Query 001753
Match_columns 1018
No_of_seqs 318 out of 3181
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 08:31:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001753.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001753hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0959 N-arginine dibasic con 100.0 1E-122 3E-127 1066.4 90.8 945 1-1018 5-966 (974)
2 COG1025 Ptr Secreted/periplasm 100.0 2E-121 4E-126 1034.5 93.8 921 10-1013 10-935 (937)
3 PRK15101 protease3; Provisiona 100.0 6E-112 1E-116 1068.8 107.9 921 11-1014 31-957 (961)
4 PTZ00432 falcilysin; Provision 100.0 1.7E-59 3.7E-64 579.6 66.2 837 98-990 115-1108(1119)
5 TIGR02110 PQQ_syn_pqqF coenzym 100.0 1.1E-57 2.3E-62 527.2 64.3 678 25-890 1-695 (696)
6 COG1026 Predicted Zn-dependent 100.0 2.1E-53 4.4E-58 484.0 54.9 840 98-990 42-963 (978)
7 KOG2019 Metalloendoprotease HM 100.0 1.4E-52 3E-57 448.0 50.1 837 105-989 77-989 (998)
8 COG0612 PqqL Predicted Zn-depe 100.0 1.3E-47 2.8E-52 440.5 34.6 410 18-499 12-431 (438)
9 KOG0960 Mitochondrial processi 100.0 1.3E-45 2.8E-50 372.7 30.3 408 21-499 31-449 (467)
10 KOG0961 Predicted Zn2+-depende 100.0 6.1E-38 1.3E-42 335.4 48.2 846 98-981 41-983 (1022)
11 KOG2067 Mitochondrial processi 100.0 5E-38 1.1E-42 318.3 26.0 398 23-498 24-443 (472)
12 COG0612 PqqL Predicted Zn-depe 100.0 2E-31 4.4E-36 306.3 33.7 404 570-989 18-435 (438)
13 PRK15101 protease3; Provisiona 99.9 2.6E-24 5.7E-29 272.4 29.1 395 23-498 522-927 (961)
14 KOG2583 Ubiquinol cytochrome c 99.9 7.3E-23 1.6E-27 209.5 32.2 371 98-499 43-420 (429)
15 TIGR02110 PQQ_syn_pqqF coenzym 99.9 1.2E-22 2.5E-27 236.3 33.0 330 572-914 3-348 (696)
16 KOG0960 Mitochondrial processi 99.9 7.6E-22 1.6E-26 200.9 28.9 402 571-994 36-458 (467)
17 KOG2067 Mitochondrial processi 99.9 1.1E-20 2.4E-25 192.7 27.8 400 572-994 28-453 (472)
18 PF00675 Peptidase_M16: Insuli 99.9 1.4E-22 3.1E-27 195.8 13.5 137 98-235 12-148 (149)
19 PTZ00432 falcilysin; Provision 99.8 2.1E-17 4.6E-22 206.0 35.8 403 572-985 95-575 (1119)
20 PF05193 Peptidase_M16_C: Pept 99.8 1.8E-18 3.9E-23 174.7 17.5 178 248-433 2-184 (184)
21 PF05193 Peptidase_M16_C: Pept 99.6 3.7E-15 8.1E-20 150.4 17.3 180 726-912 1-184 (184)
22 COG1026 Predicted Zn-dependent 99.4 2.4E-10 5.3E-15 133.0 30.2 389 575-986 28-460 (978)
23 COG1025 Ptr Secreted/periplasm 99.3 3.5E-09 7.6E-14 123.1 31.9 400 570-987 25-443 (937)
24 KOG2583 Ubiquinol cytochrome c 99.2 8.7E-08 1.9E-12 99.8 31.5 379 573-988 27-423 (429)
25 KOG2019 Metalloendoprotease HM 99.1 5.9E-08 1.3E-12 107.0 27.3 388 573-986 58-497 (998)
26 KOG0959 N-arginine dibasic con 99.1 1.2E-07 2.5E-12 112.9 31.2 397 570-984 29-445 (974)
27 PF00675 Peptidase_M16: Insuli 98.7 1.7E-07 3.6E-12 90.5 11.5 133 579-713 1-138 (149)
28 KOG0961 Predicted Zn2+-depende 98.6 2.6E-05 5.6E-10 86.6 26.0 310 646-969 99-445 (1022)
29 PF03410 Peptidase_M44: Protei 97.8 0.00031 6.7E-09 75.3 14.1 180 106-315 26-211 (590)
30 PHA03081 putative metalloprote 97.6 0.00084 1.8E-08 72.1 13.8 180 106-315 26-211 (595)
31 PF08367 M16C_assoc: Peptidase 97.6 0.00012 2.6E-09 76.7 6.4 152 568-728 69-240 (248)
32 PF08367 M16C_assoc: Peptidase 94.7 0.23 4.9E-06 52.2 10.6 92 98-191 91-193 (248)
33 PF09851 SHOCT: Short C-termin 51.3 24 0.00053 23.1 3.2 16 898-913 15-30 (31)
34 PF09186 DUF1949: Domain of un 42.3 71 0.0015 24.0 5.2 50 133-182 4-53 (56)
35 cd08317 Death_ank Death domain 26.3 3.9E+02 0.0084 22.3 9.3 74 879-963 7-83 (84)
36 PRK11512 DNA-binding transcrip 26.2 2.6E+02 0.0055 26.2 7.3 67 356-433 73-139 (144)
37 PF05120 GvpG: Gas vesicle pro 25.6 2E+02 0.0044 23.9 5.3 39 877-917 28-66 (79)
38 PRK03573 transcriptional regul 22.6 3.4E+02 0.0075 25.3 7.5 65 357-433 66-130 (144)
39 PF08288 PIGA: PIGA (GPI ancho 21.8 65 0.0014 27.1 1.9 22 20-43 5-26 (90)
40 cd08805 Death_ank1 Death domai 20.3 5.3E+02 0.011 21.7 8.7 74 881-962 9-82 (84)
41 PF09568 RE_MjaI: MjaI restric 20.3 2.4E+02 0.0053 27.2 5.5 53 899-967 31-83 (170)
No 1
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-122 Score=1066.40 Aligned_cols=945 Identities=42% Similarity=0.704 Sum_probs=873.6
Q ss_pred CCCCCCccccCCccccCCCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccc
Q 001753 1 MGGNGCVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDE 80 (1018)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1018)
|.|+..+..-+..+.|++.|+|.||+++|+|||+|+|++||.+ +
T Consensus 5 ~~~~~~~~~~~~~~~k~~~d~r~yr~~~L~Ngl~alLisDp~t--------------D---------------------- 48 (974)
T KOG0959|consen 5 MSGNIVLKREDVSIVKSLGDTREYRGIELTNGLRALLISDPKT--------------D---------------------- 48 (974)
T ss_pred cccchhhhhcccccccCCCCccceeEEEecCCceEEEecCCCC--------------C----------------------
Confidence 5677788888888999999999999999999999999999988 7
Q ss_pred cchhhhhccccccccccceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCce
Q 001753 81 NDTEKEVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHT 160 (1018)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t 160 (1018)
.+++++.|++||+.||.+.+|||||+|||+|+||++||.++++..+|.++||+.||+|+.++|
T Consensus 49 -----------------~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~e~T 111 (974)
T KOG0959|consen 49 -----------------KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDSEHT 111 (974)
T ss_pred -----------------ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccccccc
Confidence 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeChhhHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccc
Q 001753 161 CYHFEIKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLI 240 (1018)
Q Consensus 161 ~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~ 240 (1018)
+|+|.+..++|+.+|++|+++|.+|+|+++.++||+.+|.+|++++.+++.||.+++.+.++.++|||++|.+||.++|.
T Consensus 112 ~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~ 191 (974)
T KOG0959|consen 112 NYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLL 191 (974)
T ss_pred eEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred h-hhhcCccHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccc---cceEEEEE
Q 001753 241 G-AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLE 316 (1018)
Q Consensus 241 ~-~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~---~~~~~~~~ 316 (1018)
. |.++ -+++.|++||++||++++|++||+|+.+++.++.++.+.|+.+++...+.|.+. .+|+. .++.+.+.
T Consensus 192 ~~p~~~--~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~--~~p~~~e~~~~~~~v~ 267 (974)
T KOG0959|consen 192 EGPREI--DLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFP--EPPFLPEELKKLVRVV 267 (974)
T ss_pred hccccc--hHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCccc--CCCCChHHhCcEEEEE
Confidence 5 3222 569999999999999999999999999999999999999999999888777763 33433 56788889
Q ss_pred ecccccEEEEEEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeCh
Q 001753 317 AVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTD 396 (1018)
Q Consensus 317 ~~~~~~~l~i~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~ 396 (1018)
|.++...+.|.|+.|+....|+..+.+++++++|++++|+|+..|+.+||+.++.++......+++ .|.|.+.+++
T Consensus 268 pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~----~f~v~idLtd 343 (974)
T KOG0959|consen 268 PIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYS----FFNVSIDLTD 343 (974)
T ss_pred eccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccc----eEEEEEEecc
Confidence 999999999999999998889999999999999999999999999999999999998886554444 9999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccccccccccCCCH
Q 001753 397 SGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDE 476 (1018)
Q Consensus 397 ~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~ 476 (1018)
.|.+++++++..++++|+.|+..|..+|.+++...+....|+++.+.++.+++..++.+|+.+|.++++.+..++..+++
T Consensus 344 ~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p 423 (974)
T KOG0959|consen 344 EGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDP 423 (974)
T ss_pred ccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcCceEEEEEeCCCCCCCCccccceecceeeeecCChhHHHhhcCCCCCCCcccCCCCCCCCCCCceeec
Q 001753 477 EMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRA 556 (1018)
Q Consensus 477 ~~i~~~~~~l~~~~~~i~~~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~ 556 (1018)
+.|+.++..|.|.|+++++++..+ +.+++..|+|||+.|.++++|.++++.|....+ .+.+.+|.+|.|||++|++..
T Consensus 424 ~~i~~~~~~L~p~n~~v~~~s~~~-~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~-~~~l~lP~~nefI~t~f~~~~ 501 (974)
T KOG0959|consen 424 DLIQEVLSSLVPSNMRVILVSRSF-EGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHL-NPELHLPTPNEFIPTDFSILP 501 (974)
T ss_pred HHHHHHHHhcCcccceeeeeeecc-ccccccccceeccccccccCCHHHHHHhhccCc-cccccCCCCCccccccccccc
Confidence 999999999999999999999888 577999999999999999999999999966554 678999999999999999887
Q ss_pred cCCCCCCCCCCCCeEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Q 001753 557 NDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAK 636 (1018)
Q Consensus 557 ~~~~~~~~~~~~P~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g 636 (1018)
.+.. ....|.++.+++..++||++|+.|+.||+.+.++|.+|....++.+.+++.++..++.+.+.++.|.|..+|
T Consensus 502 ~~~~----~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aG 577 (974)
T KOG0959|consen 502 APIP----KLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAG 577 (974)
T ss_pred ccCc----cccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 6542 234899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEeCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh-cccChhhHHHHHHHHhhcCCCC
Q 001753 637 LETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKN-TNMKPLSHSSYLRLQVLCQSFY 715 (1018)
Q Consensus 637 ~~~~~~~~~~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~-~~~~p~~~a~~~~~~~l~~~~~ 715 (1018)
++++++.+..|+.++++||+++++.+++.+.+++.+..+++++|+.+|+.+.+++++ ..++|+.+|.+.+..++.+..|
T Consensus 578 l~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W 657 (974)
T KOG0959|consen 578 LTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIW 657 (974)
T ss_pred ceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999999999999999999999999999 5556999999999999999999
Q ss_pred CHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCC-----CCCccccccceeEEcCCC
Q 001753 716 DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ-----PLPIEMRHQECVICLPSG 790 (1018)
Q Consensus 716 ~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 790 (1018)
+..+.++.++.++++++..|...++++..++++|+||++.++|+++++.+.+.++.. |.........+.+.++.|
T Consensus 658 ~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G 737 (974)
T KOG0959|consen 658 SKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNG 737 (974)
T ss_pred chHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceeccCC
Confidence 999999999999999999999999999999999999999999999998888888322 111123445667788999
Q ss_pred CeEEEEeccCCCCCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEE
Q 001753 791 ANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCF 870 (1018)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~ 870 (1018)
..++++.. .++.+.|+++..++|+ +..+..+.+.+.|+.+++..++|+.||||+||||.|+++.....|..++.+
T Consensus 738 ~~~~~~~~-~n~~~~ns~i~~~~Q~----~~~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i 812 (974)
T KOG0959|consen 738 DYYFYRHL-LNKTDDNSCIEVYYQI----GVQDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQI 812 (974)
T ss_pred ceEEEEcc-cccCCCCceEEEEEEc----ccchhHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeecCcceeEE
Confidence 88876654 6788999999999998 788899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHH
Q 001753 871 CIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAED 950 (1018)
Q Consensus 871 ~vqs~~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~ 950 (1018)
.||+. ++++.++.+|+.|++.+.+.+..|++++|+..+.+++.....++.++.....++|.+|..+.|.|+..++.++.
T Consensus 813 ~Vqs~-~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~ 891 (974)
T KOG0959|consen 813 TVQSE-KSVDYLEERIESFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEA 891 (974)
T ss_pred EEccC-CCchHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcch-hhhcc------CCcceecChHHHhhcCcccccCC
Q 001753 951 LKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKE-SEKHS------KSALVIKDLTAFKLSSEFYQSLC 1018 (1018)
Q Consensus 951 i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1018)
++.+|++|+..++..++..++..+++++|.+.|+....+. .++.. ....-|.+++.||+.+++||..+
T Consensus 892 l~~i~k~~~i~~f~~~~~~~a~~~~~lsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~d~~~fk~~~~l~~~~~ 966 (974)
T KOG0959|consen 892 LKKITKEDVINFFDEYIRKGAAKRKKLSVHVHGKQLDEEASSEKIKSQSENLLKIKEITDIVAFKRSLPLYPLVK 966 (974)
T ss_pred HHhhhHHHHHHHHHhhccccchhcceEEEEecCchhhhhhhcccchhhhhhcccccchHHHHHhhcccccccccc
Confidence 9999999999999999999999999999999998753331 11110 11223779999999999999754
No 2
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-121 Score=1034.52 Aligned_cols=921 Identities=31% Similarity=0.519 Sum_probs=842.8
Q ss_pred cCCccccCCCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcc
Q 001753 10 SDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKG 89 (1018)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1018)
....|.|+..|.+.|+.++|+|||+++|++||.. +
T Consensus 10 ~~~~i~~~~~d~r~y~~I~LpNGl~~LlisDP~a--------------~------------------------------- 44 (937)
T COG1025 10 IVLTIHKPALDDRKYRAIKLPNGLRALLVSDPQA--------------D------------------------------- 44 (937)
T ss_pred chhhcccCcccCcceeEEECCCCceEEEecCCCC--------------C-------------------------------
Confidence 3457899999999999999999999999999999 7
Q ss_pred ccccccccceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChh
Q 001753 90 KGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKRE 169 (1018)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~ 169 (1018)
++++++.|++||..||.+.+|+|||+|||+|+||+|||.+++|..+|+++||..||+|..++|+|+|++.++
T Consensus 45 --------ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T~~~~T~fyFeV~~~ 116 (937)
T COG1025 45 --------KSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTAGERTAFYFEVEND 116 (937)
T ss_pred --------ccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCccccccCCCceeEEEEecHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccH
Q 001753 170 FLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINL 249 (1018)
Q Consensus 170 ~l~~~L~~~~~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~ 249 (1018)
+|+.+|++|+++|.+|+|+++.++||+.+|++|+.++..++.+|+++..+.++.++||++||++||.+||.. +.|..+
T Consensus 117 al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN~~TL~~--~p~~~v 194 (937)
T COG1025 117 ALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETLSD--KPGLVV 194 (937)
T ss_pred HHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCChhhhcc--CCCchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999984 124578
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccc---cceEEEEEecccccEEEE
Q 001753 250 QEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVKDVHILDL 326 (1018)
Q Consensus 250 ~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~i 326 (1018)
.++|++||++||+|+||++||+|+.+++++++++.++||.||++....+.. +.|+.. .++++++.|..+...+.|
T Consensus 195 ~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~--p~p~~~d~~t~~ii~i~p~~~~~~L~i 272 (937)
T COG1025 195 QQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPI--PVPVVTDEQTGKIIHIVPAKPRPRLRI 272 (937)
T ss_pred HHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCC--CCCCCChHHhCceEEeccCCCCceEEE
Confidence 999999999999999999999999999999999999999999887766554 223333 678888899999999999
Q ss_pred EEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHH
Q 001753 327 TWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDII 406 (1018)
Q Consensus 327 ~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~ 406 (1018)
.|++++....+...+..+++++||++++|+|...|+++||+.+++++......+ +|.|.|.+.+|++|+++.++|+
T Consensus 273 ~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~~~n----~~~f~is~~LT~~Gl~~~~~VI 348 (937)
T COG1025 273 YFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPISGN----YGVFAISYELTDKGLAHYDRVI 348 (937)
T ss_pred EEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccccCC----cceEEEEeehhhcchhhHHHHH
Confidence 999999888888899999999999999999999999999999999988775433 4599999999999999999999
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccccccccccCCCHHHHHHHHhhc
Q 001753 407 GFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFF 486 (1018)
Q Consensus 407 ~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~~~i~~~~~~l 486 (1018)
..+|++|+.++.+|+..+.+++..++....|++...+.+++++..++.+|..++++.++.....+...++++++.++..+
T Consensus 349 ~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~~~~yd~~~~~~~l~~~ 428 (937)
T COG1025 349 ALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERLALM 428 (937)
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhcccccCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999998
Q ss_pred CcCceEEEEEeCCCCCCCCccccceecceeeeecCChhHHHhhcCCCCCCCcccCCCCCCCCCCCceeeccCCCCCCCCC
Q 001753 487 MPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTV 566 (1018)
Q Consensus 487 ~~~~~~i~~~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~~~~~~ 566 (1018)
.|+|++++.+++. ...++.+.||+++|.+.++..+.++.|+.... ...+.||.+|+|||+++++.......+
T Consensus 429 ~pen~R~~lis~~---~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~~-~~~l~lP~~N~fIp~~~~~~~~~~~~~---- 500 (937)
T COG1025 429 TPENARLWLISKL---EEHDKAAYFYGFPYQVDDYTAQPLDAWQQKAD-SIELSLPEPNPFIPDDVSLIKSEKKFT---- 500 (937)
T ss_pred CccceEEEEecCC---CCccccceeecCcceecchhhhhhhhhhcccc-cccccCCCCCCCCCccccccccccCCC----
Confidence 8999999999986 34588999999999999999999999987765 567889999999999999855444333
Q ss_pred CCCeEeeccCCcEEEEecCCCCCC-CeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcCcEEEEEEeC
Q 001753 567 TSPTCIIDEPLIRFWYKLDNTFKL-PRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFS 645 (1018)
Q Consensus 567 ~~P~~~~~~~g~~v~~~~~~~f~~-P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 645 (1018)
.|.++...+|.++||.+++.|.+ ||+.+++.|++|....++++.++..|++.+..+.+.++.|+|..+|+++++.++.
T Consensus 501 -~p~ll~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~la~dal~~~~y~A~~aG~sfs~~~~~ 579 (937)
T COG1025 501 -FPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANS 579 (937)
T ss_pred -CchhhhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHHHHHHHHhhhhHHHhcceEEEeecCC
Confidence 79999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccC-hhhHHHHHHHHhhcCCCCCHHHHHHHh
Q 001753 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMK-PLSHSSYLRLQVLCQSFYDVDEKLSIL 724 (1018)
Q Consensus 646 ~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~-p~~~a~~~~~~~l~~~~~~~~~~~~~l 724 (1018)
.|+.|+++||++.++.++..+.+.+....+++++|..+|+++.+++++...+ |+.++.+.+..++.++.|+..+.++.|
T Consensus 580 ~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~~~~~s~~e~~~~l 659 (937)
T COG1025 580 NGLDLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPYWSREERRNAL 659 (937)
T ss_pred CceEEEeeccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhhhhCCCCcCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998887 999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEeccCCCCC
Q 001753 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCE 804 (1018)
Q Consensus 725 ~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1018)
+.++++++.+|...++++.+++++|+||++.++|.++.+.....++..+... ...+.+.++.+....+......+..
T Consensus 660 ~~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~~~s~~---~~~~~~~~~~~~~~~~e~~~~~~~~ 736 (937)
T COG1025 660 ESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPAIGSTW---YRNPSVYLLKGGTRIFETVGGESDS 736 (937)
T ss_pred hhccHHHHHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhcccCCcc---cCCCceeccCCCeeEeeeccCCccc
Confidence 9999999999999999999999999999999999999887776666543211 2233344555656555555566666
Q ss_pred cCcEEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHH
Q 001753 805 TNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQE 884 (1018)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~ 884 (1018)
.+++++... ...+++..++..|++++++..||++||||+||||.|+|++....+..++.|+|||+...|+++.+
T Consensus 737 an~~i~~~~------~~~~~~~~a~s~Ll~~l~~~~ff~~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~ 810 (937)
T COG1025 737 ANAAILYPQ------QYDEIKSSALSSLLGQLIHPWFFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLE 810 (937)
T ss_pred ccceeEecc------ccchHHHHHHHHHHHHHHhHHhHHHhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHH
Confidence 677665433 33368889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHHHHHH
Q 001753 885 RIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYK 964 (1018)
Q Consensus 885 ~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~~~~~ 964 (1018)
+|+.|+..+...+.+|++++|+..|+++++++..++.|+..++.++|..+..+.++|+.+++.++.++.+|++++.+|+.
T Consensus 811 r~~~F~~~~~~~l~~ms~e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~~ 890 (937)
T COG1025 811 RINAFLETAEPELREMSEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLLDFFE 890 (937)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHhccCCCCcCcHHHHHHHHHhcCHHHHHHHHH
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCccEEEEEEecCCCCcchhhhccCCcceecChHHHhhcCcc
Q 001753 965 TYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEF 1013 (1018)
Q Consensus 965 k~l~p~~~~~~~l~v~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1013 (1018)
.++.. ..+.+++++|.| +...++.... ++|+.+++..++++..+.
T Consensus 891 ~~l~~--~~g~~l~~~i~g-~~~e~~~~~~-~~~~~~~~~~~~~~~~~~ 935 (937)
T COG1025 891 NALSY--EQGSKLLSHIRG-QNGEAEYAHP-EGWTVLENVSALQQTAPL 935 (937)
T ss_pred Hhhcc--cccceeeeeeec-cccccccccC-Cceeeehhhhhhcccccc
Confidence 99964 378899999999 5666665554 899999999999887653
No 3
>PRK15101 protease3; Provisional
Probab=100.00 E-value=6.4e-112 Score=1068.80 Aligned_cols=921 Identities=26% Similarity=0.421 Sum_probs=801.6
Q ss_pred CCccccCCCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccc
Q 001753 11 DEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGK 90 (1018)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (1018)
...+.||++|.+.|+.++|+|||+|++++++.. +
T Consensus 31 ~~~~~k~~~d~~~~~~~~L~NGL~v~l~~~~~~--------------~-------------------------------- 64 (961)
T PRK15101 31 QETIRKSEKDPRQYQAIRLDNGMTVLLVSDPQA--------------V-------------------------------- 64 (961)
T ss_pred cccCcCCCCCccceEEEEeCCCCEEEEEeCCCC--------------c--------------------------------
Confidence 345899999999999999999999999999988 7
Q ss_pred cccccccceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhh
Q 001753 91 GIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREF 170 (1018)
Q Consensus 91 ~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~ 170 (1018)
.++++++|++||++||++.+|+|||+|||+|+||++||..+++.++++.+||++||+|+.++|+|++++++++
T Consensus 65 -------~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~~~~~~~~ 137 (961)
T PRK15101 65 -------KSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNASTASYRTAFYLEVENDA 137 (961)
T ss_pred -------ceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccceECCCceEEEEEcCHHH
Confidence 9999999999999999999999999999999999999976799999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHH
Q 001753 171 LKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQ 250 (1018)
Q Consensus 171 l~~~L~~~~~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~ 250 (1018)
|+.+|++|++++.+|.|+++++++|+++|.+|++.+.++|.+++.+.+...+|++|||+++.+|+.++|.+.. ...++
T Consensus 138 l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G~~etl~~~~--~~~~~ 215 (961)
T PRK15101 138 LPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGGNLETLSDKP--GSKLQ 215 (961)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCCCHHHhhcCC--chHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998710 00279
Q ss_pred HHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccc---cceEEEEEecccccEEEEE
Q 001753 251 EQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVKDVHILDLT 327 (1018)
Q Consensus 251 ~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~i~ 327 (1018)
++|++||++||+|+||+|+|+|++++++++++++++|++||++..+.+... .++.. .+..+...+..++.++.+.
