Query 001753
Match_columns 1018
No_of_seqs 265 out of 3181
Neff 9.7
Searched_HMMs 29240
Date Tue Mar 26 16:18:04 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001753.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1051-1055//hhsearch_pdb/001753hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q2l_A Protease III; hydrolase 1.0 1 1 992.2 105.3 926 10-1017 7-937 (939)
2 3cww_A Insulysin, insulin-degr 1.0 1 1 985.3 110.8 941 6-1018 17-980 (990)
3 2fge_A Atprep2;, zinc metallop 1.0 1 1 709.8 53.5 861 13-991 27-981 (995)
4 3s5m_A Falcilysin; M16 metallo 1.0 1 1 657.0 50.3 873 15-993 78-1181(1193)
5 3eoq_A Putative zinc protease; 1.0 1 1 457.5 36.6 400 24-499 2-404 (406)
6 3ami_A Zinc peptidase; alpha/b 1.0 1 1 456.7 41.0 412 22-500 5-423 (445)
7 3hdi_A Processing protease; CA 1.0 1 1 440.5 37.4 403 23-500 1-405 (421)
8 1pp9_A Ubiquinol-cytochrome C 1.0 1 1 426.7 38.2 411 18-500 8-429 (446)
9 1hr6_B Beta-MPP, mitochondrial 1.0 1 1 418.7 38.1 408 22-499 5-428 (443)
10 1hr6_A Alpha-MPP, mitochondria 1.0 1 1 412.0 36.8 403 21-499 3-437 (475)
No 1
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=1.00 E-value=1 Score=992.21 Aligned_cols=926 Identities=24% Similarity=0.396 Sum_probs=808.3
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 68863369786466217893689889999679999777754335897655434467556653355433444401121014
Q 001753 10 SDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKG 89 (1018)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (1018)
..+.++|++.|.+.|+.++|+|||+|++++++.. +
T Consensus 7 ~~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~--------------~------------------------------- 41 (939)
T 1q2l_A 7 IQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQA--------------V------------------------------- 41 (939)
T ss_dssp CCSCCCCCTTCCCEEEEEEETTSCEEEEEECTTC--------------S-------------------------------
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCC--------------C-------------------------------
T ss_conf 5566727988886548999369998999978898--------------8-------------------------------
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHH
Q ss_conf 56555345027999917778889999998249998761058767999007999999539962034289824899982910
Q 001753 90 KGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKRE 169 (1018)
Q Consensus 90 ~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~ 169 (1018)
.+++++++++|+++||.+.+|+|||+|||+|+||++||..+++.++++.+||.+||+|+.|+|+|+++++++
T Consensus 42 --------~~~~~l~v~~Gs~~e~~~~~GlAH~lEHmlf~Gt~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~~~~~~~ 113 (939)
T 1q2l_A 42 --------KSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVEND 113 (939)
T ss_dssp --------SEEEEEEESCCGGGCCGGGTTHHHHHHHHTTSCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEEEEECGG
T ss_pred --------CEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHH
T ss_conf --------168999967258889999985699999878068887999365999999769951579889867999994789
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCH
Q ss_conf 09999999995110789992679999989999998611993999999998407999999866657433010042059228
Q 001753 170 FLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINL 249 (1018)
Q Consensus 170 ~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~ 249 (1018)
+++.+|+++++++.+|.|+++.+++|+++|.+|++.+.++|.+++.+.+..++|++|||+++++|+.++|.+ .++.++
T Consensus 114 ~l~~~L~~l~d~~~~p~f~~~~~~~Er~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~--~~~~~~ 191 (939)
T 1q2l_A 114 ALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSD--KPGNPV 191 (939)
T ss_dssp GHHHHHHHHHHHHHCBCCCSTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHSSCTTSGGGSCCSCCHHHHSC--BTTBCH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC--CCCCHH
T ss_conf 999999999999857799989999999999999985649879999999997568999976678899999716--788459
Q ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCEEEEEEECCCCCEEEE
Q ss_conf 99999999821788871999984998889999999762434589888987654443344---540899986266647999
Q 001753 250 QEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVKDVHILDL 326 (1018)
Q Consensus 250 ~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~i 326 (1018)
+++|++||++||+|+||+|+|+||+++++++++++++|+.||++..+.+.+. .++.. .+..+...+..++.++.+
T Consensus 192 ~~~l~~f~~~~Y~p~n~~l~v~G~~~~~~l~~~v~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~i 269 (939)
T 1q2l_A 192 QQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEIT--VPVVTDAQKGIIIHYVPALPRKVLRV 269 (939)
T ss_dssp HHHHHHHHHHHCCTTTCEEEEEESSCHHHHHHHHHHTGGGSCCCCCCCCCCC--SCSCCGGGSSEEEEECCSSCCCEEEE
T ss_pred HHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCHHHCCEEEEEEECCCCCEEEE
T ss_conf 9999999996158735699997499999999999998643335887899788--89999789477999982787718999
Q ss_pred EEECCCCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHH
Q ss_conf 99658960433039099999972389998189999856753313022267667765431079999990932363099999
Q 001753 327 TWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDII 406 (1018)
Q Consensus 327 ~~~~p~~~~~~~~~~~~ll~~iLg~~~~~~L~~~Lr~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~ 406 (1018)
+|++|...+.++..++.+++.+||+++.|+|+..||++||+|+++++.... ...+.|.|.|++.+++.|.+++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~l~~lLg~~~~s~L~~~L~~~gl~~~~~a~~~~~---~~~~~g~f~i~~~~~~~~~~~~~~~~ 346 (939)
T 1q2l_A 270 EFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPI---VNGNSGVLAISASLTDKGLANRDQVV 346 (939)
T ss_dssp EEEEECCGGGGGGCHHHHHHHHHHCCCTTSHHHHHHHTTCEEEEEEEEESS---TTSSEEEEEEEEEECHHHHHTHHHHH
T ss_pred EEECCCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHCCCCHHEEECCCCC---CCCCCEEEEEEEEECHHHHHHHHHHH
T ss_conf 997687277665478999999956899871999998769712124334555---68885189999998946665299999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 99999999999629924799999986303411466899079999999855799954422235335579899999998402
Q 001753 407 GFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFF 486 (1018)
Q Consensus 407 ~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~t~e~i~~~~~~l 486 (1018)
+.++++|+.+++.|+++++++++|+.....|.+....++..++..++..+..+++++++.....++++|+++|+++++++
T Consensus 347 ~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~vt~~~i~~~~~~l 426 (939)
T 1q2l_A 347 AAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMM 426 (939)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTSCGGGTTTTTTCCCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCHHHHHHHHHHC
T ss_conf 99999999998679859999999999872203457788599999999986508999971172213106999999999846
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCEECCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 96861999980897777776303312020000038926898424999999866699999899988310015778897788
Q 001753 487 MPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTV 566 (1018)
Q Consensus 487 ~~~~~~i~~~~p~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~~~~~~ 566 (1018)
.++++++++++|. ...+..++||+++|.+.+++.+.++.|....+ ...+.+|..|+|+|+++.+...... .
T Consensus 427 ~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~n~~~~~~~~~~~~~~~-----~ 497 (939)
T 1q2l_A 427 TPQNARIWYISPK---EPHNKTAYFVDAPYQVDKISAQTFADWQKKAA-DIALSLPELNPYIPDDFSLIKSEKK-----Y 497 (939)
T ss_dssp SGGGCEEEEECTT---CCCCEECTTTCCEEEEEECCHHHHHHHHHHHH-TCCCCCCCCCTTCCCCCCCCCCSSC-----C
T ss_pred CHHHCEEEEECCC---CCCCCCCCEECCEEEEEECCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC-----C
T ss_conf 9877489998278---88773345437742563089999998754686-5356699977678867530567678-----9
Q ss_pred CCCEEEECCCCCEEEEECCCCCCCC-EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9984863169827998317977897-079999997189977999999999999999999978857763338289998717
Q 001753 567 TSPTCIIDEPLIRFWYKLDNTFKLP-RANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFS 645 (1018)
Q Consensus 567 ~~p~~i~~~~g~~v~~~~~~~f~~P-k~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 645 (1018)
..|..+.+++|++||+++++.|+.| ++.+++.+.+|....++++.++..|+..++...+.+..+.+.++|++++++. .
T Consensus 498 ~~p~~~~l~ng~~v~~~~~~~f~~pp~~~i~l~~~~~~~~~~~~~~~~~~l~~~ll~~g~~~~~~~~~l~G~~~~~~~-~ 576 (939)
T 1q2l_A 498 DHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNA-N 576 (939)
T ss_dssp SSCEEEEEETTEEEEEECCSSCTTSSEEEEEEEEECGGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-S
T ss_pred CCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-C
T ss_conf 999799977981685557875589986799999958965589999999999999999999987527997694899960-8
Q ss_pred CEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 616999960499889999999999840799988999999999999983214-9145899999985048999998999873
Q 001753 646 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSIL 724 (1018)
Q Consensus 646 ~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~~~~~~~~l 724 (1018)
+|+.++++|++++++.+++++.+.+.+|.|++++|+++|++++..+++... +|..++.+.+..+++.+.|+..+.++.|
T Consensus 577 ~g~~~~~~g~~~~l~~~l~ll~~~l~~p~~~~~~f~~~k~~~~~~l~~~~~~~p~~~a~~~l~~~l~~~~~~~~~~~~~l 656 (939)
T 1q2l_A 577 NGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKIL 656 (939)
T ss_dssp SEEEEEEEEESSSHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHTTSSSCCCHHHHHHHG
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 95799997656769999999999974789899999999999999976342068399999999999668999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCC
Q ss_conf 05999999999999985011578873389999999999999946158999922235540688699982899743589788
Q 001753 725 HGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCE 804 (1018)
Q Consensus 725 ~~it~edl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1018)
+++|++++.+|+++++.+.+++++|+||++.++++.+++.+++.|+..+.+. ........+.+....+.. ..+..
T Consensus 657 ~~it~~~l~~f~~~~~~~~~~~~~vvGn~~~~~~~~l~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~ 731 (939)
T 1q2l_A 657 PSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEW---CRNKDVVVDKKQSVIFEK--AGNST 731 (939)
T ss_dssp GGCCHHHHHHHHHHHHTTCEEEEEEEESCCHHHHHHHHHHHHHHHTCCCSCC---CCCEEECCCSCEEEEEEE--CCSSS
T ss_pred HCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC---CCCCEEEECCCCEEEEEC--CCCCC
T ss_conf 5189999999999998642089999759899999999999999973688655---545358707995489966--89998
Q ss_pred CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCHHHHHH
Q ss_conf 67278999982235585628999999999998513446874200134259994345537833699999689999467999
Q 001753 805 TNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQE 884 (1018)
Q Consensus 805 ~~~~v~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~LgY~v~a~~~~~~~~~~~~~~v~s~~~~~~~l~~ 884 (1018)
.++.+..+++. +..+.++.+++.+|+++++++||++|||++||||+|+|+.....+..|+.|.||++..+++.+..
