Your job contains 1 sequence.
>001760
MLSFKTRADVSICGCVCISSVDGYYLCPNNFFFLLICFRLFERGLAYVGTDYLSFPLWDK
YIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFAASRPLSELRTAEEVDAAAVA
VAAAPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEELEKYIAVREEMYKKAKEFDS
KIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGDFNKVVKLYERCLIACANYPEY
WIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFKEQNGDIDGARAAYQLVH
TETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHL
VSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVDKFLMSNSDSP
STANAAEREELSCVFLEFLGLFGDAQLIKKAEDRHARLFLPHRSTSELRKRHAEDFLASE
RAKMAKSYSGAPSPAQSLMGAYPSSQNPWAAGYGVQPQTWPPATQAQAQQWNQQAAYGAY
SAYGSSYPTPQTSVPQNAAYGAYPPAYPAQVGSYFVGQYYQVLQQQPDLVHQFYSDASSM
IRVDGDSTESASSMLDIHSLVISLNFTAIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRR
RKFVQTFFLAPQEKGYFVLNDIFHFLDEEPVYQHPAPVLSENKFDVQHDASSPIPEQAGL
AASDYVLEEEAREYVSSVHIEDDATDNYSLPEQQQDEEPESEEVDEEIPAEEIPASFQTD
VSPVQPPPAPAVEEPVDEPQRKTYASILRVSKSQSTSFVATQPSFTKTASTTSDWNPAPQ
PTTQQSNYTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVTAFEIEE
EFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQASPIQLAGRQVYIEERRP
NTGSTSRGGRRGRGRGSYQTDAPRGRFGGRGLGRGSAQDGGDYNRSRGNGFYQRGSQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001760
(1017 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172472 - symbol:AT5G43960 species:3702 "Arabi... 619 1.6e-107 2
TAIR|locus:2170453 - symbol:PRP39-2 species:3702 "Arabido... 828 1.0e-84 2
UNIPROTKB|E1C8G8 - symbol:PRPF39 "Uncharacterized protein... 488 9.4e-46 1
ZFIN|ZDB-GENE-030616-420 - symbol:prpf39 "PRP39 pre-mRNA ... 500 3.4e-45 1
UNIPROTKB|A8E4M9 - symbol:PRPF39 "Uncharacterized protein... 479 8.9e-45 1
UNIPROTKB|F1SI15 - symbol:PRPF39 "Uncharacterized protein... 485 1.8e-44 1
UNIPROTKB|F1PV57 - symbol:PRPF39 "Uncharacterized protein... 482 5.5e-44 1
RGD|1308702 - symbol:Prpf39 "PRP39 pre-mRNA processing fa... 479 1.2e-43 1
UNIPROTKB|Q86UA1 - symbol:PRPF39 "Pre-mRNA-processing fac... 478 2.4e-43 1
UNIPROTKB|D4A0B1 - symbol:D4A0B1 "Uncharacterized protein... 451 9.6e-42 1
MGI|MGI:104602 - symbol:Prpf39 "PRP39 pre-mRNA processing... 459 5.5e-41 1
ASPGD|ASPL0000046692 - symbol:AN1635 species:162425 "Emer... 329 2.6e-40 2
TAIR|locus:2173567 - symbol:AT5G60980 species:3702 "Arabi... 265 1.4e-38 2
POMBASE|SPBC4B4.09 - symbol:usp105 "U1 snRNP-associated p... 416 2.8e-36 1
FB|FBgn0039600 - symbol:CG1646 species:7227 "Drosophila m... 343 6.4e-33 2
TAIR|locus:2152566 - symbol:AT5G48650 species:3702 "Arabi... 207 6.8e-28 2
UNIPROTKB|E2RPB9 - symbol:PRPF39 "Uncharacterized protein... 320 1.2e-27 1
UNIPROTKB|G4MRU5 - symbol:MGG_04558 "Pre-mRNA-processing ... 333 5.9e-27 2
TAIR|locus:2023854 - symbol:AT1G13730 species:3702 "Arabi... 206 3.9e-23 2
POMBASE|SPBP8B7.11 - symbol:nxt3 "ubiquitin protease cofa... 253 1.6e-21 3
TAIR|locus:2098555 - symbol:AT3G07250 species:3702 "Arabi... 178 1.4e-20 2
ASPGD|ASPL0000013038 - symbol:AN8268 species:162425 "Emer... 207 8.8e-20 2
DICTYBASE|DDB_G0283307 - symbol:prpf39 "pre-mRNA processi... 270 1.9e-19 2
TAIR|locus:2026423 - symbol:AT1G69250 species:3702 "Arabi... 170 2.8e-19 2
UNIPROTKB|I3LPH5 - symbol:G3BP2 "Uncharacterized protein"... 198 4.1e-17 2
UNIPROTKB|Q2KJ17 - symbol:G3BP2 "GTPase activating protei... 195 9.0e-17 2
RGD|1309571 - symbol:G3bp2 "GTPase activating protein (SH... 194 1.2e-16 2
UNIPROTKB|E2QYY6 - symbol:G3BP2 "Uncharacterized protein"... 195 1.2e-16 3
UNIPROTKB|Q9UN86 - symbol:G3BP2 "Ras GTPase-activating pr... 195 1.2e-16 2
MGI|MGI:2442040 - symbol:G3bp2 "GTPase activating protein... 194 1.6e-16 2
UNIPROTKB|F6XCI1 - symbol:G3BP2 "Uncharacterized protein"... 195 2.1e-16 3
UNIPROTKB|D6RB17 - symbol:G3BP2 "Ras GTPase-activating pr... 195 4.0e-16 2
ZFIN|ZDB-GENE-070112-1972 - symbol:g3bp2 "GTPase activati... 183 4.8e-16 2
WB|WBGene00017768 - symbol:F25B4.5 species:6239 "Caenorha... 232 7.0e-16 2
UNIPROTKB|E1C769 - symbol:G3BP2 "Uncharacterized protein"... 184 1.3e-15 2
UNIPROTKB|Q32LC7 - symbol:G3BP "Ras GTPase-activating pro... 193 1.5e-15 2
MGI|MGI:1351465 - symbol:G3bp1 "GTPase activating protein... 190 2.0e-15 2
UNIPROTKB|F1RQB6 - symbol:G3BP1 "Uncharacterized protein"... 189 2.6e-15 2
UNIPROTKB|Q13283 - symbol:G3BP1 "Ras GTPase-activating pr... 195 3.0e-15 2
UNIPROTKB|E2RN45 - symbol:G3BP1 "Uncharacterized protein"... 192 5.1e-15 2
ZFIN|ZDB-GENE-040426-2698 - symbol:zgc:56304 "zgc:56304" ... 179 1.2e-14 3
ZFIN|ZDB-GENE-030131-7452 - symbol:g3bp1 "GTPase activati... 184 2.2e-14 2
SGD|S000004509 - symbol:PRP39 "U1 snRNP protein involved ... 150 3.3e-14 2
UNIPROTKB|Q5ZMN1 - symbol:G3BP1 "Uncharacterized protein"... 190 6.7e-14 3
UNIPROTKB|F1LVS8 - symbol:F1LVS8 "Uncharacterized protein... 185 8.6e-13 2
FB|FBgn0015778 - symbol:rin "rasputin" species:7227 "Dros... 183 8.7e-13 2
UNIPROTKB|D6RAC7 - symbol:G3BP2 "Ras GTPase-activating pr... 179 1.5e-12 1
UNIPROTKB|E5RJU8 - symbol:G3BP1 "Ras GTPase-activating pr... 167 2.9e-11 1
UNIPROTKB|E5RH42 - symbol:G3BP1 "Ras GTPase-activating pr... 165 4.8e-11 1
UNIPROTKB|Q5HYE9 - symbol:DKFZp313K0921 "Putative unchara... 165 4.8e-11 1
UNIPROTKB|D6RGJ4 - symbol:G3BP2 "Ras GTPase-activating pr... 158 2.7e-10 1
UNIPROTKB|D6RBW8 - symbol:G3BP2 "Ras GTPase-activating pr... 156 4.4e-10 1
UNIPROTKB|E5RIZ6 - symbol:G3BP1 "Ras GTPase-activating pr... 138 3.6e-08 1
UNIPROTKB|D6RE13 - symbol:G3BP2 "Ras GTPase-activating pr... 136 6.0e-08 1
UNIPROTKB|F1M2M6 - symbol:F1M2M6 "Uncharacterized protein... 150 1.3e-07 2
UNIPROTKB|E5RI46 - symbol:G3BP1 "Ras GTPase-activating pr... 131 2.0e-07 1
UNIPROTKB|E5RIF8 - symbol:G3BP1 "Ras GTPase-activating pr... 131 2.0e-07 1
TAIR|locus:2152965 - symbol:AT5G41770 species:3702 "Arabi... 149 3.0e-07 2
UNIPROTKB|D6RBR0 - symbol:G3BP2 "Ras GTPase-activating pr... 126 7.0e-07 1
UNIPROTKB|D6REX8 - symbol:G3BP2 "Ras GTPase-activating pr... 126 7.0e-07 1
FB|FBgn0032680 - symbol:Ntf-2r "Nuclear transport factor-... 125 8.9e-07 1
DICTYBASE|DDB_G0277957 - symbol:DDB_G0277957 "nuclear tra... 111 9.7e-07 2
FB|FBgn0031145 - symbol:Ntf-2 "Nuclear transport factor-2... 124 1.1e-06 1
ASPGD|ASPL0000071333 - symbol:ntfA species:162425 "Emeric... 119 3.9e-06 1
TAIR|locus:2007973 - symbol:CSTF77 species:3702 "Arabidop... 125 5.5e-06 2
GENEDB_PFALCIPARUM|PF14_0122 - symbol:PF14_0122 "nuclear ... 114 1.3e-05 1
UNIPROTKB|Q8ILX1 - symbol:PF14_0122 "Nuclear transport fa... 114 1.3e-05 1
SGD|S000000811 - symbol:NTF2 "Nuclear envelope protein" s... 113 1.7e-05 1
UNIPROTKB|D6RBM9 - symbol:G3BP2 "Ras GTPase-activating pr... 111 2.8e-05 1
FB|FBgn0000377 - symbol:crn "crooked neck" species:7227 "... 109 2.9e-05 2
TAIR|locus:2080853 - symbol:AT3G51110 species:3702 "Arabi... 132 3.7e-05 1
POMBASE|SPAC15F9.03c - symbol:nxt2 "nuclear transport fac... 107 7.5e-05 1
TAIR|locus:2099926 - symbol:AT3G55540 species:3702 "Arabi... 126 0.00011 1
UNIPROTKB|F1P3Q8 - symbol:CRNKL1 "Uncharacterized protein... 102 0.00013 2
DICTYBASE|DDB_G0278819 - symbol:DDB_G0278819 "HAT repeat-... 121 0.00014 2
TAIR|locus:2015914 - symbol:NTF2A "AT1G27310" species:370... 103 0.00020 1
TAIR|locus:2200066 - symbol:NTL "NTF2-like" species:3702 ... 102 0.00025 1
TAIR|locus:2142519 - symbol:AT5G10350 species:3702 "Arabi... 116 0.00027 2
DICTYBASE|DDB_G0276425 - symbol:nutf2 "nuclear transport ... 101 0.00033 1
WB|WBGene00003904 - symbol:pabp-2 species:6239 "Caenorhab... 116 0.00038 1
WB|WBGene00004305 - symbol:ran-4 species:6239 "Caenorhabd... 99 0.00053 1
TAIR|locus:2171780 - symbol:AT5G65260 species:3702 "Arabi... 115 0.00067 1
>TAIR|locus:2172472 [details] [associations]
symbol:AT5G43960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 EMBL:AB006703 HOGENOM:HOG000239086 EMBL:AY080755
EMBL:AY114017 IPI:IPI00523493 RefSeq:NP_199209.1 UniGene:At.24860
ProteinModelPortal:Q9FND0 SMR:Q9FND0 IntAct:Q9FND0 STRING:Q9FND0
PaxDb:Q9FND0 PRIDE:Q9FND0 EnsemblPlants:AT5G43960.1 GeneID:834419
KEGG:ath:AT5G43960 TAIR:At5g43960 eggNOG:NOG295220
InParanoid:Q9FND0 OMA:INSVESW PhylomeDB:Q9FND0
ProtClustDB:CLSN2686872 ArrayExpress:Q9FND0 Genevestigator:Q9FND0
Uniprot:Q9FND0
Length = 450
Score = 619 (223.0 bits), Expect = 1.6e-107, Sum P(2) = 1.6e-107
Identities = 122/181 (67%), Positives = 145/181 (80%)
Query: 570 QVGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAI 629
QVGSYFVGQYYQVLQQQPDL+HQFYS+ S IR+DGDSTE+A+S+L IH++V+SLNFTAI
Sbjct: 10 QVGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGDSTETANSLLHIHNMVMSLNFTAI 69
Query: 630 EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFLDEE 689
E+KTINS+ SW GGVLV+VSGSVKTKEF RR FVQTFFLAPQEKGYFVL+D+F F+DE
Sbjct: 70 EVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKGYFVLSDVFLFVDEG 129
Query: 690 PVYQHPAPVLSENKFDVQHDASSPIPEQAGLAASDYVLEEEAREYVSSVHIEDDATDNYS 749
VY H LSE K + Q + + P+ SDYVLEEEA +YV++V I+DD D YS
Sbjct: 130 TVYYHQPSYLSEIKHEAQLNPPTRHPDPQ---VSDYVLEEEASDYVNAVQIKDDLVDKYS 186
Query: 750 L 750
L
Sbjct: 187 L 187
Score = 466 (169.1 bits), Expect = 1.6e-107, Sum P(2) = 1.6e-107
Identities = 105/220 (47%), Positives = 140/220 (63%)
Query: 801 RKTYASILRVSKSQSTSFVA-TQPSFTKTASTTSDWN-PAPQPTTQQSNYTSSFVPESGV 858
+ +YASIL+V+K +T VA TQPS+ K++ ++W+ P P+ Q + + + +S
Sbjct: 235 KMSYASILKVAKEAATVPVAATQPSYNKSSQDINEWDQPMRTPSPQLAAPLAP-IQQSNS 293
Query: 859 SSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNR 918
S+++ + G EA D S G ++ E KSVYVRNLPS ++A EIEEEF+NFG IKPDGVF+R R
Sbjct: 294 STYVSDYGAEAEDGS-GFEDFEFKSVYVRNLPSDISASEIEEEFKNFGTIKPDGVFLRTR 352
Query: 919 KDVVGVCYAFVEFEDISGVQNAIQASPIQLAGRQVYIEERRPN-XXXXXXXXXXXXXXXX 977
KDV+GVCYAFVEFED++ V+NAI+ASPI L GRQVYIEERRPN
Sbjct: 353 KDVMGVCYAFVEFEDMTSVENAIKASPIYLGGRQVYIEERRPNPAGVRGARRGGGRGRGG 412
Query: 978 YQTDAPXXXXXXXXXXXXXXXXXXDYNRSRGNGFYQRGSQ 1017
Y T+AP DY R RGNG+Y+ G +
Sbjct: 413 YPTEAPRGRFGGRGSGRGNQDGG-DY-RPRGNGYYRGGGR 450
>TAIR|locus:2170453 [details] [associations]
symbol:PRP39-2 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR003107 SMART:SM00386 EMBL:CP002688 GO:GO:0005622
GO:GO:0006396 KO:K13217 IPI:IPI00548633 RefSeq:NP_199452.2
UniGene:At.29958 ProteinModelPortal:F4KHG8 SMR:F4KHG8 PRIDE:F4KHG8
EnsemblPlants:AT5G46400.1 GeneID:834683 KEGG:ath:AT5G46400
OMA:HIKLFPH ArrayExpress:F4KHG8 Uniprot:F4KHG8
Length = 1036
Score = 828 (296.5 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 176/432 (40%), Positives = 256/432 (59%)
Query: 39 RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKE 98
RLFERGL+++G DY LWDKYIEY QQ+WS +A +Y R L+ P ++LD Y+ +F++
Sbjct: 138 RLFERGLSFIGKDYSCCTLWDKYIEYLLGQQQWSSLANVYLRTLKYPSKKLDLYYKNFRK 197
Query: 99 FAASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEA 158
AAS L E + E + +EE+ E S+ +++A
Sbjct: 198 IAAS--LKE-KIKCRIDVNGDLSSDPMEEDLVHTRHTDEEISIVVRELMGPSSSSAVSKA 254
Query: 159 EELEKYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDG 218
L Y+++ E+ Y+ +++ KI FET IRRPYFHVKPL +L+NWH YL F E G
Sbjct: 255 --LHTYLSIGEQFYQDSRQLMEKISCFETQIRRPYFHVKPLDTNQLDNWHAYLSFGETYG 312
Query: 219 DFNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLF 278
DF+ + LYERCLI CANY E+W RYV +E+ G +LA+ ALARA+ FVK IHLF
Sbjct: 313 DFDWAINLYERCLIPCANYTEFWFRYVDFVESKGGRELANFALARASQTFVKSASVIHLF 372
Query: 279 AARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIE 338
ARFKE GD A A E G +E + K ANME+RLGN E A + Y +A+
Sbjct: 373 NARFKEHVGDASAASVALSRCGEELGFGFVENVTKKANMEKRLGNFEAAVTTYREALNKT 432
Query: 339 K-GKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQS 397
GKE+ +T LY Q+SR ++++ +A+ A QIL++ ++V K LLE L+ +
Sbjct: 433 LIGKENLETTARLYVQFSRLKYVITNSADDAAQILLEGNENVPHCKLLLEELMRLLMMHG 492
Query: 398 SPKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEFLGLFGDAQLIKKAEDRHAR 457
+Q+D L+ ++DK L +DS +A ++EE+S +++EF+ L G ++KA RH +
Sbjct: 493 GSRQVDLLDPIIDKELSHQADSSDGLSAEDKEEISNLYMEFIDLSGTIHDVRKALGRHIK 552
Query: 458 LFLPHRSTSELR 469
LF PH + ++LR
Sbjct: 553 LF-PHSARAKLR 563
Score = 39 (18.8 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 14/67 (20%), Positives = 23/67 (34%)
Query: 550 PQTSVPQNXXXXXXXXXXXXQVGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTE 609
PQT +PQN Q G + Y + QQ + +Y ++ +
Sbjct: 854 PQTQIPQNPVQSNYQ-----QEGQMQSHEAYNQMWQQYYYSYYYYQQQQQLMSEQPQPNQ 908
Query: 610 SASSMLD 616
+ LD
Sbjct: 909 NPQPQLD 915
>UNIPROTKB|E1C8G8 [details] [associations]
symbol:PRPF39 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 SMART:SM00386 GO:GO:0005634 GO:GO:0006396
Gene3D:1.25.40.10 GeneTree:ENSGT00390000005033 OMA:GWVYLLQ
EMBL:AADN02004089 IPI:IPI00598251 Ensembl:ENSGALT00000020376
Uniprot:E1C8G8
Length = 628
Score = 488 (176.8 bits), Expect = 9.4e-46, P = 9.4e-46
Identities = 139/462 (30%), Positives = 218/462 (47%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
+E + GTD+ S LW+ YI +E Q V IY RIL P Q +F FK+
Sbjct: 152 YEHAVLAAGTDFRSDRLWEMYINWEDEQGNLREVTSIYDRILGIPTQLYSHHFQRFKDHV 211
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T G + A ++ P TE + P +TE E
Sbjct: 212 QNNLPRDLLTSEQFIQLRRELASVNGHAGGDASAGDD--LPSGTEDITDPAKL-ITEIEN 268
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 269 MRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 328
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y ++WI+Y ME + S++ + +RA + + + P +H+
Sbjct: 329 HERVVVLFERCVISCALYEDFWIKYAKYME-NHSIEGVRHVYSRACTIHLPKKPMVHMLW 387
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+ID AR + E GL ++ ++ERR GN+E+A L E+A+ K
Sbjct: 388 AAFEEQQGNIDEARRILKTFE-ECILGLAMVRLRRVSLERRHGNMEEAERLLEEAVRNAK 446
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
S YA + +R L V +N KAR++L D+++ + + L L+ E
Sbjct: 447 SVSESS----FYAIKLARHLFKVQKNLPKARKVLSDAIEIDKENTKLYLNLLEMEYCGDL 502
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHAR 457
+ + + DK + + ++R+ +EFL FG D + A D H
Sbjct: 503 TQNEENILSCFDKAVNGSLSIKMRVTFSQRK------VEFLEDFGSDVNKLLDAYDEHQA 556
Query: 458 LFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLM 499
L L + T KR AE+ SE K + + A + M
Sbjct: 557 L-LKEQDTL---KRRAEN--GSEEPDEKKMLTDEQTMASAQM 592
>ZFIN|ZDB-GENE-030616-420 [details] [associations]
symbol:prpf39 "PRP39 pre-mRNA processing factor 39
homolog (yeast)" species:7955 "Danio rerio" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR003107 InterPro:IPR011990 SMART:SM00386
ZFIN:ZDB-GENE-030616-420 GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
Gene3D:1.25.40.10 eggNOG:COG5107 EMBL:AL591492 EMBL:BC116540
IPI:IPI00481955 RefSeq:NP_001004520.1 UniGene:Dr.340
ProteinModelPortal:Q1JPZ7 STRING:Q1JPZ7 PRIDE:Q1JPZ7
Ensembl:ENSDART00000061672 GeneID:368864 KEGG:dre:368864 CTD:55015
GeneTree:ENSGT00390000005033 HOGENOM:HOG000010277
HOVERGEN:HBG082194 InParanoid:Q1JPZ7 KO:K13217 OMA:GWVYLLQ
OrthoDB:EOG49GKG9 NextBio:20813235 ArrayExpress:Q1JPZ7 Bgee:Q1JPZ7
Uniprot:Q1JPZ7
Length = 752
Score = 500 (181.1 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 147/455 (32%), Positives = 226/455 (49%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
+E + GTD+ S LW+ YI +E Q + + V IY R+L P Q ++F FK+
Sbjct: 263 YEHAVLACGTDFRSDRLWEAYIAWETEQGKLANVTAIYDRLLCIPTQLYSQHFQKFKDHV 322
Query: 101 ASR-PLSEL-RTXXXXXXXXXXXXXXPS-ETGAEVKANEEEVQPDATEQTSKPVSAGLTE 157
S P L PS + AE +A EE+ P TE P +TE
Sbjct: 323 QSNNPKHFLSEEEFVSLRVELANANKPSGDEDAETEAPGEELPP-GTEDLPDPAKR-VTE 380
Query: 158 AEELE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIER 216
E + K I R+EM+ + SK FE I+RPYFHVK L T+L NW YLDF
Sbjct: 381 IENMRHKVIETRQEMFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWREYLDFELE 440
Query: 217 DGDFNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIH 276
+G +VV L+ERCLIACA Y E+WI+Y +E S S + + +A V + + P +H
Sbjct: 441 NGTPERVVVLFERCLIACALYEEFWIKYAKYLE-SYSTEAVRHIYKKACTVHLPKKPNVH 499
Query: 277 LFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIA 336
L A F+EQ G ID AR+ + V PGL ++ ++ERR GN+E+A +L + AI
Sbjct: 500 LLWAAFEEQQGSIDEARSILKAVEVSV-PGLAMVRLRRVSLERRHGNMEEAEALLQDAIT 558
Query: 337 IEKGKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESI 395
G+ S++ Y+ + +R L V ++ +A+++L+++++ + + L L+ E
Sbjct: 559 --NGRNSSES--SFYSVKLARQLVKVQKSIGRAKKVLLEAVEKDETNPKLYLNLLELE-- 612
Query: 396 QSSPKQIDFLEQLV--DKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAE 452
S Q + E + D+ L S+ S ++R+ ++FL FG D + A
Sbjct: 613 YSGDVQQNEAEIIACFDRALSSSMALESRITFSQRK------VDFLEDFGSDINTLMAAY 666
Query: 453 DRHARLFLPHRSTSELRKRHAEDFLASERAKMAKS 487
++H RL S KR AE+ AK ++
Sbjct: 667 EQHQRLLAEQESF----KRKAENGSEEPDAKRQRT 697
>UNIPROTKB|A8E4M9 [details] [associations]
symbol:PRPF39 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
SMART:SM00386 GO:GO:0005634 GO:GO:0006396 Gene3D:1.25.40.10
CTD:55015 GeneTree:ENSGT00390000005033 HOGENOM:HOG000010277
HOVERGEN:HBG082194 KO:K13217 OMA:GWVYLLQ OrthoDB:EOG49GKG9