T Consensus 216 ~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~l~ 293 (961)
T PRK15101 216 DALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEIT--VPVVTDAQKGIIIHYVPAQPRKVLRVE 293 (961)
T ss_pred HHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCC--CCCCCHHHcCeEEEEEECCCCcEEEEE
Confidence 999999999999999999999999999999999999999988754322221 11211 3344555677788899999
Q ss_pred EecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHH
Q 001753 328 WTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIG 407 (1018)
Q Consensus 328 ~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~ 407 (1018)
|+.|.....+...+..+++.+||+++.|+|+..|+++||+|+++++..... ..+.|.|.|++.+++.|.++++++++
T Consensus 294 ~~~p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~~~~---~~~~g~f~i~~~~~~~~~~~~~~v~~ 370 (961)
T PRK15101 294 FRIDNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGADPMV---DRNSGVFAISVSLTDKGLAQRDQVVA 370 (961)
T ss_pred EecCCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeecccccc---CCCceEEEEEEEcChHHHHhHHHHHH
Confidence 999987655566688999999999999999999999999999998765321 11245999999999988779999999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccccccccccCCCHHHHHHHHhhcC
Q 001753 408 FVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFM 487 (1018)
Q Consensus 408 ~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~~~i~~~~~~l~ 487 (1018)
.|+++|+.+++.|+++++++++|+....+|.+.....+.+.+..++..+..+++++++.+...++.+++++|+++++.|.
T Consensus 371 ~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~l~ 450 (961)
T PRK15101 371 AIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEHTLDAPYIADRYDPKAIKARLAEMT 450 (961)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCHHHheeCchhhhcCCHHHHHHHHhhcC
Confidence 99999999999999999999999999999988777777888999999998889999999999999999999999999999
Q ss_pred cCceEEEEEeCCCCCCCCccccceecceeeeecCChhHHHhhcCCCCCCCcccCCCCCCCCCCCceeeccCCCCCCCCCC
Q 001753 488 PENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVT 567 (1018)
Q Consensus 488 ~~~~~i~~~~p~~~~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~~~~~~~ 567 (1018)
++|+.+++++|++ .+++.++||+++|++.+|+.++++.|....+ .+.+.||++|+|||++|++....... .
T Consensus 451 ~~n~~i~~~~~~~---~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~-~~~l~lP~~n~fip~~~~~~~~~~~~-----~ 521 (961)
T PRK15101 451 PQNARIWYISPQE---PHNKTAYFVDAPYQVDKISEQTFADWQQKAQ-NIALSLPELNPYIPDDFSLIKADKAY-----K 521 (961)
T ss_pred HhHEEEEEEeCCC---CCCccccccCCcceeecCCHHHHHHHhcCCC-CccCCCCCCCCccCCCCeeccCCCCC-----C
Confidence 9999999999975 4578899999999999999999999987654 66799999999999999987654332 2
Q ss_pred CCeEeeccCCcEEEEecCCCC-CCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcCcEEEEEEeCc
Q 001753 568 SPTCIIDEPLIRFWYKLDNTF-KLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSD 646 (1018)
Q Consensus 568 ~P~~~~~~~g~~v~~~~~~~f-~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~ 646 (1018)
.|.++.+++|++|||++++.| .+|++.+.+.|.+|....++.+.+++.|++.++.+.++++.|.+..+|++++++ +.+
T Consensus 522 ~p~~i~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~~l~e~~y~a~~aG~~~~~~-~~~ 600 (961)
T PRK15101 522 HPELIVDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAGLALDQLSNQASVGGISFSTN-ANN 600 (961)
T ss_pred CCeEEEcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHHHHHHHHhchHHhcCcEEEEc-cCC
Confidence 799999999999999999999 599999999999999989999999999999999999999999999999999999 789
Q ss_pred eeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccC-hhhHHHHHHHHhhcCCCCCHHHHHHHhc
Q 001753 647 KLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMK-PLSHSSYLRLQVLCQSFYDVDEKLSILH 725 (1018)
Q Consensus 647 g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~-p~~~a~~~~~~~l~~~~~~~~~~~~~l~ 725 (1018)
|+.++++|++++++.+++++++.+.+|.|++++|+++|+++++++++..++ |+..+...+..+.....+...++.+.|+
T Consensus 601 g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~~~~~~~py~~~~~~~~~l~ 680 (961)
T PRK15101 601 GLMVNANGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAEKGKAYEQAIMPAQMLSQVPYFERDERRKLLP 680 (961)
T ss_pred CEEEEEEecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999988765 7777766554444444555688999999
Q ss_pred cCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEeccCCCCCc
Q 001753 726 GLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCET 805 (1018)
Q Consensus 726 ~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1018)
++|++|+++|++++|.+.+++++|+||++.+++..+++.+++.++..+.. ....+...++++....+.. .. ....
T Consensus 681 ~it~edl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~-~~-~~~~ 755 (961)
T PRK15101 681 SITLKDVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTE---WWRGKDVVVDKKQSVNFEK-AG-SSTD 755 (961)
T ss_pred cCCHHHHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcc---cccccceEeCCCCeEEEec-CC-CCCC
Confidence 99999999999999999999999999999999999999998888653221 0011112233333322221 11 2233
Q ss_pred CcEEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHH
Q 001753 806 NSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQER 885 (1018)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~~ 885 (1018)
++++..+++. +..+.+..+++.||+++++||||++|||++||||+|+|+.....+.+++.++|||...+++++..+
T Consensus 756 ~~~~~~~~~~----g~~~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~~ 831 (961)
T PRK15101 756 SALAAVYVPT----GYDEYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQR 831 (961)
T ss_pred CeEEEEEEeC----CCCCHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHHH
Confidence 5566666666 556788999999999999999999999999999999999999989999999999998899999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHHHHHHH
Q 001753 886 IDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKT 965 (1018)
Q Consensus 886 i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~~~~~k 965 (1018)
|++|+.++...+++||++||+++|+++++++...++++.+++.++|.++..++++|++.+++++.|++||++||++++++
T Consensus 832 i~~f~~~~~~~l~~lt~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~ 911 (961)
T PRK15101 832 YQAFFPQAEAKLRAMKPEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQ 911 (961)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999997666678999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred h-cccCCCCccEEEEEEecCCCCcchhhhccCCcceecChHHHhhcCccc
Q 001753 966 Y-LQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFY 1014 (1018)
Q Consensus 966 ~-l~p~~~~~~~l~v~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1014 (1018)
| +.+. +..++++|.|.......... +.++..++++..||+..++.
T Consensus 912 ~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 957 (961)
T PRK15101 912 AVIEPQ---GLAILSQISGSQNGKADYAH-PKGWKTWENVSALQQTLPVM 957 (961)
T ss_pred HhcCCC---CCEEEEEeeccCcccccccc-ccCCeeeCCHHHHhhcCccc
Confidence 8 6543 44888888888552111111 13467799999999988764
No 4
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=1.7e-59 Score=579.60 Aligned_cols=837 Identities=13% Similarity=0.067 Sum_probs=559.6
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcC--CcceeeeCCCceEEEEEeChh-hHHHH
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHG--GSSNAYTETEHTCYHFEIKRE-FLKGA 174 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g--~~~na~t~~~~t~~~~~~~~~-~l~~~ 174 (1018)
..+++++|++|+ .+..|+||++|||+|+||++||.. ++...+.+.| +.+||+|+.|+|+|++++.++ +|..+
T Consensus 115 ~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~-~~~~~l~~~gl~~~lNA~T~~D~T~Y~~~~~~e~d~~~~ 189 (1119)
T PTZ00432 115 EMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYK-DSFSLLVQGGFNSFLNAYTFKDRTSYLFASTNEKDFYNT 189 (1119)
T ss_pred eeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcc-cHHHHHHhcCcCCCccccCCCCceEEEeccCCHHHHHHH
Confidence 688999999996 467899999999999999999985 5666666644 889999999999999998775 79999
Q ss_pred HHHHHhhccCCCCChhHH--H---------HH--------------------HHHHHHHHHhhcCChHHHHHHHHHhhCC
Q 001753 175 LMRFSQFFISPLMKVEAM--E---------RE--------------------VLAVDSEFNQALQNDACRLQQLQCHTSQ 223 (1018)
Q Consensus 175 L~~~~~~~~~p~~~~~~~--~---------~e--------------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~ 223 (1018)
|+++++++++|.|+++.+ . ++ +++|.+|++...++|.+++++.+.+.+|
T Consensus 190 ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~~~~~lf 269 (1119)
T PTZ00432 190 ADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKKRFSDPLSFGYSVIYQNLF 269 (1119)
T ss_pred HHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 999999999999998863 2 22 7899999999999999999999999999
Q ss_pred CCCCCCccccCchhccchhhhcCccHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCC----CC
Q 001753 224 LGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK----PQ 299 (1018)
Q Consensus 224 ~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~----~~ 299 (1018)
+|||+++++|++++|.+ ++.++|++||++||+|+||+|+++||+|++++.++++++|+.+|+..... +.
T Consensus 270 -~~pY~~~~~G~~~~I~~------lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~~~~~~~~~~~~~ 342 (1119)
T PTZ00432 270 -SNVYKYDSGGDPKDIVE------LTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHPKTGQLSHTAYRE 342 (1119)
T ss_pred -CCCCCCCCCCChHhhcc------CCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhcccccccccccccc
Confidence 99999999999999999 99999999999999999999999999999999999999999887653211 00
Q ss_pred -ccc--c-ccccccceEEEE---EecccccEEEEE-EecCCc-----------hhhhhcCcHHHHHHHhcCCCCCcHHHH
Q 001753 300 -FTV--E-GTIWKACKLFRL---EAVKDVHILDLT-WTLPCL-----------HQEYLKKSEDYLAHLLGHEGRGSLHSF 360 (1018)
Q Consensus 300 -~~~--~-~~~~~~~~~~~~---~~~~~~~~l~i~-~~~p~~-----------~~~~~~~~~~~l~~iLg~~~~~~L~~~ 360 (1018)
... + .+.+...+.+.. .....+..+.++ |.+++. .+..+..++.+|+++||+++.|+|++.
T Consensus 343 ~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q~ 422 (1119)
T PTZ00432 343 DADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYKA 422 (1119)
T ss_pred cccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcCCCccHHHHH
Confidence 000 0 011122222221 112234556665 988432 223467899999999999999999999
Q ss_pred HHhcCccceecccccCccCCccccceEEEEEEEeCh-hh----hhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhhcc
Q 001753 361 LKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTD-SG----LEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNM 435 (1018)
Q Consensus 361 Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~-~g----~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~ 435 (1018)
||+.||+|++..+...... ..+.|.|.+...+ .. .++++++.+.|+++|+.++++|+++++++++++.+..
T Consensus 423 LrE~GLa~svv~~~~~~~~----~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef 498 (1119)
T PTZ00432 423 LIDSGLGKKVVGSGLDDYF----KQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEF 498 (1119)
T ss_pred HHhcCCCcCCCcCcccCCC----CceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 9999999996432222222 2348888875332 11 1347899999999999999999999999999887766
Q ss_pred ccccccCC---CcHHHHHHHHHhcCC-CCccccccccccccC------CCHHHHHHHHhh-cCcCce-EEEEEeCCC--C
Q 001753 436 EFRFAEEQ---PQDDYAAELAGNLLI-YPAEHVIYGEYMYEV------WDEEMIKHLLGF-FMPENM-RIDVVSKSF--A 501 (1018)
Q Consensus 436 ~~~~~~~~---~~~~~~~~l~~~~~~-~~~~~~l~~~~~i~~------~t~~~i~~~~~~-l~~~~~-~i~~~~p~~--~ 501 (1018)
.++-.... ....++..++..+++ .+|.+.+.....++. .++..+++++++ |..++. .++++.|+. .
T Consensus 499 ~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~N~h~~~v~~~p~~s~~ 578 (1119)
T PTZ00432 499 VMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLNNNHRVTVHLEAVESSK 578 (1119)
T ss_pred HhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccCCCeeeEEEEecCCccc
Confidence 65422110 135677777777654 566666655444432 234678999998 544443 445555542 1
Q ss_pred -CCCCccccceecceeeeecCChh----------HHHhhcCCCCCCCc-ccCCCCCCCCCCCceeeccCCCCCCCCCCCC
Q 001753 502 -KSQDFHYEPWFGSRYTEEDISPS----------LMELWRNPPEIDVS-LQLPSQNEFIPTDFSIRANDISNDLVTVTSP 569 (1018)
Q Consensus 502 -~~~~~~~e~~~~~~y~~~~i~~~----------~l~~~~~~~~~~~~-~~lP~~n~~ip~~~~l~~~~~~~~~~~~~~P 569 (1018)
..+....++- .++-....++++ .+++|+..++ +++ +. .+|. +++.+...... .+|
T Consensus 579 ~~~~~~~~e~~-~L~~~~~~Ls~ee~~~i~~~~~~l~~~q~~~~-~~e~l~------~lP~-l~~~DI~~~~~----~~~ 645 (1119)
T PTZ00432 579 YEKEFNKLVKD-ELKERLSHLTKEQVDEMEKAYEKFKKEREADD-DPEHLD------SFPI-LSLSDLNKETE----EIP 645 (1119)
T ss_pred HHHHHHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCC-ChhHHh------hcCC-CcHHHcCCccc----CCc
Confidence 0000111110 111112233322 2334444322 111 11 1221 22222211110 012
Q ss_pred eEe---------------eccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH-H-----
Q 001753 570 TCI---------------IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE-I----- 628 (1018)
Q Consensus 570 ~~~---------------~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~----- 628 (1018)
... ...+++.+++.+..+ ++.+++++.++....+.+...+..||+.+|.....+ +
T Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T----nGi~y~~~~fdl~~l~~e~~~yl~L~~~~l~~~gT~~~s~~el 721 (1119)
T PTZ00432 646 TKLYKLSSDSLKENMDLDSDGGSVTVLVHPIES----RGILYLDFAFSLDSLTVDELKYLNLFKALLKENGTDKLSSEEF 721 (1119)
T ss_pred chhhhcccccccccccccccCCCcceEEEecCC----CCeEEEEEEecCCCCCHHHHhhHHHHHHHHHhcCCCCCCHHHH
Confidence 111 234678887765443 568888888888777888888999999998774321 1
Q ss_pred --hHHhhhcCcEEEEEEeC--------------ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHH
Q 001753 629 --IYQASVAKLETSVSIFS--------------DKLELKVYGFNDKLPVLLSKILAIAKSFLPSD-DRFKVIKEDVVRTL 691 (1018)
Q Consensus 629 --~~~~~~~g~~~~~~~~~--------------~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~-~~f~~~k~~~~~~~ 691 (1018)
.....++|+++++.... ..+.|++.++.++++.+++++.+++.++.|+. +++..+.++.+..+
T Consensus 722 ~~~i~~~tGg~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~ 801 (1119)
T PTZ00432 722 TYKREKNLGGLSASTAFYSETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGM 801 (1119)
T ss_pred HHHHHHhCCCeEEEEEEeccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHH
Confidence 23345688887766533 25889999999999999999999999999975 44777777888888
Q ss_pred HhcccC-hhhHHHHHHHHhhcCC-----CCC---HHHHHHHhc-c-C--C----HHHHHHHHHHHHhhhceEEEEecCCC
Q 001753 692 KNTNMK-PLSHSSYLRLQVLCQS-----FYD---VDEKLSILH-G-L--S----LADLMAFIPELRSQLYIEGLCHGNLS 754 (1018)
Q Consensus 692 ~~~~~~-p~~~a~~~~~~~l~~~-----~~~---~~~~~~~l~-~-i--t----~edl~~~~~~~~~~~~~~~~v~Gni~ 754 (1018)
.+...+ ++..|..++...+... .+. ....+..+. . . . .+.|...+++++...++.+.|+|+.+
T Consensus 802 ~~~~~~~Gh~~A~~~~~s~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~ 881 (1119)
T PTZ00432 802 KTVFSSKGHKFALKRMKSKFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSE 881 (1119)
T ss_pred HHhhhhhHHHHHHHHHHhcCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHH
Confidence 877774 7777776655443321 111 122222221 1 0 1 34466777788889999999999975
Q ss_pred H-HHHHHHHHHHHhhhcCC----CCCccccccc-eeEE---cC-CCCeEEEEeccCCCCCcCcEEEEEEEeccccCcccH
Q 001753 755 Q-EEAIHISNIFKSIFSVQ----PLPIEMRHQE-CVIC---LP-SGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELT 824 (1018)
Q Consensus 755 ~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~-~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1018)
. +.+.+.+..+.+.+... ..+....+.. ..+. .+ ...+.. ..-|..+|.+...+. . -....
T Consensus 882 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~p~~V~yv~~~~~-~----~~~~~ 952 (1119)
T PTZ00432 882 LLDSLLDDSTTFLKKLSSTFKENDNKSSDKVWVKEVLDKKLMESVDKNEF----IVLPTRVNFVGMGGK-L----FDKSD 952 (1119)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccccccccccccccccCCcccceE----EEccCceeEEEEecc-c----ccCCC
Confidence 4 34445555566555321 1000000000 0000 01 011111 112344444443211 0 11233
Q ss_pred HHHHHHHHHHHHhc-hhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHHHc---CC
Q 001753 825 RLKALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLE---GL 900 (1018)
Q Consensus 825 ~~~~~~~ll~~~l~-s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~~i~~~l~~~~~~~~---~i 900 (1018)
+....+.++..+|+ +.||++||++ |++|++++.+.. .|. +.|+ |. ++| ++.+.++.|.+....+.. .+
T Consensus 953 ~~~~~l~Vl~~~L~~~yLw~~IR~~-GGAYG~~~~~~~-~G~--~~f~--SY-RDP-n~~~Tl~~f~~~~~~l~~~~~~~ 1024 (1119)
T PTZ00432 953 KVDGSFQVIVHYLKNSYLWKTVRMS-LGAYGVFADLLY-TGH--VIFM--SY-ADP-NFEKTLEVYKEVASALREAAETL 1024 (1119)
T ss_pred ccCHHHHHHHHHHccccchHHHccc-CCccccCCccCC-CCe--EEEE--Ee-cCC-CHHHHHHHHHHHHHHHHhcCCCC
Confidence 44677778888875 7999999986 789999877754 343 3333 33 555 466777777766655433 49
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEE
Q 001753 901 DDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVR 980 (1018)
Q Consensus 901 s~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~~~~~k~l~p~~~~~~~l~v~ 980 (1018)
|++++++++-+.++.+.. +.++...+...+..++.+. ..+.+++++++|-++|++||+++|++|... ...-.+|
T Consensus 1025 ~~~~l~~~iig~~~~~D~-p~~p~~~g~~~~~~~l~g~-t~e~rq~~R~~il~~t~edi~~~a~~~~~~----~~~~~~~ 1098 (1119)
T PTZ00432 1025 TDKDLLRYKIGKISNIDK-PLHVDELSKLALLRIIRNE-SDEDRQKFRKDILETTKEDFYRLADLMEKS----KEWEKVI 1098 (1119)
T ss_pred CHHHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHcCC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----hccCeEE
Confidence 999999999999999975 6788888877766665553 678899999999999999999999999953 2356788
Q ss_pred EecCCCCcch
Q 001753 981 VWGCNTNIKE 990 (1018)
Q Consensus 981 v~G~~~~~~~ 990 (1018)
|+|.+..+.+
T Consensus 1099 v~g~~~~~~~ 1108 (1119)
T PTZ00432 1099 AVVNSKTSDT 1108 (1119)
T ss_pred EEECHHHhhh
Confidence 8888665443
No 5
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=1.1e-57 Score=527.21 Aligned_cols=678 Identities=20% Similarity=0.228 Sum_probs=459.5
Q ss_pred cEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccccccccccceEEEEE
Q 001753 25 RVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAMC 104 (1018)
Q Consensus 25 ~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 104 (1018)
+.++|+|||+|++++++.. + .+++.++
T Consensus 1 r~~tL~NGLrVllv~~p~~--------------p---------------------------------------~vav~l~ 27 (696)
T TIGR02110 1 RRITLPNGLRVHLYHQPDA--------------K---------------------------------------RAAALLR 27 (696)
T ss_pred CeEEcCCCCEEEEEECCCC--------------C---------------------------------------EEEEEEE
Confidence 4579999999999999988 7 9999999
Q ss_pred eCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhccC
Q 001753 105 VGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFIS 184 (1018)
Q Consensus 105 ~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~~~~~~~~ 184 (1018)
|++||.+||.+.+|+|||+|||+|+||++|+..++|.+.++.+||.+||+|+.|+|+|++++++++++.+|+++++++.+
T Consensus 28 v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~d~T~y~~~v~~~~l~~aL~lLaD~l~~ 107 (696)
T TIGR02110 28 VAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLERTTAFFFELPAAALAAGLARLCDMLAR 107 (696)
T ss_pred EeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcCCeEEEEEEecHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999997557999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHHHHhcCCCC
Q 001753 185 PLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGG 264 (1018)
Q Consensus 185 p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~ 264 (1018)
|.|++++|++||++|.+|++...++|..++.+.+...+|++|||+++.+|+.++|.+... ++.++|++||++||+|+
T Consensus 108 P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL~~it~---~t~edL~~F~~~~Y~p~ 184 (696)
T TIGR02110 108 PLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSLALPNT---AFQQALRDFHRRHYQAG 184 (696)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHhCccc---chHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999999999999999999999999999986100 45999999999999999
Q ss_pred CcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEEEEecccccEEEEEEecCCchhhhhcCcHHH
Q 001753 265 LMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSEDY 344 (1018)
Q Consensus 265 n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~p~~~~~~~~~~~~~ 344 (1018)
||+|+|+||+++++++++++++|+.|+++..+.+.. +.+....++..... ....++.+.|..|..... +..++.+
T Consensus 185 NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~--~~p~~~~~~~~~~~--~~~~q~~l~~~~p~~~~~-d~~al~l 259 (696)
T TIGR02110 185 NMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAP--PAPLLRFDRLTLAG--GSEPRLWLLFALAGLPAT-ARDNVTL 259 (696)
T ss_pred cEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCC--CCCCCCCceeEEEe--cCcceEEEEEeecCCCCC-ChHHHHH
Confidence 999999999999999999999999998765432221 11222223222222 234667777777764322 2236899
Q ss_pred HHHHhcCCCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHHHHHHHHHhc--CCc
Q 001753 345 LAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQV--SPQ 422 (1018)
Q Consensus 345 l~~iLg~~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l~~~--~i~ 422 (1018)
++++||++++|+|+..||++||+|+++++......+ .+.|.|++.+++.+.++.+++++.|+++|++++++ +++
T Consensus 260 L~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~~~g----~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~ 335 (696)
T TIGR02110 260 LCEFLQDEAPGGLLAQLRERGLAESVAATWLYQDAG----QALLALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQ 335 (696)
T ss_pred HHHHhCCCcchHHHHHHHHCCCEEEEEEeccccCCC----CcEEEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999865432222 34899999987655568999999999999999988 888
Q ss_pred hHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccccccccccCCCHHHHHHHHhhcCcCceEEEEEeCCCCC
Q 001753 423 KWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAK 502 (1018)
Q Consensus 423 ~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~~~i~~~~~~l~~~~~~i~~~~p~~~~ 502 (1018)
.++++++|+. .|.+... ++.+.+..-+ ...++.. . ..-...++...+..+.....