T Consensus 732 ~~~~~~~~~~~----~~~~~~~~~~~~lL~~~~~s~lf~~LRek~gl~Y~v~s~~~~~~~~~g~~~~i~s~~~~p~~~~~ 807 (939)
T 1q2l_A 732 DSALAAVFVPT----GYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWE 807 (939)
T ss_dssp CEEEEEEEECS----SCCHHHHHHHHHHHHHHHHHHHTHHHHTSCCSSSCEEEEEEEETTEEEEEEEEEESSSCHHHHHH
T ss_pred CCEEEEEEEEC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHH
T ss_conf 74269999966----99999999999999999888889999999874715534676539756899999879999899999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999999999970799899999999999987089999789999989998328888885189999981599999999999
Q 001753 885 RIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYK 964 (1018)
Q Consensus 885 ~i~~~l~~~~~~~~~ite~el~~~K~~li~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vT~edi~~~~~ 964 (1018)
++..|++++...+.++|++||+++|+++++++....+++...+.++|..+..+++.|++.+.+++.|++||++||+++++
T Consensus 808 ~i~~~~~~~~~~~~~~t~~el~~~k~~l~~~~~~~~~s~~~~~~~~w~~i~~~~~~~d~~~~~~~~i~~vT~~dv~~~a~ 887 (939)
T 1q2l_A 808 RYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFH 887 (939)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99999999999998689999999999999986179998999999999998538988786899999986089999999999
Q ss_pred HHCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCEECCHHHHHHCCCCCCCC
Q ss_conf 86135899855799999548889300100257750306948886038423368
Q 001753 965 TYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSL 1017 (1018)
Q Consensus 965 k~l~~~~~~~~~l~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1017 (1018)
+|+. ++.+.+++++|+|+.....+++.. +++..|++|.+||+..++||.+
T Consensus 888 ~~l~--~~~~~~l~v~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 937 (939)
T 1q2l_A 888 QAVV--EPQGMAILSQISGSQNGKAEYVHP-EGWKVWENVSALQQTMPLMSEK 937 (939)
T ss_dssp HHTT--SCSSEEEEEEECCSSHHHHCCCCC-TTCEECSCHHHHHTTSCEEECC
T ss_pred HHHC--CCCCCEEEEEEECCCCCCCCCCCC-CCCCEECCHHHHHHCCCCCCCC
T ss_conf 9844--777777999996678875310146-7770707899984347665314
No 2
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Probab=1.00 E-value=1 Score=985.35 Aligned_cols=941 Identities=36% Similarity=0.625 Sum_probs=819.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 74346886336978646621789368988999967999977775433589765543446755665335543344440112
Q 001753 6 CVWSSDEIVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEK 85 (1018)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (1018)
++-...+.++|+.+|.+.|+.++|+|||+|++++++.. +
T Consensus 17 ~~~~~~~~~~~~~~d~~~~~~~~L~NGl~v~~~~~~~~--------------~--------------------------- 55 (990)
T 3cww_A 17 AIKRIGNHITKSPEDKREYRGLELANGIKVLLISDPTT--------------D--------------------------- 55 (990)
T ss_dssp TEEEECSCCCCCTTCCCEEEEEEETTCCEEEEEECTTC--------------S---------------------------
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCC--------------C---------------------------
T ss_conf 51035776657988875559999479988999978899--------------8---------------------------
Q ss_pred HHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEE
Q ss_conf 10145655534502799991777888999999824999876105876799900799999953996203428982489998
Q 001753 86 EVKGKGIFSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFE 165 (1018)
Q Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~ 165 (1018)
.+++++++++|+++||.+.+|+|||+|||+|+||++||.+++|.++++.+||.+||+|+.|+|+|+++
T Consensus 56 ------------~~~~~l~v~~Gs~~ep~~~~GlAH~lEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~T~~d~T~y~~~ 123 (990)
T 3cww_A 56 ------------KSSAALDVHIGSLSDPPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFD 123 (990)
T ss_dssp ------------EEEEEEEESCCGGGSCTTSTTHHHHHHHHGGGCBSSSCSTTHHHHHHHTTTCEEEEEECSSCEEEEEE
T ss_pred ------------CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEE
T ss_conf ------------17899995525877999999739999998806887799805699999976995068988984599999
Q ss_pred ECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCH-HHH
Q ss_conf 2910099999999951107899926799999899999986119939999999984079999998666574330100-420
Q 001753 166 IKREFLKGALMRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG-AME 244 (1018)
Q Consensus 166 ~~~~~l~~~L~~l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~-~~~ 244 (1018)
+++++++.+|+++++++.+|.|+++.|++|+.+|.+|++.+.+++.+++.+.+..+++++|||+++++|+.++|.+ +..
T Consensus 124 ~~~~~l~~~l~~~~d~~~~p~f~~~~~~~E~~~V~~E~~~~~~~~~~~~~~~~~~~~~~~~py~~~~~G~~~~l~~~~~~ 203 (990)
T 3cww_A 124 VSHEHLEGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQ 203 (990)
T ss_dssp EEGGGHHHHHHHHHGGGTCBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTSCTTSGGGCCCSCCHHHHTHHHHH
T ss_pred ECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 37899999999999998575899899999999999999855388399999999985689999634788989998402010
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCEEEEEEECCCC
Q ss_conf 5922899999999821788871999984998889999999762434589888987654443344---5408999862666
Q 001753 245 KGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK---ACKLFRLEAVKDV 321 (1018)
Q Consensus 245 ~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 321 (1018)
++..++++|++||++||+|+||+|+|+||+++++++++|+++|+.||++..+.+.+. .++.. .+..+...+..++
T Consensus 204 ~~~~~~~~l~~f~~~~Y~p~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 281 (990)
T 3cww_A 204 EGIDVRQELLKFHSAYYSSNLMAVVVLGRESLDDLTNLVVKLFSEVENKNVPLPEFP--EHPFQEEHLKQLYKIVPIKDI 281 (990)
T ss_dssp TTCCHHHHHHHHHHHHCCGGGEEEEEEESSCHHHHHHHHHHHHTTSCCCCCCCCCCC--SCSSCGGGSSEEEEECCSSSC
T ss_pred CCCHHHHHHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCHHHCCEEEEEEECCCC
T ss_conf 465299999999997177866389998699999999999997137865788899888--899996780769999987877
Q ss_pred CEEEEEEECCCCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHH
Q ss_conf 47999996589604330390999999723899981899998567533130222676677654310799999909323630
Q 001753 322 HILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEK 401 (1018)
Q Consensus 322 ~~v~i~~~~p~~~~~~~~~~~~ll~~iLg~~~~~~L~~~Lr~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 401 (1018)
..+.++|++|...+.++..++.+++++||+++.++|+..||++||+|+++++......+ .|.|.|++.+++.|.++
T Consensus 282 ~~l~~~~~~~~~~~~~~~~~~~~l~~lLg~~~~~sl~~~Lr~~g~~~~~~a~~~~~~~~----~~~f~i~~~~~~~g~~~ 357 (990)
T 3cww_A 282 RNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKAGARG----FMFFIINVDLTEEGLLH 357 (990)
T ss_dssp CEEEEEEEECCCGGGTTTCHHHHHHHHHTCCSTTCHHHHHHHTTSCSCEEEEEEEEETT----EEEEEEEEECCHHHHHT
T ss_pred CEEEEEEECCCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCCCCC----CCEEEEEEEECHHHHHH
T ss_conf 48999997688056555588999999956999994899998779711256535667788----51799999988477654
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999999999999996299247999999863034114668990799999998557999544222353355798999999
Q 001753 402 IFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKH 481 (1018)
Q Consensus 402 ~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~t~e~i~~ 481 (1018)
++++++.++++|+.+++.|++++++++++......|.++...++..++..++..+...++++++.....+.++|+++|++
T Consensus 358 ~~~~~~~i~~~l~~l~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~t~~~i~~ 437 (990)
T 3cww_A 358 VEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEM 437 (990)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTTSCGGGTTTTTTCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCHHHHHH
T ss_conf 99999999999999985798389999999999973666776997999999999986279999732622453189999999
Q ss_pred HHHHCCCCCEEEEEEECCCCCCCCCCCCCEECCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 98402968619999808977777763033120200000389268984249999998666999998999883100157788
Q 001753 482 LLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISN 561 (1018)
Q Consensus 482 ~~~~l~~~~~~i~~~~p~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~ 561 (1018)
+++++.++++++++++|.+ .......++||+++|.+..++.+.++.|..... ...+.+|+.|+|+|+++.+.......
T Consensus 438 ~~~~l~~~~~~~~~~~p~~-~~~~~~~e~~~~~~y~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~ip~~~~~~~~~~~~ 515 (990)
T 3cww_A 438 VLDKLRPENVRVAIVSKSF-EGKTDRTEEWYGTQYKQEAIPDAVIAKWQNAAL-NGKFKLPTKNEFIPTNFEILPLEAAA 515 (990)
T ss_dssp HHTTCSGGGCEEEEECGGG-TTCCCEECTTTCCEEEEEECCHHHHHHHHTCCC-CTTCCCCCCCTTCCCCCCCCCCCTTC
T ss_pred HHHHCCHHHEEEEEECCCC-CCCCCCCCCEECCEEEEECCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9984697677999973777-777673331637621562389999997645788-74556999887788665004577788
Q ss_pred CCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 97788998486316982799831797789707999999718997799999999999999999997885776333828999
Q 001753 562 DLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSV 641 (1018)
Q Consensus 562 ~~~~~~~p~~i~~~~g~~v~~~~~~~f~~Pk~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~ 641 (1018)
...|..+...+|+++|++++++|++|++.+++.+.++....+++..++..|++.++...+++..+.+.++|+++++
T Consensus 516 ----~~~p~~~~~~ng~~v~~~~~~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~L~~~ll~~~~~~~~~~~~l~G~~~~~ 591 (990)
T 3cww_A 516 ----TPYPALIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDL 591 (990)
T ss_dssp ----CSSCEEEEECSSEEEEEEECSSCCCSEEEEEEEEECGGGTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred ----CCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf ----8999565438871675516876578868999999689777999999999999999999987864489868748999
Q ss_pred EEECCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 8717616999960499889999999999840799988999999999999983214-914589999998504899999899
Q 001753 642 SIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEK 720 (1018)
Q Consensus 642 ~~~~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~~~~~ 720 (1018)
+++.+++.++++|++++++.+++++.+.+.+|.|++++|+.+|++++..+++... +|+.++...+..+++.+.|...+.
T Consensus 592 ~~~~~~~~~~~~g~~~~l~~~l~ll~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~~p~~~a~~~~~~~l~~~~~~~~~~ 671 (990)
T 3cww_A 592 QNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDEL 671 (990)
T ss_dssp EEETTEEEEEEEEESTTHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHBSSCCCHHHH
T ss_pred EECCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 97687599999842186899999999998658989999999999999998866624859999999999967899999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHH---HHHHHHHHCCC-CCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 98730599999999999998501157887338999999999---99999461589-999222355406886999828997
Q 001753 721 LSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHI---SNIFKSIFSVQ-PLPIEMRHQECVICLPSGANLVRN 796 (1018)
Q Consensus 721 ~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gni~~~~a~~l---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1018)
.+.|++++++++.+|+++++.+.+++++|+||++.+++..+ +..+++.++.. +.+....+..+...++.+...++.
