Query 001743
Match_columns 1018
No_of_seqs 438 out of 3589
Neff 8.1
Searched_HMMs 29240
Date Tue Mar 26 15:49:20 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001743.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1042-1045//hhsearch_pdb/001743hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 1.0 1 1 1233.2 91.1 875 117-1015 54-1019(1034)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 1216.6 82.3 875 117-1015 49-1013(1028)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 1194.1 88.3 884 117-1015 6-988 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 1091.7 61.7 801 119-1016 70-878 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 1067.0 -16.5 812 119-1015 17-840 (885)
6 3j09_A COPA, copper-exporting 1.0 1 1 756.2 33.7 674 42-866 13-714 (723)
7 3rfu_A Copper efflux ATPase; a 1.0 1 1 741.5 48.4 576 158-863 128-731 (736)
8 3j08_A COPA, copper-exporting 1.0 1 1 709.1 44.1 571 159-865 47-635 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 257.3 0.0 260 426-816 4-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 211.7 21.9 278 426-814 8-287 (287)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=1233.20 Aligned_cols=875 Identities=28% Similarity=0.392 Sum_probs=737.6
Q ss_pred HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
Q ss_conf 71698799988199948999910999999997229985688998729999999995557999999999998752002---
Q 001743 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (1018)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~a~is~~~~~~~--- 193 (1018)
+...++++++.|++++..||++++ +.+|+++||+|++++++.+++|+.++++|++++.++++++++++++.+...
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 449999999985979121979999--999998509998999899988999999984738999999999999999874034
Q ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEEE
Q ss_conf 699--988412589999999999999999999999999967241698489997995999761784337199956998410
Q 001743 194 EGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP 271 (1018)
Q Consensus 194 ~g~--~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~~LvvGDiI~l~~Gd~vP 271 (1018)
..+ ...|++++.+++.+++..++..+.+++.++..++|.+ ..+.+++|+|||++++|+++||||||||.|++||+||
T Consensus 132 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~-l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VP 210 (1034)
T 3ixz_A 132 GDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKN-LVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVP 210 (1034)
T ss_pred CCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEC
T ss_conf 777654420564243013227999999999999999999762-4897359999998999888987988589985796435
Q ss_pred CCEEEEEECCEEEEECCCCCCCCCCCCCCC---------CCEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 127999425316872145699984124899---------98677124897162989999981320243688431379999
Q 001743 272 ADGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (1018)
Q Consensus 272 aDgili~g~~l~VDeS~LTGEs~pv~k~~~---------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 342 (1018)
|||++++|+++.||||+|||||.|+.|..+ .+.+|+||.|.+|.++++|++||++|++|++++++.+.+.+
T Consensus 211 AD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~ 290 (1034)
T 3ixz_A 211 ADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE 290 (1034)
T ss_pred CCEEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCC
T ss_conf 87699970880588336678877766557776656323445122040698604249999602543740899862035667
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98279999999999999989999999999988776530357875456886737899999999876553236625899999
Q 001743 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (1018)
Q Consensus 343 ~tplq~~l~~~a~~i~~~~l~~a~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLplavtl 422 (1018)
++|+|+++++++..+..+++.++++++++++.. +. .+...+..++++++++||||||+++|+
T Consensus 291 ~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~l~v~~iPe~Lp~~vti 352 (1034)
T 3ixz_A 291 KTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------GY----------TFLRAMVFFMAIVVAYVPEGLLATVTV 352 (1034)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CC----------HHHHHHHHHHHHHHHEECCCCHHHHHH
T ss_conf 891899999999999999999999999999996--------41----------299999999999882026650899999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999721732324502332027806897076675566863999999838255406999988889999936999999
Q 001743 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (1018)
Q Consensus 423 ~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1018)
++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.++|..+..+..+...................+.
T Consensus 353 ~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (1034)
T 3ixz_A 353 CLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALC 432 (1034)
T ss_pred HHHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999998733882864767888615872997289787236837999999779512256766656655676778999999
Q ss_pred HHHHHCCCCEEEECCCC----CEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECC---CC
Q ss_conf 99985288407741798----324639916899999999809992877420422787088899843899998089---93
Q 001743 503 QSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE---GG 575 (1018)
Q Consensus 503 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~---~~ 575 (1018)
..+++|+++....+++. .....|+|+|.|+++++...+.+....+..+++++.+||+|+||+|++++..++ ++
T Consensus 433 ~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~ 512 (1034)
T 3ixz_A 433 RVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512 (1034)
T ss_pred HHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 99887162665357677766574355492599999999985788688897486069950357772689999833788860
Q ss_pred EEEEECCCHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--------CCCCCCCC
Q ss_conf 7999827048999750111257991520899899999999999987134367553210278888--------89999887
Q 001743 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTE 647 (1018)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~--------~~~~~~~~ 647 (1018)
+.+++|||||.++++|+.+.. +|...|++++.++.+.+..++++.+|+|++++|||+++.+.. +..+..++
T Consensus 513 ~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~ 591 (1034)
T 3ixz_A 513 HVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTS 591 (1034)
T ss_pred EEEEEECCHHHHHHHHHHHHC-CCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHHHHHCCCC
T ss_conf 899996884999997377552-8964019999999999999998714758236867855800043211245344302224
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC-----------------------
Q ss_conf 505876653037898873999999987899899994899989999999919866994-----------------------
Q 001743 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------- 704 (1018)
Q Consensus 648 ~l~lig~i~i~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ia~~~Gi~~~~~----------------------- 704 (1018)
|++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|+..++.
T Consensus 592 ~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 671 (1034)
T 3ixz_A 592 GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDAR 671 (1034)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCC
T ss_conf 86798887136887065999999999869969999699779999999986999887247888887617650002544543
Q ss_pred -EEEECCCCCCCCHHHHHHHHCCC--EEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCH
Q ss_conf -36508100247999996340233--067311831389999999873599899967998894544206900540688838
Q 001743 705 -IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (1018)
Q Consensus 705 -~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~~p~~K~~~v~~l~~~~g~~V~~~GDG~ND~~al~~Advgiamg~~g~~ 781 (1018)
.+++|.++..+.++++.+.+.+. .+|+|++|+||..+++.+|+. |++|+|+|||.||+|||++||+|||||++|+|
T Consensus 672 ~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d 750 (1034)
T 3ixz_A 672 ACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750 (1034)
T ss_pred EEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHCCEEEEECCCCCH
T ss_conf 16771676663899999999873782699966989999999999976-99999987957769999978932980775679
Q ss_pred HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 88740587613599048999999989999999999999999999999999987520699864699999988677678674
Q 001743 782 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGAL 861 (1018)
Q Consensus 782 ~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~inli~d~l~al 861 (1018)
.+|++||+++.++++++|+.++++||.+|+||+|+++|++++|+..++..+++.+++.+.||+++|+||+|+++|++|++
T Consensus 751 ~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~pal 830 (1034)
T 3ixz_A 751 AAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSV 830 (1034)
T ss_pred HHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99985499966688339999999988999999999999999999999999999998214668999999999998888888
Q ss_pred HCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHH-HHHHHHHHHHHHHHH-----C---CCCCCCCC-------CC---
Q ss_conf 4056898842325788899-897767799999999-999999999999881-----2---21235799-------99---
Q 001743 862 ALATEPPNGDLMKRSPVGR-KGNFISNVMWRNILG-QSLYQFLIIWYLQTR-----G---KAVFRLDG-------PD--- 921 (1018)
Q Consensus 862 aLa~e~p~~~lm~~~P~~~-~~~li~~~~~~~i~~-~~~~~~~~~~~l~~~-----~---~~~~~~~~-------~~--- 921 (1018)
+|++|||++++|+|||+.+ +++++++.++...+. .++++++..++.+|. | ..+++... .+
T Consensus 831 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 910 (1034)
T 3ixz_A 831 SLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQD 910 (1034)
T ss_pred HHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 85168897326647998975344557889999999999999999999999999636776200001112223344443101
Q ss_pred -------------CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHHHHH--HHHHHHHCC
Q ss_conf -------------0122235888899998763302330234432224-660359999999999999999--987642200
Q 001743 922 -------------PDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLFQII--IIELLGTFA 985 (1018)
Q Consensus 922 -------------~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~q~~--~v~~~~~~~ 985 (1018)
.....+|+.|+++|++|+||.+++|. ++.++|+ ++++|+++++.++.++++|++ ++|+++.+|
T Consensus 911 ~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~-~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f 989 (1034)
T 3ixz_A 911 SYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKT-RRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIF 989 (1034)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 112111011100000257989999999999999983126-8876542677536899999999999999999826677775
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 557889888999999999999999997571
Q 001743 986 NTTPLNLQQWFVSILLGFLGMPIAAVLKLI 1015 (1018)
Q Consensus 986 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i 1015 (1018)
++.|+++.+|+++++++++.++++++.|++
T Consensus 990 ~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~ 1019 (1034)
T 3ixz_A 990 NFMPIRFQWWLVPMPFGLLIFVYDEIRKLG 1019 (1034)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 678898999999999999999999999999