T Consensus 336 ~eel~rlk~~---~~~~~~~-~~l~~~r~~~---~~~~~~~--~-----~~~~~~~~~~~l~~~~~~~~----------- 390 (696)
T TIGR02110 336 LEHYAQLAQR---RFQTLAL-SPLAQLRGRA---LGFALGC--A-----LPDALTDFLAALQDCPRTRL----------- 390 (696)
T ss_pred HHHHHHHHHh---hhhhccc-ChHHHHhhhc---cCCCCcc--c-----CcchHHHHHHHHhhcccccc-----------
Confidence 9999999875 3332222 3333333211 1111110 0 00012222333322211100
Q ss_pred CCCccccceecceeeeecCChhHHHhhcCCCCCCCcccCCCCCCCCCCCceeecc-------CCCCCC--C---CCCCCe
Q 001753 503 SQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAN-------DISNDL--V---TVTSPT 570 (1018)
Q Consensus 503 ~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~-------~~~~~~--~---~~~~P~ 570 (1018)
.+.+|+.|||.-.-+..... ...... . -...|.
T Consensus 391 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (696)
T TIGR02110 391 -----------------------------------LTQQQPGAPFAHSGLHAPVARLARAVVQARSVSLTLAASRCSAPK 435 (696)
T ss_pred -----------------------------------cccCCCCcchhhhhccccccccccccccccccccccccccccccc
Confidence 11222233322000000000 000000 0 000000
Q ss_pred EeeccCCcE-EEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcCcEEEEEEeCceeE
Q 001753 571 CIIDEPLIR-FWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLE 649 (1018)
Q Consensus 571 ~~~~~~g~~-v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 649 (1018)
...-.. .+..++.. .-+.++++...|...... +...+...+....-++..+|.+.+++...+.+.
T Consensus 436 ---~~~~~~~~~~~~~~~---~~~~l~l~w~~~~~~~~~--------~~~~l~~~l~~l~~~~~~~g~~~~~~~~~~~w~ 501 (696)
T TIGR02110 436 ---SPTRCAFLAALPSDK---TERALALRWGFPSHPPEE--------LALALQRQLRPLLADARHAGVNGSWQATGASWQ 501 (696)
T ss_pred ---ccccchhhhccCCCC---cccceeeeccCCCCcchH--------HHHHHHHHHHHHHHHHHhcCceeEEEEcCCeEE
Confidence 000000 12222221 235667777666532211 445566677777777888999999999999999
Q ss_pred EEEeecCCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCCCCCHHHHHHHhccC
Q 001753 650 LKVYGFNDKLPVLLSKILAIAKSFLPS--DDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGL 727 (1018)
Q Consensus 650 l~~~g~s~~l~~~l~~l~~~l~~p~~~--~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~~~~~~~~~~~~l~~i 727 (1018)
+.+.|..+-++.++..+...|..|... ... . + ...|..++.+.+.+.+-... .....+.
T Consensus 502 l~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~---~---------~-~~~~~~i~ir~ll~~lp~~~------~~~~~~~ 562 (696)
T TIGR02110 502 LLLNGPRSPMRAVFSVALALLALAAPMLAQPA---A---------N-RASAPSIPIRQLLAALPERL------LKSLPAQ 562 (696)
T ss_pred EEcCCCchhHHHHHHHHHHHHhCCCccccccc---c---------c-CCCCccchHHHHHHhchHhh------ccCcccc
Confidence 999999999999999999999987431 110 0 0 01122333333332221110 0000000
Q ss_pred CHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEeccCCCCCcCc
Q 001753 728 SLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNS 807 (1018)
Q Consensus 728 t~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1018)
.+. +.. .....+ . ..+ +......++..+.. ..+.+... ..+ ... .....++..++
T Consensus 563 --~~~--~~~-----~~~~~~-----~-~~~---~~~~l~~~~~~~~~--~~~~~~~~--~~~-~~~--~~~~~~~~e~a 617 (696)
T TIGR02110 563 --QDD--WLA-----ARWGAA-----T-QLA---QRVALQLSPGTADL--ARPTPLPA--RLG-RGW--VPLACDGGEQA 617 (696)
T ss_pred --ccc--hhh-----hhcccc-----h-hHH---HHHHHHhCCCCCcc--CCCCCCCc--ccc-cce--EeccCCCCCcE
Confidence 000 100 111111 1 222 22223323211100 11111000 012 111 22344455555
Q ss_pred EEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHH
Q 001753 808 VIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERID 887 (1018)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~~i~ 887 (1018)
.+++ +.. +..+..+.++..||.+++..+||+.||.++||||+|+|++....|..|+.|.|||+..++..+...|+
T Consensus 618 lllf-~p~----~~~~~~~~aa~rlla~l~~~~f~qrlRve~qlGY~v~~~~~~~~~~~gllf~~QSP~~~~~~l~~h~~ 692 (696)
T TIGR02110 618 LLLF-CPL----PTADVASEAAWRLLAQLLEPPFFQRLRVELQLGYVVFCRYRRVADRDGLLFALQSPDASARELLQHIK 692 (696)
T ss_pred EEEE-ecC----CCCCHHHHHHHHHHHHHhchhHHHHHHHhhccceEEEEeeEEcCCcceeEEEEeCCCCCHHHHHHHHH
Confidence 5554 447 77889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 001753 888 NFI 890 (1018)
Q Consensus 888 ~~l 890 (1018)
.|+
T Consensus 693 ~fl 695 (696)
T TIGR02110 693 RFL 695 (696)
T ss_pred HHh
Confidence 987
No 6
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=2.1e-53 Score=484.04 Aligned_cols=840 Identities=15% Similarity=0.119 Sum_probs=560.1
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHh-cCCcceeeeCCCceEEEEEe-ChhhHHHHH
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK-HGGSSNAYTETEHTCYHFEI-KREFLKGAL 175 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~-~g~~~na~t~~~~t~~~~~~-~~~~l~~~L 175 (1018)
...++++|+. .|.+..|+||.|||++||||++||-++.|..++.+ ++..+||+|..|+|+|.++. ..+++-++|
T Consensus 42 ~~vFsi~F~T----~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T~YP~sS~~~~Df~NLl 117 (978)
T COG1026 42 NNVFSIAFKT----EPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKTVYPASSANEKDFYNLL 117 (978)
T ss_pred CceEEEEeec----CCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcceeeccccCcchHHHHH
Confidence 6667777664 88899999999999999999999999999999976 57779999999999999985 467999999
Q ss_pred HHHHhhccCCCCChhHHHHH--------------HHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccch
Q 001753 176 MRFSQFFISPLMKVEAMERE--------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG 241 (1018)
Q Consensus 176 ~~~~~~~~~p~~~~~~~~~e--------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~ 241 (1018)
.+++|.+++|.+.++.|.+| +++|.+||+....++..+++..++..+||+..|+..+.|.+..|.+
T Consensus 118 ~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp~~ty~~~SGG~P~~I~~ 197 (978)
T COG1026 118 SVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFPGTTYGVNSGGDPKNIPD 197 (978)
T ss_pred HHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHHhhCCCccccccCCCCcccccc
Confidence 99999999999999999998 6799999999999999999999999999999999999999999999
Q ss_pred hhhcCccHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHh-cccccCCCCCCCCccccccccc-cceEEEE----
Q 001753 242 AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVEL-FANVRKGPQIKPQFTVEGTIWK-ACKLFRL---- 315 (1018)
Q Consensus 242 ~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~-f~~ip~~~~~~~~~~~~~~~~~-~~~~~~~---- 315 (1018)
++.+++++||+++|+|+|++++++||++++++.+.+++. |...+...... +.. ....+. ..+....
T Consensus 198 ------LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~-~i~-~~~~~~~~~~~~~~ypi~ 269 (978)
T COG1026 198 ------LTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDV-PIP-DQKAFKKPRRKVLEYPIS 269 (978)
T ss_pred ------cCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCC-CCC-cccccCcccccceeeccC
Confidence 999999999999999999999999999999999999886 66555443211 111 112222 1111111
Q ss_pred --EecccccEEEEEEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHHhcCcc-ceecccccCccCCccccceEEEEEE
Q 001753 316 --EAVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWA-TSISAGVGDEGMHRSSIAYIFVMSI 392 (1018)
Q Consensus 316 --~~~~~~~~l~i~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr~~gla-~~v~~~~~~~~~~~~~~~~~~~i~~ 392 (1018)
.....+..+.+.|-.++..+.++..++.+|..+|-+...+.|.+.|.+.|+. ..++..+... . ....|.+.+
T Consensus 270 ~~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~~~liesglg~~~~~g~~~~~---~--~~~~f~v~~ 344 (978)
T COG1026 270 FDEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLTQALIESGLGFADVSGSYDSD---L--KETIFSVGL 344 (978)
T ss_pred CCCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHHHHHHHcCCCcccccceeccc---c--ceeEEEEEe
Confidence 1234567888899999988888899999999999987777899999988887 4433212221 1 122555544
Q ss_pred EeChhhhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHH--HHHHHHh-cCCCCccccccccc
Q 001753 393 HLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDY--AAELAGN-LLIYPAEHVIYGEY 469 (1018)
Q Consensus 393 ~~~~~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~--~~~l~~~-~~~~~~~~~l~~~~ 469 (1018)
. ....+.++++-+.|++.|+.+.++|++++.++.++.....+..-. .+.+... ....... +++.+|.+.|....
T Consensus 345 ~--gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~-~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~~~ 421 (978)
T COG1026 345 K--GVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV-KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLD 421 (978)
T ss_pred c--CCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh-cCCCccHHHHHHhccccccCCChhhhhhhHH
Confidence 3 333368999999999999999999999999999988766654432 2233322 2222222 34456766665544
Q ss_pred cccCC---CHH--HHHHHHhh-cCcCc-eEEEEEeCCCC-CCCCccccceecceeeeecCChhHHHhhcCCCCC-CCccc
Q 001753 470 MYEVW---DEE--MIKHLLGF-FMPEN-MRIDVVSKSFA-KSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEI-DVSLQ 540 (1018)
Q Consensus 470 ~i~~~---t~~--~i~~~~~~-l~~~~-~~i~~~~p~~~-~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~~-~~~~~ 540 (1018)
.++.+ -.. .+++++++ +..++ ..++++-|+.. ..+..+++.- .+.--...++++.++++.+.... ...-.
T Consensus 422 ~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e-~L~~~~~~l~de~~~ki~~~~~~lke~Q~ 500 (978)
T COG1026 422 YLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERE-LLQKRSSELTDEDLEKIIKDSKKLKERQD 500 (978)
T ss_pred HHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHhhc
Confidence 43322 222 38899998 44444 56677778752 0111111100 01111123333323322211000 00000
Q ss_pred CC---CCCCCCCCCceeeccCCCCCCCCCCCCeEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHH
Q 001753 541 LP---SQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELF 617 (1018)
Q Consensus 541 lP---~~n~~ip~~~~l~~~~~~~~~~~~~~P~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~ 617 (1018)
-| ..+..+|+ +.+.+.+...+ ..+......+..+|.+.+-. +++.+++++..+....+.....+..||
T Consensus 501 ~~dse~~~~~lP~-l~~~dvp~~~~----k~~l~~~~~~~~~v~~~~~~----tn~i~yl~~~~~~~~l~~~llpyL~L~ 571 (978)
T COG1026 501 QPDSEEDLATLPT-LKLGDVPDPIE----KTSLETEVSNEAKVLHHDLF----TNGITYLRLYFDLDMLPSELLPYLPLF 571 (978)
T ss_pred CCCchhhhhhccc-cchhcCCCccc----ccceeeeccCCcceEEeecC----CCCeEEEEEEeecCCCChhhhhhHHHH
Confidence 11 11223443 33333332221 13334445667777444422 256788888777766677777888999
Q ss_pred HHHHHHHHHH-H-------hHHhhhcCcEEEEEEeC---------ceeEEEEeecCCCHHHHHHHHHHHHhcCCC-CHHH
Q 001753 618 IHLLKDELNE-I-------IYQASVAKLETSVSIFS---------DKLELKVYGFNDKLPVLLSKILAIAKSFLP-SDDR 679 (1018)
Q Consensus 618 ~~~l~~~~~~-~-------~~~~~~~g~~~~~~~~~---------~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~-~~~~ 679 (1018)
+.++....++ + .....++|++++.++.. ..+.+++..+.++.+++++++-+++.+..| |.++
T Consensus 572 ~~~l~~lgt~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~R 651 (978)
T COG1026 572 AFALTNLGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRER 651 (978)
T ss_pred HHHHHhcCCCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHH
Confidence 9888775432 1 12334578877777654 357888888999999999999999999999 7888
Q ss_pred HHHHHHHHHHHHHhcccC-hhhHHHHHHHHhhcCC--------CCCHHHHHHHhcc-----CC---HHHHHHHHHHHHhh
Q 001753 680 FKVIKEDVVRTLKNTNMK-PLSHSSYLRLQVLCQS--------FYDVDEKLSILHG-----LS---LADLMAFIPELRSQ 742 (1018)
Q Consensus 680 f~~~k~~~~~~~~~~~~~-p~~~a~~~~~~~l~~~--------~~~~~~~~~~l~~-----it---~edl~~~~~~~~~~ 742 (1018)
+..+-++++..+.+...+ ++..|.....+-+... +.+....+..|.+ .. .+.|++.+++++..
T Consensus 652 lkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~ 731 (978)
T COG1026 652 LKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQT 731 (978)
T ss_pred HHHHHHHHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhc
Confidence 888888889999888888 8888877666555432 1111222222211 11 34577778888888
Q ss_pred hceEEEEecCCCHHHHHHHH-HHHHhhhcCCC-CCc-cccccceeEEcCC-C-CeEEEEeccCCCCCcCcEEEEEEEecc
Q 001753 743 LYIEGLCHGNLSQEEAIHIS-NIFKSIFSVQP-LPI-EMRHQECVICLPS-G-ANLVRNVSVKNKCETNSVIELYFQIEQ 817 (1018)
Q Consensus 743 ~~~~~~v~Gni~~~~~~~l~-~~~~~~~~~~~-~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (1018)
.++.+++.|+++.... .+ +.+++...... .-. ...+......+.. . ...+ ...|.+.++...... .
T Consensus 732 ~n~~i~i~~~~~~~~~--~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----i~~p~a~~~l~fs~~-~-- 802 (978)
T COG1026 732 NNLRIAIIGDIDKILD--LLENPLLKFLEHLLPGFELPTPPKNPHLDLISSLSEATI----IPSPVAYNALAFSIG-G-- 802 (978)
T ss_pred CceEEEEecChhhhHH--HHHHHhhhhhcccCcccccCCCCCCcchhhhccccceEE----eccHHHHHHHhhhcc-C--
Confidence 8998999999875422 22 33333332100 000 0001111111111 1 1111 122332233222211 1
Q ss_pred ccCcccHHHHHHHHHHHHHhc-hhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHH
Q 001753 818 EKGMELTRLKALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDEL 896 (1018)
Q Consensus 818 ~~~~~~~~~~~~~~ll~~~l~-s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~~i~~~l~~~~~~ 896 (1018)
....+++.+++.++..+++ ..||.++|++ |+||+.++......|..++. |. ++|+ +.+..+.|.+.++.+
T Consensus 803 --~~y~hpd~~~l~vls~~L~~~~lw~~IR~~-GGAYGa~as~~~~~G~f~f~----sY-RDPn-~~kt~~v~~~~v~~l 873 (978)
T COG1026 803 --LPYTHPDYAALQVLSEYLGSGYLWNKIREK-GGAYGASASIDANRGVFSFA----SY-RDPN-ILKTYKVFRKSVKDL 873 (978)
T ss_pred --CCCCCccchHHHHHHHHhccchhHHHHHhh-ccccccccccccCCCeEEEE----ec-CCCc-HHHHHHHHHHHHHHH
Confidence 4566788999999999886 5899999996 78999999888877765544 32 5553 556666666666655
Q ss_pred H-cCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHHHHHHHhcccCCCCcc
Q 001753 897 L-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCR 975 (1018)
Q Consensus 897 ~-~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~~~~~k~l~p~~~~~~ 975 (1018)
. ..++++|++.++-++++.+.. +.++..++..-......+ ...+.++.++++|.+||++||.++.++|+.+- .+
T Consensus 874 ~s~~~~~~d~~~~ilg~i~~~d~-p~sp~~~~~~s~~~~~sg-~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~---~~ 948 (978)
T COG1026 874 ASGNFDERDLEEAILGIISTLDT-PESPASEGSKSFYRDLSG-LTDEERQAFRERLLDVTKEDIKEVMDKYLLNF---SS 948 (978)
T ss_pred HcCCCCHHHHHHHHHHhhccccc-ccCCcceehhhHHHHHhc-CCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc---cc
Confidence 5 479999999999999999875 455555543222222222 24578899999999999999999999999642 33
Q ss_pred EEEEEEecCCCCcch
Q 001753 976 RLAVRVWGCNTNIKE 990 (1018)
Q Consensus 976 ~l~v~v~G~~~~~~~ 990 (1018)
.-+++++|....+.|
T Consensus 949 e~~i~~~~~~e~~~e 963 (978)
T COG1026 949 ENSIAVFAGEEKPQE 963 (978)
T ss_pred cceEEEEechhhhhh
Confidence 566666665443333
No 7
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-52 Score=448.03 Aligned_cols=837 Identities=14% Similarity=0.071 Sum_probs=583.4
Q ss_pred eCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHh-cCCcceeeeCCCceEEEEE-eChhhHHHHHHHHHhhc
Q 001753 105 VGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK-HGGSSNAYTETEHTCYHFE-IKREFLKGALMRFSQFF 182 (1018)
Q Consensus 105 ~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~-~g~~~na~t~~~~t~~~~~-~~~~~l~~~L~~~~~~~ 182 (1018)
+.++.+..|++..|+.|+|||.++|||.+||-++.|.++|.+ ....+||+|..|+|.|.|. +.+++|.++.+++.|..
T Consensus 77 FsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~yPfattN~kDf~NL~dVYLDAt 156 (998)
T KOG2019|consen 77 FSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFYPFATTNTKDFYNLRDVYLDAT 156 (998)
T ss_pred eEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcceeecccCChHHHHHHHHHhhhcc
Confidence 344556789999999999999999999999999999999976 5668999999999999997 56789999999999999
Q ss_pred cCCCCChhHHHHH------------------HHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhh
Q 001753 183 ISPLMKVEAMERE------------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAME 244 (1018)
Q Consensus 183 ~~p~~~~~~~~~e------------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~ 244 (1018)
+.|.+.+.+|.+| +++|.+||+...+++++.++..++..++|++.|+-.+.|++-.|.+
T Consensus 157 ffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~SGGDPl~Ipd--- 233 (998)
T KOG2019|consen 157 FFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVNSGGDPLDIPD--- 233 (998)
T ss_pred cchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCccccccccCCCCcccCcc---
Confidence 9999999999998 7899999999999999999999999999999999999999999999
Q ss_pred cCccHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEE-EE------e
Q 001753 245 KGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFR-LE------A 317 (1018)
Q Consensus 245 ~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~-~~------~ 317 (1018)
++.++|++||++||+|+|+.+.-+||++++++...+++.|+..-+.....+.. ....+...+.+. .- .
T Consensus 234 ---Lt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~--~qk~f~kp~rvve~~p~d~~~~ 308 (998)
T KOG2019|consen 234 ---LTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVT--FQKLFDKPRRVVEKGPADPGDL 308 (998)
T ss_pred ---ccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCccc--cccccccCceeeeecCCCCCCC
Confidence 99999999999999999999999999999999999988776653332221111 123343332222 21 1
Q ss_pred cccccEEEEEEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChh
Q 001753 318 VKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDS 397 (1018)
Q Consensus 318 ~~~~~~l~i~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~ 397 (1018)
...+...++.|-.+...+.++..++.+|++++-++..+.+++.|.+.|+....+...+.. ..+..+.|+|.+.-..
T Consensus 309 p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~---~~t~~~~fsVGLqGvs- 384 (998)
T KOG2019|consen 309 PKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYE---DTTLQPQFSVGLQGVS- 384 (998)
T ss_pred ccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCC---cccccceeeeeecccc-
Confidence 234566778888888888888999999999999988888999999999886554433332 1234558888775433
Q ss_pred hhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhc-CCCCccccccccccccCC--
Q 001753 398 GLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNL-LIYPAEHVIYGEYMYEVW-- 474 (1018)
Q Consensus 398 g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~~i~~~-- 474 (1018)
.++++.+.+.|...++.+.+.||+.+.+++..+.++...+.+...-...++..+...+ +..+|-+++.+...++.+
T Consensus 385 -eediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~ 463 (998)
T KOG2019|consen 385 -EEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQ 463 (998)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHH
Confidence 2689999999999999999999999999998777666655443322233444444444 345777777765555432
Q ss_pred -----CHHHHHHHHhh-c-CcCceEEEEEeCCCC-CCCCccccceecceeeeecCChhHHHhhcCCCC-CCCcccCCCCC
Q 001753 475 -----DEEMIKHLLGF-F-MPENMRIDVVSKSFA-KSQDFHYEPWFGSRYTEEDISPSLMELWRNPPE-IDVSLQLPSQN 545 (1018)
Q Consensus 475 -----t~~~i~~~~~~-l-~~~~~~i~~~~p~~~-~~~~~~~e~~~~~~y~~~~i~~~~l~~~~~~~~-~~~~~~lP~~n 545 (1018)
.+.-++.++++ + ++.++.++.+.|+.+ ......+|+ -..+-.++.+.++.++++..... .....+-|..-
T Consensus 464 ~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e~~~~~~~eE~-tkL~ek~~alteeD~~ei~k~~~eL~~kQ~tp~dl 542 (998)
T KOG2019|consen 464 RLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPEFAEKLEQEEA-TKLEEKKAALTEEDLAEIAKAGEELREKQSTPEDL 542 (998)
T ss_pred HHhhhchhHHHHHHHHHHhcCCceEEEEecCCchhhHHHHHHHH-HHHHHHHhhCCHHHHHHHHHHHHHHHHhhCCcccc
Confidence 45568888888 3 333345556666531 011111111 13344455666655555533211 01112234444
Q ss_pred CCCCCCceeeccCCCCCCCCCCCCeEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHH
Q 001753 546 EFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDEL 625 (1018)
Q Consensus 546 ~~ip~~~~l~~~~~~~~~~~~~~P~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 625 (1018)
.|+|+ +.+.+++...+ -.|..+.+.+|+++.+.-..+ ++.++++..++....+.+...+.+|||+.+....
T Consensus 543 sClPt-L~vsDIp~~~~----~~~~~v~dingvkv~~~dl~t----ngi~Y~r~~~~l~~~p~eL~PylPlfc~sll~lG 613 (998)
T KOG2019|consen 543 SCLPT-LNVSDIPKTIP----YTKLEVGDINGVKVQRCDLFT----NGITYTRVVFDLNSLPEELLPYLPLFCQSLLNLG 613 (998)
T ss_pred ccccc-cccccCCCCCC----ccceeeeeccCceeEEeeccC----CceEEEEEeeccccCcHHhhcchHHHHHHHHhcC
Confidence 56664 55544443322 245567788999994443222 5789999999888777777888999999887643
Q ss_pred H------H--HhHHhhhcCcEEEEEEeCc--------eeEEEEeecCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHH
Q 001753 626 N------E--IIYQASVAKLETSVSIFSD--------KLELKVYGFNDKLPVLLSKILAIAKSFLPS-DDRFKVIKEDVV 688 (1018)
Q Consensus 626 ~------~--~~~~~~~~g~~~~~~~~~~--------g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~-~~~f~~~k~~~~ 688 (1018)
. + ......++|++.+..+..+ ++.++-+.+..+.+.+++++..++.++.|. ++.|.....+..
