafngvkl~gdarqt~fsrtf~~rsslewgvmvydysele~dp~kgr~yr~ 240 (365)
T d1fn9a_ 161 TKLDQYWTALNLMIDSSDLIPNFMMRDPSHAFNGVKLGGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGRAYRK 240 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTCEESSEESCTHHHHTTSCBCGGGGGCCCCSSCCTTSCCCCCCEEECCHHHHHCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCHHHH
T ss_conf 35789999888600165305332415833322662005740002000025776631444799765663368544502355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 elvtpardfghfglshysrattp~lgkmpavfsgmltgnckmyp~i~gtak~kt~~kl~~avn~~wgvekirya~gpgg~ 320 (365)
T d1fn9a_ 241 ELVTPARDFGHFGLSHYSRATTPILGKMPAVFSGMLTGNCKMYPFIKGTAKLKTVRKLVEAVNHAWGVEKIRYALGPGGM 320 (365)
T ss_dssp HHTSTHHHHCCGGGCCCCEEECCCSTTCCEEECCGGGTSCCEEECCCHHHHHGGGHHHHHHHHHHSCHHHHHHHHCTTHH
T ss_pred HHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
T ss_conf 53673021364441000223671002562565310147621431023620024378899987745403420221168863
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 tgwy~rtmqqapivltpa~ltmfpdt~kfgd~~~pvmigdpmi~g 365 (365)
T d1fn9a_ 321 TGWYNRTMQQAPIVLTPAALTMFPDTIKFGDLNYPVMIGDPMILG 365 (365)
T ss_dssp HHHHHHHHHHHHHHTSCGGGGCCCSSCSSCSSSSCEEECCCEEEC
T ss_pred CHHHHHHHHHCCEEECHHHHCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 324443453088673468850277742135667863317864369
|
| >d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27493.66 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 Mns~G~~~r~tt~GESHG~~ig~vIdG~PaGl~i~~e~I~~~L~RR~pG~~~~~t~R~E~D~veilSGv~~G~TtG~PI~ 80 (365)
T d1um0a_ 1 MNTLGRFLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIG 80 (365)
T ss_dssp CCEECSSSEEEECCSCCSSEEEEEEECCCBTCBCCHHHHHHHHHHHTTCCSSCCCHHHHSCEEEECSSEETTEECSSCEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECEECCEECCCCCE
T ss_conf 98764422788515578884489992408688858999999986679999998766899982799027368826577405
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~~~v~~IG~i 160 (365)
T d1um0a_ 81 FLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGGGRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGGI 160 (365)
T ss_dssp EEEECCCSCCCCCCCCTTBCCTTSTHHHHHHHHCCCCCCCTTCSTHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEETTE
T ss_pred EEECCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
T ss_conf 55414656751456664257777761111100785367888618899999999999999988875471589999944544
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gv~~~~g~P~GlG~P~f~kLda~LA~A~mSI 240 (365)
T d1um0a_ 161 KAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYAKLDAKIAEAMMGL 240 (365)
T ss_dssp ECSSCCHHHHHHSTTCBSCHHHHHHHHHHHHHHHHTTCCBCEEEEEEEEESSTTCCCCSCCSBTTTBCHHHHHHHHHHTS
T ss_pred CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 45431011202444036872667888999999985188768668999855643444786557876421236999877425
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 pAvKgVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~aGGi~GGiSnG~pI~~rva~KP~sSI~~pq~Tvd~~~~e~~~~~~ 320 (365)
T d1um0a_ 241 NGVKAVEIGKGVESSLLKGSEYNDLMDQKGFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLK 320 (365)
T ss_dssp TTEEEEEETTGGGGGGSBHHHHCCCEETTEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCEEEEBTTSCEEEECCC
T ss_pred CCEEEEEECCCHHHHHCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEEEEEC
T ss_conf 33235641454666652576506732478874567785105767887669999957875567755435779987776016
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 gRhDpCivprA~~V~EAm~alvlaD~~L~~~~~~~~~~k~~~~~~ 365 (365)
T d1um0a_ 321 GRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN 365 (365)
T ss_dssp SCCCSCTHHHHHHHHHHHHHHHHHHHHHHGGGSBHHHHHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 988970726528999999999999999997563599999874179
|
| >d2pnwa1 b.52.1.4 (A:5-369) Membrane-bound lytic murein transglycosylase A, MLTA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double psi beta-barrel superfamily: Barwin-like endoglucanases family: MLTA-like domain: Membrane-bound lytic murein transglycosylase A, MLTA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=27493.15 Aligned_cols=1 Identities=0% Similarity=-1.589 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 f~l~pvsf~~LPGW~~Dd~~~al~Af~~SC~~l~~~~~~~~~~~~~t~~~~~~~c~~a~~~~~~~~~~aR~Ffe~~F~py 80 (365)
T d2pnwa1 1 FSIDEVSFRDLPGWGQDDPRKLFPAMATILSHLRNAKPYRTGALGITAAELVSLLELAERGQVNSPEQARQFFETNSVPF 80 (365)
T ss_dssp CEEEECCGGGSTTGGGCCCTTHHHHHHHHHHHHTSSCCCCCCTTCCCHHHHHHHHHHHHHCCCCSHHHHHHHHHHHEEEE
T ss_pred CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEEE
T ss_conf 96337188778894112499999999999998721785545666778999999999998535699899999999718899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~~~~~~~Gl~TGYYEP~l~gS~~~~~~y~~PlY~~P~dLv~vdl~~f~~~l~~~~~~gR~~~~~~~py~~R~~I~~g~ 160 (365)
T d2pnwa1 81 RISPAQGKSGFVTAFYEPELEVSATPDDVWRYPIYRRPPELVDIDNDNRPDGFDPSYAFGKADEEGISYFPDRRAIDEGC 160 (365)
T ss_dssp EEEC----CEEEEEEEECEEEEESSCCSSSCEEEEBCCTTEEECCTTTCCTTCCTTCCEEEEETTEEECCCCHHHHHTTT
T ss_pred EECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCC
T ss_conf 94048987536898667767000378988987744689531006622255434665302443168766777445554465
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~~g~elaw~~d~vd~fflqIQGSgrv~l~dG~~~rv~yag~NG~pY~sigr~Li~~G~i~~~~~sm~~ir~wl~~nP~ 240 (365)
T d2pnwa1 161 LRGRGLEIAWARSKVDLFFVHVQGAARLVFPDGAIKRITYAAKAGHVFSPIGRLLLDRGELDPKTISMQTIRQWLADHPD 240 (365)
T ss_dssp TTTSSCEEEEESCHHHHHHHHHHTEEEEECTTSCEEEEEEEEECSCCCCCHHHHHHHTTCSCTTTCCHHHHHHHHHHCGG
T ss_pred CCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHHCHH
T ss_conf 46778623673685777886303617999089998999871678986505679998768878210799999999997969
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~ll~~N~syvFFr~~~~~~~~~Gp~Ga~gvpLtp~rSiAvD~~~~plG~p~~l~~~~~~~~~~~~~~~rl~~aqDTG 320 (365)
T d2pnwa1 241 EVDGVLWHNRSYIFFREADVAGLDMGPIAAAKVPLVAGRALAVDRLIHTFGLPFFIHAPTLTHLDDGKPFARLMLALDTG 320 (365)
T ss_dssp GHHHHHTTCCCCEEEEEC-------CCBCTTSSBCCTTTEEECCTTTCCTTCEEEEEETTCCTTTTTSCEEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 99999860997599887788776789756137120125035405542578865999656777689987100669997446
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 gAIkG~~R~D~f~G~G~~A~~~Ag~~~~~g~~~~Llpk~~~~r~~ 365 (365)
T d2pnwa1 321 SAIVGPARGDIFTGSGFEAGELAGTVRNEADFYILLPRIAAERYR 365 (365)
T ss_dssp TTCCSTTEEEEEEEESHHHHHHHHTCEEEEEEEEEEEHHHHGGGC
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEEECCHHHHCC
T ss_conf 523689726997408889998860768744799998734354439
|
| >d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Pyruvate dehydrogenase E1-alpha, PdhA species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=0 Score=27493.38 Aligned_cols=1 Identities=0% Similarity=-0.061 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~p~ls~e~l~~~yr~M~l~R~~e~~~~~l~~qG~ig~~h~~~GqEa 80 (365)
T d1w85a_ 1 TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEA 80 (365)
T ss_dssp CCCCCHHHHHHHHHHTCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHH
T ss_pred CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 98797433321022139769999999999885457999999999999999999999999999997799656008898699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~vg~~~~l~~~D~i~~~yR~hg~~la~G~~~~~~~~~~~G~~~g~~~~~~~~~~~~~~ivG~~~p~AvG~A~a~k~~~~ 160 (365)
T d1w85a_ 81 SQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGK 160 (365)
T ss_dssp HHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHHHHHHHHHTCGGGGCCCTTCCBCCCCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCEEEECCCCHHEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 99999986797687631366112255569999999986279988667888755605533357666412567765643046
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~EalN~A~~~~lPvlfv~eNN~~aist~~~~~~~~~~~~~r~~~~Gi~~~~vDG~D~~~v~~ 240 (365)
T d1w85a_ 161 KAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYA 240 (365)
T ss_dssp SCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHH
T ss_conf 88146631677643126888887764336674379997024333322202133211111012357617981440687999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~~~A~~~~R~g~gP~lie~~tyR~~gHs~~dd~~~~YR~~eEi~~w~~~DPI~~~~~~L~~~g~~~~~el~~i~~e~~~ 320 (365)
T d1w85a_ 241 AVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKE 320 (365)
T ss_dssp HHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99999997423796179974134356667868863124774789998848989999999998799999999999999999
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 eV~~A~~~A~~sP~P~~~~l~~~Vy~e~p~~l~eq~~~~~~~~~~ 365 (365)
T d1w85a_ 321 EIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK 365 (365)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHTSCSSCCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999999999868998989998453238998899999999887469
|
| >d1u1ha2 c.1.22.2 (A:396-760) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Cobalamin-independent methionine synthase domain: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27490.42 Aligned_cols=1 Identities=0% Similarity=-0.426 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~lpTT~VGS~PRp~eLk~a~e~~~~G~is~eel~~~~~~ai~~~v 80 (365)
T d1u1ha2 1 EGVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVV 80 (365)
T ss_dssp THHHHHTTTTSSCCCSSSCCHHHHHHHHHHHSCCCSSCBBCCSBCCCCSCCC-------------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 96899988089865267983789999999847999986232477889989999999976699999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~Q~~aGidiItDGE~~r~d~~~~f~~~l~G~~~~~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~~~~~~k 160 (365)
T d1u1ha2 81 DLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMK 160 (365)
T ss_dssp HHHHTTCCSBBCCBCTTCSCTTHHHHTTSTTEECCSSCCEEEETTEEECCCEECSCCCCCSCSSHHHHHHHTTSCSSCBE
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 99998479967639813035999999752670000464157469711066041475446676408999998850122234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~i~gp~~l~~~~~~~~y~~~~e~~~dLa~ay~~el~~L~~aG~~~IQiDEP~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 240 (365)
T d1u1ha2 161 GMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN 240 (365)
T ss_dssp EEEECHHHHHHTSEECSSSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTTTTTCCSSGGGHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45550368853126668899899999999999999999996699389957628764321242159999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~v~~~~~~g~~~~~~~~l~~l~vd~l~le~~~~~~~~l~~~~~~~p~~K~l~~GVVd~r~~~~E~~e~v~~ri 320 (365)
T d1u1ha2 241 CGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRV 320 (365)
T ss_dssp TTSCTTSEEEEEESCSCCTTTHHHHHTTCCSEEEECCSSSCGGGGGGTSSSSCCCSEEEECCSCTTSSSCCCHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 43566655899732655412478885477420001103586278887775288998899888827999879999999999
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~a~~~v~~erl~lspdCGf~~l~~~~a~~KL~~lv~~a~~vr~e 365 (365)
T d1u1ha2 321 NKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIRSQ 365 (365)
T ss_dssp HHHHTTSCTTTBCBCCSSCCTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999973885539981888999799899999999999999999659
|
| >d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RPA4359-like domain: Hypothetical protein RPA4359 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=100.00 E-value=0 Score=27489.32 Aligned_cols=1 Identities=0% Similarity=-1.556 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~L~~~i~~~i~~~G~i~f~~fM~~~LY~p~~GYY~~~~~iG~~GDF~Tsp~is~~Fg~~ia~~~~~~~~~~~~~~~ 80 (365)
T d1zkda1 1 IDQTALATEIKRLIKAAGPMPVWRYMELCLGHPEHGYYVTRDPLGREGDFTTSPEISQMFGELLGLWSASVWKAADEPQT 80 (365)
T ss_dssp CCSSHHHHHHHHHHHHHCSEEHHHHHHHHHHCTTTCTTTCC--------CCSHHHHCHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 97207899999999956985599999997079986344789978899886788734799999999999999997177766
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~l~~~~~i~w~~~~~~~~~~~g~iiaNE~fDA 160 (365)
T d1zkda1 81 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEGPAVILANEYFDV 160 (365)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSCCSSEEEEEESSGGG
T ss_pred CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEECCCHHHCCCCCEEEEECCCCCC
T ss_conf 16995188611788866554123311355405898435456778898874166540111474243558759993255755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 lPv~~~~~~~~~~~E~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~G~~l~i 240 (365)
T d1zkda1 161 LPIHQAIKRETGWHERVIEIGASGELVFGVAADPIPGFEALLPPLARLSPPGAVFEWRPDTEILKIASRVRDQGGAALII 240 (365)
T ss_dssp SCCEEEEEETTEEEEEEEEECTTSCEEEEECSSCCTTCGGGSCGGGGGCCTTCEEEECCSHHHHHHHHHHHHHCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 00128997475421322232255204776310212467763033443147886323565899998765666405653433
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 DYG~~~~~~~~~l~~~~~h~~~d~l~~pG~~DIT~~VnFs~L~~~~~~~g~~~~~~~tQ~~FL~~~GI~~~~~~l~~~~~ 320 (365)
T d1zkda1 241 DYGHLRSDVGDTFQAIASHSYADPLQHPGRADLTAHVDFDALGRAAESIGARAHGPVTQGAFLKRLGIETRALSLMAKAT 320 (365)
T ss_dssp EEEESSCCBCCCCEEECSSSEECTTSSTTSSEEECCEEHHHHHHHHHHTTCEEEEEEEHHHHHHHTTHHHHHHHHHHTSC
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 10045554444203344443366213898753265118899999987458615234358999997889999999975399
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~Li~p~~~~MGe~FKVl~~~~~~~~~~~gf~~~ 365 (365)
T d1zkda1 321 PQVSEDIAGALQRLTGEGRGAMGSMFKVIGVSDPKIETLVALSDD 365 (365)
T ss_dssp HHHHHHHHHHHHHHHCEETTEETTTEEEEEEECTTCCCCTTTTCC
T ss_pred HHHHHHHHHHHHHHCCCCCHHCCHHEEEEEEECCCCCCCCCCCCC
T ss_conf 889999999999726988100211279999817999988898999
|
| >d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=100.00 E-value=0 Score=27491.84 Aligned_cols=1 Identities=200% Similarity=1.865 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~k~~r~~l~fdDVllvP~~st~~s~~vdl~~~it~~~~~~iPIIsA~MDtV~~~~mA~~ls~~Gglgvlhr~~~~~ 80 (365)
T d1zfja1 1 SNWDTKFLKKGYTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSIT 80 (365)
T ss_dssp CGGGGSSCCCCCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHH
T ss_pred CCCCHHHHHCCCCCCEEEEECCCCCCCHHHCEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCHH
T ss_conf 97211223026880108985787776776726237964895268988978988768889999999779916974866789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 e~~~~~~~~~~~~~~~~v~aavGv~~~~~er~~~l~~agvd~ivID~A~G~s~~~~~~i~~ik~~~~~~~iIaGNV~T~e 160 (365)
T d1zfja1 81 EQAEEVRKVKRSEGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAE 160 (365)
T ss_dssp HHHHHHHHHHHHTSCBCCEEEECSSTTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHH
T ss_conf 98877665443037569999944681277899999986998899978865543214788999865887644411343489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~a~~L~~aGaD~VkVGiG~Gs~CTTr~~tGvGvPq~sai~~~~~~~~~~~~~iIADGGi~~~GDi~KAla~GAd~VMlG~ 240 (365)
T d1zfja1 161 GARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGS 240 (365)
T ss_dssp HHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf 99999866976378640256445676301342242138999999997579569805884762066655321587898642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~lAg~~EsPG~~~~~~g~~~k~~~Gm~s~~a~~~~~~~r~~~~~~~~~~~~~~eG~~~~v~~~G~~~~~~~~l~gglrs~ 320 (365)
T d1zfja1 241 MFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSG 320 (365)
T ss_dssp TTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 21046678974797778475552775557555456644434455443221224684478546787789999999999998
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 m~y~G~~~l~e~~~~~~fv~vt~~~~~E~~~h~~~~~~~~~~y~~ 365 (365)
T d1zfja1 321 MGYVGAGDIQELHENAQFVEMSGAGLIESHPHDVQITNEAPNYSV 365 (365)
T ss_dssp HHHTTCSSHHHHHHHCCEEECCHHHHHHHSCCSSCCSSCBTTBC-
T ss_pred HHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 762487749999629889999922010258862577157899869
|
| >d3c8ya1 c.96.1.1 (A:210-574) Fe-only hydrogenase, catalytic domain {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Fe-only hydrogenase superfamily: Fe-only hydrogenase family: Fe-only hydrogenase domain: Fe-only hydrogenase, catalytic domain species: Clostridium pasteurianum [TaxId: 1501]
Probab=100.00 E-value=0 Score=27487.80 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~i~~v~~~l~~~~k~vV~siaP~~r~sla~~f~l~~~~~~~~kl~~~lk~LGF~~V~dt~~gad~~~~e~~~E~~~r~~~ 80 (365)
T d3c8ya1 1 HMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIEN 80 (365)
T ss_dssp CHHHHHHHHHCTTCEEEEEECGGGGGTGGGGGTCCSSCCCHHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97899999968995899998927899999984899430028999999998699999983788899999999999999865
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~P~isS~CPg~V~yiEk~~PeLip~ls~v~SP~~~~g~liK~~~~~~~~~~~~~i~~V~I~PC~aKK~Ea~r~e~~~ 160 (365)
T d3c8ya1 81 NGPFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFEADRPQMEK 160 (365)
T ss_dssp TCSCCEECCCCHHHHHHHHHHCGGGGGGBCCBCCHHHHHHHHHTTHHHHTTCCCGGGEEEEEEESCSHHHHHHTCTTSEE
T ss_pred CCCCCEEEECCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
T ss_conf 89987598479899999999675653325678888999999999987876099911289999834643224542821245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~dVD~VLT~~El~~~l~~~~i~~~~l~~~~~~~~~~~~s~~g~~~~~sGG~~~~~~~~~~~~~~~~~~~~~~~~~~r 240 (365)
T d3c8ya1 161 DGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVR 240 (365)
T ss_dssp TTEESCSEEEEHHHHHHHHHHTTCCGGGCCCCCCCGGGTCCCHHHHTTTSTTHHHHHHHHHHHHHHHTCCCSCCCCGGGC
T ss_pred CCCCCCCEEEEHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECC
T ss_conf 78987488953999999999759992238886668766777866512123663999999998774368865552024306
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~~~i~~~~~~~~~~~~~~~~v~G~~n~~~~l~~~k~~~~~~~fvEvmACpgGCinGgGq~~~~~~~~~~~~~~~~r~~~ 320 (365)
T d3c8ya1 241 GLNGIKEAEVEINNNKYNVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASV 320 (365)
T ss_dssp SSCSEEEEEEEETTEEEEEEEEESHHHHHHHHHTSGGGSSCCCEEEEESSTTSGGGCTTSCCCCHHHHHHSCHHHHHHHH
T ss_pred CCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 87751899997089178999960299999999987459999728998068998707998688896013268999999998
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 l~~~d~~~~~r~~~en~~~~~ly~~~l~~p~~~~~~~lLHT~y~~ 365 (365)
T d3c8ya1 321 LYNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKYKK 365 (365)
T ss_dssp HHHHHHHCSCCSGGGCHHHHHHHHHTTCSTTSHHHHHHSBCCCCC
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
T ss_conf 875430377788855999999999986799838999972687029
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=100.00 E-value=0 Score=27484.93 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~ 80 (365)
T d1jofa_ 1 PLHHLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp CEEEEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEEEC
T ss_conf 91199999314999899999858889389845445168999777999489899999938947899990899769876412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~ 160 (365)
T d1jofa_ 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred CCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 89986789987899879999932799789986745788742068664033004764675568898115978889999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T d1jofa_ 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EEECCCCEEEEEECCCCCCEEECCCEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCC
T ss_conf 82079987999970688716652511112788740899988998669995158998999995598753778731240245
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~ 320 (365)
T d1jofa_ 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCC
T ss_conf 56556665444435776316998999978997135787542279999856887144676766777679986478964899
Q ss_pred --------------------------------------------C
Q ss_conf --------------------------------------------8
Q 001738 683 --------------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------------~ 683 (1019)
.