T Consensus 672 ~~~l~~lt~~~l~~~~~~~~~~~~~~~~v~Gn~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (990)
T 3cww_A 672 KEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLAAYREVQLPDRGWFVYQ 751 (990)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHCCEECCGGGCCCCCBBCCCTTEEEEEE
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEECCCCCEEEEE
T ss_conf 99885299999999999998641189999758899999999999999983467778874333133544883899869997
Q ss_pred ECCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECCC
Q ss_conf 43589788672789999822355856289999999999985134468742001342599943455378336999996899
Q 001753 797 VSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSK 876 (1018)
Q Consensus 797 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LRek~~LgY~v~a~~~~~~~~~~~~~~v~s~~ 876 (1018)
. ..+...++++..+++. +..+.++.+++.+++++|++++|++|||++||||+|+|++....+..++.|.+||+
T Consensus 752 ~--~~~~~~~~~v~~~~~~----~~~~~~~~~~l~ll~~il~~~lf~~LRek~~lgY~v~s~~~~~~g~~~~~~~vqs~- 824 (990)
T 3cww_A 752 Q--RNEVHNNSGIEIYYQT----DMQSTSENMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSE- 824 (990)
T ss_dssp E--ECSSCSSEEEEEEEEE----EECCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSEEEEEEEEETTEEEEEEEEEES-
T ss_pred E--CCCCCCCCEEEEEEEC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECC-
T ss_conf 0--6888888379999967----99999999999999999888999998711277579988878638978899999379-
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH
Q ss_conf 99467999999999999999707998999999999999870899997899999899983288888851899999815999
Q 001753 877 YNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKK 956 (1018)
Q Consensus 877 ~~~~~l~~~i~~~l~~~~~~~~~ite~el~~~K~~li~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vT~ 956 (1018)
++|+++.++|..|+..+...+.++|++||+++|.++++++...+.++..++.++|..+..+.+.|+..+++++.|+++|+
T Consensus 825 ~dp~~~~~~i~~f~~~~~~l~~~~te~el~~~k~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~d~~~~~~~~i~~vT~ 904 (990)
T 3cww_A 825 KPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTK 904 (990)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCCCSSHHHHHHHHHHHHHTTCCCTTHHHHHHHHHTTCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 99999999999999999999985699999999999999851799889999999999997489887767999999982899
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC----------HHH----HCCCCCCEECCHHHHHHCCCCCCCCC
Q ss_conf 999999998613589985579999954888930----------010----02577503069488860384233689
Q 001753 957 NDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIK----------ESE----KHSKSALVIKDLTAFKLSSEFYQSLC 1018 (1018)
Q Consensus 957 edi~~~~~k~l~~~~~~~~~l~~~v~G~~~~~~----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1018)
+||++++++++.+++..+++++++|+|+...+. ++. ...+++..|++|.+||+++++||..|
T Consensus 905 ~di~~~a~~~l~~~~~~~~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (990)
T 3cww_A 905 ADIIKFYKEMLAVDAPRRHKVSVHVLAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQNMTAFKRGLPLFPLVK 980 (990)
T ss_dssp HHHHHHHHHHTSTTCTTCEEEEEEEECTTC----------------CCCCCCCCCCEECSCHHHHHHTSCBCCCCC
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCHHHHHHCCCCCCCCC
T ss_conf 9999999998603688777799999777875333322222201222101224788707168999952586534677
No 3
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
Probab=1.00 E-value=1 Score=709.75 Aligned_cols=861 Identities=12% Similarity=0.068 Sum_probs=631.5
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
Q ss_conf 63369786466217893689889999679999777754335897655434467556653355433444401121014565
Q 001753 13 IVIKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGI 92 (1018)
Q Consensus 13 ~~~~~~~~~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (1018)
....+..+.+.|++.+|+||++|++++++.. +
T Consensus 27 ~~~~~~~~~~~~~~~~l~nGl~v~~~~~~~~--------------~---------------------------------- 58 (995)
T 2fge_A 27 EEFISECKSKAILFKHKKTGCEVMSVSNEDE--------------N---------------------------------- 58 (995)
T ss_dssp EEEETTTTEEEEEEEETTTCCEEEEEECSCS--------------S----------------------------------
T ss_pred EEECCCCCCEEEEEEECCCCCEEEEEECCCC--------------C----------------------------------
T ss_conf 8703211545799999789988999976998--------------6----------------------------------
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH-CCCCCEEEECCCCEEEEEEEC-HHH
Q ss_conf 553450279999177788899999982499987610587679990079999995-399620342898248999829-100
Q 001753 93 FSQTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK-HGGSSNAYTETEHTCYHFEIK-REF 170 (1018)
Q Consensus 93 ~~~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~-~g~~~na~t~~~~t~~~~~~~-~~~ 170 (1018)
. ++.+|++.+|.+..|+||++|||+|+||++||..+.+.+++.. .|+.+||+|+.|+|+|++.++ .++
T Consensus 59 -----~-----~~~vg~~~e~~~~~GlAH~lEHm~f~Gt~~~p~~~~~~~~l~~~~g~~~NA~T~~d~T~y~~~~~~~~~ 128 (995)
T 2fge_A 59 -----K-----VFGVVFRTPPKDSTGIPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKD 128 (995)
T ss_dssp -----E-----EEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCSSCHHHHHHHHCCEEEECCEECSSEEEEEEEESSHHH
T ss_pred -----C-----EEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEEEECCCHHH
T ss_conf -----1-----799996789869987689999997178878998467999997551887420677983599984488899
Q ss_pred HHHHHHHHHHHCCCCCC--CHHHHHHH---------------HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999951107899--92679999---------------98999999861199399999999840799999986665
Q 001753 171 LKGALMRFSQFFISPLM--KVEAMERE---------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFW 233 (1018)
Q Consensus 171 l~~~L~~l~~~~~~P~~--~~~~~~~e---------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 233 (1018)
++.+|+++++++.+|.| +++.|++| +++|.+|++.+.++|.+++++.+...+|++|||+++++
T Consensus 129 ~~~~l~~~~d~~~~p~~~~~~~~~~~E~~~~e~~~~~~~~~~r~vV~~E~~~~~~~p~~~~~~~~~~~~~~~~py~~~~~ 208 (995)
T 2fge_A 129 FYNLVDVYLDAVFFPKCVDDAHTFQQEGWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYGVDSG 208 (995)
T ss_dssp HHHHHHHHHHHHHSBGGGTSSHHHHHHTCEEECSCTTSCCEEECHHHHHHHHHTTSHHHHHHHHHHHHHCTTSGGGSCTT
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999999758787799899987666640456554321223199998750488899999999997189998877799
Q ss_pred CCHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCE
Q ss_conf 7433010042059228999999998217888719999849988899999997624345--89888987654443344540
Q 001753 234 GNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVR--KGPQIKPQFTVEGTIWKACK 311 (1018)
Q Consensus 234 G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~--~~~~~~~~~~~~~~~~~~~~ 311 (1018)
|++++|.+ +++++|++||++||+|+||+|+|+||+++++++++|+++|+.|| ++..+.+.. ..+++....
T Consensus 209 G~~~~i~~------~t~~~l~~f~~~~Y~p~n~~l~v~Gd~d~~~~~~~i~~~f~~~~~~~~~~~~~~~--~~~~~~~~~ 280 (995)
T 2fge_A 209 GDPKDIPN------LTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRVLSEYLDMFEASPSPNSSKIK--FQKLFSEPV 280 (995)
T ss_dssp CCTTTGGG------CCHHHHHHHHHHHSSGGGEEEEEEESSCHHHHHHHHHHHHTTCCCCSHHHHSCCC--CCCCCSSCE
T ss_pred CCHHHHHH------CCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf 99676321------5899999999981884216999986999999999999998517754567776657--777888870
Q ss_pred ----EEEE---EECCCCCEEEEEEECCCCH-HHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCC-CCCCCCCCC
Q ss_conf ----8999---8626664799999658960-433039099999972389998189999856753313022-267667765
Q 001753 312 ----LFRL---EAVKDVHILDLTWTLPCLH-QEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAG-VGDEGMHRS 382 (1018)
Q Consensus 312 ----~~~~---~~~~~~~~v~i~~~~p~~~-~~~~~~~~~ll~~iLg~~~~~~L~~~Lr~~glay~v~~~-~~~~~~~~~ 382 (1018)
.+.+ .+..+++.+.++|+.|... +..+..++.+++.+||++..++|++.||++||+|+++++ +.. ...
T Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~vl~~~Lg~~~~S~L~~~l~e~gl~~~~~~~~~~~-~~~-- 357 (995)
T 2fge_A 281 RLVEKYPAGRDGDLKKKHMLCVNWLLSEKPLDLQTQLALGFLDHLMLGTPASPLRKILLESGLGEALVSSGLSD-ELL-- 357 (995)
T ss_dssp EEEEEEECCSSSCGGGCEEEEEEEECCSSCCCHHHHHHHHHHHHHHHSSTTSHHHHHHHHTTSCSEECSCEEEC-SSS--
T ss_pred EEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCC-CCC--
T ss_conf 58886056778876676089999976887679889899999999976799878999998638875426515356-666--
Q ss_pred CCCEEEEEEE-EECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC-CCCH--HHHHHHHHHCCC
Q ss_conf 4310799999-90932363099999999999999996299247999999863034114668-9907--999999985579
Q 001753 383 SIAYIFVMSI-HLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEE-QPQD--DYAAELAGNLLI 458 (1018)
Q Consensus 383 ~~~~~~~i~~-~~~~~g~~~~~~~~~~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~-~~~~--~~~~~l~~~~~~ 458 (1018)
.|.|.|.+ .+.+ ++++++++.++++|++++++|+++++++++++.+...+..... +.+. .++..++..+..
T Consensus 358 --~~~f~i~~~~~~~---~~~~~~~~~i~~~l~~l~~~g~~~~el~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (995)
T 2fge_A 358 --QPQFGIGLKGVSE---ENVQKVEELIMDTLKKLAEEGFDNDAVEASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIY 432 (995)
T ss_dssp --SCEEEEEEEEECG---GGHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCTTSCHHHHHHHHHHHHHTT
T ss_pred --CEEEEEEEEECCH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
T ss_conf --7079999994888---78999999999999999873989999999999999997741578896179999999998766
Q ss_pred -CCCCCCCCCCCCCCCCCH----H----HHHHHHHH-CCCC-CEEEEEEECCCCC-CCCCCCCCEECCEEEEECCCHHH-
Q ss_conf -995442223533557989----9----99999840-2968-6199998089777-77763033120200000389268-
Q 001753 459 -YPAEHVIYGEYMYEVWDE----E----MIKHLLGF-FMPE-NMRIDVVSKSFAK-SQDFHYEPWFGSRYTEEDISPSL- 525 (1018)
Q Consensus 459 -~~~~~~~~~~~~i~~~t~----e----~i~~~~~~-l~~~-~~~i~~~~p~~~~-~~~~~~~~~~~~~y~~~~i~~~~- 525 (1018)
.++.........++.+++ + +|++++++ +.++ +..+++++|+... ......++|+...|. ..+..+.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~e~~~l~~~~-~~~~~~~~ 511 (995)
T 2fge_A 433 DMDPFEPLKYTEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVK-AAMTEEDL 511 (995)
T ss_dssp TSCSSGGGCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTTCCCEEEEEEEEETTHHHHHHHHHHHHHHHHH-HTSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-HHCCHHHH
T ss_conf 99967876459999999987507860799999999981579945899998380289999999999999998-73899999
Q ss_pred ---------HHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEE
Q ss_conf ---------98424999999866699999899988310015778897788998486316982799831797789707999
Q 001753 526 ---------MELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTY 596 (1018)
Q Consensus 526 ---------~~~~~~~~~~~~~~~lP~~n~~ip~~~~l~~~~~~~~~~~~~~p~~i~~~~g~~v~~~~~~~f~~Pk~~i~ 596 (1018)
++.|+.... +. +...++|... +.+..... ...|..+...+|++||++++ +..|.+.+.
T Consensus 512 ~~~~~~~~~l~~~~~~~~-~~-----~~~~~~p~~~-~~~i~~~~----~~~~~~~~~~nG~~v~~~~~--~~~~~v~~~ 578 (995)
T 2fge_A 512 AELARATEELKLKQETPD-PP-----EALRCVPSLN-LGDIPKEP----TYVPTEVGDINGVKVLRHDL--FTNDIIYTE 578 (995)
T ss_dssp HHHHHHHHHHHHHHTSCC-CH-----HHHTTSCCCC-GGGSCSSC----CCCCCEEEESSSSEEEEEEC--CCSSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCC-CH-----HHHHHCCCCC-HHHCCCCC----CCCCCEEEECCCCEEEEEEC--CCCCEEEEE
T ss_conf 999999999999855899-86-----7887447799-76667667----87884356408924999866--989869999
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHH-HHHHHH-------HHHHHCCCEE-EE--EEEC-----CEEEEEEEECCCCHH
Q ss_conf 999718997799999999999999999-997885-------7763338289-99--8717-----616999960499889
Q 001753 597 FRINLKGGYDNVKNCILTELFIHLLKD-ELNEII-------YQASVAKLET-SV--SIFS-----DKLELKVYGFNDKLP 660 (1018)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~-------~~~~~~g~~~-~~--~~~~-----~~~~l~~~g~s~~l~ 660 (1018)
+.+.. ...+.+...+..+++.++.. ....+. .....+|+++ ++ +.+. .++.+++++++++++
T Consensus 579 ~~~~~--~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~ggl~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~ 656 (995)
T 2fge_A 579 VVFDI--GSLKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISVYPLTSSVRGKDEPCSKIIVRGKSMAGRAD 656 (995)
T ss_dssp EEEEC--TTSCTTTGGGHHHHHHHHHHSCCSSSCHHHHHHHHHHHSSEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHH
T ss_pred EEEEC--CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEEEHHHHH
T ss_conf 99617--8899788343799999998489988889999999997317648411454667654556269999998364199
Q ss_pred HHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCC--------HHHHH--------H
Q ss_conf 999999999840799988-999999999999983214-91458999999850489999--------98999--------8
Q 001753 661 VLLSKILAIAKSFLPSDD-RFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYD--------VDEKL--------S 722 (1018)
Q Consensus 661 ~~l~~l~~~l~~~~~~~~-~f~~~k~~~~~~l~~~~~-~p~~~a~~~~~~ll~~~~~~--------~~~~~--------~ 722 (1018)
.+++++.+.+.+|.|+++ +|+++|++++.++++... +|..+|...+..++.+.++. ....+ +
T Consensus 657 ~~l~ll~e~l~~p~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~gl~~~~~~~~l~~~~~e 736 (995)
T 2fge_A 657 DLFNLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDE 736 (995)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 99999999997388891899999999999878875442699999999987379468999997359999999999986541
Q ss_pred HHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCH-HHHHHHHHHHHHHH-CCCCCCCCCCCCCEEEECCCCCEEEEEECCC
Q ss_conf 730599999999999998501157887338999-99999999999461-5899992223554068869998289974358
Q 001753 723 ILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQ-EEAIHISNIFKSIF-SVQPLPIEMRHQECVICLPSGANLVRNVSVK 800 (1018)
Q Consensus 723 ~l~~it~edl~~~~~~~~~~~~~~~~i~Gni~~-~~a~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1018)
.++.+ .+++++|++++|.+.+++++|+||++. +++.+++..+++.+ +....+.. + ...+.+.... . ..