T Consensus 614 t~~lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~ 693 (998)
T KOG2019|consen 614 TGDLSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSA 693 (998)
T ss_pred CCcccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHH
Confidence 2 2 2334567899888877652 344444445678999999999999999996 688999988999
Q ss_pred HHHHhcccC-hhhHHHHHHHHhhcCCCCCHH--------HHHHHhccCC-------HHHHHHHHHHHHhhhceEEEEecC
Q 001753 689 RTLKNTNMK-PLSHSSYLRLQVLCQSFYDVD--------EKLSILHGLS-------LADLMAFIPELRSQLYIEGLCHGN 752 (1018)
Q Consensus 689 ~~~~~~~~~-p~~~a~~~~~~~l~~~~~~~~--------~~~~~l~~it-------~edl~~~~~~~~~~~~~~~~v~Gn 752 (1018)
.++.+...+ .+..|..++.+.+....|-.+ +.+..|+... .+.|.+..+.++..+++.+.|..+
T Consensus 694 s~~~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd 773 (998)
T KOG2019|consen 694 SRMTNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITAD 773 (998)
T ss_pred HHhhccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 999988877 677777666666666555432 1223333222 344566666778888999999877
Q ss_pred CC-HHHHHHHHHHHHhhhc-CCCCCccccccceeEEcCCCCeEEEEeccCCCCCcCcEEEEEEEeccccCcccHHHHHHH
Q 001753 753 LS-QEEAIHISNIFKSIFS-VQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALI 830 (1018)
Q Consensus 753 i~-~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1018)
=. ...+.+.+++++..++ +.|.+... ... ..++-+.... ++..+. .+++.+-.... . .+..+++-+.+
T Consensus 774 ~~q~~~vEkav~kFl~~lp~e~p~g~~s--t~d-~r~p~~~~~i-~~~~P~-fqvnyvgka~~-~----vpyt~~d~asl 843 (998)
T KOG2019|consen 774 PKQLTNVEKAVEKFLDSLPRENPSGSKS--TWD-ARLPLRSEAI-RVVIPT-FQVNYVGKAGL-G----VPYTHPDGASL 843 (998)
T ss_pred cccchhHHHHHHHHHHhccccCCCCCcc--Ccc-ccCCCCceeE-EEeccc-cchhhhhhhcc-c----ccCCCCCCcHH
Confidence 43 3567788899988887 33332211 110 0111111111 111210 22333222211 1 34566777888
Q ss_pred HHHHHHhc-hhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Q 001753 831 DLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELL-EGLDDESFENY 908 (1018)
Q Consensus 831 ~ll~~~l~-s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~~i~~~l~~~~~~~-~~is~~el~~a 908 (1018)
.+++..++ ..|+.++|+| |.+|+-+|.+....|+.+|. |. ++|+ ..+.++.|-..-.-++ .++++++|++|
T Consensus 844 ~vlS~~lt~k~Lh~evRek-GGAYGgg~s~~sh~GvfSf~----SY-RDpn-~lktL~~f~~tgd~~~~~~~~~~dldeA 916 (998)
T KOG2019|consen 844 QVLSKLLTNKWLHDEVREK-GGAYGGGCSYSSHSGVFSFY----SY-RDPN-PLKTLDIFDGTGDFLRGLDVDQQDLDEA 916 (998)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCccCCccccccccceEEEE----ec-cCCc-hhhHHHhhcchhhhhhcCCccccchhhh
Confidence 88988876 4788999997 67999999999988875553 44 5564 4455665554433333 46999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCc
Q 001753 909 RSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNI 988 (1018)
Q Consensus 909 k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~ 988 (1018)
|-++++.... +..+.... +...+. +...+.++..+++|-+++..|+.+++.+|+. ...+...|.|.|++...
T Consensus 917 kl~~f~~VDa-p~~P~~kG--~~~fl~--gvtDemkQarREqll~vSl~d~~~vae~yl~---~~~~~~~vav~g~E~~~ 988 (998)
T KOG2019|consen 917 KLGTFGDVDA-PQLPDAKG--LLRFLL--GVTDEMKQARREQLLAVSLKDFKAVAEAYLG---VGDKGVAVAVAGPEDID 988 (998)
T ss_pred hhhhcccccC-CcCCcccc--hHHHHh--cCCHHHHHHHHHHHHhhhHHHHHHHHHHHhc---cCCcceEEEeeCccCcc
Confidence 9999998764 44554444 212221 2456788999999999999999999999994 33456888888887754
Q ss_pred c
Q 001753 989 K 989 (1018)
Q Consensus 989 ~ 989 (1018)
+
T Consensus 989 ~ 989 (998)
T KOG2019|consen 989 A 989 (998)
T ss_pred h
Confidence 4
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=1.3e-47 Score=440.47 Aligned_cols=410 Identities=20% Similarity=0.206 Sum_probs=341.2
Q ss_pred CCccccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhcccccccccc
Q 001753 18 PNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTK 97 (1018)
Q Consensus 18 ~~~~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1018)
+.+.. ++..+|+||+++++.+++.. +
T Consensus 12 ~~~~~-~~~~~L~nGl~~~~~~~~~~--------------~--------------------------------------- 37 (438)
T COG0612 12 PALPG-LQVFTLPNGLRVITYPNPTA--------------P--------------------------------------- 37 (438)
T ss_pred ccccc-ceEEEcCCCCEEEEEeCCCC--------------C---------------------------------------
Confidence 34444 88999999999999999987 7
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHH
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMR 177 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~ 177 (1018)
.+++.+++++|+..++.+..|+|||+|||+|.||++++. .++.+.++..||..||+|+.|+|.|++++.+++++.+|++
T Consensus 38 ~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~-~~i~~~~~~~G~~~na~ts~d~t~y~~~~l~~~~~~~l~l 116 (438)
T COG0612 38 TVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPS-AELAEAFEKLGGQLNAFTSFDYTVYYLSVLPDNLDKALDL 116 (438)
T ss_pred EEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCCh-HHHHHHHHHhcCeeeccccchhhhhhhhhchhhhHHHHHH
Confidence 999999999999999999999999999999999999997 4899999999999999999999999999889999999999
Q ss_pred HHhhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHHH
Q 001753 178 FSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLY 257 (1018)
Q Consensus 178 ~~~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~ 257 (1018)
+++++.+|.|++++|++||+++.+|+++..++|.+++...+...+|++|||+++.+|+.++|.+ +++++|++||
T Consensus 117 lad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~------it~~dl~~f~ 190 (438)
T COG0612 117 LADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEA------ITREDLKDFY 190 (438)
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHh------CCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEEEE----ecccccEEEEEEecCCc
Q 001753 258 MNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE----AVKDVHILDLTWTLPCL 333 (1018)
Q Consensus 258 ~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~i~~~~p~~ 333 (1018)
++||+|+||+|+|+||++.+++.++++++|++|+....+.+.. ..++....+++.+. +...+..+.++++.+..
T Consensus 191 ~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 268 (438)
T COG0612 191 QKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPPKIP--PEPPLGPERVVRVNDPEQPDLEQAWLALGYPGPDY 268 (438)
T ss_pred HHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCCCCC--CccccCCCceEEecCCCCchhhhhhhhccccCcCc
Confidence 9999999999999999999999999999999999722222211 21333344444432 23345566666666664
Q ss_pred hhhhhcCcHHHHHHHhcCCCCCcHHHHHH-hcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHHHH
Q 001753 334 HQEYLKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQY 412 (1018)
Q Consensus 334 ~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr-~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~ 412 (1018)
....+..++.+++.+||++..++|+..+| ++||+|++++...... +.+.+.+.+.+.. .+.+.+.+.|.+.
T Consensus 269 ~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~i~~~ 340 (438)
T COG0612 269 DSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLS-----DSGLFSIYAGTAP---ENPEKTAELVEEI 340 (438)
T ss_pred CcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccccc-----ccCCceEEEEecC---CChhhHHHHHHHH
Confidence 43234578899999999988899999999 8899999987544321 2347777777765 5667777777777
Q ss_pred HHHHHhcC---CchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCC-CCccccccccccccCCCHHHHHHHHhh-cC
Q 001753 413 IKLLRQVS---PQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI-YPAEHVIYGEYMYEVWDEEMIKHLLGF-FM 487 (1018)
Q Consensus 413 l~~l~~~~---i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~l~~~~~i~~~t~~~i~~~~~~-l~ 487 (1018)
+..+++.+ +++++++.+|......+....+ ++...+..+...... .+..........++++|+++|++++++ +.
T Consensus 341 ~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~~ 419 (438)
T COG0612 341 LKALKKGLKGPFTEEELDAAKQLLIGLLLLSLD-SPSSIAELLGQYLLLGGSLITLEELLERIEAVTLEDVNAVAKKLLA 419 (438)
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHhhhccC-CHHHHHHHHHHHHHhcCCccCHHHHHHHHHhcCHHHHHHHHHHhcC
Confidence 77776664 8999999999988887766554 556566666655544 344555566778999999999999999 66
Q ss_pred cCceEEEEEeCC
Q 001753 488 PENMRIDVVSKS 499 (1018)
Q Consensus 488 ~~~~~i~~~~p~ 499 (1018)
+++..+++++|.
T Consensus 420 ~~~~~~~~~~p~ 431 (438)
T COG0612 420 PENLTIVVLGPE 431 (438)
T ss_pred CCCcEEEEEccc
Confidence 777899999985
No 9
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-45 Score=372.66 Aligned_cols=408 Identities=15% Similarity=0.126 Sum_probs=344.1
Q ss_pred cccccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccccccccccceE
Q 001753 21 KRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAA 100 (1018)
Q Consensus 21 ~~~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (1018)
.+.-++-+|+||++|..-++ .. . .++
T Consensus 31 ~P~t~vttL~NGlrVaTE~~-~a--------------~---------------------------------------TAT 56 (467)
T KOG0960|consen 31 VPETEVTTLPNGLRVATEHN-SA--------------S---------------------------------------TAT 56 (467)
T ss_pred CCcceEEEcCCCcEEEeccC-CC--------------c---------------------------------------ceE
Confidence 34567889999999999888 44 4 999
Q ss_pred EEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHh
Q 001753 101 AAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQ 180 (1018)
Q Consensus 101 ~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~~~~ 180 (1018)
+.+++.+||++|.+...|.|||||||+|+||++.+. ..+...++..|+++||||++|+|.||+.+.+++++.++++|+|
T Consensus 57 VGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~-~alElEieniGahLNAytSReqT~yyakal~~dv~kavdiLaD 135 (467)
T KOG0960|consen 57 VGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQ-AALELEIENIGAHLNAYTSREQTVYYAKALSKDVPKAVDILAD 135 (467)
T ss_pred EEEEeccCccccccccccHHHHHHHHHhcCCCcchh-HHHHHHHHHHHHHhcccccccceeeehhhccccchHHHHHHHH
Confidence 999999999999999999999999999999999998 6899999999999999999999999999999999999999999
Q ss_pred hccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHHHHhc
Q 001753 181 FFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNY 260 (1018)
Q Consensus 181 ~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~ 260 (1018)
++.+..+.+..|++||++|..|++....+-..+.++.++..+|.++|+++.+.|..+.|++ ++++||++|-+.|
T Consensus 136 Ilqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI~s------i~r~DL~~yi~th 209 (467)
T KOG0960|consen 136 ILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENIKS------ISRADLKDYINTH 209 (467)
T ss_pred HHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhhhh------hhHHHHHHHHHhc
Confidence 9999999999999999999999999888888999999999999999999999999999999 9999999999999
Q ss_pred CCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEEEEecccccEEEEEEecCCchhhhhcC
Q 001753 261 YQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKK 340 (1018)
Q Consensus 261 y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~p~~~~~~~~~ 340 (1018)
|.+.+|+|+.+|.++++++.+++++||++++....+..+...+.+.+.+..+....+..|.+++.|.+.+.++.+. ++.
T Consensus 210 Y~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~~~~FtgsEvR~rdd~lP~a~~AiAVEG~~w~~p-D~~ 288 (467)
T KOG0960|consen 210 YKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVPPARFTGSEVRVRDDDLPLAHIAIAVEGVSWAHP-DYF 288 (467)
T ss_pred ccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCCCccccCceeeecCCCCchhheeeeEecCCcCCc-cHH
Confidence 9999999999999999999999999999987533222111112133545555555667788999999999886644 678
Q ss_pred cHHHHHHHhcC---------CCCCcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHHH
Q 001753 341 SEDYLAHLLGH---------EGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQ 411 (1018)
Q Consensus 341 ~~~~l~~iLg~---------~~~~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~ 411 (1018)
++.+.+.|+|+ -.+++|.+.+.+..++-++.++... + .+.|+|++++.+.+ ...+++++..+..
T Consensus 289 ~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l~~sfqsFnt~-Y----kDTGLwG~y~V~~~--~~~iddl~~~vl~ 361 (467)
T KOG0960|consen 289 ALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQSFNTS-Y----KDTGLWGIYFVTDN--LTMIDDLIHSVLK 361 (467)
T ss_pred HHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHHHHHHhhhhcc-c----ccccceeEEEEecC--hhhHHHHHHHHHH
Confidence 99999999986 1134566666666778776654433 3 35569999999843 2789999999999
Q ss_pred HHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccc-cccccccCCCHHHHHHHHhh-cCcC
Q 001753 412 YIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVI-YGEYMYEVWDEEMIKHLLGF-FMPE 489 (1018)
Q Consensus 412 ~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l-~~~~~i~~~t~~~i~~~~~~-l~~~ 489 (1018)
++.+|.. .+++.|++++|+.++.++....+. .-..+..++..+..++..-.+ +....|+++|..+|++++.+ +-..
T Consensus 362 eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ldg-ttpi~ediGrqlL~~Grri~l~El~~rId~vt~~~Vr~va~k~iyd~ 439 (467)
T KOG0960|consen 362 EWMRLAT-SVTEAEVERAKNQLKTNLLLSLDG-TTPIAEDIGRQLLTYGRRIPLAELEARIDAVTAKDVREVASKYIYDK 439 (467)
T ss_pred HHHHHHh-hccHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHhhcCCcCChHHHHHHHhhccHHHHHHHHHHHhhcC
Confidence 9999976 699999999999999997765553 334688899888776543322 34567999999999999998 6677
Q ss_pred ceEEEEEeCC
Q 001753 490 NMRIDVVSKS 499 (1018)
Q Consensus 490 ~~~i~~~~p~ 499 (1018)
.+.+..+||-
T Consensus 440 ~iAia~vG~i 449 (467)
T KOG0960|consen 440 DIAIAAVGPI 449 (467)
T ss_pred Ccceeeeccc
Confidence 8888888885
No 10
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-38 Score=335.44 Aligned_cols=846 Identities=14% Similarity=0.112 Sum_probs=498.5
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEe-ChhhHHHHHH
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEI-KREFLKGALM 176 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~-~~~~l~~~L~ 176 (1018)
.+.-++.|..-.. +..|+.|-|||++|+||++||-.+-+..+-...-++.||+|+.|+|.|..+. -.+.|-.+|-
T Consensus 41 ~vhG~f~v~TEa~----~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDtD~T~YtLStag~dGFlklLP 116 (1022)
T KOG0961|consen 41 MVHGAFSVVTEAD----SDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDTDHTAYTLSTAGSDGFLKLLP 116 (1022)
T ss_pred ceeeeEEeeeeec----CCCCCchhHHHHhhhccccCCcccHHHHhhcchhcccccccccCcceEEeecccccchHHHhH
Confidence 7888888776544 4679999999999999999998655555555556789999999999999985 5688999999
Q ss_pred HHHhhccCCCCChhHHHHH----------HHHHHHHHHhhcCChHHHHHHHHHhhCCC-CCCCCccccCchhccchhhhc
Q 001753 177 RFSQFFISPLMKVEAMERE----------VLAVDSEFNQALQNDACRLQQLQCHTSQL-GHAFNKFFWGNKKSLIGAMEK 245 (1018)
Q Consensus 177 ~~~~~~~~p~~~~~~~~~e----------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~G~~~~l~~~~~~ 245 (1018)
++.+.+.+|.++.+++..| .++|.+||+..++.-.+.+....+..+|| .++|...+.|.+..|+.
T Consensus 117 vy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eTGG~~knLR~---- 192 (1022)
T KOG0961|consen 117 VYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVETGGRLKNLRE---- 192 (1022)
T ss_pred HHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCceeccCCChhhHHH----
Confidence 9999999999999999987 57999999998888888888999998885 78999999999999998
Q ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCC-CCCccc----cccccc-cc-eEEEEE--
Q 001753 246 GINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQI-KPQFTV----EGTIWK-AC-KLFRLE-- 316 (1018)
Q Consensus 246 ~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~-~~~~~~----~~~~~~-~~-~~~~~~-- 316 (1018)
++.+.+++||+++|+++|||++|.|.++.+++....+..-..++..... ++.++. ...+.. .. ....+.
T Consensus 193 --lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp 270 (1022)
T KOG0961|consen 193 --LTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFP 270 (1022)
T ss_pred --hhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCccceeeeecC
Confidence 9999999999999999999999999999999998877655444332221 111210 001111 11 111121
Q ss_pred -ecccccEEEEEEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHH--hcCccceecccccCccCCccccceEEEEEEE
Q 001753 317 -AVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLK--GRGWATSISAGVGDEGMHRSSIAYIFVMSIH 393 (1018)
Q Consensus 317 -~~~~~~~l~i~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr--~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~ 393 (1018)
.+..+..|.++|-+++..+-+...++++|...|....-..+-+.+. +.-+|.+++.+.....+. ...+.+.
T Consensus 271 ~~Des~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~vrc------~i~L~f~ 344 (1022)
T KOG0961|consen 271 TDDESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEGVRC------DIRLNFA 344 (1022)
T ss_pred CcccccceEEEEEcCCCHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecccce------eEEEeec
Confidence 2345778999999999888777789999999999866665666554 677888887766653221 3333333
Q ss_pred eChhhhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCC-CcHHHHHHHHHhcCCCCcc--------cc
Q 001753 394 LTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQ-PQDDYAAELAGNLLIYPAE--------HV 464 (1018)
Q Consensus 394 ~~~~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--------~~ 464 (1018)
.-| .+.++.....+++.+. ....|+-+.........+.++....+. .+..+...+.....+++.+ .-
T Consensus 345 gVP--~EKi~~~~~k~l~~l~--et~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~lk~ 420 (1022)
T KOG0961|consen 345 GVP--VEKIDECAPKFLDKLV--ETANIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRLKE 420 (1022)
T ss_pred CCc--HHHhhhhhHHHHHHHH--HhcccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHHHh
Confidence 223 2555655555544443 345576655555444444444433333 2344555444333222211 11
Q ss_pred ccccccccCCCHHHHHHHHhhcCc-CceEEEEEeCCCCCCCCc-cccceecceeeeecCCh----hHHHhhcCCCCCCCc
Q 001753 465 IYGEYMYEVWDEEMIKHLLGFFMP-ENMRIDVVSKSFAKSQDF-HYEPWFGSRYTEEDISP----SLMELWRNPPEIDVS 538 (1018)
Q Consensus 465 l~~~~~i~~~t~~~i~~~~~~l~~-~~~~i~~~~p~~~~~~~~-~~e~~~~~~y~~~~i~~----~~l~~~~~~~~~~~~ 538 (1018)
+++...+.++...|+.++++++.. .+..+++..|.+. .... .+|+--...-.-+.+.+ +..+++.+... ...
T Consensus 421 l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia~Ps~e-m~e~i~kE~~~~i~~r~~~lg~~gle~l~k~L~~ak~-~N~ 498 (1022)
T KOG0961|consen 421 LDFLKKLKSWPAKDWVQLLNKYFVENPSATVIAVPSEE-MVEKIAKEEEKRIAARCEKLGKKGLEELGKSLEAAKL-ENT 498 (1022)
T ss_pred HHHHHHHhhccHHHHHHHHHHHhccCCCeEEEecCcHH-HHHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHhhh-ccc
Confidence 334456788999999999999554 4455566667751 0000 00000000000011111 11122211100 000
Q ss_pred ccCCCC--CCC-C--CCCceeeccC--CCCCCCCCC----CCeEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCC
Q 001753 539 LQLPSQ--NEF-I--PTDFSIRAND--ISNDLVTVT----SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDN 607 (1018)
Q Consensus 539 ~~lP~~--n~~-i--p~~~~l~~~~--~~~~~~~~~----~P~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~ 607 (1018)
-.+|.. ..| | |+.+...+.. .......+. .|.+-..-.....+..-+ ..|..+|.++|.-.....+
T Consensus 499 ~~~p~~ll~~f~I~~peS~ef~~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~fi~l~---h~ps~Fvel~fl~dss~i~ 575 (1022)
T KOG0961|consen 499 ANHPSALLLDFLIVKPESLEFFDRFPVQTLTSNSPFDNELTPQQSTFLAQFPFFINLH---HCPSKFVELFFLLDSSNIS 575 (1022)
T ss_pred CCCCHHHHhheeccCchheeeeeccceeeccCCCCCCccccceeecccccCCceeecc---cCchHHHhHhhhhccccCc
Confidence 111110 000 0 1111111100 000000010 111111111111111111 1234455555543333222
Q ss_pred HHHHHHHHHHHHHHHHH---H------------HHHhHH--hhhcCcEEEEEEeC---ceeEEEEeecCCCHHHHHHHHH
Q 001753 608 VKNCILTELFIHLLKDE---L------------NEIIYQ--ASVAKLETSVSIFS---DKLELKVYGFNDKLPVLLSKIL 667 (1018)
Q Consensus 608 ~~~~~~~~l~~~~l~~~---~------------~~~~~~--~~~~g~~~~~~~~~---~g~~l~~~g~s~~l~~~l~~l~ 667 (1018)
.....+..+|..++... + ++.... ......+++.++.+ +-+.+.+..-.++.+..+.++-
T Consensus 576 ~sl~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~lvn~~Ikv~a~~Y~~~v~Wi~ 655 (1022)
T KOG0961|consen 576 ISLRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRLVNLRIKVGADKYPLLVKWIQ 655 (1022)
T ss_pred hhhhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccchhheeEEEEEccCCcchhHHHHH
Confidence 33334455555554331 1 111111 11223333333332 4488888888999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCCH-----HHHHHH----hccC---CHHHH
Q 001753 668 AIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYDV-----DEKLSI----LHGL---SLADL 732 (1018)
Q Consensus 668 ~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~~---~~~~-----~~~~~~----l~~i---t~edl 732 (1018)
-+++...||++++...-++++.++..++.|.-..+.......++.. .++. +..++. +++= -++.+
T Consensus 656 ~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~L~~Ek~l~ei~~~v~n~~~~Il~~~ 735 (1022)
T KOG0961|consen 656 IFLQGVVFDPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDELVLEKLLEEISKDVMNNPEAILEKL 735 (1022)
T ss_pred HHhhhhccCHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999999999999998885544444444445432 1221 112222 2110 02223
Q ss_pred HHHHHHHHhhhceEEEEecCCCHH-HHHHHHHHHHhhhcCCCCCccccc------cceeEEcCCCCeEEEEeccCCCCCc
Q 001753 733 MAFIPELRSQLYIEGLCHGNLSQE-EAIHISNIFKSIFSVQPLPIEMRH------QECVICLPSGANLVRNVSVKNKCET 805 (1018)
Q Consensus 733 ~~~~~~~~~~~~~~~~v~Gni~~~-~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1018)
.+..+-.+..+.+.+.|+|||+.- +...-.....+....+ .|..+.. ......+.++....+ ...|+..
T Consensus 736 e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~-nP~~~f~~tf~~~~~~s~e~gsssk~~~---I~~p~sE 811 (1022)
T KOG0961|consen 736 EQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFG-NPGHQFSATFEAGENVSLELGSSSKELL---IGVPGSE 811 (1022)
T ss_pred HHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccC-CchhhcccccccCcccceeccCCcceeE---ecCCCcc
Confidence 332221344568999999998862 2222222222211111 1111111 111222222222211 1223333
Q ss_pred CcEEEEEEEeccccCcccHHHHHHHHHHHHHh---chhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHH
Q 001753 806 NSVIELYFQIEQEKGMELTRLKALIDLFDEIL---EEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYL 882 (1018)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l---~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~ 882 (1018)
.+-++...... ..+..+..+...|+++.+ ..+||+.+|.. ||+|++........+..++.++ .. .++.+.