T Consensus 321 G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~vp~p~~~~~~~w~~ 365 (365)
T d1jofa_ 321 DEWMAITDDQEGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIWYD 365 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETTEEEEEEEEECCSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEECC
T ss_conf 999999967999499999828867278999889999976879639
|
| >d1t64a_ c.42.1.2 (A:) Histone deacetylase 8, HDAC8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Arginase/deacetylase superfamily: Arginase/deacetylase family: Histone deacetylase, HDAC domain: Histone deacetylase 8, HDAC8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27414.02 Aligned_cols=1 Identities=100% Similarity=0.437 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~pvyiy~~~~~~~~~~hP~~P~R~~~~~~ll~~~gl~~~~~~v~p~~At~~el~~vHs~~Yi~~l~~~~~~~~~~~~~~ 80 (364)
T d1t64a_ 1 LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDS 80 (364)
T ss_dssp CCCEEECCHHHHHHHTCSSSSCCHHHHHHHHHHHTTGGGGSEEECCCCCCHHHHTTTSCHHHHHHHHHHHHHCSSCCTTT
T ss_pred CCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
T ss_conf 98869969888416799898829999999999974996688896889799899998299999999998604026444112
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~l~~d~p~~~~~~~~~~~~aG~~l~A~~~~~~g~~~~a~~~~gg~HHA~~~~a~GFC~~NdvaiA~~~~~~~~~RV~ 160 (364)
T d1t64a_ 81 IEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERIL 160 (364)
T ss_dssp TTTTCBTTBCCCTTHHHHHHHHHHHHHHHHHHHHTTSCSEEEETTCCCTTCBTTBCBTTBSSCHHHHHHHHHTTTCSCEE
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEE
T ss_conf 01067888887703999999985028999999875986500345754464333444454555689999999985103079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 iiD~DvHhGnGtq~iF~~d~~V~~~SiH~~~~~~~Pgtg~~~e~G~g~g~~~~~NvPL~~g~~d~~y~~~~~~~i~~~~~ 240 (364)
T d1t64a_ 161 YVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQ 240 (364)
T ss_dssp EEECSSSCCHHHHHHHTTCSSEEEEEEEECCTTCTTCCCCTTCCCCGGGTTCEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 98523577776044420687544533345567778898873105876445632334125565738999999976678862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~f~Pd~IvvsaG~D~~~~Dplg~~~lt~~g~~~~~~~l~~~~~p~~~~~~GGY~~~~~ar~w~~~~~~l~g~~~~~~~P~ 320 (364)
T d1t64a_ 241 AFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 320 (364)
T ss_dssp HHCCSEEEEECCSTTBTTCTTCCCCBCHHHHHHHHHHHHTTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTCCCCSBCCC
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 57998899989714778997778727998999999999835998799979888878999999999999859988866898
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~p~~~~~~~~~~~~~~n~~~~~~~i~~~i~~~l~~~~ 364 (364)
T d1t64a_ 321 HEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 364 (364)
T ss_dssp CTTGGGGTTTCBSCCCCCSCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 50155409973136686656566999999999999999987429
|
| >d2jera1 d.126.1.6 (A:2-365) Agmatine iminohydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Porphyromonas-type peptidylarginine deiminase domain: Agmatine iminohydrolase species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=0 Score=27413.62 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~tP~~~g~rmPaEwep~~~~~l~wP~~~~~w~~~~~~~~~~~~~i~~~ia~~e~V~v~~~~~~~~~~~~~~~~~ 80 (364)
T d2jera1 1 AKRIVGSTPKQDGFRMPGEFEPQEKVWMIWPERPDNWRDGGKPVQEAFTNVAKAISQFTPMNVVVSQQQFQNCRRQLPPE 80 (364)
T ss_dssp CCBCCSCCHHHHTCBCCCTTSCEEEEEEECCCCTTTSGGGGHHHHHHHHHHHHHHHTTSCEEEEECTTTHHHHHHHSCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCC
T ss_conf 98456899111387748995500328997689985204677999999999999985887399997928999999757566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 v~~~~~~~dD~W~RD~GPi~v~~~~g~~~~vdf~FN~wG~k~~~~~~~~~~D~~~~~~ia~~~~~~~~~~~~lvlEGG~i 160 (364)
T d2jera1 81 ITVYEMSNNDAWVRDCGPSFVINDHGEIRGVDWTFNAWGGLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSF 160 (364)
T ss_dssp SEEEECCCSSSCHHHHSCEEEECTTSCEEEEEEECCTTTHHHHCSSSCCTTGGGHHHHHHHHHTCCEEEEEEEECCGGGE
T ss_pred EEEEECCCCCHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCE
T ss_conf 49999368875764551389991677567633664687655555555410278999999998366544665737748966
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~dG~GtlltTe~~ll~~nRNp~ls~~~ie~~Lk~~LGv~~viwl~~gl~~DdTdGHID~~arFi~~~~il~~~~~d~~~ 240 (364)
T d2jera1 161 HVDGQGTVLTTEMCLLSEGRNPQLSKEAIEQKLCDYLNVEKVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTEDQNS 240 (364)
T ss_dssp EECSSSEEEEEHHHHTSTTTCTTSCHHHHHHHHHHHHTCSEEEEECCCSCTTTTSSCGGGTEEEEETTEEEEECCCCTTS
T ss_pred EECCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC
T ss_conf 97799639975455514578999899999999999869863677658755677777754448994799569984388878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~L~~~~da~G~~~~i~~lp~P~~~~~~~~~~~~~~~~~~~~~~~g~~l~aSY~Nfli~N~~VivP~fg~ 320 (364)
T d2jera1 241 PFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIKGSFKIDFVEGTMPREDGDICIASYMNFLITNDGVIVPQYGD 320 (364)
T ss_dssp TTHHHHHHHHHHHHTCBCTTCCBCEEEEECCCSSCEECCTTSCCCCCTTSCCCCTTCEECCCTTCCEEETTEEEEEECSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCC
T ss_conf 35799999999997656534898558862689742333333344534575435689886202578999999999902798
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~D~~Al~~l~~~fP~r~Vv~I~~~~i~~~gG~iHCiT~q~P~~ 364 (364)
T d2jera1 321 ENDRLALEQVQTMFPDKKIVGVNTVEVVYGGGNIHXITQQEPKR 364 (364)
T ss_dssp TTHHHHHHHHHHHSTTSEEEEEECHHHHTTTCCTGGGCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHCCCCC
T ss_conf 77899999999888899799971089875698014463127999
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=27412.82 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~lv~~~l~G~n~~i~a 80 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFA 80 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEEEE
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 96999992789936622589875996799758735789985477788564999998999998999999996698503552
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 YGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~~~~~~ 160 (364)
T d1sdma_ 81 YGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMV 160 (364)
T ss_dssp ECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEECTTSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 23478776201656766551367899998865531034655369999888723632233576545554433133146760
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAGsEr~~~~~~ 240 (364)
T d1sdma_ 161 SVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGS 240 (364)
T ss_dssp EEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSCCCC---
T ss_pred CCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECHHHCCCCCCCCC
T ss_conf 20353000117788978986406600044534354103336359999999703676503567998404100352001466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak 320 (364)
T d1sdma_ 241 AGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVR 320 (364)
T ss_dssp ------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 67502332335643206899999997499757730112138878634999509999996987001899999999999984
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 ~i~n~p~~n~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~l~~e 364 (364)
T d1sdma_ 321 SIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364 (364)
T ss_dssp TCCCCCCCCEECHHHHHHHTTTTCC-----------CCEECCCC
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
T ss_conf 20667835579899999999999999998744027799997559
|
| >d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: 12-oxophytodienoate reductase (OPR, OYE homolog) species: Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]
Probab=100.00 E-value=0 Score=27412.68 Aligned_cols=1 Identities=0% Similarity=-0.560 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~pLFsP~~ig~~~LkNRiv~apm~~~~a~~g~p~~~~~~~y~~rA~gGgliite~~~V~~~g~~~~~~~~l~~d~~ 80 (364)
T d1icpa_ 1 QVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQ 80 (364)
T ss_dssp CCCCCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHH
T ss_pred CCCCCCCCCCCEECCEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCEECHHHH
T ss_conf 99898899972489999678427524489858999797999999999983964999710788873357999853134344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 i~~~k~l~~~ih~~g~~~~~QL~H~Gr~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~~f 160 (364)
T d1icpa_ 81 VEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEF 160 (364)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 45677888886237882577640477554554445788875323456531112346565678887311066799999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~aA~rA~~AGfDgVeIH~ahGyLl~QFlSp~tN~RtDeYGGsleNR~Rf~~Eii~aIr~~~g~~~i~~r~s~~~~~~~~ 240 (364)
T d1icpa_ 161 RVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEA 240 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTC
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
T ss_conf 99999999839986898305762131200110077675444204320167898765420124886466886043224677
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~vi~~g~~~~~~ae~~l~~g~aD~V~~ 320 (364)
T d1icpa_ 241 GDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAY 320 (364)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEHH
T ss_conf 67516777889987752032245665158655455455447889999986478789978989999999998699765056
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 gR~~iadPd~~~k~~~g~pi~~~~~~~~~~~~~~~g~~~~p~~~ 364 (364)
T d1icpa_ 321 GRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLE 364 (364)
T ss_dssp SHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC
T ss_pred HHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCC
T ss_conf 79999790499999709998988611342799998848798889
|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: ClpX species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=0 Score=27411.71 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~tP~ei~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvG 80 (364)
T d1um8a_ 1 LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSG 80 (364)
T ss_dssp CCSCCCCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSS
T ss_pred CCCCCCCHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 97779887999999589623808999999999998998887788764044443311112233456787532441899863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 KTElAk~LA~~~~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~ 160 (364)
T d1um8a_ 81 KTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSG 160 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------C
T ss_pred HHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 78999999864435331112220144316676312103445420245899865463010166653134544555512214
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d1um8a_ 161 EGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILH 240 (364)
T ss_dssp HHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGG
T ss_pred HHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 38898645540586122587778767764168996113455411131014566543014454310001100124666530
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~G 320 (364)
T d1um8a_ 241 LVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTG 320 (364)
T ss_dssp GCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCC
T ss_conf 24578776530079999872301557402099999999879999999999998757927999899999999956587778
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 AR~L~riie~~l~~~~f~~p~~~~~~v~I~~~~V~~~~~~~~i~ 364 (364)
T d1um8a_ 321 ARGLRAIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEPLIIA 364 (364)
T ss_dssp GGGHHHHHHHHHHHHHHTGGGGTTSEEEECHHHHTTSSCCEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCCCCEEEC
T ss_conf 36789999999999855587789999997778867998881439
|
| >d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Clostridium symbiosum [TaxId: 1512]
Probab=100.00 E-value=0 Score=27410.63 Aligned_cols=1 Identities=0% Similarity=-1.324 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~waD~~r~~~v~aN~~~~~d~~~A~~~GAdGIGL~RTEflfl~~~~~p~~~~~~~~~~~e~~~~ 80 (364)
T d1kbla1 1 IETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEADRIMKIRKMILSDSVEAREE 80 (364)
T ss_dssp CCEECCCCCHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHTTCCSEEEECCTHHHHSHHHHHHHHHHHHCCSHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 99768887448999999877467107998289999999999769971548888998727876540566663367266799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~q~~~y~~i~~~~~g~pvtiRtlD~g~dk~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~E~NP~LG~RGiR~ 160 (364)
T d1kbla1 81 ALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRL 160 (364)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTTCCEEEECCCSCGGGGSCCSHHHHHHHHHHHTCCHHHHHHHHHHHCCSCGGGSSCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998887877899999860898679851568864467873156899998739987887665424455784224433213
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~~p~lf~~QlrAilrA~~~~~~~~g~~~~~~Im~Pmv~~~~E~~~~k~~i~~~~~~l~~~~~~~~~~~iG~MiE~Psa 240 (364)
T d1kbla1 161 AVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRA 240 (364)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHH
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH
T ss_conf 42665236888999999999978843875431441131304999999998888899997530387766148775011599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 al~~d~~~~~vDF~SIGTNDLtQy~la~dRd~~~~~l~~y~~~~i~~~dP~~~~~~~av~~lI~~~~~~~~~~~~~i~vs 320 (364)
T d1kbla1 241 ALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCG 320 (364)
T ss_dssp HHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 97189987327679963306878887433253255665554420022375104406999999999999999737998699
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 iCGE~asdp~~~~~L~~lGi~~lS~sp~~vp~~r~a~aqa~~~~ 364 (364)
T d1kbla1 321 ICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNN 364 (364)
T ss_dssp ECSGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf 71731159999999998699989978046699999999987439
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=27410.38 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~ 80 (364)
T d1omwa3 1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80 (364)
T ss_dssp CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CCHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
T ss_conf 97776851018842889099999999999799999984587542667999999999999985089985889999999899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~ 160 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred EEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCC
T ss_conf 88999991489838999873255327899999999999999999779622044422167858896798220102333788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 240 (364)
T d1omwa3 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240 (364)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 64331134554216876038999844104677899999985999888899899999998604688878877899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d1omwa3 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 320 (364)
T ss_dssp HHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC--------------------CCCCSSSSGG
T ss_pred HHHCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHH
T ss_conf 99856698880887435799997491023789879962889959379988888687454665881011379889757899
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~q~~~ 364 (364)
T d1omwa3 321 YRNFPLTISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGH 364 (364)
T ss_dssp GTTCCEECHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
T ss_conf 84687657637788888876644526578888642271633389
|
| >d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Glycerol dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27409.15 Aligned_cols=1 Identities=0% Similarity=0.536 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~m~~~~~~P~rii~G~gal~~l~~~l~~~g~r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~v~~~~~~~~~i~~~~~~~ 80 (364)
T d1kq3a_ 1 HMITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSGLV 80 (364)
T ss_dssp CCCBCCCCCSEEEEETTGGGGHHHHHHTTCSEEEEEECHHHHHHTTCTTGGGGCSSSEEEEEECCSSCBHHHHHHHHTTC
T ss_pred CCCCCEECCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 99755778978798059999999999973993899989865564799999998886698699618989807999999975
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~D~IIavGGGs~~D~aK~ia~~~~~P~I~IPTTa~tgse~t~~avi~~~~~~~k~~~~~~~~P~~viiDp~l~~t~P 160 (364)
T d1kq3a_ 81 EEETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLVDTEIVAKAP 160 (364)
T ss_dssp CTTCCEEEEEESHHHHHHHHHHHHHTTCCEEEEESSCCCSCTTSSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHHSC
T ss_pred HCCCCEEEEECCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEECCHHHHHHH
T ss_conf 20576899813675410101223334210124225433332446513786326775311200244533887716666435
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~Dal~h~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 240 (364)
T d1kq3a_ 161 ARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLS 240 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCBCTTSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88886217888653777765554214001015555568999999999999988887777640337999999999877875
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~~~~~~~~~~~H~~~~~~~~~~~~~~~~HG~~va~~~~~~~~~~~~~~~~~~~i~~l~~~lglP~~L~elGi~~~~~~~ 320 (364)
T d1kq3a_ 241 GLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLAEIGLDGVSDED 320 (364)
T ss_dssp HHHHHHHCCCHHHHHHHHHTTSGGGTTSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCCCSGGGGTCTTCCHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHH
T ss_conf 34213445566520002254523764202107899889999875406799999999999985999989992999998999
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 l~~ia~~a~~~~~~~~~~P~~~t~edi~~il~~A~~~~~~~~~~ 364 (364)
T d1kq3a_ 321 LMKVAEKACDKNETIHNEPQPVTSKDVFFALKAADRYGRMRKNL 364 (364)
T ss_dssp HHHHHHHHTCTTSGGGGSSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999998727775658996899999999999999998875579
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=100.00 E-value=0 Score=27407.88 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~l~~~~~~~f~~G~av~~~~~~~~~~~~~~~~~~~~~~~fn~~t~eN~mKW~~iep~~G~~nf~~~D~~v~~a 80 (364)
T d1us3a2 1 AYSANVDHLRDLAPSDFPIGVAVSNTDSATYNLLTNSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWA 80 (364)
T ss_dssp CCCCCCSCGGGGCSSSCCEEEEEBCTTCTTTBTTTCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 97564358999703689478885276555422246778999999768823165467768855889836838999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~gi~v~GH~lvW~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~ 160 (364)
T d1us3a2 81 TENNMTVHGHALVWHSDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAF 160 (364)
T ss_dssp HHTTCEEEEEEEEECCGGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHH
T ss_pred HHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 98889899950687865578643235786579999999999999987524688357999860444578876556666437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p~~~~i~~~ 240 (364)
T d1us3a2 161 YVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAA 240 (364)
T ss_dssp HHHTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 77708833999999999998640343211565334663134678999999986899655532410025799998999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~~~~~~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~D~~sW~~ 320 (364)
T d1us3a2 241 MKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLD 320 (364)
T ss_dssp HHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBGGGCHHH
T ss_pred HHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 99998549905887404741467665444444688875899999999999999998455623455699815874876556
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~lL~d~d~~pKPAy~av~~~L~g~~~~~~~ 364 (364)
T d1us3a2 321 GLYREQFEDEKISWPLLFDNNYNDKPALRGFADALIGTQCTNTH 364 (364)
T ss_dssp HHTTTTTTTCCCCCCSSBCTTSCBCHHHHHHHHHHHTCCCCSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 87777666666687866889989988999999997799887889
|
| >d1oc7a_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Humicola insolens, Cel6a [TaxId: 34413]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Humicola insolens, Cel6a [TaxId: 34413]
Probab=100.00 E-value=0 Score=27407.57 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~p~~gNPf~g~~~yvnP~~~~~v~~~a~~~~~d~~~~a~~~~va~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 80 (364)
T d1oc7a_ 1 APYNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQ 80 (364)
T ss_dssp CCCCSCTTTTCEECCCHHHHHHHHHTTGGGCCCHHHHHHHHHHTTSCCCEEECSGGGTTTHHHHHHHHHHHHHHTTCSSC
T ss_pred CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 99789988898332474077899999873468988999999985378279711477777522778999999987214788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~lVvY~iP~RDC~a~as~Ge~~~~~~g~~~y~~Yid~I~~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~ 160 (364)
T d1oc7a_ 81 YAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAAST 160 (364)
T ss_dssp EEEEEEECCCTTCSTTSSSCCCCCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECTTSTHHHHHCTTSHHHHHHHHH
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHH
T ss_conf 51389994799987320004897545766468899999999999975688634999777622223306880666778999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~i~yAi~~l~~pnv~vYlDaGhsgWLgw~~n~~~~a~~~a~~l~~ag~~~~vrGFatNvsNy~~~~~~~~~~~~~~n 240 (364)
T d1oc7a_ 161 YRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPN 240 (364)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEECCCTTTTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTCCCCSSCSSCCGGGTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999999997169973899978877666760001268999999998647864343378704477666667887544578
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~dE~~y~~~l~~~l~~~G~~~~fvIDTsRNG~gp~~~~~~g~WCN~~GaglG~rPt~~t~~~~vDA~lWIKpPGESDG 320 (364)
T d1oc7a_ 241 PNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNG 320 (364)
T ss_dssp SCCSHHHHHHHHHHHHHHTTCCCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 76259999999999997458887448870467889877778888779999826889978999877677887588847788
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~~~~~D~~C~~~~a~~~aP~AG~Wf~~~f~~Lv~NA~P~f 364 (364)
T d1oc7a_ 321 TSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF 364 (364)
T ss_dssp CCCTTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 88876666676667655789998677752999999997268999
|
| >d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: SepSecS-like domain: Selenocysteinyl-tRNA synthase (SepSecS) species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=27406.99 Aligned_cols=1 Identities=0% Similarity=-0.161 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~n~~~~~~~~~l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~e~~~~t~g~t~a~~~~~~ 80 (364)
T d2e7ja1 1 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMH 80 (364)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 97566841027968999999999984477510034666411135708999999999998695979997969999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~ 160 (364)
T d2e7ja1 81 SLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVK 160 (364)
T ss_dssp HHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHH
T ss_pred HHHCCCCEEEEECCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCH
T ss_conf 98679967974046431110688851211798630356433257999976655410467716999605779984552311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~I~~ia~~~~i~livD~a~~~g~~~~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (364)
T d2e7ja1 161 KIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGC 240 (364)
T ss_dssp HHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTC
T ss_pred HHEECCCCCCCHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 00000023321111144323444320133332213530331012788888999988799999985156657663333310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
T d2e7ja1 241 TARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRE 320 (364)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHH
T ss_conf 03235799999999988999999987777788999999975986457888876559983541477789753256677988
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
+
T Consensus 321 l~~~~~~~~~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~ys 364 (364)
T d2e7ja1 321 LKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKYS 364 (364)
T ss_dssp HHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 87658713457876269980567999999999999999999759
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=0 Score=27411.17 Aligned_cols=1 Identities=0% Similarity=-0.327 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~ripsl~~~~~~~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~ 80 (364)
T d1w0pa3 1 VIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPI 80 (364)
T ss_dssp EEECTTCEEEEEEECSSSTTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEE
T ss_conf 93468973547989807899899999623378998655896459999937897589998883158877786534577699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~d~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 160 (364)
T d1w0pa3 81 YDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIVNPGPGHGITLTRQQNISGSQNGRLIYPAI 160 (364)
T ss_dssp EETTTTEEEEEEEEEETTCCSGGGCCCTTSCCEEEEEEEETTTTEECCCEEECCSSCCEECCCCTTSTTCCTTCEEEEEE
T ss_pred EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE
T ss_conf 97999969999975178877566455355448579986579998512352146420003505797120351992999788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~s~d~g~tw~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~l~~~~R~~~~~~~~~~~~~~~~~~ 240 (364)
T d1w0pa3 161 VLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQF 240 (364)
T ss_dssp EESSSCEEEEEEEESSSSSSCEECCCCCCCEEESSSSCEEECEEEEEEEEECTTSCEEEEEEEESCCEETTEECCSEEEE
T ss_pred EECCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEE
T ss_conf 50578885037885168857886455676665334544345788722699965865678998157865577688975999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~gR~~~~l~~S~D~G~TW~~~~~l 320 (364)
T d1w0pa3 241 LSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQL 320 (364)
T ss_dssp EESSSSSSCEEEEEEEGGGSTTCCSSCCCCEEEEEECTTSCEEEEEEEECTTTTTSSSSBSEEEEEESSTTSCCEEEEEC
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEE
T ss_conf 97589842235546753335776788632014776057896389996787876577860125999984799679997497
Q ss_pred -------------------------------------------C
Q ss_conf -------------------------------------------8
Q 001738 683 -------------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------------~ 683 (1019)
+
T Consensus 321 ~~g~~~Ys~~~~~~~g~~~~~ye~~~~~i~~~~~~~~~l~~~~~ 364 (364)
T d1w0pa3 321 VNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLT 364 (364)
T ss_dssp CSSBCCSEEEEECSSSEEEEEEECGGGCEEEEEEEHHHHGGGTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEHHHHHCCCC
T ss_conf 28997787327928998999999499838999987999521059
|
| >d1m7va_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitric oxide (NO) synthase oxygenase domain superfamily: Nitric oxide (NO) synthase oxygenase domain family: Nitric oxide (NO) synthase oxygenase domain domain: Nitric oxide (NO) synthase oxygenase domain species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27343.60 Aligned_cols=1 Identities=0% Similarity=-0.493 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~s~~e~l~~eA~~Fi~~~y~e~~~~~~~~~Rl~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V~D~ 80 (363)
T d1m7va_ 1 GSHMEILWNEAKAFIAECYQELGKEEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVIDR 80 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCSCGGGGGGCEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEC
T ss_conf 97678999999999999998648632489999999999974177438999998878998714552323002275725656
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 R~v~t~~~m~eal~~Hl~~AtN~G~Ir~~ITVF~p~~~~~~~~RIwN~QLirYAGY~~dg~iiGDP~~vefT~~c~~lGW 160 (363)
T d1m7va_ 81 RDVRTKEDVRDALFHHIETATNNGKIRPSITIFPPEEKGEKQVEIWNHQLIRYAGYESDGERIGDPASRSLTAACEQLGW 160 (363)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHGGGSCCCEEEECCCCSSSCCSEEECCSBSSCBCEEC--CCCEECGGGHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 68999899999999999997079987623898078778999865644888866175889983689526899999997599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~t~FDvLPlviq~~g~~~P~~feiP~~lvlEV~i~HP~~~~f~~LgLkWyavP~iS~M~L~iGGi~y~aaPFNGWYM 240 (363)
T d1m7va_ 161 RGERTDFDLLPLIFRMRGDEQPVWYELPRSLVIEVPITHPDIEAFSDLELKWYGVPIISDMKLEVGGIHYNAAPFNGWYM 240 (363)
T ss_dssp CCCCCTTCBCCEEEEETTCSSCEEECCCTTTCCEEECCCSSCGGGGGGCCEEESCCEECSCEEEETTEEESCCCEECCEE
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEECCCHHHEEEECCCCCCCHHHHHCCCCEEECHHHCCCHHHCCCEEECCCCCCCCEE
T ss_conf 99899888403899967999981331887783675157989755776698632032332240310888542456343422
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~TEIgaRnl~D~~RYn~L~~VA~~mGlDt~~~~sLWkDrAlvElN~AVLhSF~~~gVtivDHHtas~~F~~f~~~E~~~~ 320 (363)
T d1m7va_ 241 GTEIGARNLADEKRYDKLKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKQGVSIVDHHTAASQFKRFEEQEEEAG 320 (363)
T ss_dssp HHHHHTTTTTCTTTTCCHHHHHHHTTCCCSCGGGTHHHHHHHHHHHHHHHHHHHHTCCEECHHHHHHHHHHHHHHHHHTT
T ss_pred EHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHC
T ss_conf 00230244555777774799999948888997215778899999999999999879647052788999999999999818
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 r~~~gdW~WlvPP~S~s~tpvfH~~~~~~~~~Pnf~yq~~pw~ 363 (363)
T d1m7va_ 321 RKLTGDWTWLIPPISPAATHIFHRSYDNSIVKPNYFYQDKPYE 363 (363)
T ss_dssp CCCBCCHHHHSCSSSGGGSGGGGSCCBCCCCSSEEECCCCTTC
T ss_pred CCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9999984377788864344277776544445887502788899
|
| >d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
Probab=100.00 E-value=0 Score=27339.89 Aligned_cols=1 Identities=0% Similarity=-0.228 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGilAADeS~gT~~Krl~~igventeenr~~yR~~lftsp~f~~~~IsGvILfe 80 (363)
T d1zaia1 1 PHSHPALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFH 80 (363)
T ss_dssp CCCCCSSCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999980589869982689983777898769999778999999987148512205446897648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLd~L~~rl~~y~~~Ga~faKwRsVi~i~~~~ps~ 160 (363)
T d1zaia1 81 ETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSA 160 (363)
T ss_dssp HHHTCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCSSSCSCH
T ss_pred HHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
T ss_conf 87511225998622566515854467347653336788644135662239999999986686513112102235677740
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~v~~~l~~~~V~leg~lLKpnMv~~g~~~~ 240 (363)
T d1zaia1 161 LAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACT 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 24899899999999999865842002353442476315788999999999999876412323467501355666754355
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamNk~~~~~pW~lsfSfgRALQ~~~lk~W~g~~~n~ 320 (363)
T d1zaia1 241 QKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENL 320 (363)
T ss_dssp SCCCHHHHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESHHHHHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCH
T ss_conf 54886675566555654058977772110578765889999999986036899976999751766489999847882258
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
-
T Consensus 321 ~aaQ~~~~~ra~~Ns~A~~G~y~~~~e~~~~~~~~l~v~~~~y 363 (363)
T d1zaia1 321 KAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 363 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCSSSCCCCCCCCCCSCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999985468765850787776754455520067659
|
| >d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PEP carboxykinase-like superfamily: PEP carboxykinase-like family: PEP carboxykinase C-terminal domain domain: Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27339.24 Aligned_cols=1 Identities=0% Similarity=-0.562 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
=
T Consensus 1 WLAEHMlIlgvt~P~g~~~yvaaAFPSaCGKTnlAMl~p~~pGwkv~~vGDDiawi~~~~dG~l~AiNPE~G~FGVapgt 80 (363)
T d1khba1 1 WLAEHMLVLGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGT 80 (363)
T ss_dssp CEEESCEEEEEECTTSCEEEEEEECCTTSCHHHHHTCCCCSTTCEEEEEESSCEEEEECTTSBEEEECCCSEEEEECTTC
T ss_pred CHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 92352343032489997799987567443421088718899996778941746777787889678536655753447898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~tnp~am~~l~~~~IFTNValt~DG~vwWeG~~~~~~~~~~~~~w~g~~~~~~~~~paaHpNsRFt~p~~qcp~id~~ 160 (363)
T d1khba1 81 SVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLASGVTITSWKNKEWSSEDGEPCAHPNSRFCTPASQCPIIDAA 160 (363)
T ss_dssp CTTTCHHHHHHTTBSCEEESCEEETTSCEECTTCCCCCCTTCCEECTTSSEECTTSSSCSSCTTCEEEEEGGGCTTBCTT
T ss_pred CCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 98889999997536852443567789974678898889877524678899888888997778875202137669866843
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 wedP~GVpIsaiiFGGRr~~t~PlV~ea~~W~hGV~~GAtm~SE~TAAa~g~~g~vrrdPmAMlpF~gyn~gdY~~hWL~ 240 (363)
T d1khba1 161 WESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLS 240 (363)
T ss_dssp TTCTTCEEEEEEEEECCCSSSCCSEEECSSHHHHHHHHHTCEEEC--------CCEEECGGGCTTTCSSCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEECHHHHHHHHCCCCCEECCCHHHHHHCCCCHHHHHHHHHH
T ss_conf 35987514778997565688887248731466607873210104567764146864318066543328898999999876
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~g~~~~~k~PkIF~VNWFrKd~~GkFLWPGfGeN~RVLkWI~~Rv~G~~~A~eTPIG~vP~~~dLd~~GL~~~~~~el~~ 320 (363)
T d1khba1 241 MAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGHINMMELFS 320 (363)
T ss_dssp GGGSTTCBCCEEEEECSCCBCTTSCBSSCCGGGGHHHHHHHHHHHTC--CEEEETTEEEECTTCSCCTTCCCCCHHHHTC
T ss_pred HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 51246567984799976534588886578863156999999998649755201676312683446866788666999838