T Consensus 737 ~~~~i-~~~L~~~~~~~~~~~~~~~~v~Gd~~~~~~~~~~~~~~~~~l~p~~~~~~~--~----~~~~~~~~~~-~--~~ 806 (995)
T 2fge_A 737 DWEGI-SSSLEEIRRSLLARNGCIVNMTADGKSLTNVEKSVAKFLDLLPENPSGGLV--T----WDGRLPLRNE-A--IV 806 (995)
T ss_dssp CHHHH-HHHHHHHHHHHCCSTTCEEEEEECHHHHHHHHHHHHHHHHTSCSSCSSCSC--C----CCCCCCCCCE-E--EE
T ss_pred CHHHH-HHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCC--C----CCCCCCCCCE-E--EE
T ss_conf 89999-999999999972868848999948899988999999999852756777777--6----5556776544-8--99
Q ss_pred CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC-HHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCH
Q ss_conf 97886727899998223558562899999999999851-34468742001342599943455378336999996899994
Q 001753 801 NKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNP 879 (1018)
Q Consensus 801 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ll~~~l~-s~lf~~LRek~~LgY~v~a~~~~~~~~~~~~~~v~s~~~~~ 879 (1018)
.+...+.+... ... ...+.++.+++.+++++|+ ++||++||+ +|++|+++|++.. .|..+. |+...+ +
T Consensus 807 ~~~~v~~~~~~-~~~----~~~~~~d~~al~vl~~iLg~~~L~~~iRe-~g~aYg~~s~~~~-~G~~~~-~~s~~d---p 875 (995)
T 2fge_A 807 IPTQVNYVGKA-GNI----YSTGYELDGSAYVISKHISNTWLWDRVRV-SGGAYGGFCDFDS-HSGVFS-YLSYRD---P 875 (995)
T ss_dssp CSCSSBEEEEE-EEG----GGGTCCCCTHHHHHHHHHHHTHHHHHTTT-TTCCSEEEEEEET-TTTEEE-EEEESB---S
T ss_pred ECCCEEEEEEE-CCC----CCCCCCCCHHHHHHHHHHCCCCCHHHHHH-CCCCCCCCEEECC-CCCEEE-EEEECC---C
T ss_conf 55741899974-477----78898664999999999777702788631-4877221317179-956899-999728---9
Q ss_pred HHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHH
Q ss_conf 679999999999999997-0799899999999999987089999789999989998328888885189999981599999
Q 001753 880 IYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKND 958 (1018)
Q Consensus 880 ~~l~~~i~~~l~~~~~~~-~~ite~el~~~K~~li~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vT~ed 958 (1018)
.+..+++.|...+..+. .++|++||+++|.++++++. .+.++...+.++|..+..+ ..+++.+++++.|.+||++|
T Consensus 876 -~~~~~~~~~~~~~~~l~~~~~te~el~~ak~~li~~~~-~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~i~~vT~ed 952 (995)
T 2fge_A 876 -NLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVD-SYQLPDAKGYSSLLRHLLG-VTDEERQRKREEILTTSLKD 952 (995)
T ss_dssp -CSHHHHHHHHTHHHHHHTCCCCHHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHTCCHHH
T ss_pred -CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCHHH
T ss_conf -98999999999999996299899999999999987336-8889899999999999749-59999999999998299999
Q ss_pred HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHH
Q ss_conf 999999861358998557999995488893001
Q 001753 959 VISWYKTYLQQWSPKCRRLAVRVWGCNTNIKES 991 (1018)
Q Consensus 959 i~~~~~k~l~~~~~~~~~l~~~v~G~~~~~~~~ 991 (1018)
|++++++|+.+- .+.+++|+|+.+.+.+.
T Consensus 953 v~~~a~~~~~~~----~~~~~~vvG~~~~i~~~ 981 (995)
T 2fge_A 953 FKDFAQAIDVVR----DKGVAVAVASAEDIDAA 981 (995)
T ss_dssp HHHHHHHHHHHH----HHCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHH----CCCCEEEECCHHHHHHH
T ss_conf 999999998653----36988998899999762
No 4
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=1.00 E-value=1 Score=657.01 Aligned_cols=873 Identities=12% Similarity=0.077 Sum_probs=604.8
Q ss_pred CCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 36978646621789368988999967999977775433589765543446755665335543344440112101456555
Q 001753 15 IKSPNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFS 94 (1018)
Q Consensus 15 ~~~~~~~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (1018)
..+..+-+.|++..|+||++|++++++.. +
T Consensus 78 ~~p~~~~~~~~~~~l~nGl~vl~i~~~~~--------------~------------------------------------ 107 (1193)
T 3s5m_A 78 YNEEFKMTYTVYQHKKAKTQVISLGTNDP--------------L------------------------------------ 107 (1193)
T ss_dssp EETTTTEEEEEEEETTTCCEEEEEEECCT--------------T------------------------------------
T ss_pred CCCCCCCCCEEEEECCCCCEEEEEECCCC--------------C------------------------------------
T ss_conf 58876665269999799988999998998--------------7------------------------------------
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH--CCCCCEEEECCCCEEEEEEECH-HHH
Q ss_conf 3450279999177788899999982499987610587679990079999995--3996203428982489998291-009
Q 001753 95 QTKKAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSK--HGGSSNAYTETEHTCYHFEIKR-EFL 171 (1018)
Q Consensus 95 ~~~~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~--~g~~~na~t~~~~t~~~~~~~~-~~l 171 (1018)
.+. .++.+|+..+|.+..|+||++|||+|+||++||.. ++...+.. .|+.+||+|+.|+|+|++++++ ++|
T Consensus 108 ---~~~--~~f~vg~~tep~~~~GvAH~lEHmlf~GS~k~p~~-e~~~~l~~~slG~~lNA~T~~D~T~Y~~~~~~~~~l 181 (1193)
T 3s5m_A 108 ---DVE--QAFAFYVKTLTHSGKGIPHILEHSVLSGSKNYNYK-NSIGLLEKGTLHTHLNAYTFNDRTVYMAGSMNNKDF 181 (1193)
T ss_dssp ---CCC--EEEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCCT-THHHHHHHSCCEEEEEEEECSSEEEEEEEESSHHHH
T ss_pred ---EEE--EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHCCCCEEEEEECCCEEEEEEEECCHHHH
T ss_conf ---078--99999978999997119999999983799898856-699999975448248768768759999994578889
Q ss_pred HHHHHHHHHHCCCCCCCHHH--HHHH-----------------------------HHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99999999511078999267--9999-----------------------------9899999986119939999999984
Q 001753 172 KGALMRFSQFFISPLMKVEA--MERE-----------------------------VLAVDSEFNQALQNDACRLQQLQCH 220 (1018)
Q Consensus 172 ~~~L~~l~~~~~~P~~~~~~--~~~e-----------------------------~~~v~~E~~~~~~~~~~~~~~~~~~ 220 (1018)
+.+|++++|++++|.|++++ |.+| +++|.+|++...++|..++++.+..
T Consensus 182 ~~~L~l~~D~v~~P~l~~~~~~F~qE~~~~E~e~~~~~Er~~~~~~~~~~~~l~~k~vV~~E~k~~~~~p~~~~~~~l~~ 261 (1193)
T 3s5m_A 182 FNIMGVYMDSVFQPNVLENKYIFETEGWTYEVEKLKEDEKGKAEIPQMKDYKVSFNGIVYNEMKGALSSPLEDLYHEEMK 261 (1193)
T ss_dssp HHHHHHHHHHHHSBGGGTCHHHHHHHTCEEEEEECCTTTTTCTTSCEETTEEEEEECHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999998587876321102245666543111001101222222221004589999999997558999999999999
Q ss_pred HCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC---
Q ss_conf 07999999866657433010042059228999999998217888719999849988899999997624345898889---
Q 001753 221 TSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK--- 297 (1018)
Q Consensus 221 ~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~--- 297 (1018)
.+|++|||+++++|++++|.+ +++++|++||++||+|+||+|+++||++++++.++++++|+.|+.+..+.
T Consensus 262 ~lf~~hpY~~~~~G~~e~I~~------lt~edl~~F~~~~Y~P~Na~l~v~Gdid~~~~~~~v~~~f~~~~~~~~~~~~~ 335 (1193)
T 3s5m_A 262 YMFPDNVHSNNSGGDPKEITN------LTYEEFKEFYYKNYNPKKVKVFFFSKNNPTELLNFVDQYLGQLDYSKYRDDAV 335 (1193)
T ss_dssp HHCTTSGGGSCTTCCHHHHTT------CCHHHHHHHHHHHSCTTTCEEEEEESSCTHHHHHHHHHHHTTCCGGGCCCCCC
T ss_pred HHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 857999998899999999851------89999999999860956669999926889999999999860588777776666
Q ss_pred CCCCCCCCCCCCCEEEEEE----ECCCCCEEEEEEECCCC----HH-----------------------------HHHCC
Q ss_conf 8765444334454089998----62666479999965896----04-----------------------------33039
Q 001753 298 PQFTVEGTIWKACKLFRLE----AVKDVHILDLTWTLPCL----HQ-----------------------------EYLKK 340 (1018)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~----~~~~~~~v~i~~~~p~~----~~-----------------------------~~~~~ 340 (1018)
.... ..+++...+.+... +...+..+.++|++|.. .+ ..+..
