Your job contains 1 sequence.
>001761
MMKPKPFKEAKVYMSRNLVAPEIFDALLDALKLNGAEVELCCDPSRTGPNDFHVISSSDH
EKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCCLAMDGVKVIASGFDVDEKFKIEK
LVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNEHRVVPQE
SYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNF
PYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKTVMGSLTK
QHSQVKVIGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPVVSKDGA
IEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSR
YVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDCDRERREISILQRHVAY
DLLLPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRSTNSGIGMPLSLEENREER
AEIHMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVFRGKIFR
FSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSHWI
RSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFM
EKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHD
REAGLCTVSQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEAN
QTSAHNKRARISEDEDHDTLPGVHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVIEDL
VEQTSKVQDLKSPERSECDKSLFPSDCSVLGQNHTDFNSVIGLSRQWSNRTLKKNDIQNP
FNSKGVRSGIYEPFSETQTESQVVSYEEDLSGRQKIIDRAKSEAACLEKLVQLRERS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001761
(1017 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031412 - symbol:MEI1 "AT1G77320" species:3702... 1572 7.8e-271 2
UNIPROTKB|Q92547 - symbol:TOPBP1 "DNA topoisomerase 2-bin... 303 1.8e-43 3
UNIPROTKB|Q800K6 - symbol:topbp1-A "DNA topoisomerase 2-b... 278 2.4e-41 2
UNIPROTKB|G3X684 - symbol:TOPBP1 "Uncharacterized protein... 289 5.4e-40 2
MGI|MGI:1920018 - symbol:Topbp1 "topoisomerase (DNA) II b... 280 1.7e-38 2
RGD|1562949 - symbol:Topbp1 "topoisomerase (DNA) II bindi... 280 1.3e-36 3
FB|FBgn0002878 - symbol:mus101 "mutagen-sensitive 101" sp... 393 5.5e-31 2
UNIPROTKB|E1BSJ5 - symbol:TOPBP1 "Uncharacterized protein... 303 3.1e-29 2
MGI|MGI:95281 - symbol:Ect2 "ect2 oncogene" species:10090... 224 1.8e-14 1
RGD|1308524 - symbol:Ect2 "epithelial cell transforming s... 222 1.8e-14 1
UNIPROTKB|E1BWT7 - symbol:ECT2 "Uncharacterized protein" ... 223 1.9e-13 2
UNIPROTKB|Q9H8V3 - symbol:ECT2 "Protein ECT2" species:960... 224 3.1e-13 2
UNIPROTKB|G5E9L8 - symbol:ECT2 "Protein ECT2" species:960... 224 3.2e-13 2
ASPGD|ASPL0000016982 - symbol:AN10434 species:162425 "Eme... 145 1.3e-11 2
WB|WBGene00009507 - symbol:mus-101 species:6239 "Caenorha... 143 1.9e-11 3
UNIPROTKB|F1MJ58 - symbol:LOC100849441 "Uncharacterized p... 201 4.3e-11 2
UNIPROTKB|Q6ZW49 - symbol:PAXIP1 "PAX-interacting protein... 145 5.0e-11 3
CGD|CAL0004594 - symbol:ESC4 species:5476 "Candida albica... 132 1.1e-10 2
UNIPROTKB|Q5ALY1 - symbol:ESC4 "Putative uncharacterized ... 132 1.1e-10 2
ASPGD|ASPL0000001078 - symbol:AN6896 species:162425 "Emer... 144 1.9e-10 3
MGI|MGI:1890430 - symbol:Paxip1 "PAX interacting (with tr... 144 3.0e-10 3
UNIPROTKB|F1PT21 - symbol:ECT2 "Uncharacterized protein" ... 191 5.1e-10 2
UNIPROTKB|J9NX43 - symbol:ECT2 "Uncharacterized protein" ... 191 5.5e-10 2
RGD|1307547 - symbol:Paxip1 "PAX interacting (with transc... 130 1.5e-09 2
UNIPROTKB|F1P482 - symbol:PAXIP1 "Uncharacterized protein... 144 1.8e-09 2
POMBASE|SPAC23C4.18c - symbol:rad4 "BRCT domain protein R... 158 2.4e-09 2
ZFIN|ZDB-GENE-040831-2 - symbol:ect2 "epithelial cell tra... 185 8.5e-09 2
UNIPROTKB|G4NCT3 - symbol:MGG_01032 "BRCT domain-containi... 136 5.5e-08 2
UNIPROTKB|A0JNA8 - symbol:PAXIP1 "PAX-interacting protein... 128 5.5e-08 2
UNIPROTKB|G3MZP9 - symbol:PAXIP1 "PAX-interacting protein... 122 2.2e-07 2
ZFIN|ZDB-GENE-041010-214 - symbol:paxip1 "PAX interacting... 125 7.8e-07 2
TAIR|locus:2132198 - symbol:AT4G02110 "AT4G02110" species... 140 3.0e-05 1
UNIPROTKB|F5H8D7 - symbol:XRCC1 "DNA repair protein XRCC1... 97 0.00012 2
UNIPROTKB|P18887 - symbol:XRCC1 "DNA repair protein XRCC1... 97 0.00014 2
MGI|MGI:99137 - symbol:Xrcc1 "X-ray repair complementing ... 95 0.00018 2
TAIR|locus:2097149 - symbol:AT3G43930 "AT3G43930" species... 136 0.00021 2
FB|FBgn0003041 - symbol:pbl "pebble" species:7227 "Drosop... 144 0.00022 2
RGD|619823 - symbol:Xrcc1 "X-ray repair complementing def... 93 0.00037 2
UNIPROTKB|Q9ESZ0 - symbol:Xrcc1 "DNA repair protein XRCC1... 93 0.00037 2
WB|WBGene00002297 - symbol:ect-2 species:6239 "Caenorhabd... 120 0.00060 2
>TAIR|locus:2031412 [details] [associations]
symbol:MEI1 "AT1G77320" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0007143 "female meiosis" evidence=IMP]
InterPro:IPR001357 Pfam:PF00533 EMBL:CP002684 GO:GO:0006974
GO:GO:0016853 GO:GO:0007143 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 KO:K10728 IPI:IPI00533208 RefSeq:NP_177856.2
UniGene:At.34497 ProteinModelPortal:F4I701 SMR:F4I701 PRIDE:F4I701
EnsemblPlants:AT1G77320.1 GeneID:844068 KEGG:ath:AT1G77320
OMA:CCLAMDG Uniprot:F4I701
Length = 972
Score = 1572 (558.4 bits), Expect = 7.8e-271, Sum P(2) = 7.8e-271
Identities = 369/775 (47%), Positives = 483/775 (62%)
Query: 245 EGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKTVMGSLTKQHSQ 304
EGDK+KVA++WGHI I+ RKWF QS+ ++ CLNEESY V +GS+
Sbjct: 231 EGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNEESYPV-----------LGSIPLTRG- 278
Query: 305 VKVIG--NALSAPSSMATESNLLS-VSCTGFADQDLEATFSQSM-PSMYMDAPVVSKDGA 360
V+ +G N L S AT S S VSC D D+EA+ SQ++ P+ + V + G
Sbjct: 279 VRDLGVHNGLEKFPSAATASAADSYVSCAQSRDSDIEASASQNVFPTSMNPSTDVKEPGG 338
Query: 361 IEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSR 420
PTA+ + E N D C A DS+SEDNDLYLSDCRI L+GFEASEMRKL +VRRGGGSR
Sbjct: 339 --GPTARPQ-EQNIDGCTARDSESEDNDLYLSDCRIFLLGFEASEMRKLAKLVRRGGGSR 395
Query: 421 YVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDCDRERREISILQRHVAY 480
Y+ N +THIVVGT SE++KRE RS+A+ G+IQVV +WLEDCDRE++EI + + A
Sbjct: 396 YMLLNERMTHIVVGTPSESEKREARSVAASGVIQVVIPSWLEDCDREKKEIPVHNIYTAN 455
Query: 481 DLLLPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRSTNSGIGMPLSLEENREER 540
L+LP++SA TKG+ +++ Q K + + ++ D RS N G L +N+E
Sbjct: 456 HLILPRDSACLTKGSFARMSSMEQTKNTHDQ-TMVYDSSSRSINVSNGPATLLGKNKEAM 514
Query: 541 AEIHMKRESSLEATAV-PSQ-QNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVFRGKI 598
E K E V P+Q + L+S ++ E+K Q + +F Q+ Q K S+VF+G+
Sbjct: 515 QEFGRKDEIHTGRKIVSPTQKETLISLVTCESKEQRSIQCEFSGQNDQERK-SSVFKGET 573
Query: 599 FRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSH 658
F FS+SFPEDRR +IV+WVNQG GEVVND N HFTIECHG +S + ++T YVSSH
Sbjct: 574 FCFSHSFPEDRRPQIVEWVNQGGGEVVNDPLINNAHFTIECHGGF-QSTETTQTIYVSSH 632
Query: 659 WIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAK 718
W+R+CL+ GCLL V SHILYSPL CQTPLPGFE C SQ+ EK+ LLRNL VLGA
Sbjct: 633 WVRNCLKVGCLLAVSSHILYSPLPCQTPLPGFESLCICSSQHNEKNVELLRNLSVVLGAD 692
Query: 719 FMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTT 778
F+E+LT+KVTHL+C FA G KY A KWGI S+T +W+YECVRQN+VV D+F P+E+TT
Sbjct: 693 FVERLTRKVTHLICNFAKGDKYVRASKWGIISVTPDWLYECVRQNQVVCTDNFHPRELTT 752
Query: 779 HDREAGLCTVSQFPMQSVQMSSADE---PSQFINPLGGLQSSSPQTMVHKIDDITRSDNL 835
DREAG SQF Q V M+S D P +QS + ++ K + R +
Sbjct: 753 QDREAG----SQFHTQFVPMASRDSMSLPVSHSEDREKIQSFAGKSGCGKGEVYNRLGEI 808
Query: 836 RDEANQTSAHNKRARISEDEDHDTLPGVHLKDPHRSTNYNGDSM--SKD--NG-EVPHIG 890
E QT K + + ++ D P L +++GD + D +G EVP
Sbjct: 809 GKE--QTFPSKKAKLLRDGQESDVFPVRELPSNCDRPSHSGDGIVTGYDVASGREVP--- 863
Query: 891 SDVAAVIEDLVEQTSKVQDLKSPERSECDKSLFPSDCSVLGQNHTDFNSVIGLSRQWSNR 950
DVA IEDL+EQTSK+QD KSP R +K+ F S Q +T +SV GLSR W NR
Sbjct: 864 -DVADTIEDLLEQTSKIQDQKSPGRI-LEKTHF----STSEQYNTGNHSVTGLSRHWINR 917
Query: 951 TLKKNDIQNPFNSKGVRSGIYEPFSETQTESQVVSYEEDLSGRQKIIDRAKSEAA 1005
K +D+ +P + Y FSETQTESQVV YEEDLSGRQ +IDR ++ ++
Sbjct: 918 VHKNDDMGSPPGD--ATTDTYGNFSETQTESQVVGYEEDLSGRQMLIDRVRTRSS 970
Score = 1056 (376.8 bits), Expect = 7.8e-271, Sum P(2) = 7.8e-271
Identities = 198/280 (70%), Positives = 232/280 (82%)
Query: 7 FKEAKVYMSRNLVAPEIFDALLDALKLNGAEVELCCDPSRTGPNDFHVISSSDHEKFEDL 66
FK A V+MSRNLV PE+FD LLDA KLNGAE+ LCCDPSR+GP+DFHVI+S DHEKF+DL
Sbjct: 7 FKGANVFMSRNLVPPEVFDTLLDAFKLNGAEIFLCCDPSRSGPSDFHVIASPDHEKFKDL 66
Query: 67 RAKGCNLLGPQCVLSCAKENRALPKQGFTCCLAMDGVKVIASGFDVDEKFKIEKLVTAMG 126
+AKGCNL+GPQC L CAKE R LP++GFTCCLAMDG+KV+ASGF VDEK KI++LVT+MG
Sbjct: 67 KAKGCNLIGPQCALFCAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKVKIKELVTSMG 126
Query: 127 GVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNEHRVVPQESYKVLP 186
GVL ++A+ DV+FVIVKNVLAAKYKWALN KKPIVT+NWL++CWNEHRVVPQE YK+ P
Sbjct: 127 GVLLSRASSDVNFVIVKNVLAAKYKWALN--KKPIVTLNWLHRCWNEHRVVPQEPYKIPP 184
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
FSGL ICVTRIPADERK MEK+I + GG YS ELTK CTHLI D + EG
Sbjct: 185 FSGLTICVTRIPADERKGMEKVISEYGGSYSAELTKSCTHLIADAA------------EG 232
Query: 247 DKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDS 286
DK+KVA++WGHI I+ RKWF QS+ ++ CLNEESY V S
Sbjct: 233 DKYKVARKWGHIQIVTRKWFQQSIDKKVCLNEESYPVLGS 272
>UNIPROTKB|Q92547 [details] [associations]
symbol:TOPBP1 "DNA topoisomerase 2-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0016605 "PML body" evidence=IDA] [GO:0005694
"chromosome" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006259 "DNA metabolic process" evidence=TAS] [GO:0008022
"protein C-terminus binding" evidence=TAS] InterPro:IPR001357
Pfam:PF00533 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0016605 GO:GO:0006281 GO:GO:0005815 GO:GO:0010212
GO:GO:0001673 GO:GO:0000794 GO:GO:0008022 GO:GO:0000922
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
Pathway_Interaction_DB:bard1pathway EMBL:AC016255 PDB:3AL3
PDBsum:3AL3 InterPro:IPR016126 SUPFAM:SSF48201 eggNOG:NOG288412
CTD:11073 HOVERGEN:HBG067053 KO:K10728 InterPro:IPR026993
PANTHER:PTHR13561:SF6 EMBL:AB019397 EMBL:D87448 EMBL:AK302584
EMBL:AC083905 IPI:IPI00293921 RefSeq:NP_008958.2 UniGene:Hs.593379
PDB:1WF6 PDB:2XNH PDB:2XNK PDB:3AL2 PDB:3JVE PDB:3OLC PDB:3PD7
PDBsum:1WF6 PDBsum:2XNH PDBsum:2XNK PDBsum:3AL2 PDBsum:3JVE
PDBsum:3OLC PDBsum:3PD7 ProteinModelPortal:Q92547 SMR:Q92547
DIP:DIP-24263N IntAct:Q92547 MINT:MINT-275958 STRING:Q92547
PhosphoSite:Q92547 DMDM:296453012 PaxDb:Q92547 PRIDE:Q92547
Ensembl:ENST00000260810 GeneID:11073 KEGG:hsa:11073 UCSC:uc003eps.3
GeneCards:GC03M133319 H-InvDB:HIX0003693 HGNC:HGNC:17008
HPA:CAB022451 MIM:607760 neXtProt:NX_Q92547 PharmGKB:PA134934073
HOGENOM:HOG000154662 InParanoid:Q92547 OMA:CAQEYKH
OrthoDB:EOG4FXR6Q EvolutionaryTrace:Q92547 GenomeRNAi:11073
NextBio:42094 ArrayExpress:Q92547 Bgee:Q92547 CleanEx:HS_TOPBP1
Genevestigator:Q92547 GermOnline:ENSG00000163781 Uniprot:Q92547
Length = 1522
Score = 303 (111.7 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 88/311 (28%), Positives = 152/311 (48%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F+ L+ GC ++GPQ V+ C R +P+ + M V + + + +++ ++ K
Sbjct: 68 FDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEKREEVHKY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWN---EHRV-- 176
V MGG + + V+ +I V + KY A N LKKPI+ +W+ W E ++
Sbjct: 128 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAAN-LKKPILLPSWIKTLWEKSQEKKITR 186
Query: 177 ---VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT-KKCTHLICDIS 232
+ E +K F G +ICVT + +RKE+++L V++GG+Y +L +CTHLI
Sbjct: 187 YTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQ-- 244
Query: 233 FTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKK 292
P+G K++ AKRW ++H + +WF S+ + C +E Y + + K
Sbjct: 245 ----------EPKGQKYECAKRW-NVHCVTTQWFFDSIEKGFCQDESIYKTEPRPEA--K 291
Query: 293 TVMGSLTKQHSQVKVIGN-ALSAPSSMAT-ESNLLSVSCTGFADQDLEATFS--QSMPSM 348
T+ S T SQ+ I + LS S+++ ++ +S S + LE T +++
Sbjct: 292 TMPNSSTPT-SQINTIDSRTLSDVSNISNINASCVSESICNSLNSKLEPTLENLENLDVS 350
Query: 349 YMDAPVVSKDG 359
AP DG
Sbjct: 351 AFQAPEDLLDG 361
Score = 266 (98.7 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 117/488 (23%), Positives = 205/488 (42%)