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 vd~~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~~m 363 (363)
T d1khba1 321 ISKEFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRISQM 363 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 7999999999999999998733305099999999999999649
|
| >d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glutaminase/Asparaginase superfamily: Glutaminase/Asparaginase family: Glutaminase/Asparaginase domain: Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27336.33 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~lPkI~ii~TGGTIa~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~~~~~~dS~~~~~~~~~ 80 (363)
T d1zq1a2 1 KPEVHFEALIEGKPGLPEVTIIGTGGTIASRIDYETGAVYPAFTAEELAKALPEIFEVANVKPKLLFNIFSEDMKPKHWV 80 (363)
T ss_dssp CCCCCCCSSCCCCTTCCEEEEEECSCCCCEEEETTTTEEEECCCHHHHHHHCGGGGGTSEEEEEECCCCCGGGCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCEEEEEEECCCCCHHCCHHHHH
T ss_conf 98644345688999999799997787314046687783378799999998575455125267999633896247999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~~i~~~~~~~d~G~VvtHGTDTl~eTA~~L~~~l~~~~kPVVlTGa~~P~~~~~sDg~~NL~~Al~~A~~~~~~v~v 160 (363)
T d1zq1a2 81 KIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSVRMATSEVAEVMV 160 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHHHHHTSSBCSEEE
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 99999998632777737983587739999999999724899638996334135677751077899999998565666326
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~i~~a~~v~K~~t~~~~aF~sp~~~pLg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pG 240 (363)
T d1zq1a2 161 VMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWPNGEIEFLRKDYRKRSDEEVEVDDKIEEKVALVKVYPG 240 (363)
T ss_dssp EEESSSSSSCEEEEETTSEEECBSSCSTTEEECSSCCSEEECTTSCEEESCSCCCBCCCCCCEECCCCCCCEEEEECCTT
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 75200143145532131012345655444468776744899738879862454468887534554245785799993699
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~l~~~~~~g~~GiVl~g~G~Gnvp~~~~~~l~~a~~~gi~VV~~Sqc~~G~v~~~~Y~~g~~l~~~GvI~~gdlt~ 320 (363)
T d1zq1a2 241 ISSEIIDFLVDKGYKGIVIEGTGLGHTPNDIIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRKLLKAGVIPCEDMLP 320 (363)
T ss_dssp CCTHHHHHHHHTTCSEEEEEEBTTTBCCGGGHHHHHHHHHTTCEEEEEESSSBSCCCCSSSHHHHHHHHTTCEECTTCCH
T ss_pred CCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCEEECCCCCH
T ss_conf 99999999985798369998555888856788999999747926999368787885777654437788699898899899
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 ekArikLm~lL~~~~~~~eI~~~f~~nl~GE~t~~~~~~~~~~ 363 (363)
T d1zq1a2 321 ETAYVKLMWVLGHTQNLEEVRKMMLTNYAGEITPYTRFDTYLR 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHSCSSTTSCSSCBTTCSCC
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999859999999999971366853688766666569
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27334.37 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (363)
T d2c5aa1 1 TYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV 80 (363)
T ss_dssp CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred CHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHCC
T ss_conf 92231356737878987999788878999999999978298999968985211342356727993515589899876148
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~ 160 (363)
T d2c5aa1 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD 160 (363)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76731023322222222222222222221246777767751752202446654235554456554554346677689888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~ 240 (363)
T d2c5aa1 161 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH
T ss_conf 78999999999999999984997899982157616876432222221100000113345543438998578874002778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~t 320 (363)
T d2c5aa1 241 EGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRIT 320 (363)
T ss_dssp HHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99999985788882797168765389999999998689875476899998641455889999986999788999999999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 i~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (363)
T d2c5aa1 321 YFWIKEQIEKEKAKGSDVSLYGSSKVVGTQAPVQLGSLRAADG 363 (363)
T ss_dssp HHHHHHHHHHHHHHTCCGGGGGSCCCCCCCCCCCTTCCCCSCC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
T ss_conf 9999998876541454432145331110105312476233789
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=0 Score=27334.16 Aligned_cols=1 Identities=0% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 p~~~~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G 80 (363)
T d1onha_ 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYYTFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARG 80 (363)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC
T ss_conf 98979999999999999998389986999999999999995876006779889999978720559999999999998669
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~llg~i 160 (363)
T d1onha_ 81 EISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIGLFGAL 160 (363)
T ss_dssp SCCTTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHHH
T ss_conf 62242021011100244434555065676530467544586455788999999987554148740231256410013555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ie~~tg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~~~~~~l 240 (363)
T d1onha_ 161 AVKPSGMPYEQAMTTRVLKPLKLDHTWINVPKAEEAHYAWGYRDGKAVRAVRVSPGMLDAQAYGVKTNVQDMANWVMANM 240 (363)
T ss_dssp HTGGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCCSSTTHHHHHCCEECHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEECHHHHHHHHHHHH
T ss_conf 56404997004457888861696421446870014652136665974541011024445656614417999999999860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~G~ 320 (363)
T d1onha_ 241 APENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVEANTVVEGSDSKVALAPLPVAEVNPPAPPVKASWVHKTGS 320 (363)
T ss_dssp CGGGCCSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCHHHHHHHHSHHHHTSCEECEEEEEEECCCSSEEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 68877716788888775321045787566655020366655554445777542113444445677777778747972365
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~G~~s~~~~~P~~~~~ivvl~N~~~~~~~~~~~a~~i~~al~ 363 (363)
T d1onha_ 321 TGGFGSYVAFIPEKQIGIVMLANTSYPNPARVEAAYHILEALQ 363 (363)
T ss_dssp CSSCEEEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 7875299999977997999997489998899999999999639
|
| >d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Pentaerythritol tetranirate reductase species: Enterobacter cloacae [TaxId: 550]
Probab=100.00 E-value=0 Score=27334.15 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~e~LF~P~~ig~~~lkNRiv~apm~~~~a~~~g~~~~~~~~~yy~~ra~~Glii~e~~~V~~~~~~~~~~~~l~~d~~i~ 80 (363)
T d1vyra_ 1 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIA 80 (363)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHH
T ss_pred CCCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHCC
T ss_conf 95047983689989788738763468767798998989999999997086979981268885335799987437735503
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~k~l~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~ 160 (363)
T d1vyra_ 81 AWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVN 160 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 20033445652697046644126765454436787630101223555555344766664557877764566777999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~f~~AA~rA~~aGfDgVEIH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~Eii~aIr~~~g~d~i~~r~s~~~~~~ 240 (363)
T d1vyra_ 161 DFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 240 (363)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
T ss_conf 99999999997513403451467103111446766566654464033444767888765553047887412311323311
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~gg~~~~e~~~~~~~l~~~gvd~i~vs~~~~~~~~~~~~~~~~~~~~~~~~~vi~~G~~t~~~ae~~l~~G~~DlV~ 320 (363)
T d1vyra_ 241 NVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVA 320 (363)
T ss_dssp TBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred CHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCEEH
T ss_conf 10001330688999999877429806620347766786532888999898658539966899999999999879965115
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 ~gR~liadP~~~~K~~~g~~~~~~~~~~~~~~~~~~y~~y~~~ 363 (363)
T d1vyra_ 321 FGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYTDYPSL 363 (363)
T ss_dssp ESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSSTTTTCSCCC
T ss_pred HHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 5499987921999998389999998754237999985789898
|
| >d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27333.95 Aligned_cols=1 Identities=100% Similarity=0.670 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 M~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~e~i~~~dail~Gaig~P~ 80 (363)
T d1cnza_ 1 MSKNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPK 80 (363)
T ss_dssp CCCCEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCC
T ss_conf 99986699989888559999999999999866619706999996428799974996889999999850413772257878
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~~g~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~~~~~ 160 (363)
T d1cnza_ 81 WENLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK 160 (363)
T ss_dssp GTTSCGGGSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECCGGGCE
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCEE
T ss_conf 65543456644006799999738825777776125655323576554679842899874135433576531316885203
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~t~~~~~ri~r~Af~~A~~r~~kVt~v~KaNv~k~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (363)
T d1cnza_ 161 AFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQSSILWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQF 240 (363)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred ECCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCC
T ss_conf 32237764899999999999999966995689813753304487899999986228874975176658999986455777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglG~~~s~ni~~~~~a~fEp~HGsapdiaGk~~aNP~a~Ils~ammL~~~lg~~~~A~ 320 (363)
T d1cnza_ 241 DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDANDAAT 320 (363)
T ss_dssp SEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CEEEEHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 66642357777678899887504542111034036407851677765334798864909999999999984189879999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 ~i~~Av~~~l~~g~~T~Dl~~~~~~~~T~e~~dai~~~l~~~~ 363 (363)
T d1cnza_ 321 AIEQAINRALEEGVRTGDLARGAAAVSTDEMGDIIARYVAEGV 363 (363)
T ss_dssp HHHHHHHHHHHTTCCCGGGTTTTTCCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9999999999769967564689974899999999999987019
|
| >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Hypothetical protein YteR domain: Hypothetical protein YteR species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=0 Score=27333.61 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~a~~~~~~~~~~~~~p~~~W~W~~G~~~~gl~~lye~Tgd~~y~~~a~~~~~~~~~~~g~~~~~~~~~d~~ 80 (363)
T d1nc5a_ 1 KSPLTYAEALANTIMNTYTVEELPPANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAI 80 (363)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTSSSTTCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGT
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 97579999999999973665348999982775649999999999883999999999999999844478745778987415
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~l~~ly~~Tgd~~y~~~a~~~~~~l~~~~~~~~g~~~~~~~~~~~~wiD~l~M~~p~l~~~~~~tgd~~y~d~a~~ 160 (363)
T d1nc5a_ 81 QAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 160 (363)
T ss_dssp GGGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 88999999998728688999999999862137878878631367887773642067748999999998698789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~l~d~~~gL~~h~~~~~~~~~~~~~~~~~~~~~WsRGngW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~ 240 (363)
T d1nc5a_ 161 QESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSI 240 (363)
T ss_dssp HHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999997515889986525455676677788888786501100019999879999867777800999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~q~~d~G~w~~~~d~p~~~~~~~etSata~~~y~l~~g~~~g~l~~~y~~~~~ka~~~l~~~~~~~~~~g~~~v~~~~ 320 (363)
T d1nc5a_ 241 CRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDIC 320 (363)
T ss_dssp HTTSCTTTSCCBSBTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSSCGGGHHHHHHHHHHHHHHHEEECTTSCEEECCEE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 84558878662310567777898633589999999999998758444999999999999999987403899874650357
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 ~g~~~~~~~~y~~~~~~~~~~~G~g~fllA~~e~~~l~~~~~~ 363 (363)
T d1nc5a_ 321 VGTSAGFYDYYVSRERSTNDLHGAGAFILAMTELEPLFRSAGK 363 (363)
T ss_dssp CSCCSCCHHHHHTSCEESSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 7899998200126787578757799999999999999984289
|
| >d1kwfa_ a.102.1.2 (A:) CelA cellulase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Cellulases catalytic domain domain: CelA cellulase species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=0 Score=27330.99 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~p~~~~~~~~~~~~~~~qa~~~~~~~~~w~~~k~~~~~~~~~~~~~rv~d~~~~~~~t~SEGQgYGMl~Av~~~d~~~ 80 (363)
T d1kwfa_ 1 AGVPFNTKYPYGPTSIADNQSEVTAMLKAEWEDWKSKRITSNGAGGYKRVQRDASTNYDTVSQGMGYGLLLAVCFNEQAL 80 (363)
T ss_dssp CCSSCCCCCSSSCSCSSSCHHHHHHHHHHHHHHHHHHHEECTTSTTSCEECCCGGGTTCEEHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHH
T ss_conf 99887788888766778757899999999999999998066798872488717988987312789999999998499999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Fd~l~~wt~~~l~~~~L~aW~~~~~~~~~~~~~d~n~AtDgDl~iA~ALl~A~~~Wg~~~~~~Y~~~A~~ii~~i~~~~v 160 (363)
T d1kwfa_ 81 FDDLYRYVKSHFNGNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCV 160 (363)
T ss_dssp HHHHHHHHHTTBCTTSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999974566888536778999877677888989768999999999999774874088999999999999998510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~~W~~v~~~s~~ll~~~~~~~~~tGL~pDw~~~~~~p~~~~~ 240 (363)
T d1kwfa_ 161 EHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPASGQS 240 (363)
T ss_dssp CTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTTTSTTSCCCCSSBCTTSSCCTTSC
T ss_pred CCCCCEECCCCCCCCCCEECHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78984553676568988558032359999999963687338999999999999976405888888400046888588898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~ydA~Rvp~~ia~d~~~~g~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~G~~~~~~~~~~f~A~~~~~~~~~~~~~~ 320 (363)
T d1kwfa_ 241 YDYKYDATRYGWRTAVDYSWFGDQRAKANCDMLTKFFARDGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMTGYDLNF 320 (363)
T ss_dssp CSBSTTGGGHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCGGGCCSCBCTTSCBCCCCCCTTTHHHHHHHHTTSSCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 87565599999999998750157145899999999998459888750481698446888979899999999873588589
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~YY~~~L~Ll~ll~~sG~~~~p~~~~ 363 (363)
T d1kwfa_ 321 AKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNFPNPLSDL 363 (363)
T ss_dssp HHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHTTCCCCTTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999987522467777887899999999999749989887679
|
| >d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes family: D-aminoacid aminotransferase-like PLP-dependent enzymes domain: Branched-chain aminoacid aminotransferase species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=0 Score=27330.51 Aligned_cols=1 Identities=200% Similarity=1.865 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~ 80 (363)
T d2a1ha1 1 SSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80 (363)
T ss_dssp CCCCGGGCEECCCSSCCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCEEEECCCCEECCCHHHCCCCCEEEEEEEEEE
T ss_conf 97542115999767998898972237777755651799992288300887868412610720111304424353689998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~g~i~lFrld~Hl~RL~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~ 160 (363)
T d2a1ha1 81 GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRAL 160 (363)
T ss_dssp CTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEE
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 79997899735788777888889757999876899999999998777526654465379997622677644566776662
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~dg~v~E~~~sN 240 (363)
T d2a1ha1 161 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMN 240 (363)
T ss_dssp EEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEE
T ss_conf 14897603456750013644689751011467545534214556422226888761489501100013451489616607
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 iF~v~~~kdG~~~l~tppl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~ 320 (363)
T d2a1ha1 241 IFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHR 320 (363)
T ss_dssp EEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEE
T ss_conf 99998358885799723654334674489999999997399820664779999996765599618998478858999999
Q ss_pred ------------------------------------------C
Q ss_conf ------------------------------------------8
Q 001738 683 ------------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------------~ 683 (1019)
+
T Consensus 321 I~~~~~~~~i~~g~~g~~it~~L~~~l~~iq~G~~~~~W~~~v 363 (363)
T d2a1ha1 321 ILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV 363 (363)
T ss_dssp EEETTEEEECTTGGGTTHHHHHHHHHHHHHHTTSSCCTTEEEC
T ss_pred EEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf 9867964893899808899999999999976788899973579
|
| >d1umga_ d.280.1.1 (A:) ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Sulfolobus fructose-1,6-bisphosphatase-like superfamily: Sulfolobus fructose-1,6-bisphosphatase-like family: Sulfolobus fructose-1,6-bisphosphatase-like domain: ST0318 species: Archaeon Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=0 Score=27268.08 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 k~TvSvIKADVGg~~GHt~~hp~ll~~a~~~l~~a~~~glliD~~v~~~GDDi~limTH~~G~d~~eiH~lAW~aF~~~t 80 (362)
T d1umga_ 1 KTTISVIKADIGSLAGHHIVHPDTMAAANKVLASAKEQGIILDYYITHVGDDLQLIMTHTRGELDTKVHETAWNAFKEAA 80 (362)
T ss_dssp CEEEEEEEECCCBBTTTTBCCHHHHHHHHHHHHHHHHTTSCSEEEEEEETTEEEEEEEESSCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 94699997236787777768989999999999861138868877667643742578754689894899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~vAK~l~LYGAGQDLL~DaFSGNvkGmGPgvAEmEf~ERpsEp~~vF~aDKTePGAfNlPlY~~FaDPfnt~GLvidp~m 160 (362)
T d1umga_ 81 KVAKDLGLYAAGQDLLSDSFSGNVRGLGPGVAEMEIEERASEPIAIFMADKTEPGAYNLPLYKMFADPFNTPGLVIDPTM 160 (362)
T ss_dssp HHHHHTTCBTTTTTTCTTSSSSSCCCCCCEEEEEEECCCSSCEEEEEEEESBCGGGGHHHHHHHHHCTTTCTHHHHCGGG
T ss_pred HHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCC
T ss_conf 99887256556621211346765257787437887225789857999853888760120689984284578750317101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 h~Gf~FeV~Dv~~~k~i~l~~Pee~Ydllalig~~~RyvI~~V~~k~~~eiaav~St~RL~~iAG~YvGKDDPV~iVR~Q 240 (362)
T d1umga_ 161 HGGFKFEVLDVYQGEAVMLSAPQEIYDLLALIGTPARYVIRRVYRNEDNLLAAVVSIERLNLIAGKYVGKDDPVMIVRLQ 240 (362)
T ss_dssp TTCEEEEEEETTTTEEEEEETTTTHHHHHHHHTSTTTEEEEEEEETTTCCEEEEECCCCCBCC---CBCCCSCEEEEECS
T ss_pred CCCEEEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHCEECCCCCCEEEEEEC
T ss_conf 36705899970257178851806877899983898735899998668997789976678776406120688866999846
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~gfPA~gEvlepFa~phlVaGwmRGSH~gPlMPV~~~da~~trFdgpPrV~alGFql~~GkL~GP~DlFddpafD~~R~~ 320 (362)
T d1umga_ 241 HGLPALGEALEAFAFPHLVPGWMRGSHYGPLMPVSQRDAKATRFDGPPRLLGLGFNVKNGRLVGPTDLFDDPAFDETRRL 320 (362)
T ss_dssp SSSCCHHHHHHTTSSCCEEEETGGGCEEEECEEECSTTCSCCGGGCSCEEEEEEEEEETTEEEEEEESSCSGGGHHHHHH
T ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCCHHHHHHH
T ss_conf 88996465542244652114434566678743201456887567899768888888627887376324577430689999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 a~~~A~~mR~~Gpf~PhrLp~~emEYttlp~vl~kL~~rf~~ 362 (362)
T d1umga_ 321 ANIVADYMRRHGPFMPHRLEPTEMEYTTLPLILEKLKDRFKK 362 (362)
T ss_dssp HHHHHHHHHTTTTCTTTBCCGGGCSSCCHHHHHHHTTTTCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 999999998549987655897880211388999999887519
|
| >d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Release factor superfamily: Release factor family: Release factor domain: Polypeptide chain release factor 2 (RF2) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27265.74 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~l~~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl~eL 80 (362)
T d1gqea_ 1 INPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGL 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 91689999999999999997769798999999999986397144499999999999999999999999999999988877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Ela~ee~deel~~e~~~~l~~l~~~l~~le~~ll~~~~~D~~nailEIrAGaGG~EA~dfA~~L~RMY~r~ae~~gwk~ 160 (362)
T d1gqea_ 81 LELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKT 160 (362)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHGGGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 87764110588888899999998622467787521367545454379998257606688999999999999999759858
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 eiid~~~~e~gG~K~v~~~I~G~~ayg~Lk~EsGvHRvqRvp~~es~gr~hTS~a~V~v~P~~~~~~~~~i~~~dl~i~~ 240 (362)
T d1gqea_ 161 EIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV 240 (362)
T ss_dssp EEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEE
T ss_pred EEECCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCEECCHHHEEEEE
T ss_conf 99414567766546999999776688999872375048884046777347998778899624787631111767827997
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~rs~g~GGQ~vN~t~savri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~i 320 (362)
T d1gqea_ 241 YRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWGSQI 320 (362)
T ss_dssp ECCCCSSCCSTTSSCCEEEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCCCSCSEE
T ss_pred EECCCCCCCCHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 52699886512033141688744733677764221014789999999999999999999999999887423127576984
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 RtY~~~~~rv~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~~ 362 (362)
T d1gqea_ 321 RSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 362 (362)
T ss_dssp EEEEGGGTEEEETTTCCEESCHHHHHTTCCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCCC
T ss_conf 676589981500053972578468758877999999987779
|
| >d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: Branched-chain alpha-keto acid dehydrogenase, PP module species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=0 Score=27263.12 Aligned_cols=1 Identities=0% Similarity=0.536 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~r~l~~~g~~~~~~~~~ls~e~l~~~yr~M~~~R~~ee~~~~l~~~g~~~~~~~~~GqEA~~vg~~~al~ 80 (362)
T d1umda_ 1 HRFETFTEEPIRLIGEEGEWLGDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIR 80 (362)
T ss_dssp CCCCSSCSSCBCCBCTTSCBCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCC
T ss_conf 99877886764777899989987899979999999999999999999999999977996022278978999999999758
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~D~~~~~yR~h~~~la~G~~~~~~~ae~~gk~~g~~~Grggs~H~~~~~~~~~~~~~ivg~~~p~a~G~A~a~k~~~~ 160 (362)
T d1umda_ 81 PGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRT 160 (362)
T ss_dssp TTTSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 78786873134189999987439999999845568986543542124212367444444223230077777876530344
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~v~v~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~~aist~~~~~~~~~~~~~~a~~~gi~~~~vDGnDv~~v~~ 240 (362)
T d1umda_ 161 GQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYY 240 (362)
T ss_dssp CCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHH
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHH
T ss_conf 42356522688656773499997764336870366520366644321011145344422232100026744505889999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~~~Ai~~~R~g~gP~lIE~~tyR~~gHs~~Dd~~~YR~~~Ei~~w~~~DPi~~~~~~L~~~g~~se~e~~~i~~ei~~~ 320 (362)
T d1umda_ 241 VVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAE 320 (362)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999985689789971334335787655202220014667773299899999999987999999999999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 V~~a~~~A~~~p~P~~~~l~~~VY~~~~~~l~~q~~~~~~~~ 362 (362)
T d1umda_ 321 LERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL 362 (362)
T ss_dssp HHHHHHHHHHTCBCCGGGGGTTSSSSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999999998679989899971315799963999999999559
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=100.00 E-value=0 Score=27259.93 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~ 80 (362)
T d2pl5a1 1 GSIGIIETKYAEFKELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKS 80 (362)
T ss_dssp CCCCBCCCEEEEESCEECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSS
T ss_pred CCCCCEEEEEEECCCEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCC
T ss_conf 97673666688518756689887689569999630338889988998788776321155677667883358884599976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 lDt~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~ 160 (362)
T d2pl5a1 81 FDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSI 160 (362)
T ss_dssp EETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHH
T ss_conf 47553579962335676666675420012345557677520168899999999997186726777403577889999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~ 240 (362)
T d2pl5a1 161 AYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPR 240 (362)
T ss_dssp HSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCS
T ss_pred HCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
T ss_conf 48367664001346533677799999999999844974236875667836799999999999870926666563333444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~ 320 (362)
T d2pl5a1 241 GNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVK 320 (362)
T ss_dssp SCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
T ss_conf 55442067799999998988874078778999986311146333225999996189988999857552759999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~p~ 362 (362)
T d2pl5a1 321 SLEAADKRVFYVELQSGEGHDSFLLKNPKQIEILKGFLENPN 362 (362)
T ss_dssp HHHHTTCCEEEEEECCCBSSGGGGSCCHHHHHHHHHHHHCCC
T ss_pred HHHHCCCCEEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCCC
T ss_conf 997579976999948999742105488999999999973999
|
| >d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27258.84 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~~e~~~~~~G~~~~~~~G~~lp~et~e~~~~~dail~Gai 80 (362)
T d1vlca_ 1 KIHHHHHHMKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSV 80 (362)
T ss_dssp CCCCCCSEEEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 97768985799998988667999999999999998762997899998457899997789787899999999789871577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 g~p~~~~~~~~~~~~~~~~~~lR~~ldlyanvRP~r~~~~~~~~~~~~~~~~~~~iD~vivREnteg~Y~g~~~~~~~~~ 160 (362)
T d1vlca_ 81 GGPKWDDLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEK 160 (362)
T ss_dssp CCGGGTTSCSTTSHHHHTHHHHHHHTTCCEEEEEEECCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEECSSC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 79986543213477665578899974433220026753034566666555667772379850124675557777788856
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~t~~~~~Riar~Af~~A~~~~k~Vt~v~K~Nv~~~~~lf~~~~~eva~~yp~I~~~~~~vD~~~~~lv~~P~~f 240 (362)
T d1vlca_ 161 GFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLYSSMLWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQF 240 (362)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCC
T ss_conf 99989943478789999999998618980799943775201589999999999667986999730989999998665777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 dViv~~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~~fE~~HGSApdiaGk~iaNP~a~ils~ammL~~~lg~~~~A~~i 320 (362)
T d1vlca_ 241 DVILTTNMFGDILSDESAALPGSLGLLPSASFGDKNLYEPAGGSAPDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKI 320 (362)
T ss_dssp SEEEECHHHHHHHHHHHTTSSSCGGGCEEEEESSSEEEEESSCCCTTTTTTTCSCCHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 58985306666777899998513332101210422323125686201058986480999999999987346986999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
+
T Consensus 321 ~~Av~~~l~~G~~T~Dlg~~~~~~~~T~e~~dav~~~l~~l~ 362 (362)
T d1vlca_ 321 ERAVELVIEEGYRTRDIAEDPEKAVSTSQMGDLICKKLEEIW 362 (362)
T ss_dssp HHHHHHHHHTTCCCGGGCSSGGGCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 999999998599570004699997769999999999999759
|
| >d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Inosine monophosphate dehydrogenase (IMPDH) family: Inosine monophosphate dehydrogenase (IMPDH) domain: Inosine monophosphate dehydrogenase (IMPDH) species: Tritrichomonas foetus [TaxId: 5724]
Probab=100.00 E-value=0 Score=27258.67 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~e~~ltFdDVlLvP~~Sti~s~r~dVdl~~~l~~~~~~~~~~i~l~iPIIsAnMDTVt~~~mA~~la~~Gglgvih 80 (362)
T d1pvna1 1 AKYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIF 80 (362)
T ss_dssp CEECSSCBCCGGGEEECCCCBCTTCCGGGCBCCEECSCEETTSCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEEC
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEE
T ss_conf 95456788785566983798767777101360268774024556663569847846888768999999999888977995
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 R~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ag~d~i~IDvAhG~~~~v~~~i~~ir~~~~~~~~IiAGNV 160 (362)
T d1pvna1 81 GSQSIESQAAMVHAVKNFRYLVGAGINTRDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNI 160 (362)
T ss_dssp CSSCHHHHHHHHHHHHTCCCCCEEEECSSSHHHHHHHHHHHTCSEEEECCSCCCBHHHHHHHHHHHHHHGGGSCEEEEEE
T ss_pred ECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHCCCHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 05999999998642332023221211013567777777641854775300001015788999999886533103421244
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 aT~e~~~~L~~aGaD~vkVGIG~Gs~CTTr~~tGvG~Pq~sAv~e~a~~~~~~~~~~~~~v~iiaDGGi~~~gdi~KAla 240 (362)
T d1pvna1 161 VDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA 240 (362)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHTCBCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEE
T ss_conf 67889999997297579844303434343655503771677999999999875332036875353323474662357888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~GAd~VM~G~~lAg~~Espg~~~~~~g~~~k~~~Gm~S~~a~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~l~g 320 (362)
T d1pvna1 241 MGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLN 320 (362)
T ss_dssp TTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSTTTCCGGGGCSSSCSSCSSCCBCEEEEECCBCHHHHHHHHHH
T ss_pred EECCCEEEHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 71340021115405565577310103513666622531213322212446521036899737996268777889999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 glrs~~~y~G~~~l~~~~~~~~f~~~t~~~~~E~~~H~~~~~ 362 (362)
T d1pvna1 321 KVKSTMCNCGALTIPQLQSKAKITLVSSVSIVEGGAHDVIVK 362 (362)
T ss_dssp HHHHHHHHTTCSBHHHHHHHCEEEEBCHHHHHHHSCCSSEEC
T ss_pred HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEEC
T ss_conf 999987532767599997488999988210211568826739
|
| >d3thia_ c.94.1.1 (A:) Thiaminase I {Paenibacillus thiaminolyticus [TaxId: 49283]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: Thiaminase I species: Paenibacillus thiaminolyticus [TaxId: 49283]
Probab=100.00 E-value=0 Score=27258.09 Aligned_cols=1 Identities=0% Similarity=-1.688 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~tl~~~~~~~~p~~~~~~~~~~~~F~~~~P~V~v~~~~~~~~~~~~~~~pDv~~~~~~~~~~~~~~g~l~~L~~~~~~~~ 80 (362)
T d3thia_ 1 ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQA 80 (362)
T ss_dssp CEEEEECCSCSSCHHHHHHHHHHHHHHHCTTSEEEECCCCTTTCCCCTTCCEEEEEGGGHHHHHHTTCEECBCGGGCTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf 98999966788867999999999999988193899996652544489989699989088999998898233871011110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~dG~~y~vP~~~~~~~~~ynkd~~~~aG~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (362)
T d3thia_ 81 EDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASM 160 (362)
T ss_dssp GGBCHHHHHHTEETTEECCEEEEEECEEEEEETTCHHHHTCCBHHHHHHHHCCCCCCCSSCCEEEEEEECCCSHHHHHHH
T ss_pred CHHHHHHHHCEEECCEEEEEEEECCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
T ss_conf 01113344311569979997651210799961468997389999973789999999751257887246305877526889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~a~~~~~~~~~~~~~~ 240 (362)
T d3thia_ 161 YLEALIDVTGQYTEYDLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGD 240 (362)
T ss_dssp HHHHHHHHHTCCCCCSSCCCSSSCCHHHHHHHHHHHHHHCHHHHHCCCTTCCTTHHHHHHHHTBEEEEEEETTHHHHHGG
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECHHHHHHHHH
T ss_conf 99999861885113677633443679999999999997304775334466770122111005818999916587655543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~P~~~~~~~~~~~~~~~~i~~~s~~~e~A~~fi~fl~s~e~~~~~~~~~g~~~~~~~~~pa~~~~~e~~~~ 320 (362)
T d3thia_ 241 YAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQ 320 (362)
T ss_dssp GGGTEEEECCBSCSSCCCCEEEEEEEEEETTCSCHHHHHHHHHHHHSHHHHHHHHSCCSTTCCCCCCEESBHHHHHHHTT
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 06766546415787789875450231101676479999999999719999999998468876742445057999863310
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~e~lg 362 (362)
T d3thia_ 321 DYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG 362 (362)
T ss_dssp TCTHHHHHHHHHTCTTCEECCCCTTHHHHHHHHTTTHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 398699999999987688761799999999999999998609