T Consensus 336 ~~~~-~~~~~~~~~~v~~~~~~~~~~~q~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~d~~ 414 (1193)
T 3s5m_A 336 ESVE-YQTYKKGPFYIKKKYGDHSEEKENLVSVAWLLNPKVDKTNNHNNNHSNNQSSENNGYSNGSHSSDLSLENPTDYF 414 (1193)
T ss_dssp CCCC-CCBCCCCCEEEEEEEECCCSSCCEEEEEEEESSCBCC----------------------CCCCSTTCCCSHHHHH
T ss_pred CCCC-CCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 6667-778778886999946899986513899999826754444453223443100011111233211122456862799
Q ss_pred CHHHHHHHHCCCCCCCHHHHHHHCCCCCEEC-CCCCCCCCCCCCCCEEEEEEEEECHHH------HHHH-HHHHHHHHHH
Q ss_conf 0999999723899981899998567533130-222676677654310799999909323------6309-9999999999
Q 001753 341 SEDYLAHLLGHEGRGSLHSFLKGRGWATSIS-AGVGDEGMHRSSIAYIFVMSIHLTDSG------LEKI-FDIIGFVYQY 412 (1018)
Q Consensus 341 ~~~ll~~iLg~~~~~~L~~~Lr~~glay~v~-~~~~~~~~~~~~~~~~~~i~~~~~~~g------~~~~-~~~~~~i~~~ 412 (1018)
++.+++++|||+..|+|++.||++||+|+++ +++.... ..+.|.|.+...+.+ .+++ +++.+.|.++
T Consensus 415 al~vL~~iLggg~sSrL~~~L~e~gLa~~v~~~~~~~~~-----~~~~f~i~~~g~~~~~~~~~~~~~~~~~~~~~I~~~ 489 (1193)
T 3s5m_A 415 VLLIINNLLIHTPESVLYKALTDCGLGNNVIDRGLNDSL-----VQYIFSIGLKGIKRNNEKIKNFDKVHYEVEDVIMNA 489 (1193)
T ss_dssp HHHHHHHHHHSSTTSHHHHHHHHHCSCSEEEEEEEECSS-----SSCEEEEEEEEECTTCTTCSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCC-----CCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 999999997799987799999966980354665456556-----786899999657834314531024899999999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCH--HHHHHHHHHC-CCCCCCCCCCCCCCCCCCC------HHHHHHHH
Q ss_conf 9999962992479999998630341146689907--9999999855-7999544222353355798------99999998
Q 001753 413 IKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQD--DYAAELAGNL-LIYPAEHVIYGEYMYEVWD------EEMIKHLL 483 (1018)
Q Consensus 413 l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~--~~~~~l~~~~-~~~~~~~~~~~~~~i~~~t------~e~i~~~~ 483 (1018)
|++++++|+++++++++++.+...++.....++. .++..+...+ +..+|...+.....++.+. +.++++++
T Consensus 490 L~~l~~~gi~~~ele~a~~~le~~~re~~~~~~~gl~~~~~~~~~w~~~~dp~~~l~~~~~l~~l~~~~~~~~~~~~~li 569 (1193)
T 3s5m_A 490 LKKVVKEGFNKSAVEASINNIEFILKEANLKTSKSIDFVFEMTSKLNYNRDPLLIFEFEKYLNIVKNKIKNEPMYLEKFV 569 (1193)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTTCCTTTTTSHHHHHHHHHHHHHHSTTHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99998729899999999999999877513799709999999878878079989987789999999998610849999999
Q ss_pred HH-CCCC-CEEEEEEECCCC-CCCCCCCCCEECCEEEEECCCH----------HHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40-2968-619999808977-7777630331202000003892----------689842499999986669999989998
Q 001753 484 GF-FMPE-NMRIDVVSKSFA-KSQDFHYEPWFGSRYTEEDISP----------SLMELWRNPPEIDVSLQLPSQNEFIPT 550 (1018)
Q Consensus 484 ~~-l~~~-~~~i~~~~p~~~-~~~~~~~~~~~~~~y~~~~i~~----------~~~~~~~~~~~~~~~~~lP~~n~~ip~ 550 (1018)
++ |..+ +..++++.|+.. ..+....++- ...-....+++ ..++.|+.....+..+. ++|+
T Consensus 570 ~~yll~n~~~~~~~~~P~~~~~~~~~~~e~~-~L~~~~~~ls~~~~~~i~~~~~~L~~~q~~~~~~e~l~------~lP~ 642 (1193)
T 3s5m_A 570 EKHFINNAHRSVILLEGDENYAQEQENLEKQ-ELKKRIENFNEQEKEQVIKNFEELSKYKNAEESPEHLN------KFPI 642 (1193)
T ss_dssp HHHTTTCCCEEEEEEEEESSHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHT------TSCC
T ss_pred HHHHCCCCCEEEEEEECCCCHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH------HCCC
T ss_conf 9983349963899997288777899999999-99999863899999999999999999873779754697------4784
Q ss_pred CCEEECCCCCCCCCCCCCCEEE----------------------------------------------------------
Q ss_conf 8310015778897788998486----------------------------------------------------------
Q 001753 551 DFSIRANDISNDLVTVTSPTCI---------------------------------------------------------- 572 (1018)
Q Consensus 551 ~~~l~~~~~~~~~~~~~~p~~i---------------------------------------------------------- 572 (1018)
+++.+...... ..|...
T Consensus 643 -l~~~Di~~~~~----~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1193)
T 3s5m_A 643 -ISISDLNKKTL----EVPVNVYFTNINENNNIMETYNKLKTNEHMLKDNMDVFLKKYVLKNDKHNTNNNNNNNNNMDYS 717 (1193)
T ss_dssp -CCGGGSCSSCC----CCCCEEEEECTTTCSCHHHHHHHHHTCHHHHHHHHHHHHHHHTTC-------------------
T ss_pred -CCHHHCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -70987688766----6763011222221122100011111111112221100000000122222223222223322222
Q ss_pred ----ECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH------H--HHHHHHHCCCEEE
Q ss_conf ----316982799831797789707999999718997799999999999999999997------8--8577633382899
Q 001753 573 ----IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN------E--IIYQASVAKLETS 640 (1018)
Q Consensus 573 ----~~~~g~~v~~~~~~~f~~Pk~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~--~~~~~~~~g~~~~ 640 (1018)
...+|+++|+++.++ ++.+|+++.++....+.+...+..||+.++....+ + .......+|++++
T Consensus 718 ~~~~~~~~gv~v~~~~~~T----NGIvY~~l~fdl~~l~~e~l~yl~Lf~~~L~~lGT~~~sy~el~~~i~~~tGGis~s 793 (1193)
T 3s5m_A 718 FTETKYEGNVPILVYEMPT----TGIVYLQFVFSLDHLTVDELAYLNLFKTLILENKTNKRSSEDFVILREKNIGSMSAN 793 (1193)
T ss_dssp --CCTTTTCEEEEEEECCC----TTEEEEEEEEECTTCCHHHHTTHHHHHHHTTTCCBSSSCHHHHHHHHHHHCSEEEEE
T ss_pred CCCCCCCCCEEEEEEECCC----CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 2111344983799998799----986999999879999978875699999999847999999999999999858855887
Q ss_pred EEEE--------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHCCCC-HHHHHHH
Q ss_conf 9871--------------7616999960499889999999999840799988-9999999999999832149-1458999
Q 001753 641 VSIF--------------SDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDD-RFKVIKEDVVRTLKNTNMK-PLSHSSY 704 (1018)
Q Consensus 641 ~~~~--------------~~~~~l~~~g~s~~l~~~l~~l~~~l~~~~~~~~-~f~~~k~~~~~~l~~~~~~-p~~~a~~ 704 (1018)
+++. ...+.++..+++++++++++++.+++.++.|++. ++..+..+.+..+.+...+ ++.+|..
T Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~vs~kaL~~n~~~~~~Ll~eiL~~~~F~d~eRlk~ll~~~ks~le~~i~~sGH~~A~~ 873 (1193)
T 3s5m_A 794 VALYSKDDHLNVTDKYNAQALFNLEMHVLSHKCNDALNIALEAVKESDFSNKKKVIDILKRKINGMKTTFSEKGYAILMK 873 (1193)
T ss_dssp EEEECCCBTTBCCCTTCCEEEEEEEEEEEGGGHHHHHHHHHHHHHSBCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCEEEEEEEEHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 66503655445566556564699999974426999999999998579999689999999999998873142466899999
Q ss_pred HHHHHHCCCCCC--------HHHHHHH--------HCCCCHHHHHHHHHHHHHHHCEEEEEECCCCH-HHHHHHHHHHHH
Q ss_conf 999850489999--------9899987--------30599999999999998501157887338999-999999999994
Q 001753 705 LRLQVLCQSFYD--------VDEKLSI--------LHGLSLADLMAFIPELRSQLYIEGLCHGNLSQ-EEAIHISNIFKS 767 (1018)
Q Consensus 705 ~~~~ll~~~~~~--------~~~~~~~--------l~~it~edl~~~~~~~~~~~~~~~~i~Gni~~-~~a~~l~~~~~~ 767 (1018)
++...+.+.++- ....+.. .+.+ .++|.++++++|++.++.+.++|+.+. +++.+.+..+++
T Consensus 874 ra~s~~s~~~~~~e~~~Gl~~~~fl~~l~~~~e~~~~~l-~~~L~~i~~~if~~~nl~vsvtg~~~~~~~~~~~l~~~l~ 952 (1193)
T 3s5m_A 874 YVKAHLNSKHYAHNIIYGYENYLKLQEQLELAENDFKTL-ENILVRIRNKIFNKKNLMVSVTSDYGALKHLFVNSNESLK 952 (1193)
T ss_dssp HTTTTTCHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHSCSTTEEEEEEECGGGTHHHHTTTHHHHH
T ss_pred HHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 999864750223442078579999999998667559999-9999999999818788399999476569999999999997
Q ss_pred HHCC----CCC----------CC--C-C---CCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCHHHH
Q ss_conf 6158----999----------92--2-2---3554068869998289974358978867278999982235585628999
Q 001753 768 IFSV----QPL----------PI--E-M---RHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLK 827 (1018)
Q Consensus 768 ~~~~----~~~----------~~--~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 827 (1018)
.++. ... +. . . .........+...... ...+..++.+...+. . ....++++
T Consensus 953 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~p~~v~yv~~~~~-~----~~~~~~d~ 1023 (1193)
T 3s5m_A 953 NLVSYFEENDKYINDMQNKVNDPTVMGWNEEIKSKKLFDEEKVKKEF----FVLPTFVNSVSMSGI-L----FKPGEYLD 1023 (1193)
T ss_dssp HHHHHHHHGGGGSCCCCSSSCCCCCCCHHHHHHHTTCCCTTCCEEEE----EECCCSSBEEEEEEE-C----SCTTCBCC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE----EECCCCCEEEEEEEC-C----CCCCCCCH
T ss_conf 51210255664322222334454433222222332223555555506----742786469999724-7----77798760
Q ss_pred HHHHHHHHHHC-HHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 99999999851-34468742001342599943455378336999996899994679999999999999997079989999
Q 001753 828 ALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFE 906 (1018)
Q Consensus 828 ~~~~ll~~~l~-s~lf~~LRek~~LgY~v~a~~~~~~~~~~~~~~v~s~~~~~~~l~~~i~~~l~~~~~~~~~ite~el~ 906 (1018)
+++.+++++|+ ++||++||+|.| +|+++|++. .. +.+.|+...+ ..+....+.+.+.+..+....+++|++||+
T Consensus 1024 ~al~Vl~~iLg~~~L~~eIREkgG-AYg~~s~~~-~~--G~f~~~syrd-p~~~~tl~~~~~~~~~l~~~~~~~teeEL~ 1098 (1193)
T 3s5m_A 1024 PSFTVIVAALKNSYLWDTVRGLNG-AYGVFADIE-YD--GSVVFLSARD-PNLEKTLATFRESAKGLRKMADTMTENDLL 1098 (1193)
T ss_dssp THHHHHHHHHHHTHHHHHHTTTTC-CSEEEEEEC-TT--SEEEEEEESB-SCSHHHHHHHHTHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHCCC-EEEEEEECC-CC--CCEEEEEEEC-CCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 999999999782477999976187-268877616-78--8679999807-987999999999999999635898999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCC---CCCCCCEEEEEEEC
Q ss_conf 999999998708999978999998999832888888518999998159999999999986135---89985579999954
Q 001753 907 NYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQ---WSPKCRRLAVRVWG 983 (1018)
Q Consensus 907 ~~K~~li~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~vT~edi~~~~~k~l~~---~~~~~~~l~~~v~G 983 (1018)
++|.++++++. .+.++...+..++..... +.+.++.+++++.|.+||++||++++++|+.+ + ...++|+|
T Consensus 1099 ~ak~~~~~~~d-~p~~p~~~a~~~~~~~~~-Gl~~d~~~~~~~~I~aVT~edv~~vA~~~~~~l~~~-----~~~~vvvG 1171 (1193)
T 3s5m_A 1099 RYIINTIGTID-KPRRGIELSKLSFLRLIS-NESEQDRVEFRKRIMNTKKEDFYKFADLLESKVNEF-----EKNIVIIT 1171 (1193)
T ss_dssp HHHHHHHHHHS-CCCCTHHHHHHHHHHHHT-TCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHH-----TTEEEEEE
T ss_pred HHHHHHHHCCC-CCCCHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC-----CCEEEEEC
T ss_conf 99999983666-668969999999999981-959999999999998099999999999985132136-----73699985
Q ss_pred CCCCCCHHHH
Q ss_conf 8889300100
Q 001753 984 CNTNIKESEK 993 (1018)
Q Consensus 984 ~~~~~~~~~~ 993 (1018)
+...+.+...