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=1216.62 Aligned_cols=875 Identities=28% Similarity=0.389 Sum_probs=737.5
Q ss_pred HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CC
Q ss_conf 71698799988199948999910999999997229985688998729999999995557999999999998752002-69
Q 001743 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT-EG 195 (1018)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~a~is~~~~~~~-~g 195 (1018)
+..+++++++.|+++...||++++ +.+|+++||+|.+++++.+|+|+.++++|+++++++|++++++|++.+... .+
T Consensus 49 ~~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 126 (1028)
T 2zxe_A 49 HKLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAAT 126 (1028)
T ss_dssp SSSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 549999999996869467989999--999998669997999999989999999997089999999999999998751134
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEEE
Q ss_conf 99884125899999999999999999999999----99967241698489997995999761784337199956998410
Q 001743 196 WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ----FKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP 271 (1018)
Q Consensus 196 ~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~----~~~l~~~~~~~~v~ViR~G~~~~I~~~~LvvGDiI~l~~Gd~vP 271 (1018)
....|.+.....++++++++++++.++.|+++ .++|.+ ..+..++|+|||++++|+++||||||||.+++||+||
T Consensus 127 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IP 205 (1028)
T 2zxe_A 127 EDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIP 205 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEE
T ss_conf 566652007999898988889999999999999999999885-2787269998999999988897867779989979841
Q ss_pred CCEEEEEECCEEEEECCCCCCCCCCCCCCCC---------CEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 1279994253168721456999841248999---------8677124897162989999981320243688431379999
Q 001743 272 ADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (1018)
Q Consensus 272 aDgili~g~~l~VDeS~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 342 (1018)
|||++++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|++++++.+++.+
T Consensus 206 aD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 285 (1028)
T 2zxe_A 206 ADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVG 285 (1028)
T ss_dssp SEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCC
T ss_pred CEEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCC
T ss_conf 22899960858998675678876344346778888445335487374697016999999845143988999860378878
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98279999999999999989999999999988776530357875456886737899999999876553236625899999
Q 001743 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (1018)
Q Consensus 343 ~tplq~~l~~~a~~i~~~~l~~a~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLplavtl 422 (1018)
++|+|+.+++++.++..++++++++++++++. . +. .+...+.+++++++++||||||+++|+
T Consensus 286 ~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~~~~~i~llv~~iP~~Lp~~vti 347 (1028)
T 2zxe_A 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEAVIFLIGIIVANVPEGLLATVTV 347 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHHHHHHHHHHHHHSCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-----CC----------CHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 89289999999999999999999999999997---3-----67----------699999999999999747417999999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999721732324502332027806897076675566863999999838255406999988889999936999999
Q 001743 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (1018)
Q Consensus 423 ~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (1018)
++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+.............+...+.+.
T Consensus 348 ~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 427 (1028)
T 2zxe_A 348 CLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALS 427 (1028)
T ss_dssp HHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999855891644456766414762995168888887738999999898465136777765544466778999999
Q ss_pred HHHHHCCCCEEEECCCC----CEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEEC---CCC
Q ss_conf 99985288407741798----32463991689999999980999287742042278708889984389999808---993
Q 001743 503 QSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGG 575 (1018)
Q Consensus 503 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~---~~~ 575 (1018)
...++||++.++.+.++ ..+..|+|+|.|+++++...+.+....+..+++++.+||+|+||+|+++++.+ +++
T Consensus 428 ~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~ 507 (1028)
T 2zxe_A 428 RIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507 (1028)
T ss_dssp HHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCC
T ss_pred HHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCC
T ss_conf 99986578765047777766453007894099999999995898889887482678704476666479999405788871
Q ss_pred EEEEECCCHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--------CCCCCCCC
Q ss_conf 7999827048999750111257991520899899999999999987134367553210278888--------89999887
Q 001743 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTE 647 (1018)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~--------~~~~~~~~ 647 (1018)
+.+++|||||.++++|+.+. .+|...+++++.++.+.+..++++++|+|++++|||+++.+.. +.....+.
T Consensus 508 ~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~ 586 (1028)
T 2zxe_A 508 YLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTT 586 (1028)
T ss_dssp EEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCS
T ss_pred EEEEEECCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 79999388289998745653-38972128889999999999999855997999998746822134201246245555543
Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC------------------------
Q ss_conf 50587665303789887399999998789989999489998999999991986699------------------------
Q 001743 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------ 703 (1018)
Q Consensus 648 ~l~lig~i~i~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ia~~~Gi~~~~------------------------ 703 (1018)
|++|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|++|||...+
T Consensus 587 ~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 666 (1028)
T 2zxe_A 587 DLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAK 666 (1028)
T ss_dssp SEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 80998651157899844899999999869979998899779999999986988788336777776418632221555662
Q ss_pred CEEEECCCCCCCCHHHHHHHHCCCE--EEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCH
Q ss_conf 4365081002479999963402330--67311831389999999873599899967998894544206900540688838
Q 001743 704 GIAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (1018)
Q Consensus 704 ~~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~~p~~K~~~v~~l~~~~g~~V~~~GDG~ND~~al~~Advgiamg~~g~~ 781 (1018)
..+++|.++..+.++++.+.+.+.. +|+|++|+||..+|+.+|+. |++|+|+|||.||+|||++||+|||||++|+|
T Consensus 667 ~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd 745 (1028)
T 2zxe_A 667 ACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745 (1028)
T ss_dssp EEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCH
T ss_pred EEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHCCCEEEECCCCCH
T ss_conf 69988088564799999999862796799985888999999999968-99899985885339999868911996776588
Q ss_pred HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 88740587613599048999999989999999999999999999999999987520699864699999988677678674
Q 001743 782 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGAL 861 (1018)
Q Consensus 782 ~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~inli~d~l~al 861 (1018)
++|++||+++.+|+|++|++++++||.+|+||+|++.|++++|+..+...+++.++..+.|++++|++|+|+++|.+|++
T Consensus 746 ~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~ 825 (1028)
T 2zxe_A 746 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAI 825 (1028)
T ss_dssp HHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHH
T ss_pred HHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 89985489955798779999999999999999999999999999999999999997666445799999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHH-HHHHHHHHHHHHHHHHHH-----CC---C-------CCCCCCC----
Q ss_conf 405689884232578889989-7767799999-999999999999999881-----22---1-------2357999----
Q 001743 862 ALATEPPNGDLMKRSPVGRKG-NFISNVMWRN-ILGQSLYQFLIIWYLQTR-----GK---A-------VFRLDGP---- 920 (1018)
Q Consensus 862 aLa~e~p~~~lm~~~P~~~~~-~li~~~~~~~-i~~~~~~~~~~~~~l~~~-----~~---~-------~~~~~~~---- 920 (1018)
+|++|||++++|+|||+.++. +++++.++.. ++..+++++++.++.++. |. . ++.....
T Consensus 826 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 905 (1028)
T 2zxe_A 826 SLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVED 905 (1028)
T ss_dssp HGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEEC
T ss_pred HHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCC
T ss_conf 86028661456515999952134527999999999999999999999999987406766201310220010356542113
Q ss_pred ---C---------CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--HHHHHCCC
Q ss_conf ---9---------012223588889999876330233023443222466035999999999999999998--76422005
Q 001743 921 ---D---------PDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIII--ELLGTFAN 986 (1018)
Q Consensus 921 ---~---------~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~q~~~v--~~~~~~~~ 986 (1018)
. .....+|++|+++|++|+||.+++|. ++.++|+..++|++++..+++++++|++++ |+++.+|+
T Consensus 906 ~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~ 984 (1028)
T 2zxe_A 906 SFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKT-RRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALR 984 (1028)
T ss_dssp TTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-SSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 455322234444566678899999999999999998746-8751101577688999999999999999998656776421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 57889888999999999999999997571
Q 001743 987 TTPLNLQQWFVSILLGFLGMPIAAVLKLI 1015 (1018)
Q Consensus 987 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~i 1015 (1018)
++|+++.+|+++++++++.++++++.|++
T Consensus 985 ~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 985 MYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013 (1028)
T ss_dssp CCCCCGGGGGTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88899999999999999999999999999
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=1194.13 Aligned_cols=884 Identities=29% Similarity=0.425 Sum_probs=737.9
Q ss_pred HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 71698799988199948999910999999997229985688998729999999995557999999999998752002699
Q 001743 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (1018)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~a~is~~~~~~~~g~ 196 (1018)
+...++++++.|+++...||+.++ +.+|+++||+|.++.++.+++|+.++++|++++++++++++++|+++++...+.