eggNOG:NOG298273 EMBL:DAAA02052958 EMBL:BC149776 IPI:IPI00710325
RefSeq:NP_001103259.1 UniGene:Bt.27128 Ensembl:ENSBTAT00000003373
GeneID:505547 KEGG:bta:505547 InParanoid:A8E4M9 NextBio:20867193
Uniprot:A8E4M9
Length = 548
Score = 479 (173.7 bits), Expect = 8.9e-45, P = 8.9e-45
Identities = 136/469 (28%), Positives = 218/469 (46%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V IY RIL P Q +F FK+
Sbjct: 71 FEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQRFKDHV 130
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T +G + ++ P E + P +TE E
Sbjct: 131 QNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDD--LPSGIEDITDPAKL-ITEIEN 187
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 188 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 247
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA + + + P +H+
Sbjct: 248 HERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLW 306
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L ++AI K
Sbjct: 307 AAFEEQQGNINEARNILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAERLLQEAIKNAK 365
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 366 SNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL 421
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHAR 457
+ D + DK + + ++R+ +EFL FG D + A D H
Sbjct: 422 KQNEDNILNCFDKAIHGSLPIKMRITFSQRK------VEFLEDFGSDVNKLLNAYDEHQT 475
Query: 458 LFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSSQ 506
L S KR AE+ K A + S Q + G ++Q
Sbjct: 476 LLKEQDSL----KRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQ 520
>UNIPROTKB|F1SI15 [details] [associations]
symbol:PRPF39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
SMART:SM00386 GO:GO:0005634 GO:GO:0006396 Gene3D:1.25.40.10
GeneTree:ENSGT00390000005033 OMA:GWVYLLQ EMBL:CU570961
Ensembl:ENSSSCT00000005511 Uniprot:F1SI15
Length = 667
Score = 485 (175.8 bits), Expect = 1.8e-44, P = 1.8e-44
Identities = 136/480 (28%), Positives = 219/480 (45%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V IY RIL P Q +F FKE
Sbjct: 190 FEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQRFKEHV 249
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T +G + ++ P E + P +TE E
Sbjct: 250 QNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDD--LPSGIEDITDPAKKLITEIEN 307
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 308 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 367
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA + + + P +H+
Sbjct: 368 HERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLW 426
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L + AI K
Sbjct: 427 AAFEEQQGNINEARNILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAERLLQDAIKNAK 485
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 486 ANNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL 541
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAER-----EELSCVFLEFLGLFGDAQLIKKAED 453
+ + + DK + + ++R E+ + L + + Q + K +D
Sbjct: 542 KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD 601
Query: 454 RHARLFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSS-QNPWAAG 512
R E +K H ED S +M A A + Y + QNPW G
Sbjct: 602 SLKRKAENGSEEPEEKKAHTED--TSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYG 659
>UNIPROTKB|F1PV57 [details] [associations]
symbol:PRPF39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 SMART:SM00386 GO:GO:0005634 GO:GO:0006396
Gene3D:1.25.40.10 CTD:55015 GeneTree:ENSGT00390000005033 KO:K13217
OMA:GWVYLLQ EMBL:AAEX03005706 RefSeq:XP_851059.2
Ensembl:ENSCAFT00000022300 GeneID:480305 KEGG:cfa:480305
Uniprot:F1PV57
Length = 667
Score = 482 (174.7 bits), Expect = 5.5e-44, P = 5.5e-44
Identities = 136/480 (28%), Positives = 220/480 (45%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V IY RIL P Q +F FKE
Sbjct: 190 FEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQRFKEHV 249
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T +G + ++ P E + P +TE E
Sbjct: 250 QNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDD--LPSGIEDITDPAKL-ITEIEN 306
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 307 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 366
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA + + + P +H+
Sbjct: 367 HERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLW 425
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L + AI K
Sbjct: 426 AAFEEQQGNINEARNILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAK 484
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 485 SNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL 540
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAER-----EELSCVFLEFLGLFGDAQLIKKAED 453
+ + + DK + + ++R E+ + L + + Q + K +D
Sbjct: 541 KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD 600
Query: 454 RHARLFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSS-QNPWAAG 512
R E +K H ED +S +M A A + Y + QNPW G
Sbjct: 601 SLKRKAENGSEEPEEKKAHTED-TSSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYG 659
>RGD|1308702 [details] [associations]
symbol:Prpf39 "PRP39 pre-mRNA processing factor 39 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003107 InterPro:IPR011990 SMART:SM00386 RGD:1308702
GO:GO:0005634 GO:GO:0006396 Gene3D:1.25.40.10 CTD:55015
GeneTree:ENSGT00390000005033 KO:K13217 OrthoDB:EOG49GKG9
IPI:IPI00948194 RefSeq:XP_003750219.1 RefSeq:XP_003754228.1
UniGene:Rn.12521 Ensembl:ENSRNOT00000066702 GeneID:314171
KEGG:rno:314171 UCSC:RGD:1308702 ArrayExpress:D4A5S9 Uniprot:D4A5S9
Length = 664
Score = 479 (173.7 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 139/469 (29%), Positives = 222/469 (47%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V +Y RIL P Q +F FKE
Sbjct: 189 FEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHV 248
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T G + ++ P E + P +TE E
Sbjct: 249 QNNLPRDLLTGEQFIQLRRELASVNGHNGDDGPPGDD--LPSGIEDITDPAKL-ITEIEN 305
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 306 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 365
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA V + + P H+
Sbjct: 366 HERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHMLW 424
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L + AI K
Sbjct: 425 AAFEEQQGNINEARIILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIRNAK 483
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 484 SNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCDL 539
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHAR 457
+ + + DK + + ++R+ +EFL FG D + A D H
Sbjct: 540 KQNEENILNCFDKAIHGSLPIKMRITFSQRK------VEFLEDFGSDVNKLLNAYDEHQT 593
Query: 458 LFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSSQ 506
L L + T KR AE+ SE + K+++ S AQ + G ++Q
Sbjct: 594 L-LKEQDTL---KRKAEN--GSEEPEEKKAHTEDVSSAQIIDGDLQANQ 636
>UNIPROTKB|Q86UA1 [details] [associations]
symbol:PRPF39 "Pre-mRNA-processing factor 39" species:9606
"Homo sapiens" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR003107 InterPro:IPR011990 SMART:SM00386 GO:GO:0005634
GO:GO:0008380 GO:GO:0006397 Gene3D:1.25.40.10 eggNOG:COG5107
EMBL:AL121809 CTD:55015 HOGENOM:HOG000010277 HOVERGEN:HBG082194
KO:K13217 OMA:GWVYLLQ OrthoDB:EOG49GKG9 EMBL:AK001990 EMBL:BC051886
EMBL:BC125126 EMBL:BC125127 IPI:IPI00789246 IPI:IPI00878754
RefSeq:NP_060392.3 UniGene:Hs.274337 ProteinModelPortal:Q86UA1
SMR:Q86UA1 IntAct:Q86UA1 STRING:Q86UA1 PhosphoSite:Q86UA1
DMDM:223590245 PaxDb:Q86UA1 PRIDE:Q86UA1 Ensembl:ENST00000355765
GeneID:55015 KEGG:hsa:55015 UCSC:uc001wvy.4 UCSC:uc001wwa.1
GeneCards:GC14P045553 H-InvDB:HIX0011621 HGNC:HGNC:20314
HPA:HPA001176 MIM:614907 neXtProt:NX_Q86UA1 PharmGKB:PA142671127
InParanoid:Q86UA1 GenomeRNAi:55015 NextBio:58381
ArrayExpress:Q86UA1 Bgee:Q86UA1 CleanEx:HS_PRPF39
Genevestigator:Q86UA1 GermOnline:ENSG00000185246 Uniprot:Q86UA1
Length = 669
Score = 478 (173.3 bits), Expect = 2.4e-43, P = 2.4e-43
Identities = 136/480 (28%), Positives = 219/480 (45%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V IY RIL P Q +F FKE
Sbjct: 192 FEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQRFKEHV 251
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T +G + ++ P E + P +TE E
Sbjct: 252 QNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDD--LPSGIEDITDPAKL-ITEIEN 308
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 309 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 368
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA + + + P +H+
Sbjct: 369 HERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLW 427
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+I+ AR + E GL ++ ++ERR GNLE+A L + AI K
Sbjct: 428 AAFEEQQGNINEARNILKTFE-ECVLGLAMVRLRRVSLERRHGNLEEAEHLLQDAIKNAK 486
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 487 SNNESS----FYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL 542
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAER-----EELSCVFLEFLGLFGDAQLIKKAED 453
+ + + DK + + ++R E+ + L + + Q + K +D
Sbjct: 543 KQNEENILNCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD 602
Query: 454 RHARLFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSS-QNPWAAG 512
R E +K H ED +S +M A + Y + QNPW G
Sbjct: 603 SLKRKAENGSEEPEEKKAHTEDTTSSS-TQMIDGDLQANQAVYNYSAWYQYNYQNPWNYG 661
>UNIPROTKB|D4A0B1 [details] [associations]
symbol:D4A0B1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 SMART:SM00386 GO:GO:0005622 GO:GO:0006396
Gene3D:1.25.40.10 GeneTree:ENSGT00390000005033 IPI:IPI00951935
Ensembl:ENSRNOT00000065090 ArrayExpress:D4A0B1 Uniprot:D4A0B1
Length = 426
Score = 451 (163.8 bits), Expect = 9.6e-42, P = 9.6e-42
Identities = 112/355 (31%), Positives = 176/355 (49%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V +Y RIL P Q +F FKE
Sbjct: 71 FEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHV 130
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T G + ++ P E + P +TE E
Sbjct: 131 QNNLPRDLLTGEQFIQLRRELASVNGHNGDDGPPGDD--LPSGIEDITDPAKL-ITEIEN 187
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 188 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 247
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFA 279
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA V + + P H+
Sbjct: 248 HERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHMLW 306
Query: 280 ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEK 339
A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L + AI K
Sbjct: 307 AAFEEQQGNINEARIILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIRNAK 365
Query: 340 GKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFE 393
S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 366 SNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEME 416
>MGI|MGI:104602 [details] [associations]
symbol:Prpf39 "PRP39 pre-mRNA processing factor 39 homolog
(yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 SMART:SM00386 MGI:MGI:104602 GO:GO:0005634
GO:GO:0008380 GO:GO:0006397 Gene3D:1.25.40.10 eggNOG:COG5107
HOGENOM:HOG000010277 HOVERGEN:HBG082194 OrthoDB:EOG49GKG9
EMBL:AK017379 EMBL:AK154170 EMBL:AK168462 EMBL:BC029153
IPI:IPI00170040 IPI:IPI00761305 UniGene:Mm.283339
ProteinModelPortal:Q8K2Z2 SMR:Q8K2Z2 STRING:Q8K2Z2
PhosphoSite:Q8K2Z2 PaxDb:Q8K2Z2 PRIDE:Q8K2Z2 UCSC:uc007nqw.1
UCSC:uc007nra.1 InParanoid:Q8K2Z2 ChiTaRS:PRPF39
Genevestigator:Q8K2Z2 GermOnline:ENSMUSG00000035597 Uniprot:Q8K2Z2
Length = 665
Score = 459 (166.6 bits), Expect = 5.5e-41, P = 5.5e-41
Identities = 139/470 (29%), Positives = 222/470 (47%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V +Y RIL P Q +F FKE
Sbjct: 190 FEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHV 249
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T +G + ++ P E S P +TE E
Sbjct: 250 QNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDD--LPSGIEDIS-PAKL-ITEIEN 305
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTE-LENWHNYLDFIERDG 218
+ + I + +EM+ + SK FE I+RPYFHVKPL + +NW YL+F +G
Sbjct: 306 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQPKKNWKEYLEFEIENG 365
Query: 219 DFNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLF 278
+VV L+ERC+I+CA Y E+WI+Y ME + S++ + +RA V + + P H+
Sbjct: 366 THERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHML 424
Query: 279 AARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIE 338
A F+EQ G+I+ AR + E GL ++ ++ERR GN+E+A L + AI
Sbjct: 425 WAAFEEQQGNINEARIILRTFE-ECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNA 483
Query: 339 KGKEHSQTLPMLYA-QYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQS 397
K S YA + +R L + +N K+R++L+++++ + + L L+ E
Sbjct: 484 KSNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCD 539
Query: 398 SPKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEFLGLFG-DAQLIKKAEDRHA 456
+ + + DK + + ++R+ +EFL FG D + A D H
Sbjct: 540 LKQNEENILNCFDKAIHGSLPIKMRITFSQRK------VEFLEDFGSDVNKLLNAYDEHQ 593
Query: 457 RLFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSSQ 506
L L + T KR AE+ SE + K+++ S AQ + G ++Q
Sbjct: 594 TL-LKEQDTL---KRKAEN--GSEEPEEKKAHTEDLSSAQIIDGDLQANQ 637
>ASPGD|ASPL0000046692 [details] [associations]
symbol:AN1635 species:162425 "Emericella nidulans"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005685 "U1 snRNP"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003107 InterPro:IPR011990 SMART:SM00386 EMBL:BN001307
GO:GO:0005622 GO:GO:0006396 eggNOG:COG0457 Gene3D:1.25.40.10
EMBL:AACD01000026 KO:K13217 HOGENOM:HOG000189748 OMA:ARYFERY
OrthoDB:EOG4DNJD8 RefSeq:XP_659239.1 ProteinModelPortal:Q5BCU5
EnsemblFungi:CADANIAT00008273 GeneID:2874721 KEGG:ani:AN1635.2
Uniprot:Q5BCU5
Length = 588
Score = 329 (120.9 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 106/380 (27%), Positives = 177/380 (46%)
Query: 151 VSAGLTEAEELEKYIAVRE-----EMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELE 205
V+ G E+E+ + +R E++ K + +K +E+ I+RPYFHV L +L
Sbjct: 219 VAPGAKADAEIERDLRLRLDGYHLEIFSKTQTETTKRWTYESEIKRPYFHVTELDEGQLA 278
Query: 206 NWHNYLDFIERDGDFNKVVKLYERCLIACANYPEYWIRYVLCMEAS-GSMDLAHNALARA 264
NW YLDF E +G + ++ LYERCL+ CA+Y E+W RY M A G + N RA
Sbjct: 279 NWRKYLDFEEAEGSYARIQFLYERCLVTCAHYDEFWQRYARWMSAQPGKEEDVRNIYQRA 338
Query: 265 THVFVKRL-PEIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGN 323
++++V P L A F+E G + A+ ++ + P +E I+ ANM RR G
Sbjct: 339 SYLYVPIANPATRLQYAYFEEMCGRVSVAKEIHEAILINI-PNHVETIVSLANMCRRHGG 397
Query: 324 LEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSK 383
LE A +Y+ + + + T L A+++R L + + E+ARQ+ + + S+
Sbjct: 398 LEAAIEVYKSQL--DSPQCEMSTKAALVAEWARLLWKIKGSTEEARQVFQKNQQYYLDSQ 455
Query: 384 PLLEALIHFE-----SIQSSPKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEF 438
+ + FE S + Q + ++Q+V+ S S ++N A +L +++ +
Sbjct: 456 AFWHSYLTFELDQPTSAATESAQYERIKQVVEDI---RSKSALSSNVAR--DLVQIYMVY 510
Query: 439 LGLFGDAQLIKKAEDRHARLFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAP----SP 494
L G K+ + P S S+ + E S A + AP +P
Sbjct: 511 LLERGTQDAAKEYMTLDREVHGP-ASVSKAKTGGTEP--VSHTAPQVPPVTPAPPIIPTP 567
Query: 495 AQSLMGAYPSSQNPWAAGYG 514
+ YP Q+P GYG
Sbjct: 568 QVNPYNYYPQ-QSPVNGGYG 586
Score = 178 (67.7 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 40 LFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEF 99
LFERG VG D+LS P WDKYIEYE + + ++ I R++E P+ Q RYF +++
Sbjct: 131 LFERGANCVGLDFLSHPFWDKYIEYEERVEGYDKIFAILARVIEIPMHQYARYFERYRQL 190
Query: 100 AASRPLSEL 108
A +RP++EL
Sbjct: 191 AQTRPVAEL 199
Score = 44 (20.5 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 53 LSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRY--FSSFK 97
L F W KY + E+ M+Y R + + +D + + +FK
Sbjct: 72 LLFGYWKKYADLEFSITGTEAADMVYERGVASISSSVDLWTNYCTFK 118
>TAIR|locus:2173567 [details] [associations]
symbol:AT5G60980 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0009737 "response to abscisic acid stimulus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AB008269 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
EMBL:AY062108 EMBL:BT003010 IPI:IPI00529722 RefSeq:NP_200906.2
UniGene:At.27353 ProteinModelPortal:Q9FME2 SMR:Q9FME2 IntAct:Q9FME2
STRING:Q9FME2 PRIDE:Q9FME2 EnsemblPlants:AT5G60980.2 GeneID:836219
KEGG:ath:AT5G60980 TAIR:At5g60980 HOGENOM:HOG000239086
InParanoid:Q9FME2 OMA:AQESHER PhylomeDB:Q9FME2
ProtClustDB:CLSN2680580 Genevestigator:Q9FME2 Uniprot:Q9FME2
Length = 460
Score = 265 (98.3 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 69/177 (38%), Positives = 106/177 (59%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVD-GDSTESASSMLDIHSLVISL---NF 626
VG FV QYY +L Q P LVH+FY D+S + R D + + ++M I+ ++SL ++