Query: 311 ALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPVVSKDGAIEAPTAQTRN 370
A + P+S S + ++ +D + S S ++ S + +E PT + N
Sbjct: 290 AKTMPNSSTPTSQINTIDSRTLSDV---SNISNINASCVSESICNSLNSKLE-PTLE--N 343
Query: 371 ESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTH 430
N DV Q+ + DL L CRI L GF ++ KL ++ GGG R+ N +TH
Sbjct: 344 LENLDVSAF---QAPE-DL-LDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTH 398
Query: 431 IVVGTLSEADKREVRSLASLGIIQVVKSTWLEDCDRERREISILQR-HVAYDLL-LPKES 488
++VG + K+ A VV + WL +C + +S H Y + +P
Sbjct: 399 VIVGDYDDELKQFWNKSAHRP--HVVGAKWLLECFSKGYMLSEEPYIHANYQPVEIPVSH 456
Query: 489 AWSTKGAPLCTNNLNQGKES---SVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHM 545
+K A L N + K+ S +H + +++L +G ++ E + A
Sbjct: 457 KPESKAALLKKKNSSFSKKDFAPSEKHEQADEDLLSQYENGSS---TVVEAKTSEA---- 509
Query: 546 KRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVFRGKIFRFSNSF 605
R + A P + +L +EN++ + V + + +F K F F
Sbjct: 510 -RPFNDSTHAEPLNDSTHISLQEENQSSV----SHCVPDVSTITEEGLFSQKSFLVLG-F 563
Query: 606 PEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTY---VSSHWIRS 662
+ + I + + G++++ ++ T+ + V+P E T V++ W+ +
Sbjct: 564 SNENESNIANIIKENAGKIMSLLSR-----TVADYAVVPLLGCEVEATVGEVVTNTWLVT 618
Query: 663 CLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEK 722
C++ L D S+ L++P+ T + E SQ ++ L L +LGA E
Sbjct: 619 CIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAEKESLTFLANLLGASVQEY 678
Query: 723 LTKKV---------THLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSP 773
+K THL+ K GG KYEAA KW +P++T W+ E R + HF
Sbjct: 679 FVRKSNAKKGMFASTHLILKERGGSKYEAAKKWNLPAVTIAWLLETARTGKRADESHFLI 738
Query: 774 KEVTTHDR 781
+ T +R
Sbjct: 739 ENSTKEER 746
Score = 75 (31.5 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 57/251 (22%), Positives = 102/251 (40%)
Query: 396 IVLVGFEASEMRKLVNMVRRGGGSRYV-SYNNGLTHIVVGTLSEADKREVRSLASLGIIQ 454
+V V + S+ + +N + G+ Y S++ +TH + RE +S+ G+
Sbjct: 909 VVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGV-H 967
Query: 455 VVKSTWLEDCDRERREI-SILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQGKESSVRHS 513
+V WL DC +E + + L H Y+ PK S L + + G+ + R
Sbjct: 968 IVSEHWLLDCAQECKHLPESLYPHT-YN---PKMS--------LDISAVQDGRLCNSR-L 1014
Query: 514 LSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNLLS-ALSDENKT 572
LS+ + ST PL LEEN + + K + + + +L+ L
Sbjct: 1015 LSA---VSSTKDDEPDPLILEENDVDNMATNNKESAPSNGSGKNDSKGVLTQTLEMRENF 1071
Query: 573 QLRTKEDFRVQSL---QNMKLSTVFRGKIFRFSNSFPEDRRA------EIVQWVNQGRGE 623
Q + +E S+ Q + S G ++S P+ R+ +++ + Q R
Sbjct: 1072 QKQLQEIMSATSIVKPQGQRTSLSRSG--CNSASSTPDSTRSARSGRSRVLEALRQSRQT 1129
Query: 624 V--VNDDAKQN 632
V VN + QN
Sbjct: 1130 VPDVNTEPSQN 1140
Score = 71 (30.1 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 30/135 (22%), Positives = 63/135 (46%)
Query: 684 QTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGG---LKY 740
+ P P + CVS+ K + L + LGA + + VTH + + +Y
Sbjct: 900 EAPKP-LHKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREY 958
Query: 741 EAACKWGIPSITSEWIYECVRQNEVV--SL-DH-FSPK---EVTTHDREAGLCTVSQFPM 793
++ + G+ ++ W+ +C ++ + + SL H ++PK +++ ++ LC S+ +
Sbjct: 959 KSVKERGVHIVSEHWLLDCAQECKHLPESLYPHTYNPKMSLDISAV-QDGRLCN-SRL-L 1015
Query: 794 QSVQMSSADEPSQFI 808
+V + DEP I
Sbjct: 1016 SAVSSTKDDEPDPLI 1030
Score = 40 (19.1 bits), Expect = 7.6e-20, Sum P(3) = 7.6e-20
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 645 KSADASETTYVSSHWIRSCLED 666
KS VS HW+ C ++
Sbjct: 959 KSVKERGVHIVSEHWLLDCAQE 980
Score = 39 (18.8 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 776 VTTHDREAGLCTVSQFPMQSVQMSSADEPSQFIN 809
V+ H R+ P+Q D PS+F++
Sbjct: 795 VSQHARQVAASPAVGQPLQKEPSLHLDTPSKFLS 828
Score = 37 (18.1 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 732 CKFAGGLKYEAACKWGIPSI 751
C+ AG E +WG SI
Sbjct: 1337 CRTAGHFVQEEDYEWGSSSI 1356
>UNIPROTKB|Q800K6 [details] [associations]
symbol:topbp1-A "DNA topoisomerase 2-binding protein 1-A"
species:8355 "Xenopus laevis" [GO:0000076 "DNA replication
checkpoint" evidence=IMP] [GO:0000785 "chromatin" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006270 "DNA replication initiation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0019900 "kinase
binding" evidence=IPI] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IDA]
[GO:0035563 "positive regulation of chromatin binding"
evidence=IMP] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IDA] [GO:0071163 "DNA replication preinitiation
complex assembly" evidence=IMP] [GO:0071165 "GINS complex assembly"
evidence=IMP] [GO:0071168 "protein localization to chromatin"
evidence=IMP] [GO:0005656 "pre-replicative complex" evidence=IMP]
[GO:0006267 "pre-replicative complex assembly" evidence=IMP]
[GO:0006271 "DNA strand elongation involved in DNA replication"
evidence=IMP] InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006281 GO:GO:0000785
GO:GO:0045860 GO:GO:0003682 GO:GO:0006974 GO:GO:0005815
GO:GO:0007049 GO:GO:0006270 GO:GO:0033138 GO:GO:0000922
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0000076
GO:GO:0071163 GO:GO:0030174 GO:GO:0035563 GO:GO:0071168
GO:GO:0071165 EMBL:AB091779 EMBL:BC170556 EMBL:BC170557
RefSeq:NP_001082568.1 UniGene:Xl.11481 ProteinModelPortal:Q800K6
IntAct:Q800K6 GeneID:398573 KEGG:xla:398573 CTD:11073
Xenbase:XB-GENE-990641 HOVERGEN:HBG067053 KO:K10728
InterPro:IPR026993 PANTHER:PTHR13561:SF6 Uniprot:Q800K6
Length = 1513
Score = 278 (102.9 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 135/537 (25%), Positives = 228/537 (42%)
Query: 387 NDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRS 446
+DL L CRI L GF ++ KL ++ GGG R+ +THI+VG E K+ +
Sbjct: 356 DDL-LDGCRIYLCGFGGRKLDKLRKLINNGGGVRFNQLTGDVTHIIVGETDEELKQFLNK 414
Query: 447 LASLGIIQVVKSTWLEDCDRERREISILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQGK 506
+ VK WL D S + H L P+E + + +
Sbjct: 415 TQHRPYVLTVK--WLLD--------SFAKGH-----LQPEEIYFHSSYQQ---TEMPSPF 456
Query: 507 ESSVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNLLSAL 566
E ++ +L++++M ST PL+ N + ++ + + + +T + + S
Sbjct: 457 EPAI--NLTANKM-SSTRD----PLNHTRNHQADEDL-LSQYTENNSTLIEDEHPKTS-- 506
Query: 567 SDENKTQLRTKEDFRVQSLQN--MKLSTVFRGKIFRFSN----SFPEDRRAEIVQWVNQG 620
+ + +Q+ ED + Q+ ST+ G +F F E+ A I+ + +
Sbjct: 507 NTNSISQMSMHEDMTTCTSQSGLADTSTIIEGGLFSRKQFMVLGFLEEDEACIIDIIKKS 566
Query: 621 RGEVVNDDAKQNVHFTIECHGVIPKSADASETTY---VSSHWIRSCLEDGCLLDVGSHIL 677
G+V++ + I + V+P E+T V++ W+ C+E LLD S+ L
Sbjct: 567 AGKVLSSQKR-----AIADYAVVPLLGCEVESTVGEVVTNAWLGMCIEQEKLLDPHSNAL 621
Query: 678 YSPLHCQTPLPGFERFRFCV---SQYEEKDRVLLRNLCFVLGAKFMEKLTKKV------- 727
++P+ L G R CV SQ+ +R L L +LGAK E +K
Sbjct: 622 FTPVPF---LEGSTPLRECVLSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMF 678
Query: 728 --THLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGL 785
THL+ K A G KYEAA KW +P++T W+ +C R D + V D++
Sbjct: 679 ASTHLVLKDAEGSKYEAAKKWNLPAVTMNWLLQCARTGRKADEDSYLVDNVPEEDKDESF 738
Query: 786 CTVSQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEANQT--S 843
+ + P Q++++S P N L ++ + D+ R + +A Q+ S
Sbjct: 739 ISQTYKP-QAIRLSM-HAPCHLENHPEALTKAAVTPL-----DMNR---FKSKAFQSVIS 788
Query: 844 AHNKRARISEDEDH--DTLPGVHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVIE 898
HNK + S E P +HL P S + D + K + +V D A +E
Sbjct: 789 QHNKNPQTSGGESKVLQREPSLHLDTP--SKFLSKDKLFKPSFDV----KDALAALE 839
Score = 259 (96.2 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 87/363 (23%), Positives = 163/363 (44%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F L+ GC ++GPQ V+ C + R +P+ + +AM V + + D + + +
Sbjct: 68 FSHLKKLGCRIVGPQVVIFCMENQRRVPRAEYPVYNMAMADVTISCTSLDKETREDVHHY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNE--HRVVPQ 179
V MGG + + V+ +I V + KY A + L+KPI+ +W+ + W + R++
Sbjct: 128 VQIMGGCVYRDLNVSVTHLIAGEVGSKKYLVAAS-LEKPILLPSWVKELWEKSNQRIIRY 186
Query: 180 ESYKVL----P-FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT-KKCTHLICDISF 233
+ P F G ICVT + + +RKE+++L +GG+Y+ +L + THLI +
Sbjct: 187 SDVNMTEYLCPIFRGCTICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEA- 245
Query: 234 TIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSS----VS 289
+G K++ A++W ++H I+ +WF S+ + C +E Y ++ +S V
Sbjct: 246 -----------KGQKYECARKW-NVHCISVQWFFDSIEKGFCQDETMYKIEPASTIKSVP 293
Query: 290 SKKTVMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMY 349
T G +K +S+ + +S S+ + + + D + + + S+
Sbjct: 294 DTSTPTGGNSKPNSRTLYDVSQISNISTSCVNESAFNSAMASRLDPPADTLENLDISSL- 352
Query: 350 MDAPVVSKDGA-IEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRK 408
AP DG I R + N N L D ++VG E+++
Sbjct: 353 -QAPDDLLDGCRIYLCGFGGRKLDKLRKLINNGGGVRFNQL-TGDVTHIIVGETDEELKQ 410
Query: 409 LVN 411
+N
Sbjct: 411 FLN 413
Score = 60 (26.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 58/306 (18%), Positives = 116/306 (37%)
Query: 696 CVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAG-----GLKYEAAC-KWGIP 749
CVS+ K + L + LGA++ + VTH + + G +Y++ + GI
Sbjct: 903 CVSKKLIKKQGELNGIAASLGAEYRWCFDESVTHFI--YHGRQNDMSREYKSVKERSGIY 960
Query: 750 SITSEWIYECVRQNEVVS---LDH-FSPK-EVTTHDREAGLCTVSQFPMQ-SVQMSSADE 803
++ W++ C Q + V H ++PK + + G T S+F S+Q E
Sbjct: 961 IVSEHWLFACSEQQKRVPEALYPHTYNPKMSLDISAVQDGSYTASKFSADTSLQQDENSE 1020
Query: 804 PS-QFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEANQTSAHNKRARISEDEDHDTLPG 862
Q N G + + S +++ QT + + E
Sbjct: 1021 LQLQQNNKFGETSDDQVKKAAGDGNPQNPSKDVKGALTQTLEMRENFQRQLQEFMSATSV 1080
Query: 863 VHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVIEDLVEQTSKVQDLKSPERSECDKSL 922
V + ++ + + G + V+E L + + DL + E S+ ++ +
Sbjct: 1081 VKPRGSVGRAGFDNSPCTPEGARSTRNGR--SRVLEALRQSRQAMTDLNT-EPSQNEQII 1137
Query: 923 FPSDCSVLGQNHTDFNSVIGLSRQWSNRTLKKND-IQNPFNSKGVRSGIYEPFSETQTES 981
+ D + S + QW + + ++ +Q+ N G G Y P E+ T++
Sbjct: 1138 W--DDPTAREERAKLVSNL----QWPDSPSQYSEQLQHNMNDAG---GNYTPAKESLTDT 1188
Query: 982 QVVSYE 987
++ E
Sbjct: 1189 EIAELE 1194
Score = 45 (20.9 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 23/109 (21%), Positives = 43/109 (39%)
Query: 758 ECVRQNEVVSLD--HFSPKE-VTTHDREAGLCTVSQFPMQSVQMSSADEPSQFINPLGGL 814
E + E+ L+ F PK + T E L Q P + ++ + PL
Sbjct: 1183 ESLTDTEIAELEACEFEPKSAMRTPVIENNL----QSPTKPDHLTPTPQAPSIAFPLAN- 1237
Query: 815 QSSSPQTMVHKIDDITRSDNLRDEANQTSAHNKRARISEDEDHDTLPGV 863
+PQ + ++ + L++ Q S+ + + RI + + L GV
Sbjct: 1238 PPVAPQPREKPVQPFSKEETLKERRFQLSSLDPQERIDYSQLIEELGGV 1286
Score = 40 (19.1 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 645 KSADASETTY-VSSHWIRSCLE 665
KS Y VS HW+ +C E
Sbjct: 951 KSVKERSGIYIVSEHWLFACSE 972
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 599 FRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQ 631
F S +D +E+ N GE +D K+
Sbjct: 1007 FSADTSLQQDENSELQLQQNNKFGETSDDQVKK 1039
Score = 37 (18.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 691 ERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEK--LTKKVTHLL 731
ER RF +S + ++R+ L LG +EK TH++
Sbjct: 1260 ER-RFQLSSLDPQERIDYSQLIEELGGVVIEKQCFDPSCTHIV 1301
>UNIPROTKB|G3X684 [details] [associations]
symbol:TOPBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0016605
GO:GO:0006974 GO:GO:0010212 GO:GO:0001673 GO:GO:0000794
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00700000104481 InterPro:IPR016126 SUPFAM:SSF48201
InterPro:IPR026993 PANTHER:PTHR13561:SF6 OMA:CAQEYKH
EMBL:DAAA02003073 EMBL:DAAA02003074 Ensembl:ENSBTAT00000000686
Uniprot:G3X684
Length = 1524
Score = 289 (106.8 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 85/313 (27%), Positives = 147/313 (46%)
Query: 61 EKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIE 119
+ F+ L+ GC ++GPQ V+ C R +P+ + M V V + + D + ++
Sbjct: 66 DAFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDRREEVH 125
Query: 120 KLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWN---EHRV 176
K V MGG + + V+ +I V + KY A N LKKPI+ +W+ W E ++