T Consensus 6 ~~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 6 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 548999999985899666989999--999997568873289889869999999998899999999999999988602566
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE--EEEEECCCCCCCCEEEECCCCEEEC
Q ss_conf --988412589999999999999999999999999967241698489997995--9997617843371999569984101
Q 001743 197 --PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRKISIYDLLPGDIVHLCMGDQVPA 272 (1018)
Q Consensus 197 --~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~ViR~G~--~~~I~~~~LvvGDiI~l~~Gd~vPa 272 (1018)
...|+|++.+++.+++...+..+.+++.+++.++|.+ ..+.+++|+|||+ .++|+++||||||+|.+++||+|||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCC
T ss_conf 540347876886678899999999999999999999871-0897389993798647997899987787899889784354
Q ss_pred CEEEEEE--CCEEEEECCCCCCCCCCCCCCCC------------CEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 2799942--53168721456999841248999------------867712489716298999998132024368843137
Q 001743 273 DGLFVSG--FSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (1018)
Q Consensus 273 Dgili~g--~~l~VDeS~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (1018)
||+++++ .+|.||||+|||||.|+.|..+. +++|+||.|.+|.++++|++||.+|++|++++++.+
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred CEEEEEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 48999885043999825246887633400456677666755545467618789844589999976722198999997325
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99999827999999999999998999999999998877653035787545688673789999999987655323662589
Q 001743 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (1018)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLpl 418 (1018)
++.+++|+|+++++++.++.++++.+++++++++...+ . ....+. .| ...+..+|..++++++++||||||+
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~--~~----~~~~~~~~~~ai~l~v~aiP~~Lp~ 314 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-N-DPVHGG--SW----IRGAIYYFKIAVALAVAAIPEGLPA 314 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG-G-SCSSSS--CH----HHHHHHHHHHHHHHHHHHSCTTHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCCCC--HH----HHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 78789938999999999999999999999999999874-1-433464--07----9999999999999999866760489
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEE---------EECCCCCCCCC
Q ss_conf 999999999999721732324502332027806897076675566863999999838255---------40699998888
Q 001743 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK---------EVDNSKGTPAF 489 (1018)
Q Consensus 419 avtl~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~---------~~~~~~~~~~~ 489 (1018)
++|++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+ ..+.....+..
T Consensus 315 ~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 394 (995)
T 3ar4_A 315 VITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEG 394 (995)
T ss_dssp HHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCC
T ss_pred HHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 99999999999844178486134155550383399765888766585699999834755676554302540477768863
Q ss_pred C--------CCCCHHHHHHHHHHHHHCCCCEEEECC-CCCEEECCCHHHHHHHHHHHHCCC-C--HH-------------
Q ss_conf 9--------999936999999999852884077417-983246399168999999998099-9--28-------------
Q 001743 490 G--------SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGG-D--FQ------------- 544 (1018)
Q Consensus 490 ~--------~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~a~~~~~-~--~~------------- 544 (1018)
. .....+....+....++|+++.+..++ ++..+..|+|+|.|++.++.+.|. + ..
T Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~ 474 (995)
T 3ar4_A 395 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNS 474 (995)
T ss_dssp CEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 10136643444455899999999987488805656889832554796479999999983996410001342010121015
Q ss_pred HHHHHCCEEEEECCCCCCCEEEEEEEECCC-----CEEEEECCCHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 774204227870888998438999980899-----379998270489997501112579915208998999999999999
Q 001743 545 AERQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619 (1018)
Q Consensus 545 ~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~ 619 (1018)
..+..+++++.+||+|+||||+++++.+++ ++++|+|||||.|+++|+.+.. ++...|++++.++.+.+.++++
T Consensus 475 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 553 (995)
T 3ar4_A 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEW 553 (995)
T ss_dssp HHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHC-CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 566417457774048888756999834898766644499975887999985405442-8973249999999999999987
Q ss_pred --HHHHHHHHHHHHHCCCCCCCCC-------CCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf --8713436755321027888889-------9998875058766530378988739999999878998999948999899
Q 001743 620 --ASEALRTLCLACMEIGNEFSAD-------APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTA 690 (1018)
Q Consensus 620 --a~~glr~l~~A~k~~~~~~~~~-------~~~~~~~l~lig~i~i~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta 690 (1018)
+++|+|++++|||+++...... ....|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||
T Consensus 554 ~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta 633 (995)
T 3ar4_A 554 GTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTA 633 (995)
T ss_dssp HHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred HHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
T ss_conf 76305614889999834765111222340244553069489999852588966699999999986998999899978999
Q ss_pred HHHHHHCCCCCCC----CEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHH
Q ss_conf 9999991986699----436508100247999996340233067311831389999999873599899967998894544
Q 001743 691 KAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (1018)
Q Consensus 691 ~~ia~~~Gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~~v~~l~~~~g~~V~~~GDG~ND~~al 766 (1018)
.++|++|||...+ +.+++|.++..+.++++.+.+.+..+|+|++|+||..+|+.+|++ |++|+|+|||.||+|||
T Consensus 634 ~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 634 IAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPAL 712 (995)
T ss_dssp HHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHH
T ss_conf 99999839677887535348983664628999999987537389970899999999999977-99799983881449999
Q ss_pred HCCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 20690054068883888740587613599048999999989999999999999999999999999987520699864699
Q 001743 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAV 846 (1018)
Q Consensus 767 ~~Advgiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~ 846 (1018)
++||+||||| +|+++++++||+++.+|+|.++++++++||++|+||+|+++|++++|+..++..+++++++.+.||+++
T Consensus 713 k~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~ 791 (995)
T 3ar4_A 713 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPV 791 (995)
T ss_dssp HHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHH
T ss_pred HHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 8789679967-889999973889977787789999999989999999999999999999999999999998476257899
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--HHH--CCC-----CCCC
Q ss_conf 9999886776786744056898842325788899897767799999999999999999999--881--221-----2357
Q 001743 847 QLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYL--QTR--GKA-----VFRL 917 (1018)
Q Consensus 847 qll~inli~d~l~alaLa~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l--~~~--~~~-----~~~~ 917 (1018)
|++|+|+++|.+|+++|++|||++++|+|||+.++++++++.++..++.+++++..+.+.. ++. ... +...