Sbjct: 15 VGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQAINDKILSLKYEDY 74
Query: 627 TAIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFL 686
TA EI+T ++ S GV+V+V+G + + R+ KF Q+FFLAPQ+KGYFVLND+F FL
Sbjct: 75 TA-EIETADAQESHERGVIVLVTGRLTGNDNVRK-KFSQSFFLAPQDKGYFVLNDVFRFL 132
Query: 687 DEEPVYQHPAPV-LSENKFDVQHDASSPIPEQAGLAASDYVLEEEAREYVSSVHIED 742
+E+ V V ++ DVQ +PI + + + + +E E V+S+ ED
Sbjct: 133 EEKEVTAQARSVPINGTTRDVQ----APIEPERVVVSHEPEVEPEP---VASIEEED 182
Score = 224 (83.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 60/162 (37%), Positives = 87/162 (53%)
Query: 801 RKTYASILRVSKSQSTSFVATQPSFTKTASTTSDWNPAPQPTTQQSNYTSSFVPESGVSS 860
+ +YASIL+ KS P+ T A P P P Q+ P + ++
Sbjct: 227 KHSYASILKQMKSSPA------PT-THVARN----KPRPAPVNQKLT-----APPAEPAA 270
Query: 861 HMPESGFEAVDDSLGLD-EGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRK 919
S E V +S +D E + S+YVRNLP T ++EE F+NFG IK +G+ VR+ K
Sbjct: 271 RPEASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNK 330
Query: 920 DVVGVCYAFVEFEDISGVQNAIQASPIQLAGRQVYIEERRPN 961
G C+ FVEFE SG Q+A++ASP+ + RQ +EE++ N
Sbjct: 331 QQ-GFCFGFVEFETSSGKQSALEASPVTIGDRQAVVEEKKTN 371
>POMBASE|SPBC4B4.09 [details] [associations]
symbol:usp105 "U1 snRNP-associated protein Usp105"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=ISO] [GO:0000395 "mRNA 5'-splice site
recognition" evidence=IC;ISO] [GO:0005685 "U1 snRNP" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
[GO:0030627 "pre-mRNA 5'-splice site binding" evidence=ISO]
InterPro:IPR003107 SMART:SM00386 PomBase:SPBC4B4.09 EMBL:CU329671
GenomeReviews:CU329671_GR eggNOG:COG0457 GO:GO:0000243
GO:GO:0005685 GO:GO:0000395 KO:K13217 PIR:T40481 RefSeq:NP_596426.1
ProteinModelPortal:O74970 EnsemblFungi:SPBC4B4.09.1 GeneID:2540869
KEGG:spo:SPBC4B4.09 HOGENOM:HOG000189748 OMA:ARYFERY
OrthoDB:EOG4DNJD8 NextBio:20801985 Uniprot:O74970
Length = 612
Score = 416 (151.5 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 105/341 (30%), Positives = 169/341 (49%)
Query: 40 LFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEF 99
LF +G VG D+LS P WDKY+E+E Q+ V + R++ P+ Q RYF F +
Sbjct: 129 LFMQGANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIHIPLHQYARYFERFVQV 188
Query: 100 AASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAE 159
+ S+P+ +L P++ V A +++ + E E E
Sbjct: 189 SQSQPIQQLLPPDVLASIRADVTREPAKV---VSAGSKQITVERGELE--------IERE 237
Query: 160 ELEKYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + ++++K + +K FE+ I+RPYFHVK L +L NW YLDF E +GD
Sbjct: 238 MRARIYNIHLQIFQKVQLETAKRWTFESEIKRPYFHVKELDEAQLVNWRKYLDFEEVEGD 297
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCMEASGS-MDLAHNALARATHVFVK-RLPEIHL 277
F ++ LYERCLI CA Y E+W RY M A ++ RA+ +F P I +
Sbjct: 298 FQRICHLYERCLITCALYDEFWFRYARWMSAQPDHLNDVSIIYERASCIFASISRPGIRV 357
Query: 278 FAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLG---NLEDAFSLYEQA 334
A F+E G+I A+A YQ + T+ PG LEA++ +ERR +L +A ++
Sbjct: 358 QYALFEESQGNIASAKAIYQSILTQL-PGNLEAVLGWVGLERRNAPNYDLTNAHAVLRSI 416
Query: 335 IAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDS 375
I +GK ++ +L + + + + + E AR + + +
Sbjct: 417 I--NEGKCNTGITEVLITEDIKLVWKIEGDIELARNMFLQN 455
>FB|FBgn0039600 [details] [associations]
symbol:CG1646 species:7227 "Drosophila melanogaster"
[GO:0005685 "U1 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
SMART:SM00386 InterPro:IPR001623 EMBL:AE014297 Gene3D:1.25.40.10
SMART:SM00271 GO:GO:0000398 GO:GO:0000381 eggNOG:COG5107
GO:GO:0005685 GeneTree:ENSGT00390000005033 KO:K13217 EMBL:AY051737
RefSeq:NP_001097957.1 RefSeq:NP_001097958.1 RefSeq:NP_651634.1
RefSeq:NP_733256.2 RefSeq:NP_788753.1 RefSeq:NP_788754.2
UniGene:Dm.31288 ProteinModelPortal:Q7KRW8 SMR:Q7KRW8 IntAct:Q7KRW8
MINT:MINT-820225 STRING:Q7KRW8 PaxDb:Q7KRW8 PRIDE:Q7KRW8
EnsemblMetazoa:FBtr0085322 GeneID:43399 KEGG:dme:Dmel_CG1646
UCSC:CG1646-RB FlyBase:FBgn0039600 InParanoid:Q7KRW8 OMA:IRWENES
OrthoDB:EOG4ZKH2F PhylomeDB:Q7KRW8 GenomeRNAi:43399 NextBio:833726
Bgee:Q7KRW8 Uniprot:Q7KRW8
Length = 1066
Score = 343 (125.8 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 111/360 (30%), Positives = 169/360 (46%)
Query: 162 EKYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGDFN 221
++ I+ R +++K + FE I+RPYFHVKPL +L+NW +YLDF GD
Sbjct: 663 DRAISARRKVHKLTVSAVTARWSFEEGIKRPYFHVKPLERAQLKNWKDYLDFEIEKGDRE 722
Query: 222 KVVKLYERCLIACANYPEYWI---RYVLCME-ASGSMDLAHNALARATHVFVKRLPEIHL 277
+V+ L+ERCLIACA Y E+W+ RY+ +E SG +DL + RA + P +HL
Sbjct: 723 RVLVLFERCLIACALYDEFWLKMLRYLESLEDQSGVVDLVRDVYRRACRIHHPDKPSLHL 782
Query: 278 FAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAI 337
A F+E + D A Q + + P LL+ + N+ERR G L+ LY+ I
Sbjct: 783 MWAAFEECQMNFDDAAEILQRID-QRCPNLLQLSYRRINVERRRGALDKCRELYKHYIES 841
Query: 338 EKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSKPLLEALIHFESIQS 397
K K + +L + YA RFL+ + + + L +L+ + + AL +
Sbjct: 842 TKNKGIAGSLAIKYA---RFLNKICHDLDAGLAALQQALERDPANTRV--ALQMIDLCLQ 896
Query: 398 SPKQIDFLE--QLVDKFLMSNSDSPSTANA-AEREELSCVFLEFLGLFGDAQLIKKAEDR 454
PK +D E +++DKF+ P A+R+ +EFL FG + +D
Sbjct: 897 RPK-VDEQEVVEIMDKFMARADIEPDQKVLFAQRK------VEFLEDFGSTA--RGLQDA 947
Query: 455 HARLFLPHRSTSELRKRHAEDFLASERAKMAKSYSGAPSPAQSLMGAYPSSQNPWA-AGY 513
L E +K+ D S K + S P P S AY + + A AGY
Sbjct: 948 QRALQQALTKAKEAQKK--SD--GSPSRKNSSSSKEGPVPTGSAAAAYNNGGSAAAVAGY 1003
Score = 105 (42.0 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKE 98
+ER + G ++ S LWD YI +E + + RV IY R+L P Q + +F +F++
Sbjct: 472 YERAVKACGLEFRSDKLWDAYIRWENESKRYHRVVQIYDRLLAIPTQGYNGHFDNFQD 529
Score = 52 (23.4 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 37 CFRLFERGLAYVGTDYLSFPLWDKYI 62
C+++FERGL + LS LW Y+
Sbjct: 432 CYKVFERGLEAIP---LSVDLWIHYL 454
>TAIR|locus:2152566 [details] [associations]
symbol:AT5G48650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 EMBL:BT002864 EMBL:BT005640 IPI:IPI00523841
RefSeq:NP_199676.2 UniGene:At.29836 ProteinModelPortal:Q84JH2
SMR:Q84JH2 IntAct:Q84JH2 STRING:Q84JH2 PaxDb:Q84JH2 PRIDE:Q84JH2
EnsemblPlants:AT5G48650.1 GeneID:834922 KEGG:ath:AT5G48650
TAIR:At5g48650 eggNOG:NOG292401 InParanoid:Q84JH2 OMA:FNANIDM
PhylomeDB:Q84JH2 ProtClustDB:CLSN2918367 ArrayExpress:Q84JH2
Genevestigator:Q84JH2 Uniprot:Q84JH2
Length = 458
Score = 207 (77.9 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 60/181 (33%), Positives = 87/181 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDST-ESASSMLDIHSLVISLNF--- 626
VGS FV QYY + P+ + +FY + S + RV D S+ I + L +
Sbjct: 16 VGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTYGDC 75
Query: 627 TAIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFL 686
+ EI + ++ S NGG L+ V+G E RR KF QTFFLAPQEKG+FVLNDI F+
Sbjct: 76 NSAEITSYDTQESHNGGFLLFVTGYFTLNERSRR-KFTQTFFLAPQEKGFFVLNDILRFV 134
Query: 687 DEEPVYQHPAPVLSENKFDVQHDASSPIPEQAGLAASDYVLEEEAREYVSSVHIEDDATD 746
+++ P + E + + I G + V + VS ++A D
Sbjct: 135 NDDAKDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVSKPLDNENAKD 194
Query: 747 N 747
N
Sbjct: 195 N 195
Score = 186 (70.5 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 50/163 (30%), Positives = 80/163 (49%)
Query: 801 RKTYASILRVSKSQSTSFVATQPSFTKTASTTSDWNPAPQPTTQ----QSNYTSSFVPES 856
+K+YAS+L+V+K + + PS K P+ T Q Q SS P
Sbjct: 234 KKSYASVLKVTKDKFGVPAVSLPSPKKIPKDQEHQAPSDPSTGQILKDQGQQASSD-PSQ 292
Query: 857 GVSSHMPESGFEAVDDSLGLDE-GEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFV 915
+ S +A ++ + E S+YVR+LP +E EF+ FG I G+ V
Sbjct: 293 VIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAEFKQFGAITNGGIQV 352
Query: 916 RNRKDVVGVCYAFVEFEDISGVQNAIQASPIQLAGRQVYIEER 958
N++ + G Y FVEFE+ AI+ASP+++ G + ++EE+
Sbjct: 353 INQRGL-GYPYGFVEFEEADAAHRAIEASPVKIGGLRAFVEEK 394
Score = 38 (18.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 726 VLEEEAREYVSSVHIEDDATDNY 748
+ E AR ++ + DD+ NY
Sbjct: 201 IANEVARTEITCKEVADDSQKNY 223
>UNIPROTKB|E2RPB9 [details] [associations]
symbol:PRPF39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
SMART:SM00386 GO:GO:0005622 GO:GO:0006396
GeneTree:ENSGT00390000005033 EMBL:AAEX03005706
Ensembl:ENSCAFT00000022296 Uniprot:E2RPB9
Length = 299
Score = 320 (117.7 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 71/210 (33%), Positives = 105/210 (50%)
Query: 41 FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA 100
FE + GTD+ S LW+ YI +E Q V IY RIL P Q +F FKE
Sbjct: 71 FEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQRFKEHV 130
Query: 101 ASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEE 160
+ +L T +G + ++ P E + P +TE E
Sbjct: 131 QNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDD--LPSGIEDITDPAKL-ITEIEN 187
Query: 161 LE-KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGD 219
+ + I + +EM+ + SK FE I+RPYFHVKPL +L+NW YL+F +G
Sbjct: 188 MRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGT 247
Query: 220 FNKVVKLYERCLIACANYPEYWIRYVLCME 249
+VV L+ERC+I+CA Y E+WI+ ++C++
Sbjct: 248 HERVVVLFERCVISCALYEEFWIKEMVCLQ 277
>UNIPROTKB|G4MRU5 [details] [associations]
symbol:MGG_04558 "Pre-mRNA-processing factor 39"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003107 SMART:SM00386
GO:GO:0005622 GO:GO:0006396 EMBL:CM001231 KO:K13217
RefSeq:XP_003710923.1 ProteinModelPortal:G4MRU5
EnsemblFungi:MGG_04558T0 GeneID:2677921 KEGG:mgr:MGG_04558
Uniprot:G4MRU5
Length = 586
Score = 333 (122.3 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 100/321 (31%), Positives = 153/321 (47%)
Query: 144 TEQTSKPVSAGLTEAE-ELE-----KYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVK 197
TE ++ + G+T+ E E E K A E++ K + +K +E I+RPYFHV
Sbjct: 211 TEIEAEAAAYGVTKTEPEFEQEMRRKVDAHYGEIFTKTQTEVTKRWLYEAEIKRPYFHVT 270
Query: 198 PLSVTELENWHNYLDFIERDGDFNKVVKLYERCLIACANYPEYWIRYVLCMEAS-GSMDL 256
L EL NW YLDF E +G F + LYERCL+ CA Y E+W RY M A +
Sbjct: 271 ELEKKELSNWRKYLDFEEAEGSFVRTAFLYERCLVTCAFYDEFWFRYARWMSAQPDKTEE 330
Query: 257 AHNALARATHVFVK-RLPEIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHA 315
N RA +FV P I L A F+E G + AR + + PG +E II A
Sbjct: 331 VRNIYLRAATIFVPISRPGIRLQFAYFEESCGRVAMAREVHNAILLRL-PGCIEVIISLA 389
Query: 316 NMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDS 375
N+ERR +++ A + +Q I E + T +L +++ L V AE+AR + +
Sbjct: 390 NLERRHNDIDTAIEVLKQQI--ESPEVDIWTKAVLVTEWASLLWTVKGTAEEARAVFQKN 447
Query: 376 LDHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVF 435
S+ I FE Q + +++ + ++ + S ++A ++EL V+
Sbjct: 448 AQWYGGSRHFWMQWIQFELEQPTSAELEAQHSERLREIIDKIRTESNMSSAAKKELCGVY 507
Query: 436 LEFLGLFGDAQLIKK--AEDR 454
L +L G +K+ A DR
Sbjct: 508 LAYLQHRGGKDAMKQFLAIDR 528
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 56/208 (26%), Positives = 88/208 (42%)
Query: 40 LFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEF 99
LFERG A VG D+++ P W+KY+EYE Q+ + I R++ P+ Q RY+ F
Sbjct: 132 LFERGAACVGLDFMAHPFWNKYLEYEERQEAHENIFKILQRVIHIPMYQYARYYERFSTM 191
Query: 100 AASRPL-----SELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDA------TEQTS 148
+R L +EL+ ++T E + E + DA T+ +
Sbjct: 192 VHTRALDDVVSAELQARFKTEIEAEAAAYGVTKTEPEFE-QEMRRKVDAHYGEIFTKTQT 250
Query: 149 KPVSAGLTEAEELEKYIAVREEMYKKAKEFDSKIIGFETA----IRRPYFHVKPLSVTEL 204
+ L EAE Y V E + KK K + FE A +R + + + L
Sbjct: 251 EVTKRWLYEAEIKRPYFHVTE-LEKKELSNWRKYLDFEEAEGSFVRTAFLYERCLVTCAF 309
Query: 205 --ENWHNYLDFIERDGDFNKVVK-LYER 229
E W Y ++ D + V+ +Y R
Sbjct: 310 YDEFWFRYARWMSAQPDKTEEVRNIYLR 337
Score = 46 (21.3 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 53 LSFPL----WDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRY--FSSFK 97
L FPL W KY + E+ M+Y R + +D + + SFK
Sbjct: 69 LKFPLLFGYWKKYADLEFTIAGPESAEMVYERGCASITNSVDLWTEYCSFK 119
>TAIR|locus:2023854 [details] [associations]
symbol:AT1G13730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
GO:GO:0006810 EMBL:AC027656 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
HOGENOM:HOG000239086 EMBL:AY058169 EMBL:AY140039 EMBL:BT006581
IPI:IPI00531419 PIR:F86270 RefSeq:NP_563932.1 UniGene:At.15556
ProteinModelPortal:Q9LMX6 SMR:Q9LMX6 IntAct:Q9LMX6 STRING:Q9LMX6
PaxDb:Q9LMX6 PRIDE:Q9LMX6 EnsemblPlants:AT1G13730.1 GeneID:837933
KEGG:ath:AT1G13730 TAIR:At1g13730 eggNOG:NOG331084
InParanoid:Q9LMX6 OMA:DIAHEES PhylomeDB:Q9LMX6
ProtClustDB:CLSN2687795 ArrayExpress:Q9LMX6 Genevestigator:Q9LMX6
Uniprot:Q9LMX6
Length = 428
Score = 206 (77.6 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 47/124 (37%), Positives = 74/124 (59%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTE-SASSMLDIHSLVISLNF--T 627
+G+ FV +YY +L + P VHQFY D S + R D S S+ I+ ++S ++ +
Sbjct: 15 IGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLKAINEQIMSFDYEIS 74
Query: 628 AIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFLD 687
I+I T +S S+ GV+ +V+G + KE +R +F Q+FFL P YFVLND+F ++
Sbjct: 75 KIQILTADSQASYMNGVVTLVTGLLTVKEG-QRMRFSQSFFLVPLNGSYFVLNDVFRYVA 133
Query: 688 EEPV 691
+E V
Sbjct: 134 DEIV 137
Score = 140 (54.3 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 42/128 (32%), Positives = 64/128 (50%)
Query: 837 PAPQPTTQQSNYTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVTAF 896
P +P T+ S S P + VS H S +D + E +++V NL T
Sbjct: 241 PKSKPVTKPSAARESKAP-APVSEH---SSAATIDQ-----QAEGYTIFVANLLMDATPE 291
Query: 897 EIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA---SPIQLAGRQV 953
++ E F+ FG I DG+ VR+ + + G C+ FV F V+ +QA S I++ R+V
Sbjct: 292 QLNETFKGFGAITKDGIQVRSYR-LKGNCFGFVTFASAEAVKLVLQAHKESAIRIGNRRV 350
Query: 954 YIEERRPN 961
IEE+R N
Sbjct: 351 SIEEKRGN 358
Score = 45 (20.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 837 PAPQPTTQQSNYTSSFVPESGVSSHMPESGFEAV--DDSLGLD 877
P QP +Q+ + PE V++ P++ + V D S G+D
Sbjct: 170 PTQQPEAKQTTENTVKKPERAVANGHPKTQEDNVVNDKSNGVD 212
>POMBASE|SPBP8B7.11 [details] [associations]
symbol:nxt3 "ubiquitin protease cofactor Glp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0060628 "regulation of ER to Golgi vesicle-mediated transport"
evidence=ISO] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
PomBase:SPBP8B7.11 GO:GO:0005829 GO:GO:0000166 EMBL:CU329671
Gene3D:3.30.70.330 GenomeReviews:CU329671_GR GO:GO:0003723
GO:GO:0051028 GO:GO:0060628 GO:GO:0016579 OrthoDB:EOG4N33ZJ
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333 PIR:T40805
RefSeq:NP_596518.1 ProteinModelPortal:O94260 IntAct:O94260
STRING:O94260 PRIDE:O94260 EnsemblFungi:SPBP8B7.11.1 GeneID:2541364
KEGG:spo:SPBP8B7.11 OMA:ATENNFA NextBio:20802473 Uniprot:O94260
Length = 434
Score = 253 (94.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 66/183 (36%), Positives = 102/183 (55%)
Query: 570 QVGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVD-GDSTESASSMLDIHSLVISLNFT- 627
++G FV +YY L ++P+ +H FY+ S++I D G+S +IH+ ++ L+F
Sbjct: 17 EIGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIHGDEGESISLCHGQQEIHNKILDLDFQN 76
Query: 628 -AIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFL 686
+ I ++SL S NGG+++ V G + K R KF QTFFLA Q GYFVLNDIF FL
Sbjct: 77 CKVLISNVDSLASSNGGIVIQVLGEMSNKGKLSR-KFAQTFFLAEQPNGYFVLNDIFRFL 135
Query: 687 DEEPVYQHPAP-VLSENKFDVQHDASSPIPEQAGLAASDYVLEEEAREYVSSVHIEDDA- 744
E+ + +P + + K DV AS P G+ + +++ A+E H +D A
Sbjct: 136 REDVEEEEESPDAVEKEKKDV---ASEPYVN--GVQSQEHL--PSAKE---EGHYQDPAA 185
Query: 745 TDN 747
T+N
Sbjct: 186 TEN 188
Score = 74 (31.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 883 SVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQ 942
SV+V+N+P + ++ FG +K F R RK A+V+F + VQ A+
Sbjct: 316 SVFVKNIPPETSDVSLKSAMSIFGPVKAIE-FAR-RKGT-----AYVDFVNHECVQLALN 368
Query: 943 ASPIQLAGRQVYIEERR 959
+Q+ + IEERR
Sbjct: 369 KKTLQINNATLNIEERR 385
Score = 38 (18.4 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 819 VATQPSFTKTASTTSDW-NPAPQPTTQQSN--YT-SSFVPESGV--SSHMPESGFEAVDD 872
V +Q S + TASTT TQQ YT S+ + E+ V + PE+ ++
Sbjct: 274 VKSQASVSSTASTTGQTVKGVNADQTQQPTAPYTQSNELLETSVFVKNIPPETSDVSLKS 333
Query: 873 SLGLDEGEVKSV 884
++ + G VK++
Sbjct: 334 AMSIF-GPVKAI 344
Score = 37 (18.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 18/82 (21%), Positives = 39/82 (47%)
Query: 807 ILRVSKSQSTSFVATQPSFTKTASTTSDWNPAPQPTTQQSNYTSSFVPESG---VSSHMP 863
+++V+++ SFV+ Q + + + TS+ A +N ++ P+S ++ + P
Sbjct: 215 VIQVTEASVPSFVSQQENQLQDEALTSNSKNADAIGASDANVATA--PKSWADLIARNHP 272
Query: 864 ESGFEAVDDSLGLDEGE-VKSV 884
+ +A S G+ VK V
Sbjct: 273 DVKSQASVSSTASTTGQTVKGV 294
>TAIR|locus:2098555 [details] [associations]
symbol:AT3G07250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0009506 EMBL:CP002686 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR012463 Pfam:PF07897 InterPro:IPR018222 PROSITE:PS50177
IPI:IPI00518200 RefSeq:NP_187381.2 UniGene:At.53212
ProteinModelPortal:F4JED3 SMR:F4JED3 PRIDE:F4JED3