Sbjct: 126 KYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAAN-LKKPILLPSWIKTLWEKSQEKKI 184
Query: 177 -----VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT-KKCTHLICD 230
+ E +K F G +ICVT + +RK +++L V++GG+Y +L +CTHLI
Sbjct: 185 ARYTDINMEDFKCPIFLGCIICVTGLCTLDRKSVQQLTVKHGGQYMGQLKMNECTHLI-- 242
Query: 231 ISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSS 290
+ P G K++ AKRW ++H + +WF S+ + C +E Y + S +
Sbjct: 243 -------VQEPKDIIGQKYECAKRW-NVHCVTTQWFFDSVEKGFCQDESIYKTEPRSEAK 294
Query: 291 KKTVMGSLTKQHSQVKVIGN-ALSAPSSMAT-ESNLLSVSCTGFADQDLEATFS--QSMP 346
M + Q+ I + LS S ++ ++ ++ S + LE T +++
Sbjct: 295 S---MPDTSTPTGQINTIDSRTLSDVSHISNINASCINESICNSVNSKLEPTIENLENLD 351
Query: 347 SMYMDAPVVSKDG 359
AP DG
Sbjct: 352 ISAFQAPEDLLDG 364
Score = 235 (87.8 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 129/549 (23%), Positives = 232/549 (42%)
Query: 388 DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSL 447
DL L CRI L GF ++ KL ++ GGG R+ N +TH++VG D E++
Sbjct: 360 DL-LDGCRIYLCGFNGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGD----DDDELKQF 414
Query: 448 --ASLGIIQVVKSTWLEDCDRERREISILQR-HVAYDLL-LPKESAWSTKGAPLCTNNLN 503
S VV + WL +C + + HV Y + +P +K A L N
Sbjct: 415 WDKSAHRPHVVGAKWLLECFSKGYMLPEEPYIHVNYQPVEIPVSDPPESKTALLKRKNNG 474
Query: 504 QGKESSV---RHSLSSDEMLRS--TNSGIGMPLSLEENREERAEIHMK-RESSLEATAVP 557
K V +H + +++L TN+ + ++ E H++ R S +
Sbjct: 475 FSKSDFVPEEKHEQADEDLLSQYQTNNPTVVEVAKSEVGLCSDSTHVEPRNDSTHISLQE 534
Query: 558 SQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVFRGKIFRFSNSFPEDRRAEIVQWV 617
Q ++ L D + T+E L + K S + G FSN + + I +
Sbjct: 535 HQSSISHCLPDVSTI---TEE-----GLFSQK-SFLVLG----FSN----ENESNIAIII 577
Query: 618 NQGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSHWIRSCLEDGCLLDVGSHIL 677
+ G++V+ ++ + + ++ A+ V++ W+ C++ L+D S+ L
Sbjct: 578 RENAGKIVSLQSRVVADYAVV--PLLGCEVQATVGEVVTNTWLVMCIDYQTLIDPKSNPL 635
Query: 678 YSPLHCQ---TPLPGFE-RFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKV-----T 728
++P+ TPL G F CV ++ L +L + F+ K K T
Sbjct: 636 FTPVPVMAGMTPLEGCVLSFSQCVGAEKDSLTFLANHLGASVQEYFVRKSNAKKGMFAST 695
Query: 729 HLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGLCTV 788
HL+ K GG KYEAA KW +P++T W+ E R + + +HF + + ++ T
Sbjct: 696 HLVLKEPGGSKYEAAKKWNLPAVTIAWLLESARLGKRANENHFLIENSSKEEQSLETETT 755
Query: 789 SQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEANQT--SAHN 846
++ + + D P +P+ L++ +T V +D + + +A +T S H+
Sbjct: 756 NEVNL------NPDTPE---HPVTHLETQR-KTAVTPLD----MNRFQSKAFRTVMSQHS 801
Query: 847 KRARISEDEDHDTL--PGVHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVIEDLVEQT 904
+A +S P +HL P S + D + K + +V D A +E +
Sbjct: 802 GQASVSPSPGQSLQKEPSLHLDTP--SKFLSKDKLFKPSFDV----KDALAALETPGGPS 855
Query: 905 SKVQDLKSP 913
+ + L +P
Sbjct: 856 QQKRKLSTP 864
Score = 111 (44.1 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 48/219 (21%), Positives = 96/219 (43%)
Query: 100 MDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIV-KNVLAAKYKWALNILK 158
+DG ++ GF+ + K+ +L+ + GGV + DV+ VIV + K W + +
Sbjct: 362 LDGCRIYLCGFNGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDDDDELKQFWDKSAHR 421
Query: 159 KPIVTVNWLYQCWNEHRVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSP 218
+V WL +C+++ ++P+E Y + + + I V+ P + +++ +N G
Sbjct: 422 PHVVGAKWLLECFSKGYMLPEEPYIHVNYQPVEIPVSDPPESKTALLKR---KNNGFSKS 478
Query: 219 ELTKKCTHLICDISF-TIYFLNFPYTPEGDKFKVAKRWGHIHIINRK------WFDQSMA 271
+ + H D + Y N P E K +V H+ R + +
Sbjct: 479 DFVPEEKHEQADEDLLSQYQTNNPTVVEVAKSEVGLCSDSTHVEPRNDSTHISLQEHQSS 538
Query: 272 RRACLNEESYTVQDSSVSSKKT--VMGSLTKQHSQVKVI 308
CL + S T+ + + S+K+ V+G + S + +I
Sbjct: 539 ISHCLPDVS-TITEEGLFSQKSFLVLGFSNENESNIAII 576
Score = 81 (33.6 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 45/205 (21%), Positives = 91/205 (44%)
Query: 382 SQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYV-SYNNGLTHIVVGTLSEAD 440
S+ ED L + +V V + S+ + +N + G+ Y S++ +TH +
Sbjct: 898 SEKEDAPKPLENV-VVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDT 956
Query: 441 KREVRSLASLGIIQVVKSTWLEDCDRERREI-SILQRHVAYDLLLPKESAWSTKGAPLCT 499
RE +S+ G+ +V WL +C +E + + L H Y+ + + + + + LC
Sbjct: 957 NREYKSVKERGV-HIVSEHWLLECAQEYKHLPESLYPHT-YNPKMSLDIS-AVQDGRLCN 1013
Query: 500 NNL-NQG-------------KESSVRHSLSSDEMLRSTNSGIGMPLS---LEENREERAE 542
N L + G +E+ + + +S++ L +T++G G S L + E R
Sbjct: 1014 NRLLSAGSAMRDDEPDHMPLEENDIDNMTTSNKEL-TTSNGNGRNDSKGALTQTLEMREN 1072
Query: 543 IHMKRESSLEATAVPSQQNLLSALS 567
+ + + AT++ Q ++LS
Sbjct: 1073 FQKQLQEIMSATSIVKPQGQRTSLS 1097
Score = 69 (29.3 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 19/80 (23%), Positives = 36/80 (45%)
Query: 686 PLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGG---LKYEA 742
P P E CVS+ K + L + LGA + + VTH + + +Y++
Sbjct: 904 PKP-LENVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKS 962
Query: 743 ACKWGIPSITSEWIYECVRQ 762
+ G+ ++ W+ EC ++
Sbjct: 963 VKERGVHIVSEHWLLECAQE 982
Score = 53 (23.7 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 388 DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVG 434
++ +SD + E ++ V+ GG Y N +TH++ G
Sbjct: 103 NMVMSDVTVSCTSLEKDRREEVHKYVQMMGGRVYRDLNVSVTHLIAG 149
Score = 40 (19.1 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 645 KSADASETTYVSSHWIRSCLED 666
KS VS HW+ C ++
Sbjct: 961 KSVKERGVHIVSEHWLLECAQE 982
Score = 37 (18.1 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 732 CKFAGGLKYEAACKWGIPSI 751
C+ AG E +WG SI
Sbjct: 1339 CRTAGRFMSEEDYEWGSSSI 1358
>MGI|MGI:1920018 [details] [associations]
symbol:Topbp1 "topoisomerase (DNA) II binding protein 1"
species:10090 "Mus musculus" [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=ISA] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] InterPro:IPR001357 MGI:MGI:1920018 Pfam:PF00533
GO:GO:0005737 GO:GO:0003677 GO:GO:0016605 GO:GO:0006281
GO:GO:0005815 GO:GO:0010212 GO:GO:0001673 GO:GO:0000794
GO:GO:0000922 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0007131 GeneTree:ENSGT00700000104481 eggNOG:NOG288412
CTD:11073 HOVERGEN:HBG067053 KO:K10728 InterPro:IPR026993
PANTHER:PTHR13561:SF6 OMA:CAQEYKH OrthoDB:EOG4FXR6Q EMBL:AK129104
EMBL:BC006707 EMBL:BC007170 EMBL:BC026608 EMBL:BC049797
EMBL:BC062111 EMBL:AK084654 EMBL:AK085031 IPI:IPI00453855
RefSeq:NP_795953.2 UniGene:Mm.259893 ProteinModelPortal:Q6ZQF0
SMR:Q6ZQF0 IntAct:Q6ZQF0 STRING:Q6ZQF0 PhosphoSite:Q6ZQF0
PaxDb:Q6ZQF0 PRIDE:Q6ZQF0 Ensembl:ENSMUST00000035164 GeneID:235559
KEGG:mmu:235559 UCSC:uc009rgl.1 InParanoid:Q6ZQF0 NextBio:382747
Bgee:Q6ZQF0 CleanEx:MM_TOPBP1 Genevestigator:Q6ZQF0
GermOnline:ENSMUSG00000032555 Uniprot:Q6ZQF0
Length = 1515
Score = 280 (103.6 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 71/239 (29%), Positives = 120/239 (50%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F+ L+ GC ++GPQ V C + + +P+ + M V V + D D++ ++ K
Sbjct: 68 FDHLKQLGCRIVGPQVVTFCMRHQQCVPRAEHPVYNMIMSDVTVSCTSLDKDKREEVHKY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWN---EHRV-- 176
V MGG + + V+ +I V + KY A N LKKPI+ +W+ W E ++
Sbjct: 128 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAAN-LKKPILLPSWIKTLWEKSQEKKITK 186
Query: 177 ---VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT-KKCTHLICDIS 232
V E +K F G +ICVT + RK +++L ++GG+Y +L +CTHLI
Sbjct: 187 YTDVNMEDFKCPIFLGCIICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQ-- 244
Query: 233 FTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSK 291
P+G K++ A+RW ++H + +WF S+ + C +E Y + + V +K
Sbjct: 245 ----------EPKGQKYECARRW-NVHCVTLQWFHDSIEKGFCQDESIYKAE-TRVEAK 291
Score = 230 (86.0 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 98/404 (24%), Positives = 174/404 (43%)
Query: 388 DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSL 447
DL L CRI L GF ++ KL ++ GGG R+ N +TH++VG + D R+ S
Sbjct: 356 DL-LDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDD-DVRQFWSK 413
Query: 448 ASLGIIQVVKSTWLEDCDRERREISILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQ-GK 506
+S VV + WL +C + Y +LP+ES T P +Q G
Sbjct: 414 SSHRP-HVVGAKWLLECFTK-----------GY--ILPEESYIHTNYQPAGIAVSDQPGN 459
Query: 507 ESSVRH---SLSSDEMLRSTN-SGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNL 562
+++V S S ++ + L + ++ + K +LE P +
Sbjct: 460 QTAVLDKSGSFSKSALVPAERLQQADEDLLAQYGNDDSTMVEAKLSEALEPEVGPCPGSA 519
Query: 563 LSALSDENKTQLRTKEDFRVQSLQNMKL--STVFRGKIFRFSN----SFPEDRRAEIVQW 616
D++ T + +E+ + S+ + L STV +F + F + + IV
Sbjct: 520 HREPCDDS-THISVQEENK-SSVSHCILDDSTVREEGLFSQKSFLVLGFSVENKCNIVDI 577
Query: 617 VNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSHWIRSCLEDGCLLDVGSHI 676
+ + G++V+ ++ + + ++ D + V++ W+ +C+++ L+D S+
Sbjct: 578 IREHAGKIVSLPSRIVADYAVV--PLLGCEVDVTVGEVVTNTWLVTCIDNQTLVDPKSNP 635
Query: 677 LYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKV--------- 727
L++P+ + + E SQ +R L L LGA E +K
Sbjct: 636 LFTPVSVMSGVTPLEDCVISFSQCVGAERDSLVFLANHLGASVQEFFVRKANAKKGMLAS 695
Query: 728 THLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHF 771
THL+ K G KYEAA KW +P++ W+ E R + +HF
Sbjct: 696 THLIVKEPTGSKYEAAKKWSLPAVNISWLLETARIGKRADENHF 739
Score = 112 (44.5 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 27/109 (24%), Positives = 55/109 (50%)
Query: 100 MDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLA-AKYKWALNILK 158
+DG ++ GF + K+ +L+ + GGV + DV+ VIV + + W+ + +
Sbjct: 358 LDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDDVRQFWSKSSHR 417
Query: 159 KPIVTVNWLYQCWNEHRVVPQESYKVLPFSGLMICVTRIPADERKEMEK 207
+V WL +C+ + ++P+ESY + I V+ P ++ ++K
Sbjct: 418 PHVVGAKWLLECFTKGYILPEESYIHTNYQPAGIAVSDQPGNQTAVLDK 466
Score = 82 (33.9 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 696 CVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGG---LKYEAACKWGIPSIT 752
CVS+ K + L + LGA++ + VTH + + +Y++A + G+ ++
Sbjct: 913 CVSKKLSKKQSELNGVAASLGAEYRWSFDETVTHFIYQGRANDSNREYKSAKERGVHIVS 972
Query: 753 SEWIYECVRQNEVV--SL-DH-FSPK---EVTTHDREAGLCTVSQFPMQSVQMSSADEP 804
W+ EC ++ + + SL H ++PK ++ T ++ LC S+ P+ +V S D P
Sbjct: 973 EHWLLECAQEYKHLPESLYPHTYNPKMSLDINTV-QDGRLCN-SRAPL-AVSASKDDGP 1028
Score = 75 (31.5 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 393 DCRIVLVGFEASEMRKLVNMVRRGGGSRYV-SYNNGLTHIVVGTLSEADKREVRSLASLG 451
D +V V + S+ + +N V G+ Y S++ +TH + + RE +S G
Sbjct: 908 DSVVVCVSKKLSKKQSELNGVAASLGAEYRWSFDETVTHFIYQGRANDSNREYKSAKERG 967
Query: 452 IIQVVKSTWLEDCDRERREI 471
+ +V WL +C +E + +
Sbjct: 968 V-HIVSEHWLLECAQEYKHL 986
Score = 44 (20.5 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 716 GAKFM----EKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSE 754
GAK + E L K THL C F LK + C+ I T++
Sbjct: 1415 GAKVLSGHPEPLLKDATHLFCDF-NKLKPDD-CRVFIAEATAQ 1455
Score = 44 (20.5 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 645 KSADASETTYVSSHWIRSCLED 666
KSA VS HW+ C ++
Sbjct: 961 KSAKERGVHIVSEHWLLECAQE 982
Score = 40 (19.1 bits), Expect = 2.7e-21, Sum P(3) = 2.7e-21
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 732 CKFAGGLKYEAACKWGIPSI 751
CK AG E +WG SI
Sbjct: 1333 CKTAGRFVQEEDYEWGSSSI 1352
>RGD|1562949 [details] [associations]
symbol:Topbp1 "topoisomerase (DNA) II binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0001673 "male germ cell nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] InterPro:IPR001357 Pfam:PF00533 RGD:1562949
GO:GO:0016605 GO:GO:0006974 GO:GO:0010212 GO:GO:0001673
GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00700000104481 InterPro:IPR026993
PANTHER:PTHR13561:SF6 OrthoDB:EOG4FXR6Q IPI:IPI00370853
ProteinModelPortal:D3ZRG0 Ensembl:ENSRNOT00000013265
UCSC:RGD:1562949 Uniprot:D3ZRG0
Length = 1516
Score = 280 (103.6 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 81/294 (27%), Positives = 140/294 (47%)
Query: 22 EIFDALLDALK-LNGAE-VELCCDPS--RTGPND--FHVISSSDHEKFEDLRAKGCNLLG 75
E F L+++K L E +++ D R ND ++ F+ L+ GC ++G