T Consensus 812 Ss~l~~sip~~---~~w~dpel~~~~l~~~YL~~~eGPfW~~IRG~-GLAYGanm~~~~d~~~~~~~iy--r~-ad~~ka 884 (1022)
T KOG0961|consen 812 SSFLYQSIPLD---ANWNDPELIPAMLFGQYLSQCEGPFWRAIRGD-GLAYGANMFVKPDRKQITLSIY--RC-ADPAKA 884 (1022)
T ss_pred ccceeeecccc---cccCCcchhHHHHHHHHHHhcccchhhhhccc-chhccceeEEeccCCEEEEEee--cC-CcHHHH
Confidence 33332222121 345667788888888876 47999999985 8999988888877777777665 33 567777
Q ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHH-HHHhcCCCCCCccHHHHHHHhcCCHHHHH
Q 001753 883 QERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKD-PSLTYESNRFW-NQITDKRYMFDQSQKEAEDLKSIKKNDVI 960 (1018)
Q Consensus 883 ~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~-~s~~~~~~~~~-~~i~~~~~~f~~~~~~~~~i~~vT~edv~ 960 (1018)
.++-+.+++.+..--..+++.+|+.||.+.+..+.... ......+..+- ..+... +.+....+.++|..||.+|+.
T Consensus 885 ye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~~~~l~~~~q~--~~~fn~~~leri~nvT~~~~~ 962 (1022)
T KOG0961|consen 885 YERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAKISILNNFRQT--PHPFNIDLLERIWNVTSEEMV 962 (1022)
T ss_pred HHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHHHHHHHHHHhc--CCcccHHHHHHHHHhhHHHHH
Confidence 77777877776543346999999999999998876533 33333343332 333333 344556799999999999999
Q ss_pred HHHHHhcccCCCCccEEEEEE
Q 001753 961 SWYKTYLQQWSPKCRRLAVRV 981 (1018)
Q Consensus 961 ~~~~k~l~p~~~~~~~l~v~v 981 (1018)
+..+.|+.+-......+.++-
T Consensus 963 ~~~~~y~~~~Fds~~~va~i~ 983 (1022)
T KOG0961|consen 963 KIGGPYLARLFDSKCFVASIA 983 (1022)
T ss_pred HhcccceehhhcccCceEEEe
Confidence 999999876544443344433
No 11
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-38 Score=318.26 Aligned_cols=398 Identities=14% Similarity=0.123 Sum_probs=333.8
Q ss_pred cccEEEecCCCEEEEEeCCCCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccccccccccceEEE
Q 001753 23 LYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAA 102 (1018)
Q Consensus 23 ~~~~~~L~NGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1018)
..+.-+|+|||+|..-..+.. .+++.
T Consensus 24 ~~kvttL~NGlkvase~~pg~------------------------------------------------------f~~vG 49 (472)
T KOG2067|consen 24 NTKVTTLPNGLKVASENTPGQ------------------------------------------------------FCTVG 49 (472)
T ss_pred cceeeecCCccEEeccCCCCC------------------------------------------------------ceEEE
Confidence 688899999999988777754 99999
Q ss_pred EEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhc
Q 001753 103 MCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFF 182 (1018)
Q Consensus 103 l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~~~~~~ 182 (1018)
+.+++||++|.+...|++||+|.|.|..|.+++.. ++...|+.+||...+.|++|.+.|.+++.++.++.++.+++|.+
T Consensus 50 lyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~-ei~~~LE~~GGn~~cqsSRetm~Yaas~~~~~v~sm~~lLadtV 128 (472)
T KOG2067|consen 50 LYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSK-EILAELEKLGGNCDCQSSRETMMYAASADSDGVDSMVELLADTV 128 (472)
T ss_pred EEEecCccccCcCcccHHHHHHHHhhccccCCcHH-HHHHHHHHhCCcccccccHhhhHHHHHhhhcccHHHHHHHHHHH
Confidence 99999999999999999999999999999999995 99999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHHHHhcCC
Q 001753 183 ISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQ 262 (1018)
Q Consensus 183 ~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~ 262 (1018)
.+|.|++++++.++.+|.-|+...-.+|.-.+.+.++.++|.+.+.+.+..+..+.+.. ++.+.|.+|-+++|+
T Consensus 129 ~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~i~~------I~~~~l~~yl~~~yt 202 (472)
T KOG2067|consen 129 LNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEENIDK------INREVLEEYLKYFYT 202 (472)
T ss_pred hcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhhhhh------hhHHHHHHHHHhcCC
Confidence 99999999999999999999988878899999999999999999999998888999998 999999999999999
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceE------EEEEecccccEEEEEEecCCchhh
Q 001753 263 GGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKL------FRLEAVKDVHILDLTWTLPCLHQE 336 (1018)
Q Consensus 263 p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~i~~~~p~~~~~ 336 (1018)
|++|++.-+| ++++++.+.++++|+++|+...++..- +..-+.++.. -.+.....-+++.++|..++..+.
T Consensus 203 p~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~--~~aQYtGG~~~~~~d~~~~~~g~EltHv~lg~Eg~~~~de 279 (472)
T KOG2067|consen 203 PERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDE--SKAQYTGGELKIDTDAPQVTGGPELTHVVLGFEGCSWNDE 279 (472)
T ss_pred hhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCccc--chhhccccccccCCCCccccCccceeeeeEeeccCCCCCh
Confidence 9999999999 899999999999999999865433221 1111222211 011112245789999999887655
Q ss_pred hhcCcHHHHHHHhcCCCC-----------CcHHHHHH-hcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHH
Q 001753 337 YLKKSEDYLAHLLGHEGR-----------GSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFD 404 (1018)
Q Consensus 337 ~~~~~~~~l~~iLg~~~~-----------~~L~~~Lr-~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 404 (1018)
+..++-+|+.++|||++ ++||..+- +..|.|+..++...+ ++.|+|+|+..+.| +++.+
T Consensus 280 -D~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy-----~DtGlfgi~~s~~P---~~a~~ 350 (472)
T KOG2067|consen 280 -DFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSY-----SDTGLFGIYASAPP---QAAND 350 (472)
T ss_pred -hHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccc-----cCCceeEEeccCCH---HHHHH
Confidence 77899999999998654 44665555 788999988766542 35679999999988 88999
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCC----CccccccccccccCCCHHHHH
Q 001753 405 IIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIY----PAEHVIYGEYMYEVWDEEMIK 480 (1018)
Q Consensus 405 ~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~l~~~~~i~~~t~~~i~ 480 (1018)
++..+-+++..+. .+++++++++||..++..+.+..++.+. ..+.++.+.+.+ ++++++ ..|+++|++||.
T Consensus 351 aveli~~e~~~~~-~~v~~~el~RAK~qlkS~LlMNLESR~V-~~EDvGRQVL~~g~rk~p~e~~---~~Ie~lt~~DI~ 425 (472)
T KOG2067|consen 351 AVELIAKEMINMA-GGVTQEELERAKTQLKSMLLMNLESRPV-AFEDVGRQVLTTGERKPPDEFI---KKIEQLTPSDIS 425 (472)
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHhcccccch-hHHHHhHHHHhccCcCCHHHHH---HHHHhcCHHHHH
Confidence 9999999998885 4699999999999999988887775543 556666665433 334444 458899999999
Q ss_pred HHHhhcCcCceEEEEEeC
Q 001753 481 HLLGFFMPENMRIDVVSK 498 (1018)
Q Consensus 481 ~~~~~l~~~~~~i~~~~p 498 (1018)
++++++...+..+.-.|.
T Consensus 426 rva~kvlt~~p~va~~Gd 443 (472)
T KOG2067|consen 426 RVASKVLTGKPSVAAFGD 443 (472)
T ss_pred HHHHHHhcCCceeccCCc
Confidence 999998778877765554
No 12
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=2e-31 Score=306.31 Aligned_cols=404 Identities=14% Similarity=0.075 Sum_probs=316.7
Q ss_pred eEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhHHhhhcCcEEEEEEe
Q 001753 570 TCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN-----EIIYQASVAKLETSVSIF 644 (1018)
Q Consensus 570 ~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~~~~~g~~~~~~~~ 644 (1018)
....+.||++++..+.++ .|.+.+.+.+..+....+....++++++..++..+.. +........|...++..+
T Consensus 18 ~~~~L~nGl~~~~~~~~~--~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~ts 95 (438)
T COG0612 18 QVFTLPNGLRVITYPNPT--APTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFTS 95 (438)
T ss_pred eEEEcCCCCEEEEEeCCC--CCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeecccc
Confidence 456788999999999765 6889999999977778888888999999999876532 345555667888888888
Q ss_pred CceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcC-C--CCCHHHHH
Q 001753 645 SDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-S--FYDVDEKL 721 (1018)
Q Consensus 645 ~~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~-~--~~~~~~~~ 721 (1018)
.+.....++.++++++.+++++++++.+|.|++++|+++|..++++++...++|.+++.+.+...++. + .++..|+.
T Consensus 96 ~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~ 175 (438)
T COG0612 96 FDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTE 175 (438)
T ss_pred chhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCH
Confidence 88888888878899999999999999999999999999999999999999999999999999998875 3 34568899
Q ss_pred HHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEecc-C
Q 001753 722 SILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV-K 800 (1018)
Q Consensus 722 ~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 800 (1018)
+.|+++|.+||++||+++|.|.|++++|+||++.+++..++++.++.|+.. .++...+.. ....+. . +..... .
T Consensus 176 e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~-~~~~~~~~~--~~~~~~-~-~~~~~~~~ 250 (438)
T COG0612 176 ESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGA-APPPKIPPE--PPLGPE-R-VVRVNDPE 250 (438)
T ss_pred HHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCcc-CCCCCCCCc--cccCCC-c-eEEecCCC
Confidence 999999999999999999999999999999999999999999999999862 111111110 011111 1 112111 1
Q ss_pred CCCCcCcEEEEEEEeccccCcc----cHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCC
Q 001753 801 NKCETNSVIELYFQIEQEKGME----LTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSK 876 (1018)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~ 876 (1018)
.+....+.+...+... ... .....+++.++++.++||||+++|+++||+|++++........+.+.+++.+..
T Consensus 251 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~~~~~~~~ 327 (438)
T COG0612 251 QPDLEQAWLALGYPGP---DYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLSDSGLFSIYAGTAP 327 (438)
T ss_pred CchhhhhhhhccccCc---CcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccccccCCceEEEEecC
Confidence 1222222222233221 111 234444555666667899999999999999999986666666566666666666
Q ss_pred CChhHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCC
Q 001753 877 YNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIK 955 (1018)
Q Consensus 877 ~~~~~~~~~i~~~l~~~~~~~-~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT 955 (1018)
.+++.+.+.|.+.+..+...+ ..+|+++++.+|..+.+.+....+++...+..++.....++ +....+++++.|++||
T Consensus 328 ~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~vt 406 (438)
T COG0612 328 ENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGG-SLITLEELLERIEAVT 406 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcC-CccCHHHHHHHHHhcC
Confidence 788888888888888877643 23899999999999999999999999999998877665543 6778899999999999
Q ss_pred HHHHHHHHHHhcccCCCCccEEEEEEecCCCCcc
Q 001753 956 KNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIK 989 (1018)
Q Consensus 956 ~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~~ 989 (1018)
++||++++++++.+. ..+++++|+.....
T Consensus 407 ~~dv~~~a~~~~~~~-----~~~~~~~~p~~~~~ 435 (438)
T COG0612 407 LEDVNAVAKKLLAPE-----NLTIVVLGPEKALK 435 (438)
T ss_pred HHHHHHHHHHhcCCC-----CcEEEEEccccccc
Confidence 999999999999765 58999999866443
No 13
>PRK15101 protease3; Provisional
Probab=99.93 E-value=2.6e-24 Score=272.42 Aligned_cols=395 Identities=10% Similarity=-0.007 Sum_probs=286.9
Q ss_pred cccEEEecCCCEEEEEeCC---CCCCCCCcccccCCCccccccccCccccccccccccccccchhhhhccccccccccce
Q 001753 23 LYRVIELENRLCALLVHDP---EIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKA 99 (1018)
Q Consensus 23 ~~~~~~L~NGl~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (1018)
....+.++||++|++++|+ .. | ++
T Consensus 522 ~p~~i~~~~g~~vw~~~d~~f~~~--------------P---------------------------------------k~ 548 (961)
T PRK15101 522 HPELIVDEPGLRVVYMPSQYFADE--------------P---------------------------------------KA 548 (961)
T ss_pred CCeEEEcCCCeEEEEeCCCccccC--------------C---------------------------------------CE
Confidence 3577899999999999998 45 7 99
Q ss_pred EEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHH
Q 001753 100 AAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFS 179 (1018)
Q Consensus 100 ~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~~~ 179 (1018)
.+.+.+.+|...++....|++.++..|+-. . ..++....+..|..++.. +.+.+.+++++.+++++.+|+++.
T Consensus 549 ~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~-----~-l~e~~y~a~~aG~~~~~~-~~~g~~i~v~g~s~~l~~ll~~l~ 621 (961)
T PRK15101 549 DISLVLRNPKAMDSARNQVLFALNDYLAGL-----A-LDQLSNQASVGGISFSTN-ANNGLMVNANGYTQRLPQLLQALL 621 (961)
T ss_pred EEEEEEeCCCccCCHHHHHHHHHHHHHHHH-----H-HHHHhchHHhcCcEEEEc-cCCCEEEEEEecChhHHHHHHHHH
Confidence 999999999999999999999999998721 1 134444455678888888 689999999999999999999999
Q ss_pred hhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHh-hCCCCCCCCccccCchhccchhhhcCccHHHHHHHHHH
Q 001753 180 QFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCH-TSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYM 258 (1018)
Q Consensus 180 ~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~ 258 (1018)
+.+.+|.|+++.|+++|..+.+|+++...+ ..+.+.+.. ..+.+|||+.. .|..++|.+ ++.++|++||+
T Consensus 622 d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~py~~~-~~~~~~l~~------it~edl~~f~~ 692 (961)
T PRK15101 622 EGYFSFTPTEEQLAQAKSWYREQLDSAEKG--KAYEQAIMPAQMLSQVPYFER-DERRKLLPS------ITLKDVLAYRD 692 (961)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHhhhccc--CcHHHHHHHHHHHhcCCCCCH-HHHHHHHhc------CCHHHHHHHHH
Confidence 999999999999999999999999875432 222222221 34568999864 678999998 99999999999
Q ss_pred hcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceE-EEEEecccccEEEEEEecCCchhhh
Q 001753 259 NYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKL-FRLEAVKDVHILDLTWTLPCLHQEY 337 (1018)
Q Consensus 259 ~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~p~~~~~~ 337 (1018)
++|+|.|++++|+||++.+++.++++++++.++..............+ ..... +...+...+..+.+.|..++..
T Consensus 693 ~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~--- 768 (961)
T PRK15101 693 ALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTEWWRGKDVVVD-KKQSVNFEKAGSSTDSALAAVYVPTGYD--- 768 (961)
T ss_pred HHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcccccccceEeC-CCCeEEEecCCCCCCCeEEEEEEeCCCC---
Confidence 999999999999999999999999999988886532211000000001 11112 1222233345566666444432
Q ss_pred hcCcHHHHHHHhcCCCCCcHHHHHH-hcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHHHHHHHH
Q 001753 338 LKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLL 416 (1018)
Q Consensus 338 ~~~~~~~l~~iLg~~~~~~L~~~Lr-~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l 416 (1018)
..+..++..+||++..++||..|| ++||+|.|+++..... + .+.+.+.+.....+.+.++..++.++..+...
T Consensus 769 -~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~-~----~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~ 842 (961)
T PRK15101 769 -EYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVG-R----QWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAK 842 (961)
T ss_pred -CHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccC-C----eeeEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 246688999999988899999999 8999999998766531 1 22444555443322345566666655554322
Q ss_pred HhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcC--CCCccccccccccccCCCHHHHHHHHhhc--CcCceE
Q 001753 417 RQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLL--IYPAEHVIYGEYMYEVWDEEMIKHLLGFF--MPENMR 492 (1018)
Q Consensus 417 ~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~l~~~~~i~~~t~~~i~~~~~~l--~~~~~~ 492 (1018)
. .++++++++++|+.+...+....+ +..+.+..+...+. .++.+........++++|++||+++++++ .+++..
T Consensus 843 l-~~lt~eE~~~~k~~l~~~~~~~~~-sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~~~~~ 920 (961)
T PRK15101 843 L-RAMKPEEFAQYQQALINQLLQAPQ-TLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEPQGLA 920 (961)
T ss_pred H-HhCCHHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCCCCCE
Confidence 2 489999999999999888876665 45566666655543 33444444556678999999999999883 466654
Q ss_pred E-EEEeC
Q 001753 493 I-DVVSK 498 (1018)
Q Consensus 493 i-~~~~p 498 (1018)
+ +.+.+
T Consensus 921 ~~~~~~~ 927 (961)
T PRK15101 921 ILSQISG 927 (961)
T ss_pred EEEEeec
Confidence 4 34444
No 14
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.93 E-value=7.3e-23 Score=209.47 Aligned_cols=371 Identities=13% Similarity=0.103 Sum_probs=267.1
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHH
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMR 177 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~ 177 (1018)
.+++.+.+++||+++|.+++|++|+++...++-|..|+. ..+.+-++..||.++.++++|+..|.+++++++++-.|.+
T Consensus 43 is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sa-l~ivr~se~~GG~Lss~~tRe~~~~tvt~lrd~~~~~l~~ 121 (429)
T KOG2583|consen 43 ISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSA-LKIVRESEQLGGTLSSTATRELIGLTVTFLRDDLEYYLSL 121 (429)
T ss_pred ceEEEEEEecCccCCccccccHHHHHHHhcccCccccch-hhhhhhhHhhCceeeeeeecceEEEEEEEecccHHHHHHH
Confidence 999999999999999999999999999999999999998 7899999999999999999999999999999999999999
Q ss_pred HHhhccCCCCChhHHHHHH-HHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHH
Q 001753 178 FSQFFISPLMKVEAMEREV-LAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKL 256 (1018)
Q Consensus 178 ~~~~~~~p~~~~~~~~~e~-~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f 256 (1018)
|.+....|.|.+.+++.+. ..+..+.. ..+|..+..+.+++.+|-+ .++...+-..-.+.+ ++.++|++|
T Consensus 122 L~~V~~~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfRn-gLgnslY~p~~~vg~------vss~eL~~F 192 (429)
T KOG2583|consen 122 LGDVLDAPAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFRN-GLGNSLYSPGYQVGS------VSSSELKDF 192 (429)
T ss_pred HHHhhcccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHhc-ccCCcccCCcccccC------ccHHHHHHH
Confidence 9999999999999999988 66666654 4789999999999999865 655554433334555 888999999
Q ss_pred HHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEEEEecccccEEEEEEecCC-c-h
Q 001753 257 YMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPC-L-H 334 (1018)
Q Consensus 257 ~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~p~-~-~ 334 (1018)
-+++|...||+|+-+| +|.+.+..+.++++ .++......+.. ..+..+.. .... ....+.+.+-..+ . .
T Consensus 193 a~k~fv~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~~k~a~----a~~~gGe~-Rk~~--~g~~~~v~vagegAAa~ 263 (429)
T KOG2583|consen 193 AAKHFVKGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLPLKPAP----AKYSGGEA-RKDA--RGNRVHVAVAGEGAAAG 263 (429)
T ss_pred HHHHhhccceEEEecC-CChHHHHHHHHHhc-cccCCCCCCCCC----ccccCCcc-cccc--CCceeEEEEecCccccc
Confidence 9999999999999998 89999999999883 222222111110 11112221 1111 1223333343333 2 2
Q ss_pred hhhhcCcHHHHHHHhcCCCC----CcHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHH
Q 001753 335 QEYLKKSEDYLAHLLGHEGR----GSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVY 410 (1018)
Q Consensus 335 ~~~~~~~~~~l~~iLg~~~~----~~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~ 410 (1018)
+.....+..++.++||...+ .+++..+-..-.-+.+++..... .+++.|+|++++..+. .++.+++....
T Consensus 264 ~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a---~ysDsGL~gv~~~~~~---~~a~~~v~s~v 337 (429)
T KOG2583|consen 264 NLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNA---PYSDSGLFGVYVSAQG---SQAGKVVSSEV 337 (429)
T ss_pred chHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecc---cccCCceEEEEEEecC---ccHHHHHHHHH
Confidence 33445677889999998653 45666554221222222222211 1135679999998776 67889999888
Q ss_pred HHHHHHHhcCCchHHHHHHHHhhccccccccCCCcHHHHHHHHHhcCCCCccccccccccccCCCHHHHHHHHhhcCcCc
Q 001753 411 QYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPEN 490 (1018)
Q Consensus 411 ~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~i~~~t~~~i~~~~~~l~~~~ 490 (1018)
..|+.....+++-.....+.+.+........ .+.........++. .+++.++. .|+++++.||++.++++....
T Consensus 338 ~~lks~~~~~id~~~~~a~~~~l~~~~~ss~--~a~~~~~~~~a~~~-~~~d~~i~---~id~Vt~sdV~~a~kk~~s~k 411 (429)
T KOG2583|consen 338 KKLKSALVSDIDNAKVKAAIKALKASYLSSV--EALELATGSQANLV-SEPDAFIQ---QIDKVTASDVQKAAKKFLSGK 411 (429)
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHhhcch--HHHHHhhHHHhcCC-CChHHHHH---HhccccHHHHHHHHHHhccCc
Confidence 8888888888887776666666555443221 12222222222221 14445554 489999999999999998888
Q ss_pred eEEEEEeCC
Q 001753 491 MRIDVVSKS 499 (1018)
Q Consensus 491 ~~i~~~~p~ 499 (1018)
..+..+|.-
T Consensus 412 ls~aA~Gnl 420 (429)
T KOG2583|consen 412 LSLAAYGNL 420 (429)
T ss_pred ceeeeeccc
Confidence 888888764
No 15
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=99.92 E-value=1.2e-22 Score=236.34 Aligned_cols=330 Identities=11% Similarity=-0.019 Sum_probs=244.3
Q ss_pred eeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH------HHhHHhhhcCcEEEEEEeC
Q 001753 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN------EIIYQASVAKLETSVSIFS 645 (1018)
Q Consensus 572 ~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~~~~~~~~~g~~~~~~~~~ 645 (1018)
+...||++|++.+++. .|.+.+.+.+..+...++....+++.++..|+..+.. ++.......|.+++.+.+.
T Consensus 3 ~tL~NGLrVllv~~p~--~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~ 80 (696)
T TIGR02110 3 ITLPNGLRVHLYHQPD--AKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLE 80 (696)
T ss_pred EEcCCCCEEEEEECCC--CCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcC
Confidence 4578999999999764 5789999999988887888888999999999876543 2334445579999999999
Q ss_pred ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcC-CCCC--HHHHHH
Q 001753 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFYD--VDEKLS 722 (1018)
Q Consensus 646 ~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~-~~~~--~~~~~~ 722 (1018)
+...+.++..+++++.+++++.+++.+|.|++++|+++|++++++++...++|...+.+.+...++. ++|. ..|+.+
T Consensus 81 d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~e 160 (696)
T TIGR02110 81 RTTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRD 160 (696)
T ss_pred CeEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999888999999888888873 3343 567788
Q ss_pred HhccCC---HHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEecc
Q 001753 723 ILHGLS---LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV 799 (1018)
Q Consensus 723 ~l~~it---~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1018)
+|+.++ .+++++||+++|.+.|++++|+||++.++++++++++++.|+....+....+. .........+..
T Consensus 161 sL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~~----p~~~~~~~~~~~-- 234 (696)
T TIGR02110 161 SLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPPA----PLLRFDRLTLAG-- 234 (696)
T ss_pred HHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCCC----CCCCCceeEEEe--
Confidence 888765 99999999999999999999999999999999999999988755332111111 011111122111
Q ss_pred CCCCCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeee-CCeeeEEEEEeC---C
Q 001753 800 KNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVT-YRVFGFCFCIQS---S 875 (1018)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~-~~~~~~~~~vqs---~ 875 (1018)
....+..+.+.+.. .+ ........++..+|++.++|+||.+||+ +||+|+|++++... .+.+.|.+++.. +
T Consensus 235 --~~~~q~~l~~~~p~-~~-~~d~~al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~~g~~lf~I~~~lt~~~ 309 (696)
T TIGR02110 235 --GSEPRLWLLFALAG-LP-ATARDNVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQDAGQALLALEFSARCIS 309 (696)
T ss_pred --cCcceEEEEEeecC-CC-CCChHHHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccCCCCcEEEEEEEEcCCC
Confidence 11223333333322 11 1222234455667777778999999996 89999999966322 233356666654 2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 001753 876 KYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMA 914 (1018)
Q Consensus 876 ~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~ 914 (1018)
..+.+++.+.|.+.+..+.+..-+++.+|+.++|+.=..