EnsemblPlants:AT3G07250.1 GeneID:819913 KEGG:ath:AT3G07250
Uniprot:F4JED3
Length = 1294
Score = 178 (67.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAIE 630
VG F QYY LQ P+ +++ Y D S++ R D T ++ +F +++
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLKWRSPGSFDSVK 340
Query: 631 IKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFLD--E 688
I ++ S S G+LV+V G + E R F Q FFL PQEKGY V D+F F+D E
Sbjct: 341 ITSVTSQDSLKQGILVVVYGYLTFNERPARH-FTQVFFLVPQEKGYIVCTDMFRFVDIPE 399
Query: 689 EPVYQHPAPVLSENKFDVQHDASSPIPE 716
PA + E K A+ + E
Sbjct: 400 ANAAIPPANDVIEEKVPETEGAALRVSE 427
Score = 162 (62.1 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 40/119 (33%), Positives = 62/119 (52%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLN---FT 627
+ ++F YY LQ P+++ +Y D S + R D T +S++ DI + L+ F
Sbjct: 944 IAAFFSEHYYNNLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFD 1003
Query: 628 AIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFL 686
++E+ ++ S S + G+ V V G E R F Q F APQEKG FV D+F F+
Sbjct: 1004 SVEVTSVMSQDSHDKGIRVAVDGYFTFNER-PARNFTQNFTFAPQEKGLFVSTDMFKFV 1061
Score = 160 (61.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 48/155 (30%), Positives = 75/155 (48%)
Query: 813 SQSTSFVATQPSFTKTASTTSD----WNPAPQPTTQQSNYTSSFVP-ESGVSSHMPESGF 867
S + V +Q S K D +N P Q N+T F P E G+ F
Sbjct: 1004 SVEVTSVMSQDSHDKGIRVAVDGYFTFNERPARNFTQ-NFT--FAPQEKGLFVSTDMFKF 1060
Query: 868 EAVDDSLG-LDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCY 926
+ ++ + ++ V+NLP T +E F+ FG I+ GV VRN++ Y
Sbjct: 1061 VGIPEANATIPPANNAAICVKNLPLNATIALVENAFKQFGEIRRGGVEVRNKRSF---SY 1117
Query: 927 AFVEFEDISGVQNAIQASPIQLAGRQVYIEERRPN 961
FVEF++ + Q AI+ASP+ + R VY+E++RP+
Sbjct: 1118 GFVEFKEENAAQRAIKASPVTIDLRSVYVEKKRPD 1152
Score = 142 (55.0 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 38/109 (34%), Positives = 55/109 (50%)
Query: 853 VPES-GVSSHM--PESGFEAVDDSLGLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIK 909
VPE+ G + + P GF+ V EG ++ + LP T +E F+ FG I+
Sbjct: 415 VPETEGAALRVSEPNHGFDNVPKLSCASEGA--AICAKKLPLDATIAFVENAFKQFGEIR 472
Query: 910 PDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQASPIQLAGRQVYIEER 958
GV VR G YA+VEFE+ AI ASPI + G + Y+E++
Sbjct: 473 RGGVEVRINWHCTGK-YAYVEFEEAEAANRAIMASPISIDGYRTYVEKK 520
Score = 137 (53.3 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+ V++LP T +E F+ FG IK + V N + YAFVEFE+ + AIQA
Sbjct: 552 IRVKDLPPNATVALVESVFKQFGPIKKGRIRVINPANS-NYWYAFVEFEEADAAKRAIQA 610
Query: 944 SPIQLAGRQVYIEERRP 960
SP+ + G Y+E+++P
Sbjct: 611 SPLNVDGHTTYVEQKQP 627
Score = 94 (38.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 883 SVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAI- 941
+V+V+NLP VT +E F+ FG IK GV V NR VG + V+F + + A+
Sbjct: 1197 AVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQVSNRG--VGNWFGNVKFVHAAAAERAVN 1254
Query: 942 -QASPIQLAG 950
Q I L G
Sbjct: 1255 PQVLLIMLPG 1264
Score = 92 (37.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 870 VDDSLGLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFV 929
+ + G + E SV+++ LP VT IE+ + FG I + K +AFV
Sbjct: 734 IQEEEGTESHEA-SVFLKRLPLDVTFALIEDALKKFGPINAISII----KSGPLYKFAFV 788
Query: 930 EFEDISGVQNAIQASPIQLAGRQVYIEER 958
+FE AI ASP+++ + V ++++
Sbjct: 789 DFEKADVANRAIMASPVRICEKNVNVQKK 817
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 244 YVLCMEASGSMDL--AHNALARATHVFVKRLPEIHLFAARFKEQNGDID 290
Y++C + +D+ A+ A+ A V +++PE A R E N D
Sbjct: 385 YIVCTDMFRFVDIPEANAAIPPANDVIEEKVPETEGAALRVSEPNHGFD 433
>ASPGD|ASPL0000013038 [details] [associations]
symbol:AN8268 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:BN001302 OMA:YPIYIRG InterPro:IPR018222
PROSITE:PS50177 EMBL:AACD01000145 eggNOG:NOG324333
RefSeq:XP_681537.1 ProteinModelPortal:Q5ATW2
EnsemblFungi:CADANIAT00004328 GeneID:2868982 KEGG:ani:AN8268.2
HOGENOM:HOG000159527 OrthoDB:EOG4RR9T6 Uniprot:Q5ATW2
Length = 526
Score = 207 (77.9 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 57/174 (32%), Positives = 87/174 (50%)
Query: 551 QTSVPQNX-XXXXXXXXXXXQVGSYFVGQYYQVLQQQPDLVHQFYSDASSMI-RVDGDST 608
Q+S P N +VG YFV QYY + + PD +H FYS S ++ + +S
Sbjct: 39 QSSTPSNAPSNDQKNGISKDEVGWYFVEQYYTNMSRSPDKLHLFYSRRSQLVFGTEAESV 98
Query: 609 ESASSMLDIHSLVISLNFTAIEIKTIN--SLGSWNGGVLVMVSGSVKTKEFCRRRKFVQT 666
A I L+F +++ +N + S+ +L+ V G + K+ RKFVQT
Sbjct: 99 PVAVGQKAIQEKFKQLDFQDCKVRVLNVDAQASFEN-ILISVIGEISNKQE-PSRKFVQT 156
Query: 667 FFLAPQEKGYFVLNDIFHFL-DEEPVYQHPAPVLSENKFDVQHDASSPIPEQAG 719
F LA Q GY+VLND+F +L DEE V + A +S + + + + +P AG
Sbjct: 157 FVLAEQPNGYYVLNDVFRYLVDEEEVAEDAA--ISSDTVE-EPELQAPAQTAAG 207
Score = 111 (44.1 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 802 KTYASILRVSKSQSTSFVATQPSFTKTASTTSDWN----PAPQPTTQQSNYTSS----FV 853
KT+ASI + + + A + K A + + PAP P + + ++
Sbjct: 305 KTWASIASKTGAAAPVVPAIPVAPVKPAPAAAPASQPAAPAPAPASAAAAAPAAESGPSQ 364
Query: 854 PESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGV 913
P S S +G + + + Y++N+ V A ++E + +G++ V
Sbjct: 365 PSSNDGSGWQTAGHDHKKSQARASDNQAVLGYIKNVTEKVNADLLKETLERYGKLTHFDV 424
Query: 914 FVRNRKDVVGVCYAFVEFEDISGVQNAIQASPIQLAGRQVYIEERRP 960
+K+ C AF+EF D +G A+ A+P Q+ QV +EERRP
Sbjct: 425 --SRQKN----C-AFIEFADRAGYNAAVAANPHQIGTEQVKVEERRP 464
>DICTYBASE|DDB_G0283307 [details] [associations]
symbol:prpf39 "pre-mRNA processing factor 39"
species:44689 "Dictyostelium discoideum" [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003107 InterPro:IPR008847
InterPro:IPR011990 Pfam:PF05843 SMART:SM00386
dictyBase:DDB_G0283307 GO:GO:0005634 GenomeReviews:CM000153_GR
GO:GO:0006397 Gene3D:1.25.40.10 EMBL:AAFI02000052 KO:K13217
eggNOG:NOG298273 RefSeq:XP_639156.1 ProteinModelPortal:Q54R91
EnsemblProtists:DDB0233547 GeneID:8624026 KEGG:ddi:DDB_G0283307
InParanoid:Q54R91 OMA:ADHEYAH Uniprot:Q54R91
Length = 699
Score = 270 (100.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 80/298 (26%), Positives = 147/298 (49%)
Query: 144 TEQTSKPVSAGLTEAEELEKYIAVREEMYKKAKEFDSKIIGFETAI-RRPYFHVKPLSVT 202
TE+ K + +AE + + RE+ Y + E SK FE+ + +R +FH++P+
Sbjct: 198 TEEERKEYTG--YDAETKQMVLQNREKWYHETLEKISKRSNFESIVNKRFFFHIQPIDEM 255
Query: 203 ELENWHNYLDFIERDGDFNK--VVKLYERCLIACANYPEYWIRYVLCMEAS----GSMDL 256
L W +Y +++E D + V+KL+ERCL+ C Y E+W++Y+ ++ S +L
Sbjct: 256 TLSVWRSYFNYMESDPSVTQEEVIKLFERCLVPCCYYSEFWLKYIKFLQESYVGDNKNEL 315
Query: 257 AHNALARATHVFVKRLPEIHLFAARFKEQN-GDIDGARAAYQLVHTETSPGLLEAIIKHA 315
+ RAT +F+K+ +IHL + F E G+I+ A + + +H+ P LE I++
Sbjct: 316 IESIFERATKIFLKKRADIHLEYSLFVESTLGNIEKAFSILENIHS-LLPTHLEVILRLV 374
Query: 316 NMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFL--HLVSRNAEKARQILV 373
+ +RR +++ A +++ + + S+T P L Y FL + S EK +
Sbjct: 375 SFKRRNHSIQQANQFFKKVLT--SLQSDSKTYPFLSINYISFLLSNKQSLQGEKEGEEEA 432
Query: 374 DSL-DHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVDKFLMSNSDSPSTANAAEREE 430
D + D + S+ +L+ I S + F+ ++ L S S S+ E+ E
Sbjct: 433 DKIVDVFETSREVLKKSISLYP-DSKLLWLYFINFEINNLLFIISGSGSSEKRIEQIE 489
Score = 155 (59.6 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 69/275 (25%), Positives = 121/275 (44%)
Query: 40 LFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEF 99
+F+RG+ +GTDY S W+KYIE+E M QE + +A I+ IL+ P++ L + FK+
Sbjct: 129 VFKRGINIIGTDYQSGKFWEKYIEFE-MGQENNELASIFNSILKTPLENLQIFNEKFKDN 187
Query: 100 AASRPLSELRTXXXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAE 159
++++ T +ET V N E+ + E+ SK + +
Sbjct: 188 IDRIKINDMLTEEERKEYTGYD----AETKQMVLQNREKWYHETLEKISKRSNFESIVNK 243
Query: 160 ELEKYIAVREEM-------YKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLD 212
+I +EM Y E D + E I+ + P E W Y+
Sbjct: 244 RFFFHIQPIDEMTLSVWRSYFNYMESDPSVTQ-EEVIKLFERCLVPCCYYS-EFWLKYIK 301
Query: 213 FIERD--GDF-NKVVK-LYERCL-IACANYPEYWIRYVLCMEAS-GSMDLAHNALARATH 266
F++ GD N++++ ++ER I + + Y L +E++ G+++ A + L
Sbjct: 302 FLQESYVGDNKNELIESIFERATKIFLKKRADIHLEYSLFVESTLGNIEKAFSILENIHS 361
Query: 267 VFVKRLPEIHLFAARFKEQNGDIDGARAAYQLVHT 301
+ L E+ L FK +N I A ++ V T
Sbjct: 362 LLPTHL-EVILRLVSFKRRNHSIQQANQFFKKVLT 395
Score = 46 (21.3 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/59 (18%), Positives = 27/59 (45%)
Query: 53 LSFPLWDKYIEYEYMQQEWSRVAMIYTRILENPIQQLDRYFSSFKEFA-ASRPLSELRT 110
L F W ++ ++EY ++ I+ + + + +D + + S P+ E+R+
Sbjct: 70 LCFLYWKRFADHEYAHNNTTQSIEIFEKAVSSIPHSVDIWLNYCTHLIDKSYPVDEIRS 128
Score = 41 (19.5 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 307 LLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGK 341
LL I + E+R+ +E +Y A+ ++K K
Sbjct: 471 LLFIISGSGSSEKRIEQIERIKKVYNIALCLDKNK 505
Score = 37 (18.1 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 392 FESIQSSPKQIDFLEQLVDKFLMSNSDSPS-TAN 424
FES+ K L D L S+S S S T N
Sbjct: 587 FESLYPDGKPESKKRSLTDMNLQSSSSSSSSTTN 620
>TAIR|locus:2026423 [details] [associations]
symbol:AT1G69250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC008262 EMBL:AC018364
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000239086
EMBL:BT006208 IPI:IPI00537284 PIR:E96716 RefSeq:NP_177085.1
UniGene:At.25325 ProteinModelPortal:Q9LDI9 SMR:Q9LDI9 STRING:Q9LDI9
PRIDE:Q9LDI9 EnsemblPlants:AT1G69250.1 GeneID:843256
KEGG:ath:AT1G69250 TAIR:At1g69250 InParanoid:Q9LDI9 OMA:PIKENGI
PhylomeDB:Q9LDI9 ProtClustDB:CLSN2682528 Genevestigator:Q9LDI9
Uniprot:Q9LDI9
Length = 427
Score = 170 (64.9 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 45/122 (36%), Positives = 69/122 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTE-SASSMLDIHSLVISLNF--T 627
+ + FV QYY VL Q P + Y DAS + R D T S +S+ I+ ++S +F T
Sbjct: 13 IAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSCDFENT 72
Query: 628 AIEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFLD 687
E+ +++S S G+ +MV G + K+ +RRKF Q F+LA Q VLND+ ++D
Sbjct: 73 KFEVLSVDSQNSLEDGIFIMVIGFMTGKDN-QRRKFSQMFYLARQNT-LVVLNDMLRYVD 130
Query: 688 EE 689
+E
Sbjct: 131 QE 132
Score = 142 (55.0 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 817 SFVATQPSFTKTASTTSDWNPAPQPTTQQSNYTSSFVPESGVSSHMPESGFEAVD-DSLG 875
SF S K A+ +P P Q+ Y P + + P +++ +
Sbjct: 217 SFADIVGSMAKNAAPFQVKSPVQAPV-QKPKYVGQ--PRAAAAPQKPAYVSKSIKKNDQK 273
Query: 876 LDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRN-RKDVVGVCYAFVEFEDI 934
+ E S++V NLP ++ E F++FG IK +G+ VR+ R + VC+ F+ FE +
Sbjct: 274 VIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRGNANPVCFGFISFETV 333
Query: 935 SGVQNAIQAS---PIQLAGRQVYIEER 958
+ VQ+ +QA+ P LA R++ ++E+
Sbjct: 334 ASVQSVLQAAKNTPFMLADRKLRVKEK 360
>UNIPROTKB|I3LPH5 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:CU467763
RefSeq:XP_003357027.1 Ensembl:ENSSSCT00000026131 GeneID:100621975
KEGG:ssc:100621975 Uniprot:I3LPH5
Length = 448
Score = 198 (74.8 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 57/167 (34%), Positives = 87/167 (52%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPEQAGLAASDY 725
+F + DE V+ P L SE++ + + + P PE S Y
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEERQPTPEPVQETNSGY 174
Score = 92 (37.4 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 299 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 354
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 355 LIAKPIMFRGEVRLNVEEKK 374
Score = 41 (19.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 332 GVGGKLPNFGFVVFDDS 348
>UNIPROTKB|Q2KJ17 [details] [associations]
symbol:G3BP2 "GTPase activating protein (SH3 domain)
binding protein 2" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 OMA:MEQNESD
EMBL:DAAA02018118 EMBL:BC105567 IPI:IPI00708814
RefSeq:NP_001039920.1 UniGene:Bt.87528 STRING:Q2KJ17
Ensembl:ENSBTAT00000018663 GeneID:539249 KEGG:bta:539249
NextBio:20877877 Uniprot:Q2KJ17
Length = 449
Score = 195 (73.7 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEERQPSPE 165
Score = 92 (37.4 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 300 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 355
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 356 LIAKPIMFRGEVRLNVEEKK 375
Score = 44 (20.5 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 837 PAPQPTTQQSN--YTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVT 894
P+P+P + +N Y + +G+ + ES E + E E K+ ++
Sbjct: 162 PSPEPVQENANSGYYEAHPVTNGIEEPLEESSHEPEPEP----ESETKTEELKPPVEEKN 217
Query: 895 AFEIEEE 901
E+EE+
Sbjct: 218 LEELEEK 224
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 333 GVGGKLPNFGFVVFDDS 349
>RGD|1309571 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 RGD:1309571 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 EMBL:CH474060
EMBL:BC079225 IPI:IPI00464529 RefSeq:NP_001014011.1
UniGene:Rn.198360 MINT:MINT-7138399 STRING:Q6AY21
Ensembl:ENSRNOT00000003346 GeneID:305240 KEGG:rno:305240
UCSC:RGD:1309571 NextBio:654241 Genevestigator:Q6AY21
Uniprot:Q6AY21
Length = 449
Score = 194 (73.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEDRQPSPE 165
Score = 92 (37.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 300 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 355
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 356 LIAKPIMFRGEVRLNVEEKK 375
Score = 47 (21.6 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 834 DWNPAPQPTTQQSN--YTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPS 891
D P+P+P + +N Y + +G+ + ES E + E E K+ ++
Sbjct: 159 DRQPSPEPVQENANSAYYEAHPVTNGIEEPLEESSHEPEPEP----ESETKTEELKPQAE 214
Query: 892 TVTAFEIEEE 901
E+EE+
Sbjct: 215 EKHLEELEEK 224
Score = 41 (19.5 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 333 GVGGKLPNFGFVVFDDS 349
>UNIPROTKB|E2QYY6 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 CTD:9908
RefSeq:XP_855995.1 ProteinModelPortal:E2QYY6
Ensembl:ENSCAFT00000013317 GeneID:478429 KEGG:cfa:478429
NextBio:20853768 Uniprot:E2QYY6
Length = 449
Score = 195 (73.7 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEERQPSPE 165
Score = 92 (37.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 300 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 355
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 356 LIAKPIMFRGEVRLNVEEKK 375
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 333 GVGGKLPNFGFVVFDDS 349
Score = 40 (19.1 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 837 PAPQPTTQQ--SNYTSSFVPESGVSSHMPESGFE 868
P+P+P + S Y + +G+ + ES E
Sbjct: 162 PSPEPVQENADSGYYEAHPVANGIEEPLEESSHE 195
>UNIPROTKB|Q9UN86 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0007253 "cytoplasmic sequestering of NF-kappaB"
evidence=NAS] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=NAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=TAS] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=TAS] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007265 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0051056
GO:GO:0003723 EMBL:CH471057 GO:GO:0030159 GO:GO:0051028
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0007253 eggNOG:NOG324333
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AF145284 EMBL:AB014560 EMBL:AF051311 EMBL:AF053535
EMBL:AK291786 EMBL:BC011731 IPI:IPI00009057 IPI:IPI00179890
RefSeq:NP_036429.2 RefSeq:NP_987100.1 RefSeq:NP_987101.1
UniGene:Hs.303676 ProteinModelPortal:Q9UN86 SMR:Q9UN86
IntAct:Q9UN86 MINT:MINT-3082700 STRING:Q9UN86 PhosphoSite:Q9UN86
DMDM:116242482 PaxDb:Q9UN86 PRIDE:Q9UN86 Ensembl:ENST00000357854
Ensembl:ENST00000359707 Ensembl:ENST00000395719 GeneID:9908
KEGG:hsa:9908 UCSC:uc003hir.3 UCSC:uc003hit.3 CTD:9908
GeneCards:GC04M076567 HGNC:HGNC:30291 HPA:HPA018304 HPA:HPA018425
neXtProt:NX_Q9UN86 PharmGKB:PA162389134 InParanoid:Q9UN86
OMA:MEQNESD PhylomeDB:Q9UN86 GenomeRNAi:9908 NextBio:37365
ArrayExpress:Q9UN86 Bgee:Q9UN86 CleanEx:HS_G3BP2
Genevestigator:Q9UN86 GermOnline:ENSG00000138757 Uniprot:Q9UN86
Length = 482
Score = 195 (73.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEERQPSPE 165
Score = 92 (37.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 333 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 388
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 389 LIAKPIMFRGEVRLNVEEKK 408
Score = 45 (20.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 837 PAPQPTTQQSN--YTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVT 894
P+P+P + +N Y + +G+ + ES E + E E K+ ++
Sbjct: 162 PSPEPVQENANSGYYEAHPVTNGIEEPLEESSHEPEPEP----ESETKTEELKPQVEEKN 217
Query: 895 AFEIEEE 901
E+EE+
Sbjct: 218 LEELEEK 224
Score = 41 (19.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 366 GVGGKLPNFGFVVFDDS 382
>MGI|MGI:2442040 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360 EMBL:U65313
MGI:MGI:2442040 GO:GO:0005737 GO:GO:0007264 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0051028 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 OMA:MEQNESD
EMBL:AF145285 EMBL:AK145697 IPI:IPI00124245 IPI:IPI00331295