Sbjct: 21 ECFFKALESIKELQSEEYLQVITDEEALRIKENDKSLYICDRFSGTAFDHLKQLGCRIVG 80
Query: 76 PQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKAT 134
PQ V C + + +P+ + M + + + D D++ ++ K V MGG +
Sbjct: 81 PQVVTFCMRHQQCVPRAEHPVYNMIMSDITISCTSLDKDKREEVHKYVQMMGGRVYRDLN 140
Query: 135 LDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWN---EHRV-----VPQESYKVLP 186
+ V+ +I V + KY A N LKKPI+ W+ W E ++ V E +K
Sbjct: 141 VSVTHLIAGEVGSKKYLVAAN-LKKPILLPAWIKTLWEKSQEKKITKYTDVNMEDFKCPI 199
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT-KKCTHLICDISFTIYFLNFPYTPE 245
F G +ICVT + RK +++L ++GG+Y +L +CTHLI P+
Sbjct: 200 FLGCIICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQ------------EPK 247
Query: 246 GDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKTVMGSLT 299
G K++ A+RW ++H + +WF S+ + C +E Y + + + KTV + T
Sbjct: 248 GQKYECARRW-NVHCVTLQWFHDSIEKGFCQDESIYKAEPRA--AVKTVPDTST 298
Score = 223 (83.6 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 95/404 (23%), Positives = 171/404 (42%)
Query: 388 DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSL 447
DL L CRI L GF ++ KL ++ GGG R+ N +TH+++G E D R+ S
Sbjct: 356 DL-LDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIMGDY-EDDVRQFWSK 413
Query: 448 ASLGIIQVVKSTWLEDCDRERREISILQRHVAYDLLLPKESA----WSTKGAPLCTNNLN 503
+S VV + WL +C + Y +LP+ES + G P+ N
Sbjct: 414 SSHRP-HVVGAKWLLECFSK-----------GY--ILPEESYIHANYQPDGIPVSDQPRN 459
Query: 504 QGKESSVRHSLSSDEMLRSTN-SGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNL 562
Q + S + + + L + ++ + K ++E P +
Sbjct: 460 QTTVLEKSGTFSKKDFVPNEKFQQTDEDLLAQYVHDDSTIVEAKLSEAIEPEVGPCGGSA 519
Query: 563 LSALSDENKTQLRTKEDFRVQSLQNMKL--STVFRGKIFRFSN----SFPEDRRAEIVQW 616
D++ T + +E+ + S+ + L STV +F + F + IV
Sbjct: 520 HVEPCDDS-THISVQEENK-SSVSHCLLDGSTVPEEGLFSQKSFLVLGFSVENECNIVNI 577
Query: 617 VNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSHWIRSCLEDGCLLDVGSHI 676
+ + G++V+ ++ + + ++ +A+ V++ W+ +C+++ L+D S+
Sbjct: 578 IREHAGKIVSLPSRIVADYAVV--PLLGCEVEATVAEVVTNTWLVTCIDNQTLVDPKSNP 635
Query: 677 LYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKV--------- 727
L++P+ + + E SQ +R L L LGA E +K
Sbjct: 636 LFTPVSVMSGMTPLEDCVISFSQCVGAERDSLVFLANHLGASVQEFFVRKSNAKKGMLAS 695
Query: 728 THLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHF 771
THL+ K G KYEAA KW +P++ W+ E R + +HF
Sbjct: 696 THLIVKEPTGSKYEAAKKWSLPAVNISWLLETARMGKRADENHF 739
Score = 100 (40.3 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 55/253 (21%), Positives = 111/253 (43%)
Query: 684 QTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGG---LKY 740
+TP P ++ CVS+ K + L + LGA++ + VTH + + +Y
Sbjct: 902 ETPKP-LDKVVVCVSKRLSKKQSELNGVAASLGAEYRWSFDETVTHYIYQGRANDSNREY 960
Query: 741 EAACKWGIPSITSEWIYECVRQNEVV--SL-DH-FSPK---EVTTHDREAGLCTVSQFPM 793
++A + G+ ++ W+ EC ++ + + SL H ++PK +++T ++ LC S+ P
Sbjct: 961 KSAKERGVHVVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTV-QDGRLCD-SRLP- 1017
Query: 794 QSVQMSSADEPSQFINPLGGLQSSSPQTM-VHKIDDITRSDNLRDEANQ--TSAHNKRAR 850
++ S DEP ++ ++ +T+ H + + N RD+ T A R
Sbjct: 1018 SALSASKDDEPDHL-----SVEENATETLGTHSRESALLNGNGRDDCKGALTQALEMREN 1072
Query: 851 ISEDEDHDTLPGVHLKDPHRST-----NYNGDSMSKDNGEVPHIGSDVAAVIEDLVEQTS 905
+ ++ P + T + N S + D+ G + V+E L +
Sbjct: 1073 FQKQLQEIMSATSIVRTPAQKTCMSRSSCNSASSTPDSTRSARSGR--SRVLEALRQSRQ 1130
Query: 906 KVQDLKS-PERSE 917
V D+ + P ++E
Sbjct: 1131 IVPDINTEPSQNE 1143
Score = 79 (32.9 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 50/204 (24%), Positives = 83/204 (40%)
Query: 396 IVLVGFEASEMRKLVNMVRRGGGSRYV-SYNNGLTHIVVGTLSEADKREVRSLASLGIIQ 454
+V V S+ + +N V G+ Y S++ +TH + + RE +S G+
Sbjct: 911 VVCVSKRLSKKQSELNGVAASLGAEYRWSFDETVTHYIYQGRANDSNREYKSAKERGV-H 969
Query: 455 VVKSTWLEDCDRERREI-SILQRHVAYDLLLPKESA-WST-KGAPLCTNNLNQGKESSVR 511
VV WL +C +E + + L H Y+ PK S ST + LC + L +S
Sbjct: 970 VVSEHWLLECAQEYKHLPESLYPHT-YN---PKMSLDISTVQDGRLCDSRLPSALSAS-- 1023
Query: 512 HSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNLLSALSDENK 571
DE LS+EEN E H + + L + + AL+
Sbjct: 1024 ---KDDEPDH---------LSVEENATETLGTHSRESALLNGNG---RDDCKGALTQA-- 1066
Query: 572 TQLRTKEDFRVQSLQNMKLSTVFR 595
L +E+F+ Q + M +++ R
Sbjct: 1067 --LEMRENFQKQLQEIMSATSIVR 1088
Score = 44 (20.5 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 645 KSADASETTYVSSHWIRSCLED 666
KSA VS HW+ C ++
Sbjct: 961 KSAKERGVHVVSEHWLLECAQE 982
Score = 43 (20.2 bits), Expect = 5.2e-22, Sum P(3) = 5.2e-22
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 716 GAKFM----EKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSE 754
GAK + E L K THL C F LK + C+ I T++
Sbjct: 1416 GAKVLPGHPEPLFKDATHLFCDF-NKLKPDD-CRVFIAEATAQ 1456
Score = 40 (19.1 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 732 CKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGL 785
C+ AG E +WG SI + + + ++L ++ RE+G+
Sbjct: 1334 CRTAGRFVQEEDYEWGSSSILDA-LPDVTEHQQKLALAAMRWRKRIQQSRESGI 1386
>FB|FBgn0002878 [details] [associations]
symbol:mus101 "mutagen-sensitive 101" species:7227
"Drosophila melanogaster" [GO:0007067 "mitosis" evidence=TAS]
[GO:0048477 "oogenesis" evidence=TAS] [GO:0007095 "mitotic G2 DNA
damage checkpoint" evidence=IGI;IMP] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] InterPro:IPR001357
Pfam:PF00533 GO:GO:0007095 GO:GO:0007067 GO:GO:0048477
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0033314
FlyBase:FBgn0002878 EMBL:BT010007 ProteinModelPortal:Q7YU37
SMR:Q7YU37 STRING:Q7YU37 PRIDE:Q7YU37 InParanoid:Q7YU37
ArrayExpress:Q7YU37 Bgee:Q7YU37 Uniprot:Q7YU37
Length = 1425
Score = 393 (143.4 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 173/744 (23%), Positives = 314/744 (42%)
Query: 51 DFHVISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC-CLAMDGVKVIASG 109
D V++ + E FE L+ +LGP C+++C + N +P+ AM ++V A+G
Sbjct: 72 DVFVLTQFEGEFFEQLQQTRALILGPPCLITCLRRNEPIPEGSSAIYSTAMRDLQVSATG 131
Query: 110 FDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWA-LNILKKPIVTVNWLY 168
+K ++ +L+ MGG+ + +I + ++KY+ A LN + P++ V+W+
Sbjct: 132 ITPQKKEELSRLINWMGGIYFQSFGHRTTHLISNTIKSSKYEQATLNGV--PVMHVDWVQ 189
Query: 169 QCWNEHRVVPQES----------YKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSP 218
W++ R +E Y++ F G I + + + ++ +L+ NGG Y
Sbjct: 190 YVWDQSRRSQREGIMATDPDFDKYRLPIFFGANITCSGLDVARKDQVMRLVNDNGGIYHR 249
Query: 219 ELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNE 278
+ + DI T + +K+K A R+ ++ +W S R L
Sbjct: 250 AFRSQ----VVDIVITEQTKT-----DTEKYKAAIRYKK-DVLLPEWIFDSCNRGYALPT 299
Query: 279 ESYTVQDSSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMATESNLLS-VSCTGFADQDL 337
+ Y V+ SS T T+ G A A + ++ + +S VS + DL
Sbjct: 300 KDYEVRPGKTSSTPT---KTTRP-------GAAPGADQTHLSDLSRISFVSGSRRMCSDL 349
Query: 338 EATFSQSMPSMYMDAPVVSKDGAIEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIV 397
+T ++S+ S+ +P +K ++ T+ RN + Q++ +L C +
Sbjct: 350 -STVNESVSSVGSSSP--AKQ-LLKQATSSGRNYQQV-LAEIEPRQAKKAGAFLDGCCVY 404
Query: 398 LVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVK 457
L GF + E KL ++ GG +RY N G++HI+VG L +A+ R+ + +G + VV+
Sbjct: 405 LSGFRSEEREKLNRVLNTGGATRYDEANEGISHIIVGQLDDAEYRQWQRDGLMGSVHVVR 464
Query: 458 STWLEDCDRERREISILQRHVAYDLLL-PKESAWSTKGAPLCTNNLNQGKESSVRHSLSS 516
WL + R R +S L V+ P ++ ++K N+ + ++ L
Sbjct: 465 LDWLLESIRAGRVVSELVHRVSMPQNREPDVASPASKRTLRSMNHSFKQPTLPIKKKLFD 524
Query: 517 DEMLRSTNSGIGMP--LSLEENREER---AEIHMKRESSLEATAVPSQQNLLSALSDENK 571
E P L++ +++ A++ S L+ A +Q ++ +S N
Sbjct: 525 QEPDPVQEQEHEEPDHTLLDQYSQDQGAVAQLPPADVSLLQPAASSTQMDIRQRVSVANP 584
Query: 572 TQLRTKEDFRVQSLQNMKLST------VFRG-KIFRFSNSFPEDRRAEIVQWVNQGRGEV 624
E ++ L LS F G ++ F E+ +++ +G +
Sbjct: 585 KP--PAEGLQLPDLSASTLSIDFDKLDYFAGVSVYVHRECFNEEFFNQMLTECEAAQGLL 642
Query: 625 VNDDAKQNVHFTIECHGVI--PKSADASETTYVSSHWIRSCLEDGCLLDVGSHILYSPLH 682
V V F I V K V+ ++ SC++ LL + + + P
Sbjct: 643 VPSSFSDEVDFAIVSFEVAFDVKQLPVKARHVVTELFLESCMKKNQLLPIEYYHKHVPAT 702
Query: 683 C-QTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLL-CKFAGGLKY 740
+ PL G VS Y +R + +LGA + KK LL C A G KY
Sbjct: 703 ALRQPLKGMT---IVVSIYAGLERDFINATAELLGASVNKTFIKKEKPLLVCPSAEGSKY 759
Query: 741 EAACKWGIPSITSEWIYECVRQNE 764
E A KW P +TS+W+ +C R +
Sbjct: 760 EGAIKWNYPVVTSDWLVQCARTGQ 783
Score = 41 (19.5 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 862 GVHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVIEDLVEQT-------SKVQDLKSPE 914
G L + +ST N D +S + VP + DV V D+ + T S+ LK
Sbjct: 1092 GPTLSEEGQST-INFDKISFEESAVPVLAPDVPTVAPDVKQITDYLKNCESRGNSLKRSH 1150
Query: 915 RSECD 919
++ D
Sbjct: 1151 DNDMD 1155
>UNIPROTKB|E1BSJ5 [details] [associations]
symbol:TOPBP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] InterPro:IPR001357
Pfam:PF00533 GO:GO:0016605 GO:GO:0006974 GO:GO:0010212
GO:GO:0001673 GO:GO:0000794 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00700000104481 InterPro:IPR026993
PANTHER:PTHR13561:SF6 EMBL:AADN02001240 IPI:IPI00571512
ProteinModelPortal:E1BSJ5 Ensembl:ENSGALT00000019158 Uniprot:E1BSJ5
Length = 508
Score = 303 (111.7 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 83/278 (29%), Positives = 140/278 (50%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F L+ GC ++GPQ VL C + R +P+ + + M V + + D D + ++ K
Sbjct: 67 FNHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTISCTTLDKDVREEVHKY 126
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWN---EHRV-- 176
V MGG + + V+ +I V + KY A + LKKP++ +W+ W+ + R+
Sbjct: 127 VQMMGGRVYRDLNMSVTHLIAGEVGSKKYLVAAS-LKKPVLLPSWVKTLWDKSQQSRMMR 185
Query: 177 ---VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT-KKCTHLICDIS 232
V E Y F G ICVT + + +RKE+++L ++GG+YS +L +CTHLI
Sbjct: 186 YTDVNMEDYACPVFLGCTICVTGLSSSDRKEVQRLTAEHGGQYSGQLKMNECTHLIVQ-- 243
Query: 233 FTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKK 292
P+G K++ AK+W ++H + +WF S+ + C +E Y ++ S S
Sbjct: 244 ----------EPKGQKYECAKKW-NVHCVPVQWFSDSIEKGFCQDETMYKIESGSKLSS- 291
Query: 293 TVMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSCT 330
T S H+ K+ ++LS S ++ NL V+ T
Sbjct: 292 TPSTSTPTSHAS-KLDTHSLSDVSCISNV-NLSRVNET 327
Score = 98 (39.6 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 388 DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSL 447
DL L CR+ L GF ++ K+ ++ GGG R+ N +TH+++G S+ K +
Sbjct: 357 DL-LDGCRVYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGENSDELKHFLDK- 414
Query: 448 ASLGIIQVVKSTWL 461
+L +V + WL
Sbjct: 415 -TLHRPHIVTAKWL 427
Score = 44 (20.5 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 716 GAKFMEKLTKKVTH-LLCKFAGGLKYEAACKWGIPSI-TSEWIYECVRQNEVVSLDHFSP 773
G +F +L + VTH +L + + LK+ P I T++W+ E + + ++ + P
Sbjct: 386 GVRF-NQLNEDVTHVILGENSDELKHFLDKTLHRPHIVTAKWLLESFNKGYLCPVEQYIP 444
Query: 774 K 774
+
Sbjct: 445 Q 445
>MGI|MGI:95281 [details] [associations]
symbol:Ect2 "ect2 oncogene" species:10090 "Mus musculus"
[GO:0000902 "cell morphogenesis" evidence=IDA] [GO:0000910
"cytokinesis" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=ISO] [GO:0005096 "GTPase
activator activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0017048 "Rho GTPase binding" evidence=IPI]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030496 "midbody" evidence=ISO]
[GO:0032147 "activation of protein kinase activity" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISO] [GO:0032862
"activation of Rho GTPase activity" evidence=ISO] [GO:0032863
"activation of Rac GTPase activity" evidence=ISO] [GO:0033205 "cell
cycle cytokinesis" evidence=ISO] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0042307
"positive regulation of protein import into nucleus" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043089 "positive regulation of Cdc42 GTPase
activity" evidence=ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP]
[GO:0045859 "regulation of protein kinase activity" evidence=ISO]