T Consensus 1172 ~~~~i~~~l~ 1181 (1193)
T 3s5m_A 1172 TKEKANEYIA 1181 (1193)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 8888535776
No 5
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=1.00 E-value=1 Score=457.45 Aligned_cols=400 Identities=20% Similarity=0.206 Sum_probs=349.0
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEE
Q ss_conf 21789368988999967999977775433589765543446755665335543344440112101456555345027999
Q 001753 24 YRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAAM 103 (1018)
Q Consensus 24 ~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 103 (1018)
++..+|+||++|++++++.. + .+++++
T Consensus 2 ~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~~~~~l 28 (406)
T 3eoq_A 2 FREAELRNGLRVIAEVVPGA--------------R---------------------------------------SVALGY 28 (406)
T ss_dssp EEEEECTTSCEEEEEECTTC--------------S---------------------------------------CEEEEE
T ss_pred CEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEEEE
T ss_conf 64698689998999987999--------------7---------------------------------------699999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHCC
Q ss_conf 91777888999999824999876105876799900799999953996203428982489998291009999999995110
Q 001753 104 CVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFFI 183 (1018)
Q Consensus 104 ~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~~~ 183 (1018)
++++|+.+||.+..|+|||+|||+|+||++|+. .++.+.++.+|+.+||+|+.++|.|++++++++++.+|+++++++
T Consensus 29 ~~~~Gs~~e~~~~~G~ah~lehmlf~Gt~~~~~-~~~~~~l~~~G~~~na~t~~d~t~y~~~~~~~~l~~~l~ll~d~~- 106 (406)
T 3eoq_A 29 FVKTGARDETKEESGVSHFLEHMVFKGPEDMDA-LAVNRAFDRMGAQYNAFTSEEATVYYGAVLPEFAYDLLGLFAKLL- 106 (406)
T ss_dssp EESCSGGGSCGGGTTHHHHHHHHHTTCCTTCCH-HHHHHHHHHTTCEEEEEECSSCEEEEEEECGGGHHHHHHHHHHHT-
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHHCCCCCCEECCCEEEEEEEECHHHHHHHHHHHHHHH-
T ss_conf 985425788999888999999987179999998-999999998488735264477489999955788999999999985-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 78999267999998999999861199399999999840799999986665743301004205922899999999821788
Q 001753 184 SPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQG 263 (1018)
Q Consensus 184 ~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~p 263 (1018)
+|.|+++.|++|++++.+|++...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++||+|
T Consensus 107 ~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~------~t~~~l~~f~~~~y~p 180 (406)
T 3eoq_A 107 RPALREEDFQTEKLVILEEIARYQDRPGFMAYEWARARFFQGHPLGNSVLGTRESITA------LTREGMAAYHRRRYLP 180 (406)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCGGGCCSSCCHHHHHH------CCHHHHHHHHHHHCCG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHHCCC
T ss_conf 6899989999999999999987429978999999999843899998888689999963------8999999999984886
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC-CCCEEEEEEECCCCHHHHHCCCH
Q ss_conf 87199998499888999999976243458988898765444334454089998626-66479999965896043303909
Q 001753 264 GLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVK-DVHILDLTWTLPCLHQEYLKKSE 342 (1018)
Q Consensus 264 ~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~i~~~~p~~~~~~~~~~~ 342 (1018)
+||+|+|+||+++++++++++++|+.||.+..+.+ . + +....++.+.+.... +++.+.++|+.|...+. +..++
T Consensus 181 ~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~-d~~~l 255 (406)
T 3eoq_A 181 KNMVLAATGRVDFDRLLAEAERLTEAWPEGEAERA-Y--P-PLTPAFGVEERPYEKARALYLVALFPGVAYQEE-ARFPG 255 (406)
T ss_dssp GGEEEEEEESCCHHHHHHHHHHHHTTCCCCCCCCC-C--C-CCCCCCEEEEEECTTCSSEEEEEEEECCCTTCT-THHHH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC-C--C-CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCC-HHHHH
T ss_conf 67799998489999999999998357887888988-8--9-878888469983687350589999447998881-19999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999723899981899998567533130222676677654310799999909323630999999999999999962992
Q 001753 343 DYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQ 422 (1018)
Q Consensus 343 ~ll~~iLg~~~~~~L~~~Lr~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l~~~~i~ 422 (1018)
.+++.+|||+..++|+..||++||+|+++++.... . +.|.|.+++.+.+ ++++++++.+.++|++++++|++
T Consensus 256 ~vl~~iLgg~~~srL~~~lre~gl~y~~~s~~~~~-~----~~g~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~~~t 327 (406)
T 3eoq_A 256 QVLAHLLGEEGSGRLHFALVDKGLAEVASFGLEEA-D----RAGTFHAYVQADP---ARKGEVLAVLQEELDRLGREGVG 327 (406)
T ss_dssp HHHHHHHHCTTTSHHHHHTTTTTSEEEEEEEEEEC-S----SCEEEEEEEEECG---GGHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCC-C----CCEEEEEEEEECC---CHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999967996248899999759746999874056-7----8637999998473---32999999999999999857999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCEEEEEEECC
Q ss_conf 479999998630341146689907999999985579-995442223533557989999999840-29686199998089
Q 001753 423 KWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI-YPAEHVIYGEYMYEVWDEEMIKHLLGF-FMPENMRIDVVSKS 499 (1018)
Q Consensus 423 ~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~t~e~i~~~~~~-l~~~~~~i~~~~p~ 499 (1018)
+++++++|+.+...+..+.+ ++...+..++..... .++.........++++|+++|++++++ +.+++. ++++||.
T Consensus 328 ~~el~~ak~~l~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~l~~~~~-~~vvGp~ 404 (406)
T 3eoq_A 328 EEEVERAKTPLATGLVFAGE-TPMQRLFHLGMEYLYTGRYLSLEEVKARVQRVTSREVNALLERGFLEKGL-YYLVLPH 404 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHCCHHHHHHHHHTTTTTSCE-EEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCE-EEEECCC
T ss_conf 99999999999977877347-89999999999999669989999999999828999999999986585667-9997898
No 6
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=1.00 E-value=1 Score=456.71 Aligned_cols=412 Identities=13% Similarity=0.145 Sum_probs=355.1
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE
Q ss_conf 66217893689889999679999777754335897655434467556653355433444401121014565553450279
Q 001753 22 RLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAA 101 (1018)
Q Consensus 22 ~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1018)
..++.++|+||++|++++++.. + .+.+
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~v~~ 31 (445)
T 3ami_A 5 ASTFETTLPNGLKVVVREDHRA--------------P---------------------------------------TLVH 31 (445)
T ss_dssp GGEEEEECTTSCEEEEEECTTS--------------S---------------------------------------EEEE
T ss_pred CCCEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEE
T ss_conf 6717999799998999977999--------------8---------------------------------------6999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHH
Q ss_conf 99917778889999998249998761058767999007999999539962034289824899982910099999999951
Q 001753 102 AMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQF 181 (1018)
Q Consensus 102 ~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~ 181 (1018)
.+++++|+.+||.+..|+||++|||+|+||++|+. .++.+.++.+|+.+||+|+.++|.|++++++++++.+|++++++
T Consensus 32 ~~~~~~Gs~~e~~~~~Glah~lehmlf~Gt~~~~~-~~l~~~l~~~g~~~na~t~~d~t~y~~~~~~~~l~~~l~ll~d~ 110 (445)
T 3ami_A 32 MVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGP-GEFSKRVAAMGGRDNAFTTRDYTAYYQQVPSSRLSDVMGLEADR 110 (445)
T ss_dssp EEEESCCGGGCCTTCTTHHHHHHHHTTSCBSSSCT-THHHHHHHHTTCEEEEEECSSCEEEEEEEEGGGHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 99984556788988953899998701089988987-78999999829863301479857999978889999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHC
Q ss_conf 10789992679999989999998-61199399999999840799999986665743301004205922899999999821
Q 001753 182 FISPLMKVEAMEREVLAVDSEFN-QALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNY 260 (1018)
Q Consensus 182 ~~~P~~~~~~~~~e~~~v~~E~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~ 260 (1018)
+.+|.|++++|++|++++.+|++ ...++|..++.+.+...+|++|||+++.+|+.++|.+ ++.++|++||++|
T Consensus 111 ~~~p~f~~~~~~~e~~~v~~e~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~e~l~~------it~~~l~~f~~~~ 184 (445)
T 3ami_A 111 MANLVVDDELFKKEIQVIAEERRWRTDDKPRSKAYEALMAASYVAHPYRVPVIGWMNDIQN------MTAQDVRDWYKRW 184 (445)
T ss_dssp HHCBCCCHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHCSSSGGGSCTTCCHHHHHH------CCHHHHHHHHHHH
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHH
T ss_conf 6189999899999999999999854458847999999999860589877998889999865------7999999999971
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCC---CHHHH
Q ss_conf 788871999984998889999999762434589888987654443344540899986266647999996589---60433
Q 001753 261 YQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPC---LHQEY 337 (1018)
Q Consensus 261 y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~---~~~~~ 337 (1018)
|+|+||+|+|+||+++++++++++++|+.||.+..+.+... ..+.....+.+.+.....++.+.++|+.|. ..+..
T Consensus 185 y~p~n~~l~vvGd~d~~~~~~~v~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~ 263 (445)
T 3ami_A 185 YGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQ-GEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDLDKSR 263 (445)
T ss_dssp CSGGGEEEEEEESCCHHHHHHHHHHTGGGSCCCCCCCCCCC-CCCCCCSCEEEEEEEECSSCEEEEEEEECCCSSTTCCH
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCH
T ss_conf 88556699998289999999999998437988889987778-89887786589985687763799999768721256883
Q ss_pred HCCCHHHHHHHHCCCCCCCHHHHHH-HCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0390999999723899981899998-567533130222676677654310799999909323630999999999999999
Q 001753 338 LKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLL 416 (1018)
Q Consensus 338 ~~~~~~ll~~iLg~~~~~~L~~~Lr-~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l 416 (1018)
+..++.+++.+||++..++|+..|| ++|++|+++++......+ ..|.|.|++.+.+. .+++++++.+.++|+.+
T Consensus 264 ~~~~~~vl~~iLg~~~~srL~~~lre~~gl~y~v~~~~~~~~~~---~~g~~~i~~~~~~~--~~~~~~~~~i~~~l~~l 338 (445)
T 3ami_A 264 DAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLSRG---QQGLFILEGVPSKG--VTIAQLETDLRAQVRDI 338 (445)
T ss_dssp HHHHHHHHHHHHHSSTTCHHHHHTTTTSCCEEEEEEECCCCCSS---CCEEEEEEEEECTT--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC---CCCEEEEEEEECCC--CCHHHHHHHHHHHHHHH
T ss_conf 29999999999807723578999852588579998501233457---89759999997999--99999999999999999
Q ss_pred HHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCEEEE
Q ss_conf 9629924799999986303411466899079999999855799-95442223533557989999999840-296861999
Q 001753 417 RQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIY-PAEHVIYGEYMYEVWDEEMIKHLLGF-FMPENMRID 494 (1018)
Q Consensus 417 ~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~t~e~i~~~~~~-l~~~~~~i~ 494 (1018)
++.|+++++++++|+.+...+..+.+ ++..++..++..+..+ ++.........++++|+++|++++++ +.++++.++
T Consensus 339 ~~~g~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~l~~~~~~~~ 417 (445)
T 3ami_A 339 AAKGVTEAELSRVKSQMVAGKVYEQD-SLMGQATQIGGLEVLGLSWRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVA 417 (445)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHHHTTT-SHHHHHHHHHHHHTTTCCTTHHHHHHHHHHTCCHHHHHHHHHTTSCSTTEEEE
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 85398999999999999999999744-78999999999998179867899999999749999999999997185773999
Q ss_pred EEECCC
Q ss_conf 980897
Q 001753 495 VVSKSF 500 (1018)
Q Consensus 495 ~~~p~~ 500 (1018)
+++|..
T Consensus 418 ~~~p~~ 423 (445)
T 3ami_A 418 NLVPLP 423 (445)
T ss_dssp EEEEEC
T ss_pred EECCCC
T ss_conf 975676
No 7
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=1.00 E-value=1 Score=440.52 Aligned_cols=403 Identities=16% Similarity=0.180 Sum_probs=348.5
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEE
Q ss_conf 62178936898899996799997777543358976554344675566533554334444011210145655534502799
Q 001753 23 LYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAAA 102 (1018)
Q Consensus 23 ~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (1018)
.|+..+|+||++|++++++.. + .+++.