RefSeq:NP_001074263.1 RefSeq:NP_001074266.1 RefSeq:NP_035946.2
UniGene:Mm.290530 UniGene:Mm.473827 ProteinModelPortal:P97379
SMR:P97379 STRING:P97379 PhosphoSite:P97379 PaxDb:P97379
PRIDE:P97379 Ensembl:ENSMUST00000113127 Ensembl:ENSMUST00000164378
Ensembl:ENSMUST00000167918 Ensembl:ENSMUST00000169094 GeneID:23881
KEGG:mmu:23881 InParanoid:P97379 ChiTaRS:G3BP2 NextBio:303611
Bgee:P97379 Genevestigator:P97379 GermOnline:ENSMUSG00000029405
Uniprot:P97379
Length = 482
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEDRQPSPE 165
Score = 92 (37.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 333 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 388
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 389 LIAKPIMFRGEVRLNVEEKK 408
Score = 46 (21.3 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 834 DWNPAPQPTTQQSN--YTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPS 891
D P+P+P + +N Y + +G+ + ES E + E E K+ ++
Sbjct: 159 DRQPSPEPVQENANSAYYDAHPVTNGIEEPLEESSHEPEPEP----ESETKTEELKPQVE 214
Query: 892 TVTAFEIEEE 901
E+EE+
Sbjct: 215 EKHLEELEEK 224
Score = 41 (19.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 366 GVGGKLPNFGFVVFDDS 382
>UNIPROTKB|F6XCI1 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:MEQNESD Ensembl:ENSCAFT00000013317
EMBL:AAEX03016672 EMBL:AAEX03016673 Uniprot:F6XCI1
Length = 490
Score = 195 (73.7 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 19 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 78
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 79 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 137
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 138 MFRYEDE--VFGDSEPELDEESEDEVEEEQEERQPSPE 173
Score = 92 (37.4 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 341 LFVGNLPHDIDENELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 396
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 397 LIAKPIMFRGEVRLNVEEKK 416
Score = 41 (19.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 374 GVGGKLPNFGFVVFDDS 390
Score = 40 (19.1 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 837 PAPQPTTQQ--SNYTSSFVPESGVSSHMPESGFE 868
P+P+P + S Y + +G+ + ES E
Sbjct: 170 PSPEPVQENADSGYYEAHPVANGIEEPLEESSHE 203
>UNIPROTKB|D6RB17 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0005737 GO:GO:0006810
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000220838
HGNC:HGNC:30291 EMBL:AC104828 IPI:IPI00966366
ProteinModelPortal:D6RB17 SMR:D6RB17 Ensembl:ENST00000503660
ArrayExpress:D6RB17 Bgee:D6RB17 Uniprot:D6RB17
Length = 198
Score = 195 (73.7 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 55/158 (34%), Positives = 85/158 (53%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
+F + DE V+ P L SE++ + + + P PE
Sbjct: 130 MFRYEDE--VFGDSEPELDEESEDEVEEEQEERQPSPE 165
Score = 43 (20.2 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 837 PAPQPTTQQSN--YTSSFVPESGVSSHMPESGFE 868
P+P+P + +N Y + +G+ + ES E
Sbjct: 162 PSPEPVQENANSGYYEAHPVTNGIEEPLEESSHE 195
>ZFIN|ZDB-GENE-070112-1972 [details] [associations]
symbol:g3bp2 "GTPase activating protein (SH3
domain) binding protein 2" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070112-1972
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 EMBL:CU570873
EMBL:BC129213 IPI:IPI00487372 RefSeq:NP_001074032.1 UniGene:Dr.6807
Ensembl:ENSDART00000046376 GeneID:556409 KEGG:dre:556409
InParanoid:A1L1U3 OMA:NDIFRYV NextBio:20881470 Uniprot:A1L1U3
Length = 507
Score = 183 (69.5 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 54/158 (34%), Positives = 82/158 (51%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR----VDGDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + PD +H+FY SS + ++G +E+ +IH V+SL F
Sbjct: 11 VGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDLNGKLSEAVYGQAEIHKKVMSLQF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGELSNNGQ-PMRKFLQTFVLAPEGSVANKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPE 716
IF + DE V+ L SE + D D P PE
Sbjct: 130 IFRYEDE--VFGDSEAELDEESEEETDEPEDRQ-PSPE 164
Score = 100 (40.3 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 44/158 (27%), Positives = 67/158 (42%)
Query: 821 TQPSF-TKTASTTSDWNPAPQPTTQQSNYTSSFVPESGVSSHMPESG---FEAV-----D 871
TQP TK ++ P Q + TS GV S P++G F V D
Sbjct: 277 TQPRVETKPEMLSASIRPRDQRIRDRPPVTSRGPRSDGVPSSEPQAGKPHFSFVNKGRAD 336
Query: 872 DSLGLDEGEV------KSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGV 924
+S +D V ++V NLP + E+++ F FG + V +R N K G
Sbjct: 337 ESSEMDSRRVVRYPDSHQLFVGNLPHDIDESELKDFFMTFGNV----VELRINTKSTGGK 392
Query: 925 C--YAFVEFEDISGVQNAIQASPIQLAGR-QVYIEERR 959
+ FV F+D VQ + PI G ++ +EE++
Sbjct: 393 IPNFGFVVFDDSEPVQRILGVKPIMFRGEVRLNVEEKK 430
>WB|WBGene00017768 [details] [associations]
symbol:F25B4.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
SMART:SM00386 GO:GO:0009792 GO:GO:0005622 GO:GO:0006396
Gene3D:1.25.40.10 GO:GO:0007281 EMBL:FO080538
GeneTree:ENSGT00390000005033 KO:K13217 PIR:T25725
RefSeq:NP_504495.1 ProteinModelPortal:Q22961 SMR:Q22961
STRING:Q22961 PaxDb:Q22961 EnsemblMetazoa:F25B4.5.1
EnsemblMetazoa:F25B4.5.2 GeneID:178955 KEGG:cel:CELE_F25B4.5
UCSC:F25B4.5.1 CTD:178955 WormBase:F25B4.5 eggNOG:NOG298273
HOGENOM:HOG000018990 InParanoid:Q22961 OMA:VLLELRY NextBio:903274
Uniprot:Q22961
Length = 710
Score = 232 (86.7 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 100/366 (27%), Positives = 156/366 (42%)
Query: 165 IAVREEMY-KKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGDFNKV 223
+A R+ +Y K KE + + GFE I+RPYFHVKPL +L NW +YLDF ++G +V
Sbjct: 345 VARRKRIYDKNMKECEIRA-GFEANIKRPYFHVKPLDYPQLFNWMSYLDFEIKEGHEERV 403
Query: 224 VKLYERCLIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFK 283
L++RCLI C+ Y E+WI+Y + + + + L + F+
Sbjct: 404 KILFDRCLIPCSLYEEFWIKYARWTWKTYKSKTKSREIYMKAKIHCPTSLNLALSESGFE 463
Query: 284 EQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAI-AIEKGKE 342
E + D A E PG + +++ + RR E + E + E
Sbjct: 464 ESVENFDDAIKILDNFREEY-PGYVLLELRYLGVLRRKSEKEGHGAPSEFVMNQYESLIR 522
Query: 343 HSQTLPMLYAQYSRFL---HLVSRNAEK-ARQILVDSLDHVQLSKPLLEALIHFESIQSS 398
SQ+ P L++ YS L H SR K A+++L ++ + L + S
Sbjct: 523 DSQSSPNLHSFYSLKLARYHQKSRRDPKLAQKVLKKAISIDPFNLQLYSQYVDIAYSSES 582
Query: 399 PKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEFLGLFGDAQLIKKAEDRHARL 458
++D ++ D L SN ++R+ L FLE LG + ++ D H L
Sbjct: 583 MSELDVIQSF-DVALDSNLRLEDKVRFSQRK-LD--FLEELG--NNILAVEDHRDFHYNL 636
Query: 459 F--LPHRSTSELRKRHAED----FLASERAKMAKS-YSGA--PSPAQSLMGAYPSSQNPW 509
LP T +R R D LA + Y+ A PA ++M P Q P+
Sbjct: 637 LGQLPDNVT--IRTRFVNDPSRVALAPAMPPQQQMVYAPAIQQQPAMNMMPMMPM-QMPY 693
Query: 510 AAGYGV 515
A V
Sbjct: 694 MASSAV 699
Score = 52 (23.4 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 15/71 (21%), Positives = 31/71 (43%)
Query: 40 LFERGLAYVGTDYLSFPLWDKYIEYE---YMQQ--------EWSRVAMIYTRILENPIQQ 88
L+ R + G +Y S LW + I +E YM + R+ +++ ++L P
Sbjct: 191 LYARAIEIAGLEYQSDRLWLEAIGFERAVYMDELCKGNTNASCKRIGVLFDKLLSTPTFH 250
Query: 89 LDRYFSSFKEF 99
+F + ++
Sbjct: 251 APSHFDRYVQY 261
Score = 40 (19.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 55 FPLWDKYIEYE 65
+ W KY EYE
Sbjct: 133 YGFWQKYAEYE 143
>UNIPROTKB|E1C769 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:AADN02008996
IPI:IPI00597302 RefSeq:XP_420536.2 UniGene:Gga.10005
ProteinModelPortal:E1C769 Ensembl:ENSGALT00000017688 GeneID:422576
KEGG:gga:422576 NextBio:20825190 Uniprot:E1C769
Length = 482
Score = 184 (69.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 56/170 (32%), Positives = 85/170 (50%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + PD +H+FY SS + +D G E+ +IH V+SL F
Sbjct: 11 VGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDASGKPQEAVYGQAEIHKKVMSLQF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGELSNNGQ-PMRKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVL---SENKFDVQHDASSPIPEQAGLAASDYVLE 728
IF + DE V+ L SE + + + + P PE AS E
Sbjct: 130 IFRYEDE--VFGDSEGELDEESEEEVEEEQEERQPSPEPVQENASSTYYE 177
Score = 94 (38.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E++E F +FG + V +R N K V G + FV F+D VQ
Sbjct: 333 LFVGNLPHDIDESELKEFFMSFGNV----VELRINTKGVGGKLPNFGFVVFDDSEPVQRI 388
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 389 LVAKPIMFRGEVRLNVEEKK 408
Score = 42 (19.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 17/76 (22%), Positives = 32/76 (42%)
Query: 837 PAPQPTTQQ--SNYTSSFVPESGVSSHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVT 894
P+P+P + S Y + +G+ + ES E + L E E K ++
Sbjct: 162 PSPEPVQENASSTYYENHPVTNGIEEALEESSHEP-EPEL---ESETKPEELKTEVEEKA 217
Query: 895 AFEIEEEFQNFGRIKP 910
E+EE+ + ++P
Sbjct: 218 LEELEEKSPSPPPVEP 233
Score = 41 (19.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 857 GVSSHMPESGFEAVDDS 873
GV +P GF DDS
Sbjct: 366 GVGGKLPNFGFVVFDDS 382
>UNIPROTKB|Q32LC7 [details] [associations]
symbol:G3BP "Ras GTPase-activating protein-binding protein
1" species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0090305 GO:GO:0004386 GO:GO:0004519 InterPro:IPR018222
PROSITE:PS50177 EMBL:BC109645 IPI:IPI00693236 RefSeq:NP_001032700.1
UniGene:Bt.5197 ProteinModelPortal:Q32LC7 STRING:Q32LC7
PRIDE:Q32LC7 Ensembl:ENSBTAT00000027067 GeneID:534214
KEGG:bta:534214 CTD:10146 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 InParanoid:Q32LC7 OMA:VVSNDME OrthoDB:EOG4XWFZ0
NextBio:20876309 ArrayExpress:Q32LC7 Uniprot:Q32LC7
Length = 465
Score = 193 (73.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 60/189 (31%), Positives = 91/189 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
T +I+ +++ + N GV+V V G + RR F+QTF LAP+ ++V ND
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPEGSVANKFYVHND 129
Query: 682 IFHFLDEE--PVYQHPAPVLSENKFDVQHDASSP--IPEQAGLAASDYV---LEEEAREY 734
IF + DE P E + + +P +P+ +G V LEE E
Sbjct: 130 IFRYQDEVFGGFITEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEP 189
Query: 735 VSSVHIEDD 743
V+ E +
Sbjct: 190 VAEPEPEPE 198
Score = 83 (34.3 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+++ NLP V E+++ FQN+G + V +R + FV F+D VQ +
Sbjct: 341 LFIGNLPHEVDKSELKDFFQNYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVLSN 396
Query: 944 SPIQLAGR-QVYIEERR 959
PI G ++ +EE++
Sbjct: 397 RPIMFRGEVRLNVEEKK 413
>MGI|MGI:1351465 [details] [associations]
symbol:G3bp1 "GTPase activating protein (SH3 domain) binding
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IMP] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1351465 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0090305
GO:GO:0004386 GO:GO:0090090 GO:GO:0004519 GO:GO:0010494
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 eggNOG:NOG324333
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 ChiTaRS:G3BP1
EMBL:AB001927 EMBL:BC021156 IPI:IPI00130095 RefSeq:NP_038744.1
UniGene:Mm.380129 UniGene:Mm.39631 UniGene:Mm.405739
ProteinModelPortal:P97855 SMR:P97855 STRING:P97855
PhosphoSite:P97855 PaxDb:P97855 PRIDE:P97855
Ensembl:ENSMUST00000018727 GeneID:27041 KEGG:mmu:27041
InParanoid:P97855 NextBio:304965 Bgee:P97855 Genevestigator:P97855
GermOnline:ENSMUSG00000018583 Uniprot:P97855
Length = 465
Score = 190 (71.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 56/186 (30%), Positives = 90/186 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
T +I+ +++ + N GV+V V G + RR F+QTF LAP+ ++V ND
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPEGSVANKFYVHND 129
Query: 682 IFHFLDEE--PVYQHPAPVLSENKFDVQHDASSP--IPEQAGLAASDYVLEEEAREYVSS 737
IF + DE P E + + +P +P+ +G D + + E++
Sbjct: 130 IFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSG-TFYDQTVSNDLEEHLEE 188
Query: 738 VHIEDD 743
+E +
Sbjct: 189 PVVEPE 194
Score = 85 (35.0 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+++ NLP V E+++ FQNFG + V +R + FV F+D VQ +
Sbjct: 340 LFIGNLPHEVDKSELKDFFQNFGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVLSN 395
Query: 944 SPIQLAGR-QVYIEERR 959
PI G ++ +EE++
Sbjct: 396 RPIMFRGAVRLNVEEKK 412
>UNIPROTKB|F1RQB6 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:CU570659
Ensembl:ENSSSCT00000018595 Uniprot:F1RQB6
Length = 464
Score = 189 (71.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 58/182 (31%), Positives = 89/182 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V++ NF
Sbjct: 10 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMAQNF 69
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
T +I+ +++ + N GV+V V G + RR F+QTF LAP+ ++V ND
Sbjct: 70 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPEGSVANKFYVHND 128
Query: 682 IFHFLDEE--PVYQHPAPVLSENKFDVQHDASSP--IPEQAGLAASDYV---LEEEAREY 734
IF + DE P E + + +P +P+ +G V LEE E
Sbjct: 129 IFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTVSNDLEEHLEEP 188
Query: 735 VS 736
V+
Sbjct: 189 VA 190
Score = 85 (35.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+++ NLP V E+++ FQN+G + V +R + FV F+D VQ +
Sbjct: 340 LFIGNLPHEVDKLELKDFFQNYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVLSN 395
Query: 944 SPIQLAGR-QVYIEERR 959
PI G ++ +EE++
Sbjct: 396 RPIMFRGEVRLNVEEKK 412
>UNIPROTKB|Q13283 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007265 "Ras
protein signal transduction" evidence=TAS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:U32519 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0007265 GO:GO:0003677
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004003
GO:GO:0090305 GO:GO:0004519 InterPro:IPR018222 PROSITE:PS50177
GO:GO:0004004 CTD:10146 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 EMBL:BC006997
IPI:IPI00012442 RefSeq:NP_005745.1 RefSeq:NP_938405.1
UniGene:Hs.587054 PDB:3Q90 PDBsum:3Q90 ProteinModelPortal:Q13283
SMR:Q13283 IntAct:Q13283 MINT:MINT-5002789 STRING:Q13283
PhosphoSite:Q13283 DMDM:14916572 PaxDb:Q13283 PeptideAtlas:Q13283
PRIDE:Q13283 DNASU:10146 Ensembl:ENST00000356245
Ensembl:ENST00000394123 GeneID:10146 KEGG:hsa:10146 UCSC:uc003lum.3
GeneCards:GC05P151151 HGNC:HGNC:30292 HPA:HPA004052 MIM:608431
neXtProt:NX_Q13283 PharmGKB:PA162389105 InParanoid:Q13283
PhylomeDB:Q13283 ChiTaRS:G3BP1 GenomeRNAi:10146 NextBio:38391
ArrayExpress:Q13283 Bgee:Q13283 CleanEx:HS_G3BP1
Genevestigator:Q13283 GermOnline:ENSG00000145907 Uniprot:Q13283
Length = 466
Score = 195 (73.7 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 55/178 (30%), Positives = 88/178 (49%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
T +I+ +++ + N GV+V V G + RR F+QTF LAP+ ++V ND
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPEGSVANKFYVHND 129
Query: 682 IFHFLDEE--PVYQHPAPVLSENKFDVQHDASSP--IPEQAGLAASDYVLEEEAREYV 735
IF + DE P E + + +P +P+ +G V+ + E++
Sbjct: 130 IFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHL 187
Score = 78 (32.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+++ NLP V E+++ FQ++G + V +R + FV F+D VQ +
Sbjct: 342 LFIGNLPHEVDKSELKDFFQSYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVLSN 397
Query: 944 SPIQLAGR-QVYIEERR 959
PI G ++ +EE++
Sbjct: 398 RPIMFRGEVRLNVEEKK 414
>UNIPROTKB|E2RN45 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:AAEX03003083
Ensembl:ENSCAFT00000028303 Uniprot:E2RN45
Length = 441
Score = 192 (72.6 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
T +I+ +++ + N GV+V V G + RR F+QTF LAP+ ++V ND
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPEGSVANKFYVHND 129
Query: 682 IFHFLDEE--PVYQHPAPVLSENKFDVQHDASSP--IPEQAGLAASDYV---LEEEAREY 734
IF + DE P E + + +P +P+ +G V LEE E
Sbjct: 130 IFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQSVSNDLEEHLEEP 189
Query: 735 VS 736
V+
Sbjct: 190 VA 191
Score = 78 (32.5 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+++ NLP V E+++ FQ++G + V +R + FV F+D VQ +
Sbjct: 341 LFIGNLPHEVDKSELKDFFQSYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVLSN 396
Query: 944 SPIQLAGR-QVYIEERR 959
PI G ++ +EE++
Sbjct: 397 RPIMFRGEVRLNVEEKK 413
>ZFIN|ZDB-GENE-040426-2698 [details] [associations]
symbol:zgc:56304 "zgc:56304" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2698 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 EMBL:BC097071 IPI:IPI00772318
UniGene:Dr.31694 ProteinModelPortal:Q4V942 STRING:Q4V942
InParanoid:Q4V942 ArrayExpress:Q4V942 Uniprot:Q4V942
Length = 501
Score = 179 (68.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 55/169 (32%), Positives = 88/169 (52%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + PD +H+FY SS + +D G E+ +IH V+SL F
Sbjct: 11 VGREFVRQYYTLLNKAPDYLHRFYGRNSSYVHGGLDSNGKPEEAVYGQAEIHKKVMSLQF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKG---YFVLND 681