T Consensus 792 qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (995)
T 3ar4_A 792 QLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQL 871 (995)
T ss_dssp HHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 99999999988777763067777568737999976454489999999999999999999999999985156654330000
Q ss_pred ------CC--C-------C--CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHHHHH--H
Q ss_conf ------99--9-------9--0122235888899998763302330234432224-660359999999999999999--9
Q 001743 918 ------DG--P-------D--PDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLFQII--I 977 (1018)
Q Consensus 918 ------~~--~-------~--~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~q~~--~ 977 (1018)
.+ . . .....+|++|+++|++|+||.+|+|.. +.++|+ +.++|+++++.+++.+++|++ +
T Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~-~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~ 950 (995)
T 3ar4_A 872 THFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSE-NQSLMRMPPWVNIWLLGSICLSMSLHFLILY 950 (995)
T ss_dssp GGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCS-SCCTTTSCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 011223444333343322100101356599999999999999986025-5431005775479999999999999999998
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 87642200557889888999999999999999997571
Q 001743 978 IELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 1015 (1018)
Q Consensus 978 v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i 1015 (1018)
+++++.+|++.|+++.+|+++++++++.++++++.|++
T Consensus 951 ~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 988 (995)
T 3ar4_A 951 VDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988 (995)
T ss_dssp STHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88777761157899999999999999999999999999
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1091.67 Aligned_cols=801 Identities=21% Similarity=0.338 Sum_probs=654.2
Q ss_pred CCHHH-HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 69879-99881999489999109999999972299856889987299999999955579999999999987520026999
Q 001743 119 GGVEG-IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP 197 (1018)
Q Consensus 119 ~gv~~-l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~a~is~~~~~~~~g~~ 197 (1018)
+++.+ ++..|+++...||++++ +.+|+++||+|++++++ +++|..++++|+++..++++++++++++++
T Consensus 70 ~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g------- 139 (920)
T 1mhs_A 70 GGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE------- 139 (920)
T ss_dssp HHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------
T ss_pred CCCCHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_conf 76203689985899579999999--99999963998158888-889999999998799999999999999997-------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEEECCEEEE
Q ss_conf 88412589999999999999999999999999967241698489997995999761784337199956998410127999
Q 001743 198 KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277 (1018)
Q Consensus 198 ~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~~LvvGDiI~l~~Gd~vPaDgili 277 (1018)
.|.|+..+++.+++..++..+.+|+.+++.++|.+. .+.+++|+|||++++|++++|||||+|.+++||+|||||+++
T Consensus 140 -~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll 217 (920)
T 1mhs_A 140 -DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIV 217 (920)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEE
T ss_conf -689999999999999999999999999999986335-998799998998999898995889789967797336656999
Q ss_pred EECC-EEEEECCCCCCCCCCCCCCCCCEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 4253-168721456999841248999867712489716298999998132024368843137999998279999999999
Q 001743 278 SGFS-VLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (1018)
Q Consensus 278 ~g~~-l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (1018)
+|++ +.||||+|||||.|+.|..++ .+|+||.+.+|.++++|++||.+|++|++.++++++..+++|+|+.+++++.+
T Consensus 218 ~g~~~l~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~ 296 (920)
T 1mhs_A 218 TDDAFLQVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTI 296 (920)
T ss_dssp EESSCCEEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCCCCEEECCCC-EEECCCEEECCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 45722320222247888646934798-63037669513599999995776788899887764246776499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99998999999999998877653035787545688673789999999987655323662589999999999999721732
Q 001743 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKA 436 (1018)
Q Consensus 357 i~~~~l~~a~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLplavtl~l~~~~~~l~~~~i 436 (1018)
+..+.+++++++++.+ + +... .+...+..++++++++||||||+++|++++.++.+|.++|+
T Consensus 297 l~~~~~~~~~i~~~~~---~------------~~~~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i 358 (920)
T 1mhs_A 297 LLILVIFTLLIVWVSS---F------------YRSN---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA 358 (920)
T ss_dssp HHHHHHHHHHHHHHTT---T------------TTTC---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHH---H------------HCCC---CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 9999999999999998---8------------4688---69999999999998767603777789999999999986883
Q ss_pred CCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 32450233202780689707667556686399999983825540699998888999993699999999985288407741
Q 001743 437 LVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516 (1018)
Q Consensus 437 lvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 516 (1018)
+||+++++|+||++++||||||||||+|+|+|.+++..+.. +++ +++ ...++|+... .
T Consensus 359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~----------------~~~--~ll-~~a~l~~~~~---~ 416 (920)
T 1mhs_A 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV----------------DPE--DLM-LTACLAASRK---K 416 (920)
T ss_dssp CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC----------------CCT--HHH-HHHHHSCCCS---S
T ss_pred EEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCC----------------CHH--HHH-HHHHHHCCCC---C
T ss_conf 87057135554367689977888755553169998506998----------------989--999-9999854776---6
Q ss_pred CCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCC
Q ss_conf 79832463991689999999980999287742042278708889984389999808993799982704899975011125
Q 001743 517 EGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596 (1018)
Q Consensus 517 ~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~~~~~KGa~e~il~~c~~~~~ 596 (1018)
. .+||+|.|+++++.+.+.. ...+..+++++.+||+|.+|+|+++++.++++...++|||||.++++|+.
T Consensus 417 -~-----~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~--- 486 (920)
T 1mhs_A 417 -K-----GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE--- 486 (920)
T ss_dssp -C-----SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC---
T ss_pred -C-----CCCHHHHHHHHHHHHCCCC-HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCC---
T ss_conf -6-----8985899999999964631-01013553357861167788599999967991899990879999986135---
Q ss_pred CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 79915208998999999999999871343675532102788888999988750587665303789887399999998789
Q 001743 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG 676 (1018)
Q Consensus 597 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~i~D~lR~~~~~aI~~l~~aG 676 (1018)
..+++++.++.+.+.+++++.+|+|++++||+. .+.+++++|+++++||+||+++++|+.|+++|
T Consensus 487 ----~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aG 551 (920)
T 1mhs_A 487 ----DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLG 551 (920)
T ss_dssp ----SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHT
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC-----------CCCCCEEEEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf ----678987889989999999986799799999832-----------66530788999973432101799999986257
Q ss_pred CEEEEECCCCHHHHHHHHHHCCCCC----CCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf 9899994899989999999919866----994365081002479999963402330673118313899999998735998
Q 001743 677 ITVRMVTGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752 (1018)
Q Consensus 677 i~v~m~TGD~~~ta~~ia~~~Gi~~----~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~~v~~l~~~~g~~ 752 (1018)
|+++|+|||+..||.++|+++||.. .+..+++|. ..++++++.+.+.+..+|+|++|+||..+|+.+|++ |++
T Consensus 552 I~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~ 628 (920)
T 1mhs_A 552 LSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYL 628 (920)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCC
T ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCCCHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHC-CCE
T ss_conf 44999838978999999998499965467541242276--558989999877518199983799999999999967-996
Q ss_pred EEEECCCCCCHHHHHCCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99967998894544206900540688838887405876135990489999999899999999999999999999999999
Q 001743 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (1018)
Q Consensus 753 V~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~ 832 (1018)
|+|+|||.||+|||++||+||||| +|+++++++||+++++|+|++|++++++||++|+||+|++.|+++.|+....+..
T Consensus 629 Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~ 707 (920)
T 1mhs_A 629 VAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLG 707 (920)
T ss_dssp CEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHCCCCCCCC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999828810099998578674056-4339999846807767977789999999999999999987889799999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 87520699864699999988677678674405689884232578889989776779999999999999999999988122
Q 001743 833 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGK 912 (1018)
Q Consensus 833 ~~~~~~~~~pl~~~qll~inli~d~l~alaLa~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~ 912 (1018)
+...+.+ .|+++.|++|+|+++|. |+++|++|+++.+ ++|+.++.+-+ +..++..+++.....++.++...
T Consensus 708 ~~~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~ 778 (920)
T 1mhs_A 708 LWIAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPKL----WGMSVLLGVVLAVGTWITVTTMY 778 (920)
T ss_dssp HHHHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSSC----SSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-CCCCHHHHHHHHHHHHH-HHHHHCCCCCCCC---CCCCCCHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999996-16879999999999877-7665135676434---58878408989----99999999999999999999999
Q ss_pred CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 12357999--9012223588889999876330233023443222466035999999999999999998764220055788
Q 001743 913 AVFRLDGP--DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPL 990 (1018)
Q Consensus 913 ~~~~~~~~--~~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~q~~~v~~~~~~~~~~~l 990 (1018)
.++..+. ......+|+.|++++++|+|+.+++|..+ ++|++. .|+++++.+++..++++++. +.+ +|++.|+
T Consensus 779 -~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~f~~~~l 852 (920)
T 1mhs_A 779 -AQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANG--PFWSSI-PSWQLSGAIFLVDILATCFT-IWG-WFEHSDT 852 (920)
T ss_dssp -TTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS--SCSCCS-CTHHHHHHHHHHHHHHHHHH-SSS-STTSCSH
T ss_pred -HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHCCC-HHHHHHHHHHHHHHHHHHHH-HHH-HHCCCCC
T ss_conf -83545653320667899999999999999999850360--540375-59999999999999999999-765-6316788
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 98889999999999999999975714
Q 001743 991 NLQQWFVSILLGFLGMPIAAVLKLIQ 1016 (1018)
Q Consensus 991 ~~~~w~~~~~~~~~~~~~~~~~k~ip 1016 (1018)
+|.+|+++++++++.+++.++.|++-
T Consensus 853 ~~~~~~~~~~~~~~~~~~~e~~k~~~ 878 (920)
T 1mhs_A 853 SIVAVVRIWIFSFGIFCIMGGVYYIL 878 (920)
T ss_dssp HHHTHHHHHHHTTHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1067.00 Aligned_cols=812 Identities=20% Similarity=0.303 Sum_probs=628.3
Q ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 69879998819994899991099999999722998568899872999999999555799999999999875200269998
Q 001743 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (1018)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~a~is~~~~~~~~g~~~ 198 (1018)
..++++.+.|+++ ..||++++ +.+|++.||+|+++.++ +++|+.++++|++++.++|+++++++++++.. ++.+.