|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Probab=100.00 E-value=0 Score=27257.63 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (362)
T d1v8ka_ 1 PNWEFARMIKEFRVTMECSPLTVTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQ 80 (362)
T ss_dssp CCHHHHHHHHHHHHHHTCCTTTTTCTTSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCE
T ss_conf 96689999999986413489877888888888999980899968863799469998899189981886444655676860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~f~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~ 160 (362)
T d1v8ka_ 81 AFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQ 160 (362)
T ss_dssp EEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTS
T ss_pred EEECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHC
T ss_conf 67678661999998999999999999998741681388632578888603330577876555687133115567777630
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~S 240 (362)
T d1v8ka_ 161 PRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNS 240 (362)
T ss_dssp HHHHTTCCEEEEEEEEEETTEEEETTTTTEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CC
T ss_pred CCCCCCCHHHEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 12346323311021463277487634577544322124577465898899946889989987414545430245674567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 SRSH~i~~i~i~~~~~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~l 320 (362)
T d1v8ka_ 241 SRSHACFQILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQV 320 (362)
T ss_dssp CSSEEEEEEEEESSSSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 51005799999855600136765202566554444453156553332211107789999999856999688746888886
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 LkdsllGgns~t~~i~~vsp~~~~~~eTl~TL~fa~rak~It 362 (362)
T d1v8ka_ 321 LRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 362 (362)
T ss_dssp TTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 133047998619999996987010899999999999974379
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=0 Score=27257.45 Aligned_cols=1 Identities=100% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~i~~~~~~~~~~g~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 1 SDLNNAIQGILDDHVARGVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp CHHHHHHHHHHHHHHTTTCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCC
T ss_conf 95789999999999775997289999999999999857882056698799998697115689999999999997699877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 dd~v~~ylp~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~llg~ii 160 (362)
T d2drwa1 81 DEPITRWFPDLPKAAQMPVRILLNHRSGLPDFETSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYVLAGMII 160 (362)
T ss_dssp TSBGGGTCTTSTTGGGCBGGGGTTTCSCCCCCTTTSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCHH
T ss_conf 76664420354434332335555326899764332223332321026777766406766532201102454311043022
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 e~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d2drwa1 161 AHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDSTEWFPLSGANA 240 (362)
T ss_dssp HHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGGGBCCCEEECBTTCCSCSSBCTTCCCCBTTEEECTTTSCHHHHGG
T ss_pred HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32057526666678888502876523357311454533310211556555643233345676566334621134445566
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 aGgl~sta~Dla~~~~~ll~~~~l~~~~~~~~~~~~~~~~~~~~~~~~yG~G~~~~~~~~~~~~gH~G~~~G~~s~~~~~ 320 (362)
T d2drwa1 241 AGDMVSTPRDIVKFLNALFDGRILDQKRLWEMKDNIKPAFFPGSNTVANGHGLLLMRYGSSELKGHLGQIPGHTSIMGRD 320 (362)
T ss_dssp GTCEEECHHHHHHHHHHHHTTSSSCHHHHHHHHTSCEECCCTTSCEEEECSSCEEEEETTEEEEEEEEEETTEEEEEEEC
T ss_pred CCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCEEEEEEE
T ss_conf 57527189999999999847997899999999974256535799888704369998459941898246578823999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
+
T Consensus 321 p~~~~~iv~l~N~~~~~~~~~~~~~~~~~~~~il~ai~~~~~ 362 (362)
T d2drwa1 321 EETGAALMLIQNSGAGDFESFYLKGVNEPVDRVLEAIKNSRS 362 (362)
T ss_dssp TTTCCEEEEEESEECSSTTSHHHHTTHHHHHHHHHHHHHHTC
T ss_pred ECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 879989999994999556899999999999999999975649
|
| >d1nqka_ c.1.16.4 (A:) Alkanesulfonate monooxygenase SsuD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Ssud-like monoxygenases domain: Alkanesulfonate monooxygenase SsuD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27257.35 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~AE~lGfd~~w~~eh~~~~dp~~~la~la~~T~rI~lgt~V~~ 80 (362)
T d1nqka_ 1 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRP 80 (362)
T ss_dssp CCBEEEEECCTTCEESSTTSSTTEECCCHHHHHHHHHHHHHHTCSEEEECCSTTSCCHHHHHHTTSTTCSSCEEEEEECT
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECC
T ss_conf 92479997456899887888888788999999999999998499999968888888899999999997490699999739
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~P~~~A~~~AtLd~lS~GR~~lGlG~G~~~~e~~~~g~~~~~~~~~~~~~E~~~ilr~l~~~e~v~~~G~~~~~~~~ 160 (362)
T d1nqka_ 81 SVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGA 160 (362)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHTCCCCTTHHHHHHHHHHHHHHHHTTTCCEEEECSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 98986999999999999749985268863666888852122220245566678989999875025664554124652587
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~p~~~p~ppi~~a~~~p~~~~~Aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~~~~~~~ 240 (362)
T d1nqka_ 161 KLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAW 240 (362)
T ss_dssp CCSSCCSSSSSSCEEEECSSHHHHHHHHHHCSEEEEECCCHHHHHHHHHHHHHHHHTTTCCCEEEEEEEEEEESSHHHHH
T ss_pred CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHH
T ss_conf 54234478997016874265789998874265512458999999999999999999709975242343699944689999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~V~e~L~~~~ 320 (362)
T d1nqka_ 241 QAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYA 320 (362)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHSCC-----------------CTTEEETTEEGGGGSSSSSCSCEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
T ss_conf 98765665430889999986542012100466776530340144433467767777506888708858999999999999
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~G~d~~~l~~~~~~~~l~~f~eeV~P~l~~~~~~~~~~~~~ 362 (362)
T d1nqka_ 321 ALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIPEIPQPQPL 362 (362)
T ss_dssp TTTCCEEEEECSSHHHHHHHHHHHTGGGSCBCCCCCCCCCCC
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 729998999489998999999998999870135067899998
|
| >d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Extended AAA-ATPase domain domain: Papillomavirus large T antigen helicase domain species: Simian virus 40 [TaxId: 10633]
Probab=100.00 E-value=0 Score=27257.25 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~q~~~~~l~e~a~~~~~~d~~lll~~y~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~nA~~fl~~~~Q~k~~k~~~~~v~ 80 (362)
T d1svma_ 1 KQVSWKLVTEYAMETKCDDVLLLLGMYLEFQYSFEMCLKCIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL 80 (362)
T ss_dssp CCCCHHHHHHHHHHTTCCCHHHHHHHHHGGGSCSTTCHHHHTTCCHHHHTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97428888988987589739999999998712518889999877789999999860669999873106899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~kr~~~~~ms~~e~i~~~~~~~~~~~p~~~~~~~~~d~~~~~~il~~l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 160 (362)
T d1svma_ 81 AKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFK 160 (362)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTSTTCCCCHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 99997312699899999999999853863334544467888999999998644325899999999998289976769998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l~~~~dg~~ 240 (362)
T d1svma_ 161 GPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSV 240 (362)
T ss_dssp CSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTTHHHHHCSS
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCCC
T ss_conf 99998889999999998599789997742011888875777799899999876541068997288750731134568860
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~p~i~ttN~~~~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~~~l~~~~~~L~~li~~~s~ 320 (362)
T d1svma_ 241 KVNLEKKHLNKRTQIFPPGIVTMNEYSVPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPV 320 (362)
T ss_dssp CEEECCSSSCCEEECCCCEEEEECSCCCCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHTTCTTCHHHHHHHHHHHSCG
T ss_pred HHHHHHHHHCHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCH
T ss_conf 13444210024553167724650654300122466736886268974789999999984035788888999987368987
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~Gk~ile 362 (362)
T d1svma_ 321 AEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGIGVLD 362 (362)
T ss_dssp GGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999987524149999999999976997779
|
| >d2gjxa1 c.1.8.6 (A:167-528) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase A species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27256.15 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 f~~RG~mlD~aR~~~~~~~lk~~id~ma~~K~N~lhlHltD~~~~r~e~~~~p~l~~~ga~~~~~~~yT~~d~~elv~yA 80 (362)
T d2gjxa1 1 FPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYA 80 (362)
T ss_dssp CSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98558677638888089999999999998299389999874787600147873144337868878863899999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~rgI~vIPEiD~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lF~~~~iHiGgDE~~~ 160 (362)
T d2gjxa1 81 RLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGSEPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDF 160 (362)
T ss_dssp HHTTCEEEEECCCSSSCTTTTTTSTTCEEEEESSSSEEEEEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEECCCCSCCS
T ss_pred HHCCCEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 97598798536665046899874833137665788877755665777377899899999999885146537740540124
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~w~~~p~~~~~~~~~g~~~~~~~l~~~f~~~~~~~l~~~gk~~i~W~d~~~~~~~l~~d~ii~~W~~~~~~~~~~~~~~ 240 (362)
T d2gjxa1 161 TCWKSNPEIQDFMRKKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIQPDTIIQVWREDIPVNYMKELEL 240 (362)
T ss_dssp HHHHHCHHHHHHHHHHTCTTCSHHHHHHHHHHHHHHHHTTTCEEEEEHHHHHTTCCCCTTCEEEECCSSSSSCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 43336878899998617788999999999999999999739706744410256777899872564314543668989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~G~~~i~s~~~yl~~~~~g~~w~~~y~~~p~~~~~~~~~~~~ilG~e~~lW~E~i~~~~l~~~~~PRl~A~AE~~Ws 320 (362)
T d2gjxa1 241 VTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEACMWGEYVDNTNLVPRLWPRAGAVAERLWS 320 (362)
T ss_dssp HHHTTCEEEECTTCCTTSCBSSCTHHHHHHCCTTCSSCCHHHHTTEEEEEEEECTTSCSTTTHHHHHTTHHHHHHHHHHS
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 97579859981674256567777656545531036766865650550347770107778510688899799999999859
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~d~~~f~~Rl~~~~~rL~~~Gi~~~p~~~~~c~~~~~~ 362 (362)
T d2gjxa1 321 NKLTSDLTFAYERLSHFRCELLRRGVQAQPLNVGFCEQEFEQ 362 (362)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHHTTCCCCCSSSCCCSSCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
T ss_conf 987889999999999999999977998769998645420329
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=27255.78 Aligned_cols=1 Identities=0% Similarity=-1.291 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~ 80 (362)
T d1q8ya_ 1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 80 (362)
T ss_dssp CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCC
T ss_conf 97888888844785799899750778189999999999799999983431336899999999998401455555422767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~ 160 (362)
T d1q8ya_ 81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 160 (362)
T ss_dssp TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred CEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE
T ss_conf 64789987631256520234320003542000001223467868999999999999988876405864656770570563
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~ 240 (362)
T d1q8ya_ 161 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 240 (362)
T ss_dssp EEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 05765644305675314421234454223665210571321466777643201237899999878899898755432102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rp 320 (362)
T d1q8ya_ 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 320 (362)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCC
T ss_conf 68999999983799878862453220001320122024323577644421000156743589999999998779945790
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ta~e~L~Hp~f~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 362 (362)
T d1q8ya_ 321 DAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWFEEVR 362 (362)
T ss_dssp CHHHHHTCGGGTTCTTCTTCCCTTSCTTCBSTTSTTSSSCCC
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf 899996693407898744477998666788899984354409
|
| >d1qjwa_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Trichoderma reesei, Cel6a [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: Glycosyl hydrolases family 6, cellulases family: Glycosyl hydrolases family 6, cellulases domain: Cellobiohydrolase II (Cel6) species: Trichoderma reesei, Cel6a [TaxId: 51453]
Probab=100.00 E-value=0 Score=27254.50 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~gNPf~g~~~yvnP~y~a~v~~~a~~~~~~~~~~~~~~ia~~Pta~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (362)
T d1qjwa_ 1 ATYSGNPFVGVTPWANAYYASEVSSLAIPSLTGAMATAAAAVAKVPSFMWLDTLDKTPLMEQTLADIRTANKNGGNYAGQ 80 (362)
T ss_dssp CCCSSCTTTTSEECCCHHHHHHHHHHTGGGCCHHHHHHHHHHTTSCCCEEECSGGGHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 97678998897331473058899998751368788999999846780698237788740689999999998726887228
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 lV~Y~iP~RDC~a~ss~G~~~~~~~g~~~Yk~Yid~Ia~~~~~~~~~~~vvIlEPDsL~nlvt~~~~~~c~~~~~~~~~~ 160 (362)
T d1qjwa_ 81 FVVFDLPDRDCAALASNGEYSIADGGVAKYKNYIDTIRQIVVEYSDIRTLLVIEPDSLANLVTNLGTPKCANAQSAYLEC 160 (362)
T ss_dssp EEECCCTTCSTTCSTTCCSCCGGGTHHHHHHHHHHHHHHHHHHTTTSCEEEEECSSSHHHHHHCTTSHHHHTTHHHHHHH
T ss_pred EEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99936999971444249986656554688999999999999856897439997776066654057844457789999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~yAv~~L~~pnv~vYlDaGhsgWlgw~~n~~~~a~~~a~~l~~ag~~~~~rGFatNVSNy~~~~~~~~~~~t~~n~~~~ 240 (362)
T d1qjwa_ 161 INYAVTQLNLPNVAMYLDAGHAGWLGWPANQDPAAQLFANVYKNASSPRALRGLATNVANYNGWNITSPPSYTQGNAVYN 240 (362)
T ss_dssp HHHHHHHTCCTTEEEEEECCCTTTTCSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESTTSCCCSSCSSCCGGGTTCSCCS
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999970899748999788776678743214789999999984667542327898556887766677765445675514
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 e~~Y~~~l~~~l~~~G~~~~~fVIDTsRNG~gp~~~~~~g~WCNp~G~glG~~Pt~~t~~~~vDA~lWIK~PGESDG~~~ 320 (362)
T d1qjwa_ 241 EKLYIHAIGPLLANHGWSNAFFITDQGRSGKQPTGQQQWGDWCNVIGTGFGIRPSANTGDSLLDSFVWVKPGGECDGTSD 320 (362)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEECTTCSSSSCSCSSTTCCSSBSSCCCCSCCBSCCCCTTEEEEECCSCTTBCSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 89999999999985368899989857888999988767888879999847899988999876016898578826777888
Q ss_pred -----------------------------------------C
Q ss_conf -----------------------------------------8
Q 001738 683 -----------------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~D~~c~~~~a~~~aP~AG~Wf~~~f~~Lv~nA~P~~~ 362 (362)
T d1qjwa_ 321 SSAPRFDSHCALPDALQPAPQAGAWFQAYFVQLLTNANPSFL 362 (362)
T ss_dssp TTSTTCCGGGGSTTBCSSCCSTTSBCHHHHHHHHHTCSSCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 888777766676567899897777479999999972689779
|
| >d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiamin diphosphate-binding fold (THDP-binding) superfamily: Thiamin diphosphate-binding fold (THDP-binding) family: Branched-chain alpha-keto acid dehydrogenase PP module domain: E1-beta subunit of pyruvate dehydrogenase (PP module) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27185.95 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~lske~ll~~yr~M~~~R~~e~~~~~l~~~g~i~g~~h~~~GqEa~~vg~~~~l~ 80 (361)
T d2ozla1 1 FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 80 (361)
T ss_dssp CCSEEEEECCCCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 98876565353302015779988788899999999999999999999999999779875065687877999999998679
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~D~~~~~yR~~~~~la~G~~~~~~~ae~~gk~~g~~~G~~~~~h~~~~~~~~~~~ivg~~~p~A~G~A~a~k~~~~~~v 160 (361)
T d2ozla1 81 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEV 160 (361)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBTTBCCCCCSTTTHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCEECCCCCCHHEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
T ss_conf 55785144444210223104610223312687565566554400123466667645445655157899997654058976
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~GDGa~~eG~f~Ealn~A~~~~lPvifv~eNN~yaist~~~~~~~~~~~~~~~~~~~~~~vdGnD~~av~~a~~~A 240 (361)
T d2ozla1 161 CLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFA 240 (361)
T ss_dssp EEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 99972688766763236555554326765899986786667770110354220001365415996267705799999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~R~g~gP~liE~~TyR~~gHs~~D~~~~YR~~~Ei~~~~~k~DPi~~~~~~Li~~g~~se~e~~~i~~ei~~~V~~A 320 (361)
T d2ozla1 241 AAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDA 320 (361)
T ss_dssp HHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99986069888999865568887666652124777888744413899999999999879999999999999999999999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~A~~sp~P~~~~l~~~VYa~~~p~~~~~~~~~~~~~~~~ 361 (361)
T d2ozla1 321 AQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIKFKSVS 361 (361)
T ss_dssp HHHHHHSCCCCGGGTTCSSSSSCCCEEEECSBTTCEEEECC
T ss_pred HHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 99998588969899973216899807877689996116789
|
| >d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Deoxyhypusine synthase, DHS domain: Deoxyhypusine synthase, DHS species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27184.11 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~p~~a~~~v~~~s~~~p~~~~~V~g~df~~~~~~~~ll~~~~~~GFqA~~Lg~A~~i~~~Mi~~~~~~~~~~~~~~~~~~ 80 (361)
T d1dhsa_ 1 APAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLT 80 (361)
T ss_dssp CCHHHHHHHSCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC-----------
T ss_pred CCHHHHHCCEECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 95045424341678899999744178778998999999999873930788999999999998752257765422222234
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~ctIfLt~agam~saGlr~~i~~LIr~g~Vd~IVtTga~lehDi~~~~g~~y~g~f~~dd~~Lr~~ginRIgd 160 (361)
T d1dhsa_ 81 QSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGN 160 (361)
T ss_dssp ------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTEEEETT
T ss_pred CHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 00125666438986144411465799999999859977898068850399999808641076568848876437651220
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 v~Ipee~~~~~e~~i~~il~~~~~e~~~~~~~~~~~e~i~~lg~~i~~~~Sil~~A~~~~vPVf~Pa~~DssiG~~l~~~ 240 (361)
T d1dhsa_ 161 LLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFH 240 (361)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
T ss_conf 63177999999999999999999985404776464999999974268952499999982997654776516699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~iD~~~D~~~l~~~~~~~~~~G~i~iGGGvpKh~i~~~~l~r~g~dyavqItta~~~dGslSGA~p~EaiSWG 320 (361)
T d1dhsa_ 241 SYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWG 320 (361)
T ss_dssp HHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCTHHHHHHHHHHHTTTSBSEEEEECCCCSTTCCSTTCCHHHHHHHT
T ss_pred HHCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 96189953559999999999987466762699959826378776455317998799970799986766689833013057
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 Ki~~~a~~v~V~~DATIv~PLl~a~~~~k~~~~~~~~~~~~ 361 (361)
T d1dhsa_ 321 KIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMHEKNED 361 (361)
T ss_dssp SBCTTCCCEEECSCHHHHHHHHHHHTGGGGHHHHHHHTTCC
T ss_pred CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 61789883799960779999999999975401124322489
|
| >d1x1ia1 a.102.3.2 (A:26-386) Xanthan lyase {Bacillus sp. gl1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Chondroitin AC/alginate lyase family: Hyaluronate lyase-like catalytic, N-terminal domain domain: Xanthan lyase species: Bacillus sp. gl1 [TaxId: 84635]
Probab=100.00 E-value=0 Score=27182.71 Aligned_cols=1 Identities=100% Similarity=0.769 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 sdd~~~lr~rw~~~l~g~~~~d~~d~~~~~~l~~l~~~A~~~~~~~~~~~~~~~lW~~l~~~~~~~~l~~~~~rl~~mA~ 80 (361)
T d1x1ia1 1 SDEFDALRIKWATLLTGGPALDPADSDIAARTDKLAQDANDYWEDMDLSSSRTYIWYALRGNGTSDNVNAVYERLRTMAL 80 (361)
T ss_dssp CCHHHHHHHHHHHHHHCCTTCCTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCSCSSGGGCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 91899999999999708876786768999999999999997787458887766767888766630479999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Ay~~pgs~ly~d~~l~~~I~~al~~~~~~~y~~~~~~~~~NWW~~eIg~P~~l~~~liLl~d~l~~~~~~~~~~~i~~f~ 160 (361)
T d1x1ia1 81 AATTVGSSLYGNADLKEDILDALDWLYVNSYNSTRSRSAYNWWHWQLGIPMSLNDIAVLLYDDISAARMATYMDTIDYFT 160 (361)
T ss_dssp HHHSTTCTTTTCHHHHHHHHHHHHHHHHHTSSTTSCTTSSSHHHHHTHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHC
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 98299985538999999999999999971888888998999125551757999999998514169999999998999857
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 p~~~~TGaN~~d~a~~~~~rglL~~d~~~~~~a~~~i~~~~~~~~v~~gdG~~~DgSf~qH~~~~Y~G~YG~~~l~~~~~ 240 (361)
T d1x1ia1 161 PSIGLTGAARAWQAIVVGVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFVQHTTFAYTGGYGSSVLETTAN 240 (361)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSTTSSSCCSSSSEECTTSCEEETTTEECTTTHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCEECCCCEECCCCEECCCCCHHHHHHHHHH
T ss_conf 89886530788789999999998469999999999976401305526888651478634257710167533999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~l~gT~~~~~~~~~~~l~~~i~~g~~~~i~~g~~~~~v~GR~ISR~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~ 320 (361)
T d1x1ia1 241 LMYLLSGSTWSVSDPNQSNVWQWIYEAYRPLLYKGAMMDMVRGREISRSYAQDHAVGHGIVASIVRLAQFAPAPHAAAFK 320 (361)
T ss_dssp HHHHHTTSTTCCCCGGGGHHHHHHHHTTGGGEETTEECGGGSGGGGGCTTCCHHHHHHHHHHHHHHHTTTCCTTHHHHHH
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99997799887887899999999996002574377016657764014788654457999999999987229999999999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~k~~~~~d~~~~~~~~~~~~~~~~~~~ll~d~~i~~~~~ 361 (361)
T d1x1ia1 321 QIAKRVIQEDTFSSFYGDVSTDTIRLAKAIVDDPSIAPAAA 361 (361)
T ss_dssp HHHHHHHHHCCSSCGGGGSCHHHHHHHHHHHTCTTCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999986076654235887889999999856898897879
|
| >d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=100.00 E-value=0 Score=27182.53 Aligned_cols=1 Identities=100% Similarity=-0.360 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ 80 (361)
T d2c0ra1 1 SERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQF 80 (361)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
T ss_conf 99873357988188899999999987632146865434576898999999999999999968999878999788725999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~tg~~~~~~~i~~ 160 (361)
T d2c0ra1 81 AMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKA 160 (361)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEECCEEEE
T ss_conf 99985255689823898404111125555430374012102343333415555542046761489972464125115777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~al~~vDavss~g~~~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d2c0ra1 161 FPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPP 240 (361)
T ss_dssp CCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30468841899860333320234334325897413345245673799876876627443223324120003331014664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~~~G 320 (361)
T d2c0ra1 241 SFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTT
T ss_pred CEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20230115677766502424777789999998756665404654345777431454399997898546999999999788
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 I~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~~ 361 (361)
T d2c0ra1 321 FVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG 361 (361)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred CEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 88736988678698870688999999999999999999659
|
| >d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: 2-aminoethylphosphonate transaminase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=0 Score=27182.49 Aligned_cols=1 Identities=0% Similarity=-0.627 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~l~~pGP~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~ 80 (361)
T d1m32a_ 1 YLLLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVL 80 (361)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 95036999877799999851544698868999999999999999829899988999889789999999998654224653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~ 160 (361)
T d1m32a_ 81 IVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTY 160 (361)
T ss_dssp EEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEE
T ss_pred EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 01101223457777655301233222234678640256899874247662699843002342011234442211452146
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~vDa~qs~G~~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (361)
T d1m32a_ 161 IVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP 240 (361)
T ss_dssp EEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
T ss_conf 75200256745532233445268763034533799866789625554100024566432200111011234566678777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~g 320 (361)
T d1m32a_ 241 THTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQG 320 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC
T ss_conf 10446899999999985003566788899887777777622875467856649967999899988779999999999889
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 i~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L~~~ 361 (361)
T d1m32a_ 321 FVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYWT 361 (361)
T ss_dssp EECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred CEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 28978986889989984788899999999999999975999
|
| >d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Nucleotidylyl transferase family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain domain: Methionyl-tRNA synthetase (MetRS) species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=27179.78 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~v~~~~P~p~G~lHiGH~~~~~i~~Dil~R~~r~~G~~V~~v~g~D~~g~~i~~~A~~~g~~~~~~~~~~~~~~~~ 80 (361)
T d1rqga2 1 MVRYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKI 80 (361)
T ss_dssp CCEEEEEECCCBTTSCCBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
T ss_conf 96599944898889873456445629999999999981599267158537650999999998299999999999986000
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~~~~~ 160 (361)
T d1rqga2 81 TFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFAICGRPISFRDSAHYYIKMQDF 160 (361)
T ss_dssp HHHHHTCCCSEEEETTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEBTTTTBCCCGGGTTTCCBCEEEEEEEEEECGGGT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCHH
T ss_conf 00001222233544566002344553443101368533124664100022011033213589954310263478750113
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~d~~isr~~~wg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 240 (361)
T d1rqga2 161 AERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKP 240 (361)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHHHHHTTCCCCEECEECCSSSCBCSCCCSSSTTCEECHHHHGGGHHHHHHHHHHHHTTCT
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCH
T ss_conf 54432101335433210345542002023333333346435667654346788278750345546564566676667733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~G~KMSKSlGN~I~~ 320 (361)
T d1rqga2 241 NEWKKYWLNIDGQTRVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWV 320 (361)
T ss_dssp TTTHHHHBCSSCCEEEEEEEEGGGHHHHHTHHHHHHHTTCCBCSSSCCBCBCCCSBCCEECCEEETTEECBTTTTBSCBH
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCCCCCCCCH
T ss_conf 57777654016886348734655533100148999998632565542014778978897023975898668779988788
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 ~d~i~~yg~D~lR~~l~~~~p~~~d~dfs~~~~~~~~n~~~ 361 (361)
T d1rqga2 321 HEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEEL 361 (361)
T ss_dssp HHHTTTSCHHHHHHHHHHTCCSSSCEEECHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 99998868089999999608888999889999999864589
|
| >d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Homocysteine S-methyltransferase family: Homocysteine S-methyltransferase domain: Betaine-homocysteine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27179.36 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~llerL~~~~ililDGgmGteL~~rG~~~~~~Ws~~~~l~~Pe~V~~iH~~yi~AGAdiI~TNTy~a~~~~l~~~g~~~ 80 (361)
T d1lt7a_ 1 KGILERLNAGEIVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYV 80 (361)
T ss_dssp CCHHHHHHTTCCEECCTTHHHHHHHHTC-------------CHHHHHHHHHHHHHHTCSEEEEEC---------------
T ss_pred CHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCHHH
T ss_conf 95889862699799978889999977999899988688852959999999999996799998278857879998613266
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~aa~~~a~~~~~~~~~~VaGsigp~~~~~~~~~~~~~~~~~~~q~~~l~~~gvD~il~ETm~~~~Ea~~a 160 (361)
T d1lt7a_ 81 LEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWA 160 (361)
T ss_dssp --------CHHHHHHHHHHHHHTTTCEEEEEECCCHHHHTTCCHHHHHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 78899999999999998510244321010256678631121104788999999899887504322336777568999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~a~~~~~~Pv~~s~t~~~~g~l~~g~~~e~~~~~~~~~~~~~g~nc~~~p~~~~~~i~~l~~~~~~~~~~~~~~~~p~~ 240 (361)
T d1lt7a_ 161 VETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 240 (361)
T ss_dssp HHHHGGGSSCEEEEECCBTTBSTTSCCHHHHHHHHHHTTCSEEEEESSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCS
T ss_pred HHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 99986036608898787178863677849999988730620555214554676899999999765541455135404652
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~pn~~~~~~~~~p~~~~~~~~~~~~~~~~~~~a~~~~~~Ga~iIGGCCGttP~HI~~la~~l~~~~~~~~p~~~~~~~ 320 (361)
T d1lt7a_ 241 YHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGS 320 (361)
T ss_dssp BCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHTHHHHSSCCC-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 33778776566789887687665647999999999999987990999898798999999999985145899998888877
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 361 (361)
T d1lt7a_ 321 WGSGLDMHTKPWVRARARKEYWENLRIASGRPYNPSMSKPD 361 (361)
T ss_dssp -------------CTTSCHHHHHHCCCCCSCTTSCSCCCCC
T ss_pred CCCCEECCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 36776426875015446599998626678998881024898
|
| >d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Modulator in mal gene expression, MalY species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27177.58 Aligned_cols=1 Identities=0% Similarity=-1.357 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~ 80 (361)
T d1d2fa_ 1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE 80 (361)
T ss_dssp CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 92738789799998999999999985788899899898999999999999838999802599908889999987653111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~ 160 (361)
T d1d2fa_ 81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD 160 (361)
T ss_dssp TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 23223233334520368998503437861133332223322211021003677416873044432233320234343200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
T d1d2fa_ 161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP 240 (361)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 11332200010234332323333456532222233333334454444445420034132267888876510223466510
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~ 320 (361)
T d1d2fa_ 241 SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVA 320 (361)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEE
T ss_conf 01247889987503411210133322036778888765310223355567415999983589999999999999869999
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr 361 (361)
T d1d2fa_ 321 IMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 361 (361)
T ss_dssp CEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98360018899987999971899999999999999999619
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=0 Score=27177.45 Aligned_cols=1 Identities=0% Similarity=-0.957 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 97999888767999999999977997899984798644277787653168847998657898999999975799999989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 60166666775999999999999999999999841222101468549999344101177866775434567887566889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEECEEHHHHH
T ss_conf 99999899999999999999999968989999138568929985769999999997499817947999689078899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~ 320 (361)
T d1kewa_ 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPL 320 (361)
T ss_dssp HHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHCCCCC
T ss_conf 99999985698899699899997534777767653001233445676543255689999875531578999998799889
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~l~e~i~~ti~w~~~n~~~~~~~k~~~~~~~~~~~y~~~~ 361 (361)
T d1kewa_ 321 ETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGRQ 361 (361)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHSCCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 89999999999999986998887661778999998515699
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=100.00 E-value=0 Score=27174.69 Aligned_cols=1 Identities=0% Similarity=-0.294 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~q~f~w~~~~~~~~~~gi~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd 80 (361)
T d1mxga2 1 AKYLELEEGGVIMQAFYWDVPGGGIWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVE 80 (361)
T ss_dssp CCSSCGGGTCCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSS
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 93124455887999452687887855999999789999649998996957407999889998865665567543456778
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~Gt~~d~~~LV~~aH~~GikVIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (361)
T d1mxga2 81 TRFGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTANYLDFHPNELHCCDEGTFG 160 (361)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCCCEEEEETTTTEEEEEECTTCTTCCSCCCGGGBSSSSSCSCCSCCCT
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78899999999999999779979998603255577656577666556545665567888766555676666554223456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~giDGfR~Daa~~v~~~f~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~ 240 (361)
T d1mxga2 161 GFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKGYGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGA 240 (361)
T ss_dssp TSCBBCTTSHHHHHHHTSSTTSHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHCCCEEECCCCSCHHHHHHHHHHHTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCC
T ss_conf 76423677605689999999987655441687604505421199999987775168733256346788998655532688
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~df~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~R~~~~~~a~a~llt~pGiP~iyYGd~~~~ 320 (361)
T d1mxga2 241 KVFDFPLYYKMDEAFDNNNIPALVYALQNGQTVVSRDPFKAVTFVANHDTDIIWNKYPAYAFILTYEGQPVIFYRDFEEW 320 (361)
T ss_dssp EEECHHHHHHHHHHHTTTCHHHHHHHHHTTCSSTTTCTTTEEEESCCSSCCCCSCHHHHHHHHHHSSSEEEEEHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 43041589999999944983789999862521025798781336736678010158999999982899017885897566
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~d~~~f~R~gd~~~ 361 (361)
T d1mxga2 321 LNKDKLINLIWIHDHLAGGSTTIVYYDNDELIFVRNGDSRR 361 (361)
T ss_dssp SCHHHHHHHHHHHHHTCCSCEEEEEECSSEEEEEECCCSSC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCC
T ss_conf 77079999999999716798478987799899996788889
|
| >d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectate lyase-like domain: Pectate lyase species: Erwinia chrysanthemi, type A [TaxId: 556]
Probab=100.00 E-value=0 Score=27174.27 Aligned_cols=1 Identities=0% Similarity=0.968 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~s~~~~G~a~~~ggttGG~gg~~g~v~~Vt~l~dL~~al~~~~~p~iI~v~G~I~~~~~~~~~~~~~~~~~ 80 (361)
T d1pe9a_ 1 AELVSDKALESAPTVGWASQNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CCCCCTTTTCCCCSSSGGGSSSCCCTTTTCCGGGEEEECSHHHHHHHHTTTTSCEEEEECSEEETTTTCCCCSHHHHHHH
T ss_pred CCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 95212111322477634351799876888848779996999999998747997089998549978887443332220223
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~i~v~sn~TI~G~g~~~~i~~~gl~i~~~~~~~NVIiRnl~ir~~~~~~~~~~~~~~~~~~~Dai~i~~~s~~VwIDH~ 160 (361)
T d1pe9a_ 81 SQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHV 160 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESC
T ss_pred CEEEECCCCEEEEECCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECC
T ss_conf 15871898579870688489621699850366426999827865575577765668775667873687517743999852
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 s~s~~~~~~~~~~~~~~~~~~~~Dg~~di~~~s~~vTiS~~~f~~h~~~~l~G~~d~~~~~d~g~~~vT~hhN~~~~~~~ 240 (361)
T d1pe9a_ 161 TISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTE 240 (361)
T ss_dssp EEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEE
T ss_pred EECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 74058766533345567630541025875057431373387546877623735677776555786259997854268757
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 R~P~~r~G~~Hv~NNy~~n~~~~~~~~~~y~~~~~~~a~il~E~NyF~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~ 320 (361)
T d1pe9a_ 241 RAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDNGSVLNGSA 320 (361)
T ss_dssp CSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGEEESSCCEEEEESCEETTEE
T ss_pred CCCCEECCEEEEECCEEECCCCCCCCCCCEEEECCCCCEEEEECEEEECCCCCCCCCCCEEECCCCCEEECCCEEECCCC
T ss_conf 68873076489989665368676430001565057887799985088899987553220012178877955882520741
Q ss_pred ----------------------------------------C
Q ss_conf ----------------------------------------8
Q 001738 683 ----------------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~py~y~~~~~a~~v~~~V~~~AGaGkl 361 (361)
T d1pe9a_ 321 VDLSGCGFSAYTSKIPYIYDVQPMTTELAQSITDNAGSGKL 361 (361)
T ss_dssp CCCTTSSCBCCCSCCCSCCCCCCCCHHHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 23368765555667875210456257788988744798879
|
| >d1qo5a_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Human (Homo sapiens), liver isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Human (Homo sapiens), liver isozyme [TaxId: 9606]
Probab=100.00 E-value=0 Score=27110.06 Aligned_cols=1 Identities=0% Similarity=0.371 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~e~~~eL~~~a~~~~~~GKGiLAaDeS~gT~~Krl~~igventeenr~~yR~~l~tt~~~~~~~IsGvILfe 80 (360)
T d1qo5a_ 1 AHRFPALTQEQKKELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFH 80 (360)
T ss_dssp CCSSCSSCHHHHHHHHHHHHHHSTTSCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTSCGGGGGTEEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCEEEEECCH
T ss_conf 99877689999999999999981489879982689983777898769999779999998888518703435656898369
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 eTl~q~~~~g~~~~~ll~~kGIvPgIKVDkGl~~l~~~~ge~~t~gLdgL~~Rl~~y~~~Ga~faKwRaVi~i~~~~ps~ 160 (360)
T d1qo5a_ 81 ETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSS 160 (360)
T ss_dssp TGGGCBCTTSCBHHHHHHHTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCH
T ss_pred HHHHHHCCCCCCHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH
T ss_conf 99841423677466899865963578348750007667765335662018899999986474445212200245577745
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vt~~vl~~l~~~l~~~~V~LeG~lLKpnMv~pG~~~~ 240 (360)
T d1qo5a_ 161 LAIQENANALARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACT 240 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCBCCCCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999999999999999971976431433245788746889999999999999887652134678742001025511055
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~va~~Tv~~l~~~vp~~VpgIvfLSGGqS~eeAt~~LnamN~~~~~~pW~lsfSygRALQ~s~Lk~W~g~~~n~ 320 (360)
T d1qo5a_ 241 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANK 320 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHSCTTCCEEEEBCTTCCHHHHHHHHHHHHHCSSCCCSEEEEEESGGGTHHHHHHHTTCGGGH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHH
T ss_conf 55787888899887764303667871001688744888999999986157899976899643756189999857881428
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~~aQ~~~~~ra~~Ns~A~~G~y~~~~~~~~~~~~~lfva~ 360 (360)
T d1qo5a_ 321 EATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTAC 360 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCSCCCHHHHSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
T ss_conf 9999999999986068756740788887865443003139
|
| >d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Chorismate synthase, AroC superfamily: Chorismate synthase, AroC family: Chorismate synthase, AroC domain: Chorismate synthase, AroC species: Campylobacter jejuni [TaxId: 197]
Probab=100.00 E-value=0 Score=27109.71 Aligned_cols=1 Identities=0% Similarity=-1.555 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 mntfG~~~r~tt~GESHG~~lg~vidG~PaGl~i~~e~I~~~L~RR~pg~~~~t~R~E~D~veilSGv~~G~TtG~PI~~ 80 (360)
T d1sq1a_ 1 MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAI 80 (360)
T ss_dssp CCEECSSSEEEEECCGGGSCEEEEEECCCSSCBCCHHHHHHHHHHTTC-----------CCEEECSSEETTEECSSCEEE
T ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCEEEE
T ss_conf 98775523898525578884489993409588609999999996179999889867888717992263689876750078
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~I~N~d~~s~dy~~~~~~pRPGHAD~~~~~KYg~~D~RgggRsSaReTa~rVaaGaiAk~lL~~~gI~v~s~v~~IG~~~ 160 (360)
T d1sq1a_ 81 VVFNENAHSKDYDNLKDLFRPAHADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV 160 (360)
T ss_dssp EEC----------------------------------------CCCTHHHHHHHHHHHHHHHHTTTCEEEEEEEEETTEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEE
T ss_conf 88716787310466623678750777876553985776887515999999999999999999862100666788996661
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~s~vrc~d~~~~~~m~~~I~~ak~~gDSvGG~ve~~~~gvP~GLG~p~fdkLda~LA~A~mSIpAv 240 (360)
T d1sq1a_ 161 SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGEVLYDKLDSKLAHALMGINAV 240 (360)
T ss_dssp CCSCGGGSCHHHHHHSTTCBSCTTTHHHHHHHHHHHHHTTCCCCEEEEEEEESCCBSCSBTTTBCHHHHHHHHHHTSTTE
T ss_pred CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEECCCCCHHHHHHHHCCCCC
T ss_conf 47776646877732573347546778999999999854578763189999846997648601365135888777336310
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 KGVE~G~Gf~~a~~~GSe~nD~~~~~~~~tN~~GGi~GGiSnG~pi~~rva~KP~sSi~k~q~TVd~~~~~~~~~~~gRh 320 (360)
T d1sq1a_ 241 KAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGILGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLKFELKGRH 320 (360)
T ss_dssp EEEEETTGGGGGGSCHHHHCCCCSSSSCSCCTTCSEETTEEBSSCEEEEEEECCCC---------------------CCS
T ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 01530565565420066462222136644456786000235888628999978875567753222178988788557877
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 Dpc~vprA~~V~Eam~a~vlad~~L~~~~~~~~~~~~~~g 360 (360)
T d1sq1a_ 321 DPCVGVRGSVVASAMVRLVLADCLLLNASANLNNLKNAYG 360 (360)
T ss_dssp CSCTHHHHHHHHHHHHHHHHHHHHHHTGGGSHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 8707165049999999999999999845779999875449
|
| >d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Pentein, beta/alpha-propeller superfamily: Pentein family: Amidinotransferase domain: L-arginine: glycine amidinotransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27106.46 Aligned_cols=1 Identities=0% Similarity=-0.926 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~vn~~sE~~~Lk~VivGr~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ea~ee~d~l~~~Le~~GV~V~r 80 (360)
T d1jdwa_ 1 CPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRR 80 (360)
T ss_dssp CCCBBCBSSSCEEEEEECBCTTCBCCCCCHHHHTTSCGGGHHHHHHHTTSBSCHHHHHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99722767463739999517767799976221347856665542332146455999999999999999999876967861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 p~~~~~~~~~~~~~~~~~~~~~~~~RD~~~~ig~~~i~~~~~~~~r~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (360)
T d1jdwa_ 81 PDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELY 160 (360)
T ss_dssp CCCCCTTCEEECSSCEEECCCBCCHHHHEEEEBTEEEECCBSCGGGTTGGGGTHHHHHHHHHTTCEEEECCCCCCCGGGB
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 46233310101000003675545476202663794233333456553524454157887514675304435543345333
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~H 240 (360)
T d1jdwa_ 161 NQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMH 240 (360)
T ss_dssp CTTCCCSSHHHHHHHHHHTCCSBCSSSCCBCGGGEEEETTEEEECCCSSCCHHHHHHHHHHHTTTCEEEECCBSSCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCC
T ss_conf 45544544454321112463254055125425420111652120234422135899998644665311102336733327
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 lD~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~N~LsI~p~~Vi~~~~n~~~~~~L 320 (360)
T d1jdwa_ 241 IDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMF 320 (360)
T ss_dssp STTTEEEEETTEEEECTTSCBTTHHHHHHTTCEEECCCCCCCCTTSCCSSSCGGGGGCCEEEETTEEEEETTCHHHHHHH
T ss_pred CCCEEEEECCCCEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHCCEEEEEEECCCEEEECCCCHHHHHHH
T ss_conf 66226871587189951336355531332585358535223454542153453051589997699999908889999999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~Gi~vi~i~~~e~~~~~GG~~CmT~pl~Reg~~e~y~~ 360 (360)
T d1jdwa_ 321 EKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYLD 360 (360)
T ss_dssp HHTTCEEEEECCHHHHTTTCCTTTTEEEEEESCCCCCSCC
T ss_pred HHCCCEEEEECHHHHHCCCCCCEEECCCEEECCCCCCCCC
T ss_conf 9888989992626543159997384725087786554669
|
| >d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27105.95 Aligned_cols=1 Identities=0% Similarity=-1.025 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a 80 (360)
T d1bjna_ 1 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA 80 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
T ss_conf 93774798858899999999998751024686543457678899999999999999996899997799978826888863
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~~~~i 160 (360)
T d1bjna_ 81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDET 160 (360)
T ss_dssp HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEECCCC
T ss_pred HHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCE
T ss_conf 00102566543330035630344687776417632121012477764035666412577604999655555457652100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~v~vDa~~~~~~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1bjna_ 161 PDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPP 240 (360)
T ss_dssp CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCC
T ss_pred ECCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 01244522565662352424436513305999726665447776267641012211446774112678876532024444
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~~~~~~l~~~Gi 320 (360)
T d1bjna_ 241 TFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGL 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 30278889999988641068999999999999988755335430125774344523999875885249999999997898
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~~~~ 360 (360)
T d1bjna_ 321 HALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG 360 (360)
T ss_dssp ECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 7634877567388983488999999999999999999739
|
| >d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: GABA-aminotransferase-like domain: Phosphoserine aminotransferase, PSAT species: Bacillus alcalophilus [TaxId: 1445]
Probab=100.00 E-value=0 Score=27105.31 Aligned_cols=1 Identities=0% Similarity=-0.293 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~ 80 (360)
T d1w23a_ 1 VKQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
T ss_conf 98436707988488999999999998753046865434576788999999999999999968999878999478489999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~~~i~~ 160 (360)
T d1w23a_ 81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQN 160 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECSS
T ss_pred HHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCEEEEE
T ss_conf 99876411467654155324123334788777640201202444453201112200335553213754881665104432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~g~l~ivDavqs~g~~~id~~~~~vd~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1w23a_ 161 FPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240 (360)
T ss_dssp CCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCC
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 21463036986113453432243565542488504434457765046703434313445774200124543100013331
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~~~~~~~l~~~G 320 (360)
T d1w23a_ 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQG 320 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 20120015778777641004899999999999888887633520036888201640699998599735999999999789
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
-
T Consensus 321 I~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~~~~~ 360 (360)
T d1w23a_ 321 FVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKENA 360 (360)
T ss_dssp EESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 8665077766717899508999999999999999998559
|
| >d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: AF1104-like superfamily: AF1104-like family: AF1104-like domain: Hypothetical protein At2g17340 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=0 Score=27105.25 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~v~~pll~~~~~~~y~~~tv~~~~~~~~~~~~~~~~~~Wl~~f~~~i~~~~~~A~s~~~~~da~~Ra~~f~~~y~~~L~ 80 (360)
T d1xfia_ 1 EMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYAGILE 80 (360)
T ss_dssp CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97566466774213766887788887555221526677999999977889999985089999889999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~l~~~p~~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~lp~~~~~id~i~d~~~~l~~~vr~aiAGNif 160 (360)
T d1xfia_ 81 DLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFAGNIF 160 (360)
T ss_dssp HHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99848765576017889999999999976999800999999999999987999999753016079999999999987764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 D~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~~~~~k~vly~~DNaGe~Vfd~lL~~~rell~~g~~V~ 240 (360)
T d1xfia_ 161 DLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRGAQVV 240 (360)
T ss_dssp ---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEE
T ss_pred HCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 30220021444046426999999854589753669999998735775407999358734999887899999965898499
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLVI~KGMGr~~~ 320 (360)
T d1xfia_ 241 LAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIE 320 (360)
T ss_dssp EEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEEEEESHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHCCCEEEECCCCCHHH
T ss_conf 99888752336249999999998751205765202135189657999887185768999999983699999828751132
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V~k~~~~ 360 (360)
T d1xfia_ 321 TNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV 360 (360)
T ss_dssp BSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC
T ss_pred CCCHHHCCCCEEHHHHHCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 0101322788103334258999999499611279982479
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=100.00 E-value=0 Score=27103.99 Aligned_cols=1 Identities=0% Similarity=-0.128 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~yDV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~~~~r~~~l~~~~~~~L~~lGl~~~i~~~~~~~ 80 (360)
T d1pn0a1 1 TKYSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDM 80 (360)
T ss_dssp CCEEEEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCC
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 99888788989989598999999998705332489868998689998868859998989999999869838999626776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~dg~~s 160 (360)
T d1pn0a1 81 STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAY 160 (360)
T ss_dssp CEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCC
T ss_conf 31599722667741112455543333344320253188999999999986165411356732563688638999605776
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T d1pn0a1 161 PVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMI 240 (360)
T ss_dssp CEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCE
T ss_pred CEEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
T ss_conf 35999998404566542331113787058866327765512456865302368888777631754332001011221110
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~grv~LvGDAAH~~~P~~GqG~n~al~Da~~La~~l~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~s~~~~~~ 320 (360)
T d1pn0a1 241 VTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRL 320 (360)
T ss_dssp ECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14444646928983675432050457887520889999999888876589738999999999999999999999999998
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~G~~~~y~~ 360 (360)
T d1pn0a1 321 FSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDE 360 (360)
T ss_dssp HHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCC
T ss_conf 7799368888860335587899999865554330766688
|
| >d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FabD/lysophospholipase-like superfamily: FabD/lysophospholipase-like family: Patatin domain: Patatin species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
Probab=100.00 E-value=0 Score=27100.87 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~v~iLsldGGG~rG~~~~~vL~~L~~~~~~~~~~~~~~~~d~fD~i~GTS~Gaiia~~la~g~~~~~~~~~~~~~~~ 80 (360)
T d1oxwa_ 1 LGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVP 80 (360)
T ss_dssp CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 99700899989878999999999999997497234667997142099999963999999999869970318999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~f~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 160 (360)
T d1oxwa_ 81 FYFEHGPQIFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDIS 160 (360)
T ss_dssp HHHHHHHHHTCCCCCSSSCSCCCHHHHHHHHHHHTTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGGCCBHHHHH
T ss_pred HHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99861210100123346764546999999999958701332167532673015888748973644356886322698861
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~ASsA~P~~F~p~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~l~~~~~~~~~~~~~~~~~~~~~s~gtg~~~ 240 (360)
T d1oxwa_ 161 YSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTS 240 (360)
T ss_dssp HHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTCCGGGEEEEEECCCCBC
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 15513887778779732247787326774033542256726778999987624675322245677663155314666664
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~R~~~~~~~~~~~~lDd~s~~~l~~l~~ 320 (360)
T d1oxwa_ 241 EFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQ 320 (360)
T ss_dssp TTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGGGGCTTCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 33333212442001167689999999876559999999999987447988479974886656541146899999999999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
-
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~L~~~~~~L~~er~~r~~~~ 360 (360)
T d1oxwa_ 321 VGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRANKA 360 (360)
T ss_dssp HHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999996330343066799999999999999998763059
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=27100.33 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 t~YD~IIVGsG~aG~v~A~rLae~g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (360)
T d1kdga1 1 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKDI 80 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCTTBCTTB
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 95778998968899999999801879699998168987666543454422215764246763212211488755478655
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~G~~lGGsS~in~~~~~r~~~~D~~~~~gwp~~~~~l~py~~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 160 (360)
T d1kdga1 81 TVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQG 160 (360)
T ss_dssp SSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCHHHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCHHCCCCCCCCCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 43101220111011333112244022100246653333013444333202332110037886344422589999999853
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~G~R~s~~~~yl~~a~~r~nl~i~t~~~V~rI~~d~~ra~GV~~~~~~~~~~~~~ 240 (360)
T d1kdga1 161 YNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFI 240 (360)
T ss_dssp CEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEE
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCCEEE
T ss_conf 16787455788544321000120135322322211356664266300104867999997299899999985236762489
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~v~a~~eVILsAGai~SP~LLl~SGIGp~~~L~~~gi~p~v~~~l~~~~~~~~~p~g~~~~~~~~~~~v~~~~~~~~g~~ 320 (360)
T d1kdga1 241 PVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVDSNVKVFGTN 320 (360)
T ss_dssp EEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTCBCSCTTTCSBCTTCBBTTCS
T ss_pred EEEECCEEEEECHHHHCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEECCCCEEECCC
T ss_conf 99979999993656747299986589955666775328643445546453133663200017897562777531463368
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~~~a~~~p~~~~~~~~~~~~~~ae~aa~~il~~~~~~ 360 (360)
T d1kdga1 321 NLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 360 (360)
T ss_dssp SEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 8368854036545789977556588999998875204899
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=0 Score=27102.17 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~W~~~w~~~a~~~~~~a~~~~~~g~~~~A~~~~~~A~~~~~~a~~~~~ 80 (360)
T d2jbwa1 1 KPEDEMDNWGRLILDGVSYSDMVGARDRPKEITWFDYWMSLANEYEQEAERKVALGHDLSAGELLMSAALCAQYAQFLWF 80 (360)
T ss_dssp CHHHHHCCHHHHHHHTCCHHHHHHHHTCCTTSCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 92658888776761797589998630689942799999999999999999999769987899999999999997356557
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~ 160 (360)
T d2jbwa1 81 DERRQKGQARKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMA 160 (360)
T ss_dssp STHHHHHHHHHHHHHHHHGGGSSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 93677899999999999986479873996357677666239993699999529999379876477899999999966998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pri~a~V~~~~~~~~~~ 240 (360)
T d2jbwa1 161 TATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDY 240 (360)
T ss_dssp EEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCSTT
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHH
T ss_conf 99971642223576555656699999999999996600155553423331050999987515987554999746555777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g 320 (360)
T d2jbwa1 241 WDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDG 320 (360)
T ss_dssp GGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSSSCTHHHHHHHHHSCGGGEEEEEETTC
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 75433456677777506873577889877406645467527999899972999928999999999657998599997999
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~H~~~~~~~~~~~~i~dWl~~~L~~g~~~apt~~~~p~~~ 360 (360)
T d2jbwa1 321 DHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKGWPLEH 360 (360)
T ss_dssp CGGGGGGTTHHHHHHHHHHHHHHTSSCCCCCCEESCSCC-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 9677767579999999999998314897899877788889
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=0 Score=27103.27 Aligned_cols=1 Identities=200% Similarity=1.865 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 1 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred CCCHHHCCCCCCCCCCEEEEEECCEEEEEECCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEE
T ss_conf 98601005146889999999989969999899994899169998888999899999999992899899999899994887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~ 160 (360)
T d1k32a3 81 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 160 (360)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred EECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCC
T ss_conf 50897127741211454321000111110000012221000000135520230121322566521233121100025654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 240 (360)
T d1k32a3 161 IHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 240 (360)
T ss_dssp EEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGG
T ss_pred EEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCC
T ss_conf 26630455713530354322110012577999999959985575333544023203641179852469601206877767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~v~~~ 320 (360)
T d1k32a3 241 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDL 320 (360)
T ss_dssp SCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred CCCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEE
T ss_conf 15531136526654001012476752675413898569999735997069996489987999979997498864886879
Q ss_pred ---------------------------------------C
Q ss_conf ---------------------------------------8
Q 001738 683 ---------------------------------------V 683 (1019)
Q Consensus 683 ---------------------------------------~ 683 (1019)
.
T Consensus 321 ~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~~ 360 (360)
T d1k32a3 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360 (360)
T ss_dssp EECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCEE
T ss_pred EECCCCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCC
T ss_conf 9999898999997899499999999985459984162259
|
| >d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein {Prosthecochloris aestuarii, strain 2k [TaxId: 1102]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Bacteriochlorophyll A protein superfamily: Bacteriochlorophyll A protein family: Bacteriochlorophyll A protein domain: Bacteriochlorophyll A protein species: Prosthecochloris aestuarii, strain 2k [TaxId: 1102]
Probab=100.00 E-value=0 Score=27037.56 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 tTtA~~Dyeiileggssswg~vk~rakvNVP~a~pllp~dc~iKi~~Kpl~~~kgvVR~t~~ieSiVDstknkl~vE~DI 80 (359)
T d4bcla_ 1 TTTAHSDYEIILEGGSSSWGQVKGRAKVNVPAAIPLLPTDCNIRIDAKPLDAQKGVVRFTTKIESVVDSVKNTLNVEVDI 80 (359)
T ss_dssp CCEEEEEEEEEECCTTCCCEEEEEEEEECSCCCCSSCCEEEEEEEEEEECC---CCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEHHHHHHHCCEEEEEEEE
T ss_conf 94212334789707876531023567603898777766666227620205776786999864045776401404899862
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ANEtkdrRiavGEG~vsVGdFSH~FsfEGsVvnl~YyRsdavrrNvpnp~ymqGrqfHDi~mkVPldn~dlIdTWe~~~~ 160 (359)
T d4bcla_ 81 ANETKDRRIAVGEGSLSVGDFSHSFSFEGSVVNMYYYRSDAVRRNIPNPIYMQGRQFHDILMKVPLDNNDLVDTWEGFQQ 160 (359)
T ss_dssp EESSSSEEEEEEEEEEEETTEEEEEEEEEEEEEEESCCCHHHHTTCSSCCCCCEEEEEEEEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCEEEECCCEEEEEEEEEEEEEEEECCHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHHHHHHH
T ss_conf 35787640673243387602224578620488999950146763599865552731100478558995568899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 a~~~~~~nF~dwIrdfWfIGPa~~al~egGQ~is~I~v~~~~~e~g~k~pvgv~rwrfsh~gsgivdsisrw~elfp~d~ 240 (359)
T d4bcla_ 161 SISGGGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGGEKGPVGVTRWKFSHAGSGVVDSISRWTELFPVEQ 240 (359)
T ss_dssp HC---CCSHHHHHHHHHSTTTHHHHHHHTTEEECCCEEEEEEEECC---CEEEEEEEEEEEESSCCHHHHTTTTTCCGGG
T ss_pred HHHCCCCCHHHHHHHHEEECHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHH
T ss_conf 87538974566556514522778888752730330799741025688787553267863787510226777887477634
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~~pa~ieg~frsdsqgievkvdg~lpgvsvdaggg~rrilnhpliplvHHGmvgk~n~f~vd~q~kv~lPkGyK~ryaA 320 (359)
T d4bcla_ 241 LNKPASIEGGFRSDSQGIEVKVDGNLPGVSRDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDTQLKIVLPKGYKIRYAA 320 (359)
T ss_dssp CSSCEEEEEEEEECSSCEEEEEEEEETTSEEEEETTEEEECCCCHHHHHHHTTTTTSSCCEEEEEEEEECCTTCEEEEEE
T ss_pred CCCCCEECCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHCCCCCCEEECCCEECCCCCCEEEEEEEECCCCCEEEECC
T ss_conf 39850441454456774489982456860442788722441688620031230312577613368999726871676516
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 pqf~sqn~eey~wsGG~Ya~W~EhvCKGg~gqF~ilyaq 359 (359)
T d4bcla_ 321 PQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ 359 (359)
T ss_dssp SCCSEEETTEEEEESHHHHHHHHHHHTTCCCCCEEEEEC
T ss_pred CHHHHCCHHHEEECCCHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 301001254368637147888875414887754788429
|
| >d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: FMN-linked oxidoreductases family: FMN-linked oxidoreductases domain: Glycolate oxidase species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=100.00 E-value=0 Score=27033.34 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~i~d~~~~A~~~lp~~~~~y~~gga~~~~t~~~N~~~Fd~i~l~pr~L~d~~~iDlst~~lG~~~~~P~~IspMtg 80 (359)
T d1goxa_ 1 MEITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAM 80 (359)
T ss_dssp CCCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSC
T ss_pred CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCC
T ss_conf 95467999999999868888889870567741999999999984626331246887798755678835578615265323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 g~~~~~~~e~~lA~aA~~~gi~~~~~s~s~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~vd~~~ 160 (359)
T d1goxa_ 81 QKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 160 (359)
T ss_dssp GGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 46677864787656688629722334554565023677469984112222106778999999888754033442224102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~kg~~~~~da~~ 240 (359)
T d1goxa_ 161 LGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARL 240 (359)
T ss_dssp CCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 22344412442357853314566553036676556411799998513788999999999861566532200244688899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~~~g~~~~~vsnhggr~ld~~~~~~~~l~~i~~~~~~~~~iiadGGIR~G~Di~KALaLGAd~vgigrp~L~~la~~g~ 320 (359)
T d1goxa_ 241 AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 320 (359)
T ss_dssp HHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHH
T ss_pred HHHCCCCCEECCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCH
T ss_conf 98706653220321110000000025445566503478621465057575778999998489989876899999984349
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 ~gv~~~i~~l~~EL~~~M~l~G~~~i~~L~~~~l~~~~~ 359 (359)
T d1goxa_ 321 AGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCC
T ss_conf 999999999999999999985899978959954657899
|
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=0 Score=27030.00 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~~~~~~~IADlGCS~G~Ntl~~v~~iI~~i~~~ 80 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98417603379998533999999999999998999999999624677899865999727899965799999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~pe~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHWLS~vP~~l~ 160 (359)
T d1m6ex_ 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIE 160 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCC
T ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCC
T ss_conf 98638999972899847888526799998463012678875898657722320178874577642003344303885445
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~dmv~eG 240 (359)
T d1m6ex_ 161 SNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEG 240 (359)
T ss_dssp CCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 78886797479998999999999999999999999998357857999985567898888863518999999999999859
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 lI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~~a~~~RA~~e~~l~~hf 320 (359)
T d1m6ex_ 241 LIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHF 320 (359)
T ss_dssp CSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98899997316842668889999885148975655447654154201223444565889999999999999999999985
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 g~~i~D~lF~r~~~~v~~~~~~~~~~~~~~~~sL~rK~~ 359 (359)
T d1m6ex_ 321 GEAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRKSD 359 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCC
T ss_conf 828899999999999996076549953999999996689
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=0 Score=27028.64 Aligned_cols=1 Identities=0% Similarity=-0.725 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~gPL~girVld~~~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i 80 (359)
T d1x74a1 1 AGPLSGLRVVELAGIGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAMLRNRRIVTADLKSDQGLELALKLIAKADVLI 80 (359)
T ss_dssp CCTTTTCEEEEECCSTHHHHHHHHHHHTTCEEEEEECC-----CCCCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEE
T ss_conf 98999989998278308999999999839979998999999813456651898599972859899999999986689988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~n~~pg~~~~lgl~~~~l~~~nP~lI~~sisgfG~~Gp~~~~~~~D~~~qA~sG~~~~~g~~~~~P~~~~~~~~d~~~g~ 160 (359)
T d1x74a1 81 EGYRPGVTERLGLGPEECAKVNDRLIYARMTGWGQTGPRSQQAGHDINYISLNGILHAIGRGDERPVPPLNLVGDFGGGS 160 (359)
T ss_dssp ECSCTTHHHHHTCSHHHHHHHCTTCEEEEEESSCSSSTTTTSCCCHHHHHHHTSTGGGSSCTTSCCCCCTTCCCCCCTTH
T ss_pred ECCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHH
T ss_conf 66888736541898788776347816999968988898666565654455556622212789999878732189876799
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~aa~ailaAL~~R~~tG~Gq~VdvSl~ea~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~y~t~DG~~i~~~~~~ 240 (359)
T d1x74a1 161 MFLLVGILAALWERQSSGKGQVVDAAMVDGSSVLIQMMWAMRATGMWTDTRGANMLDGGAPYYDTYECADGRYVAVGAIE 240 (359)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEEEEEEHHHHHHHHTHHHHHHHHTTSCCSSTTCSTTTTCSTTEEEEECTTSCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECC
T ss_conf 99999999999999856997486311167788877799999980798865688867666765476254788368996277
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~l~~d~~~~~~~~~~~~~~el~~~l~~~~~~~t~~e~~~~l~~~gvp~~pV~~~~ev~~dpq~~~r~~~~~ 320 (359)
T d1x74a1 241 PQFYAAMLAGLGLDAAELPPQNDRARWPELRALLTEAFASHDRDHWGAVFANSDACVTPVLAFGEVHNEPHIIERNTFYE 320 (359)
T ss_dssp HHHHHHHHHHHTCCGGGSCCTTCGGGHHHHHHHHHHHHHTSCHHHHHHHTSSSSSCEEECCCHHHHTTCHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCHHHHHHCCEEE
T ss_conf 78777654121201344321101444688899998776666489999999767970895289999874978897199998
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~p~~s~tp~~~~~~P~lGeht~eIL~e~lG 359 (359)
T d1x74a1 321 ANGGWQPMPAPRFSRTASSQPRPPAATIDIEAVLTDWDG 359 (359)
T ss_dssp CSSSEEECCSSEESSSCCCCCCCCCCCCCHHHHHHHHTC
T ss_pred ECCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 689114578878899998899999999789999997279
|
| >d1yvra1 a.118.25.1 (A:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TROVE domain-like family: TROVE domain-like domain: 60-kda SS-aARo ribonucleoprotein species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Probab=100.00 E-value=0 Score=27028.51 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~q~~p~~~~qv~N~aGg~a~~~~~~~~L~rfl~~Gt~~~tyY~~~~~l~~e~~~~l~~l~~~~~~~~~v~~l~~~~~~g 80 (359)
T d1yvra1 1 MDQTQPLNEKQVPNSEGCYVWQVSDMNRLRRFLCFGSEGGTYYIEEKKLGQENAEALLRLIEDGKGCEVVQEIKTFSQEG 80 (359)
T ss_dssp CCTTSCSSTTCEECTTSCEEEECCHHHHHHHHHHHCCTTCCSSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 98777698211556667720369989999999961368986745826526889999999997278278999999998437
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~r~~p~l~aLal~a~~~d~~~r~~a~~~~~~v~r~~~~L~~fv~~~~~~~~~~~~~~~gr~lrkav~~Wy~~~~~~~L 160 (359)
T d1yvra1 81 RAAKQEPTLFALAVCSQCSDIKTKQAAFRAVPEVCRIPTHLFTFIQFKKDLKEGMKCGMWGRALRKAVSDWYNTKDALNL 160 (359)
T ss_dssp CSSCSHHHHHHHHHHHTSSCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
T ss_conf 88784269999999986898889999999999996682189999999998536768786258999999999864998999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 A~~~~Ky~~r~gwShkDlLrl~Hpkp~~~~~~~l~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 240 (359)
T d1yvra1 161 AMAVTKYKQRNGWSHKDLLRLSHIKPANEGLTMVAKYVSKGWKEVQEAYKEKELSPETEKVLKYLEATERVKRTKDELEI 240 (359)
T ss_dssp HHHHTSCCCSSSCCHHHHHHHTTCCCSSHHHHHHHHHHHTCHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99998517778997999999808999847899999999638511111134433660379999999999998715878889
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~lI~~~~Lt~E~~p~~~~~~~~vWeaLi~~mp~~ALLRNL~~l~~~gvl~~~~~~~~~V~~rL~D~~~l~~arihP~~~ 320 (359)
T d1yvra1 241 IHLIDEYRLVREHLLTIHLKSKEIWKSLLQDMPLTALLRNLGKMTADSVLAPASSEVSSVCERLTNEKLLKKARIHPFHI 320 (359)
T ss_dssp HHHHHHHCCCGGGSCTTGGGCHHHHHHHHHTCCHHHHHHHHHHHHHTTTTCTTCHHHHHHHHHHTCHHHHHHTTCCHHHH
T ss_pred HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHH
T ss_conf 99999728989870144316899999998718899999978877452567877278999999847999999725582999
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 L~A~~~Y~~g~~~~~~~~w~p~~~i~~AL~~A~~~sf~~ 359 (359)
T d1yvra1 321 LVALETYKKGHGNRGKLRWIPDTSIVEALDNAFYKSFKL 359 (359)
T ss_dssp HHHHHHHHHCC-----CCCCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999984478666677788599999999999987079
|
| >d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Exodeoxyribonuclease V alpha chain (RecD) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=27027.77 Aligned_cols=1 Identities=0% Similarity=-0.626 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~l~~~~~~~~~r~~d~~fa~~~~~~~~~~~~l~~al~s~~~~~Gh~cl~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1w36d1 1 KLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNW 80 (359)
T ss_dssp CTHHHHHHHHHTTSSCHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHTTCSEEETTTTTTGGGGSSSCCCCSSCCTTCSTH
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHCCCCCHHHH
T ss_conf 96899999998183568999999998558985899999999999839997627999751200244430222155558999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~l~~~~~v~~~~~~~p~vl~~~~lyl~~~~~~E~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~A~~~a 160 (359)
T d1w36d1 81 EECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVA 160 (359)
T ss_dssp HHHHHHSTTEESSSSCCSEEECSSEEEEHHHHHHHHHHHHHHTSCCBCCCCCHHHHHHHHHTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 99987276656777888658778884047899999999999998637799983789999997465765663899999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~~~~~~~~~~~~~t~~ 240 (359)
T d1w36d1 161 LTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLH 240 (359)
T ss_dssp HTBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCCSCCCCSCSCCCBTTT
T ss_pred HCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 70885999768988752169999999999875269828984375999999998887777645810445542013455789
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~~~~~~lILvGD~~QLppV~~G~vl~dl~~~~~~~~ 320 (359)
T d1w36d1 241 RLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGF 320 (359)
T ss_dssp SCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTCCTTCEEEEEECTTSGGGTSTTBCHHHHGGGGTTCC
T ss_pred HHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHCCC
T ss_conf 98763100067777543666541346533214489999999987259998999777221668788818999999773477
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~l~r~~~~~~~~~~~~~~~~i~d~l~~L~knyR 359 (359)
T d1w36d1 321 TAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR 359 (359)
T ss_dssp CHHHHHHHHHHSSSCCCCCSTTTTHHHHTTEEECCCCCC
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHCCCCCCC
T ss_conf 899999999985410001333334202172112545789
|
| >d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=27026.09 Aligned_cols=1 Identities=0% Similarity=0.536 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~K~K~aVLl~n~G~P~s~~dv~~yL~~~~~d~~vi~~P~~~~l~~~i~~~r~~~~~~~Y~~igg~SPL~~~t~~q~~~l~ 80 (359)
T d2hrca1 1 RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRRIGGGSPIKIWTSKQGEGMV 80 (359)
T ss_dssp CCCCEEEEEEECCCCSSGGGHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 99966999974799999789999999974799721163488888887411008899999863899922999999999988
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~L~~~~~~~~~~~v~~amry~~P~i~~~l~~l~~~G~~~iv~lPLyPqyS~sTtgs~~~~~~k~l~~~~~~~~~~~~~i 160 (359)
T d2hrca1 81 KLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTI 160 (359)
T ss_dssp HHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHHTSCCSSEEEEE
T ss_pred HHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 89876347665437998514355305889999985587440010155423412003226899999998541013566434
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~p~yi~a~a~~i~~~~~~~~~~~~~~~~llfS~HglP~~~~~~gdpY~~q~~~t~~~i~~~l~~~~~~~~~fQSr 240 (359)
T d2hrca1 161 DRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQSK 240 (359)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHTTSCGGGTTTCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECC
T ss_conf 67788188999999999999972553357772699961123131454189517889999999998734430333244447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~g~~~Wl~P~~~~~l~~l~~~G~k~v~v~p~gFvsD~lETl~Eidie~~e~~~~~~G~~~~~~vp~lN~~p~fi~~la~l 320 (359)
T d2hrca1 241 VGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADL 320 (359)
T ss_dssp CSSSCBSSSBHHHHHHHHHHTTCCEEEEEECSCSSCCHHHHTTTTTHHHHHSCSSSCCSEEEECCCSTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 79976679858999999997499739998986566534679988899999999975996489827999998999999999
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 v~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 359 (359)
T d2hrca1 321 VHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQQL 359 (359)
T ss_dssp HHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTCCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 999864788777556888999887103888850053779
|
| >d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type B [TaxId: 5061]
Probab=100.00 E-value=0 Score=27024.69 Aligned_cols=1 Identities=0% Similarity=-0.194 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 a~v~g~a~Gfa~~ttGG~~g~v~~Vtt~~eL~~al~~~~PriI~~~gtid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1qcxa_ 1 AGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTTGCAPWGTASQCQVAINLHS 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98776676055688788897489938999999986289974999886681344556322334245554322222325332
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~~~~~~~NVIirnl~ir~~~~~~~~~~Dai~i~~ 160 (359)
T d1qcxa_ 81 WCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDD 160 (359)
T ss_dssp HHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEES
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEECCCEEEEECCCCEEEECEEEECCCCCCCCCCCEEEEEC
T ss_conf 22344556762035530267650784798749851588189746568886784489969098558777787897478617
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 s~nvwIDH~s~s~~~d~~~~~~~~~s~~vTvs~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~vT~hhN~~~~~~~R~P~~ 240 (359)
T d1qcxa_ 161 SDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKV 240 (359)
T ss_dssp CCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEECCCCCCCCEEEECCCCCCEEEECCEECCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 88789982564456887537602677756865307616754101256567787400279861999925615887778606
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~~~~~~~~~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~ 320 (359)
T d1qcxa_ 241 QGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSG 320 (359)
T ss_dssp CSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEECSSCSSEEECCCSHHHHGGGHHHHSSCCCCCEEESCC
T ss_pred CCCCEEEEEEEEEECCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 07844899941796767778824775189998158889887665564320304687554531245556400011335676
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~t~~~a~~v~~~V~~~AG~GK 359 (359)
T d1qcxa_ 321 SMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKNAGQGK 359 (359)
T ss_dssp CCCCBCGGGGGGGTTSCCCCCCCGGGHHHHHHHHSSTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 314688530046677663576899999987775289999
|
| >d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Single-stranded right-handed beta-helix superfamily: Pectin lyase-like family: Pectin lyase domain: Pectin lyase species: Aspergillus niger, type A [TaxId: 5061]
Probab=100.00 E-value=0 Score=27024.12 Aligned_cols=1 Identities=0% Similarity=0.271 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~v~~~a~Gfa~~ttGG~~g~~~~Vtt~~eL~~al~~~~PriI~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (359)
T d1idka_ 1 VGVSGSAEGFAKGVTGGGSATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGTGCAPWGTASACQVAIDQDD 80 (359)
T ss_dssp CCCCSCCCGGGTTCCTTTTCCCBCCCSHHHHHHHHHSSSCEEEEECSEEECTTTTCEEEEEEECTTCSSTTBCEEECGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 97565574144578788897379938999999986289974999863480356644112333234565431101114443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~i~~~~~NVIiRNl~i~~~~~~~~~~~DaI~i~~ 160 (359)
T d1idka_ 81 WCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDD 160 (359)
T ss_dssp HHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECS
T ss_pred CCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEECCCCEEEECCCEEEEECCCEEEEECCEEECCCCCCCCCCCEEEEEC
T ss_conf 22235556763014532167770572799608861588499657468874682199979599568777787887588517
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 s~nVwIDH~s~s~~~d~~~~~~~~~s~~vTis~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vT~hhN~f~~~~~R~P~~ 240 (359)
T d1idka_ 161 CDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV 240 (359)
T ss_dssp CEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEE
T ss_pred CCCEEEEEEEECCCCCCCEEEECCCCCCEEEECEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCEE
T ss_conf 86489980060357788635610578726620406523312234566556687332289862899924981577888401
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 320 (359)
T d1idka_ 241 QDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGEVCSTYLGRDCVINGFGSSGT 320 (359)
T ss_dssp CTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEEEESSEEECCSSTTGGGGGHHHHSSCCCCCEEESSCC
T ss_pred CCCCEEEEECCEEECCCCEEEECCCCEEEEEECEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34305999876997762557835775158996618867767754467723733567777421244476443113354664
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~a~~v~~~V~~nAG~Gkl 359 (359)
T d1idka_ 321 FSEDSTSFLSDFEGKNIASASAYTSVASRVVANAGQGNL 359 (359)
T ss_dssp CCCBCCTTGGGGTTSCCCCCCCGGGHHHHHHHHCSTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 366776521355665545768878977766434898879
|
| >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: Dehydroquinate synthase-like superfamily: Dehydroquinate synthase-like family: Iron-containing alcohol dehydrogenase domain: Alcohol dehydrogenase TM0920 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=27026.39 Aligned_cols=1 Identities=100% Similarity=0.803 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~f~f~~P~~i~fG~g~l~~l~~~~~~~g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~ 80 (359)
T d1o2da_ 1 VWEFYMPTDVFFGEKILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVE 80 (359)
T ss_dssp CCCCCCCCEEEESTTHHHHHGGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHH
T ss_pred CEECCCCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 93737999899948999999999997599589998586888740999999999876984999757468979899987642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse~t~~avi~~~~~~~k~~ 160 (359)
T d1o2da_ 81 RYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTPYSILTDPEGNKRGC 160 (359)
T ss_dssp HHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCCEEEEECTTSCEEEE
T ss_pred HCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHCCCCC
T ss_conf 00135775688516642001899999998489971331167534457787588426455422114214545675500102
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~P~~~i~Dp~l~~~~P~~~~~~~~~Dal~h~~E~~~s~~~~~~~~~~a~~ai~~~~~~l~~~~~~~~~a~~~l~~as 240 (359)
T d1o2da_ 161 TLMFPVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPPSDALAIEAMKIIHRNLPKAIEGNREARKKMFVAS 240 (359)
T ss_dssp ECCCCSEEEECGGGGGGCCHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 35778768860754058534445665317999988876400255156688999999999876532104699999877899
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~g~a~~~~g~g~~Hai~h~l~~~~~i~HG~~~ai~lp~v~~~~~~~~~ek~~~ia~~lg~~~~~~~~~lglp~~lg~~ 320 (359)
T d1o2da_ 241 CLAGMVIAQTGTTLAHALGYPLTTEKGIKHGKATGMVLPFVMEVMKEEIPEKVDTVNHIFGGSLLKFLKELGLYEKVAVS 320 (359)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTTCHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99987551678644410245213303877412578879999999998759999999999889999999985991005979
Q ss_pred --------------------------------------C
Q ss_conf --------------------------------------8
Q 001738 683 --------------------------------------V 683 (1019)
Q Consensus 683 --------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~i~~~~~~a~~~~~~~~np~~~t~e~i~~il~~alg~ 359 (359)
T d1o2da_ 321 SEELEKWVEKGSRAKHLKNTPGTFTPEKIRNIYREALGV 359 (359)
T ss_dssp HHHHHHHHHHHTTCGGGGGSSSCCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 999999999987385021899468999999999987669
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=0 Score=26949.67 Aligned_cols=1 Identities=0% Similarity=-0.127 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~p~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~~~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l 80 (358)
T d2hdsa1 1 APQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEI 80 (358)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 96789999999999999838998699999999999999688602566988999997863045999999999999755986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~llg~iie 160 (358)
T d2hdsa1 81 KLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAV 160 (358)
T ss_dssp CTTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSSCCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHH
T ss_conf 42300010000002321101455665026768980430121222089999876175335898426743541110013231
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~tg~~~~~~~~~~i~~PLgm~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aggl~st~~Dla~f~~~~l~~~~~ 240 (358)
T d2hdsa1 161 KPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDI 240 (358)
T ss_dssp GGGTSCHHHHHHHHTTTTTTCTTEESSCCGGGGGGBCCEEETTEEECCCCCTTHHHHTCCEECHHHHHHHHHHHHCGGGC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCC
T ss_conf 13699821202667775059642527898467315102433686412344545578764623899999999998589987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~G~~~G~~ 320 (358)
T d2hdsa1 241 NEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFG 320 (358)
T ss_dssp SSHHHHHHHHHHTSEEEEETTEEECSSCEEEESSCCTHHHHTSTTSSSSCCCEECEEEEEEECCCSSEEEEEEEEETTEE
T ss_pred CHHHHHHHHHHHHCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
T ss_conf 86888888877632302368766555402035667753234676655211234444556777777850797345267425
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 s~~~~~Pe~~~~ivvltN~~~~~~~~~~~~~~il~al~ 358 (358)
T d2hdsa1 321 SYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ 358 (358)
T ss_dssp EEEEEEGGGTEEEEEEESBCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 89999987997999997799998789999999999759
|
| >d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: D-aminoacylase, catalytic domain domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain species: Alcaligenes faecalis [TaxId: 511]
Probab=100.00 E-value=0 Score=26948.93 Aligned_cols=1 Identities=0% Similarity=-0.957 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 GFID~HtH~D~~~~~~p~~~~~~~~GVTT~v~GncG~s~aP~~~~~~~~~~~~l~~g~~~~w~t~~eyl~~le~~~~~~N 80 (358)
T d1m7ja3 1 GFIDSHTHDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVN 80 (358)
T ss_dssp CEEESSCCCTTHHHHCTTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSE
T ss_pred CCEECCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 92522788845532597986414699764888177777145775442005778504777686789999999973587654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 va~~vgH~~lR~~vmg~~~~~at~~ei~~M~~ll~eal~~GA~G~Stgl~y~P~~~A~~~El~~lak~~~~~g~~~~~h~ 160 (358)
T d1m7ja3 81 AACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHM 160 (358)
T ss_dssp EEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEEC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 03541455554415583023578899999999999999658765235775441035898999999988886098346653
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 r~~~~~~~~~~~e~~~~a~~~g~~~~ish~~~~~~~~~~~~~~~~~~~~~a~~G~~i~~d~yPy~ag~t~l~~~~~~~~~ 240 (358)
T d1m7ja3 161 RDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQDVSLDAYPYVAGSTMLKQDRVLLAG 240 (358)
T ss_dssp SCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHSCEEEEECSCSCEEEECCCCTTTTSS
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 25663178888999999997298657513345777652568999999999863798641215854134522234444133
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~G~~l~eiA~~~g~~p~d~~~dl~~~~~~~~~~~e~~v~~~l~~p~~~igSDgga~~~~~hpr~~gt 320 (358)
T d1m7ja3 241 RTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDERPHPRLWGT 320 (358)
T ss_dssp CEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHH
T ss_pred CHHHHCCCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 30110266676542574999998839987887888742210010589999999983999228767665789958888661
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 f~r~L~~~vRe~~~lsLeeAI~k~T~~pA~~~Gl~dRG 358 (358)
T d1m7ja3 321 FPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGLAERG 358 (358)
T ss_dssp HHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTCTTCS
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999999567881789999999987999983987899
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=0 Score=26947.52 Aligned_cols=1 Identities=100% Similarity=1.500 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~g~l~~~G~~~~d~~G~~~~l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~ 80 (358)
T d1ecea_ 1 AGGGYWHTSGREILDANNVPVRIAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSIN 80 (358)
T ss_dssp CCCSCCEEETTEEECTTSCEECCEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCC
T ss_pred CCCCEEEEECCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCC
T ss_conf 99970996099799999989999987667411345666667724799999999976998899347688746877777755
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~ 160 (358)
T d1ecea_ 81 FYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLH 160 (358)
T ss_dssp CSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECS
T ss_pred CCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 33368111011699999999999997899066401356666888655688277999999999998864476536755320
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y 240 (358)
T d1ecea_ 161 NEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDY 240 (358)
T ss_dssp SCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC
T ss_conf 33456776775413455899999999999850899589996546676665322566430432776678667658986414
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~W~ 320 (358)
T d1ecea_ 241 ATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWS 320 (358)
T ss_dssp CTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCSHHHHHHHHHHHHHTCCHHHHTTSSCEEEESC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 78767753456630356677788889999998459709992678888999869999999999999998540181699973
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 ~k~~~~~~~G~~~~dw~~~~~~~~~~i~~~~~~~~~~~ 358 (358)
T d1ecea_ 321 WNPDSGDTGGILKDDWQTVDTVKDGYLAPIKSSIFDPV 358 (358)
T ss_dssp SCSCCTTTCCSBCTTSSSBCHHHHHHHGGGCCCCCCCC
T ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCC
T ss_conf 77777887640169888878366532030213568989
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=100.00 E-value=0 Score=26947.38 Aligned_cols=1 Identities=0% Similarity=-0.526 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~dpr~dP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~ 80 (358)
T d1jkma_ 1 PGRLGDESSGPRTDPRFSPAMVEALATFGLDAVAAAPPVSASDDLPTVLAAVGASHDGFQAVYDSIALDLPTDRDDVETS 80 (358)
T ss_dssp CHHHHCTTCCTTTCTTSCHHHHHHHHTTTTTSCCCCCSSCTTSCHHHHHHHHHHHHHHHHHHHHHSCCCCTTCCCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 99888987786779998999999997536665677998783315599999987647999988755454269988885079
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~ 160 (358)
T d1jkma_ 81 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPS 160 (358)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTH
T ss_pred EEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCH
T ss_conf 99996789988899999417888898749996387104066542221067888875100133000001246565677733
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 240 (358)
T d1jkma_ 161 GVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSL 240 (358)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHCCCCCCH
T ss_conf 56777888889987232468754034444672679999999976527876542223455211366576411110234210
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~ 320 (358)
T d1jkma_ 241 VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLRDEGIAFARRLARAGVDVAARV 320 (358)
T ss_dssp HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 00234445516666677642775577457300234530110258999899987887787999999999998799589999
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 ~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 358 (358)
T d1jkma_ 321 NIGLVHGADVIFRHWLPAALESTVRDVAGFAADRARLR 358 (358)
T ss_dssp ETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 79896463542466697899999999999999897569
|
| >d1dosa_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class II FBP aldolase domain: Fructose-bisphosphate aldolase (FBP aldolase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26947.38 Aligned_cols=1 Identities=100% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~v~t~~nlk~~L~~A~~~~yAV~AfNv~n~e~~~Aii~AAee~~sPvIlq~s~g~~~y~gg~~~~~~~~~~ 80 (358)
T d1dosa_ 1 SKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQG 80 (358)
T ss_dssp CCGGGTCCSEECCTHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTH
T ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHH
T ss_conf 94663346776757999999999998795699878698999999999999968998999061688770764156668767
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~a~~v~~~a~~~~VPV~lHLDHg~~~~~~~i~~~idag~~~~~~~~~~gfsSVMiDgS~l~~eeNi~~Tk~v 160 (358)
T d1dosa_ 81 AAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKY 160 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 88888898999999999837997899657652146778887788899999982777776556778857789999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ve~Ah~~gv~VEaElG~igg~Edg~~~~~~~~~~~~T~peea~~~~~ef~~~tgvD~LAvaiGt~HG~Yk~~~~~l~p~l 240 (358)
T d1dosa_ 161 LERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTI 240 (358)
T ss_dssp HHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHH
T ss_pred HHHHHHHCCEEEEEEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCCHH
T ss_conf 99985537768984336404567753210102330599899999999876467651565432614553478876677014
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~i~~~~~vp~~~~~LVlHGgSGip~e~i~~ai~~GV~KiNi~Tdlr~a~~~~ir~~~~~n~~~~~~~~~~~~~~ 320 (358)
T d1dosa_ 241 LRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGE 320 (358)
T ss_dssp HHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHHGGGSSSSEEETTEE
T ss_pred HHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
T ss_conf 69999999987289986534120588897688999999819848961719999999999999984846541113675444
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~k~~fDPrk~l~~a~~am~~~v~~~~~~fgs~nkl 358 (358)
T d1dosa_ 321 DQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL 358 (358)
T ss_dssp EEECHHHHCHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 57777767908889999999999999999982897779
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26950.23 Aligned_cols=1 Identities=100% Similarity=1.201 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 dRv~P~C~~f~~CGGC~~qh~~y~~Ql~~K~~~l~~~~~~~~~~v~~~~p~~YR~r~~~~v~~~~~~~~~~~Gf~~~~s~ 80 (358)
T d1uwva2 1 ERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSS 80 (358)
T ss_dssp TBCCCSCTTTTTBTTCSCTTBCHHHHHHHHHHHHHHHHTSCCCEEECCCSSSCBSEEEEEEEEETTTTEEEEEEEBTTSS
T ss_pred CCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC
T ss_conf 98898999999485861008999999999999999862765676657888777415999845765889569989735884
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~iV~i~~C~i~~~~i~~~l~~lr~~l~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (358)
T d1uwva2 81 DIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAP 160 (358)
T ss_dssp CEEECSCCTTBCHHHHHHHHHHHHHHTTCGGGGGEEEEEEEEETTEEEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 06614125145577999999988754033445520399999831880899995266677789999975311363899940
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~g~~~~~~~~g~~~~i~p~sFfQ~N~~~~e~l~~~v~~~~~~~~~~~vlDLycG~G~fsl~La~~~~~V~gv 240 (358)
T d1uwva2 161 DSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGV 240 (358)
T ss_dssp SSSCCEEEECCCCEEEETTEEEECCSSSCCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSSEEEEE
T ss_pred CCEEEEEECCCCEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCCCCEEEEC
T ss_conf 43367762487248960888999877133003303446779889875246788449995366665521003565279822
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 E~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~l~~~~~~~ivYVSCnp~Tl 320 (358)
T d1uwva2 241 EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATL 320 (358)
T ss_dssp ESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 47499999999848755324621342204543234455404675599679973479999999974999899992898998
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 aRDl~~l~~~gy~l~~i~~~D~FP~T~HvE~v~~l~Rv 358 (358)
T d1uwva2 321 ARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRV 358 (358)
T ss_dssp HHHHHHHHHTTCEEEEEEEECCSTTSSCCEEEEEEEC-
T ss_pred HHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEEEC
T ss_conf 87799998779767599997359998618999999969
|
| >d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase A, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26945.06 Aligned_cols=1 Identities=0% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~p~~~~~~~~~~~~~~~~~~~v~~Yy~~W~~y~~~~~~~~I~~~~~THi~YAFa~v~~~~~~~~~~~~~~~~~~ 80 (358)
T d1edqa2 1 TDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQ 80 (358)
T ss_dssp TTCTTSCCCCCCCCTTCCCBCCCSSCEEEEEEEGGGGSTTCCCGGGSCGGGCSEEEEEEECBCCCTTTSGGGGGSTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99754688779778889888789998999995952023899992469986797699950772698874654222333222
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~LK~~~p~lKvllSiGGw~~s~~~~~~a~~~~R~~ 160 (358)
T d1edqa2 81 ALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFMGDKVKRDR 160 (358)
T ss_dssp HHHHHTTTCCTTSBCCSCHHHHHTSCBTTBCSTTCSSCHHHHHHHHHHHHCTTCEEEEEEECSSSCGGGGGTTSHHHHHH
T ss_pred CCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf 22224466777615612714432033467664344344289999999974899769999989987888602358789999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 Fi~svv~~l~~y~~fDGIDIDWEyP~~~g~~~~~~~~~D~~nf~~Ll~eLR~~l~~~~~~~~~~~~ls~a~~~~~~~~~~ 240 (358)
T d1edqa2 161 FVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDK 240 (358)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTSCSSCTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECSHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
T ss_conf 99999999998353786131124323345778778978998999999999999887643317742025650476445413
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~l~~~vD~inlMtYD~~G~w~~~~~g~~t~l~~~~~~~~~~~~v~~~v~~~~~~Gvp~~KlvlGip~YGRs~~~K~ 320 (358)
T d1edqa2 241 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMDARSVQAKG 320 (358)
T ss_dssp SCHHHHGGGCSEEEEECCCSSCTTCSSSCCCSSCSSCCTTCTTCSCCHHHHHHHHHHHTCCGGGEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCHHHHHHHH
T ss_conf 21777863378898860245577787887877888887667877652999999999878998896999685479999887
Q ss_pred -------------------------------------C
Q ss_conf -------------------------------------8
Q 001738 683 -------------------------------------V 683 (1019)
Q Consensus 683 -------------------------------------~ 683 (1019)
.