T Consensus 1 ~~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~~~~~ 27 (421)
T 3hdi_A 1 MINTMTLDNGVRIITEKMSTV--------------R---------------------------------------SVSIG 27 (421)
T ss_dssp -CEEEECTTSCEEEEEECTTC--------------S---------------------------------------EEEEE
T ss_pred CCEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEEE
T ss_conf 966798699988999987999--------------7---------------------------------------79999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHC
Q ss_conf 99177788899999982499987610587679990079999995399620342898248999829100999999999511
Q 001753 103 MCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQFF 182 (1018)
Q Consensus 103 l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~~ 182 (1018)
+++++|+.+||.+..|+|||+|||+|+||++++. .++.+.++.+||.+||+|+.++|.|++++++++++.+|+++++++
T Consensus 28 l~~~~Gs~~e~~~~~G~ah~leh~lf~gt~~~~~-~~~~~~l~~~G~~~na~t~~d~t~~~~~~~~~~l~~~l~ll~d~~ 106 (421)
T 3hdi_A 28 IWVGTGSRYESAEENGISHFLEHMFFKGTNTRSA-QEIAEFFDSIGGQVNAFTSKEYTCYYAKVLDDHAGQAIDTLSDMF 106 (421)
T ss_dssp EEESCCGGGCCGGGTTHHHHHHHHTTSBBSSSBH-HHHHHHHHTTTSCEEEEECSSCEEEEEEEEGGGHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHHCCCEEEEECCCEEEEEEEECHHHHHHHHHHHHHHH
T ss_conf 9982345788999886799999986279899999-999999998488120243565699999964877999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHCCC
Q ss_conf 07899926799999899999986119939999999984079999998666574330100420592289999999982178
Q 001753 183 ISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQ 262 (1018)
Q Consensus 183 ~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y~ 262 (1018)
.+|.|+++++++|++++.+|++...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++||+
T Consensus 107 ~~p~f~~~~~~~ek~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~------it~~~l~~f~~~~y~ 180 (421)
T 3hdi_A 107 FHSTFQKEELEKERKVVFEEIKMVDDTPDDIVHDLLSSATYGKHSLGYPILGTVETLNS------FNEGMLRHYMDRFYT 180 (421)
T ss_dssp HSBCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTSGGGSCTTCCHHHHHH------CCHHHHHHHHHHHSS
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHHCC
T ss_conf 68999989999999999999987568888999999999824899999988689899975------999999999998448
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHCCCH
Q ss_conf 88719999849988899999997624345898889876544433445408999862666479999965896043303909
Q 001753 263 GGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLKKSE 342 (1018)
Q Consensus 263 p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~~~~~~~~~ 342 (1018)
|+||+|+|+||++ ++++++++++|+.||.+..+.+ . ..|.. ........+..++..+.++|+.+...+ .+..++
T Consensus 181 p~n~~l~v~Gd~~-~~~~~~v~~~f~~~~~~~~~~~-~--~~~~~-~~~~~~~~~~~~q~~v~~~~~~~~~~~-~d~~~l 254 (421)
T 3hdi_A 181 GDYVVISVAGNVH-DELIDKIKETFSQVKPTTYNYQ-G--EKPMF-LPNRIVRKKETEQAHLCLGYPGLPIGD-KDVYAL 254 (421)
T ss_dssp TTTEEEEEEESCC-HHHHHHHHHHTTSSCCCCCCCC-C--CCCCC-CCCEEEEECCCSEEEEEEEEECCCTTC-TTHHHH
T ss_pred CCCEEEEEEECCC-HHHHHHHHHHHCCCCCCCCCCC-C--CCCCC-CCCEEEECCCCCCEEEEEEEECCCCCC-CHHHHH
T ss_conf 4667999980887-9999999998368888888878-8--98877-885388607888458999976699898-169999
Q ss_pred HHHHHHHCCCCCCCHHHHHH-HCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999723899981899998-56753313022267667765431079999990932363099999999999999996299
Q 001753 343 DYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSP 421 (1018)
Q Consensus 343 ~ll~~iLg~~~~~~L~~~Lr-~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~i~~~l~~l~~~~i 421 (1018)
.+++.+||++..++|++.|| ++|++|+++++.... . +.|.|.+++.+.+ ++++++++.+.++|+.++++++
T Consensus 255 ~vl~~iLgg~~~srL~~~lRe~~glay~~~s~~~~~-~----~~g~~~i~~~~~~---~~~~~~~~~i~~~l~~l~~~~~ 326 (421)
T 3hdi_A 255 VLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSF-R----DSGMLTIYAGTGH---DQLDDLVYSIQETTSALAEKGL 326 (421)
T ss_dssp HHHHHHHTSSSSSHHHHHHTTTTCCCSCEEEEEEEC-S----SCEEEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEECCC-C----CCCEEEEEEEECH---HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999679963279999987359779999751466-7----8836999998088---7899999999999999985799
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 247999999863034114668990799999998557-9995442223533557989999999840296861999980897
Q 001753 422 QKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLL-IYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSF 500 (1018)
Q Consensus 422 ~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~i~~~t~e~i~~~~~~l~~~~~~i~~~~p~~ 500 (1018)
++++++++|+.+...+....+ ++...+..++.... .............++++|++||+++++++.+++..++++||..
T Consensus 327 t~~el~~ak~~l~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~~~~~~~~~vvgp~~ 405 (421)
T 3hdi_A 327 TEKELENGKEQLKGSLMLSLE-STNSRMSRNGKNELLLKKHRSLDEMIEQINAVQKQDVSRLAKILLSASPSISLINANG 405 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHTSCCCCHHHHHHHHHHCCHHHHHHHHHHHTTSCCEEEEEESSC
T ss_pred CHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCHH
T ss_conf 999999999999999987068-9999999999999966998999999999970899999999999705275899987500
No 8
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=1.00 E-value=1 Score=426.70 Aligned_cols=411 Identities=13% Similarity=0.074 Sum_probs=344.7
Q ss_pred CCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 78646621789368988999967999977775433589765543446755665335543344440112101456555345
Q 001753 18 PNDKRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTK 97 (1018)
Q Consensus 18 ~~~~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (1018)
....+.++..+|+||++|++.+++. +
T Consensus 8 ~~~~~~~~~~~L~NGl~v~~~~~~~---------------~--------------------------------------- 33 (446)
T 1pp9_A 8 LQSVPETQVSQLDNGLRVASEQSSQ---------------P--------------------------------------- 33 (446)
T ss_dssp HTTSCCCEEEECTTCCEEEEEECSC---------------S---------------------------------------
T ss_pred CCCCCCCEEEECCCCCEEEEEECCC---------------C---------------------------------------
T ss_conf 1156674599999998899996799---------------8---------------------------------------
Q ss_pred CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHH
Q ss_conf 02799991777888999999824999876105876799900799999953996203428982489998291009999999
Q 001753 98 KAAAAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMR 177 (1018)
Q Consensus 98 ~~~~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~ 177 (1018)
.+.+.+++++|+.+||.+..|+|||+|||+|+||++|+. .++.+.++.+|+.+||+|+.++|.|++++++++++.+|++
T Consensus 34 ~~~~~l~~~~Gs~~e~~~~~Glahllehmlf~GT~~~~~-~~~~~~l~~~G~~~na~t~~d~t~~~~~~~~~~l~~~l~l 112 (446)
T 1pp9_A 34 TCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG-NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVEL 112 (446)
T ss_dssp EEEEEEEESCSGGGCCTTTTTHHHHHHHHTTSCBSSSTT-THHHHHHHHTTCEEEEEECSSCEEEEEEEEGGGHHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHCCCEEEEEECCCEEEEEEEECHHHHHHHHHH
T ss_conf 799999975304889999873899999975178999998-9999999970997999976876999999257889999999
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHH
Q ss_conf 99511078999267999998999999861199399999999840799999986665743301004205922899999999
Q 001753 178 FSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLY 257 (1018)
Q Consensus 178 l~~~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~ 257 (1018)
+++++.+|.|+++++++|++++.+|++...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||
T Consensus 113 l~d~~~~p~f~~~~~~~ek~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~------~~~~~l~~f~ 186 (446)
T 1pp9_A 113 LADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRK------LSRADLTEYL 186 (446)
T ss_dssp HHHHHHHBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHHHHHH------CCHHHHHHHH
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHH
T ss_conf 9999857999989999999999999986342888999999999862899999998588899974------7999999999
Q ss_pred HHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHH
Q ss_conf 82178887199998499888999999976243458988898765444334454089998626664799999658960433
Q 001753 258 MNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEY 337 (1018)
Q Consensus 258 ~~~y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~~~~ 337 (1018)
++||+|+||+|+++||+++++++++++++|+.||....+.....+..+....+......+..+++.+.++|+.+...+ .
T Consensus 187 ~~~y~p~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~ 265 (446)
T 1pp9_A 187 SRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPGWAH-P 265 (446)
T ss_dssp HHHCCGGGEEEEEEESCCHHHHHHHHHHHHTTSCSCCCSSCCCCCCCCCCCCEEEEEEETTSSSEEEEEEEEECCTTC-T
T ss_pred HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCC-C
T ss_conf 944678877999980899999999999982368888887766667788878965897058854058999973489999-5
Q ss_pred HCCCHHHHHHHHCC---------CCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf 03909999997238---------999818999985675331302226766776543107999999093236309999999
Q 001753 338 LKKSEDYLAHLLGH---------EGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGF 408 (1018)
Q Consensus 338 ~~~~~~ll~~iLg~---------~~~~~L~~~Lr~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~ 408 (1018)
+..++.+++.+||+ +..++|+..||++|++|+++++.... . +.|.|.+++.+.+ ++++++++.
T Consensus 266 d~~al~vl~~iLg~~~~~~~~g~~~~srL~~~lr~~glay~~~s~~~~~-~----~~g~~~i~~~~~~---~~~~~~~~~ 337 (446)
T 1pp9_A 266 DNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICY-A----DTGLLGAHFVCDH---MSIDDMMFV 337 (446)
T ss_dssp HHHHHHHHHHHHCEEETTCSCGGGCSSHHHHHHHHHTCCSEEEEEEEEC-S----SCEEEEEEEEECT---TSHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCC-C----CCEEEEEEEEECH---HHHHHHHHH
T ss_conf 0999999999819986457888987779999998649838998850567-7----8769999999778---779999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHH-C
Q ss_conf 999999999629924799999986303411466899079999999855-79995442223533557989999999840-2
Q 001753 409 VYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNL-LIYPAEHVIYGEYMYEVWDEEMIKHLLGF-F 486 (1018)
Q Consensus 409 i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~i~~~t~e~i~~~~~~-l 486 (1018)
+.++++.+++ ++++++++++|..+...+....+ ++...+..++..+ ....+.........+.++|+++|++++++ +
T Consensus 338 i~~~l~~l~~-~~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~edv~~~a~~~~ 415 (446)
T 1pp9_A 338 LQGQWMRLCT-SATESEVLRGKNLLRNALVSHLD-GTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYF 415 (446)
T ss_dssp HHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHTSSCCCHHHHHHHHHTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 9999999864-69999999999999999988058-899999999999997389899999999997399999999999973
Q ss_pred CCCCEEEEEEECCC
Q ss_conf 96861999980897
Q 001753 487 MPENMRIDVVSKSF 500 (1018)
Q Consensus 487 ~~~~~~i~~~~p~~ 500 (1018)
.+++..++++||..