T Consensus 310 ~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~ 348 (696)
T TIGR02110 310 AAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQ 348 (696)
T ss_pred ccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhh
Confidence 245667777777777766552127899999999987433
No 16
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=7.6e-22 Score=200.95 Aligned_cols=402 Identities=10% Similarity=0.038 Sum_probs=298.8
Q ss_pred EeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH-----hHHhhhcCcEEEEEEeC
Q 001753 571 CIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEI-----IYQASVAKLETSVSIFS 645 (1018)
Q Consensus 571 ~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~~~~~g~~~~~~~~~ 645 (1018)
...+.||++|---.+ ..+..+|.+-|..+...++.++.+.+.++-.|.-.+.... -.+.+--|+.++...+.
T Consensus 36 vttL~NGlrVaTE~~---~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytSR 112 (467)
T KOG0960|consen 36 VTTLPNGLRVATEHN---SASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTSR 112 (467)
T ss_pred EEEcCCCcEEEeccC---CCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhcccccc
Confidence 445688998876554 3467899999999998899999999998888665433221 12223468888888889
Q ss_pred ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCCHHHHHH
Q 001753 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYDVDEKLS 722 (1018)
Q Consensus 646 ~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~~---~~~~~~~~~ 722 (1018)
+.....+++++++++++++.+.|++++..+.+.+++++|..++++.+....+-....++.+....|.+ ..+..|..+
T Consensus 113 eqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~e 192 (467)
T KOG0960|consen 113 EQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSE 192 (467)
T ss_pred cceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhh
Confidence 99999999999999999999999999999999999999999999999887775567778887777654 456678899
Q ss_pred HhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEeccCCC
Q 001753 723 ILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNK 802 (1018)
Q Consensus 723 ~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1018)
.|++|+.+||++|.+.+|.+.++++...|.++.+++.++++++|+.+++...+.. .+....... .|..+ +. .+.
T Consensus 193 nI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~-~~~~~~~~F-tgsEv--R~--rdd 266 (467)
T KOG0960|consen 193 NIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDK-VPLVPPARF-TGSEV--RV--RDD 266 (467)
T ss_pred hhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcC-CCCCCCccc-cCcee--ee--cCC
Confidence 9999999999999999999999999999999999999999999999765322110 011000001 12222 21 122
Q ss_pred CCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHh-------------chhhhHHhhhccccceEEEeeeeeeCCeeeEE
Q 001753 803 CETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL-------------EEPFFNQLRTKEQLGYVVECSPRVTYRVFGFC 869 (1018)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l-------------~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~ 869 (1018)
.-+.+.+.+..-. ..+..+++.++.+.++++ +|+|-+.+-.. +|+-+..++...+.+++-|.
T Consensus 267 ~lP~a~~AiAVEG----~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFnt~YkDTGLwG 341 (467)
T KOG0960|consen 267 DLPLAHIAIAVEG----VSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFNTSYKDTGLWG 341 (467)
T ss_pred CCchhheeeeEec----CCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhhccccccccee
Confidence 2333333333322 344445555444444443 57888888876 67766666655566666666
Q ss_pred EEEeCCCCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHH
Q 001753 870 FCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAE 949 (1018)
Q Consensus 870 ~~vqs~~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~ 949 (1018)
+|+-+. ++..+...+...+.++.++-..+|+.|.++||+.|..++....++..-.+..+..+++..+... ...+.-+
T Consensus 342 ~y~V~~--~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Grri-~l~El~~ 418 (467)
T KOG0960|consen 342 IYFVTD--NLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGRRI-PLAELEA 418 (467)
T ss_pred EEEEec--ChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCCcC-ChHHHHH
Confidence 665552 4666777777777777776568999999999999999999988888888888888888766333 4467788
Q ss_pred HHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcchhhhc
Q 001753 950 DLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKH 994 (1018)
Q Consensus 950 ~i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~~~~~~~ 994 (1018)
+|.+||.++|++++.+|+- -+.+.+..+|+-....++..+
T Consensus 419 rId~vt~~~Vr~va~k~iy-----d~~iAia~vG~ie~lpdy~~i 458 (467)
T KOG0960|consen 419 RIDAVTAKDVREVASKYIY-----DKDIAIAAVGPIEGLPDYNRI 458 (467)
T ss_pred HHhhccHHHHHHHHHHHhh-----cCCcceeeecccccCchHHHH
Confidence 9999999999999999994 348999999996655555443
No 17
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=1.1e-20 Score=192.72 Aligned_cols=400 Identities=10% Similarity=0.035 Sum_probs=306.4
Q ss_pred eeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHH-----HHHHhHHhhhcCcEEEEEEeCc
Q 001753 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDE-----LNEIIYQASVAKLETSVSIFSD 646 (1018)
Q Consensus 572 ~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~g~~~~~~~~~~ 646 (1018)
..+.||++|--.+ ++. +-..+.+.+.++..++.+.-.+.+.++-.+--.+ ..+.....+..|..++.+.+.+
T Consensus 28 ttL~NGlkvase~--~pg-~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsSRe 104 (472)
T KOG2067|consen 28 TTLPNGLKVASEN--TPG-QFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSSRE 104 (472)
T ss_pred eecCCccEEeccC--CCC-CceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCcccccccHh
Confidence 4678999887654 333 3578999999999888777777777766654332 2245556677888999999999
Q ss_pred eeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC---CCCHHHHHHH
Q 001753 647 KLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS---FYDVDEKLSI 723 (1018)
Q Consensus 647 g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~~---~~~~~~~~~~ 723 (1018)
...-.++.+++.++.++++++|.+.+|.|++.+++.+|..+.-++...-.+|.-+..+.+....+.. ..+.....+.
T Consensus 105 tm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~ 184 (472)
T KOG2067|consen 105 TMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEEN 184 (472)
T ss_pred hhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhh
Confidence 9999999999999999999999999999999999999999988888877789777777777776644 3334445788
Q ss_pred hccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEecc---C
Q 001753 724 LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV---K 800 (1018)
Q Consensus 724 l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 800 (1018)
+..|+.+.|..|.+.+|.|.++++.-+| ++.+++.++++++++.|++...|+...+..+.. .| ......+. .
T Consensus 185 i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~~~aQYt---GG-~~~~~~d~~~~~ 259 (472)
T KOG2067|consen 185 IDKINREVLEEYLKYFYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDESKAQYT---GG-ELKIDTDAPQVT 259 (472)
T ss_pred hhhhhHHHHHHHHHhcCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcccchhhcc---cc-ccccCCCCcccc
Confidence 9999999999999999999999999988 899999999999999998854433221111110 11 00000000 0
Q ss_pred CCCCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHh---------------chhhhHHhhhccccceEEEeeeeeeCCe
Q 001753 801 NKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL---------------EEPFFNQLRTKEQLGYVVECSPRVTYRV 865 (1018)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l---------------~s~lf~~LRek~~L~Y~v~s~~~~~~~~ 865 (1018)
......++ +..+-. .....++.+++.+|+-+| -||||.++=.+.++.|++-|+...+.+.
T Consensus 260 ~g~EltHv-~lg~Eg----~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~Dt 334 (472)
T KOG2067|consen 260 GGPELTHV-VLGFEG----CSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDT 334 (472)
T ss_pred Cccceeee-eEeecc----CCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCC
Confidence 00011222 233333 455556777766666554 3799999999999999999999999888
Q ss_pred eeEEEEEeCCCCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccH
Q 001753 866 FGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQ 945 (1018)
Q Consensus 866 ~~~~~~vqs~~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~ 945 (1018)
+-|.++..+ .|+.+.++++-..+++..+..+++++|+++||.++.+.+..+.++---.+....++++.++ .--.++
T Consensus 335 Glfgi~~s~---~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g-~rk~p~ 410 (472)
T KOG2067|consen 335 GLFGIYASA---PPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTG-ERKPPD 410 (472)
T ss_pred ceeEEeccC---CHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhcc-CcCCHH
Confidence 888777655 4899999999999998887778999999999999999999988887777888888888776 445778
Q ss_pred HHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCCcchhhhc
Q 001753 946 KEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKH 994 (1018)
Q Consensus 946 ~~~~~i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~~~~~~~ 994 (1018)
++++.|+++|++||.+++.+.+. ++.++.-.|+....+....+
T Consensus 411 e~~~~Ie~lt~~DI~rva~kvlt------~~p~va~~Gd~~~lpt~~~i 453 (472)
T KOG2067|consen 411 EFIKKIEQLTPSDISRVASKVLT------GKPSVAAFGDGTGLPTYDHI 453 (472)
T ss_pred HHHHHHHhcCHHHHHHHHHHHhc------CCceeccCCcccCCcchhhh
Confidence 99999999999999999999993 36788888887666555444
No 18
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.88 E-value=1.4e-22 Score=195.80 Aligned_cols=137 Identities=27% Similarity=0.380 Sum_probs=132.0
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHH
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMR 177 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~ 177 (1018)
.+++++++++|+.+||++.+|+||+++||+|+||.+|+. .++.+.++.+|+.++++|+.++|.|++++++++++.+|++
T Consensus 12 ~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~-~~l~~~l~~~G~~~~~~t~~d~t~~~~~~~~~~~~~~l~~ 90 (149)
T PF00675_consen 12 VVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSS-DELQEELESLGASFNASTSRDSTSYSASVLSEDLEKALEL 90 (149)
T ss_dssp EEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBH-HHHHHHHHHTTCEEEEEEESSEEEEEEEEEGGGHHHHHHH
T ss_pred EEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhh-hhhHHHhhhhccccceEecccceEEEEEEecccchhHHHH
Confidence 999999999999999999999999999999999999998 7999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCc
Q 001753 178 FSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGN 235 (1018)
Q Consensus 178 ~~~~~~~p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~ 235 (1018)
+++++.+|.|++++|+++|..+..|++....+|..++.+.+++.+|.+|||+++..|+
T Consensus 91 l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 91 LADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp HHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998875
No 19
>PTZ00432 falcilysin; Provisional
Probab=99.81 E-value=2.1e-17 Score=206.02 Aligned_cols=403 Identities=11% Similarity=0.044 Sum_probs=259.5
Q ss_pred eeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH-----hHHhhhcC--cEEEEEEe
Q 001753 572 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEI-----IYQASVAK--LETSVSIF 644 (1018)
Q Consensus 572 ~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~~~~~g--~~~~~~~~ 644 (1018)
....+|.+|++.+.+....|...+.+.|.++... ..+++.++..++..+...+ .......| ..++...+
T Consensus 95 ~H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~~d----~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~ 170 (1119)
T PTZ00432 95 SHKKTGLQVISLKTNDSSGKEMCFDFYVPTPPHN----DKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTF 170 (1119)
T ss_pred EEcCCCCEEEEEecCCCccceeEEEEEecCCCCC----CcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCC
Confidence 3567899999888654334567777888887532 3577888888876654322 22222344 45677777
Q ss_pred CceeEEEEeecCC-CHHHHHHHHHHHHhcCCCCHHHH--HH---------H--------------------HHHHHHHHH
Q 001753 645 SDKLELKVYGFND-KLPVLLSKILAIAKSFLPSDDRF--KV---------I--------------------KEDVVRTLK 692 (1018)
Q Consensus 645 ~~g~~l~~~g~s~-~l~~~l~~l~~~l~~p~~~~~~f--~~---------~--------------------k~~~~~~~~ 692 (1018)
.+...+.++..++ ++..+++.+++.+.+|.|+++++ .+ . |..+.++++
T Consensus 171 ~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk 250 (1119)
T PTZ00432 171 KDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMK 250 (1119)
T ss_pred CCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHH
Confidence 8999999999886 69999999999999999988753 22 1 677899999
Q ss_pred hcccChhhHHHHHHHHhhcCCCC--CHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhc
Q 001753 693 NTNMKPLSHSSYLRLQVLCQSFY--DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFS 770 (1018)
Q Consensus 693 ~~~~~p~~~a~~~~~~~l~~~~~--~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~ 770 (1018)
...++|..++.+.+.+.++.++| ...|..+.|..+|.+++++||+++|.|.|+.++|+||++.+++.++++++++.++
T Consensus 251 ~~~~~p~~~~~~~~~~~lf~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~ 330 (1119)
T PTZ00432 251 KRFSDPLSFGYSVIYQNLFSNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHP 330 (1119)
T ss_pred HhhCCHHHHHHHHHHHHHhCCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhcc
Confidence 99889999999998877774444 4578999999999999999999999999999999999999999999999997776
Q ss_pred CCCCCcc-ccc--cceeEE---cCCCCeEEEEeccCC-CCCcCcEEEEEEEecccc--------CcccHHHHHHHHHHHH
Q 001753 771 VQPLPIE-MRH--QECVIC---LPSGANLVRNVSVKN-KCETNSVIELYFQIEQEK--------GMELTRLKALIDLFDE 835 (1018)
Q Consensus 771 ~~~~~~~-~~~--~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~ 835 (1018)
....... ..+ ...... ...+...+ ...... +......+...|.++|.. ...+..++.++.+|+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~ 409 (1119)
T PTZ00432 331 KTGQLSHTAYREDADENLLYEEYKDKPKHV-KKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNY 409 (1119)
T ss_pred cccccccccccccccccccccccccCCeEE-EeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHH
Confidence 4311000 000 000000 00111111 211111 222233333335442210 0123456666666666
Q ss_pred Hh----chhhhHHhhhccccceEE-EeeeeeeCCeeeEEEEEeCCC-C-------ChhHHHHHHHHHHHHHHHHHcCCCH
Q 001753 836 IL----EEPFFNQLRTKEQLGYVV-ECSPRVTYRVFGFCFCIQSSK-Y-------NPIYLQERIDNFISGLDELLEGLDD 902 (1018)
Q Consensus 836 ~l----~s~lf~~LRek~~L~Y~v-~s~~~~~~~~~~~~~~vqs~~-~-------~~~~~~~~i~~~l~~~~~~~~~is~ 902 (1018)
+| +|+|++.||+ +||||.+ ++++......+.|.++++... . +.+++.+.|.+.++.+.. +++++
T Consensus 410 lLggg~sS~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~--eGi~~ 486 (1119)
T PTZ00432 410 LLLGTPESVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVT--EGFNK 486 (1119)
T ss_pred HHcCCCccHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHH--hCCCH
Confidence 65 7899999996 7999995 555555556666777765321 1 133555555555555544 68999
Q ss_pred HHHHHHHHHHHHHHcCCCCC--H--HHHHHHHHHHHhcCCCCCCc--cHHHHHHHhc-C--CHHHHHHHHHHhcccCCCC
Q 001753 903 ESFENYRSGLMAKLLEKDPS--L--TYESNRFWNQITDKRYMFDQ--SQKEAEDLKS-I--KKNDVISWYKTYLQQWSPK 973 (1018)
Q Consensus 903 ~el~~ak~~l~~~~~~~~~s--~--~~~~~~~~~~i~~~~~~f~~--~~~~~~~i~~-v--T~edv~~~~~k~l~p~~~~ 973 (1018)
++|+++++.+.-++.+...+ + ...+......+..++-+++. ....++.|+. + +..-+.+..++||-.+
T Consensus 487 eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~N--- 563 (1119)
T PTZ00432 487 SAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLNN--- 563 (1119)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccCC---
Confidence 99999999998888764321 1 12222332333332223331 2233444432 1 2245889999999643
Q ss_pred ccEEEEEEecCC
Q 001753 974 CRRLAVRVWGCN 985 (1018)
Q Consensus 974 ~~~l~v~v~G~~ 985 (1018)
.-.+.+++.|.+
T Consensus 564 ~h~~~v~~~p~~ 575 (1119)
T PTZ00432 564 NHRVTVHLEAVE 575 (1119)
T ss_pred CeeeEEEEecCC
Confidence 235666666776
No 20
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.79 E-value=1.8e-18 Score=174.70 Aligned_cols=178 Identities=20% Similarity=0.232 Sum_probs=140.0
Q ss_pred cHHHHHHHHHHhcCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCC---CCCCCccccccccccceEEEEEe-cccccE
Q 001753 248 NLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGP---QIKPQFTVEGTIWKACKLFRLEA-VKDVHI 323 (1018)
Q Consensus 248 ~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 323 (1018)
++.++|++||++||+|+||+++|+||++.++++++|+++|+.||... ...+......+.......+.... ..+...
T Consensus 2 it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T PF05193_consen 2 ITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQSI 81 (184)
T ss_dssp --HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSEE
T ss_pred CCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999999999999998764 22221111101111223333333 226889
Q ss_pred EEEEEecCCchhhhhcCcHHHHHHHhcCCCCCcHHHHHH-hcCccceecccccCccCCccccceEEEEEEEeChhhhhhH
Q 001753 324 LDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKI 402 (1018)
Q Consensus 324 l~i~~~~p~~~~~~~~~~~~~l~~iLg~~~~~~L~~~Lr-~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 402 (1018)
+.++|+.++.....+..++.++..+|++...++|+..|| ++|++|+++++..... ..+.|.+.+.+++ +++
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~-----~~~~~~i~~~~~~---~~~ 153 (184)
T PF05193_consen 82 VSIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYR-----DSGLFSISFQVTP---ENL 153 (184)
T ss_dssp EEEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEES-----SEEEEEEEEEEEG---GGH
T ss_pred cccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccc-----cceEEEEEEEcCc---ccH
Confidence 999999988744456788999999999988999999999 9999999998854321 3459999999987 689
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHhh
Q 001753 403 FDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 433 (1018)
Q Consensus 403 ~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~ 433 (1018)
+++++.+.++|+.+++.|+++++++++|+.+
T Consensus 154 ~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 154 DEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 9999999999999999999999999999753
No 21
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.65 E-value=3.7e-15 Score=150.37 Aligned_cols=180 Identities=21% Similarity=0.295 Sum_probs=117.0
Q ss_pred cCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCC--CccccccceeEEcCCCCeEEEEeccCCCC
Q 001753 726 GLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPL--PIEMRHQECVICLPSGANLVRNVSVKNKC 803 (1018)
Q Consensus 726 ~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (1018)
++|.++|++||+++|.|.++.++|+||++.+++.++++++++.|+.... +..................+ .. . ..
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~--~~ 76 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIV-IP-S--KD 76 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEE-EE-E--SS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhccccccccccccccccccccccccccc-cc-c--cc
Confidence 4799999999999999999999999999999999999999999986531 00000000000011111111 11 1 11
Q ss_pred CcCcEEEEEEEeccc-cCcccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeeeEEEEEeCCCCChhHH
Q 001753 804 ETNSVIELYFQIEQE-KGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYL 882 (1018)
Q Consensus 804 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~~~~~vqs~~~~~~~~ 882 (1018)
..+..+.+++..++. .........++..+|+..++++||.+||+++|++|+++++.....+.+.+.+++++. ++.+
T Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~~---~~~~ 153 (184)
T PF05193_consen 77 ESQSIVSIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQVT---PENL 153 (184)
T ss_dssp SSSEEEEEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEEE---GGGH
T ss_pred ccccccccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccccceEEEEEEEcC---cccH
Confidence 135555556655311 122334444555555555667899999999999999999987777777777777665 3355
Q ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHH
Q 001753 883 QERIDNFISGLDELL-EGLDDESFENYRSGL 912 (1018)
Q Consensus 883 ~~~i~~~l~~~~~~~-~~is~~el~~ak~~l 912 (1018)
.++++.+++.+..+. .+||++||+++|+.|
T Consensus 154 ~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 154 DEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 556666666665554 469999999999875
No 22
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.39 E-value=2.4e-10 Score=133.02 Aligned_cols=389 Identities=15% Similarity=0.066 Sum_probs=239.5
Q ss_pred cCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCH-----HHHHH--------HHHHHHHHHHHHHHHhHHhhhcCcEEEE
Q 001753 575 EPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNV-----KNCIL--------TELFIHLLKDELNEIIYQASVAKLETSV 641 (1018)
Q Consensus 575 ~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~-----~~~~~--------~~l~~~~l~~~~~~~~~~~~~~g~~~~~ 641 (1018)
..|.++.+...+ .|....+|.|.++....+. ++.++ .+.|..+++.+++-+.-+.. +-
T Consensus 28 ~TGa~l~hi~~~---d~~~vFsi~F~T~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T--~~---- 98 (978)
T COG1026 28 KTGAELAHIKNE---DPNNVFSIAFKTEPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFT--FP---- 98 (978)
T ss_pred cCCceEEEecCC---CcCceEEEEeecCCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhcc--CC----
Confidence 478888777654 3678888998877653332 22221 12244555555553221111 11
Q ss_pred EEeCceeEEEEee-cCCCHHHHHHHHHHHHhcCCCCHHHHHHH--------------HHHHHHHHHhcccChhhHHHHHH
Q 001753 642 SIFSDKLELKVYG-FNDKLPVLLSKILAIAKSFLPSDDRFKVI--------------KEDVVRTLKNTNMKPLSHSSYLR 706 (1018)
Q Consensus 642 ~~~~~g~~l~~~g-~s~~l~~~l~~l~~~l~~p~~~~~~f~~~--------------k~~~~~~~~~~~~~p~~~a~~~~ 706 (1018)
+....-++. -.+++-.++...+|.+++|...++.|.++ +..+-.+++....+|..+..+.+
T Consensus 99 ----D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~ 174 (978)
T COG1026 99 ----DKTVYPASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAM 174 (978)
T ss_pred ----CcceeeccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHH
Confidence 111112222 23678899999999999999888888655 34456688888888999999999
Q ss_pred HHhhcCC---CCCHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHH-HhhhcCCCCCccccccc
Q 001753 707 LQVLCQS---FYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIF-KSIFSVQPLPIEMRHQE 782 (1018)
Q Consensus 707 ~~~l~~~---~~~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 782 (1018)
.+.+++. ++...|....|..+|.|++++||+++|.|.|+.++++||++.++..+.++.. +..+.... .....+..
T Consensus 175 ~~slfp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~-~~~~i~~~ 253 (978)
T COG1026 175 QQSLFPGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRE-LDVPIPDQ 253 (978)
T ss_pred HHhhCCCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccc-cCCCCCcc
Confidence 9999865 2334567788999999999999999999999999999999999998877655 44333322 11111111
Q ss_pred eeEEcCCCCeEEEEeccCCCCCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHh----chhhhHHhhhccccc-eEEEe
Q 001753 783 CVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL----EEPFFNQLRTKEQLG-YVVEC 857 (1018)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l----~s~lf~~LRek~~L~-Y~v~s 857 (1018)
..+.-+......+.+........+..+.+.|-.+ ...+..+..++.+|..++ .++|.+.|-+. |+| +.+..