+ +I+ +++ + GV+V V G + RR F+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLGDGVVVQVMGELSNSGRPMRR-FMQTFVLAPEGSAVNKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVLSENKFD-VQHDA----SSPIPEQAGLAASDY 725
IF + EE V+ L E++ + V+ + +SP P Q +++ Y
Sbjct: 130 IFRY--EEEVFGDSEAELGESEEEEVEEEPVETHASPEPAQDRPSSTTY 176
Score = 89 (36.4 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP + E+++ F FG + V +R N K V G + FV F+D VQ
Sbjct: 365 LFVGNLPHDIDEGELKDFFMTFGNV----VEMRINTKGVGGKLPNFGFVVFDDSDPVQRI 420
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ A PI G ++ +EE++
Sbjct: 421 LGAKPIMFRGEVRLNVEEKK 440
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 838 APQPTTQQSNYTSSFVPESGVSSHMPESGFEAVDD 872
+P+P + + T+ + P VS+ + E EAV +
Sbjct: 163 SPEPAQDRPSSTTYYEPPPPVSNGVEEQQEEAVPE 197
Score = 42 (19.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 847 NYTSSFVPESGVSSHMPESGFEAVDDS 873
N + GV +P GF DDS
Sbjct: 388 NVVEMRINTKGVGGKLPNFGFVVFDDS 414
>ZFIN|ZDB-GENE-030131-7452 [details] [associations]
symbol:g3bp1 "GTPase activating protein (SH3
domain) binding protein 1" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-7452
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P09651
CTD:10146 HOVERGEN:HBG007211 EMBL:BC045874 IPI:IPI00501560
RefSeq:NP_956250.1 UniGene:Dr.7036 ProteinModelPortal:Q7ZVG3
STRING:Q7ZVG3 GeneID:335512 KEGG:dre:335512 NextBio:20810882
ArrayExpress:Q7ZVG3 Uniprot:Q7ZVG3
Length = 477
Score = 184 (69.8 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 54/182 (29%), Positives = 91/182 (50%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD +H+FY SS + +D G E+ +IH V++L+F
Sbjct: 11 VGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPAEAVYGQSEIHKKVMALSF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+I+ +++ + N GV+V V G + + RKF+QTF LAP+ ++V ND
Sbjct: 71 RDCHTKIRHVDAHATLNEGVVVQVLGGL-SNNMQPMRKFMQTFVLAPEGTVANKFYVHND 129
Query: 682 IFHFLDEEPVYQHPAPVLSENKFDVQHDASSPIPEQAGLAASDYVLEEEAREYVSSVHIE 741
IF + DE V ++ + ++ + E + + + V EE + Y + +E
Sbjct: 130 IFRYQDE---------VFGDSDSEPPEESEEDVEELERVHSPEVVQEESSGYYEQTPCVE 180
Query: 742 DD 743
+
Sbjct: 181 PE 182
Score = 82 (33.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 38/155 (24%), Positives = 68/155 (43%)
Query: 807 ILRVSKSQSTSFVATQPSFTKTASTTSDWNPAPQ-PTTQQSNYTSSFVPESGVSSHMPES 865
++RV +Q V T+ T D P Q P ++ T P GV ES
Sbjct: 275 VVRVPSAQPRVEVKTETQ-TTAQRPQRDQRPRDQRPGPSPAHRT----PRPGVVRE-GES 328
Query: 866 GFEAVDDSLGLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVC 925
G V ++ + ++V N+P V E++E F+ +G + + + + +
Sbjct: 329 GESEVRRTVRYPDSH--QLFVGNVPHDVDKNELKEFFEQYGTVLE--LRINSGGKLPN-- 382
Query: 926 YAFVEFEDISGVQNAIQASPIQLAGR-QVYIEERR 959
+ FV F+D VQ + PI+L G ++ +EE++
Sbjct: 383 FGFVVFDDSEPVQKILNNRPIKLRGDVRLNVEEKK 417
>SGD|S000004509 [details] [associations]
symbol:PRP39 "U1 snRNP protein involved in splicing"
species:4932 "Saccharomyces cerevisiae" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005685 "U1 snRNP"
evidence=IDA] [GO:0000243 "commitment complex" evidence=IGI]
[GO:0000395 "mRNA 5'-splice site recognition" evidence=IGI]
[GO:0030627 "pre-mRNA 5'-splice site binding" evidence=IGI]
[GO:0071004 "U2-type prespliceosome" evidence=IDA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR003107 SMART:SM00386 SGD:S000004509 EMBL:BK006946
eggNOG:COG0457 EMBL:Z47816 GO:GO:0000243 GO:GO:0071004
GO:GO:0005685 GO:GO:0000395 GeneTree:ENSGT00390000005033 KO:K13217
OrthoDB:EOG4DNJD8 EMBL:L29224 EMBL:AY692912 PIR:S47920
RefSeq:NP_013667.1 ProteinModelPortal:P39682 DIP:DIP-812N
IntAct:P39682 MINT:MINT-612602 STRING:P39682 PaxDb:P39682
PRIDE:P39682 EnsemblFungi:YML046W GeneID:854960 KEGG:sce:YML046W
CYGD:YML046w HOGENOM:HOG000115710 OMA:NGHPGIA NextBio:978042
Genevestigator:P39682 GermOnline:YML046W Uniprot:P39682
Length = 629
Score = 150 (57.9 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 26 LCPNNFFFLLICFRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILENP 85
LC NN FE +G +LS P WDK+IE+E Q+ W V IY I+E P
Sbjct: 132 LCVNNPNETDFIRNNFEIAKDLIGKQFLSHPFWDKFIEFEVGQKNWHNVQRIYEYIIEVP 191
Query: 86 IQQLDRYFSSFKEFAASRPLSELR 109
+ Q R+F+S+K+F + L R
Sbjct: 192 LHQYARFFTSYKKFLNEKNLKTTR 215
Score = 120 (47.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 173 KKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFI---ERDGDFNKVVKLYER 229
+K + ++I FE+ I++P+F++ + +LENW YL F+ + D V+ +++R
Sbjct: 222 RKTQTTVNEIWQFESKIKQPFFNLGQVLNDDLENWSRYLKFVTDPSKSLDKEFVMSVFDR 281
Query: 230 CLIACANYPEYWIRYV 245
CLI C + W+ Y+
Sbjct: 282 CLIPCLYHENTWMMYI 297
>UNIPROTKB|Q5ZMN1 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
CTD:10146 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AADN02028650 EMBL:AADN02028651 EMBL:AADN02028652 EMBL:AJ719353
IPI:IPI00593144 RefSeq:NP_001006150.1 UniGene:Gga.4912
STRING:Q5ZMN1 Ensembl:ENSGALT00000006615 GeneID:416265
KEGG:gga:416265 InParanoid:Q5ZMN1 OMA:RNDGGEN NextBio:20819751
Uniprot:Q5ZMN1
Length = 472
Score = 190 (71.9 bits), Expect = 6.7e-14, Sum P(3) = 6.7e-14
Identities = 48/127 (37%), Positives = 71/127 (55%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD +H+FY SS + +D G ++ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPADAVYGQSDIHKKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+I+ +++ + N GV+V V G + + R+F+QTF LAP+ ++V ND
Sbjct: 71 KDCHTKIRHVDAHATLNDGVVVQVMGEL-SNNMQPVRRFMQTFVLAPEGSVANKFYVHND 129
Query: 682 IFHFLDE 688
IF + DE
Sbjct: 130 IFRYQDE 136
Score = 75 (31.5 bits), Expect = 6.7e-14, Sum P(3) = 6.7e-14
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGR-IKPDGVFVRNRKDVVGVC--YAFVEFEDISGVQNA 940
++V NLP V E+++ FQ G + G V R + G + FV F+D VQ
Sbjct: 341 LFVGNLPHDVDKSELKDFFQKLGSSLAGYGNVVELRINSGGKLPNFGFVVFDDPDPVQKI 400
Query: 941 IQASPIQLAGR-QVYIEERR 959
+ PI G ++ +EE++
Sbjct: 401 LSNRPIMFRGEVRLNVEEKK 420
Score = 37 (18.1 bits), Expect = 6.7e-14, Sum P(3) = 6.7e-14
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 831 TTSDWNPAPQPTTQQ 845
TT++ P P+P +Q
Sbjct: 189 TTAEAEPEPEPEPEQ 203
>UNIPROTKB|F1LVS8 [details] [associations]
symbol:F1LVS8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 IPI:IPI00561182
Ensembl:ENSRNOT00000002166 Uniprot:F1LVS8
Length = 439
Score = 185 (70.2 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 55/164 (33%), Positives = 85/164 (51%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+F+ SS + VD G E+ DIH ++SLNF
Sbjct: 15 VGREFVRQYYTLLNRAPEYLHRFFGRNSSYVHGGVDASGKPQEAVYGQNDIHYKMLSLNF 74
Query: 627 TAIEIKT--INSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ K +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 75 SECHTKICHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 133
Query: 682 IFHFLDEEPVYQHPAPVLSENKFDVQHDASSP-IPEQAGLAASD 724
+F + DE V+ P L E + + ++ SP + E A A D
Sbjct: 134 MFRYEDE--VFGDSEPELDEVEEEQENRQPSPEVQENANSAYYD 175
Score = 64 (27.6 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVC--YAFVEFEDISGVQNAI 941
++V NLP + E++E F +FG + + N K V G + FV F+D +Q +
Sbjct: 292 LFVGNLPHDIDENELKEFFMHFGNVVELHI---NTKGVGGKLPNFGFVVFDDSEPLQRIL 348
Query: 942 QASPIQLAGRQVYIEERR 959
+ + + +E+++
Sbjct: 349 IENQLCFGEVHLNVEKKK 366
Score = 43 (20.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 847 NYTSSFVPESGVSSHMPESGFEAVDDS 873
N + GV +P GF DDS
Sbjct: 315 NVVELHINTKGVGGKLPNFGFVVFDDS 341
>FB|FBgn0015778 [details] [associations]
symbol:rin "rasputin" species:7227 "Drosophila melanogaster"
[GO:0017124 "SH3 domain binding" evidence=ISS] [GO:0001752
"compound eye photoreceptor fate commitment" evidence=IMP]
[GO:0007265 "Ras protein signal transduction" evidence=IGI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016318 "ommatidial
rotation" evidence=IMP] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0007265 GO:GO:0000166
GO:GO:0005811 GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0001752
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0016318 eggNOG:NOG324333
HSSP:P33331 EMBL:AF231031 ProteinModelPortal:Q9NH72 SMR:Q9NH72
IntAct:Q9NH72 STRING:Q9NH72 PaxDb:Q9NH72 PRIDE:Q9NH72
FlyBase:FBgn0015778 InParanoid:Q9NH72 OrthoDB:EOG42RBPK
ArrayExpress:Q9NH72 Bgee:Q9NH72 Uniprot:Q9NH72
Length = 690
Score = 183 (69.5 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 55/168 (32%), Positives = 86/168 (51%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAI- 629
VG FV QYY +L + P+ +H+FY+ SS I G+S + +IH+ + LNF
Sbjct: 16 VGREFVRQYYTLLNKAPNHLHRFYNHNSSYIH--GES-KLVVGQREIHNRIQQLNFNDCH 72
Query: 630 -EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQE-KGYFVLNDIFHFLD 687
+I +++ + GV+V V+G + + + R+F QTF LA Q K Y+V NDIF + D
Sbjct: 73 AKISQVDAQATLGNGVVVQVTGEL-SNDGQPMRRFTQTFVLAAQSPKKYYVHNDIFRYQD 131
Query: 688 EEPVYQHPAPVLSENKFDVQHDAS--SPIPEQAGLAASDYVLEEEARE 733
+ SEN D +HD +QA A D V ++ ++
Sbjct: 132 LYIEDEQDGESRSEN--DEEHDVQVVGGTVDQAVQVAGDVVAQQPQQQ 177
Score = 73 (30.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 31/150 (20%), Positives = 66/150 (44%)
Query: 821 TQPSFTKTASTTSDWNPAPQPTTQQSNYTSSFVPESGVSSHMPESGFEAVDDSLGLDEGE 880
+Q S++ TAS+ ++ N ++ N +P+ S + FE S G+
Sbjct: 438 SQVSYSTTASSYNNSNG----NSRLDN--GGPLPQRNNSIRNNKGDFEQRRSSNTQQFGD 491
Query: 881 VKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVC----YAFVEFEDIS 935
+ +++ N+P + ++ E F FG + + + K G+ Y F+ ++D
Sbjct: 492 NQQLFLGNIPHHASEDDLREIFSRFGNVLELRILSKAGNKVPPGMRSPLNYGFITYDDPE 551
Query: 936 GVQNAIQASPIQLA-----GRQVYIEERRP 960
VQ + P+ G+++ +EE++P
Sbjct: 552 AVQKCLANCPLYFPENSPDGQKLNVEEKKP 581
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 802 KTYASILRVSKSQSTSFV-ATQPSFTKTASTTSDWNPAPQPTTQQSNYTSSFVPESGVSS 860
KTYA++ + + S + FV A + T S+ TS S VS
Sbjct: 383 KTYANLFKSTSSSPSGFVNAALQQQQQLQQQQQQQQSISSNTYNSSSATSGGGNGSQVSY 442
Query: 861 HMPESGFEAVDDSLGLDEG 879
S + + + LD G
Sbjct: 443 STTASSYNNSNGNSRLDNG 461
>UNIPROTKB|D6RAC7 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI00966108 ProteinModelPortal:D6RAC7 SMR:D6RAC7
Ensembl:ENST00000507745 HOGENOM:HOG000138029 ArrayExpress:D6RAC7
Bgee:D6RAC7 Uniprot:D6RAC7
Length = 141
Score = 179 (68.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/127 (37%), Positives = 71/127 (55%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+ ++V ND
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPEGSVPNKFYVHND 129
Query: 682 IFHFLDE 688
+F + DE
Sbjct: 130 MFRYEDE 136
>UNIPROTKB|E5RJU8 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292 ChiTaRS:G3BP1
EMBL:AC091982 IPI:IPI00973731 ProteinModelPortal:E5RJU8 SMR:E5RJU8
Ensembl:ENST00000522761 UCSC:uc010jhy.1 ArrayExpress:E5RJU8
Bgee:E5RJU8 Uniprot:E5RJU8
Length = 153
Score = 167 (63.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 43/120 (35%), Positives = 65/120 (54%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ-EKGYFVLNDIF 683
T +I+ +++ + N GV+V V G + RR F+QTF LAP+ F+ +F
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPEVHLALFLAQSLF 129
>UNIPROTKB|E5RH42 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00979451
ProteinModelPortal:E5RH42 SMR:E5RH42 Ensembl:ENST00000520578
ArrayExpress:E5RH42 Bgee:E5RH42 Uniprot:E5RH42
Length = 117
Score = 165 (63.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 41/108 (37%), Positives = 61/108 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ 672
T +I+ +++ + N GV+V V G + RR F+QTF LAP+
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPE 117
>UNIPROTKB|Q5HYE9 [details] [associations]
symbol:DKFZp313K0921 "Putative uncharacterized protein
DKFZp313K0921" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 RefSeq:NP_005745.1
RefSeq:NP_938405.1 UniGene:Hs.587054 DNASU:10146 GeneID:10146
KEGG:hsa:10146 HGNC:HGNC:30292 PharmGKB:PA162389105
GenomeRNAi:10146 NextBio:38391 HOGENOM:HOG000138029 EMBL:AC091982
EMBL:AK300098 EMBL:BX647869 IPI:IPI00982147 SMR:Q5HYE9
STRING:Q5HYE9 Ensembl:ENST00000520177 Ensembl:ENST00000522367
HOVERGEN:HBG055943 Uniprot:Q5HYE9
Length = 122
Score = 165 (63.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 41/108 (37%), Positives = 61/108 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ 672
T +I+ +++ + N GV+V V G + RR F+QTF LAP+
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPE 117
>UNIPROTKB|D6RGJ4 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00965049 ProteinModelPortal:D6RGJ4
SMR:D6RGJ4 Ensembl:ENST00000509100 ArrayExpress:D6RGJ4 Bgee:D6RGJ4
Uniprot:D6RGJ4
Length = 125
Score = 158 (60.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 41/108 (37%), Positives = 61/108 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ 672
+ +I+ +++ + + GV+V V G + RKF+QTF LAP+
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAPE 117
>UNIPROTKB|D6RBW8 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00966981 ProteinModelPortal:D6RBW8
SMR:D6RBW8 Ensembl:ENST00000511146 ArrayExpress:D6RBW8 Bgee:D6RBW8
Uniprot:D6RBW8
Length = 116
Score = 156 (60.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 41/107 (38%), Positives = 60/107 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAP 671
+ +I+ +++ + + GV+V V G + RKF+QTF LAP
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQTFVLAP 116
>UNIPROTKB|E5RIZ6 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292 ChiTaRS:G3BP1
EMBL:AC091982 IPI:IPI00974560 ProteinModelPortal:E5RIZ6 SMR:E5RIZ6
Ensembl:ENST00000507878 ArrayExpress:E5RIZ6 Bgee:E5RIZ6
Uniprot:E5RIZ6
Length = 148
Score = 138 (53.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 41/118 (34%), Positives = 61/118 (51%)
Query: 571 VGSYFVGQYYQVLQQQPDLVH----------QFYSDASSMIR--VD--GDSTESASSMLD 616
VG FV QYY +L Q PD++H +FY SS + +D G ++ +
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHSLHIGYHMIIRFYGKNSSYVHGGLDSNGKPADAVYGQKE 70
Query: 617 IHSLVISLNFTAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ 672
IH V+S NFT +I+ +++ + N GV+V V G + RR F+QTF LAP+
Sbjct: 71 IHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRR-FMQTFVLAPE 127
Score = 126 (49.4 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 589 LVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNFTAI--EIKTINSLGSWNG 642
++ +FY SS + +D G ++ +IH V+S NFT +I+ +++ + N
Sbjct: 39 MIIRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLND 98
Query: 643 GVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLNDIFHFLDE 688
GV+V V G + RR F+QTF LAP+ ++V NDIF + DE
Sbjct: 99 GVVVQVMGLLSNNNQALRR-FMQTFVLAPEGSVANKFYVHNDIFRYQDE 146
>UNIPROTKB|D6RE13 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00966712 ProteinModelPortal:D6RE13
SMR:D6RE13 Ensembl:ENST00000515457 ArrayExpress:D6RE13 Bgee:D6RE13
Uniprot:D6RE13
Length = 111
Score = 136 (52.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQT 666
+ +I+ +++ + + GV+V V G + RKF+QT
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQ-PERKFMQT 111
>UNIPROTKB|F1M2M6 [details] [associations]
symbol:F1M2M6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR002075
Pfam:PF02136 GO:GO:0005737 GO:GO:0006810 InterPro:IPR018222
PROSITE:PS50177 GeneTree:ENSGT00390000011365 IPI:IPI00563721
Ensembl:ENSRNOT00000048672 OMA:QSHTISS Uniprot:F1M2M6
Length = 403
Score = 150 (57.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + PD++H+FY SS +D G ++ +IH V+ NF
Sbjct: 13 VGREFVRQYYTLLNRVPDMLHRFYVKKSSYAHGGLDSNGKPADAVYGQKEIHRKVMLQNF 72
Query: 627 TAIEIKT--INSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQ---EKGYFVLND 681
T K +++ + N V+V V G + R F+QTF LAP+ ++V D
Sbjct: 73 TNCHTKIHHVDAYATQNDRVVVQVMGLLSNNNQALWR-FMQTFVLAPEGSTANKFYVHKD 131
Query: 682 IFHFLDEEPVYQHPAPVLSENKFDVQHDASSPIPEQAG--LAASDY-VLEEEAREYVSSV 738
IF DE V+ ++E + + + + P Q + + DY + + E++
Sbjct: 132 IFRHQDE--VF---GGFVTEPQEESEEEVEEPEERQQSPEVVSDDYQTVSNDLEEHLEEP 186
Query: 739 HIE 741
+E
Sbjct: 187 VVE 189
Score = 50 (22.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 884 VYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDISGVQNAIQA 943
+++ NLP V + E + F +IK G++ VVG V F+D VQ +
Sbjct: 323 LFIGNLPHEVD----KSELRIFSKIK--GMWWSCALTVVGSYPISVLFDDSEPVQKVLHN 376
Query: 944 SPIQLAGRQVY-IEERR 959
PI + +EE++
Sbjct: 377 RPITFGCAVLLNVEEKK 393
>UNIPROTKB|E5RI46 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00982785
ProteinModelPortal:E5RI46 SMR:E5RI46 Ensembl:ENST00000520006
ArrayExpress:E5RI46 Bgee:E5RI46 Uniprot:E5RI46
Length = 105
Score = 131 (51.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSG 650
T +I+ +++ + N GV+V V G
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMG 96
>UNIPROTKB|E5RIF8 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00982712
ProteinModelPortal:E5RIF8 SMR:E5RIF8 Ensembl:ENST00000523519
ArrayExpress:E5RIF8 Bgee:E5RIF8 Uniprot:E5RIF8
Length = 106
Score = 131 (51.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L Q PD++H+FY SS + +D G ++ +IH V+S NF
Sbjct: 11 VGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSG 650