[GO:0050790 "regulation of catalytic activity" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051988 "regulation of attachment
of spindle microtubules to kinetochore" evidence=ISO] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070830
"tight junction assembly" evidence=ISO] [GO:0071277 "cellular
response to calcium ion" evidence=ISO] [GO:0071479 "cellular
response to ionizing radiation" evidence=ISO] [GO:0071777 "positive
regulation of cell cycle cytokinesis" evidence=ISO] [GO:0072686
"mitotic spindle" evidence=ISO] [GO:0097149 "centralspindlin
complex" evidence=ISO] InterPro:IPR000219 InterPro:IPR001331
InterPro:IPR026817 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00325 InterPro:IPR001357 MGI:MGI:95281
Pfam:PF00533 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0070301 GO:GO:0005096 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0035556 GO:GO:0015031 GO:GO:0071277 GO:GO:0043123
GO:GO:0051260 GO:GO:0043065 GO:GO:0005923 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0004871 GO:GO:0000902
GO:GO:0045666 GO:GO:0032147 GO:GO:0030496 eggNOG:COG5422
GO:GO:0033205 GO:GO:0032154 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0051988 GO:GO:0070830 GO:GO:0043089
GO:GO:0071479 GO:GO:0032863 GO:GO:0071777 EMBL:CH466530
GO:GO:0042307 CTD:1894 HOGENOM:HOG000012876 HOVERGEN:HBG005563
OrthoDB:EOG4GHZNG GO:GO:0097149 PANTHER:PTHR16777:SF0 EMBL:L11316
EMBL:AK157718 EMBL:AK220452 EMBL:AC121099 EMBL:AC165280
EMBL:BC023881 EMBL:BC025565 EMBL:BC032155 EMBL:BC045614
IPI:IPI00114488 PIR:S32372 RefSeq:NP_001171096.1
RefSeq:NP_001171097.1 RefSeq:NP_031926.2 UniGene:Mm.261453 PDB:2COU
PDBsum:2COU ProteinModelPortal:Q07139 SMR:Q07139 IntAct:Q07139
STRING:Q07139 PhosphoSite:Q07139 PRIDE:Q07139
Ensembl:ENSMUST00000108298 Ensembl:ENSMUST00000108300
Ensembl:ENSMUST00000176242 GeneID:13605 KEGG:mmu:13605
GeneTree:ENSGT00700000104481 InParanoid:Q8R3E2 OMA:FERRSHT
EvolutionaryTrace:Q07139 NextBio:284242 Bgee:Q07139 CleanEx:MM_ECT2
Genevestigator:Q07139 GermOnline:ENSMUSG00000027699 Uniprot:Q07139
Length = 913
Score = 224 (83.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
V++ + F DL C ++GP +L+CA+ LP F+C C +M + + +G
Sbjct: 129 VVTDFQNSVFNDLYKADCRIVGPPVILNCAQRGEPLP---FSCRPLYCTSMLNLVLCFTG 185
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ K+ LV MGGV++ + V+ ++ K++ A++ L PI+ W+Y
Sbjct: 186 FRKKEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGEKFRVAVS-LGTPIMKPEWIY 244
Query: 169 QCW---NEH---RVVP--QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE V + +KV PF ++ +E+ ME++ GG Y P
Sbjct: 245 KAWERRNEQCFCAAVDDFRNEFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYLPVG 304
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRW 255
++CTHLI + + T+ L P+ P F V + W
Sbjct: 305 DERCTHLIVEEN-TVKDL--PFEPSKKLFVVKQEW 336
Score = 101 (40.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 680 PLHCQTPLPGFERFRFCVSQYEEKDRVL-LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGL 738
PL+C + L C + + +K+ ++ L L +G ++ KVTHL+ G
Sbjct: 170 PLYCTSML----NLVLCFTGFRKKEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGE 225
Query: 739 KYEAACKWGIPSITSEWIYEC-VRQNE 764
K+ A G P + EWIY+ R+NE
Sbjct: 226 KFRVAVSLGTPIMKPEWIYKAWERRNE 252
Score = 79 (32.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 38/138 (27%), Positives = 58/138 (42%)
Query: 266 FDQSMARRA----CLNEESYTVQDS-SVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMAT 320
FD +A + CL S ++ V ++ ++ KQ +K AL M
Sbjct: 22 FDSKVAEMSKENLCLASTSNVDEEMPQVEARVIMVQDAGKQEELLK----ALKTIKIMEV 77
Query: 321 ESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPVVSKDGAIEAPTAQTRNESNSDVCVAN 380
+ SC G +++ L +S+ +M M P V D E + + N + V
Sbjct: 78 PVIKIKESCPGKSEEKL----IKSIINMEMKVPCVKMDSMEEFESLDSPEFEN--IFVVT 131
Query: 381 DSQ-SEDNDLYLSDCRIV 397
D Q S NDLY +DCRIV
Sbjct: 132 DFQNSVFNDLYKADCRIV 149
>RGD|1308524 [details] [associations]
symbol:Ect2 "epithelial cell transforming sequence 2 oncogene"
species:10116 "Rattus norvegicus" [GO:0000902 "cell morphogenesis"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] InterPro:IPR000219
InterPro:IPR001331 InterPro:IPR026817 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50010 SMART:SM00325 InterPro:IPR001357 Pfam:PF00533
RGD:1308524 GO:GO:0005634 GO:GO:0005737 GO:GO:0005096 GO:GO:0043547
GO:GO:0035556 GO:GO:0000910 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0000902 GO:GO:0045666 GO:GO:0035023
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 PANTHER:PTHR16777:SF0
GeneTree:ENSGT00700000104481 IPI:IPI00951123
Ensembl:ENSRNOT00000067467 UCSC:RGD:1308524 ArrayExpress:D3ZXE7
Uniprot:D3ZXE7
Length = 692
Score = 222 (83.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 61/215 (28%), Positives = 102/215 (47%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
V++ F DL C ++GP +L+CA+ LP F+C C +M + + +G
Sbjct: 98 VVTDFQTSVFNDLYKADCRIVGPPVILNCAQMGEPLP---FSCRPLYCTSMLNLVLCFTG 154
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ K+ LV MGGV++ + V+ ++ K++ A++ L PI+ W+Y
Sbjct: 155 FRKKEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGEKFRVAVS-LGTPIMRPGWIY 213
Query: 169 QCW---NEHRVVPQES-----YKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE + +KV PF ++ +E+ ME++ GG Y P
Sbjct: 214 EAWERRNEQCFCAADDDFRNEFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGTYLPVG 273
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRW 255
++CTHLI D + T+ L P+ P F V + W
Sbjct: 274 DERCTHLIVDEN-TVKEL--PFEPSKKLFVVKQEW 305
>UNIPROTKB|E1BWT7 [details] [associations]
symbol:ECT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0017048 "Rho GTPase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0032147 "activation of protein kinase activity" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0032863 "activation
of Rac GTPase activity" evidence=IEA] [GO:0033205 "cell cycle
cytokinesis" evidence=IEA] [GO:0042307 "positive regulation of
protein import into nucleus" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0043089
"positive regulation of Cdc42 GTPase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0051988 "regulation of
attachment of spindle microtubules to kinetochore" evidence=IEA]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IEA]
[GO:0070830 "tight junction assembly" evidence=IEA] [GO:0071277
"cellular response to calcium ion" evidence=IEA] [GO:0071479
"cellular response to ionizing radiation" evidence=IEA] [GO:0071777
"positive regulation of cell cycle cytokinesis" evidence=IEA]
[GO:0097149 "centralspindlin complex" evidence=IEA]
InterPro:IPR000219 InterPro:IPR001331 InterPro:IPR026817
Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50010 SMART:SM00325
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0005737
GO:GO:0070301 GO:GO:0005096 GO:GO:0035556 GO:GO:0071277
GO:GO:0043123 GO:GO:0051260 GO:GO:0043065 GO:GO:0005923
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0004871
GO:GO:0000902 GO:GO:0045666 GO:GO:0032147 GO:GO:0030496
GO:GO:0033205 GO:GO:0032154 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0051988 GO:GO:0070830 GO:GO:0043089
GO:GO:0071479 GO:GO:0032863 GO:GO:0071777 GO:GO:0042307
GO:GO:0097149 PANTHER:PTHR16777:SF0 GeneTree:ENSGT00700000104481
OMA:FERRSHT EMBL:AADN02021008 EMBL:AADN02021007 IPI:IPI00579342
Ensembl:ENSGALT00000014916 Uniprot:E1BWT7
Length = 914
Score = 223 (83.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 71/268 (26%), Positives = 125/268 (46%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
V++ F +L C ++GP VL CA++ LP F+C C +M + + +G
Sbjct: 129 VVTDFQGSIFNNLCKADCRVIGPPVVLHCAQKGEPLP---FSCRPLYCASMLNLVLCFTG 185
Query: 110 F-DVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F DE K+ LV MGG+++ V+ ++ + K++ A++ L PI+ W+Y
Sbjct: 186 FRKKDELVKLVTLVHHMGGIIRKDFNSKVTHLVANSTHGDKFRIAVS-LGTPIMKAEWIY 244
Query: 169 QCWNEHRVVP--------QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W + + + +KV PF ++ +E+ ME++ GG Y P
Sbjct: 245 KAWEKRNEIDFCAADDDVRNQFKVPPFQDCLLSFLGFSDEEKANMEEMTEMQGGCYLPVG 304
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEES 280
++CTHL+ + S T+ P+ P K+ ++I+ ++WF S+ A E
Sbjct: 305 DERCTHLVVEES-TVK--EIPFEP-------LKK---LYIVKQEWFWGSIQMDARAGESM 351
Query: 281 YTVQDS-SVSSKKTVMG-SLTKQHSQVK 306
Y + S S KK+V SL+ +S K
Sbjct: 352 YLFEKSESPGLKKSVSQLSLSTPNSNRK 379
Score = 43 (20.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 772 SPKEVTTHDREAGLCTVSQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITR 831
S KEV TH E T +Q V P+ + SS +++V +++ +
Sbjct: 630 SLKEVMTHINEDKRKTEAQRQFFDVVYEVDGCPANLL--------SSHRSLVQRLETVAL 681
Query: 832 SDNLRDEANQTSAH--NKRARISEDEDHDTLPGVHLKDPHRST 872
D+L D Q + N I+ H + G K PH T
Sbjct: 682 GDDLCDRGEQVTLFLFNDCLEIARKR-HKVI-GA-FKSPHGHT 721
>UNIPROTKB|Q9H8V3 [details] [associations]
symbol:ECT2 "Protein ECT2" species:9606 "Homo sapiens"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000902 "cell morphogenesis"
evidence=IEA] [GO:0017048 "Rho GTPase binding" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0097149 "centralspindlin complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IDA] [GO:0071777 "positive regulation of cell cycle
cytokinesis" evidence=IDA;IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0005911 "cell-cell junction"
evidence=IDA] [GO:0045859 "regulation of protein kinase activity"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005923 "tight junction" evidence=IDA]
[GO:0070830 "tight junction assembly" evidence=IMP] [GO:0071277
"cellular response to calcium ion" evidence=IDA] [GO:0005096
"GTPase activator activity" evidence=IMP] [GO:0051988 "regulation
of attachment of spindle microtubules to kinetochore" evidence=IMP]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=IMP;IDA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IDA] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IDA] [GO:0032862 "activation of Rho
GTPase activity" evidence=IDA] [GO:0043089 "positive regulation of
Cdc42 GTPase activity" evidence=IDA] [GO:0032863 "activation of Rac
GTPase activity" evidence=IMP] [GO:0042307 "positive regulation of
protein import into nucleus" evidence=ISS] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISS] [GO:0033205
"cell cycle cytokinesis" evidence=IMP] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0051056 "regulation of small GTPase
mediated signal transduction" evidence=TAS] InterPro:IPR000219
InterPro:IPR001331 InterPro:IPR001849 InterPro:IPR026817
Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010
SMART:SM00233 SMART:SM00325 InterPro:IPR001357 Pfam:PF00533
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_111102 GO:GO:0006915
GO:GO:0048011 GO:GO:0007264 GO:GO:0042803 GO:GO:0070301
GO:GO:0005096 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0015031 GO:GO:0071277 GO:GO:0043123 GO:GO:0051260
GO:GO:0043065 GO:GO:0005923 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0004871 GO:GO:0000902 GO:GO:0045666
GO:GO:0032147 GO:GO:0030496 eggNOG:COG5422 GO:GO:0033205
GO:GO:0032154 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0051988 GO:GO:0070830 GO:GO:0043089 GO:GO:0071479
GO:GO:0032863 GO:GO:0071777 GO:GO:0042307 EMBL:AY376439
EMBL:DQ847274 EMBL:AK001323 EMBL:AK023267 EMBL:AK314581
EMBL:AC108667 EMBL:BC112086 EMBL:AL137710 IPI:IPI00748143
IPI:IPI00794284 RefSeq:NP_001245244.1 RefSeq:NP_001245245.1
RefSeq:NP_060568.3 UniGene:Hs.518299 PDB:3L46 PDBsum:3L46
ProteinModelPortal:Q9H8V3 SMR:Q9H8V3 DIP:DIP-47496N IntAct:Q9H8V3
MINT:MINT-6166617 STRING:Q9H8V3 PhosphoSite:Q9H8V3 DMDM:212276511
PaxDb:Q9H8V3 PRIDE:Q9H8V3 Ensembl:ENST00000232458
Ensembl:ENST00000392692 Ensembl:ENST00000417960
Ensembl:ENST00000441497 Ensembl:ENST00000540509 GeneID:1894
KEGG:hsa:1894 UCSC:uc003fii.2 CTD:1894 GeneCards:GC03P172468
HGNC:HGNC:3155 MIM:600586 neXtProt:NX_Q9H8V3 PharmGKB:PA27600