T Consensus 254 ~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~---~~~d~~~~lal~vL~~iLl~~~asPl~~~lies-glg~~~~~g 329 (978)
T COG1026 254 KAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGG---SASDAEDSLALEVLEEILLDSAASPLTQALIES-GLGFADVSG 329 (978)
T ss_pred cccCcccccceeeccCCCCCCCceeEEEEEEecC---CcccHHHHHHHHHHHHHHccCcccHHHHHHHHc-CCCcccccc
Confidence 1111111111111222122223344444556454 556778888889998886 46899999875 788 44444
Q ss_pred eeeeeCCeeeEEEEEeCC-CCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHH--HHHHHH
Q 001753 858 SPRVTYRVFGFCFCIQSS-KYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESN--RFWNQI 934 (1018)
Q Consensus 858 ~~~~~~~~~~~~~~vqs~-~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~--~~~~~i 934 (1018)
.+........|.+.+++- ....+.+.+.+-+.++++.. .+++.+.++.++.++-=++.+....+.+.+- +....+
T Consensus 330 ~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~--~gi~~~~ie~~~~q~E~s~ke~~s~pfgl~l~~~~~~gw 407 (978)
T COG1026 330 SYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVK--NGIDKKLIEAILHQLEFSLKEVKSYPFGLGLMFRSLYGW 407 (978)
T ss_pred eeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHhhhhhcCCCccHHHHHHhcccc
Confidence 354444445565666552 12345555555555555543 6899999999999888777764444444432 222333
Q ss_pred hcCCCCCCcc--HHHHHHHhc-CCHHH-HHHHHHHhcccCCCCccEEEEEEecCCC
Q 001753 935 TDKRYMFDQS--QKEAEDLKS-IKKND-VISWYKTYLQQWSPKCRRLAVRVWGCNT 986 (1018)
Q Consensus 935 ~~~~~~f~~~--~~~~~~i~~-vT~ed-v~~~~~k~l~p~~~~~~~l~v~v~G~~~ 986 (1018)
..+.-+++.. ...++.|+. +.... +.+..++||-.+ ...+.|.+.++..
T Consensus 408 ~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N---~h~~~v~~~Ps~~ 460 (978)
T COG1026 408 LNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDN---PHYVTVIVLPSPE 460 (978)
T ss_pred ccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcC---CccEEEEEecChH
Confidence 3444344432 244555544 44444 899999999543 2256666666654
No 23
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=3.5e-09 Score=123.07 Aligned_cols=400 Identities=11% Similarity=0.009 Sum_probs=251.2
Q ss_pred eEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH------HhHHhhhcCcEEEEEE
Q 001753 570 TCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE------IIYQASVAKLETSVSI 643 (1018)
Q Consensus 570 ~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~------~~~~~~~~g~~~~~~~ 643 (1018)
..+.+.||+++.+..|+. .++....+.+..+...++.+..+++.++-.|+--+..+ +..-...-|.+.+...
T Consensus 25 ~~I~LpNGl~~LlisDP~--a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T 102 (937)
T COG1025 25 RAIKLPNGLRALLVSDPQ--ADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNAST 102 (937)
T ss_pred eEEECCCCceEEEecCCC--CCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCcccccc
Confidence 457889999999999874 67888888888888878888899999888887643322 2333445677778887
Q ss_pred eCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcC-CCCCH--HHH
Q 001753 644 FSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFYDV--DEK 720 (1018)
Q Consensus 644 ~~~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~-~~~~~--~~~ 720 (1018)
..+...+-+..-.+.|+.+++.+++++.+|.|+++..++++..+-.++.....+-.+...+....++.+ |+++. .|.
T Consensus 103 ~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN 182 (937)
T COG1025 103 AGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGN 182 (937)
T ss_pred CCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCC
Confidence 788888888888999999999999999999999999999999999999888776333433444444443 22222 344
Q ss_pred HHHhcc----CCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEE
Q 001753 721 LSILHG----LSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRN 796 (1018)
Q Consensus 721 ~~~l~~----it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1018)
+++|.. -..+++++||+++|++.+|.++|.|+=+.+++.++..++|+.++......+..+.+.......++...
T Consensus 183 ~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~~t~~ii~-- 260 (937)
T COG1025 183 LETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTGKIIH-- 260 (937)
T ss_pred hhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChHHhCceEE--
Confidence 555544 55789999999999999999999999999999999999999988764332222222111111122111
Q ss_pred eccCCCCCcCcEEEEEEEeccccCcc-cHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeeeeCCeee-EEEEE--
Q 001753 797 VSVKNKCETNSVIELYFQIEQEKGME-LTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFG-FCFCI-- 872 (1018)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~~~~~~~-~~~~v-- 872 (1018)
.+|......+.+++.+....... ..+..+...||+.=-..-|-.-|. ++||+=.+.++.....+..+ |.+.+
T Consensus 261 ---i~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk-~~Glit~l~a~~~~~~~n~~~f~is~~L 336 (937)
T COG1025 261 ---IVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLK-KQGLITELSAGLDPISGNYGVFAISYEL 336 (937)
T ss_pred ---eccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHH-hccchhhhccccccccCCcceEEEEeeh
Confidence 12222334444555552110111 223445555555433334545555 56899899988887664333 55543
Q ss_pred -eCCCCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHhcCCCCCCccHHHHHH
Q 001753 873 -QSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDP-SLTYESNRFWNQITDKRYMFDQSQKEAED 950 (1018)
Q Consensus 873 -qs~~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~-s~~~~~~~~~~~i~~~~~~f~~~~~~~~~ 950 (1018)
..+-.+.+++...+-++++-+.. .++....|+....-+--.+..... .+.....++...+ ..++.+..-...-.
T Consensus 337 T~~Gl~~~~~VI~~~F~yl~~l~~--~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m--~~~p~~~~~~~~~~ 412 (937)
T COG1025 337 TDKGLAHYDRVIALTFQYLNLLRE--KGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNM--EREPVEHTLYASLV 412 (937)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHh--ccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhc--ccCChhhhhchhhc
Confidence 33445556665555566555544 456666666554433333332211 2223333332222 22233322222233
Q ss_pred HhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCCC
Q 001753 951 LKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTN 987 (1018)
Q Consensus 951 i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~ 987 (1018)
+..-..++++.+..-.. |+ .+.+...++...
T Consensus 413 ~~~yd~~~~~~~l~~~~-pe-----n~R~~lis~~~~ 443 (937)
T COG1025 413 LPRYDPKAIQERLALMT-PE-----NARLWLISKLEE 443 (937)
T ss_pred ccccCHHHHHHHHHhhC-cc-----ceEEEEecCCCC
Confidence 45566788999888765 65 566666655443
No 24
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.17 E-value=8.7e-08 Score=99.82 Aligned_cols=379 Identities=11% Similarity=0.047 Sum_probs=239.7
Q ss_pred eccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhHHhhhcCcEEEEEEeCce
Q 001753 573 IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN-----EIIYQASVAKLETSVSIFSDK 647 (1018)
Q Consensus 573 ~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~~~~~g~~~~~~~~~~g 647 (1018)
.+.+|+.|--...+ .|...+.+.|+.+..+.+..+.++++++-........ .+....+..|..++.....+.
T Consensus 27 kl~ngL~Vas~e~~---~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tRe~ 103 (429)
T KOG2583|consen 27 KLVNGLTVASREAP---TAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATREL 103 (429)
T ss_pred ccccceEEEeccCC---CcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeecce
Confidence 34578887766543 4789999999999988888777777665443222211 244556778999999999999
Q ss_pred eEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHhcccChhhHHHHHHHHhhcCCCCCHHH--HHHHh
Q 001753 648 LELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIK-EDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDE--KLSIL 724 (1018)
Q Consensus 648 ~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k-~~~~~~~~~~~~~p~~~a~~~~~~~l~~~~~~~~~--~~~~l 724 (1018)
+.++++.+.++++-.+.++.+++.+|.|.+=+++... ..+...+ ...+|+..+++.+.+..|.+..+..- ---.+
T Consensus 104 ~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l--~~~t~~~~a~e~lH~aAfRngLgnslY~p~~~v 181 (429)
T KOG2583|consen 104 IGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADL--AYQTPYTIAIEQLHAAAFRNGLGNSLYSPGYQV 181 (429)
T ss_pred EEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHh--hhcChHHHHHHHHHHHHHhcccCCcccCCcccc
Confidence 9999999999999999999999999999987776665 3343333 23459999999998887765332111 11247
Q ss_pred ccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEEEeccCCCCC
Q 001753 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCE 804 (1018)
Q Consensus 725 ~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1018)
.+++.++|..|.++.|...|+.++-+ |++.+.+....+++.......+.. +.+ .....|.. +.. ..+.
T Consensus 182 g~vss~eL~~Fa~k~fv~gn~~lvg~-nvd~~~L~~~~~~~~~~~~~~~~k----~a~--a~~~gGe~---Rk~--~~g~ 249 (429)
T KOG2583|consen 182 GSVSSSELKDFAAKHFVKGNAVLVGV-NVDHDDLKQFADEYAPIRDGLPLK----PAP--AKYSGGEA---RKD--ARGN 249 (429)
T ss_pred cCccHHHHHHHHHHHhhccceEEEec-CCChHHHHHHHHHhccccCCCCCC----CCC--ccccCCcc---ccc--cCCc
Confidence 89999999999999999999887655 477788887777662221111110 000 01111211 111 1122
Q ss_pred cCcEEEEEEEeccccCcccHHHHHHHHHHHHHhc--------hhhhHHhhhccc-cceEEEeeeeeeCCeeeEEEEEeCC
Q 001753 805 TNSVIELYFQIEQEKGMELTRLKALIDLFDEILE--------EPFFNQLRTKEQ-LGYVVECSPRVTYRVFGFCFCIQSS 875 (1018)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~--------s~lf~~LRek~~-L~Y~v~s~~~~~~~~~~~~~~vqs~ 875 (1018)
..++.+..-.. ...+.+......++.+.+. .-++.++--.-+ -+-++.+....+.+.+-+.+++...
T Consensus 250 ~~~v~vagegA----Aa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a~ysDsGL~gv~~~~~ 325 (429)
T KOG2583|consen 250 RVHVAVAGEGA----AAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNAPYSDSGLFGVYVSAQ 325 (429)
T ss_pred eeEEEEecCcc----cccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecccccCCceEEEEEEec
Confidence 22222221111 2233455555555555442 123334432211 2445556666666665565555433
Q ss_pred CCChhHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcC
Q 001753 876 KYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSI 954 (1018)
Q Consensus 876 ~~~~~~~~~~i~~~l~~~~~~~-~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~v 954 (1018)
..++.+.+......+...+ .+++-..-+.+++.+...+......+......... . ....+.+++.|++|
T Consensus 326 ---~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~~~~~~~~a~-~------~~~~d~~i~~id~V 395 (429)
T KOG2583|consen 326 ---GSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEALELATGSQAN-L------VSEPDAFIQQIDKV 395 (429)
T ss_pred ---CccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHHHHHhhHHHhc-C------CCChHHHHHHhccc
Confidence 1234455555655555443 57887777788888888877665554443333211 1 11567899999999
Q ss_pred CHHHHHHHHHHhcccCCCCccEEEEEEecCCCCc
Q 001753 955 KKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNI 988 (1018)
Q Consensus 955 T~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~~~ 988 (1018)
|..||++++++++. .++++.-+|+-+..
T Consensus 396 t~sdV~~a~kk~~s------~kls~aA~Gnl~~v 423 (429)
T KOG2583|consen 396 TASDVQKAAKKFLS------GKLSLAAYGNLSNV 423 (429)
T ss_pred cHHHHHHHHHHhcc------CcceeeeeccccCC
Confidence 99999999999883 38999999986543
No 25
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=5.9e-08 Score=106.97 Aligned_cols=388 Identities=13% Similarity=0.065 Sum_probs=232.8
Q ss_pred eccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCH-----HHHH--------HHHHHHHHHHHHHHHHhHHhhhcCcEE
Q 001753 573 IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNV-----KNCI--------LTELFIHLLKDELNEIIYQASVAKLET 639 (1018)
Q Consensus 573 ~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~-----~~~~--------~~~l~~~~l~~~~~~~~~~~~~~g~~~ 639 (1018)
....|.++.+.-... ++....+.|++|....+. ++.+ ...=|..||+.++.-+.-+-.
T Consensus 58 H~~Tgae~lhl~reD---~N~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT------ 128 (998)
T KOG2019|consen 58 HKKTGAEVLHLDRED---ENNVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFT------ 128 (998)
T ss_pred ecCCCceeEeeccCC---CCceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhcc------
Confidence 456688886654332 466788888887653221 1111 112255666666543321111
Q ss_pred EEEEeCceeEEEEee-cCCCHHHHHHHHHHHHhcCCCCHHHHHHH------------------HHHHHHHHHhcccChhh
Q 001753 640 SVSIFSDKLELKVYG-FNDKLPVLLSKILAIAKSFLPSDDRFKVI------------------KEDVVRTLKNTNMKPLS 700 (1018)
Q Consensus 640 ~~~~~~~g~~l~~~g-~s~~l~~~l~~l~~~l~~p~~~~~~f~~~------------------k~~~~~~~~~~~~~p~~ 700 (1018)
..+....=++. -+.++..+.+..+|..+.|..-+..|.++ |..+-++++....+|.+
T Consensus 129 ----~pD~T~yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~ 204 (998)
T KOG2019|consen 129 ----APDYTFYPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDY 204 (998)
T ss_pred ----CCCcceeecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhH
Confidence 11111111222 23678888999999888886555555543 55666778888888888
Q ss_pred HHHHHHHHhhcCC-CCCH--HHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCcc
Q 001753 701 HSSYLRLQVLCQS-FYDV--DEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIE 777 (1018)
Q Consensus 701 ~a~~~~~~~l~~~-~~~~--~~~~~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~ 777 (1018)
+....+.+.+++. .|++ .|..-.|..++++++++||+++|.|.|+.++-+||+..++...+++.-+..+.... .+
T Consensus 205 if~~~~Qq~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~--~s 282 (998)
T KOG2019|consen 205 IFGMLFQQALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRE--LS 282 (998)
T ss_pred HHHHHHHHhhCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhccccccc--cc
Confidence 8888888888754 4443 45667789999999999999999999999999999999988887764443333221 11
Q ss_pred ccccceeEEcCCCCeEEEEeccCCC---CCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHh----chhhhHHhhhccc
Q 001753 778 MRHQECVICLPSGANLVRNVSVKNK---CETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL----EEPFFNQLRTKEQ 850 (1018)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l----~s~lf~~LRek~~ 850 (1018)
..... .....+....+ ......+ -..+....+.+-.+ .+.+..+..++.+|+.++ +|+|++.|=|. |
T Consensus 283 ~kv~~-qk~f~kp~rvv-e~~p~d~~~~p~Kq~~~s~s~L~~---~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiES-G 356 (998)
T KOG2019|consen 283 SKVTF-QKLFDKPRRVV-EKGPADPGDLPKKQTKCSNSFLSN---DPLDTYETFALKVLSHLLLDGPSSPFYKALIES-G 356 (998)
T ss_pred Ccccc-ccccccCceee-eecCCCCCCCccceeEEEEEeecC---CchhHHHHHHHHHHHHHhcCCCccHHHHHHHHc-C
Confidence 11000 01111122221 1111111 12233333444343 445566777888888875 68999999885 7
Q ss_pred cc--eEEEeeeeeeCCeeeEEEEEeCC-CCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHH-H
Q 001753 851 LG--YVVECSPRVTYRVFGFCFCIQSS-KYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTY-E 926 (1018)
Q Consensus 851 L~--Y~v~s~~~~~~~~~~~~~~vqs~-~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~-~ 926 (1018)
|| .+|.+++........|.+.+|.- ..+.+.+++.|...++++.+ +++..+-++.....+-=++.......+- .
T Consensus 357 LGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae--~gfd~drieAil~qiEislk~qst~fGL~L 434 (998)
T KOG2019|consen 357 LGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAE--TGFDNDRIEAILHQIEISLKHQSTGFGLSL 434 (998)
T ss_pred CCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHhhhhhhccccchhHHH
Confidence 77 77888887766666677777663 24667777777766666654 6788888887777776666654333221 1
Q ss_pred HHHHHHHHhcCCCCCCccH------HHHHHHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecCCC
Q 001753 927 SNRFWNQITDKRYMFDQSQ------KEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNT 986 (1018)
Q Consensus 927 ~~~~~~~i~~~~~~f~~~~------~~~~~i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~~~ 986 (1018)
+......+.++.-+|++.. ...+.|..-...=++...++|+.. +...+++.+.++..
T Consensus 435 ~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYiln---n~h~~t~smqpd~e 497 (998)
T KOG2019|consen 435 MQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILN---NPHCFTFSMQPDPE 497 (998)
T ss_pred HHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhc---CCceEEEEecCCch
Confidence 2222233333333565432 223333333455588889999964 34578888887754
No 26
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=1.2e-07 Score=112.88 Aligned_cols=397 Identities=11% Similarity=-0.021 Sum_probs=232.3
Q ss_pred eEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH------HhHHhhhcCcEEEEEE
Q 001753 570 TCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE------IIYQASVAKLETSVSI 643 (1018)
Q Consensus 570 ~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~------~~~~~~~~g~~~~~~~ 643 (1018)
..+.+.||+++.+..|+... +....+.+.-+...++....+++.+.-.|+--+..+ +.......|.+.+...
T Consensus 29 r~~~L~Ngl~alLisDp~tD--~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T 106 (974)
T KOG0959|consen 29 RGIELTNGLRALLISDPKTD--KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYT 106 (974)
T ss_pred eEEEecCCceEEEecCCCCC--ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCcccccc
Confidence 45778999999999987543 455666666666777788889999888887754432 2222333566666666
Q ss_pred eCceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC-CCCH--HHH
Q 001753 644 FSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS-FYDV--DEK 720 (1018)
Q Consensus 644 ~~~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~~-~~~~--~~~ 720 (1018)
..+.....+..-.++|+.+|+.+++++.+|.|.+++.++++..+..+.++...+-.+...+..+.+..+. +++. .|.
T Consensus 107 ~~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN 186 (974)
T KOG0959|consen 107 DSEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGN 186 (974)
T ss_pred ccccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccc
Confidence 6667777777777899999999999999999999999999999999999887764444444444444332 2222 355
Q ss_pred HHHhccCC-----HHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCccccccceeEEcCCCCeEEE
Q 001753 721 LSILHGLS-----LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVR 795 (1018)
Q Consensus 721 ~~~l~~it-----~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1018)
.++|...- .+.|.+||+++|..++|.++|+|.-+.+....++...|+..++...+.+..+..+ ..+..-...+
T Consensus 187 ~~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~p--~~~e~~~~~~ 264 (974)
T KOG0959|consen 187 KKTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEPP--FLPEELKKLV 264 (974)
T ss_pred hhhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCCC--CChHHhCcEE
Confidence 66666665 8999999999999999999999999999988898888887776543322222210 1111111112
Q ss_pred EeccCCCCCcCcEEEEEEEeccccCc-ccHHHHHHHHHHHHHhchhhhHHhhhccccceEEEeeeee-eCCeeeEEEEEe
Q 001753 796 NVSVKNKCETNSVIELYFQIEQEKGM-ELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRV-TYRVFGFCFCIQ 873 (1018)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~s~lf~~LRek~~L~Y~v~s~~~~-~~~~~~~~~~vq 873 (1018)
++... .....+.+.+.+++.... ...+......|+++-=.+-|...||. +|++=+..++... ..+.+.+.+.+.
T Consensus 265 ~v~pi---k~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~-~gw~~sl~a~~~~~as~~~~f~v~id 340 (974)
T KOG0959|consen 265 RVVPI---KDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKR-LGWATSLEAGIPEFASGYSFFNVSID 340 (974)
T ss_pred EEEec---cccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHH-hhchheeecCCCccccccceEEEEEE
Confidence 22121 112223333445321111 23355566666666555678889996 4666666666653 334444544443
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH-cCCC---HHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHH
Q 001753 874 SSKYNPIYLQERIDNFISGLDELL-EGLD---DESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAE 949 (1018)
Q Consensus 874 s~~~~~~~~~~~i~~~l~~~~~~~-~~is---~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~ 949 (1018)
-+..--+.+.+.|....+.+..+. .+.- -+|+......... +..+. .+.+.+..+...+. .|+....-....
T Consensus 341 Ltd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Fr-f~~k~-~p~~~~~~~~~nlq--~~P~~~il~~~~ 416 (974)
T KOG0959|consen 341 LTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFR-FQDKE-PPMEYASEIASNLQ--YYPVEDVLTGSY 416 (974)
T ss_pred eccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhhee-ecccC-CcHHHHHHHHhhcc--cCChHHhhcchh
Confidence 322333344444444444433221 2332 2333333222211 22222 33333333322221 233332222233
Q ss_pred HHhcCCHHHHHHHHHHhcccCCCCccEEEEEEecC
Q 001753 950 DLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGC 984 (1018)
Q Consensus 950 ~i~~vT~edv~~~~~k~l~p~~~~~~~l~v~v~G~ 984 (1018)
.+.....+-|+.+.. .+.|. .+.|.+++.
T Consensus 417 ll~~~~p~~i~~~~~-~L~p~-----n~~v~~~s~ 445 (974)
T KOG0959|consen 417 LLTEFDPDLIQEVLS-SLVPS-----NMRVILVSR 445 (974)
T ss_pred hhhhcChHHHHHHHH-hcCcc-----cceeeeeee
Confidence 445555666666554 46565 455555544
No 27
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=98.67 E-value=1.7e-07 Score=90.46 Aligned_cols=133 Identities=12% Similarity=0.084 Sum_probs=113.0
Q ss_pred EEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHH-----HHHhHHhhhcCcEEEEEEeCceeEEEEe
Q 001753 579 RFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDEL-----NEIIYQASVAKLETSVSIFSDKLELKVY 653 (1018)
Q Consensus 579 ~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~g~~~~~~~~~~g~~l~~~ 653 (1018)
+|++.+++ ..|.+.+.+.|..+...+++...+++.|+..++.... .++.......|.+++...+.+.+.+.++
T Consensus 1 ~V~~~~~~--~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~ 78 (149)
T PF00675_consen 1 KVVLVEDP--GSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSAS 78 (149)
T ss_dssp EEEEEEST--TSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEE
T ss_pred CEEEEEcC--CCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEE
Confidence 46666654 3578999999988888888888899998888776542 2334445568999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcccChhhHHHHHHHHhhcCC
Q 001753 654 GFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS 713 (1018)
Q Consensus 654 g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~p~~~a~~~~~~~l~~~ 713 (1018)
+++++++.+++++.+++.+|.|++++|+++|+.++.+++....+|..++.+.+.+.++.+
T Consensus 79 ~~~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~ 138 (149)
T PF00675_consen 79 VLSEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRG 138 (149)
T ss_dssp EEGGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred EecccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999998889889999999888753
No 28
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=98.57 E-value=2.6e-05 Score=86.59 Aligned_cols=310 Identities=12% Similarity=0.113 Sum_probs=181.7
Q ss_pred ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCHHHHHHHH----------HHHHHHHHhcccChhhHHHHHHHHhhcCC--
Q 001753 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIK----------EDVVRTLKNTNMKPLSHSSYLRLQVLCQS-- 713 (1018)
Q Consensus 646 ~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~~~f~~~k----------~~~~~~~~~~~~~p~~~a~~~~~~~l~~~-- 713 (1018)
....++..| .+.+-.+|..+++-+.+|.++.++|-.+. ..+-.++++..........+..+.++++.
T Consensus 99 T~YtLStag-~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~s 177 (1022)
T KOG0961|consen 99 TAYTLSTAG-SDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFS 177 (1022)
T ss_pred ceEEeeccc-ccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCC
Confidence 345555555 46788999999999999999999987663 34445565555555556666677777754
Q ss_pred CC--CHHHHHHHhccCCHHHHHHHHHHHHhhhceEEEEecCCCHHHHHHHHHHHHhhhcCCCCCc-ccccc-c----eeE
Q 001753 714 FY--DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPI-EMRHQ-E----CVI 785 (1018)
Q Consensus 714 ~~--~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~~~~~~~~~-~~~~~-~----~~~ 785 (1018)
+| ...|....|..+|.+.+++||+++|.+.|+-+.|.|+++.+++....+.+-+.+...+... ...+. . -..
T Consensus 178 gY~~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~ 257 (1022)
T KOG0961|consen 178 GYAVETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALS 257 (1022)
T ss_pred CceeccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcc
Confidence 22 2346778888999999999999999999999999999999999987777666544432111 00111 0 011
Q ss_pred EcCCCCeEEEEeccCCCCCcCcEEEEEEEeccccCcccHHHHHHHHHHHHHhc----hhhhHHhhh-ccccceEEEeeee
Q 001753 786 CLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILE----EPFFNQLRT-KEQLGYVVECSPR 860 (1018)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~----s~lf~~LRe-k~~L~Y~v~s~~~ 860 (1018)
.++..+.. .++.+.....+..+.+.| .|+ ++.+.....++.+|-.+++ ++|-+++-+ +.-++-+|++...