T Consensus 17 ~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~-~~~~~ 91 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANG-DGRPP 91 (885)
T ss_dssp SSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC-TTSCS
T ss_pred CCHHHHHHHHCCC-CCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCC
T ss_conf 9999999983899-99989999--99999851997158878-87999999999999999999999999999704-56630
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEEECCEEEEE
Q ss_conf 84125899999999999999999999999999672416984899979959997617843371999569984101279994
Q 001743 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (1018)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~~LvvGDiI~l~~Gd~vPaDgili~ 278 (1018)
.|+|++.|++.+++...+..+.+++.+++.++|.+. .+.+++|+|||++++|++++|||||+|.+++||+|||||++++
T Consensus 92 ~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~-~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~ 170 (885)
T 3b8c_A 92 DWQDFVGIICLLVINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLE 170 (885)
T ss_dssp CCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTS-CSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEE
T ss_conf 188999999999999999999999999999997334-9986999999989998989979897899889999930359997
Q ss_pred ECCEEEEECCCCCCCCCCCCCCCCCEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 25316872145699984124899986771248971629899999813202436884313799999827999999999999
Q 001743 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (1018)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~ 358 (1018)
|++|.||||+|||||.|+.|..++ .+|+||.|.+|.++++|++||.+|++|++.+++++ ..+++|+|+.+++++.++.
T Consensus 171 g~~l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 171 GDPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SSCBCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCC-CCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHH
T ss_conf 675400344468888645834898-30267599511799999975730199999999864-6446849999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9-989999999999988776530357875456886737899999999876553236625899999999999997217323
Q 001743 359 K-IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKAL 437 (1018)
Q Consensus 359 ~-~~l~~a~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLplavtl~l~~~~~~l~~~~il 437 (1018)
. +++.+++++++++ +. .+. .+...+..++++++++|||+||+++++++++++.+|.++|++
T Consensus 249 ~~~~~~~~~~~~~~~----~~----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~il 310 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMY----PI----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 310 (885)
T ss_dssp HHHHHHHHHHSTTTT----TT----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHH----HH----CCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 999999999999999----98----068----------699999999999999703689999999999999999719869
Q ss_pred CCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 24502332027806897076675566863999999838255406999988889999936999999999852884077417
Q 001743 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (1018)
Q Consensus 438 vr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (1018)
||+++++|+||++++||||||||||+|+|+|.+.++. .+. ...++ .+++..+ +.|+..
T Consensus 311 vk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----------~~~~~--~~ll~~a-a~~~~~------ 368 (885)
T 3b8c_A 311 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----------KGVEK--DQVLLFA-AMASRV------ 368 (885)
T ss_dssp CSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSC-----------SSTTH--HHHHHHH-HHHCCS------
T ss_pred ECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEE--CCC-----------CCCCH--HHHHHHH-HHHHCC------
T ss_conf 6895188897679989987998761685279987775--158-----------99999--9999999-997278------
Q ss_pred CCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCC
Q ss_conf 98324639916899999999809992877420422787088899843899998089937999827048999750111257
Q 001743 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (1018)
Q Consensus 518 ~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (1018)
.++||+|.|+++++.+ ..+.+..+++++.+||+|.+|+|+++++..+++.+.++||+||.++++|+.
T Consensus 369 -----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~---- 435 (885)
T 3b8c_A 369 -----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA---- 435 (885)
T ss_dssp -----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC----
T ss_pred -----CCCCCHHHHHHHHHHC----HHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCC----
T ss_conf -----8999158999998646----365762483220135785225689999804896899994889999976458----
Q ss_pred CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 99152089989999999999998713436755321027888889999887505876653037898873999999987899
Q 001743 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (1018)
Q Consensus 598 ~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~i~D~lR~~~~~aI~~l~~aGi 677 (1018)
+++.++.+.+.+++++++|+|++++||++++.+. .+..+++++++|+++++||+||+++++|+.|+++||
T Consensus 436 -------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI 505 (885)
T 3b8c_A 436 -------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGV 505 (885)
T ss_dssp -------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTC
T ss_pred -------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC---CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
T ss_conf -------6445799999999998579869999994466433---111356757999999606661208999999997699
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCC--CCEEEECCCCCC-CCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 8999948999899999999198669--943650810024-7999996340233067311831389999999873599899
Q 001743 678 TVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVA 754 (1018)
Q Consensus 678 ~v~m~TGD~~~ta~~ia~~~Gi~~~--~~~vi~g~~~~~-~~~~~~~~~~~~~~v~ar~~p~~K~~~v~~l~~~~g~~V~ 754 (1018)
+++|+|||+..||.++|+++||..+ +..+++|.+++. ++++++++.+.+..+|+|++|+||..+|+.+|++ |++|+
T Consensus 506 ~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Va 584 (885)
T 3b8c_A 506 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVG 584 (885)
T ss_dssp CCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEE
T ss_conf 68999399869999999980976466775144555312224635799998638689887899999999999977-99699
Q ss_pred EECCCCCCHHHHHCCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96799889454420690054068883888740587613599048999999989999999999999999999999999987
Q 001743 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (1018)
Q Consensus 755 ~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~ 834 (1018)
|+|||.||+|||++||+||||| +|+|+++++||+++.+|+|++|++++++||++|+||+|++.|++++|+..++..+.
T Consensus 585 m~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~- 662 (885)
T 3b8c_A 585 MTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML- 662 (885)
T ss_dssp BCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHH-
T ss_pred EECCCCHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9759812299998699759957-71299998434013357666899999999999999999999999999999999999-
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 5206998646999999886776786744056898842325788899897767799999999999999999999881221-
Q 001743 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA- 913 (1018)
Q Consensus 835 ~~~~~~~pl~~~qll~inli~d~l~alaLa~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~- 913 (1018)
.....+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.++...+..++++++..+.+++.+..
T Consensus 663 ~~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 734 (885)
T 3b8c_A 663 IALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKT 734 (885)
T ss_dssp HHSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTT
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCC---CCC---CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9970386758899999999987778-74046546754---587---30358-9999999999999999999999999973
Q ss_pred -----CCCCCCCC-CHHHH-HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf -----23579999-01222-358888999987633023302344322246603599999999999999999876422005
Q 001743 914 -----VFRLDGPD-PDLIL-NTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFAN 986 (1018)
Q Consensus 914 -----~~~~~~~~-~~~~~-~t~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~q~~~v~~~~~~~~ 986 (1018)
.++.+... ..... .+++|.+++++|+ +.+++|.. +.++|+.. .|++++..++..+++|++.+.+...+|+
T Consensus 735 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (885)
T 3b8c_A 735 DFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSR-SWSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAK 811 (885)
T ss_dssp TTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSC-TTTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCCC-CCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 765223575411022999999999999999999-99976458-88701186-4999999999999999999860221031
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 57889888999999999999999997571
Q 001743 987 TTPLNLQQWFVSILLGFLGMPIAAVLKLI 1015 (1018)
Q Consensus 987 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~i 1015 (1018)
+.|++|.+|+++++++++.+++.++.|++
T Consensus 812 ~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 840 (885)