HOGENOM:HOG000012876 HOVERGEN:HBG005563 OrthoDB:EOG4GHZNG
ChiTaRS:ECT2 EvolutionaryTrace:Q9H8V3 GenomeRNAi:1894 NextBio:7725
ArrayExpress:Q9H8V3 Bgee:Q9H8V3 CleanEx:HS_ECT2
Genevestigator:Q9H8V3 GO:GO:0097149 PANTHER:PTHR16777:SF0
Uniprot:Q9H8V3
Length = 914
Score = 224 (83.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 70/268 (26%), Positives = 128/268 (47%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
V++ F DL C ++GP VL+C+++ LP F+C C +M + + +G
Sbjct: 129 VVTDFQDSVFNDLYKADCRVIGPPVVLNCSQKGEPLP---FSCRPLYCTSMMNLVLCFTG 185
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ ++ LV MGGV++ V+ ++ K++ A++ L PI+ W+Y
Sbjct: 186 FRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVS-LGTPIMKPEWIY 244
Query: 169 QCW---NE---HRVVP--QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE + V + +KV PF ++ +E+ ME++ GGKY P
Sbjct: 245 KAWERRNEQDFYAAVDDFRNEFKVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLG 304
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEES 280
++CTHL+ + + + P+ P +K+ ++++ ++WF S+ A E
Sbjct: 305 DERCTHLVVEENIV---KDLPFEP-------SKK---LYVVKQEWFWGSIQMDARAGETM 351
Query: 281 YTVQDSSVSS-KKTV-MGSLTKQHSQVK 306
Y + ++ KK+V M SL +S K
Sbjct: 352 YLYEKANTPELKKSVSMLSLNTPNSNRK 379
Score = 40 (19.1 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 506 KESSVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQN 561
K S HSLS +L +N+ P S N + + K SS +T VPS+Q+
Sbjct: 403 KRPSAEHSLSIGSLLDISNT----PES-SINYGDTPKSCTK--SSKSSTPVPSKQS 451
>UNIPROTKB|G5E9L8 [details] [associations]
symbol:ECT2 "Protein ECT2" species:9606 "Homo sapiens"
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000910
"cytokinesis" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
InterPro:IPR000219 InterPro:IPR001331 InterPro:IPR001849
InterPro:IPR026817 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50010
SMART:SM00233 SMART:SM00325 InterPro:IPR001357 Pfam:PF00533
GO:GO:0005634 GO:GO:0005737 GO:GO:0005096 GO:GO:0043547
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556
EMBL:CH471052 GO:GO:0000910 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0000902 GO:GO:0045666 GO:GO:0035023
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AC108667
UniGene:Hs.518299 HGNC:HGNC:3155 ChiTaRS:ECT2 PANTHER:PTHR16777:SF0
OMA:FERRSHT ProteinModelPortal:G5E9L8 SMR:G5E9L8 PRIDE:G5E9L8
Ensembl:ENST00000427830 ArrayExpress:G5E9L8 Bgee:G5E9L8
Uniprot:G5E9L8
Length = 927
Score = 224 (83.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 70/268 (26%), Positives = 128/268 (47%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
V++ F DL C ++GP VL+C+++ LP F+C C +M + + +G
Sbjct: 98 VVTDFQDSVFNDLYKADCRVIGPPVVLNCSQKGEPLP---FSCRPLYCTSMMNLVLCFTG 154
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ ++ LV MGGV++ V+ ++ K++ A++ L PI+ W+Y
Sbjct: 155 FRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVS-LGTPIMKPEWIY 213
Query: 169 QCW---NE---HRVVP--QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE + V + +KV PF ++ +E+ ME++ GGKY P
Sbjct: 214 KAWERRNEQDFYAAVDDFRNEFKVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLG 273
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEES 280
++CTHL+ + + + P+ P +K+ ++++ ++WF S+ A E
Sbjct: 274 DERCTHLVVEENIV---KDLPFEP-------SKK---LYVVKQEWFWGSIQMDARAGETM 320
Query: 281 YTVQDSSVSS-KKTV-MGSLTKQHSQVK 306
Y + ++ KK+V M SL +S K
Sbjct: 321 YLYEKANTPELKKSVSMLSLNTPNSNRK 348
Score = 40 (19.1 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 506 KESSVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQN 561
K S HSLS +L +N+ P S N + + K SS +T VPS+Q+
Sbjct: 372 KRPSAEHSLSIGSLLDISNT----PES-SINYGDTPKSCTK--SSKSSTPVPSKQS 420
>ASPGD|ASPL0000016982 [details] [associations]
symbol:AN10434 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0000018 "regulation of DNA
recombination" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533 EMBL:BN001302
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 OMA:DNTHLIT
ProteinModelPortal:C8V3U9 EnsemblFungi:CADANIAT00005074
Uniprot:C8V3U9
Length = 841
Score = 145 (56.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 46/176 (26%), Positives = 74/176 (42%)
Query: 589 KLSTVFRGKIFRFSNSFP--EDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKS 646
KLS VF GK+ S+ R I V + G+V D ++ G +
Sbjct: 240 KLS-VFHGKVIMLSSDLEIGSHLRDTISAIVEENGGKVTTDVSEATTFICRFRDGFNYRV 298
Query: 647 ADASETTYVSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRV 706
A + W+ + +L+ P+ +TP+PGFE+F+ +S Y + R
Sbjct: 299 ASRLNKDVGNLSWLYHLMTYDSWTSPYRRLLHYPIP-KTPIPGFEKFKISLSNYVGEARS 357
Query: 707 LLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQ 762
L +L GA+ + L ++ THL+ K AA +W I + W+ EC Q
Sbjct: 358 YLEHLITATGAECTKTLRQENTHLVTAHDNSEKCSAAREWNIHVVNHLWLEECYAQ 413
Score = 105 (42.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 160 PIVTVNWLYQCWNEHRVVPQESYKVLP---FSGLMICVTRIPADERKEMEKLIVQNGGKY 216
P++ W++ + R+ Y P + +++ IP ++ + ++ GG Y
Sbjct: 81 PVIKPQWMHASLAKRRLANVRQYSPDPRLFLNDVVVTCGDIPEGDKDAIIGGVLAKGGLY 140
Query: 217 SPELTKKCTHLICDISFTIYFLNFPYTPEGDKFK-VAKRWGHIHIINRKWFDQSMARRAC 275
+P LT CTHL+ D+ T + DK K V R ++ I+ WFD +
Sbjct: 141 NPRLTGMCTHLV-DL-----------TIDSDKAKQVRARNLNVKIVLPHWFDDCLKLGRR 188
Query: 276 LNEESYTVQDSSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMAT 320
++E Y + D + + + + +IG + PS + T
Sbjct: 189 IDERPYKLPDPEIL--RAAPDAPIRSAESRDIIGASTPEPSKLPT 231
Score = 80 (33.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 339 ATFSQSMPSMYMDAPV--VSKDGAIEAPTAQTRNESNSDVCVANDSQ-SEDNDLYLSDCR 395
A FS M S +D P +KD I Q + S + +AN Q S D L+L+D
Sbjct: 57 AAFSHIM-STTIDFPQFDAAKDALIPVIKPQWMHASLAKRRLANVRQYSPDPRLFLNDVV 115
Query: 396 IVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQV 455
+ + ++ V GG TH+V T+ ++VR+ +L + ++
Sbjct: 116 VTCGDIPEGDKDAIIGGVLAKGGLYNPRLTGMCTHLVDLTIDSDKAKQVRA-RNLNV-KI 173
Query: 456 VKSTWLEDCDRERREI 471
V W +DC + R I
Sbjct: 174 VLPHWFDDCLKLGRRI 189
Score = 67 (28.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 57/231 (24%), Positives = 98/231 (42%)
Query: 7 FKEAKVYM--SRNLVAPEIFDALLDALKLNGAEVELCCDPSRTGPN--DF-HVISSS-DH 60
F + KV + S++L +P+ L L+ +G E + +P P+ F H++S++ D
Sbjct: 12 FDQLKVCIVCSKDL-SPDAAHQLASTLETHGGE-PVVYEPPADFPDIAAFSHIMSTTIDF 69
Query: 61 EKFEDLRAKGCNLLGPQCV-LSCAKENRALPKQ-GFTCCLAMDGVKVIASGFDVDEKFKI 118
+F+ + ++ PQ + S AK A +Q L ++ V V +K I
Sbjct: 70 PQFDAAKDALIPVIKPQWMHASLAKRRLANVRQYSPDPRLFLNDVVVTCGDIPEGDKDAI 129
Query: 119 EKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKW--ALNILKKPIVTVNWLYQCWNEHRV 176
V A GG+ + T + ++ + + K K A N+ K IV +W C R
Sbjct: 130 IGGVLAKGGLYNPRLTGMCTHLVDLTIDSDKAKQVRARNLNVK-IVLPHWFDDCLKLGRR 188
Query: 177 VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHL 227
+ + YK LP ++ P E +I G +PE +K T L
Sbjct: 189 IDERPYK-LPDPEILRAAPDAPI-RSAESRDII----GASTPEPSKLPTPL 233
Score = 49 (22.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 31/168 (18%), Positives = 63/168 (37%)
Query: 191 MICVTRIPADERKEMEKLIVQNGGK---YSPELTKKCTHLICDISFTIYFLNFPYTPEGD 247
++C + D ++ + +GG+ Y P I T ++FP
Sbjct: 19 IVCSKDLSPDAAHQLASTLETHGGEPVVYEPPADFPDIAAFSHIMSTT--IDFP------ 70
Query: 248 KFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKTVMGSLTKQHSQVKV 307
+F AK I +I +W S+A+R N Y+ + V + + +
Sbjct: 71 QFDAAKD-ALIPVIKPQWMHASLAKRRLANVRQYSPDPRLFLNDVVVTCGDIPEGDKDAI 129
Query: 308 IGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPVV 355
IG L A + L+ CT D +++ ++ + + ++ +V
Sbjct: 130 IGGVL-AKGGLYNPR--LTGMCTHLVDLTIDSDKAKQVRARNLNVKIV 174
>WB|WBGene00009507 [details] [associations]
symbol:mus-101 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0045740 "positive regulation of
DNA replication" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] InterPro:IPR001357 Pfam:PF00533
GO:GO:0009792 GO:GO:0002009 GO:GO:0008284 GO:GO:0040011
GO:GO:0000003 GO:GO:0006974 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0045740 GeneTree:ENSGT00700000104481
KO:K10728 EMBL:Z75540 RefSeq:NP_492743.3 ProteinModelPortal:Q20129
SMR:Q20129 IntAct:Q20129 MINT:MINT-228329 STRING:Q20129
PaxDb:Q20129 EnsemblMetazoa:F37D6.1 GeneID:172929
KEGG:cel:CELE_F37D6.1 UCSC:F37D6.1 CTD:172929 WormBase:F37D6.1
eggNOG:NOG236804 HOGENOM:HOG000016652 InParanoid:Q20129 OMA:YHETTHL
NextBio:877573 Uniprot:Q20129
Length = 1182
Score = 143 (55.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 52/228 (22%), Positives = 99/228 (43%)
Query: 51 DFHVISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCCLAM-DGVKVIASG 109
DF V+ + F L+A+ + GP VL ++ + LP+ ++ VK+ +G
Sbjct: 83 DFFVLPCFRGKLFRKLQARKLKVYGPPIVLESIEDGKQLPQWNHPVYSSVFQDVKISFTG 142
Query: 110 FDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNV-LAAKYKWALNILKKPIVTVNWLY 168
++ +K ++ + + M GV+ + + ++ + KYK A+N K ++ + W+
Sbjct: 143 LNLTKKQELYEKIGWMCGVVGDALYHETTHLVTEKAEQTEKYKAAVNNSIK-LMRIGWID 201
Query: 169 QCWNEHRVV----------PQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSP 218
W + SY + F GL + +T I +R +LI +GGK
Sbjct: 202 DLWETSQTTMGRFSALSRDSVNSYALRVFEGLEMAITSIDGADRTNFIQLIEDHGGKVPG 261
Query: 219 ELTK-KCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKW 265
++K +C++LI D T G K+ A W + I+ +W
Sbjct: 262 TMSKTRCSYLISD-KIT-----------GVKYAKAVEWKSMQIVQSRW 297
Score = 93 (37.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 37/167 (22%), Positives = 71/167 (42%)
Query: 316 SSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPV--VSKDGAIEAPTAQTRNESN 373
SS + ++ + + F + D S S + P+ V I PT QT + N
Sbjct: 373 SSFISFASTSKIPSSTFTNNDSTLGRSGSGVRDGISTPIARVQTTPLIRYPTTQTASVQN 432
Query: 374 -SDVCVANDSQSEDN------DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNN 426
+DV + N DL+ +C + G + S M K + G +R + +
Sbjct: 433 IADVISDPIDELRKNIDDGLGDLF-ENCMFYICGVDESRMEKWRRFLNETGATRVAKFTS 491
Query: 427 GLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDCDRERREISI 473
T++VV + ++ ++ +R I +V W+ +C ++R+ IS+
Sbjct: 492 A-TNVVVVSPNQQERITIRKHLHQEDIAIVTVGWVVECVKQRKMISV 537
Score = 64 (27.6 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 748 IPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGLCTVSQFPMQSVQMSSADEPSQF 807
I +T W+ ECV+Q +++S++ + E T + ++ + Q + +S+ +
Sbjct: 517 IAIVTVGWVVECVKQRKMISVEGYQWTENTADESQSSQSQLQPVRPQPLPRTSSKSTIPY 576
Query: 808 INPLGGLQSSSPQ 820
G S+S Q
Sbjct: 577 -GKTSGPSSTSTQ 588
Score = 49 (22.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 375 DVCVANDSQS-ED-NDLYLSDCRIVLV--GFEASEMRKLVNMVRRGGGSRYVSYNNGLTH 430
D A+ +Q ED N Y + R +L + L + + GG+ +N +TH
Sbjct: 924 DESFADQNQEHEDLNRRYAMNPRFLLSVSNMDPQRAADLQETIMKLGGTIEREFNKDVTH 983
Query: 431 IVVGTLSEADK 441
++ + A K
Sbjct: 984 LIASNMQRAPK 994
Score = 46 (21.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 692 RFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLL 731
RF VS + + L+ LG + K VTHL+
Sbjct: 946 RFLLSVSNMDPQRAADLQETIMKLGGTIEREFNKDVTHLI 985
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 453 IQVVKSTWLEDC 464
+Q+V+S W+ C
Sbjct: 290 MQIVQSRWIRKC 301
>UNIPROTKB|F1MJ58 [details] [associations]
symbol:LOC100849441 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0097149 "centralspindlin complex" evidence=IEA]
[GO:0071777 "positive regulation of cell cycle cytokinesis"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:0071277 "cellular response to calcium ion"
evidence=IEA] [GO:0070830 "tight junction assembly" evidence=IEA]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IEA]
[GO:0051988 "regulation of attachment of spindle microtubules to
kinetochore" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043089 "positive regulation of Cdc42 GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0042307 "positive regulation of protein
import into nucleus" evidence=IEA] [GO:0033205 "cell cycle
cytokinesis" evidence=IEA] [GO:0032863 "activation of Rac GTPase
activity" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=IEA]