T Consensus 416 ~~~~~~~~~~g~~~ 429 (446)
T 1pp9_A 416 YDQCPAVAGFGPIE 429 (446)
T ss_dssp TTCCCEEEEEESCT
T ss_pred CCCCCEEEEECCCC
T ss_conf 88886799988744
No 9
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=1.00 E-value=1 Score=418.70 Aligned_cols=408 Identities=14% Similarity=0.104 Sum_probs=344.1
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEE
Q ss_conf 66217893689889999679999777754335897655434467556653355433444401121014565553450279
Q 001753 22 RLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAAA 101 (1018)
Q Consensus 22 ~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (1018)
+.++.++|+||++|++++++.. + .+.+
T Consensus 5 ~~~~~~~L~NGl~v~~~~~~~~--------------~---------------------------------------~~~~ 31 (443)
T 1hr6_B 5 PGTRTSKLPNGLTIATEYIPNT--------------S---------------------------------------SATV 31 (443)
T ss_dssp CCCEEEECTTSCEEEEEECSSC--------------S---------------------------------------EEEE
T ss_pred CCCEEEECCCCCEEEEEECCCC--------------C---------------------------------------EEEE
T ss_conf 8745899899888999977999--------------8---------------------------------------7999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHH
Q ss_conf 99917778889999998249998761058767999007999999539962034289824899982910099999999951
Q 001753 102 AMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQF 181 (1018)
Q Consensus 102 ~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~~ 181 (1018)
.+++++|+..||.+..|+||++|||+|+||++++. .++.+.++.+|+.+|++|+.++|.|++++++++++.+|++++++
T Consensus 32 ~~~~~~Gs~~e~~~~~G~ah~le~~~~~Gt~~~~~-~~l~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~l~ll~d~ 110 (443)
T 1hr6_B 32 GIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRPQ-QGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDI 110 (443)
T ss_dssp EEEEECSGGGCCTTTTTHHHHHHHHTTSBBSSCBH-HHHHHHHHHTTCEEEEEECSSEEEEEEEEEGGGHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHCCCEEEEEECCCEEEEEEEECHHHHHHHHHHHHHH
T ss_conf 99985113789999876899999875058889998-99999999759967899878768999996477799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 10789992679999989999998611993999999998407999999866657433010042059228999999998217
Q 001753 182 FISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYY 261 (1018)
Q Consensus 182 ~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~y 261 (1018)
+.+|.|+++++++|++++.+|++...++|..++.+.+...+|++|||+++..|+.++|.+ ++.++|++||++||
T Consensus 111 ~~~p~f~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~------~~~~~l~~f~~~~y 184 (443)
T 1hr6_B 111 LTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKS------ITRTDLKDYITKNY 184 (443)
T ss_dssp HHSBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCHHHHHH------CCHHHHHHHHHHHC
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHCC
T ss_conf 857899999999999999999984127848899999999734799898888389999964------89999999999447
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHC
Q ss_conf 88871999984998889999999762434589888987654--4433445408999862666479999965896043303
Q 001753 262 QGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTV--EGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQEYLK 339 (1018)
Q Consensus 262 ~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~~~~~~ 339 (1018)
+|+||+|+++||+++++++++++++|+.||....+.+.... +.+.+..+......+..+++.+.++|+.+...+ .+.
T Consensus 185 ~~~n~~l~v~Gd~~~~~~~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~ 263 (443)
T 1hr6_B 185 KGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSA-PDY 263 (443)
T ss_dssp CGGGEEEEEEESCCHHHHHHHHHHHHTTSCCCSSCCCTTSCCSSCCCCCCEEEEEECTTCSEEEEEEEEECCCTTC-TTH
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCC-CCH
T ss_conf 6777799998599999999999998357998888877654557888877876874268855058999970599999-418
Q ss_pred CCHHHHHHHHCC---------CCCCCHHHHHH-HCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEC--HHHHHHHHHHHH
Q ss_conf 909999997238---------99981899998-567533130222676677654310799999909--323630999999
Q 001753 340 KSEDYLAHLLGH---------EGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLT--DSGLEKIFDIIG 407 (1018)
Q Consensus 340 ~~~~ll~~iLg~---------~~~~~L~~~Lr-~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~--~~g~~~~~~~~~ 407 (1018)
.++.+++.+||+ +..++|+..|| ++|++|++++..... . +.|.|.+++.+. + ++++++++
T Consensus 264 ~~l~vl~~iLg~~~r~~~~g~~~~s~L~~~lre~~glay~~~~~~~~~-~----~~g~~~i~~~~~~~~---~~~~~~~~ 335 (443)
T 1hr6_B 264 FVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSY-A----DSGLWGMYIVTDSNE---HNVRLIVN 335 (443)
T ss_dssp HHHHHHHHHHCEEETTTBCSSSSCCHHHHHHHSTTCSCSEEEEEEEEC-S----SCEEEEEEEEEETTT---CCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCC-C----CCEEEEEEEEECCCH---HHHHHHHH
T ss_conf 999999998089865578888866689999998709748998652477-7----762799999826876---67999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHH-
Q ss_conf 9999999999629924799999986303411466899079999999855-79995442223533557989999999840-
Q 001753 408 FVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNL-LIYPAEHVIYGEYMYEVWDEEMIKHLLGF- 485 (1018)
Q Consensus 408 ~i~~~l~~l~~~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~i~~~t~e~i~~~~~~- 485 (1018)
.+.++++.+++.++++++++++|..+...+....+ ++..++..++..+ ....+.+.......+.++|+++|++++++
T Consensus 336 ~~~~~l~~l~~~~~t~~el~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~~dv~~~a~~~ 414 (443)
T 1hr6_B 336 EILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLD-GSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYR 414 (443)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHSSCCCHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999753898999999999999999997268-99999999999998548868999999999728999999999998
Q ss_pred CCCCCEEEEEEECC
Q ss_conf 29686199998089
Q 001753 486 FMPENMRIDVVSKS 499 (1018)
Q Consensus 486 l~~~~~~i~~~~p~ 499 (1018)
+.+++..++++||.
T Consensus 415 l~~~~~~~~v~g~~ 428 (443)
T 1hr6_B 415 LQNKPVSMVALGNT 428 (443)
T ss_dssp SSSCCEEEEEEECG
T ss_pred HCCCCCEEEEECCC
T ss_conf 26688679998873
No 10
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A*
Probab=1.00 E-value=1 Score=411.96 Aligned_cols=403 Identities=11% Similarity=0.064 Sum_probs=338.0
Q ss_pred CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEE
Q ss_conf 46621789368988999967999977775433589765543446755665335543344440112101456555345027
Q 001753 21 KRLYRVIELENRLCALLVHDPEIYADDSSKTLENNTEEDEETFDDEYEDDEYEDEEEDDENDTEKEVKGKGIFSQTKKAA 100 (1018)
Q Consensus 21 ~~~~~~~~L~Ngl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (1018)
.+.++..+|+||++|++.+++. + .+.
T Consensus 3 ~~~~~~~~L~NGl~v~~~~~~~---------------~---------------------------------------~~~ 28 (475)
T 1hr6_A 3 TDNFKLSSLANGLKVATSNTPG---------------H---------------------------------------FSA 28 (475)
T ss_dssp TTCCEEEECTTSCEEEEESCCC---------------S---------------------------------------SEE
T ss_pred CCCCEEEECCCCCEEEEEECCC---------------C---------------------------------------EEE
T ss_conf 8884699878998899984899---------------8---------------------------------------799
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHH
Q ss_conf 99991777888999999824999876105876799900799999953996203428982489998291009999999995
Q 001753 101 AAMCVGMGSFCDPVEAQGLAHFLEHMLFMGSTEFPDENEYDSYLSKHGGSSNAYTETEHTCYHFEIKREFLKGALMRFSQ 180 (1018)
Q Consensus 101 ~~l~~~~Gs~~ep~~~~Glahlleh~lf~Gs~~~~~~~~~~~~l~~~g~~~na~t~~~~t~~~~~~~~~~l~~~L~~l~~ 180 (1018)
+.+++++|+++||++..|+|||+|||+|+||++++. .++.+.++..|+.+||+|+.++|.|++++++++++.+|+++++
T Consensus 29 ~~l~~~~Gs~~e~~~~~Glah~lehm~f~Gt~~~~~-~~~~~~le~~G~~~na~t~~d~t~y~~~~~~~~l~~~l~ll~d 107 (475)
T 1hr6_A 29 LGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEG-RAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSE 107 (475)
T ss_dssp EEEEESCCGGGCTTTTTTHHHHHHHTTTSCBTTBCH-HHHHHHHHHTTSCEEEEECSSCEEEEEEECGGGHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH-HHHHHHHHHCCCEEEEEECCCEEEEEEEECHHHHHHHHHHHHH
T ss_conf 999982136788999875999999998378999999-9999999982997887974673999998057889999999999
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHC
Q ss_conf 11078999267999998999999861199399999999840799999986665743301004205922899999999821
Q 001753 181 FFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNY 260 (1018)
Q Consensus 181 ~~~~P~~~~~~~~~e~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f~~~~ 260 (1018)
++.+|.|++++|++|++++.+|++...++|..++.+.+...+|++|||+++.+|+.++|.+ ++.++|++||++|
T Consensus 108 ~~~~p~f~~~~~~~er~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~------it~~~l~~f~~~~ 181 (475)
T 1hr6_A 108 TVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRGLIPS------ISKYYLLDYRNKF 181 (475)
T ss_dssp HHHCBCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTSGGGSCSSCCGGGGGG------CCHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH------CCHHHHHHHHHHH
T ss_conf 9848899999999999999999987654988999999999854899999987389899844------6999999999973
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE------ECCCCCEEEEEEECCCCH
Q ss_conf 78887199998499888999999976243458988898765444334454089998------626664799999658960
Q 001753 261 YQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE------AVKDVHILDLTWTLPCLH 334 (1018)
Q Consensus 261 y~p~n~~lvi~G~~~~~~l~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~i~~~~p~~~ 334 (1018)
|+|+||+|+|+| +++++++++++++|+.||....+... +.+.+..+ ...+. +..+++.+.++|+.++..
T Consensus 182 y~p~n~~l~v~G-~d~~~~~~~i~~~f~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 256 (475)
T 1hr6_A 182 YTPENTVAAFVG-VPHEKALELTGKYLGDWQSTHPPITK---KVAQYTGG-ESCIPPAPVFGNLPELFHIQIGFEGLPID 256 (475)
T ss_dssp CCGGGEEEEEES-SCHHHHHHHHHHHHTTCCCCCCCCCC---CCCCCCCE-EEEECCCCCCSSSCCCEEEEEEEECCCTT
T ss_pred CCCCCEEEEEEC-CCHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCCCC-EEEEECCCCCCCCCCCEEEEEEEECCCCC
T ss_conf 895458999937-88999999999983568888887778---88887687-69995555567886514999999658999
Q ss_pred HHHHCCCHHHHHHHHCCC-----------CCCCHHHHHH-HCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECHHHHHHH
Q ss_conf 433039099999972389-----------9981899998-5675331302226766776543107999999093236309
Q 001753 335 QEYLKKSEDYLAHLLGHE-----------GRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKI 402 (1018)
Q Consensus 335 ~~~~~~~~~ll~~iLg~~-----------~~~~L~~~Lr-~~glay~v~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 402 (1018)
..+..++.+++.+||++ +.++|+..|| ++|++|+++++.... . +.|.|.+++.+.+ +++
T Consensus 257 -~~d~~~l~vl~~iLg~~~~f~~gg~g~~~~s~L~~~lr~~~gl~y~v~s~~~~~-~----~~g~~~i~~~~~~---~~~ 327 (475)
T 1hr6_A 257 -HPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSY-S----DSGIFGISLSCIP---QAA 327 (475)
T ss_dssp -CTTHHHHHHHHHHHCEEESSCCSSTTSCTTSHHHHHTTTTCSSEEEEEEEEEEC-S----SCEEEEEEEEECG---GGH
T ss_pred -CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCC-C----CCCEEEEEEEECH---HHH
T ss_conf -966899999999968996555678887757789999998648706999740566-7----8845999999678---889
Q ss_pred HHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHH
Q ss_conf 9999999999999996---299247999999863034114668990799999998557-999544222353355798999
Q 001753 403 FDIIGFVYQYIKLLRQ---VSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLL-IYPAEHVIYGEYMYEVWDEEM 478 (1018)
Q Consensus 403 ~~~~~~i~~~l~~l~~---~~i~~~~l~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~i~~~t~e~ 478 (1018)
+++++.+.++++.+++ +++++++++++|+.+...+....+ ++...+..++..+. ...+.........++++|+++
T Consensus 328 ~~~~~~~~~~l~~l~~~~~~~~t~~El~~ak~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~vt~~d 406 (475)
T 1hr6_A 328 PQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLE-SKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDD 406 (475)
T ss_dssp HHHHHHHHHHHHTTTTCTTSCCCHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHSCCCCHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
T ss_conf 9999999999999973047998999999999999999998479-899999999999996599899999999997589999
Q ss_pred HHHHHHH-CCC---------CCEEEEEEECC
Q ss_conf 9999840-296---------86199998089
Q 001753 479 IKHLLGF-FMP---------ENMRIDVVSKS 499 (1018)
Q Consensus 479 i~~~~~~-l~~---------~~~~i~~~~p~ 499 (1018)
|++++++ +.+ +++.++++||.
T Consensus 407 v~~~a~~~l~~~~~~~~~~~~~~~~~v~g~~ 437 (475)
T 1hr6_A 407 ISRVAEMIFTGNVNNAGNGKGRATVVMQGDR 437 (475)
T ss_dssp HHHHHHHHHTTCCCCTTCCCCCCEEEEESCG
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf 9999999864104432246788379998884
Done!