T 3b8c_A 812 IRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840 (885)
T ss_dssp CCCCTTTTHHHHHHHTGGGTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37760999999999999999999999999
No 6
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=756.22 Aligned_cols=674 Identities=23% Similarity=0.269 Sum_probs=506.6
Q ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 01000144799976323334668675422345643046888765565222357730393233342103784789871698
Q 001743 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (1018)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv 121 (1018)
...|..+.|+.+.+.+++.+++||+.+.++.+.|++. ..+..++.++++..||.+.+.+.....+.++.+.+.+...+
T Consensus 13 Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~--~~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (723)
T 3j09_A 13 CAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK--RIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYV 90 (723)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSS
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6689999999984599953899975787799984788--68999999999843876543211110116889999999999
Q ss_pred HHHH----HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC--CC----CCCCHHHHHHHHHHHHHHHH------HHHHHHH
Q ss_conf 7999----8819994899991099999999722998568--89----98729999999995557999------9999999
Q 001743 122 EGIA----EKLSTSITDGISTSEHLLNRRKEIYGINKFT--ES----PARGFWVYVWEALHDMTLMI------LAVCALV 185 (1018)
Q Consensus 122 ~~l~----~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~--~~----~~~~f~~~~~~~~~~~~~~i------lli~a~i 185 (1018)
..+. ..+.. .|..+. +.+-.+. .+ .+.+|++..|++++.....+ -..+|++
T Consensus 91 ~~~~~~~~~~~~~---~~~~~~----------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~ 157 (723)
T 3j09_A 91 AAFAGVLLLFLAH---FISLPY----------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFL 157 (723)
T ss_dssp TTTTHHHHHHHTT---SSCSSS----------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHCCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999999---740323----------789999999999999689999999999981889829999999999999
Q ss_pred HHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH--HHCCCEEEEEECCEEEEEECCCCCC
Q ss_conf 98752002-69998841258999999999999999999999999996----72--4169848999799599976178433
Q 001743 186 SLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL----DR--EKKKITVQVARNGFRRKISIYDLLP 258 (1018)
Q Consensus 186 s~~~~~~~-~g~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l----~~--~~~~~~v~ViR~G~~~~I~~~~Lvv 258 (1018)
..++.... .+....|||..++++.++++ ++|.+.++.++. .+ ...+..++|+|||++++|+++||+|
T Consensus 158 ~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~ 231 (723)
T 3j09_A 158 ASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAV 231 (723)
T ss_dssp HHHHHHHTTTTCCCCCCTTHHHHHHHHHH------HHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCT
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCC
T ss_conf 99999985146632399999999999999------999999999999999988872699756999899899989899799
Q ss_pred CCEEEECCCCEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 71999569984101279994253168721456999841248999867712489716298999998132024368843137
Q 001743 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (1018)
Q Consensus 259 GDiI~l~~Gd~vPaDgili~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (1018)
||+|.+++||+|||||++++|++ .||||+|||||.|+.|..++ .+++||.+.+|.++++|+++|.+|.++++.+++.+
T Consensus 232 GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~-~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~ 309 (723)
T 3j09_A 232 GDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGD-EVFGATINNTGVLKIRATRVGGETLLAQIVKLVED 309 (723)
T ss_dssp TCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTC-EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSS
T ss_pred CCEEEECCCCEEEEEEEEEECCE-EEECCCCCCCCCCEEECCCC-EECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHH
T ss_conf 98999889998856799997776-88600013887646636898-23041697067299999984674399999999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99999827999999999999998999999999998877653035787545688673789999999987655323662589
Q 001743 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (1018)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~i~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLpl 418 (1018)
+..+++|+|+.+|+++.++.++.+.++++++++|... .+. .+...+..++++++++|||+|++
T Consensus 310 a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~l 372 (723)
T 3j09_A 310 AMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGL 372 (723)
T ss_dssp SCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------TTC----------TTCCSHHHHHHHHHHHSCTTHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCC----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5346983899999999999999999999999999985-------688----------69999999999997502678999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHH
Q ss_conf 99999999999972173232450233202780689707667556686399999983825540699998888999993699
Q 001743 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (1018)
Q Consensus 419 avtl~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (1018)
++|+++..++.++.++|+++|+++++|++|++++||||||||||+|+|+|.+++..+.. .++.+
T Consensus 373 a~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l 436 (723)
T 3j09_A 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELL 436 (723)
T ss_dssp HHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHH
T ss_pred HHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC----------------HHHHH
T ss_conf 99999999999999889389482899876249899984777552696279999807999----------------89999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCE--
Q ss_conf 999999985288407741798324639916899999999809992877420422787088899843899998089937--
Q 001743 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF-- 576 (1018)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~-- 576 (1018)
. .+.+.. ..+.||++.|+++++.+.+..... ..+|.+. ++.+.
T Consensus 437 ~---~aa~~e-------------~~s~hP~~~Ai~~~a~~~~~~~~~---------~~~~~~~----------~g~g~~~ 481 (723)
T 3j09_A 437 R---LAAIAE-------------RRSEHPIAEAIVKKALEHGIELGE---------PEKVEVI----------AGEGVVA 481 (723)
T ss_dssp H---HHHHHH-------------TTCCSHHHHHHHHHHHHTTCCCCS---------CCCCEEE----------TTTEEEE
T ss_pred H---HHHHHH-------------CCCCCCHHHHHHHHHHHCCCCCCC---------CCCEEEE----------CCCCEEE
T ss_conf 9---999985-------------049995428999999854998578---------6445996----------6981699
Q ss_pred EEEECCCHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 99982704899975011125799152089989999999999998713436755321027888889999887505876653
Q 001743 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (1018)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~ 656 (1018)
..+.+|+++.+.+... +.. +.+.+..++++.+|+|++++| .|++++|+++
T Consensus 482 ~~~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va----------------~~~~~~G~i~ 531 (723)
T 3j09_A 482 DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVA----------------RNGRVEGIIA 531 (723)
T ss_dssp TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEE----------------ETTEEEEEEE
T ss_pred EEEEECCHHHHHHCCC----------CCC----HHHHHHHHHHHHCCCEEEEEE----------------ECCEEEEEEE
T ss_conf 9999778999975499----------860----899999999985598289997----------------8999999996
Q ss_pred ECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCC
Q ss_conf 03789887399999998789989999489998999999991986699436508100247999996340233067311831
Q 001743 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (1018)
Q Consensus 657 i~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ia~~~Gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~ 736 (1018)
++|++||+++++|+.|+++|++++|+|||+..++.++|+++|+.. ++++.+|+
T Consensus 532 i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~ 584 (723)
T 3j09_A 532 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPH 584 (723)
T ss_dssp EECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTT
T ss_pred ECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCE---------------------------EECCCCHH
T ss_conf 068752569999999997799799999989899999999859938---------------------------99268999
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38999999987359989996799889454420690054068883888740587613599048999999989999999999
Q 001743 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816 (1018)
Q Consensus 737 ~K~~~v~~l~~~~g~~V~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~ 816 (1018)
+|...++.+|+. +.|+|+|||.||+|||++||+||||| +|++.++++||++++++++.++.+++++||++++||++|
T Consensus 585 ~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~n 661 (723)
T 3j09_A 585 QKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 661 (723)
T ss_dssp CHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999998349--93999989823099995499879967-875999986999996799889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999999875206---9986469999998867767867440568
Q 001743 817 VQFQLTVNVVALIVNFSSACLT---GNAPLTAVQLLWVNMIMDTLGALALATE 866 (1018)
Q Consensus 817 i~f~l~~nv~~i~~~~~~~~~~---~~~pl~~~qll~inli~d~l~alaLa~e 866 (1018)
+.|+++||++.+++++.+.... .-.|..+.-....+-+.-.+-++.|...