[GO:0032147 "activation of protein kinase activity" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0017048 "Rho GTPase
binding" evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR000219 InterPro:IPR001331 InterPro:IPR026817
Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50010 SMART:SM00325
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0005737
GO:GO:0070301 GO:GO:0005096 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0035556 GO:GO:0071277 GO:GO:0043123 GO:GO:0051260
GO:GO:0043065 GO:GO:0005923 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0004871 GO:GO:0000902 GO:GO:0045666
GO:GO:0032147 GO:GO:0030496 GO:GO:0033205 GO:GO:0032154
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051988
GO:GO:0070830 GO:GO:0043089 GO:GO:0071479 GO:GO:0032863
GO:GO:0071777 GO:GO:0042307 GO:GO:0097149 PANTHER:PTHR16777:SF0
GeneTree:ENSGT00700000104481 OMA:FERRSHT EMBL:DAAA02002175
IPI:IPI00710962 UniGene:Bt.28366 Ensembl:ENSBTAT00000032677
ArrayExpress:F1MJ58 Uniprot:F1MJ58
Length = 914
Score = 201 (75.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 69/272 (25%), Positives = 125/272 (45%)
Query: 50 NDFHVISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKV 105
N F V+ D F +L C ++GP VL+CA++ LP F+C C +M + +
Sbjct: 126 NVFIVMDFQD-SVFNELYKADCRVIGPPVVLNCAEKGEPLP---FSCRPLYCTSMMNLVL 181
Query: 106 IASGFDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTV 164
+GF E+ ++ LV MGGV++ V+ ++ K++ A++ L PI+
Sbjct: 182 CFTGFRKKEELARLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVS-LGTPIMKP 240
Query: 165 NWLYQCW---NEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKY 216
W+++ W NE + +KV PF ++ +E+ ME++ GG
Sbjct: 241 EWIHKAWERRNEQDFCASVDDFRNEFKVPPFQDCILSFLGFSDEEKTNMEEMTKMQGGNC 300
Query: 217 SPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACL 276
P ++CTHLI + + P+ P +K+ ++++ ++WF S+ A
Sbjct: 301 LPVGDERCTHLIVEENIV---KELPFEP-------SKK---LYVVKQEWFWGSIQMDARA 347
Query: 277 NEESYTVQDSSVSS-KKTV-MGSLTKQHSQVK 306
E Y + ++ KK+V + SL +S K
Sbjct: 348 GETMYLYEKANTPELKKSVSLLSLNTPNSNRK 379
Score = 43 (20.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 506 KESSVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQN 561
K S HSLS +L +N+ P S N E + K SS +T VPS+Q+
Sbjct: 403 KRPSAEHSLSIGSLLDISNT----PES-SINYGETPKSCTK--SSKNSTPVPSKQS 451
>UNIPROTKB|Q6ZW49 [details] [associations]
symbol:PAXIP1 "PAX-interacting protein 1" species:9606
"Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0043542 "endothelial cell migration"
evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0060717 "chorion development" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=IDA] [GO:0030330 "DNA damage response,
signal transduction by p53 class mediator" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000416 "positive
regulation of histone H3-K36 methylation" evidence=ISS] [GO:0031398
"positive regulation of protein ubiquitination" evidence=ISS]
[GO:0035066 "positive regulation of histone acetylation"
evidence=ISS] [GO:0045830 "positive regulation of isotype
switching" evidence=ISS] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=ISS] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=ISS;IMP] [GO:0035097 "histone methyltransferase
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001357 Pfam:PF00533 GO:GO:0006281 GO:GO:0060612
GO:GO:0006351 GO:GO:0010212 GO:GO:0006310 GO:GO:0035066
GO:GO:0001570 GO:GO:0031398 GO:GO:0016363 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330
eggNOG:NOG310206 GO:GO:0051571 GO:GO:0043542 GO:GO:0035097
GO:GO:0060261 PDB:3SQD PDBsum:3SQD KO:K14972 CTD:22976
HOVERGEN:HBG061191 EMBL:AK123044 EMBL:AK123600 EMBL:AK307417
EMBL:BX538201 EMBL:BX640616 EMBL:AC093726 EMBL:U80735 EMBL:BC008328
EMBL:BC033781 IPI:IPI00182798 IPI:IPI00479772 IPI:IPI00854696
IPI:IPI00894296 IPI:IPI00973545 RefSeq:NP_031375.3
UniGene:Hs.443881 ProteinModelPortal:Q6ZW49 SMR:Q6ZW49
DIP:DIP-41786N IntAct:Q6ZW49 MINT:MINT-276076 STRING:Q6ZW49
PhosphoSite:Q6ZW49 DMDM:74723057 PRIDE:Q6ZW49
Ensembl:ENST00000397192 Ensembl:ENST00000404141 GeneID:22976
KEGG:hsa:22976 UCSC:uc003wlr.1 UCSC:uc022aqf.1 UCSC:uc022aqh.1
GeneCards:GC07M154735 H-InvDB:HIX0007243 HGNC:HGNC:8624
HPA:HPA006694 MIM:608254 neXtProt:NX_Q6ZW49 PharmGKB:PA32964
OMA:DIQQINR ChiTaRS:PAXIP1 GenomeRNAi:22976 NextBio:43785
ArrayExpress:Q6ZW49 Bgee:Q6ZW49 CleanEx:HS_PAXIP1
Genevestigator:Q6ZW49 GO:GO:0060717 GO:GO:0000416 GO:GO:0045830
Uniprot:Q6ZW49
Length = 1069
Score = 145 (56.1 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 59/248 (23%), Positives = 99/248 (39%)
Query: 612 EIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCLEDGC 668
+++Q + G+ + V+ +A + H E G P+ +A E V W+ ++ G
Sbjct: 27 QVIQLLKAGKAKEVSYNALAS-HIISE-DGDNPEVGEAREVFDLPVVKPSWVILSVQCGT 84
Query: 669 LLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVT 728
LL V +SP CQ F C+SQ +DR L L G L KK T
Sbjct: 85 LLPVNG---FSPESCQI----FFGITACLSQVSSEDRSALWALVTFYGGDCQLTLNKKCT 137
Query: 729 HLLCKFAGGLKYEAACKWG-IPSITSEWIYECVRQNEVVSLDHFSPKEVT---THDREAG 784
HL+ G KYE A K I +T +W+ +CV + + P+ + + E
Sbjct: 138 HLIVPEPKGEKYECALKRASIKIVTPDWVLDCVSEKTKKDEAFYHPRLIIYEEEEEEEEE 197
Query: 785 LCTVSQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEANQTSA 844
V S S DE S + G S Q + ++ + + D+++ +S
Sbjct: 198 EEEVENEEQDSQNEGSTDEKSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSSP 257
Query: 845 HNKRARIS 852
+ ++
Sbjct: 258 EKQERNLN 265
Score = 128 (50.1 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 47/190 (24%), Positives = 86/190 (45%)
Query: 655 VSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCF 713
V++HW+ + L+ + V H L+ P+ + V+ + + DR L+ + +
Sbjct: 672 VTAHWLNTVLKKKKM--VPPHRALHFPVAFPPGGKPCSQHIISVTGFVDSDRDDLKLMAY 729
Query: 714 VLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI-------YECVRQNEVV 766
+ GAK+ L + T L+CK GLKYE A +W IP + ++W+ +E +RQ +
Sbjct: 730 LAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEWRIPCVNAQWLGDILLGNFEALRQIQYS 789
Query: 767 SLDHFSPKE--VTTHDREAGLCTVSQFPMQ-SVQ--MSSADEPSQFINPLGGLQSSSPQT 821
FS ++ T L + P++ S + MS P N + +Q SS +
Sbjct: 790 RYTAFSLQDPFAPTQHLVLNLLDAWRVPLKVSAELLMSIRLPPKLKQNEVANVQPSSKRA 849
Query: 822 MVHKIDDITR 831
+ + T+
Sbjct: 850 RIEDVPPPTK 859
Score = 102 (41.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 45/184 (24%), Positives = 81/184 (44%)
Query: 103 VKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIV 162
VK A G D+D + + +L+ A G + S +I ++ + A + P+V
Sbjct: 16 VKYYAVG-DIDPQ--VIQLLKA-GKAKEVSYNALASHIISEDGDNPEVGEAREVFDLPVV 71
Query: 163 TVNWLY---QCWNEHRV--VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYS 217
+W+ QC V ES ++ F G+ C++++ +++R + L+ GG
Sbjct: 72 KPSWVILSVQCGTLLPVNGFSPESCQI--FFGITACLSQVSSEDRSALWALVTFYGGDCQ 129
Query: 218 PELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLN 277
L KKCTHLI P P+G+K++ A + I I+ W ++ + +
Sbjct: 130 LTLNKKCTHLIV-----------P-EPKGEKYECALKRASIKIVTPDWVLDCVSEKTKKD 177
Query: 278 EESY 281
E Y
Sbjct: 178 EAFY 181
Score = 91 (37.1 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 32/125 (25%), Positives = 52/125 (41%)
Query: 53 HVISSS-DHEKFEDLRAK-GCNLLGPQCVLSCAKENRALPKQGFT--CCLAMDGVKVIAS 108
H+IS D+ + + R ++ P V+ + LP GF+ C G+ S
Sbjct: 48 HIISEDGDNPEVGEAREVFDLPVVKPSWVILSVQCGTLLPVNGFSPESCQIFFGITACLS 107
Query: 109 GFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
+++ + LVT GG Q + +IV KY+ AL IVT +W+
Sbjct: 108 QVSSEDRSALWALVTFYGGDCQLTLNKKCTHLIVPEPKGEKYECALKRASIKIVTPDWVL 167
Query: 169 QCWNE 173
C +E
Sbjct: 168 DCVSE 172
Score = 76 (31.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 173 EHRVVPQESYKVLPFSGLMI-CVTRIPADERKEME--------KLIVQ-NGGKYSPELTK 222
+H++ + +P G ++ CV I AD ++M K I+Q +GG P T
Sbjct: 588 QHQLFGHDPAVEIPEEGFLLGCVFAI-ADYPEQMSDKQLLATWKRIIQAHGGTVDPTFTS 646
Query: 223 KCTHLICD 230
+CTHL+C+
Sbjct: 647 RCTHLLCE 654
Score = 68 (29.0 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 20/87 (22%), Positives = 44/87 (50%)
Query: 396 IVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQ- 454
++ GFE ++++ + + GG S TH++ ++ R V+ L ++ +++
Sbjct: 869 VLFTGFEPVQVQQYIKKLYILGGEVAESAQK-CTHLIASKVT----RTVKFLTAISVVKH 923
Query: 455 VVKSTWLEDCDRERREISILQRHVAYD 481
+V WLE+C R ++ I Q ++ D
Sbjct: 924 IVTPEWLEECFRCQKFIDE-QNYILRD 949
Score = 64 (27.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 713 FVLGAKFMEKLTKKVTHLLC-KFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHF 771
++LG + E +K THL+ K +K+ A +T EW+ EC R + + ++
Sbjct: 887 YILGGEVAES-AQKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRCQKFIDEQNY 945
Score = 54 (24.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 415 RGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWL 461
+ G ++ VSYN +HI+ + D EV + + VVK +W+
Sbjct: 33 KAGKAKEVSYNALASHIIS---EDGDNPEVGEAREVFDLPVVKPSWV 76
Score = 52 (23.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 403 ASEMRK-LVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWL 461
+SE R L +V GG ++ N TH++V + +K E +L I ++V W+
Sbjct: 110 SSEDRSALWALVTFYGGDCQLTLNKKCTHLIVPE-PKGEKYEC-ALKRASI-KIVTPDWV 166
Query: 462 EDCDRER 468
DC E+
Sbjct: 167 LDCVSEK 173
>CGD|CAL0004594 [details] [associations]
symbol:ESC4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035361 "Cul8-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0000018 "regulation of DNA
recombination" evidence=IEA] [GO:0010526 "negative regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR001357 CGD:CAL0004594 Pfam:PF00533
GO:GO:0071216 GO:GO:0036180 GO:GO:0009267 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0036170 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 eggNOG:NOG248673 RefSeq:XP_722356.1
RefSeq:XP_722495.1 ProteinModelPortal:Q5ALY1 GeneID:3635727
GeneID:3635868 KEGG:cal:CaO19.1445 KEGG:cal:CaO19.9020
Uniprot:Q5ALY1
Length = 903
Score = 132 (51.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 594 FRGKIFRFSNSFP-EDRRAEIVQWVNQGRG-EVVN--DDAKQNVHFTIECHGVIPKSADA 649
F+ K F ++ F R + +++V + G ++ D ++ +++ G K + A
Sbjct: 241 FKNKKFYINSDFNLSQRSSNAIKFVIERHGGSIIKKFDVSEIDIYLGKYRQGDTYKKSCA 300
Query: 650 SETTYVSS-HWIRSCLED-GCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVL 707
S V + W+ L L + S+ILY P TPL G + + ++ Y + R
Sbjct: 301 SNRIIVGNLQWLYFILASKSWTLPLNSNILYYP-QPSTPLDGLQGLKISITNYSGEARSY 359
Query: 708 LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAAC-KW----G---IPSITSEWIYEC 759
L L ++G F + LT+ +L+C A G K++AA KW G I + W+ +C
Sbjct: 360 LSKLITIMGGVFTKTLTRDNDYLVCGKAEGKKFDAALNKWVDSEGNSEIKVVNHLWLEDC 419
Query: 760 -VRQNEV-VSLDHF 771
V+ ++V SLD +
Sbjct: 420 YVQWHKVDSSLDKY 433
Score = 110 (43.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 38/167 (22%), Positives = 70/167 (41%)
Query: 160 PIVTVNWLYQCWNEHRVVPQESYKVLP---FSGLMICVT-RIPADERKEMEKLIVQNGGK 215
PIVT +W+Y + ++ +Y P F IC +P +++ + GG
Sbjct: 73 PIVTPSWVYDSISSQKMQNIRTYNPDPAYFFKDCFICCADNLPPGDKELIYAAAQAFGGG 132
Query: 216 YSPELTKKCTHLIC-DISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRA 274
Y +TK THLI DIS L + D +I I+ W D +
Sbjct: 133 YLDNITKYTTHLIAMDISNEKSILASSIIHDDDDNDSNGDMPNIKIVLPHWIDHCITMGK 192
Query: 275 CLNEESYTVQDSSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMATE 321
LNE++Y + D+ + ++ + K +++ ++L + + +E
Sbjct: 193 KLNEDNYLLPDAKILHDES--NDVLKNEILPEILNDSLPPQNELDSE 237
>UNIPROTKB|Q5ALY1 [details] [associations]
symbol:ESC4 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR001357 CGD:CAL0004594 Pfam:PF00533 GO:GO:0071216
GO:GO:0036180 GO:GO:0009267 EMBL:AACQ01000008 EMBL:AACQ01000007
GO:GO:0036170 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
eggNOG:NOG248673 RefSeq:XP_722356.1 RefSeq:XP_722495.1
ProteinModelPortal:Q5ALY1 GeneID:3635727 GeneID:3635868
KEGG:cal:CaO19.1445 KEGG:cal:CaO19.9020 Uniprot:Q5ALY1
Length = 903
Score = 132 (51.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 594 FRGKIFRFSNSFP-EDRRAEIVQWVNQGRG-EVVN--DDAKQNVHFTIECHGVIPKSADA 649