T +I+ +++ + N GV+V V G
Sbjct: 71 TNCHTKIRHVDAHATLNDGVVVQVMG 96
>TAIR|locus:2152965 [details] [associations]
symbol:AT5G41770 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;ISS]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 PROSITE:PS50293 SMART:SM00386 EMBL:CP002688
GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10 KO:K12869 OMA:KFTFAKI
IPI:IPI00530971 RefSeq:NP_198992.2 UniGene:At.9341
ProteinModelPortal:F4JZX8 SMR:F4JZX8 PRIDE:F4JZX8
EnsemblPlants:AT5G41770.1 GeneID:834182 KEGG:ath:AT5G41770
Uniprot:F4JZX8
Length = 705
Score = 149 (57.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 98/400 (24%), Positives = 172/400 (43%)
Query: 58 WDKYIEYEYMQQEWSRVAMIYTR-ILENP-IQQLDRYFSSFK----EFAASRPLSELRTX 111
W +I++E E R IY R +L +P + RY + F+ E A R + E R
Sbjct: 196 WLSFIKFELRYNEIERARTIYERFVLCHPKVSAYIRY-AKFEMKGGEVARCRSVYE-RAT 253
Query: 112 XXXXXXXXXXXXXPSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEEL-EKYIAVREE 170
+ E + E E + + G AE+L K++A E+
Sbjct: 254 EKLADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKG--RAEDLYRKFVAF-EK 310
Query: 171 MYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTELENWHNYLDFIERDGDFNKVVKLYERC 230
Y + + I+G R Y S + ++W +Y+ E G+ +++ ++YER
Sbjct: 311 QYGDKEGIEDAIVGKR---RFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYERA 367
Query: 231 L--IACANYPEYWIRYV-LCMEASGSMDLAHNALARATHVF---VKRLP-------EIHL 277
+ + A YW RY+ L + + ++ + R V+ +K +P +I L
Sbjct: 368 IANVPPAEEKRYWQRYIYLWINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKIWL 427
Query: 278 FAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIK-HANMERRLGNLEDAFSLYEQAIA 336
AA+F+ + ++ GAR Q++ + I K + +E +LGN++ LYE+ +
Sbjct: 428 LAAQFEIRQLNLTGAR---QILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKLYERYL- 483
Query: 337 IEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSKP--LLEALIHFES 394
E E+ YA+ R LV E+AR I ++ L P L +A I FE
Sbjct: 484 -EWSPENCYAWSK-YAELER--SLVE--TERARAIFELAISQPALDMPELLWKAYIDFEI 537
Query: 395 IQSSPKQIDFL-EQLVDK---FLMSNSDSPSTANAAEREE 430
+ ++ L E+L+D+ + + S + A+AAE EE
Sbjct: 538 SEGELERTRALYERLLDRTKHYKVWVSFAKFEASAAELEE 577
Score = 55 (24.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 57 LWDKYIEYEYMQQEWSRVAMIYTRILE 83
+W KY ++E Q++++R ++ R +E
Sbjct: 94 VWVKYAQWEESQKDYARARSVWERAIE 120
Score = 45 (20.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 51 DYLSFPLWDKYIEYE 65
DY + LW KY E+E
Sbjct: 122 DYRNHTLWLKYAEFE 136
>UNIPROTKB|D6RBR0 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00965308 ProteinModelPortal:D6RBR0
SMR:D6RBR0 Ensembl:ENST00000507252 ArrayExpress:D6RBR0 Bgee:D6RBR0
Uniprot:D6RBR0
Length = 102
Score = 126 (49.4 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSG 650
+ +I+ +++ + + GV+V V G
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMG 96
>UNIPROTKB|D6REX8 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI00964602 ProteinModelPortal:D6REX8 SMR:D6REX8
Ensembl:ENST00000511868 ArrayExpress:D6REX8 Bgee:D6REX8
Uniprot:D6REX8
Length = 99
Score = 126 (49.4 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAI--EIKTINSLGSWNGGVLVMVSG 650
+ +I+ +++ + + GV+V V G
Sbjct: 71 SECHTKIRHVDAHATLSDGVVVQVMG 96
>FB|FBgn0032680 [details] [associations]
symbol:Ntf-2r "Nuclear transport factor-2-related"
species:7227 "Drosophila melanogaster" [GO:0006606 "protein import
into nucleus" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
HSSP:P33331 OrthoDB:EOG43BK59 EMBL:AY150767 EMBL:AY150768
FlyBase:FBgn0032680 InParanoid:Q8I078 Uniprot:Q8I078
Length = 130
Score = 125 (49.1 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 571 VGSYFVGQYYQVLQQQPDL--VHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTA 628
+G FV QYY + + V FY+ S + +G+ + A +L+ V SL+F
Sbjct: 10 IGKEFVQQYYAIFDDPANRKNVINFYNATDSFMTFEGNQIQGAPKILE---KVQSLSFQK 66
Query: 629 IE--IKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIF 683
I I T++S + +GGVL++V G +K + F Q F L P FV +DIF
Sbjct: 67 IARVITTVDSQPTSDGGVLIIVLGRLKCDDD-PPHAFSQIFLLKPNGGSLFVAHDIF 122
>DICTYBASE|DDB_G0277957 [details] [associations]
symbol:DDB_G0277957 "nuclear transport factor 2
(NTF2) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0277957 GO:GO:0000166 GO:GO:0006810
EMBL:AAFI02000023 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333
RefSeq:XP_642031.1 ProteinModelPortal:Q54Z21
EnsemblProtists:DDB0304427 GeneID:8621242 KEGG:ddi:DDB_G0277957
InParanoid:Q54Z21 OMA:STSANVV Uniprot:Q54Z21
Length = 516
Score = 111 (44.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 42/165 (25%), Positives = 81/165 (49%)
Query: 801 RKTYASILRVSKSQSTSFVATQPSFTKTASTTSDWNPAPQPTTQQSNYTS-SFVPESGVS 859
++T+A ++ ++ + T+ + +P T+++S++S P+ P++ S+ + S + +
Sbjct: 272 KQTWAQLVLINSTAQTASASEEP--TQSSSSSSS-QPSSSPSSSSSSVNNNSNTTTTTNN 328
Query: 860 SHMPESGFEAVDDSLGLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRK 919
+ + + DD +G +V++ S V I+E F FG V N +
Sbjct: 329 TTTTTTANKQKDDHHFSKDGN--TVFISFKSSKVDQAPIKEAFNQFG-------VVSNVR 379
Query: 920 DVVGVCYAFVEFEDISGVQNAIQ-----ASPIQLAGRQVYIEERR 959
+ G Y FVEFE VQNA+ ++ I +AG + +EERR
Sbjct: 380 ILTG--YGFVEFEKPESVQNALNYASTHSNKINVAGNIIKVEERR 422
Score = 86 (35.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR-VDGDSTESASSMLDIHSLVISLNFTAI 629
V + F+ +Y+ +L + P+ + FY S + R + +S +I+ +++ +
Sbjct: 7 VAASFLLKYFTLLIKTPENLKDFYHQNSKITRRFENGKANILTSYDNINEFLVNNSAKFG 66
Query: 630 EIKTINSLGSWNGGVLVMVS--GSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFLD 687
I+S+ G + ++ GS+ RR F+Q+F+L + +F+ NDIF F
Sbjct: 67 GNANISSIDCQPLGESIFMTCIGSIGFDGNVRR--FLQSFYLEKIQGSFFISNDIFAFTS 124
Query: 688 EE 689
+E
Sbjct: 125 DE 126
>FB|FBgn0031145 [details] [associations]
symbol:Ntf-2 "Nuclear transport factor-2" species:7227
"Drosophila melanogaster" [GO:0006606 "protein import into nucleus"
evidence=ISS;NAS] [GO:0008320 "protein transmembrane transporter
activity" evidence=ISS] [GO:0002807 "positive regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR002075
Pfam:PF02136 GO:GO:0006810 EMBL:AE014298 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 GeneTree:ENSGT00510000047030
HSSP:P33331 UniGene:Dm.7205 GeneID:33078 KEGG:dme:Dmel_CG1740
CTD:33078 FlyBase:FBgn0031145 GenomeRNAi:33078 NextBio:781834
GO:GO:0002807 EMBL:AY094761 EMBL:AY531117 EMBL:AY673973
RefSeq:NP_608422.1 SMR:Q9VRD6 IntAct:Q9VRD6 MINT:MINT-949859
STRING:Q9VRD6 EnsemblMetazoa:FBtr0077241 EnsemblMetazoa:FBtr0333762
UCSC:CG1740-RA InParanoid:Q9VRD6 OMA:DAIMARF Uniprot:Q9VRD6
Length = 130
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 571 VGSYFVGQYYQVLQQQPDLVH--QFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTA 628
+G FV QYY + + + FYS S + +G + A +L+ V SL+F
Sbjct: 10 IGKGFVQQYYAIFDDPANRANVVNFYSATDSFMTFEGHQIQGAPKILE---KVQSLSFQK 66
Query: 629 IE--IKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIF 683
I I T++S +++GGVL+ V G ++ + F Q FFL +FV +DIF
Sbjct: 67 ITRVITTVDSQPTFDGGVLINVLGRLQCDDD-PPHAFSQVFFLKANAGTFFVAHDIF 122
>ASPGD|ASPL0000071333 [details] [associations]
symbol:ntfA species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008536 "Ran GTPase binding" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0005737 GO:GO:0015031
EMBL:BN001303 EMBL:AACD01000084 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 HOGENOM:HOG000197024 OMA:MTFEGVQ EMBL:AY038983
RefSeq:XP_662546.1 ProteinModelPortal:Q96VN3 SMR:Q96VN3
STRING:Q96VN3 EnsemblFungi:CADANIAT00005455 GeneID:2872742
KEGG:ani:AN4942.2 OrthoDB:EOG4HHSBX Uniprot:Q96VN3
Length = 125
Score = 119 (46.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAIE 630
+ FV YYQ + Y D SM+ + + + + +++ + SL F ++
Sbjct: 7 IAQQFVTFYYQTFDGNRAGLAPLYRD-HSMLTFETSAIQGVAGIIE---KLTSLPFQKVQ 62
Query: 631 --IKTINSLGSW-NGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKG-YFVLNDIFHFL 686
+ T+++ S +GG+LV+V+G++ E + QTF L P G YFVLND+F +
Sbjct: 63 HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122
>TAIR|locus:2007973 [details] [associations]
symbol:CSTF77 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006397 "mRNA processing" evidence=ISS]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0031123 "RNA 3'-end processing"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR003107
InterPro:IPR008847 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF05843 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00386 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0045892 GO:GO:0003729 GO:GO:0006397 Gene3D:1.25.40.10
eggNOG:COG5107 KO:K14408 GO:GO:0031123 UniGene:At.27878
UniGene:At.28561 EMBL:BT002320 IPI:IPI00548656 RefSeq:NP_173218.2
SMR:Q8GUP1 IntAct:Q8GUP1 STRING:Q8GUP1 EnsemblPlants:AT1G17760.1
GeneID:838354 KEGG:ath:AT1G17760 TAIR:At1g17760
HOGENOM:HOG000030800 InParanoid:Q8GUP1 OMA:FEQTYGD
ProtClustDB:CLSN2690404 Genevestigator:Q8GUP1 Uniprot:Q8GUP1
Length = 734
Score = 125 (49.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 75/323 (23%), Positives = 138/323 (42%)
Query: 145 EQT-SKPVSAGLTEAEELEKYIAVREEMYKKAKEFDSKIIGFETAIRRPYFHVKPLSVTE 203
E T ++ ++ GL E K+ + R +Y++ K++ +I A+ P K T+
Sbjct: 170 ENTVNRQLAKGLVN-EYQPKFNSARA-VYRERKKYIEEIDWNMLAVP-PTGTSK--EETQ 224
Query: 204 LENWHNYLDF-------IERDGDFNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMDL 256
W +L F I+ +++ YE+CL+ +YP+ W Y SGS D
Sbjct: 225 WVAWKKFLSFEKGNPQRIDTASSTKRIIYAYEQCLMCLYHYPDVWYDYAEWHVKSGSTDA 284
Query: 257 AHNALARATHVFVKRLPEIHL--FA-ARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIK 313
A RA +K +P+ + +A A +E G I A+ Y+ + ++ L A I+
Sbjct: 285 AIKVFQRA----LKAIPDSEMLKYAFAEMEESRGAIQSAKKLYENILGASTNSL--AHIQ 338
Query: 314 HANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILV 373
+ RR +E A + ++ K S T + Y ++ + + + A I
Sbjct: 339 YLRFLRRAEGVEAARKYF-----LDARKSPSCTYHV-YIAFATMAFCIDKEPKVAHNIFE 392
Query: 374 DSLDHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVD-KFLMSNSDSP-STANAAEREEL 431
+ L + +S+P+ ++ K DFL +L D + + + + ST + E+
Sbjct: 393 EGLK-LYMSEPVY--IL---------KYADFLTRLNDDRNIRALFERALSTLPVEDSAEV 440
Query: 432 SCVFLEFLGLFGDAQLIKKAEDR 454
F++F +GD I K E R
Sbjct: 441 WKRFIQFEQTYGDLASILKVEQR 463
Score = 68 (29.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 39 RLFERGLAYVGTDYLSFPLWDKYIEYEY------MQQEWSR-VAM--IYTRILENPIQQL 89
+ FE L Y+GTD S P+W +YI + + ++ R A+ +Y R + P +
Sbjct: 100 KAFEFMLNYIGTDIASGPIWTEYIAFLKSLPALNLNEDLHRKTALRKVYHRAILTPTHHV 159
Query: 90 DRYFSSFKEF 99
++ + ++ F
Sbjct: 160 EQLWKDYENF 169
>GENEDB_PFALCIPARUM|PF14_0122 [details] [associations]
symbol:PF14_0122 "nuclear transport factor 2,
putative" species:5833 "Plasmodium falciparum" [GO:0006606 "protein
import into nucleus" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002075 Pfam:PF02136 GO:GO:0005622
GO:GO:0006606 EMBL:AE014187 InterPro:IPR018222 PROSITE:PS50177
HOGENOM:HOG000197024 RefSeq:XP_001348295.2
ProteinModelPortal:Q8ILX1 PRIDE:Q8ILX1
EnsemblProtists:PF14_0122:mRNA GeneID:811703 KEGG:pfa:PF14_0122
EuPathDB:PlasmoDB:PF3D7_1412300 ProtClustDB:CLSZ2431947
Uniprot:Q8ILX1
Length = 125
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 570 QVGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLD-IHSLVISLNFTA 628
++G FV Y+Q+ + + Y D S M+ + D S +++ ++ L ++
Sbjct: 10 EIGKEFVNHYFQLFNSGRNELAALYKDIS-MMSFENDQCRGTSQIIERLNKLPPTVVHKC 68
Query: 629 IEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKG-YFVLNDIFHF 685
+ +++ + N G+L++V G + +E + KF ++F L P G YF+ ND+F F
Sbjct: 69 L---SLDIQPTPNNGILILVCGDIIIEEN-KPLKFCRSFHLFPLPSGGYFIFNDLFRF 122
>UNIPROTKB|Q8ILX1 [details] [associations]
symbol:PF14_0122 "Nuclear transport factor 2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=ISS] InterPro:IPR002075 Pfam:PF02136
GO:GO:0005622 GO:GO:0006606 EMBL:AE014187 InterPro:IPR018222
PROSITE:PS50177 HOGENOM:HOG000197024 RefSeq:XP_001348295.2
ProteinModelPortal:Q8ILX1 PRIDE:Q8ILX1
EnsemblProtists:PF14_0122:mRNA GeneID:811703 KEGG:pfa:PF14_0122
EuPathDB:PlasmoDB:PF3D7_1412300 ProtClustDB:CLSZ2431947
Uniprot:Q8ILX1
Length = 125
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 570 QVGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLD-IHSLVISLNFTA 628
++G FV Y+Q+ + + Y D S M+ + D S +++ ++ L ++
Sbjct: 10 EIGKEFVNHYFQLFNSGRNELAALYKDIS-MMSFENDQCRGTSQIIERLNKLPPTVVHKC 68
Query: 629 IEIKTINSLGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKG-YFVLNDIFHF 685
+ +++ + N G+L++V G + +E + KF ++F L P G YF+ ND+F F
Sbjct: 69 L---SLDIQPTPNNGILILVCGDIIIEEN-KPLKFCRSFHLFPLPSGGYFIFNDLFRF 122
>SGD|S000000811 [details] [associations]
symbol:NTF2 "Nuclear envelope protein" species:4932
"Saccharomyces cerevisiae" [GO:0006913 "nucleocytoplasmic
transport" evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=IMP] [GO:0008536 "Ran GTPase binding" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 SGD:S000000811 GO:GO:0016021
GO:GO:0005737 GO:GO:0005635 EMBL:BK006939 GO:GO:0006606 EMBL:U18778
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
GeneTree:ENSGT00510000047030 HOGENOM:HOG000197024 OMA:MTFEGVQ
OrthoDB:EOG4HHSBX EMBL:AY558448 EMBL:L22204 PIR:S50467
RefSeq:NP_010925.1 PDB:1GY7 PDB:1GYB PDBsum:1GY7 PDBsum:1GYB
ProteinModelPortal:P33331 SMR:P33331 DIP:DIP-2245N IntAct:P33331
MINT:MINT-525215 STRING:P33331 PaxDb:P33331 PeptideAtlas:P33331
EnsemblFungi:YER009W GeneID:856727 KEGG:sce:YER009W CYGD:YER009w
EvolutionaryTrace:P33331 NextBio:982832 Genevestigator:P33331
GermOnline:YER009W Uniprot:P33331
Length = 125
Score = 113 (44.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 575 FVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAIE--IK 632
F YY + Y + SM+ + + A DI ++SL F ++ I
Sbjct: 12 FTQFYYNQFDTDRSQLGNLYRN-ESMLTFETSQLQGAK---DIVEKLVSLPFQKVQHRIT 67
Query: 633 TINSL-GSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIF 683
T+++ S NG VLVM++G + E ++F Q F L P Y+V NDIF
Sbjct: 68 TLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDGNSYYVFNDIF 119
>UNIPROTKB|D6RBM9 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI01019015 ProteinModelPortal:D6RBM9 SMR:D6RBM9
Ensembl:ENST00000509561 ArrayExpress:D6RBM9 Bgee:D6RBM9
Uniprot:D6RBM9
Length = 78
Score = 111 (44.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIR--VD--GDSTESASSMLDIHSLVISLNF 626
VG FV QYY +L + P+ +H+FY SS + VD G E+ DIH V+SLNF
Sbjct: 11 VGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF 70
Query: 627 TAIEIK 632
+ K
Sbjct: 71 SECHTK 76
>FB|FBgn0000377 [details] [associations]
symbol:crn "crooked neck" species:7227 "Drosophila
melanogaster" [GO:0007443 "Malpighian tubule morphogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0007422
"peripheral nervous system development" evidence=NAS] [GO:0048663
"neuron fate commitment" evidence=NAS] [GO:0007405 "neuroblast
proliferation" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007438 "oenocyte development"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:0008366 "axon ensheathment" evidence=IMP] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0051298 "centrosome
duplication" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 GO:GO:0005813
GO:GO:0051298 GO:GO:0016607 EMBL:AE014298 GO:GO:0007438
Gene3D:1.25.40.10 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
GO:GO:0008347 GO:GO:0072686 GO:GO:0007443 GO:GO:0000381
GO:GO:0008366 eggNOG:NOG327505 KO:K12869 OMA:KFTFAKI
GeneTree:ENSGT00550000074931 EMBL:X58374 EMBL:AL009195
EMBL:AY051666 PIR:T13427 RefSeq:NP_477118.1 UniGene:Dm.3140
ProteinModelPortal:P17886 SMR:P17886 DIP:DIP-17429N IntAct:P17886
MINT:MINT-282072 STRING:P17886 PaxDb:P17886
EnsemblMetazoa:FBtr0070418 GeneID:31208 KEGG:dme:Dmel_CG3193
CTD:12935 FlyBase:FBgn0000377 HOGENOM:HOG000264173
InParanoid:P17886 OrthoDB:EOG4J9KDW PhylomeDB:P17886
GenomeRNAi:31208 NextBio:772455 Bgee:P17886 GermOnline:CG3193
Uniprot:P17886
Length = 702
Score = 109 (43.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 59/248 (23%), Positives = 114/248 (45%)
Query: 169 EEMYKKAKEFDSKI---IGFETAI--RRPYFHVKPLSV--TELENWHNYLDFIERDGDFN 221
+E++K + + K G E I +R Y + + ++ T + W +YL IE +GD +
Sbjct: 283 QELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDRD 342
Query: 222 KVVKLYERCL--IACANYPEYWIRYV-LCMEASGSMDLAHNALARATHVF---VKRLP-- 273
++ + YER + + AN +W RY+ L + + +L R ++ ++ +P
Sbjct: 343 QIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPHK 402
Query: 274 -----EIHLFAARFKEQNGDIDGARAAYQLVHTETSPGLLEAIIK-HANMERRLGNLEDA 327
++ L A+F+ + ++ AR A L P + + + + ++E +L E
Sbjct: 403 QFTFSKLWLLYAQFEIRCKELQRARKALGLA-IGMCPR--DKLFRGYIDLEIQLREFERC 459
Query: 328 FSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSKP--L 385
LYE+ + E G E+ T M +A+ L + ++AR I ++ +L P L
Sbjct: 460 RMLYEKFL--EFGPENCVTW-MKFAELENLLG----DTDRARAIFELAVQQPRLDMPELL 512
Query: 386 LEALIHFE 393