T Consensus 662 l~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~ 714 (723)
T 3j09_A 662 IFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNY 714 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCC
T ss_conf 99999999999999997565401551488999999815489999977875267
No 7
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=741.49 Aligned_cols=576 Identities=25% Similarity=0.350 Sum_probs=463.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHC-----C------CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99872999999999555799999999------999875200-----2------699988412589999999999999999
Q 001743 158 SPARGFWVYVWEALHDMTLMILAVCA------LVSLVVGIA-----T------EGWPKGAHDGLGIVMSILLVVFVTATS 220 (1018)
Q Consensus 158 ~~~~~f~~~~~~~~~~~~~~illi~a------~is~~~~~~-----~------~g~~~~~~d~~~i~~~illv~~v~~~~ 220 (1018)
-.+.+|++..|++++.....+....+ ++..++.+. . .+..+.|||++++++.++++ +
T Consensus 128 ~~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~ll------g 201 (736)
T 3rfu_A 128 WGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLL------G 201 (736)
T ss_dssp TTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------H
T ss_conf 9538999999999985589759999999999999999998631004420013567643089999999999999------9
Q ss_pred HHHHHHHHHH-------HHHHHCCCEEEEEE-CCEEEEEECCCCCCCCEEEECCCCEEECCEEEEEECCEEEEECCCCCC
Q ss_conf 9999999999-------67241698489997-995999761784337199956998410127999425316872145699
Q 001743 221 DYKQSLQFKD-------LDREKKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292 (1018)
Q Consensus 221 ~~~~~~~~~~-------l~~~~~~~~v~ViR-~G~~~~I~~~~LvvGDiI~l~~Gd~vPaDgili~g~~l~VDeS~LTGE 292 (1018)
+|.+.++.++ |.+ ..+..++|+| ||++++|++++|+|||+|.+++||+|||||++++|++ .||||+||||
T Consensus 202 ~~le~~a~~~~~~ai~~L~~-l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGE 279 (736)
T 3rfu_A 202 QVLELKAREQTGSAIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGE 279 (736)
T ss_dssp HHHHHHHHCCCSSHHHHHTC-CCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCE-EEEECCCCCC
T ss_conf 99999999999999999883-399889999529989998776689898899879975156379997866-7651235786
Q ss_pred CCCCCCCCCCCEEEECCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98412489998677124897162989999981320243688431379999982799999999999999899999999999
Q 001743 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVM 372 (1018)
Q Consensus 293 s~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~i~~~v~ 372 (1018)
|.|+.|..++. +++||.+.+|.++++|+++|.+|.+++|.+++.+++.+++|+|+.+|+++.++.++.+.+++++|++|
T Consensus 280 S~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w 358 (736)
T 3rfu_A 280 PIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVW 358 (736)
T ss_dssp SSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCC-CCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14278316886-77864861450999999841225999999999974326897999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEE
Q ss_conf 88776530357875456886737899999999876553236625899999999999997217323245023320278068
Q 001743 373 VQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATS 452 (1018)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLplavtl~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~ 452 (1018)
.... .. . .+...+..++++++++|||+|++++|+++..++.++.++|+++|+++++|++|++++
T Consensus 359 ~~~~-------~~-~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 359 ALLG-------PQ-P--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp HHHC-------SS-S--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred HHHC-------CC-C--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCE
T ss_conf 9967-------87-3--------299999998774877324278888999999999997515133233789998627999
Q ss_pred EEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHH
Q ss_conf 97076675566863999999838255406999988889999936999999999852884077417983246399168999
Q 001743 453 ICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532 (1018)
Q Consensus 453 Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~Al 532 (1018)
||||||||||+|+|+|.+++..+.. .++.+.+ +.+.. ..+.||++.|+
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~---aa~le-------------~~s~hPla~Ai 470 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV----------------EDNALAL---AAALE-------------HQSEHPLANAI 470 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHH---HHHHH-------------HSSCCHHHHHH
T ss_pred EEEECCCCCCCCCEEEEEEEECCCC----------------HHHHHHH---HHHHH-------------HCCCCHHHHHH
T ss_conf 9981898875895279999834887----------------7899999---99986-------------22899289999
Q ss_pred HHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCEECCCHHHHHHH
Q ss_conf 99999809992877420422787088899843899998089937999827048999750111257991520899899999
Q 001743 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (1018)
Q Consensus 533 l~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 612 (1018)
++++.+.+... ....+|++.+++. +.....+.. +.+|+++.+.+.+.. . ..+
T Consensus 471 v~~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~----------~-----~~~ 522 (736)
T 3rfu_A 471 VHAAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD----------N-----APL 522 (736)
T ss_dssp HHHHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC----------C-----HHH
T ss_pred HHHHHHCCCCC---------CCCCCCCCCCCCE-EEEEECCEE---EEECCHHHHHHCCCC----------H-----HHH
T ss_conf 99999659986---------6754320248865-899999989---997389999873997----------1-----678
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q ss_conf 99999998713436755321027888889999887505876653037898873999999987899899994899989999
Q 001743 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692 (1018)
Q Consensus 613 ~~~i~~~a~~glr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~i~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ 692 (1018)
.+..++++.+|+|++++|+ |.+++|+++++|++||+++++|+.|+++|++++|+|||+..++.+
T Consensus 523 ~~~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ 586 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA 586 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 9999999856986999987----------------998999998503220309999999998799499987989899999
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEE
Q ss_conf 99991986699436508100247999996340233067311831389999999873599899967998894544206900
Q 001743 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (1018)
Q Consensus 693 ia~~~Gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~~v~~l~~~~g~~V~~~GDG~ND~~al~~Advg 772 (1018)
+|+++||.. ++++++|++|..+++.+|+. |+.|+|+|||.||+|||++||+|
T Consensus 587 ia~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvG 638 (736)
T 3rfu_A 587 VAGTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIG 638 (736)
T ss_dssp HHHHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEE
T ss_pred HHHHCCCCE---------------------------EEEECCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCEE
T ss_conf 999859987---------------------------99706999999999999966-99899998985769999869977
Q ss_pred EEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCC--CCHHHHHHH
Q ss_conf 54068883888740587613599048999999989999999999999999999999999987-520699--864699999
Q 001743 773 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS-ACLTGN--APLTAVQLL 849 (1018)
Q Consensus 773 iamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~-~~~~~~--~pl~~~qll 849 (1018)
|||| +|+|+++++||++++++++.++++++++||++++||++|+.|++.||+++++++... .-+.|. +|+-+.-..
T Consensus 639 IAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m 717 (736)
T 3rfu_A 639 IAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAM 717 (736)
T ss_dssp EEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHH
T ss_pred EEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 9947-865999976999992698789999999999999999999999999999999999987877504313299999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 98867767867440
Q 001743 850 WVNMIMDTLGALAL 863 (1018)
Q Consensus 850 ~inli~d~l~alaL 863 (1018)
..+-+.-.+-++-|
T Consensus 718 ~~Ssv~Vv~nslrl 731 (736)
T 3rfu_A 718 ALSSVSVIINALRL 731 (736)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHH
T ss_conf 74399999998986
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=709.08 Aligned_cols=571 Identities=25% Similarity=0.311 Sum_probs=446.6
Q ss_pred CCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98729999999995557999------999999998752002-69998841258999999999999999999999999996
Q 001743 159 PARGFWVYVWEALHDMTLMI------LAVCALVSLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL 231 (1018)
Q Consensus 159 ~~~~f~~~~~~~~~~~~~~i------lli~a~is~~~~~~~-~g~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l 231 (1018)
.+.+|++..|++++.....+ -..+|++..++.... .+..+.|||+.++++.++++ ++|.+.++.++.
T Consensus 47 ~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~ 120 (645)
T 3j08_A 47 SGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRT 120 (645)
T ss_dssp HHHHHHHHTCCTTTTCSGGGCCCCSCHHHHHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHH------HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_conf 99999999999997489992899999999999999999986335632599999999999999------999999999999
Q ss_pred ----HH--HHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEE
Q ss_conf ----72--416984899979959997617843371999569984101279994253168721456999841248999867
Q 001743 232 ----DR--EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFL 305 (1018)
Q Consensus 232 ----~~--~~~~~~v~ViR~G~~~~I~~~~LvvGDiI~l~~Gd~vPaDgili~g~~l~VDeS~LTGEs~pv~k~~~~~~l 305 (1018)
.+ ...+.+++|+|||++++|+++||+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|..++ .+
T Consensus 121 ~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~Pv~K~~g~-~v 198 (645)
T 3j08_A 121 GEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGD-EV 198 (645)
T ss_dssp CCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTC-EE
T ss_pred HHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEECCE-EEECCCCCCCCCCEECCCCC-EE
T ss_conf 99999986179997999999979998899979899999889998866899998868-99802246998765608999-74
Q ss_pred EECCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 71248971629899999813202436884313799999827999999999999998999999999998877653035787
Q 001743 306 LSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385 (1018)
Q Consensus 306 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~i~~~v~~~~~~~~~~~~~~ 385 (1018)
++||.+.+|.++++|+++|.+|.++++.+++.+++.+++|+|+.+|+++.++.++.+.++++++++|... .+.
T Consensus 199 ~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~ 271 (645)
T 3j08_A 199 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA 271 (645)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-------CSC
T ss_pred ECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCC
T ss_conf 1667982572999999727745999999999973146985899999999999999999999999999995-------698
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 54568867378999999998765532366258999999999999972173232450233202780689707667556686
Q 001743 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNH 465 (1018)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~v~ilvvavP~gLplavtl~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~ 465 (1018)
.+...+..++++++++|||+||+++|+++..++.++.++|+++|+++++|++|++++||||||||||+|+
T Consensus 272 ----------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~ 341 (645)
T 3j08_A 272 ----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGK 341 (645)
T ss_dssp ----------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSC
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCC
T ss_conf ----------6999999999999987366899999999999999999779376681699986279999986866655897
Q ss_pred EEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHHHHHHCCCCHHH
Q ss_conf 39999998382554069999888899999369999999998528840774179832463991689999999980999287
Q 001743 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA 545 (1018)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~ 545 (1018)
|+|.+++..+.. .++.+.+ +.+.. ..+.||++.|+++++.+.+.....