T Consensus 321 ~y~~~~~lgG~~~W~~~~D~g~ll~a~~~~l~~~~~~~ 358 (358)
T d1edqa2 321 KYVLDKQLGGLFSWEIDADNGDILNSMNASLGNSAGVQ 358 (358)
T ss_dssp HHHHHHTCCEEEEECGGGCCSHHHHHHHHHTTCCBSCC
T ss_pred HHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 78862897439887156786289999998647854679
|
| >d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: Fructose-1,6-bisphosphate aldolase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=100.00 E-value=0 Score=26877.58 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~el~~~a~~~~~~GKGilAADeS~gT~~Krl~~iGventEenr~~~R~~l~tsp~~~~ 80 (357)
T d2qapa1 1 MSRVTVLQSQLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQ 80 (357)
T ss_dssp CCEEEEEGGGSGGGCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGG
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 96121111037775445847899999999998079986998358998277789876999978999999998847987555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~IsGvILfeeTm~q~~~~g~~~~~ll~~kGIVPgIKVDkGl~~~~~G~~~ek~t~gLD~L~~R~~ey~~~Ga~faKwRsV 160 (357)
T d2qapa1 81 YISGVILHDETVGQKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNV 160 (357)
T ss_dssp TEEEEEECHHHHTCBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEEECHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCHHC
T ss_conf 44689812898732302799779999847981544247751478789974642625677999877754233300310100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 i~i~~~~ps~~~I~~na~~laryA~i~q~~GLVPIVEPEVlidg~h~~e~~~~vte~vl~~~~~~l~~~~V~Leg~lLKp 240 (357)
T d2qapa1 161 YKIQNGTVSESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKP 240 (357)
T ss_dssp ECCBTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 43666775044466568999999999997497631051233224564688899999999999998875314445776543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 nMv~~G~~~~~~~~~e~va~~tv~~l~~tvP~~VpgIvfLSGGqS~eeAt~~LnaiN~~~~~~pw~lsfSfsRALQ~s~L 320 (357)
T d2qapa1 241 NMVVPGAESGKTAAPEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSAL 320 (357)
T ss_dssp CCCCCCTTSSCCCCHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
T ss_conf 42224543345688556302356665214797787113147886789999999997424578998589863397608999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 k~W~g~~env~~aQ~~~~~Ra~~ns~A~~G~y~~~~e 357 (357)
T d2qapa1 321 KAWGGKESGLAAGRRAFLHRARMNSMAQLGKYKRSDD 357 (357)
T ss_dssp HHHTTSGGGHHHHHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9857974639999999999999868986688687789
|
| >d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: HD-domain/PDEase-like superfamily: HD-domain/PDEase-like family: PDEase domain: Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26877.57 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~w~Fd~f~l~~~~~~~~L~~~~~~if~~~~l~~~f~i~~~~l~~Fl~~v~~~Y~~~~nPYHN~ 80 (357)
T d1taza_ 1 VGPTYSTAVLNCLKNLDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSFLDALETGYGKYKNPYHNQ 80 (357)
T ss_dssp CCCCCCHHHHHHHTTTTSTTCCHHHHHHHTTSCHHHHHHHHHHHHTTHHHHTTCCHHHHHHHHHHHHHHHTTTCCSSSSH
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCHHCCHHCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 99889899999986455699980130101389829999999999878376439899999999999998457789875359
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAal~HD~~HpG~~N~flv~s~~~LA~lYnd~SvLEnhH~~~~~~lL~ 160 (357)
T d1taza_ 81 IHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVYNDRSVLENHHISSVFRLMQ 160 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHHHHHHTCHHHHHHTTSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999999635632338999999999999988248899635799863887888639987789999999999980
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~i~~~l~~~~~~~~r~~ii~~ILaTDm~~H~~~l~~~~~~~~~~~~~~r~~~~~~lik~ADis~~~rp~~~~~~W~ 240 (357)
T d1taza_ 161 DDEMNIFINLTKDEFVELRALVIEMVLATDMSCHFQQVKTMKTALQQLERIDKPKALSLLLHAADISHPTKQWLVHSRWT 240 (357)
T ss_dssp SGGGCTTTTSCHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHTCGGGSCHHHHHHHH
T ss_pred CCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 61000103899899999999999998222267689999999999974114109999999998623554236779999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~l~~Ef~~Qgd~E~~~gl~~sp~~dr~~~~~~~~QigFi~~iv~Plf~~l~~~~p~~~~p~~~~~~~n~~~~~~~~~~~ 320 (357)
T d1taza_ 241 KALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADEDSKSKNQPSFQWRQP 320 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTCC------CCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998899845999987668754320788999999999999999998770653688899999999899987641
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~en~~~~~~~~a~ 357 (357)
T d1taza_ 321 SLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKERAAS 357 (357)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 2234557876234321314556545438999987439
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=100.00 E-value=0 Score=26874.96 Aligned_cols=1 Identities=100% Similarity=0.005 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~f~~~~f~l~~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyf 80 (357)
T d2b61a1 1 SVQNVVLFDTQPLTLMLGGKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYF 80 (357)
T ss_dssp CCEEEEESSSSCEECTTSCEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCE
T ss_pred CCCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEE
T ss_conf 97428998479825689986589569999623337889988998488776653335678887588712799766777518
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 VI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~ 160 (357)
T d2b61a1 81 FISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMD 160 (357)
T ss_dssp EEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEE
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 99855667766667767889888997776422110689999999999871866488884040788899999874267774
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~ 240 (357)
T d2b61a1 161 NIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWG 240 (357)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf 33244456433235788878899999828777788755688830689999999886404789999874522234433236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~ 320 (357)
T d2b61a1 241 DYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQ 320 (357)
T ss_dssp CCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 53569999999889887607999999999986632654333338999862699889998477506598999999999986
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~v~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~~ 357 (357)
T d2b61a1 321 SGVDLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAGN 357 (357)
T ss_dssp TTCEEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 6998699997999875554769899999999997359
|
| >d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=100.00 E-value=0 Score=26872.86 Aligned_cols=1 Identities=0% Similarity=-1.024 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 M~kI~vipGDGIGpEV~~~~~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~dail~Gai~~p~~~~ 80 (357)
T d1a05a_ 1 MKKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDA 80 (357)
T ss_dssp CCEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTT
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 97899977678669999999999999987708985999997552425441994899999999973065406656887567
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~lR~~ldlyanvRP~k~~pg~~~~~pl~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~a~~~~ 160 (357)
T d1a05a_ 81 YPPAKRPEQGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVIDGKRRGFNTM 160 (357)
T ss_dssp SCGGGSHHHHHHHHHHHHTCCEEEEEEECCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSSCEEEEETTEEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEEEEEEE
T ss_conf 78555666477889975695588777640367666789886667761399987455643357753221267764899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~t~~~~~ri~~~Af~~a~~r~k~vt~v~K~ni~~~~~lf~~~~~eva~~yp~i~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (357)
T d1a05a_ 161 VYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLETTRLWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLLT 240 (357)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 96289999999999988645786488885366411368999999999865898278751799999998745456567851
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~ps~nig~~~a~fE~~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~Av 320 (357)
T d1a05a_ 241 GNMFGDILSDEASQLTGSIGMLPSASLGEGRAMYEPIHGSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEAAV 320 (357)
T ss_dssp CHHHHHHHHHHHHHTTSCGGGCEEEEECSSCEEEEESSCCCGGGTTTTCSCCHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 17888878899988735765410300068730102456878000589865949999999999972089879999999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~i~~g~~T~Dlgg~~t~~~~T~e~~daV~~~l~~~ 357 (357)
T d1a05a_ 321 QRVLDQGLRTADIAAPGTPVIGTKAMGAAVVNALNLK 357 (357)
T ss_dssp HHHHHTTCCCGGGCCTTSCCCCHHHHHHHHHHTTTCC
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 9999769967566999998768999999999987469
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Probab=100.00 E-value=0 Score=26872.21 Aligned_cols=1 Identities=0% Similarity=-0.227 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~p~~~~~~y~~~~G~tG~Gv~VaViDtGvd~~H~dl~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 80 (357)
T d1t1ga_ 1 AAPTAYTPLDVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNGPDGEVE 80 (357)
T ss_dssp CCCEEECHHHHHHHTTCCTTCCCTTCEEEEEESSCCCCHHHHHHHHHHTTCCCCCEEEEESTTCCCCCCSCTTSTHHHHH
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99874789999998787889898897899997688778688987775058878998633799999887876556443005
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~d~~~~~GvAp~A~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~g~~vv~ 160 (357)
T d1t1ga_ 81 LDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLA 160 (357)
T ss_dssp HHHHHHHHHSTTSEEEEEECCSSHHHHHHHHHHHHHCTTTCCSEEEECCCEEGGGSCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 77643125414676998741247884589999998741149808965666576766543489998766532157867999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~p~~~~~~~~~~~~ 240 (357)
T d1t1ga_ 161 AAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSA 240 (357)
T ss_dssp ECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEECSSCEEEEEECBCHHHHCBCCCEECSSSCCCGGGTTSCCCCCS
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 84168743211344544201135776236654023678775445201266666433447744121367523354234556
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG~~ALl~q~~~~~~g~~np~l~~~~~~~~~dit~g 320 (357)
T d1t1ga_ 241 NPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEVFHDITEG 320 (357)
T ss_dssp STTCCCCCEECSEEEECCTTEEEEEEETTEEEEECSGGGHHHHHHHHHHHHHHHHSSCCCCCHHHHTTSCGGGEECCCSC
T ss_pred CCCCCCCCEECCEECCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCC
T ss_conf 67777773313321135787742774699666168831687999999999976405886765999986260133124326
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~a~~G~d~~tG~G~~n~~~~~~~l~p 357 (357)
T d1t1ga_ 321 NNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQALLP 357 (357)
T ss_dssp BCCCSSSSCCSBCCSSSBTTTBTCEECHHHHHHHHCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 7788888776567668988846741549999874088
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Probab=100.00 E-value=0 Score=26871.56 Aligned_cols=1 Identities=0% Similarity=0.105 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lPK~eLH~HL~Gsi~~~~l~~la~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 80 (357)
T d2amxa1 1 EIKFLKKEDVQNIDLNGMSKKERYEIWRRIPKVELHCHLDLTFSAEFFLKWARKYNLQPNMSDDEILDHYLFTKEGKSLA 80 (357)
T ss_dssp SCCCCCHHHHTTCCGGGCCHHHHHHHHHHSCEEECCBBGGGCCCHHHHHHHHHHTTCCTTSCHHHHHHHHCCCSTTCCHH
T ss_pred CCCHHHHCCCCCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHH
T ss_conf 93455522555687000470789999983908898667878999999999999729799999499999874567626599
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~f~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~v~y~Elr~~p~~~~~~~g~~~~~v~~~i~~g~~~a~~~~~~~~~~~ 160 (357)
T d2amxa1 81 EFIRKAISVSDLYRDYDFIEDLAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIKGIKNATELLNNKIHVA 160 (357)
T ss_dssp HHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999878778733899999999999999998415161133454324545676457799999999999987439845898
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 l~~~~~~~~~~~~~~~~~~~a~~~~~~vvGidl~g~e~~~~~~~~~f~~ar~~gl~it~HaGE~~~~~~~~~i~~ai~~l 240 (357)
T d2amxa1 161 LICISDTGHAAASIKHSGDFAIKHKHDFVGFDHGGREIDLKDHKDVYHSVRDHGLHLTVHAGEDATLPNLNTLYTAINIL 240 (357)
T ss_dssp EEEECCCCCSHHHHHTTTHHHHHTTTTEEEEECCSSCCCCGGGHHHHHHHHHTTCEEEEEESCCTTCSSSHHHHHHHHTS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 63210266125557999999996388657312467766623469999999831876443455458999747899999704
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~RIgHGv~~~~d~~l~~~l~~~~I~leiCPtSN~~~~~~~~~~~HP~~~l~~~Gv~v~l~TDDp~~f~t~ls~ey~~~ 320 (357)
T d2amxa1 241 NVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNVKSMDTHPIRKLYDAGVKVSVNSDDPGMFLSNINDNYEKL 320 (357)
T ss_dssp CCSEEEECGGGGGCHHHHHHHHHHTCEEEECHHHHHHTTSSSCSTTCTHHHHHHTTCEEEECCBCHHHHTCCHHHHHHHH
T ss_pred CCCCCCCCHHEECCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHCCCHHHHHHHH
T ss_conf 97313652430058788998887185389887500242358970028999999889959995899412178879999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~~ls~~el~~l~~nsi~~sF~~~~~K~~l~~~~~ 357 (357)
T d2amxa1 321 YIHLNFTLEEFMIMNNWAFEKSFVSDDVKSELKALYF 357 (357)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHC
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9981989999999999999986899999999998659
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=100.00 E-value=0 Score=26870.41 Aligned_cols=1 Identities=100% Similarity=1.301 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~g~~~~~~~f~w~~~~~~~~~~~~~i~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~ 80 (357)
T d1gcya2 1 DQAGKSPNAVRYHGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFW 80 (357)
T ss_dssp CCCCCCTTCCCCGGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTC
T ss_pred CCCCCCCCCEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCH
T ss_conf 95556898605358987788624468788777747999999789999739999996947547866777777888788470
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T d1gcya2 81 HDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGD 160 (357)
T ss_dssp SSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTST
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 30656866799999999999999638737898700354788875100465688765456677778888878555445665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~dln~~np~v~~~~~~~~~~~~~~~giDGfR~Daa~~i~~~~~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~ 240 (357)
T d1gcya2 161 ADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQ 240 (357)
T ss_dssp TBBCTTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGSCTTSGGGGSCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCHHHH
T ss_conf 54477987999999999998777528987999515308999999998501788234543225763011011210110456
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~~~~~~~~~~la~a 320 (357)
T d1gcya2 241 IIKDWSDRAKCPVFDFALKERMQNGSIADWKHGLNGNPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYA 320 (357)
T ss_dssp HHHHHHHHHTSCEECHHHHHHHHHSCGGGGGGSGGGCSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66767640344310035554300456999999985076656645257740477755424457864334287999999999
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 lllt~pGiP~IyyGde~d~g~~d~i~~li~iRk~~~i 357 (357)
T d1gcya2 321 YILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGV 357 (357)
T ss_dssp HHHHSSSEEEEEHHHHHTSSCHHHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9995799127970785467886999999999976879
|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Fungal peroxidase (ligninase) species: Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=100.00 E-value=0 Score=26869.78 Aligned_cols=1 Identities=0% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 a~c~~g~~~~na~cc~~~~v~~dlq~~~~~~~c~~~A~~~lRL~FHDcfv~~~~~g~~~~gGcDgSill~~~~E~~~~~N 80 (357)
T d1yyda1 1 AVCPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTVEPNFSAN 80 (357)
T ss_dssp CBCTTSCBCSCGGGTTHHHHHHHHHHHTTTTSSSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTTTGGGSGGG
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 92899753677435467999999999985587507899999999824105103567678999781302178644678665
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~Gld~i~~~~~~~~~~~~~VScADiialAardAV~~~~GGP~~~v~~GR~Da~~a~~~~~LP~p~~~~~~l~~~Fa~~~G 160 (357)
T d1yyda1 81 NGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGG 160 (357)
T ss_dssp TTTHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCCTTCSCCTTCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88799999999999637998999999999999997306897204248888642234446789864569999999766512
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 lt~~dmVaLsGAHTIG~ah~~~~~~~~~~~~~tp~~fDn~~f~~ll~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~L~ 240 (357)
T d1yyda1 161 FTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQ 240 (357)
T ss_dssp CCHHHHHHHGGGGGGCEESSSSTTCSCEESSSCTTSCSSHHHHHHTBCCCBCSSCSCCTTEECBSCCCCBTTBCCCCEEH
T ss_pred CCHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 88377611323331000245677754333466656301799999986368988888887601377744440102466248
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 SD~~L~~D~~T~~~V~~yA~n~~~F~~~Fa~AmvKms~lG~~~~~l~dcs~v~p~~~~~~~~~~~~p~~~~~~d~~~~~~ 320 (357)
T d1yyda1 241 SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHNRNSLIDCSDVVPVPKPATGQPAMFPASTGPQDLELSCP 320 (357)
T ss_dssp HHHHHHHSTTTHHHHHHTTTCHHHHHHHHHHHHHHHTTTTSCGGGSEECGGGSCCCCCCCCCCCCBCTTCCGGGBCCCCT
T ss_pred HHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 99988419889999999965999999999999999997699953144577657899887788876789998676553055
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
-
T Consensus 321 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (357)
T d1yyda1 321 SERFPTLTTQPGASQSLIAHCPDGSMSCPGVQFNGPA 357 (357)
T ss_dssp TSCCCCCCBCSCSSCCCCCSSTTSCSCCCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8999887789985334457899877689756678999
|
| >d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Acid proteases superfamily: Acid proteases family: Pepsin-like domain: Pepsin species: Mucor pusillus [TaxId: 4840]
Probab=100.00 E-value=0 Score=26868.62 Aligned_cols=1 Identities=0% Similarity=-0.825 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~~C~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~y~~ 80 (357)
T d1mppa_ 1 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 80 (357)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CCCCCCCEECCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 95445525458798899999982899599999948975428714899998553589878874587622679445886588
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 g~~~G~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 160 (357)
T d1mppa_ 81 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 160 (357)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred CCEEEEEEEEECCCCCCEECCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 71789998350212660488688999994045423215655433211235545776422244688788789999861565
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~fs~~l~~~~~~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ilDSGts~~~ 240 (357)
T d1mppa_ 161 SSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFI 240 (357)
T ss_dssp SSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEE
T ss_pred CCCEEEEEECCCCCCCEEECCCCCHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEECCEEEEECCCCCCEEEECCCCCCC
T ss_conf 55169998336899963987531766727730578721477874368998706998875765328973148613674236
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 lp~~~~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~c~~~~~~~~ 320 (357)
T d1mppa_ 241 APSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG 320 (357)
T ss_dssp EEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEECHHHEEEEECCCCCEEEEEECCCC
T ss_conf 98999999999856775346885102420144568507999811565356679998659928996589988999984799
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~~~ 357 (357)
T d1mppa_ 321 GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEND 357 (357)
T ss_dssp SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCCC
T ss_pred CCCEEECHHHHCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf 9999945697397999998999999999998678998
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=0 Score=26868.25 Aligned_cols=1 Identities=0% Similarity=0.138 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~p~~a~~~~~l~~~G~~~l~d~~G~~v~lrGv~~~~~~w~~~~~~~~~~~~l~~~~G~N~VRlp~~~~~~~~ 80 (357)
T d1g01a_ 1 PAGMQAVKSPSEAGALQLVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGENGY 80 (357)
T ss_dssp CTTCTTCCCHHHHCSCEEEEETTEEEEECTTSCBCCCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESSSSST
T ss_pred CCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEEEEEECCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 98544567965346788599738589999999999999885676200465568999999998649977988636557887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~~~~~~~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~ 160 (357)
T d1g01a_ 81 ATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGP 160 (357)
T ss_dssp TTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTSGGGTTHHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 44989999999999999978988998613268888880355666779999999975476237999987516353567654
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~~~~~~~~~~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~ 240 (357)
T d1g01a_ 161 GLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSS 240 (357)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHH
T ss_conf 56676136899999999999999853993499804876665200013557999779998872675677667777566447
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~isw~~W~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T d1g01a_ 241 ERSNVMANVRYALDNGVAVFATEWGTSQANGDGGPYFDEADVWLNFLNKHNISWANWSLTNKNEISGAFTPFELGRTDAT 320 (357)
T ss_dssp GCCCHHHHHHHHHHTTCCEEEEEEESSBTTTBSCCCHHHHHHHHHHHHHTTCCEEEEEECCSSSTTCSBCCCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78999999999997699889983377678887876789999999999974993589957588776433067665566754
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~w~~~~l~~sG~~v~~~l~g~~~~~~~~~ 357 (357)
T d1g01a_ 321 DLDPGANQVWAPEELSLSGEYVRARIKGIEYTPIDRT 357 (357)
T ss_dssp CSSCCTTCCCCGGGBCHHHHHHHHHHHTCCCCCCCCC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 5566667888765615467999998536778885789
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26868.00 Aligned_cols=1 Identities=100% Similarity=0.404 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCC
T ss_conf 98899968886899999999997869899997897555556688887403303897599982067979988887525987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 89985203553446559999999999999999999998489988689999845651889888958999999988699999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCEEECHHHHHHHHHH
T ss_conf 99999999999996997899996454599877677714789999999838972699799980444443044878999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 320 (357)
T d1db3a_ 241 QQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLL 320 (357)
T ss_dssp SSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCC
T ss_pred HCCCCCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 27899759978998164599999999983976321455331000233211222433566760376155357886446404
Q ss_pred ------------------------------------C
Q ss_conf ------------------------------------8
Q 001738 683 ------------------------------------V 683 (1019)
Q Consensus 683 ------------------------------------~ 683 (1019)
+
T Consensus 321 ~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~kk~~ 357 (357)
T d1db3a_ 321 GDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 357 (357)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 4889999997998689899999999999999970129
|
| >d16vpa_ d.180.1.1 (A:) Conserved core of transcriptional regulatory protein vp16 {Herpes simplex virus type 1 [TaxId: 10298]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Conserved core of transcriptional regulatory protein vp16 superfamily: Conserved core of transcriptional regulatory protein vp16 family: Conserved core of transcriptional regulatory protein vp16 domain: Conserved core of transcriptional regulatory protein vp16 species: Herpes simplex virus type 1 [TaxId: 10298]
Probab=100.00 E-value=0 Score=26805.38 Aligned_cols=1 Identities=100% Similarity=1.334 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~r~psPp~~~sp~~Ly~rLl~eL~F~eGp~Lls~le~wNeDLFSclP~n~dLY~~~~~LSt~~~eVi~~~~~~~p~~~~i 80 (356)
T d16vpa_ 1 SRMPSPPMPVPPAALFNRLLDDLGFSAGPALCTMLDTWNEDLFSALPTNADLYRECKFLSTLPSDVVEWGDAYVPERTQI 80 (356)
T ss_dssp CCSCCCCCCCCHHHHHHHHHHHHTCTTHHHHHHHHHHCCCCCSTTSCCCGGGGTTCGGGCSCHHHHHHHHHHCCCCCSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf 99998988789799999999873998517899999984205550377874676531055389899999876179987750
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 dL~ahG~~~~P~~Pa~~eeLP~Yv~avq~fF~sELrAREe~Y~~Ll~~YC~AL~~yLr~sa~~~~r~~~~~~~~~~~~~~ 160 (356)
T d16vpa_ 81 DIRAHGDVAFPTLPATRDGLGLYYEALSRFFHAELRAREESYRTVLANFCSALYRYLRASVRQLHRQAHMRGRDRDLGEM 160 (356)
T ss_dssp CTTCCCSSCCCCCCSSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 01478998899999882353899999999999999998999999999999999999999887751310344541679999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~rq~i~~rYYRE~arLArllylHLYls~tRevswrl~A~Q~~~q~vF~~L~y~W~q~RQf~ClFhPvlfnhGvV~leg~p 240 (356)
T d16vpa_ 161 LRATIADRYYRETARLARVLFLHLYLFLTREILWAAYAEQMMRPDLFDCLCCDLESWRQLAGLFQPFMFVNGALTVRGVP 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEESCSHHHHSSCCSCSBCCSEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEEEECCCEEEECCEEEECCCC
T ss_conf 99999999999999999999999999999999999999986132634605740113432367535335417635667987
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 L~a~~Lr~~Ny~R~eLGLPlvR~~lvEE~~~pL~~~P~fs~~~pRssGyl~~~IraKmeaYS~~hp~~~~~~~~dH~YaR 320 (356)
T d16vpa_ 241 IEARRLRELNHIREHLNLPLVRSAATEEPGAPLTTPPTLHGNQARASGYFMVLIRAKLDSYSSFTTSPSEAVMREHAYSR 320 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCTTTSCTTSCSCCCCCCCTTSCCHHHHHHHHHHHHHTSTTC-----------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 88899988889998718840110100468987425886556785305689999999864420368888875444576447
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~nYGst~eaml~~~~~~~p~~~~~~~~r~~~~ 356 (356)
T d16vpa_ 321 APTKNNYGSTIEGLLDLPDDDAPEEAGLAAPRLSFL 356 (356)
T ss_dssp ----------------------------CCCEEEEC
T ss_pred CCCCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 888888773232101699999635532234321359
|
| >d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: UROD/MetE-like family: Uroporphyrinogen decarboxylase, UROD domain: Uroporphyrinogen decarboxylase, UROD species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26798.86 Aligned_cols=1 Identities=0% Similarity=-1.423 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~ne~~l~al~g~~~dr~PVw~MrqAGRylpey~~~r~~~~f~e~~~~pe~~ae~tl~p~~~~~~DaaiifsDil~~ 80 (356)
T d1r3sa_ 1 FPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVV 80 (356)
T ss_dssp CCCCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHTSCHHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCTTHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 99764489999975998999998888445425889999871289999855999999998448986795425622442101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~ealG~~v~f~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~l~~v~eai~~~~~~l~~~~pliGf~ggP~Tla~yli~~~~ 160 (356)
T d1r3sa_ 81 PQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGG 160 (356)
T ss_dssp HHHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSC
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCC
T ss_conf 34228635644889866776433202332101100002144899999999998735565663032031888999872134
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~pe~~~~ll~~lt~~~~~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~~~i~~~i~~~~~~ 240 (356)
T d1r3sa_ 161 SSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLRE 240 (356)
T ss_dssp CSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 21378898876303577889999999988999999860566540203520121357888888899999999999875101
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~i~~~~~~~~~l~~~~~~g~d~is~D~~~~l~~~~~~~~~~i~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~ 320 (356)
T d1r3sa_ 241 AGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGP 320 (356)
T ss_dssp TTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 24777302101044787888874248561254235799999998489832882888899859999999999999998189
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 ~~~I~nlGhGI~p~tp~env~a~v~~vr~~~k~~~~ 356 (356)
T d1r3sa_ 321 HRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ 356 (356)
T ss_dssp SSEEEEESSCCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHCC
T ss_conf 994896999759899999999999999996887459
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=100.00 E-value=0 Score=26796.21 Aligned_cols=1 Identities=0% Similarity=-0.957 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~g~~g~~~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G~TWs~~~~v~~~~~~~~~ 80 (356)
T d1w8oa3 1 GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPI 80 (356)
T ss_dssp CCCCEEEEEEEETTSTTCSCEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEEEECCBCSSSC
T ss_pred CCCCCCEEECCCCCCCCCEEEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 99741200110057688383670789998999999999646489988887329999906899787788873238887764
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~v~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1w8oa3 81 KGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAAS 160 (356)
T ss_dssp BEEEEEEEEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECGGGSCCSTTCCEEEECS
T ss_pred CCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 34466248996899839999964035774443336787787479999983687652104652056655434432123466
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 240 (356)
T d1w8oa3 161 GEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV 240 (356)
T ss_dssp EECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEE
T ss_pred CCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEE
T ss_conf 32046000244664045553012236632577752688752001446675543316899257620255642555540577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~S~D~G~tw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~~S~D~G~tW~~~~~i~~~ 320 (356)
T d1w8oa3 241 AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG 320 (356)
T ss_dssp EEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCTTCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCEECCCCCEECCC
T ss_conf 88426887543022014335788787326743665346789809999799998897316999990799155886081799
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 ~~~Ys~~~~~~dg~i~~~ye~g~~~~~~~~~l~~~~ 356 (356)
T d1w8oa3 321 SMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAWLG 356 (356)
T ss_dssp ECCCEEEEECTTSCEEEEECCSSEEEEEEECHHHHT
T ss_pred CCCCCEEEECCCCEEEEEEECCCCCEEEEEEHHHCC
T ss_conf 976863689589989999988997389996289979
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=0 Score=26795.30 Aligned_cols=1 Identities=0% Similarity=-1.157 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~ 80 (356)
T d1rkxa_ 1 INNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQP 80 (356)
T ss_dssp CCHHHHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCHH
T ss_conf 97344188989997888779999999999779989999789986177776640146876998405685760023430202
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 44444421565653246775353322334035666643045543222222212234565433322234568988432432
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a 240 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG 240 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCH
T ss_conf 33204566776521342010355733774267776488855143799999999718996688621342122123342200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~ 320 (356)
T d1rkxa_ 241 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWN 320 (356)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECHHHHHHHHCCCCCCC
T ss_conf 23455540345654444332222223322110245666787489862797179999875765686999999879986888
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 l~egi~~ti~wyk~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1rkxa_ 321 LNTTLEYIVGWHKNWLSGTDMHEYSITEINNYMNTK 356 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
T ss_conf 999999999999998748998998999999971589
|
| >d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: Chelatase family: Ferrochelatase domain: Ferrochelatase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26795.15 Aligned_cols=1 Identities=0% Similarity=-0.693 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~~~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa~~l 80 (356)
T d1lbqa_ 1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATEV 80 (356)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99659999878899986899999999758986446878899998656475687999999998189881089999989999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~~~~ 160 (356)
T d1lbqa_ 81 CKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 160 (356)
T ss_dssp HHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 98850233435772168873146320888999998579864378844234427888899999999988750102566426
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~~~gdpY~~q~~~t~~~v~~~l~~~~~~~~~fQS 240 (356)
T d1lbqa_ 161 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLVWQS 240 (356)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTCSHHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
T ss_conf 44644312279999999999999767544567379995477653333327874689999999876430566645777640
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 r~g~~~WL~P~t~~~le~l~~g~k~v~v~p~gFvsD~lETL~Eidie~~~~~~gg~~f~~vp~lN~~p~fi~~La~lV~~ 320 (356)
T d1lbqa_ 241 QVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDKFKRCESLNGNQTFIEGMADLVKS 320 (356)
T ss_dssp CCSSSCBCSCBHHHHHHHHGGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGGEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 45677777875599999840489748998885242234449887777999971887499868998998999999999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 ~l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1lbqa_ 321 HLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 356 (356)
T ss_dssp HHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBCCC
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
T ss_conf 865685567446644334768871118698616899
|