+A I FE
Sbjct: 513 WKAYIDFE 520
Score = 77 (32.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 39 RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILEN-PIQQLDRYFSSF 96
R+FER + + G DY+ L+ + +E Q+E R +IY L++ P + F ++
Sbjct: 231 RVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYALDHLPKDRTQELFKAY 289
Score = 62 (26.9 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 58 WDKYIEYEYMQQEWSRVAMIYTRILEN 84
W KY ++E QQE R I+ R L+N
Sbjct: 79 WIKYAQWEEQQQEIQRARSIWERALDN 105
>TAIR|locus:2080853 [details] [associations]
symbol:AT3G51110 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;ISS]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 PROSITE:PS50293 SMART:SM00386 EMBL:CP002686
GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10 IPI:IPI00546615
RefSeq:NP_566944.1 UniGene:At.857 ProteinModelPortal:F4J390
SMR:F4J390 EnsemblPlants:AT3G51110.1 GeneID:824275
KEGG:ath:AT3G51110 OMA:ERSHTIF Uniprot:F4J390
Length = 413
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 65/298 (21%), Positives = 127/298 (42%)
Query: 125 PSETGAEVKANEEEVQPDATEQTSKPVSAGLTEAEELEKYIAVR----EEMYKKAKEFDS 180
P + AE E + D+ + +P +T+++EL +Y R E+ + AK
Sbjct: 15 PVQITAEQVLKEAREREDS--RILRPPKQKITDSDELAEYRLRRRKEFEDQIRGAKTNSQ 72
Query: 181 KIIGFETAIRRPYFHVKPLSVTE--LEN--------WHNYLDFIERDGDFNKVVKLYERC 230
+ + H + SV E LE+ W Y +F R+ N +++R
Sbjct: 73 VWVRYADWEESQKDHDRARSVWERALEDESYRNHTLWLKYAEFEMRNKSVNHARNVWDRA 132
Query: 231 LIACANYPEYWIRYVLCMEASGSMDLAHNALARATHVFVKRLPEIHLFAARFKEQNGDID 290
+ ++W +Y+ E G++D A R + + L +F+ + +I+
Sbjct: 133 VKILPRVDQFWYKYIHMEEILGNIDGARKIFERWMDWSPDQ--QAWLCFIKFELRYNEIE 190
Query: 291 GARAAYQ---LVHTETSPGLLEAIIKHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTL 347
+R+ Y+ L H + S + I++A E + + A +YE+AI + K E +
Sbjct: 191 RSRSIYERFVLCHPKAS-----SFIRYAKFEMKNSQVSLARIVYERAIEMLKDVE--EEA 243
Query: 348 PMLYAQYSRFLHLVSRNAEKARQILVDSLDHVQLSKP--LLEALIHFESIQSSPKQID 403
M++ ++ F L + E+AR + +LDH+ + L + + FE + + ID
Sbjct: 244 EMIFVAFAEFEELC-KEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGNKEGID 300
>POMBASE|SPAC15F9.03c [details] [associations]
symbol:nxt2 "nuclear transport factor Nxt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006606 "protein import
into nucleus" evidence=ISO] [GO:0008536 "Ran GTPase binding"
evidence=ISO] [GO:0031965 "nuclear membrane" evidence=ISO]
InterPro:IPR002075 Pfam:PF02136 PomBase:SPAC15F9.03c GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0031965 GO:GO:0006606
GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
HOGENOM:HOG000197024 OMA:MTFEGVQ OrthoDB:EOG4HHSBX PIR:T38039
RefSeq:XP_001713065.1 ProteinModelPortal:Q10100 SMR:Q10100
STRING:Q10100 EnsemblFungi:SPAC15F9.03c.1 GeneID:2542783
KEGG:spo:SPAC15F9.03c NextBio:20803827 Uniprot:Q10100
Length = 123
Score = 107 (42.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 29/116 (25%), Positives = 56/116 (48%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAIE 630
+ + F YYQ + Y + SM+ +G + ++++ ++SL F ++
Sbjct: 7 LATQFTQFYYQTFDSDRSQLSSLYRE-ESMLSFEGAQLQGTKAIVE---KLVSLPFQRVQ 62
Query: 631 --IKTINSLGSWN-GGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIF 683
I T+++ + G V+VMV+G + E +++ Q F L Y+VLND+F
Sbjct: 63 HRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLF 118
>TAIR|locus:2099926 [details] [associations]
symbol:AT3G55540 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0006810 "transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=ISS] InterPro:IPR002075
Pfam:PF02136 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 EMBL:AL132975
IPI:IPI00537140 PIR:T47693 RefSeq:NP_191113.1 UniGene:At.53937
ProteinModelPortal:Q9M2S5 SMR:Q9M2S5 PaxDb:Q9M2S5 PRIDE:Q9M2S5
EnsemblPlants:AT3G55540.1 GeneID:824719 KEGG:ath:AT3G55540
TAIR:At3g55540 eggNOG:NOG258130 HOGENOM:HOG000153240
InParanoid:Q9M2S5 OMA:EALANCF PhylomeDB:Q9M2S5
ProtClustDB:CLSN2915780 Genevestigator:Q9M2S5 Uniprot:Q9M2S5
Length = 334
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 575 FVGQYYQVLQQQPDLVHQ-FYSDASSMIRVDGDSTE-SASSMLDIHSLVISLNFTAIEIK 632
F+ Y+ L P++V +Y+D S M R D T S +S I ++S ++
Sbjct: 36 FLQSYFLNLGVYPEVVQMMWYADDSVMTRPGPDGTMMSFTSPEAIQEQIVSCDYEGASFD 95
Query: 633 TIN-SLGSWN----GGVLVMVSGSVKTKEFCRRRKFVQTFFLAP-QEKGYFVLNDIFHFL 686
++ + S N G +MV+G + K+ RR+FVQ+ +LA Q++ Y ++ND ++
Sbjct: 96 VMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRRFVQSLYLARRQDRSYAIVNDFLRYI 155
Query: 687 DEEPVYQHPAPVLSENKFDVQHDASSPIPEQAGL 720
D P P + E+ V+ P+ E+ GL
Sbjct: 156 DSIPAL----PSVPESAGFVKVYYELPMREELGL 185
>UNIPROTKB|F1P3Q8 [details] [associations]
symbol:CRNKL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
SMART:SM00386 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
GO:GO:0000245 OMA:KFTFAKI GeneTree:ENSGT00550000074931
EMBL:AADN02044253 EMBL:AADN02044254 IPI:IPI00599254
Ensembl:ENSGALT00000013732 Uniprot:F1P3Q8
Length = 704
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 62/277 (22%), Positives = 115/277 (41%)
Query: 207 WHNYLDFIERDG-DFNKVVKLYERCLIACAN----YPEYWIRYVLCMEASGSMDLAHNAL 261
W NY + E + D + ++Y+ C+ + + + W+ Y ++ LA AL
Sbjct: 393 WINYALYEELEAKDPERTRQVYQACIELLPHKKFTFAKIWLLYAQFEIRQKNLPLARRAL 452
Query: 262 ARATHVFVKRLPEIHLFAA--RFKEQNGDIDGARAAYQLVHTETSPGLLEAIIKHANMER 319
+ + + P+ LF + Q + D R Y+ E +P + IK A +E
Sbjct: 453 GTS----IGKCPKNKLFKGYIELELQLREFDRCRKLYEKF-LEFAPENCTSWIKFAELET 507
Query: 320 RLGNLEDAFSLYEQAIAIEKGKEHSQTLP-MLYAQYSRFLHLVSRNAEKARQILVDSLDH 378
LG+++ A ++YE AI+ + +P +L+ Y F + EK R + L
Sbjct: 508 ILGDIDRARAIYELAIS-----QPRLDMPEVLWKSYIDF-EIEQEEYEKTRNLYRRLLQR 561
Query: 379 VQLSKPLLEALIHFESIQSSPKQIDFLEQLVDKFLMSNSDSPSTANAAEREELSCVFLEF 438
Q K + + FE + + Q+ ++ +N + N E+EE + LE
Sbjct: 562 TQHVKVWI-SFAQFELSAGKEESLSKCRQIYEE---ANK---AMRNCEEKEE-RVMLLES 613
Query: 439 LGLFGDAQLIKKAEDRHARLFLPHRSTSELRKRHAED 475
F + ++R +L +P + + RK AED
Sbjct: 614 WKTFEEEFGTDSTKERIEKL-MPEK-IKKRRKLQAED 648
Score = 78 (32.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 39 RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILEN-PIQQLDRYFSSF- 96
+++ER + + G +++ L+ + ++E Q+E+ RV +IY L+ P Q F ++
Sbjct: 253 KVYERAVEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKQDAQNLFKNYT 312
Query: 97 ---KEFAASRPLSEL 108
K+F R + ++
Sbjct: 313 IFEKKFGDRRGIEDI 327
>DICTYBASE|DDB_G0278819 [details] [associations]
symbol:DDB_G0278819 "HAT repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 SMART:SM00386
dictyBase:DDB_G0278819 GO:GO:0005737 GenomeReviews:CM000152_GR
GO:GO:0016607 GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10
EMBL:AAFI02000024 GO:GO:0000245 eggNOG:NOG327505 KO:K12869
OMA:KFTFAKI RefSeq:XP_641986.1 ProteinModelPortal:Q54XP4
STRING:Q54XP4 PRIDE:Q54XP4 EnsemblProtists:DDB0233480
GeneID:8621718 KEGG:ddi:DDB_G0278819 ProtClustDB:CLSZ2729102
Uniprot:Q54XP4
Length = 705
Score = 121 (47.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 56/223 (25%), Positives = 100/223 (44%)
Query: 207 WHNYLDFIERDGDFNKVVKLYERCL--IACANYPEYWIRYV-LCMEASGSMDLAHNALAR 263
W +YL E +G+ K ++YER + + N ++W RY+ L + + +L + R
Sbjct: 327 WFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMER 386
Query: 264 ATHVF---VKRLP-------EIHLFAARFKEQNGDIDGARAAY-QLVHTETSPGLLEAII 312
A V+ +K +P +I + A F+ + ++D AR Y Q + + + I
Sbjct: 387 ARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNPKSKIFDQYI 446
Query: 313 KHANMERRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLYAQYSRFLHLVSRNAE--KARQ 370
H +E LGN + +LYE+ + I +P + +F L + E +AR
Sbjct: 447 -HLEIE--LGNFDRVRTLYEKYLEI---------MPDNCDAWCKFAQLETELGETVRARA 494
Query: 371 ILVDSLDHVQLSKPLLEALIHFESIQSSPKQIDFLEQLVDKFL 413
I ++ L +P + +S + KQ DF++QL K L
Sbjct: 495 IFELAIQQPNLDRPEVVWKDFIDS-EIQLKQFDFVKQLYRKLL 536
Score = 58 (25.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 40 LFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWSRVAMIYTRILEN-PIQQLDRYFSSFKE 98
+F+R + ++G D L+ + ++E +E R +IY +++ P + F +F
Sbjct: 231 IFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTN 290
Query: 99 F 99
F
Sbjct: 291 F 291
>TAIR|locus:2015914 [details] [associations]
symbol:NTF2A "AT1G27310" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0006606 "protein import into nucleus"
evidence=IGI;ISS;IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IGI] [GO:0008536 "Ran GTPase
binding" evidence=IGI;IPI] [GO:0006605 "protein targeting"
evidence=RCA] [GO:0006869 "lipid transport" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR002075 Pfam:PF02136 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005635 GO:GO:0006606
EMBL:AC004557 GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 HOGENOM:HOG000197024 HSSP:P33331 OMA:CKHNITT
ProtClustDB:CLSN2679350 EMBL:AY042889 EMBL:AY072473 IPI:IPI00540337
PIR:H86398 RefSeq:NP_174051.1 UniGene:At.48239 UniGene:At.66864
ProteinModelPortal:Q9FZK4 SMR:Q9FZK4 STRING:Q9FZK4 PaxDb:Q9FZK4
PRIDE:Q9FZK4 EnsemblPlants:AT1G27310.1 GeneID:839620
KEGG:ath:AT1G27310 TAIR:At1g27310 InParanoid:Q9FZK4
PhylomeDB:Q9FZK4 Genevestigator:Q9FZK4 Uniprot:Q9FZK4
Length = 122
Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
Identities = 35/117 (29%), Positives = 55/117 (47%)
Query: 571 VGSYFVGQYYQVLQ-QQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAI 629
V FV YY +P LV Y + S M+ +G + + +++ + + L F
Sbjct: 6 VAKAFVEHYYSTFDANRPGLV-SLYQEGS-MLTFEGQKIQGSQNIV---AKLTGLPFQQC 60
Query: 630 E--IKTINSLGSWN-GGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIF 683
+ I T++ S GG+LV VSG+++ KF Q F L + Y+V NDIF
Sbjct: 61 KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLISNQGNYYVFNDIF 117
>TAIR|locus:2200066 [details] [associations]
symbol:NTL "NTF2-like" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=ISS] InterPro:IPR002075 Pfam:PF02136
EMBL:CP002684 GO:GO:0006810 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 IPI:IPI00938605 RefSeq:NP_001154326.1
UniGene:At.51573 ProteinModelPortal:F4I8X9 SMR:F4I8X9
EnsemblPlants:AT1G11570.2 GeneID:837700 KEGG:ath:AT1G11570
OMA:TEMERCH ArrayExpress:F4I8X9 Uniprot:F4I8X9
Length = 132
Score = 102 (41.0 bits), Expect = 0.00026, P = 0.00025
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 570 QVGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAI 629
+V S FV YY + + Y+ +S++ +G + + I + + L F
Sbjct: 11 EVASAFVNHYYHLFDNDRSSLSSLYNP-TSLLTFEGQTIYGVDN---ISNKLKQLPFDQC 66
Query: 630 E--IKTINS----LGSWNGGVLVMVSGSVKTKEFCRRRKFVQTFFLAPQEKG-YFVLNDI 682
I T++S + GG+LV VSGS++ +F QTF L P +G +FV N++
Sbjct: 67 HHLISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQTFHLIPVLQGSFFVQNEM 126
Query: 683 F 683
F
Sbjct: 127 F 127
>TAIR|locus:2142519 [details] [associations]
symbol:AT5G10350 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 EMBL:AL353995 eggNOG:NOG238057 GO:GO:0008143
KO:K14396 HOGENOM:HOG000208465 ProtClustDB:CLSN2715990
EMBL:BT003893 EMBL:BT005003 IPI:IPI00533153 PIR:T50004
RefSeq:NP_196597.1 UniGene:At.32388 ProteinModelPortal:Q9LX90
SMR:Q9LX90 IntAct:Q9LX90 STRING:Q9LX90 PaxDb:Q9LX90 PRIDE:Q9LX90
EnsemblPlants:AT5G10350.1 GeneID:830899 KEGG:ath:AT5G10350
TAIR:At5g10350 InParanoid:Q9LX90 OMA:MAANQEG PhylomeDB:Q9LX90
ArrayExpress:Q9LX90 Genevestigator:Q9LX90 Uniprot:Q9LX90
Length = 217
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 875 GLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDI 934
G +E + +SVYV N+ T E++ FQ G + + + G +A+VEF ++
Sbjct: 82 GKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKG--FAYVEFVEV 139
Query: 935 SGVQNAIQASPIQLAGRQVYIEERRPN 961
VQ A+Q + +L GRQ+ + +R N
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTN 166
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 129 GAEV-KANEEEVQPDATEQTSKPVSAGLTEAEELEKYIAVREEMYKKAKEFDSKI 182
G E+ + + +V PD S +TE E+++ + EE +E +K+
Sbjct: 10 GGEIPEVGDTDV-PDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKV 63
>DICTYBASE|DDB_G0276425 [details] [associations]
symbol:nutf2 "nuclear transport factor 2"
species:44689 "Dictyostelium discoideum" [GO:0006810 "transport"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0006606 "protein import into
nucleus" evidence=ISS] [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002075 Pfam:PF02136
dictyBase:DDB_G0276425 GO:GO:0005737 GO:GO:0005635
GenomeReviews:CM000151_GR GO:GO:0006606 GO:GO:0008536
EMBL:AAFI02000015 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 OMA:MTFEGVQ RefSeq:XP_643125.1 HSSP:Q5CQI4
ProteinModelPortal:Q86HW7 IntAct:Q86HW7 STRING:Q86HW7
EnsemblProtists:DDB0233957 GeneID:8620530 KEGG:ddi:DDB_G0276425
Uniprot:Q86HW7
Length = 127
Score = 101 (40.6 bits), Expect = 0.00033, P = 0.00033
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 571 VGSYFVGQYYQVLQQQPDLVHQFYSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAIE 630
VG FV YY + + Q Y +++ +G A +++ H + + T +
Sbjct: 11 VGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTW-EGKFLSGADAIVK-HIVELPFQQTNRK 68
Query: 631 IKTINSLGSWNGGVLVMVSGS-VKTKEFCRRRKFVQTFFLAPQEKGYFVLNDIFHFL 686
I +I+ ++ G+++ V+G+ + E + KFVQ F LA + ++ND F +
Sbjct: 69 INSIDCQQTYQPGIMITVTGTLIIDGEAKNQLKFVQVFNLASNNGSFLLINDFFRLV 125
>WB|WBGene00003904 [details] [associations]
symbol:pabp-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040019
"positive regulation of embryonic development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0040011 GO:GO:0000003 GO:GO:0003676 GO:GO:0040019 EMBL:Z81037
eggNOG:NOG238057 KO:K14396 HOGENOM:HOG000208465
GeneTree:ENSGT00390000001517 OMA:FETEGQA PIR:T19356
RefSeq:NP_492504.1 ProteinModelPortal:Q93233 SMR:Q93233
DIP:DIP-26233N IntAct:Q93233 MINT:MINT-1047210 STRING:Q93233
PaxDb:Q93233 EnsemblMetazoa:C17E4.5.1 EnsemblMetazoa:C17E4.5.2
GeneID:172768 KEGG:cel:CELE_C17E4.5 UCSC:C17E4.5 CTD:172768
WormBase:C17E4.5 InParanoid:Q93233 NextBio:876929 Uniprot:Q93233
Length = 205
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 878 EGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVR-NRKDVVGVCYAFVEFEDISG 936
E + KSVYV N+ TA EIE+ F G + V ++ +R +A+VEF + G
Sbjct: 74 EADAKSVYVGNVDYGATAEEIEQHFHGCGSVSR--VTIQCDRFSGHPKGFAYVEFTEKEG 131
Query: 937 VQNAIQASPIQLAGRQVYIEERRPN 961
+QNA+ + L GRQ+ ++ +R N
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTN 156
>WB|WBGene00004305 [details] [associations]
symbol:ran-4 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0060465 "pharynx development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR002075
Pfam:PF02136 GO:GO:0009792 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 GO:GO:0060465 InterPro:IPR018222
PROSITE:PS50177 EMBL:Z75546 eggNOG:NOG286483
GeneTree:ENSGT00510000047030 HOGENOM:HOG000197024 OMA:MTFEGVQ
PIR:T23921 RefSeq:NP_492322.1 ProteinModelPortal:Q21735 SMR:Q21735
IntAct:Q21735 STRING:Q21735 PaxDb:Q21735 EnsemblMetazoa:R05D11.3.1
EnsemblMetazoa:R05D11.3.2 GeneID:172648 KEGG:cel:CELE_R05D11.3
UCSC:R05D11.3.1 CTD:172648 WormBase:R05D11.3 InParanoid:Q21735
NextBio:876417 Uniprot:Q21735
Length = 133
Score = 99 (39.9 bits), Expect = 0.00053, P = 0.00053
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 594 YSDASSMIRVDGDSTESASSMLDIHSLVISLNFTAIE--IKTINSLGSWNGGVLVMVSGS 651
Y +S + +G + +L + +L FT I+ I I+S ++G + VMV G
Sbjct: 38 YDPENSYMTFEGQQAKGRDGILQKFT---TLGFTKIQRAITVIDSQPLYDGSIQVMVLGQ 94
Query: 652 VKTKEFCRRRKFVQTFFLAPQEKG-YFVLNDIFHFLD 687
+KT E F Q F L P +G YF+ N+IF LD
Sbjct: 95 LKTDED-PINPFSQVFILRPNNQGSYFIGNEIFR-LD 129
>TAIR|locus:2171780 [details] [associations]
symbol:AT5G65260 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AB013395 eggNOG:NOG238057
HOGENOM:HOG000208465 HSSP:P33240 OMA:GRANYYA EMBL:AF386984
EMBL:BT000018 IPI:IPI00548869 RefSeq:NP_201329.1 UniGene:At.24028
UniGene:At.9297 ProteinModelPortal:Q9FJN9 SMR:Q9FJN9 IntAct:Q9FJN9
STRING:Q9FJN9 PaxDb:Q9FJN9 PRIDE:Q9FJN9 EnsemblPlants:AT5G65260.1
GeneID:836651 KEGG:ath:AT5G65260 TAIR:At5g65260 InParanoid:Q9FJN9
PhylomeDB:Q9FJN9 ProtClustDB:CLSN2715990 ArrayExpress:Q9FJN9
Genevestigator:Q9FJN9 Uniprot:Q9FJN9
Length = 220
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 875 GLDEGEVKSVYVRNLPSTVTAFEIEEEFQNFGRIKPDGVFVRNRKDVVGVCYAFVEFEDI 934
G +E + +SV+V N+ T E+++ FQ G + + G +A+VEF ++
Sbjct: 85 GKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKG--FAYVEFVEV 142
Query: 935 SGVQNAIQASPIQLAGRQVYIEERRPN 961
VQ A+Q + +L GRQ+ + ++R N
Sbjct: 143 EAVQEALQLNESELHGRQLKVLQKRTN 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1017 881 0.00086 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 624 (66 KB)
Total size of DFA: 420 KB (2203 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 78.61u 0.11s 78.72t Elapsed: 00:00:04
Total cpu time: 78.64u 0.11s 78.75t Elapsed: 00:00:05
Start: Mon May 20 18:22:13 2013 End: Mon May 20 18:22:18 2013