T Consensus 342 ~~v~~~~~~~~~----------------~~~~l~~---aa~~e-------------~~s~hPla~Aiv~~a~~~g~~~~~ 389 (645)
T 3j08_A 342 PEVTDLVPLNGD----------------ERELLRL---AAIAE-------------RRSEHPIAEAIVKKALEHGIELGE 389 (645)
T ss_dssp CEEEEEEESSSC----------------HHHHHHH---HHHHH-------------TTCCSHHHHHHHHHHHHTTCCCCS
T ss_pred EEEEEEEECCCC----------------HHHHHHH---HHHHH-------------HCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 079999817999----------------7999999---99975-------------158874679999999965998678
Q ss_pred HHHHCCEEEEECCCCCCCEEEEEEEECCCCE--EEEECCCHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7420422787088899843899998089937--99982704899975011125799152089989999999999998713
Q 001743 546 ERQASKIVKVEPFNSVKKQMGVVIELPEGGF--RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEA 623 (1018)
Q Consensus 546 ~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~--~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~g 623 (1018)
..+|.+. ++.+. ..+.+|+++.+.+... +.. +.+.+..++++.+|
T Consensus 390 ---------~~~~~~~----------~g~g~~~~~v~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g 436 (645)
T 3j08_A 390 ---------PEKVEVI----------AGEGVVADGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREA 436 (645)
T ss_dssp ---------CCCCEEE----------TTTEEEETTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTT
T ss_pred ---------CCCEEEE----------CCCCEEEEEEEECCHHHHHHCCC----------CCC----HHHHHHHHHHHHCC
T ss_conf ---------6535996----------58846999999887999975498----------751----88999999998559
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 43675532102788888999988750587665303789887399999998789989999489998999999991986699
Q 001743 624 LRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (1018)
Q Consensus 624 lr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~i~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ia~~~Gi~~~~ 703 (1018)
+|++++| .|++++|+++++|++||+++++|+.|+++|++++|+|||+..++.++++++|+..
T Consensus 437 ~~~l~va----------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-- 498 (645)
T 3j08_A 437 KTAVIVA----------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-- 498 (645)
T ss_dssp CCCEEEE----------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--
T ss_pred CEEEEEE----------------ECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCE--
T ss_conf 8389998----------------8999999999348765679999999997799799990888799999999839978--
Q ss_pred CEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCHHH
Q ss_conf 43650810024799999634023306731183138999999987359989996799889454420690054068883888
Q 001743 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 783 (1018)
Q Consensus 704 ~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~~v~~l~~~~g~~V~~~GDG~ND~~al~~Advgiamg~~g~~~a 783 (1018)
++++++|++|...++.+++. +.|+|+|||.||+||++.||+||||| +|++.+
T Consensus 499 -------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a 550 (645)
T 3j08_A 499 -------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA 550 (645)
T ss_dssp -------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCS
T ss_pred -------------------------EEEECCHHHHHHHHHHHHHC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHH
T ss_conf -------------------------99837877689999998609--95999969776899997599889948-875999
Q ss_pred HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C--CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 740587613599048999999989999999999999999999999999987520-6--9986469999998867767867
Q 001743 784 KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL-T--GNAPLTAVQLLWVNMIMDTLGA 860 (1018)
Q Consensus 784 k~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~-~--~~~pl~~~qll~inli~d~l~a 860 (1018)
+++||++++++++.++.+++++||++++||++|+.|+++||++.+++++.+... . .-.|.-+.-....+-+.-.+-+
T Consensus 551 ~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~ns 630 (645)
T 3j08_A 551 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANS 630 (645)
T ss_dssp SCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHT
T ss_pred HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHH
T ss_conf 98699999369988999999999999999999999999999999999998676510353389999998715168988756
Q ss_pred HHCCC
Q ss_conf 44056
Q 001743 861 LALAT 865 (1018)
Q Consensus 861 laLa~ 865 (1018)
+.|..
T Consensus 631 lrl~~ 635 (645)
T 3j08_A 631 LLLRN 635 (645)
T ss_dssp TSCCC
T ss_pred HHHCC
T ss_conf 87616
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=257.29 Aligned_cols=260 Identities=23% Similarity=0.351 Sum_probs=199.2
Q ss_pred HHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999721732324502332027806897076675566863999999838255406999988889999936999999999
Q 001743 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (1018)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (1018)
.++.++.++|+++|+.+++|+|+++++||||||||||+|+|.+.+++ +. ++.+...
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~---- 59 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA---- 59 (263)
Q ss_pred HHCCCCEEEECCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHH
Q ss_conf 85288407741798324639916899999999809992877420422787088899843899998089937999827048
Q 001743 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585 (1018)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~~~~~KGa~e 585 (1018)
+..+ ..+.||...|+..++...+...... ..| ...++.+....+++...
T Consensus 60 -----~~~e-------~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~----------~~~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 60 -----ASVE-------ALSSHPIAKAIVKYAKEQGVKILEV---------KDF----------KEISGIGVRGKISDKII 108 (263)
Q ss_pred HHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCH
Q ss_conf 99975011125799152089989999999999998713436755321027888889999887505876653037898873
Q 001743 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 665 (1018)
Q Consensus 586 ~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~i~D~lR~~~ 665 (1018)
. +... .++.+ +.. ..+..+.|.+.+.|+++|++
T Consensus 109 ~-----------------~G~~-------------~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 109 E-----------------VKKA-------------ENNND-IAV----------------YINGEPIASFNISDVPRPNL 141 (263)
Q ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHH
Q ss_conf 99999998789989999489998999999991986699436508100247999996340233067311831389999999
Q 001743 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (1018)
Q Consensus 666 ~~aI~~l~~aGi~v~m~TGD~~~ta~~ia~~~Gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~~v~~l 745 (1018)
.++++.|++.|+++.|+|||+..++..+++++|+.. +|+...|++|...++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Q ss_pred HHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87359989996799889454420690054068883888740587613599048999999989999999999
Q 001743 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 816 (1018)
Q Consensus 746 ~~~~g~~V~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~k~ 816 (1018)
+.. ++.++|+|||.||+++++.|++|++|| ++++.+++.+|++++++++..+..+++.+|.++.+|++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=211.75 Aligned_cols=278 Identities=29% Similarity=0.402 Sum_probs=211.6
Q ss_pred HHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999721732324502332027806897076675566863999999838255406999988889999936999999999
Q 001743 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (1018)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 505 (1018)
-+.+++.++|+++|++.++|+|+++++||||||||||.+.+.+.+++..+. . .+..+++ +.
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~---~~ 68 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRL---AA 68 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHH---HH
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC--C--------------HHHHHHH---HH
T ss_conf 157899879979968089988536999999689988289779999981799--9--------------9999999---99
Q ss_pred HHCCCCEEEECCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEE--EEECCC
Q ss_conf 852884077417983246399168999999998099928774204227870888998438999980899379--998270
Q 001743 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGA 583 (1018)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vvv~~~~~~~~--~~~KGa 583 (1018)
+.. ..+.||++.|+.+++...|...... +... ...+.+.. .+.+|.
T Consensus 69 ~~e-------------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~---------------~~~G~~~~~~~~~~g~ 116 (287)
T 3a1c_A 69 IAE-------------RRSEHPIAEAIVKKALEHGIELGEP----EKVE---------------VIAGEGVVADGILVGN 116 (287)
T ss_dssp HHT-------------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEE---------------EETTTEEEETTEEEEC
T ss_pred HHH-------------HCCCCHHHHHHHHHHHHCCCCCCCC----CCCE---------------EECCCCEEEEEEEECC
T ss_conf 975-------------2179979999999998659985555----4414---------------6248872889999889
Q ss_pred HHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
Q ss_conf 48999750111257991520899899999999999987134367553210278888899998875058766530378988
Q 001743 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (1018)
Q Consensus 584 ~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~A~k~~~~~~~~~~~~~~~~l~lig~i~i~D~lR~ 663 (1018)
++.+...+ . +.++ .+.+..+.+..+|.+++++++ +..+.+.+...++++|
T Consensus 117 ~~~~~~~~--------~--~~~~----~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 117 KRLMEDFG--------V--AVSN----EVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp HHHHHHTT--------C--CCCH----HHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCT
T ss_pred HHHHHHCC--------C--CCCH----HHHHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEECCCCCH
T ss_conf 99998659--------9--7507----789999998747975999999----------------9989999995453614
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf 73999999987899899994899989999999919866994365081002479999963402330673118313899999
Q 001743 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (1018)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~~ta~~ia~~~Gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~~v~ 743 (1018)
++.++++.|+++|+++.++||++...+..+.+.+|+.. +|....|..|...++
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~ 219 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVK 219 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE---------------------------EEEECCHHHHHHHHH
T ss_conf 18999999997798599990989899999999809813---------------------------110058177999999
Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99873599899967998894544206900540688838887405876135990489999999899999999
Q 001743 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 814 (1018)
Q Consensus 744 ~l~~~~g~~V~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ni~ 814 (1018)
.++.. +.++|+||+.||.+|.+.|+++++++ ++.+..++.+|+++.++++..+..+++.+|.++.+|+
T Consensus 220 ~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 220 KLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98258--83999979777899999789529967-8877889629999947998999999999999998509
Done!