| >d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Isocitrate/Isopropylmalate dehydrogenase-like superfamily: Isocitrate/Isopropylmalate dehydrogenase-like family: Dimeric isocitrate & isopropylmalate dehydrogenases domain: 3-isopropylmalate dehydrogenase, IPMDH species: Bacillus coagulans [TaxId: 1398]
Probab=100.00 E-value=0 Score=26795.02 Aligned_cols=1 Identities=0% Similarity=-1.190 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 m~~rI~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~et~e~i~~~dail~Gav~~p~~~ 80 (356)
T d1v53a1 1 MKMKLAVLPGDGIGPEVMDAAIRVLKTVLDNDGHEAVFENALIGGAAIDEAGTPLPEETLDICRRSDAILLGAVGGPKWD 80 (356)
T ss_dssp CCEEEEEEEESTTHHHHHHHHHHHHHHHHTTSSCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 97079998878765999999999999998624997499999556899997499288999999986082799256798867
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~lR~~ldlyanvRPv~~~~gi~~~~p~~~~~~~~vD~vivREnteg~Y~g~~~~~~~~~~~~~~~~~ 160 (356)
T d1v53a1 81 HNPASLRPEKGLLGLRKEMGLFANLRPVKAYATLLNASPLKRERVENVDLVIVRELTGGLYFGRPSERRGPGENEVVDTL 160 (356)
T ss_dssp SSCGGGCHHHHHHHHHHHHTCCEEEEEEECCGGGTTTSSBCHHHHTTCEEEEEEECSSBTTTCSCEEEESSTTCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCCCCCCCCC
T ss_conf 78988583021689998708725566665430344579977667788239996046766065305330224652002200
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~t~~~~~ri~r~af~~A~~r~kkVt~v~K~nv~~~~~~~~~~~~eva~eyp~I~~~~~~vD~~~~~lv~~P~~fdViv~ 240 (356)
T d1v53a1 161 AYTREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAKKYPDVELSHMLVDSTSMQLIANPGQFDVIVT 240 (356)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCEEEC
T ss_conf 02321430034577767874598465775254102450586999999836898699998836678898722344664532
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~Nl~GDIlSDl~a~l~GglGl~~s~ni~~d~~a~fEp~HGsapdiaGk~~aNP~a~ils~ammL~~~lg~~~~A~~i~~A 320 (356)
T d1v53a1 241 ENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKA 320 (356)
T ss_dssp CHHHHHHHHHHHTTTTSCTTSCEEEEECSSSCEEEEESSCCCGGGTTSSCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 67888888899988736763111200268731463378887234448996592999999999998637987999999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 v~~~l~~g~~T~Dl~~~~gg~~~T~e~~dav~~~L~ 356 (356)
T d1v53a1 321 VDDVLQDGYCTGDLQVANGKVVSTIELTDRLIEKLN 356 (356)
T ss_dssp HHHHHHTTEESSSSCCTTCEECCHHHHHHHHHHHCC
T ss_pred HHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHCC
T ss_conf 999998599473556679970379999999998429
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Probab=100.00 E-value=0 Score=26794.99 Aligned_cols=1 Identities=0% Similarity=-0.095 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~p~~~~~~~~~~~~~~~~~Rl~~R~LdLR~~~~~~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~eg~~~~~~ 80 (356)
T d1l0wa3 1 TPPFPVDAGWRGEEEKEASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLV 80 (356)
T ss_dssp CCSSCCSSGGGTCCCCCCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHH
T ss_conf 96962685445654456698887413365117887999999999999999999988898999898124677764432002
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~yL~~Spel~lk~ll~~g~~~Vf~i~~~FRaE~~~t~H~~EFtmLE~e~~~~~~~~~m~~~E~li~~v~~~ 160 (356)
T d1l0wa3 81 PYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFRE 160 (356)
T ss_dssp ECTTSTTEEEECCSCSHHHHHHHHHTTCSEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22113201117772856777775232368679982123522268754045668877666788878999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~f~r~~~~~a~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~p~~~~~~~~~~~~~~ 240 (356)
T d1l0wa3 161 ALGVELPLPFPRLSYEEAMERYGSDKPDLRREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVR 240 (356)
T ss_dssp HTCCCCCSSCCEEEHHHHHHHHSSSSCCCSCCSCCEEEEECCBSBCCCTTTSCCCBSSCTTBCBCSTTTTHHHHCGGGCB
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEEECCCCCCCHHHHCHHHCCCCCCE
T ss_conf 72877778977511776677870474767777566542036653113110012233437743687665100103888620
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 a~~FdL~~~G~ElanG~~r~~d~~~~~~r~~~~~~~~~~~~~~~~~yl~a~~~G~PP~~G~glGldRLlm~l~g~~~Ird 320 (356)
T d1l0wa3 241 ALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGSPSIRE 320 (356)
T ss_dssp BSEEEEEETTEEEEEEEEBCCCHHHHHHHHHHHTCCTTTHHHHTHHHHHHTTBTCCCEEEEEEEHHHHHHHHHTCSSGGG
T ss_pred EEEEECCCCCEEEECCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHH
T ss_conf 21230233878862107871748999999999767832357789999999667989962377709999999809995885
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 vi~FPR~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1l0wa3 321 VIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP 356 (356)
T ss_dssp GSSSCCCTTSCBTTTTBSEECCHHHHHHHTEEECCC
T ss_pred EECCCCCCCCCCCCCCCCCCCCHHHHHHCCEEECCC
T ss_conf 346899999998667899989999998668462185
|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Adenylylsulfate reductase A subunit species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=100.00 E-value=0 Score=26794.83 Aligned_cols=1 Identities=0% Similarity=-0.659 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~e~~e~DVlIIG~G~AGl~AA~~aa~~~~~~G~~V~vieK~~~~gg~s~~~g~~~~~~~~~~~~ 80 (356)
T d1jnra2 1 VYYPKKYELYKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTG 80 (356)
T ss_dssp CCCCSSCCCCCGGGSCEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSS
T ss_pred CCCCCCHHHHCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 97775033213556776687649899898889999999999978867697999967889997359877899974233323
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~Ds~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (356)
T d1jnra2 81 RSERQNTLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAA 160 (356)
T ss_dssp SBSCCCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf 56766899999999998606876188999988741123556876097742013323322333100246640788999998
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~i~~~~~~~~l~~~~~~~~~v~~~~~~~~~~G~~~~i~Ak~VILATGG~~~~~~~~~~~~~~~~~~~~~~~tG 240 (356)
T d1jnra2 161 KMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIFDTG 240 (356)
T ss_dssp HHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTCBS
T ss_pred HHHHCCEEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86304517899999887653024665214568877404837984078799917875331357777644564447987577
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 dG~~ma~~aGa~l~~~~~~q~~p~~~~~~~~~~~~~~~~~~~~~~~gl~~~g~~~~~~g~rf~~~~~~~g~~a~~~~~~~ 320 (356)
T d1jnra2 241 SGYYMGLKAGAMLTQAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRF 320 (356)
T ss_dssp HHHHHHHHHTCCEESCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 09999998534524787247616645782432456567664004352121420017766557355655412328999999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
+
T Consensus 321 i~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~~~~~~ 356 (356)
T d1jnra2 321 ILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLS 356 (356)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 972899887788999999988776899998507999
|
| >d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase family: Oligoxyloglucan reducing end-specific cellobiohydrolase domain: Oligoxyloglucan reducing end-specific cellobiohydrolase species: Yeast (Geotrichum sp. M128) [TaxId: 203496]
Probab=100.00 E-value=0 Score=26793.95 Aligned_cols=1 Identities=0% Similarity=-1.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
=
T Consensus 1 ~~~~w~~~~~g~ee~~~~~l~spp~g~~l~s~~gd~~gf~~~dl~~p~~~~~~p~~~~~~~id~a~~~p~~ivr~G~~~~ 80 (356)
T d2ebsa2 1 WAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGNISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGH 80 (356)
T ss_dssp CCCCEEECCTTCBCCBEEEEECCSSSSSEEEEESSSBCBEESCTTSCCCBCCSSCCSEEEEEEECSSCTTCEEEEEECCC
T ss_pred CCCCCEECCCCEEHHHEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHEEEHHHCCCEEEEEECCCC
T ss_conf 99854576578010000015758999810688864785597458887535268885640120104118956999967788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~StDgG~TW~~~~~~~~g~~~~~~~~g~ia~s~dg~~ivw~~~~~~~~~gv~~StD~G~TW~~~~~~~~~ 160 (356)
T d2ebsa2 81 EYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKA 160 (356)
T ss_dssp CBTTBCTTEEEESSSSSSEEECSCCCTTCSTTCCSCCEEEECTTSCCEEEECCCTTCCSCCEEESSTTSCCBCCEESCCS
T ss_pred CCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCEEECCCCCCC
T ss_conf 78888872799840522442787688886566446646999458993078731467886449970797113876777888
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~i~~d~~~~~~~Ya~~~g~ly~StDgG~TW~~~~~~~~~~~~~~~~v~p~~~g~v~v~~~~~Gl~~StDgG~TWt~i 240 (356)
T d2ebsa2 161 QTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFTRV 240 (356)
T ss_dssp CCSCEEECSSSTTCEEEEETTEEEEESSTTSEEEECCBTCCCCCCCCCEECTTSTTCEEEEETTTEEEEESSTTSBCEEE
T ss_pred CCCEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCEEEECCCCCEEEEC
T ss_conf 73189996767965785046319994787654532256775454036888741699502112445259922776348981
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~g~~~~~~~~GvyrS~D~G~TW~~Ind~~~~~g~~~~i~~Dp~~~grvYv 320 (356)
T d2ebsa2 241 GTANATLVSVGAPKSKSDGKKASAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYL 320 (356)
T ss_dssp SSCEEEEEEEEEEC---------CCEEEEEEEESSTTSCSEEEEESSTTSSCEECCCTTSCTTCEEEEEECTTSTTCEEE
T ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEE
T ss_conf 47888764013333566454678875599999864798076999969997934995997777752289718976998999
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 gT~GrGi~y~~~~~~~s~~~~~~~~~~~~~~~~~~~ 356 (356)
T d2ebsa2 321 GTNGRGIVYADLTNKKSNEEKSTAKCANGQKGTHCY 356 (356)
T ss_dssp EEBSSCEEEEECCC----CCCCEEEETTCCSSSCCC
T ss_pred EECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 968876799967788577887420127888887679
|
| >d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Phosphoenolpyruvate/pyruvate domain family: Pyruvate phosphate dikinase, C-terminal domain domain: Pyruvate phosphate dikinase, C-terminal domain species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=0 Score=26793.38 Aligned_cols=1 Identities=200% Similarity=1.865 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
+
T Consensus 1 ~~~~~~~~~~ad~~r~i~i~aNi~~~~e~~~a~~~gadGVGL~RtEflfl~~~~~~~~~~~~i~~p~~ee~~~~~~~~~~ 80 (356)
T d1vbga1 1 SGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRQMIMAPTLELRQQALDRLLP 80 (356)
T ss_dssp SCHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCCSEEEEEHHHHHTTCHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 93488999987537764899858999999999847997171777888741886304678987629999999999998788
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~q~~~y~~i~~~~~g~pvtiRtlD~~~dk~lp~~~~~~~~~~l~~~~g~dk~~~~~~~~~~~E~NP~LG~RGiR~~l~~p 160 (356)
T d1vbga1 81 YQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGNIEDIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLGISYP 160 (356)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCSCGGGGSCCSCHHHHHHHHHHHHCCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHSH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHCEEEEECHHHH
T ss_conf 78999999999748996699984278776676630567999999871998024554321334688432020455010211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~f~~ql~Ail~A~~~~~~~~~~~~~~IMiPmV~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~iGiMiEvPsaal~~d~ 240 (356)
T d1vbga1 161 ELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADE 240 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 21357899999898744545756536550058763999999998887757888873066667435552357289997999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~DF~SIGTNDLtQytla~DRdn~~~~~~~y~~~~~~~~dp~~pav~~~i~~lI~~a~~~~k~~~~~i~vsiCGE~a 320 (356)
T d1vbga1 241 IAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHG 320 (356)
T ss_dssp HTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGG
T ss_pred HHHEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 96567899953038999999861310000026888630122587547789999999999999988507999699706434
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 sdp~~~~~L~~lGi~~iS~sp~~ip~~k~a~aq~~~ 356 (356)
T d1vbga1 321 GEPSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVLV 356 (356)
T ss_dssp GSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCC
T ss_conf 799999999987999899890778999999977509
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=100.00 E-value=0 Score=26793.73 Aligned_cols=1 Identities=0% Similarity=-0.627 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 f~~RG~mlD~aR~f~~~~~i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~~di~~i 80 (356)
T d1jaka1 1 YAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEI 80 (356)
T ss_dssp CSEEEEEEECSSSCCCHHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 98438678767998599999999999998299079999864887610016873465436756667788885289999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 v~ya~~rgI~viPEid~PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~~~~Hi 160 (356)
T d1jaka1 81 VRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHI 160 (356)
T ss_dssp HHHHHHTTCEEEEECCCSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEEC
T ss_pred HHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999729868644777304679987584002568998644466778865566856789999999999987515507986
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 GgDE~~~~~~~~~~~f~~~~~~~v~~~gk~~~~W~e~~~~~~~~~~vV~~W~~~~~~~~~~~~~~~~~~~G~~vI~s~~~ 240 (356)
T d1jaka1 161 GGDEAHSTPKADFVAFMKRVQPIVAKYGKTVVGWHQLAGAEPVEGALVQYWGLDRTGDAEKAEVAEAARNGTGLILSPAD 240 (356)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEGGGGGSCCCTTCEEEECCCTTSCHHHHHHHHHHHHTTCEEEECCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 00244444078999999999999998599458740013678988867887730356763267999999809969977870
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~Yld~~~~~~~~~~~~w~~~~~~~~~y~~~P~~~~~~~~~~~ilG~e~~lWtE~i~~~~~~~~~~~PR~~AlAEr~Ws~ 320 (356)
T d1jaka1 241 RTYLDMKYTKDTPLGLSWAGYVEVQRSYDWDPAGYLPGAPADAVRGVEAPLWTETLSDPDQLDYMAFPRLPGVAELGWSP 320 (356)
T ss_dssp TTCTTBCSSTTCSSSBCTTCCCCHHHHHSCCGGGSSTTCCGGGEEEEEEEECCTTCCSHHHHHHHHTTHHHHHHHHHHSC
T ss_pred HHEECCCCCCCCCCCCCCCCEEEHHHEEECCCCCCCCCCCHHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 12020366789987753345122311450366567874521056478855054777998999988775599999998688
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~d~~~f~~RL~~~~~~l~~~Gv~y~r~p~~pw~ 356 (356)
T d1jaka1 321 ASTHDWDTYKVRLAAQAPYWEAAGIDFYRSPQVPWT 356 (356)
T ss_dssp GGGCCHHHHHHHHHTTHHHHHHHTCCCCCCTTSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 867999999999999999999779980679999999
|
| >d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Chitinase B, catalytic domain species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=0 Score=26792.27 Aligned_cols=1 Identities=0% Similarity=-0.592 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~yy~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~lTHi~yaFa~i~~~g~~~~~~~~~~~~~~~~~~~~~~lK 80 (356)
T d1goia2 1 TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALK 80 (356)
T ss_dssp CCCEEEEEEECCHHHHHTCCSSCTTTCSSCGGGSCHHHHHHCSEEEEEEEEECTTSSEECCTTCCHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 98579999867745767624467766776720088404752994999879977996488258765267788999999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~p~lKvllSiGGW~~s~~~~~~~~~fs~~~~~~~~R~~Fi~siv~~l~~ygfDGIDIDWE~P~~~~~~~~~~l~~el~ 160 (356)
T d1goia2 81 AHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQAAEVDGFIAALQEIR 160 (356)
T ss_dssp GGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 87889869999837767788765543067885899999999999999999829982446420135444455336899999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~ls~a~~~~~~~~~~~~~d~~~l~~~vD~invMtYD~~g~w~~~tg~~spLy~~~~~p~~~~~ 240 (356)
T d1goia2 161 TLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFGDAAGPTFYNA 240 (356)
T ss_dssp HHHHHHHHHTTCTTSCCEEEEEEESSHHHHTTTGGGHHHHHTTCSEEEEECCCSSCTTSSSCCCTTCSSBCTTSCCBCCG
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 98778888746545543058840577777752104799863215746787302367888887887745477889733212
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~vsydd~~Si~~K~~y~~~~~LgGv~iW~l~~Dd~ 320 (356)
T d1goia2 241 LREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDNR 320 (356)
T ss_dssp GGGSSCCCCHHHHHHHCCSSBCCCHHHHHHHHHTSTTCCGGGEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECGGGSCT
T ss_pred CCCCCCCCCHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 55444566765456566887522225899977986599843405882149999999999999957998999981488899
Q ss_pred -----------------------------------C
Q ss_conf -----------------------------------8
Q 001738 683 -----------------------------------V 683 (1019)
Q Consensus 683 -----------------------------------~ 683 (1019)
.
T Consensus 321 ~gsLl~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (356)
T d1goia2 321 NGDLLAALDRYFNAADYDDSQLDMGTGLRYTGVGPG 356 (356)
T ss_dssp TCHHHHHHHHHHHCTTCCCTTCCCCSCBCCCCCCTT
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 967999987762687899653506788154178999
|
| >d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FucI/AraA N-terminal and middle domains superfamily: FucI/AraA N-terminal and middle domains family: L-fucose isomerase, N-terminal and second domains domain: L-fucose isomerase, N-terminal and second domains species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=26722.03 Aligned_cols=1 Identities=0% Similarity=-0.459 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~pkiGirp~~Dgr~~~~re~le~~t~~~ak~~a~~l~~~l~~~~g~~ve~V~~d~~i~~~~eA~~~aekf~~~~v 80 (355)
T d1fuia2 1 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNV 80 (355)
T ss_dssp CCSCSCCEEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHHHHHHHTTTE
T ss_pred CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 98678980677853356504432038999999999999999987412689976999467516886999999999866598
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 d~~i~v~p~w~~~~~~~~~~~~~p~~vw~fn~~erpG~vgl~a~~aa~~q~Gip~~~iyg~~vqd~~d~~~p~dv~ekll 160 (355)
T d1fuia2 81 GLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL 160 (355)
T ss_dssp EEEEEEESSCCCHHHHSCCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEEECSSCCCTTCCCCCHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHH
T ss_conf 77999825546615545314799866882689999868999999999986598734760776668754226699999999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~faRAa~av~~Lrg~~ig~iG~~~mGm~~~~~d~~~l~~~fGi~ve~iDm~El~rr~e~~i~D~eEv~~Al~w~k~~~~~ 240 (355)
T d1fuia2 161 RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRY 240 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCSTTCGGGSCCHHHHHHHHCCEEEEECTHHHHHHHHTTCSCHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99999999998658927887785677441257999999983995278759999999974689999999999999973302
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 g~d~n~~~~~~~~~~~~e~~e~~vkm~~~~rdlm~~n~~l~~~~~~ee~~g~~aia~gfqgqr~wtd~~p~~d~~ea~LN 320 (355)
T d1fuia2 241 GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILN 320 (355)
T ss_dssp CCCCSCGGGCCCHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHTTCHHHHTCCCEEEEEECCTTTTTTTSCCSHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCEEEEECCCCHHHCCCCCCHHHHHHHC
T ss_conf 41357512477776759899999999999999985081034414157656888425531245202103655107899857
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
.
T Consensus 321 s~~dwnG~rep~~~AtE~D~~~altMl~~~lLTgt 355 (355)
T d1fuia2 321 SSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGT 355 (355)
T ss_dssp SSEETTEECCCCCEEETTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 84444787686336633340108999999875089
|
| >d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase {Silicibacter pomeroyi [TaxId: 89184]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: RmlC-like cupins family: Gentisate 1,2-dioxygenase-like domain: Gentisate 1,2-dioxygenase species: Silicibacter pomeroyi [TaxId: 89184]
Probab=100.00 E-value=0 Score=26721.64 Aligned_cols=1 Identities=0% Similarity=-0.028 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~plw~~~~~~~p~~p~~~~~p~~w~~~~~~~~l~~~~~~~~~~~~~rr~~~l~np~~~~~~~ 80 (355)
T d3bu7a1 1 RDTPELEAYYDDLAKIETGALWTVANDIEPWEPTPKSAPVHWKWSDLRREVLRAIDLVRPEDAGRRVVYLRNPQRKDVSA 80 (355)
T ss_dssp CCCHHHHHHHHHHHHTTCCCGGGSCGGGSCSSCCCSSCCCEECHHHHHHHHHHHHHHSCSSCSSCCCEECCCGGGGGGTC
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHCCEEEEEEECCCCCCCCC
T ss_conf 98578999999998768945110046778999998862216009999999998741168311770599960798778777
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~t~~l~~~~q~l~PGe~~~~HrH~~~~~~~vi~G~g~~t~v~ge~~~~~~GD~~~~P~~~~H~h~n~~~~~~~~~l~~~D 160 (355)
T d3bu7a1 81 ACGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 160 (355)
T ss_dssp SBTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCCHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECC
T ss_conf 67204532076689983730115442048999898079989998877667999995899528622478997489998125
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~Pl~~~l~~~f~e~~p~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~~~sp~~~ypw~~~~~al~~~~~~~~~~~~~g~~ 240 (355)
T d3bu7a1 161 IPLTNCLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLI 240 (355)
T ss_dssp HHHHHHTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEE
T ss_pred HHHHHHCCCEECCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
T ss_conf 67876326300125840014555787602455344565443456776668533366442167789898547888778559
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 l~y~nP~tg~~~~~ti~~~~~~l~pG~~~~~hrH~~~~v~~v~~G~g~~~i~g~~~~~~~GDv~~vP~~~~h~~~N~s~~ 320 (355)
T d3bu7a1 241 LRYTNPQTGGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQER 320 (355)
T ss_dssp EEECCTTTSSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSS
T ss_pred EEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEECCEEEEEECCCEEEECCCCCEEEECCCCC
T ss_conf 99646655577752016789997899705883735707999997849999999998862899899499984785558998
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
-
T Consensus 321 e~~~Lf~~~D~P~~~~Lg~~~e~~~~~~~~~q~~~ 355 (355)
T d3bu7a1 321 DDACLFSFNDFPVMEKLGFWAEQALEDNGGHQIVA 355 (355)
T ss_dssp CCEEEEEEESHHHHHHTTCCCEEECCSTTTCCCCC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 86899995475999876167775411047976569
|
| >d1luca_ c.1.16.1 (A:) Bacterial luciferase alpha chain, LuxA {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Bacterial luciferase-like family: Bacterial luciferase (alkanal monooxygenase) domain: Bacterial luciferase alpha chain, LuxA species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=0 Score=26720.03 Aligned_cols=1 Identities=0% Similarity=-0.957 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 M~fg~f~~~~~~~~~~~~~~~~~~~~~a~~ae~~Gf~~~~~~ehh~~~~~~~~~p~~~~a~~a~~T~~I~lgt~v~~~~~ 80 (355)
T d1luca_ 1 MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNVGTAAIVLPT 80 (355)
T ss_dssp CEEEEEECCCCCTTCCHHHHHHHHHHHHHHTGGGTCSEEEECCCCSBTTBCCSCHHHHHHHHHHHCSSCEEEEEEEEGGG
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 91357668879999799999999999999999879989996235788877767999999999996791068542367887
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~P~~~A~~~atLd~ls~GR~~lGig~G~~~~~~~~~G~~~~~~~~~~~E~~~il~~l~~~~~~~~~G~~~~~~~~~~~P 160 (355)
T d1luca_ 81 AHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNP 160 (355)
T ss_dssp SCHHHHHHHHHHHHHHHTSCEEEEEECCCCHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHSEEEEESSSCEEEEEECSS
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 65999999998887626997146542034300343210121001101578888887520243322222344444322366
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~p~q~~~~Pi~~a~~sp~~~~~Aa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~~~~~v~~~~e~A~ 240 (355)
T d1luca_ 161 SAYTQGGAPVYVVAESASTTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAK 240 (355)
T ss_dssp CCSSTTSSCEEECCCSHHHHHHHHHTTCCBEECSSSCHHHHHHHHHHHHHHHHHTTCCGGGCCCEEEEECEECSSHHHHH
T ss_pred CCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 43567888620120322789999985067644354203331127899999887622454333210010011467799999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGtpe~v~~~l~~~~e~~Gv 320 (355)
T d1luca_ 241 DICRNFLGHWYDSYVNATKIFDDSDQTKGYDFNKGQWRDFVLKGHKDTNRRIDYSYEINPVGTPEECIAIIQQDIDATGI 320 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-----------------------------CCSGGGGGSSEESHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCC
T ss_conf 99999999999986421013576132125421102344555403501678887427741564899999999999997599
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
.
T Consensus 321 d~~~l~~~~~~~~~~~~~sl~lfae~V~P~lr~~~ 355 (355)
T d1luca_ 321 DNICCGFEANGSEEEIIASMKLFQSDVMPYLKEKQ 355 (355)
T ss_dssp CEEEEECGGGCSHHHHHHHHHHHHHHTGGGCCCCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 97999788999999999999999984101124899
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26719.24 Aligned_cols=1 Identities=0% Similarity=-0.495 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRg 80 (355)
T d1jbqa_ 1 WIRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRI 80 (355)
T ss_dssp CCCTTSCCCCCCCTTSCGGGCCSCCCCCCCCCSEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHH
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCCCHHHHH
T ss_conf 98899998865548986888997666776556410318775489973788643277599977999977889755979999
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 a~~~i~~a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~ 160 (355)
T d1jbqa_ 81 SLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPES 160 (355)
T ss_dssp HHHHHHHHHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CC
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHH
T ss_conf 99999999972886667669972555400488999986257708996123168899999844976999216643101555
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 161 HVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 34699999973356513444576532001005650034441389998568622587037788888752487536986325
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~gs~~~~~~~~~~~~~~~~~i~gi~~~~~~~~~~~~~~~~~~~v~D~ea~~~~~~L~~~eGi~vepSsaa~laa~l~~~~ 320 (355)
T d1jbqa_ 241 EGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQ 320 (355)
T ss_dssp TTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHH
T ss_conf 67720133333322334522355456620111100120220358989999999999998095982899999999999977
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~g~~VVvvlcd~G~kY~s~~~~d~~~~~~~~~ 355 (355)
T d1jbqa_ 321 ELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFL 355 (355)
T ss_dssp GCCTTCEEEEEECBBGGGGTTTTTCHHHHHHTTCC
T ss_pred HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 60896989999777976235642689999877899
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=26718.13 Aligned_cols=1 Identities=0% Similarity=-0.427 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~ 80 (355)
T d2b1pa1 1 NQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80 (355)
T ss_dssp CCEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCEEEEECCCCEEECCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99879995894045337759988962175859999999999989999998823369799999999999998648987648
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl 160 (355)
T d2b1pa1 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 99897025643457626999841446778765038999999999999999998865221124567763211365443132
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~ 240 (355)
T d2b1pa1 161 LDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_dssp CCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ECHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH
T ss_conf 01023211466655332214655558133147777877433356625789865989988897788999999720589879
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~ 320 (355)
T d2b1pa1 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 320 (355)
T ss_dssp HHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 99876566777764175435666421264333543210133379999999999876994579089999669420878881
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (355)
T d2b1pa1 321 AEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 355 (355)
T ss_dssp HHHTCCCC-------CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCC
T ss_conf 00458999877702332415999999999998629
|
| >d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine transglycosylase, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: tRNA-guanine transglycosylase family: tRNA-guanine transglycosylase domain: Archaeosine tRNA-guanine transglycosylase, N-terminal domain species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=0 Score=26717.41 Aligned_cols=1 Identities=0% Similarity=-0.593 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~m~~F~i~~~d~~AR~G~l~~~~g~i~TP~fmpv~t~~~v~~~p~~l~~~g~~iil~NtYhl~~~p~~~~~~~~gGLh~F 80 (355)
T d1iq8a1 1 KMLKFEIKARDGAGRIGKLEVNGKKIETPAIMPVVNPKQMVVEPKELEKMGFEIIITNSYIIYKDEELRRKALELGIHRM 80 (355)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTEEEEESEEEEBCCSSSCSSCHHHHHHTTCCEEEEEHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCEEEEEECCEEEECCCEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCEEEECCCCHHHH
T ss_conf 95689998611772248999699666089155654587401489999983899892111306789873443124770443
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~w~~~ilTDSGgfQv~sl~~~~~~~e~~i~~q~~lgsDI~m~lD~~~~~~~~~~~~~~s~~rt~~~~~~~~~~~~~~~~ 160 (355)
T d1iq8a1 81 LDYNGIIEVDSGSFQLMKYGSIEVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAVKELEITLSRAREAEEIKEIPMN 160 (355)
T ss_dssp HTCCSEEEEECSTTHHHHSSCCSSCHHHHHHHHHHTTCSBBCCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHCCSCBB
T ss_pred HCCCCCEECCCCCCEEECCCHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02789623055663121120011244566201204576179840346787777999999999999988887653205642
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 givqGG~~~dLR~~sa~~l~~~~~dG~aiGG~~~~~~~~~~~~~~~~i~~~~~~Lp~~kPrylmGvG~P~di~~~v~~Gi 240 (355)
T d1iq8a1 161 ATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVISSKMALRPDRPVHLFGAGHPIVFALAVAMGV 240 (355)
T ss_dssp CCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHHHHHHSCTTSCEEETTCCCGGGHHHHHHTTC
T ss_pred CEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCC
T ss_conf 00012257317699986654178103201166765204789999998864101486336444137887567999998558
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 D~FD~~~p~r~ar~g~~~t~~g~~~l~~~d~~pC~C~~C~~~srayl~HL~~~~e~~LltiHNl~~~~~l~~~iR~aI~~ 320 (355)
T d1iq8a1 241 DLFDSASYALYAKDDRYMTPEGTKRLDELDYFPCSCPVCSKYTPQELREMPKEERTRLLALHNLWVIKEEIKRVKQAIKE 320 (355)
T ss_dssp CEEEESHHHHHHHTTEEEETTEEEEGGGCSSCCCCSTTTTTCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 96520588887640332157885235411013457852140589999976346488999999999999999999999985
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
.
T Consensus 321 g~f~~~~e~~~~~~p~~~~~~~~l~~~~~~~~~~~ 355 (355)
T d1iq8a1 321 GELWRLVDERARSHPKLYSAYKRLLEHYTFLEEFE 355 (355)
T ss_dssp TCHHHHHHHHHTTCHHHHHHHHHHHHCHHHHHHHS
T ss_pred CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999869999999999998888875019
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=26716.94 Aligned_cols=1 Identities=0% Similarity=-1.257 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
-
T Consensus 1 ~~p~~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~ 80 (355)
T d1nexb2 1 FVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWD 80 (355)
T ss_dssp CCCEEEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEE
T ss_pred CCCCCEEECCCCCCCEEEEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCC
T ss_conf 98875888983788699999889999999189909999899993999997899988999986999999996452443211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d1nexb2 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160 (355)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEEC
T ss_conf 11111111110011111111111112322045543888689998567730012465200010000011234012101100
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 240 (355)
T d1nexb2 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240 (355)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC
T ss_conf 22210000256334421144204443013110001100012332111111210021012456368763012211111111
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~ 320 (355)
T d1nexb2 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANI 320 (355)
T ss_dssp CCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCT
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEEE
T ss_conf 11111111123210033320111111111111110001246882299998499989999809979999999997988884
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
+
T Consensus 321 ~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~dfs 355 (355)
T d1nexb2 321 LKDADQIWSVNFKGKTLVAAVEKDGQSFLEILDFS 355 (355)
T ss_dssp TTTCSEEEEEEEETTEEEEEEESSSCEEEEEEECC
T ss_pred CCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECC
T ss_conf 58999899999839919999989890999999588
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=0 Score=26716.38 Aligned_cols=1 Identities=0% Similarity=-0.925 Sum_probs=0.0
Q ss_pred C-------------------------------------------------------------------------------
Q ss_conf 7-------------------------------------------------------------------------------
Q 001738 682 S------------------------------------------------------------------------------- 682 (1019)
Q Consensus 682 ~------------------------------------------------------------------------------- 682 (1019)
.
T Consensus 1 ~~p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 99717476589999999982664777671999999999499999899998569948999999996777642015899989
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 99999999798898058864031179873499933887157732798820454305788376677058740473069963
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 240 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA 240 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHH
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCC
T ss_conf 69993899989998347873799962433300011061021538997388746998299996589907998445784412
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 001738 683 -------------------------------------------------------------------------------- 682 (1019)
Q Consensus 683 -------------------------------------------------------------------------------- 682 (1019)
T Consensus 241 ~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~ 320 (355)
T d2bbkh_ 241 ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 320 (355)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET
T ss_pred EEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEC
T ss_conf 68543303510899980799767887406871265179975999867888498996689987799992899969999978
Q ss_pred ----------------------------------C
Q ss_conf ----------------------------------8
Q 001738 683 ----------------------------------V 683 (1019)
Q Consensus 683 ----------------------------------~ 683 (1019)
.
T Consensus 321 ~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp TTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCC
T ss_conf 99989999999998999992869796589969999
|