T Consensus 258 ~i~e~t~~--tVefp~~Des~G~v~~aW-~g~--s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~ 332 (1022)
T KOG0961|consen 258 DIKESTVH--TVEFPTDDESRGAVEVAW-FGH--SPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIA 332 (1022)
T ss_pred cCCcccee--eeecCCcccccceEEEEE-cCC--CHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeee
Confidence 12222222 333444444566666666 332 3445566667777776665 355555444 4456666655544
Q ss_pred e-eCCeeeEEEEEeCCCCChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCC
Q 001753 861 V-TYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRY 939 (1018)
Q Consensus 861 ~-~~~~~~~~~~vqs~~~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~ 939 (1018)
. .++. +.+.+++ ...+++...-..+++.+.+. ..|+=+-+......-+-++..+.+.. +...++.++.+++
T Consensus 333 ~~vrc~--i~L~f~g--VP~EKi~~~~~k~l~~l~et-~~iDm~Rm~~~i~~t~~~yL~nlE~n---~~s~fms~ii~d~ 404 (1022)
T KOG0961|consen 333 EGVRCD--IRLNFAG--VPVEKIDECAPKFLDKLVET-ANIDMERMGYLIDQTILNYLVNLETN---APSDFMSHIIGDQ 404 (1022)
T ss_pred ccccee--EEEeecC--CcHHHhhhhhHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHhhhcC---ChHHHHHHHhhhh
Confidence 3 2222 2233344 56777777777777766432 24544444444333333333222221 1111122211111
Q ss_pred CCCcc-----------HHHHHHHhcCCHHHHHHHHHHhccc
Q 001753 940 MFDQS-----------QKEAEDLKSIKKNDVISWYKTYLQQ 969 (1018)
Q Consensus 940 ~f~~~-----------~~~~~~i~~vT~edv~~~~~k~l~p 969 (1018)
-++.. -.+.+.|+.....|-+...+|||-.
T Consensus 405 ~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fve 445 (1022)
T KOG0961|consen 405 LYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVE 445 (1022)
T ss_pred hccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhcc
Confidence 11111 1455667778889999999999953
No 29
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=97.83 E-value=0.00031 Score=75.28 Aligned_cols=180 Identities=16% Similarity=0.216 Sum_probs=106.6
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEe-ChhhHHHHHHHHHhhccC
Q 001753 106 GMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEI-KREFLKGALMRFSQFFIS 184 (1018)
Q Consensus 106 ~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~-~~~~l~~~L~~~~~~~~~ 184 (1018)
+.|.-.|-.+..|+||+|||.+-. +.. .++ -.||+|++.+..|.... ..+....++.-+..+|+.
T Consensus 26 ~FGFe~DI~~iLGiAHLLEHILIs----FD~----~~F------~ANASTaRsYMSFWC~si~g~~~~DAvrtliSWFF~ 91 (590)
T PF03410_consen 26 NFGFENDIGEILGIAHLLEHILIS----FDS----SKF------LANASTARSYMSFWCKSIRGRTYIDAVRTLISWFFD 91 (590)
T ss_pred ccccccchHHHHhHHHHHHHHeee----cch----HHh------hcccchhhhhhhhhhhhccCCChhHHHHHHHHHhhc
Confidence 677777778899999999999862 222 222 35899999999998864 334445555555555543
Q ss_pred -----CCCChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHHHHh
Q 001753 185 -----PLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMN 259 (1018)
Q Consensus 185 -----p~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~ 259 (1018)
-.|+...++.-+..+.+|+--+ +.-...++.+.-+. +|.-|. +|...-|.+- . ...+-|.+-.++
T Consensus 92 ~g~Lk~~F~~~~i~~hikELENEYYFR--nEvfHCmDvLtfL~-gGDLYN---GGRi~ML~~l-~---~i~~mL~~RM~~ 161 (590)
T PF03410_consen 92 NGKLKDNFSRSKIKNHIKELENEYYFR--NEVFHCMDVLTFLG-GGDLYN---GGRIDMLNNL-N---DIRNMLSNRMHR 161 (590)
T ss_pred CCcccccccHhHHHHHHHHHhhhhhhh--hhHHHHHHHHHHhc-CCcccC---CchHHHHhhh-H---HHHHHHHHHHHh
Confidence 2477777777777777777532 34445566665433 455653 2333333320 0 122333333333
Q ss_pred cCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEEE
Q 001753 260 YYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRL 315 (1018)
Q Consensus 260 ~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1018)
....|.++.|-- ++ +.+..++++.||.+|..+...+.. ......++++..
T Consensus 162 -I~GpniVIFVk~-l~-~~~l~lL~~TFGtLP~cP~~Ip~~---~~~~~~gKivMm 211 (590)
T PF03410_consen 162 -IIGPNIVIFVKE-LN-PNILSLLSNTFGTLPSCPLTIPPN---AFSSIGGKIVMM 211 (590)
T ss_pred -hcCCcEEEEEec-cC-HHHHHHHHHhcCCCCCCcccccCc---cccCCCCcEEEe
Confidence 345566665543 66 667789999999999876543321 012225666654
No 30
>PHA03081 putative metalloprotease; Provisional
Probab=97.64 E-value=0.00084 Score=72.14 Aligned_cols=180 Identities=16% Similarity=0.222 Sum_probs=107.8
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeeeCCCceEEEEEe-ChhhHHHHHHHHHhhccC
Q 001753 106 GMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEI-KREFLKGALMRFSQFFIS 184 (1018)
Q Consensus 106 ~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~-~~~~l~~~L~~~~~~~~~ 184 (1018)
+.|.-.|-.+..|+||++||.+-. +. -.++ -.||+|++.+..|.... .......++.-+..+|+.
T Consensus 26 ~fgfe~di~~~lg~ahllehili~----fd----~~~f------~anast~r~ymsfwc~sirg~~y~DAvrtliSWFF~ 91 (595)
T PHA03081 26 NFGFENDIGEILGIAHLLEHILIS----FD----SSKF------VANASTARSYMSFWCKSIRGRSYIDAIRTLISWFFD 91 (595)
T ss_pred ccccccchHHHHhHHHHHHHHeee----cc----hHHh------cccchhhhhhHhHhhHhhcCCchHHHHHHHHHHhcc
Confidence 667777777899999999999862 22 1222 35889998888888763 334456777777777776
Q ss_pred CC-----CChhHHHHHHHHHHHHHHhhcCChHHHHHHHHHhhCCCCCCCCccccCchhccchhhhcCccHHHHHHHHHHh
Q 001753 185 PL-----MKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMN 259 (1018)
Q Consensus 185 p~-----~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~ 259 (1018)
+. |+...++.-+..+.+|+--+ +.....++.+.-+ .+|.-|. .|...-|.+- . ..++-|.+-. +
T Consensus 92 ~~~Lr~~F~~~~ik~~ikELENEYYFR--nEvfHCmDvLTfL-~gGDLYN---GGRi~ML~~l-~---~i~~~L~~RM-~ 160 (595)
T PHA03081 92 NGKLKDNFSLSKIRNHIKELENEYYFR--NEVFHCMDVLTFL-GGGDLYN---GGRIDMLDNL-N---DVRDMLSNRM-H 160 (595)
T ss_pred CCccccccchhhHHHHHHHHhhhhhhh--hhhHHHHHHHHHh-cCCcccC---CchHHHHhhh-H---HHHHHHHHHH-H
Confidence 63 66666766677777776432 3445556666543 3455653 2333333320 0 1223333333 3
Q ss_pred cCCCCCcEEEEEcCCCHHHHHHHHHHhcccccCCCCCCCCccccccccccceEEEE
Q 001753 260 YYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRL 315 (1018)
Q Consensus 260 ~y~p~n~~lvi~G~~~~~~l~~~v~~~f~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 315 (1018)
.....|.++.|-- ++ +.+..++.+.||.+|..+...+. +......++++..
T Consensus 161 ~I~GpniVIFVk~-ln-~~~l~lL~~TFGtLP~~P~~Ip~---~~~~~i~gKiVMm 211 (595)
T PHA03081 161 RISGPNIVIFVKE-LN-PNTLSLLNNTFGTLPSCPETIPP---PILVSIGGKIVMM 211 (595)
T ss_pred hhcCCcEEEEEec-cC-HHHHHHHHHhcCCCCCCccccCC---CCccCcCCeEEEe
Confidence 3355566666544 66 66778999999999977653332 1122225666654
No 31
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=97.56 E-value=0.00012 Score=76.69 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=96.3
Q ss_pred CCeEeeccCCcEEEEecCCCCCCCeEEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH------H--HhHHhhhcCcEE
Q 001753 568 SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN------E--IIYQASVAKLET 639 (1018)
Q Consensus 568 ~P~~~~~~~g~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~--~~~~~~~~g~~~ 639 (1018)
.|......+|+.|++.+..+ ++.+++++.++....+.+...+..||+.++..... + ......++|+++
T Consensus 69 ~~~~~~~~~~~~v~~~~~~T----nGI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~ 144 (248)
T PF08367_consen 69 IPLEVEKLGGIPVLFHEQPT----NGIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGTKNYSYEELSNEIDLYTGGISF 144 (248)
T ss_dssp ---EECCCTTCEEEEEE-------TTEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEE
T ss_pred CCceeeecCCccEEEEEcCC----CCeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEE
Confidence 45555566789998777654 57788888777765566666778888888765332 1 123445688988
Q ss_pred EEEEeC---------ceeEEEEeecCCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHHhcccC-hhhHHHHHHHH
Q 001753 640 SVSIFS---------DKLELKVYGFNDKLPVLLSKILAIAKSFLPSD-DRFKVIKEDVVRTLKNTNMK-PLSHSSYLRLQ 708 (1018)
Q Consensus 640 ~~~~~~---------~g~~l~~~g~s~~l~~~l~~l~~~l~~p~~~~-~~f~~~k~~~~~~~~~~~~~-p~~~a~~~~~~ 708 (1018)
++.+.. .++.|++.++.++++++++++.++|.++.|+. +++..+..+....+.+...+ ++.+|..++.
T Consensus 145 ~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~~~i~~~Gh~~A~~ra~- 223 (248)
T PF08367_consen 145 SIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDMESSIISSGHSYAMSRAS- 223 (248)
T ss_dssp EEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCC-
T ss_pred EeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH-
Confidence 886653 35889999999999999999999999999975 45666666666666655443 6666654432
Q ss_pred hhcCCCCCHHHHHH-HhccCC
Q 001753 709 VLCQSFYDVDEKLS-ILHGLS 728 (1018)
Q Consensus 709 ~l~~~~~~~~~~~~-~l~~it 728 (1018)
..++..+.+. .+.+++
T Consensus 224 ----s~~s~~~~~~e~~~Gl~ 240 (248)
T PF08367_consen 224 ----SYLSRSGALDELWSGLS 240 (248)
T ss_dssp ----CTT-HHHHHHHHHHSHH
T ss_pred ----hcCCHHHHHHHHHcCHH
Confidence 2445444443 345553
No 32
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=94.68 E-value=0.23 Score=52.18 Aligned_cols=92 Identities=9% Similarity=0.054 Sum_probs=63.1
Q ss_pred ceEEEEEeCCCCCCCCCCCCCchHHHHHhhhcCCcCCCCccHHHHHHHhcCCcceeee----CC-------CceEEEEEe
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYT----ET-------EHTCYHFEI 166 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t----~~-------~~t~~~~~~ 166 (1018)
.+.+.+.+..+.+.+ ++.+=+.-|..-+.-.||++|+. .++...+..+-|.+++++ +. -...+.+.+
T Consensus 91 I~Y~~l~fdl~~l~~-e~l~yl~Ll~~ll~~lgT~~~sy-~el~~~i~~~tGGis~~~~~~~~~~~~~~~~~~l~is~k~ 168 (248)
T PF08367_consen 91 IVYVRLYFDLSDLPE-EDLPYLPLLTDLLGELGTKNYSY-EELSNEIDLYTGGISFSIEVYTDYDDDDKYRPYLVISAKC 168 (248)
T ss_dssp EEEEEEEEE-TTS-C-CCHCCHHHHHHHCCCS-BSSS-H-HHHHHHHHHHSSEEEEEEEEEEEECTECCCEEEEEEEEEE
T ss_pred eEEEEEEecCCCCCH-HHHHhHHHHHHHHHhCCCCCCCH-HHHHHHHHHhCCCeEEEeeeccCCCCccceeEEEEEEEEe
Confidence 999999999986553 45666666666445599999997 689999887644443332 11 123455567
Q ss_pred ChhhHHHHHHHHHhhccCCCCChhH
Q 001753 167 KREFLKGALMRFSQFFISPLMKVEA 191 (1018)
Q Consensus 167 ~~~~l~~~L~~~~~~~~~p~~~~~~ 191 (1018)
..++++++++++.+++.+|.|+...
T Consensus 169 L~~~~~~~~~ll~eil~~~~f~d~~ 193 (248)
T PF08367_consen 169 LDEKLDEAFELLSEILTETDFDDKE 193 (248)
T ss_dssp EGGGHHHHHHHHHHHHHCB-TT-HH
T ss_pred HhhhHHHHHHHHHHHHhccCCCcHH
Confidence 8899999999999999999998875
No 33
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=51.27 E-value=24 Score=23.14 Aligned_cols=16 Identities=19% Similarity=0.524 Sum_probs=14.0
Q ss_pred cCCCHHHHHHHHHHHH
Q 001753 898 EGLDDESFENYRSGLM 913 (1018)
Q Consensus 898 ~~is~~el~~ak~~l~ 913 (1018)
+-||++||++.|..++
T Consensus 15 G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 15 GEISEEEYEQKKARLL 30 (31)
T ss_pred CCCCHHHHHHHHHHHh
Confidence 4599999999999876
No 34
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=42.27 E-value=71 Score=24.03 Aligned_cols=50 Identities=8% Similarity=0.130 Sum_probs=42.7
Q ss_pred CCCCccHHHHHHHhcCCcceeeeCCCceEEEEEeChhhHHHHHHHHHhhc
Q 001753 133 EFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFF 182 (1018)
Q Consensus 133 ~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~~~~~~ 182 (1018)
.|+.-+.+..+|+++++.+--....+...+.+.++.+..+...+.+.++.
T Consensus 4 ~Y~~~~~v~~~l~~~~~~i~~~~y~~~V~~~v~v~~~~~~~f~~~l~~~t 53 (56)
T PF09186_consen 4 DYSQYGKVERLLEQNGIEIVDEDYTDDVTLTVAVPEEEVEEFKAQLTDLT 53 (56)
T ss_dssp -CCCHHHHHHHHHHTTTEEEEEEECTTEEEEEEEECCCHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHCCCEEEcceecceEEEEEEECHHHHHHHHHHHHHHc
Confidence 36666788999999999998888888899999999999999998888764
No 35
>cd08317 Death_ank Death domain associated with Ankyrins. Death Domain (DD) associated with Ankyrins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. Ankyrins function as adaptor proteins and they interact, through ANK repeats, with structurally diverse membrane proteins, including ion channels/pumps, calcium release channels, and cell adhesion molecules. They play critical roles in the proper expression and membrane localization of these proteins. In mammals, this family includes ankyrin-R for restricted (or ANK1), ankyrin-B for broadly expressed (or ANK2) and ankyrin-G for general or giant (or ANK3). They are expressed in different combinations in many tissues and play non-overlapping functions. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-associati
Probab=26.28 E-value=3.9e+02 Score=22.34 Aligned_cols=74 Identities=14% Similarity=0.223 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHH---HHHHhcCCCCCCccHHHHHHHhcCC
Q 001753 879 PIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRF---WNQITDKRYMFDQSQKEAEDLKSIK 955 (1018)
Q Consensus 879 ~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~---~~~i~~~~~~f~~~~~~~~~i~~vT 955 (1018)
...+.+.+..-+.++...+ ++++.+++.++.. .+.+..+.+..+ |.+- .+ .-......+++|..+.
T Consensus 7 l~~ia~~lG~dW~~LAr~L-g~~~~dI~~i~~~-------~~~~~~eq~~~mL~~W~~r--~g-~~at~~~L~~AL~~i~ 75 (84)
T cd08317 7 LADISNLLGSDWPQLAREL-GVSETDIDLIKAE-------NPNSLAQQAQAMLKLWLER--EG-KKATGNSLEKALKKIG 75 (84)
T ss_pred HHHHHHHHhhHHHHHHHHc-CCCHHHHHHHHHH-------CCCCHHHHHHHHHHHHHHh--cC-CcchHHHHHHHHHHcC
Confidence 4566777777788887654 7999999988753 223333333333 4333 22 2345678889999999
Q ss_pred HHHHHHHH
Q 001753 956 KNDVISWY 963 (1018)
Q Consensus 956 ~edv~~~~ 963 (1018)
+.||.+.+
T Consensus 76 r~Di~~~~ 83 (84)
T cd08317 76 RDDIVEKC 83 (84)
T ss_pred hHHHHHHh
Confidence 99988653
No 36
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional
Probab=26.23 E-value=2.6e+02 Score=26.24 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=40.5
Q ss_pred cHHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhh
Q 001753 356 SLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 433 (1018)
Q Consensus 356 ~L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~ 433 (1018)
++.+.|.++||+....... |.. . ..+.+|+.|.+-.+++...+.+.+..-.-.++++++++.....+
T Consensus 73 r~l~~Le~~GlI~R~~~~~-----DrR----~--~~l~LT~~G~~~~~~~~~~~~~~~~~~l~~~ls~ee~~~l~~~L 139 (144)
T PRK11512 73 RMLDRLVCKGWVERLPNPN-----DKR----G--VLVKLTTSGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLL 139 (144)
T ss_pred HHHHHHHHCCCEEeccCcc-----cCC----e--eEeEEChhHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 3556777899998654322 222 3 34466888865556655555433332234689999888876654
No 37
>PF05120 GvpG: Gas vesicle protein G ; InterPro: IPR007804 Gas vesicles are intracellular, protein-coated, and hollow organelles found in cyanobacteria and halophilic archaea. They are permeable to ambient gases by diffusion and provide buoyancy, enabling cells to move upwards in water to access oxygen and/or light. Proteins containing this family are involved in the formation of gas vesicles [].
Probab=25.61 E-value=2e+02 Score=23.87 Aligned_cols=39 Identities=21% Similarity=0.490 Sum_probs=26.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Q 001753 877 YNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLL 917 (1018)
Q Consensus 877 ~~~~~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~ 917 (1018)
++|..+...+.+.-..+. .+.||++||++...-|+..+.
T Consensus 28 ~Dp~~i~~~L~~L~~~~e--~GEIseeEf~~~E~eLL~rL~ 66 (79)
T PF05120_consen 28 YDPAAIRRELAELQEALE--AGEISEEEFERREDELLDRLE 66 (79)
T ss_pred cCHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHHHH
Confidence 456655444444333332 267999999999999998875
No 38
>PRK03573 transcriptional regulator SlyA; Provisional
Probab=22.57 E-value=3.4e+02 Score=25.29 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=42.4
Q ss_pred HHHHHHhcCccceecccccCccCCccccceEEEEEEEeChhhhhhHHHHHHHHHHHHHHHHhcCCchHHHHHHHHhh
Q 001753 357 LHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 433 (1018)
Q Consensus 357 L~~~Lr~~gla~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~ 433 (1018)
+...|.++||+....... |.. . ..+.+|+.|.+-.+++.....+..+.+ -.++++++.+.....+
T Consensus 66 ~v~~Le~~GlV~r~~~~~-----DrR----~--~~l~LT~~G~~~~~~~~~~~~~~~~~~-~~~l~~ee~~~l~~~l 130 (144)
T PRK03573 66 TLDQLEEKGLISRQTCAS-----DRR----A--KRIKLTEKAEPLISEVEAVINKTRAEI-LHGISAEEIEQLITLI 130 (144)
T ss_pred HHHHHHHCCCEeeecCCC-----CcC----e--eeeEEChHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHH
Confidence 556677899998654321 222 2 445778899766666666665555555 4689998888876653
No 39
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=21.77 E-value=65 Score=27.15 Aligned_cols=22 Identities=23% Similarity=0.080 Sum_probs=16.3
Q ss_pred ccccccEEEecCCCEEEEEeCCCC
Q 001753 20 DKRLYRVIELENRLCALLVHDPEI 43 (1018)
Q Consensus 20 ~~~~~~~~~L~NGl~v~~~~~~~~ 43 (1018)
|...+| -|.|||+|+.+|-.-.
T Consensus 5 ~R~GvR--yltngLKVYYlP~~~~ 26 (90)
T PF08288_consen 5 DRVGVR--YLTNGLKVYYLPLKVF 26 (90)
T ss_pred CcceeE--EcCCCeEEEeecchhh
Confidence 445555 4889999999987744
No 40
>cd08805 Death_ank1 Death domain of Ankyrin-1. Death Domain (DD) of the human protein ankyrin-1 (ANK-1) and related proteins. Ankyrins are modular proteins comprising three conserved domains, an N-terminal membrane-binding domain containing ANK repeats, a spectrin-binding domain and a C-terminal DD. ANK-1, also called ankyrin-R (for restricted), is found in brain, muscle, and erythrocytes and is thought to function in linking integral membrane proteins to the underlying cytoskeleton. It plays a critical nonredundant role in erythroid development and is associated with hereditary spherocytosis (HS), a common disorder of the red cell membrane. The small alternatively-spliced variant, sANK-1, found in striated muscle and concentrated in the sarcoplasmic reticulum (SR) binds obscurin and titin, which facilitates the anchoring of the network SR to the contractile apparatus. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common featur
Probab=20.29 E-value=5.3e+02 Score=21.73 Aligned_cols=74 Identities=18% Similarity=0.116 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHH
Q 001753 881 YLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVI 960 (1018)
Q Consensus 881 ~~~~~i~~~l~~~~~~~~~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~ 960 (1018)
.+.+.+..-+.++...+ ++|+.++..++... +.++.+.+..+...+....-..-..+..+.+|+++.+.||.
T Consensus 9 ~Ia~~LG~dW~~Lar~L-~vs~~dI~~I~~e~-------p~~l~~Q~~~~L~~W~~r~g~~At~~~L~~AL~~i~R~div 80 (84)
T cd08805 9 VIREHLGLSWAELAREL-QFSVEDINRIRVEN-------PNSLLEQSTALLNLWVDREGENAKMSPLYPALYSIDRLTIV 80 (84)
T ss_pred HHHHHhcchHHHHHHHc-CCCHHHHHHHHHhC-------CCCHHHHHHHHHHHHHHhcCccchHHHHHHHHHHCChHHHH
Confidence 44455555566665543 79999999887652 34444444444333332222344667888999999999998
Q ss_pred HH
Q 001753 961 SW 962 (1018)
Q Consensus 961 ~~ 962 (1018)
..
T Consensus 81 ~~ 82 (84)
T cd08805 81 NM 82 (84)
T ss_pred Hh
Confidence 65
No 41
>PF09568 RE_MjaI: MjaI restriction endonuclease; InterPro: IPR019068 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry includes the MjaI (recognises CTAG but cleavage site unknown) restriction endonuclease. ; GO: 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system
Probab=20.27 E-value=2.4e+02 Score=27.16 Aligned_cols=53 Identities=21% Similarity=0.351 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHhcCCHHHHHHHHHHhc
Q 001753 899 GLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYL 967 (1018)
Q Consensus 899 ~is~~el~~ak~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~f~~~~~~~~~i~~vT~edv~~~~~k~l 967 (1018)
+-|-+|.+ ...... .++.+......+|..+ .+..+.+++||.+|+.++.+..+
T Consensus 31 ~kt~eeWe---~wY~~~---~~e~i~~a~~ki~~~i----------~e~~~a~~~it~ed~~~wv~dLv 83 (170)
T PF09568_consen 31 PKTIEEWE---EWYFEK---YPEAIEEATDKIYVMI----------TEVKEALNKITEEDCINWVKDLV 83 (170)
T ss_pred CCCHHHHH---HHHHhc---ChHHHHHHHHHHHHHH----------HHHHHHHHhCCHHHHHHHHHHhe
Confidence 34444444 444444 4566777777777665 45667799999999999998766
Done!