F+ K F ++ F R + +++V + G ++ D ++ +++ G K + A
Sbjct: 241 FKNKKFYINSDFNLSQRSSNAIKFVIERHGGSIIKKFDVSEIDIYLGKYRQGDTYKKSCA 300
Query: 650 SETTYVSS-HWIRSCLED-GCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVL 707
S V + W+ L L + S+ILY P TPL G + + ++ Y + R
Sbjct: 301 SNRIIVGNLQWLYFILASKSWTLPLNSNILYYP-QPSTPLDGLQGLKISITNYSGEARSY 359
Query: 708 LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAAC-KW----G---IPSITSEWIYEC 759
L L ++G F + LT+ +L+C A G K++AA KW G I + W+ +C
Sbjct: 360 LSKLITIMGGVFTKTLTRDNDYLVCGKAEGKKFDAALNKWVDSEGNSEIKVVNHLWLEDC 419
Query: 760 -VRQNEV-VSLDHF 771
V+ ++V SLD +
Sbjct: 420 YVQWHKVDSSLDKY 433
Score = 110 (43.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 38/167 (22%), Positives = 70/167 (41%)
Query: 160 PIVTVNWLYQCWNEHRVVPQESYKVLP---FSGLMICVT-RIPADERKEMEKLIVQNGGK 215
PIVT +W+Y + ++ +Y P F IC +P +++ + GG
Sbjct: 73 PIVTPSWVYDSISSQKMQNIRTYNPDPAYFFKDCFICCADNLPPGDKELIYAAAQAFGGG 132
Query: 216 YSPELTKKCTHLIC-DISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRA 274
Y +TK THLI DIS L + D +I I+ W D +
Sbjct: 133 YLDNITKYTTHLIAMDISNEKSILASSIIHDDDDNDSNGDMPNIKIVLPHWIDHCITMGK 192
Query: 275 CLNEESYTVQDSSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMATE 321
LNE++Y + D+ + ++ + K +++ ++L + + +E
Sbjct: 193 KLNEDNYLLPDAKILHDES--NDVLKNEILPEILNDSLPPQNELDSE 237
>ASPGD|ASPL0000001078 [details] [associations]
symbol:AN6896 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0033314 "mitotic
DNA replication checkpoint" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0071163 "DNA replication
preinitiation complex assembly" evidence=IEA] InterPro:IPR001357
EMBL:BN001301 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
EMBL:AACD01000113 KO:K03507 OrthoDB:EOG4N33X8 eggNOG:NOG288412
OMA:LLITESH RefSeq:XP_664500.1 ProteinModelPortal:Q5AXT4
EnsemblFungi:CADANIAT00007698 GeneID:2870612 KEGG:ani:AN6896.2
HOGENOM:HOG000177186 Uniprot:Q5AXT4
Length = 796
Score = 144 (55.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 596 GKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNV-HFTI-ECHGVIPK--SADASE 651
G + F++ PE +R E+ +Q G N D +V H + E K + + S+
Sbjct: 24 GAVLCFTSIVPE-QRTELASIASQ-MGASHNYDLTSDVTHLIVGEISTEKYKFVARERSD 81
Query: 652 TTYVSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVL---- 707
+ WI + + G L Q LP F C++ +E+ V+
Sbjct: 82 IVVLRPEWIEAVRQSWMQ---GGDTDIRALEEQYRLPTFSGTAICITGFEDTSFVVNLRN 138
Query: 708 -LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVV 766
+RN + GA F + LTK+VTHL+ + AGG KY+ A +W + +T +W + + + ++
Sbjct: 139 YIRNKAQLNGADFRKDLTKQVTHLIARTAGGEKYKYATQWNVKVVTLKWFTDSMERGMIL 198
Query: 767 SLDHFSP 773
+ P
Sbjct: 199 EETLYHP 205
Score = 143 (55.4 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 49/184 (26%), Positives = 81/184 (44%)
Query: 113 DEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVN--WLY-- 168
+++ ++ + + MG T DV+ +IV + KYK+ + IV + W+
Sbjct: 35 EQRTELASIASQMGASHNYDLTSDVTHLIVGEISTEKYKFVARE-RSDIVVLRPEWIEAV 93
Query: 169 -QCW-----NEHRVVPQESYKVLPFSGLMICVTRIP-----ADERKEMEKLIVQNGGKYS 217
Q W + R + +E Y++ FSG IC+T + R + NG +
Sbjct: 94 RQSWMQGGDTDIRAL-EEQYRLPTFSGTAICITGFEDTSFVVNLRNYIRNKAQLNGADFR 152
Query: 218 PELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLN 277
+LTK+ THLI T G+K+K A +W ++ ++ KWF SM R L
Sbjct: 153 KDLTKQVTHLIAR------------TAGGEKYKYATQW-NVKVVTLKWFTDSMERGMILE 199
Query: 278 EESY 281
E Y
Sbjct: 200 ETLY 203
Score = 104 (41.7 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 689 GFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEA---ACK 745
G C + + D + L L ++GA + E L + L+C + L E +
Sbjct: 416 GLSGMNICSTGFSRIDLLHLSKLVNLVGATYNEYLKPTASVLICNTSISLNQEKLRHTNE 475
Query: 746 WGIPSITSEWIYECVRQNEVVSLDHFSPKEVTT 778
WG+P++T+EW++ +RQ L+ + ++ +T
Sbjct: 476 WGVPAVTAEWLWTSIRQERKQPLEPYLVRKPST 508
Score = 90 (36.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 28/100 (28%), Positives = 42/100 (42%)
Query: 183 KVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLIC-DISFTIYFLNFP 241
K P +G ++C T I ++R E+ + Q G ++ +LT THLI +IS Y F
Sbjct: 18 KERPLAGAVLCFTSIVPEQRTELASIASQMGASHNYDLTSDVTHLIVGEISTEKY--KFV 75
Query: 242 YTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
D + W I + + W L EE Y
Sbjct: 76 ARERSDIVVLRPEW--IEAVRQSWMQGGDTDIRAL-EEQY 112
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 689 GF-ERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKW- 746
GF +R F + + K +LRN GA+ ++ L++ + K GL K
Sbjct: 324 GFLDRCFFLIHGFTSKQTNVLRNHLSFNGAQLVDSLSEFSRPDIPKKGHGLYIIVPYKTP 383
Query: 747 --GIPSITSEWIYEC 759
+PS T + +EC
Sbjct: 384 RSNVPS-TDDLAFEC 397
Score = 37 (18.1 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 827 DDITRSDNLRDEANQTSAHNKRARISEDEDHDTL--PGVHLKDPHRSTN 873
DD ++ ++ A A + I E P + LK PH S +
Sbjct: 533 DDYLVTNGVKSPATGRVAKEMKQTILESPQRKLSGEPNLGLKPPHNSVS 581
>MGI|MGI:1890430 [details] [associations]
symbol:Paxip1 "PAX interacting (with
transcription-activation domain) protein 1" species:10090 "Mus
musculus" [GO:0000416 "positive regulation of histone H3-K36
methylation" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=ISO] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IMP] [GO:0035066
"positive regulation of histone acetylation" evidence=IMP]
[GO:0035097 "histone methyltransferase complex" evidence=ISO;IDA]
[GO:0043542 "endothelial cell migration" evidence=IMP] [GO:0045830
"positive regulation of isotype switching" evidence=IMP]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IMP]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0060612 "adipose
tissue development" evidence=IMP] [GO:0060717 "chorion development"
evidence=IMP] InterPro:IPR001357 MGI:MGI:1890430 Pfam:PF00533
GO:GO:0006281 GO:GO:0060612 GO:GO:0006351 GO:GO:0006974
GO:GO:0010212 GO:GO:0006310 GO:GO:0035066 GO:GO:0001570
GO:GO:0031398 GO:GO:0016363 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330 eggNOG:NOG310206
GO:GO:0051571 GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 KO:K14972
CTD:22976 HOGENOM:HOG000115463 HOVERGEN:HBG061191 OrthoDB:EOG4CRKZF
OMA:DIQQINR ChiTaRS:PAXIP1 GO:GO:0060717 GO:GO:0000416
GO:GO:0045830 EMBL:AF104261 EMBL:AK144606 EMBL:BC066014
IPI:IPI00421197 RefSeq:NP_061366.2 UniGene:Mm.277190
UniGene:Mm.409895 HSSP:Q14676 ProteinModelPortal:Q6NZQ4 SMR:Q6NZQ4
IntAct:Q6NZQ4 STRING:Q6NZQ4 PhosphoSite:Q6NZQ4 PaxDb:Q6NZQ4
PRIDE:Q6NZQ4 Ensembl:ENSMUST00000002291 GeneID:55982 KEGG:mmu:55982
UCSC:uc008wtr.1 GeneTree:ENSGT00600000084454 InParanoid:Q6NZQ4
NextBio:311686 Bgee:Q6NZQ4 Genevestigator:Q6NZQ4 Uniprot:Q6NZQ4
Length = 1056
Score = 144 (55.7 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 48/175 (27%), Positives = 75/175 (42%)
Query: 612 EIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCLEDGC 668
+++Q + G+ + V+ +A + H E G P+ +A E V W+ ++ G
Sbjct: 27 QVIQLLKAGKAKEVSYNALAS-HIISE-DGDNPEVGEAREVFDLPVVKPSWVTLSVQCGA 84
Query: 669 LLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVT 728
LL V +SP CQ F C+SQ +DR L L G L KK T
Sbjct: 85 LLPVNG---FSPESCQI----FFGLTACLSQVSSEDRSALWALVTFHGGSCQLNLNKKCT 137
Query: 729 HLLCKFAGGLKYEAACK-WGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDRE 782
HL+ G KYE A K I +T +W+ +CV + + P+ + + E
Sbjct: 138 HLIVPEPKGEKYERAVKRTSIKIVTPDWVLDCVSEKRRKDEAFYHPRLIIYEEEE 192
Score = 130 (50.8 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 45/189 (23%), Positives = 84/189 (44%)
Query: 655 VSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFV 714
V++HW+ + L+ L+ L+ P+ + V+ + + DR L+ + ++
Sbjct: 659 VTAHWLNTVLKKKKLMPP-HRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYL 717
Query: 715 LGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI-------YECVRQNEVVS 767
GAK+ L + T L+CK GLKYE A +W IP + ++W+ +E +RQ +
Sbjct: 718 AGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNAQWLGDILLGNFEALRQVQYSR 777
Query: 768 LDHFSPKE--VTTHDREAGLCTVSQFPMQ---SVQMSSADEPSQFINPLGGLQSSSPQTM 822
F+ + V T GL + P++ + M P N + +Q SS +
Sbjct: 778 YTAFNMPDPFVPTPHLVLGLLDAWRTPVKVTAELLMGVRLPPKLKPNEVANIQPSSKRAR 837
Query: 823 VHKIDDITR 831
+ + T+
Sbjct: 838 IEDLPPPTK 846
Score = 102 (41.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 103 VKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIV 162
VK A G D+D + + +L+ A G + S +I ++ + A + P+V
Sbjct: 16 VKYYAVG-DIDPQ--VIQLLKA-GKAKEVSYNALASHIISEDGDNPEVGEAREVFDLPVV 71
Query: 163 TVNWL---YQCWNEHRV--VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYS 217
+W+ QC V ES ++ F GL C++++ +++R + L+ +GG
Sbjct: 72 KPSWVTLSVQCGALLPVNGFSPESCQI--FFGLTACLSQVSSEDRSALWALVTFHGGSCQ 129
Query: 218 PELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLN 277
L KKCTHLI P P+G+K++ A + I I+ W ++ + +
Sbjct: 130 LNLNKKCTHLIV-----------P-EPKGEKYERAVKRTSIKIVTPDWVLDCVSEKRRKD 177
Query: 278 EESY 281
E Y
Sbjct: 178 EAFY 181
Score = 95 (38.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 177 VPQESYKVLPFSGLMICVTRI-PADERKEMEKLIVQNGGKYSPELTKKCTHLICD-ISFT 234
+P + K+ P ++ T P ++ ++KL + GG+ + E TKKCTHLI ++ T
Sbjct: 841 LPPPTKKLTPELTPLVLFTGFEPVQVQQYIKKLYIL-GGEVA-ECTKKCTHLIASKVTRT 898
Query: 235 IYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDS 286
+ FL V K HI+ W ++ R+ ++E++Y ++D+
Sbjct: 899 VKFLT--------AISVVK-----HIVTPDWLEECFKRQTFIDEQNYILRDA 937
Score = 87 (35.7 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 32/127 (25%), Positives = 52/127 (40%)
Query: 53 HVISSS-DHEKFEDLRAK-GCNLLGPQCVLSCAKENRALPKQGFT--CCLAMDGVKVIAS 108
H+IS D+ + + R ++ P V + LP GF+ C G+ S
Sbjct: 48 HIISEDGDNPEVGEAREVFDLPVVKPSWVTLSVQCGALLPVNGFSPESCQIFFGLTACLS 107
Query: 109 GFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
+++ + LVT GG Q + +IV KY+ A+ IVT +W+
Sbjct: 108 QVSSEDRSALWALVTFHGGSCQLNLNKKCTHLIVPEPKGEKYERAVKRTSIKIVTPDWVL 167
Query: 169 QCWNEHR 175
C +E R
Sbjct: 168 DCVSEKR 174
Score = 70 (29.7 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 177 VPQESYKVLPFSGLMICVTRIPAD-ERKEM----EKLIVQNGGKYSPELTKKCTHLIC 229
+P+ES+ + G + + P K++ +++I +GG P T +CTHL+C
Sbjct: 587 IPEESFLL----GCVFAIADYPEQMSDKQLLATWKRIIQAHGGTVDPTFTSRCTHLLC 640
Score = 69 (29.3 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 685 TPLPGFERFR-FCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLC-KFAGGLKYEA 742
TPL F F V QY +K ++LG + E TKK THL+ K +K+
Sbjct: 853 TPLVLFTGFEPVQVQQYIKK--------LYILGGEVAE-CTKKCTHLIASKVTRTVKFLT 903
Query: 743 ACKWGIPSITSEWIYECVRQNEVVSLDHF 771
A +T +W+ EC ++ + ++
Sbjct: 904 AISVVKHIVTPDWLEECFKRQTFIDEQNY 932
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 403 ASEMRK-LVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWL 461
+SE R L +V GGS ++ N TH++V + +K E R++ I ++V W+
Sbjct: 110 SSEDRSALWALVTFHGGSCQLNLNKKCTHLIVPE-PKGEKYE-RAVKRTSI-KIVTPDWV 166
Query: 462 EDCDRERR 469
DC E+R
Sbjct: 167 LDCVSEKR 174
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 415 RGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWL 461
+ G ++ VSYN +HI+ + D EV + + VVK +W+
Sbjct: 33 KAGKAKEVSYNALASHIIS---EDGDNPEVGEAREVFDLPVVKPSWV 76
>UNIPROTKB|F1PT21 [details] [associations]
symbol:ECT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0035023 "regulation of Rho protein
signal transduction" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] InterPro:IPR000219 InterPro:IPR001331
InterPro:IPR026817 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50010
SMART:SM00325 InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634
GO:GO:0005737 GO:GO:0005096 GO:GO:0043547 GO:GO:0035556
GO:GO:0000910 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
GO:GO:0000902 GO:GO:0045666 GO:GO:0035023 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 PANTHER:PTHR16777:SF0
GeneTree:ENSGT00700000104481 EMBL:AAEX03017394
Ensembl:ENSCAFT00000024536 Uniprot:F1PT21
Length = 918
Score = 191 (72.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 63/268 (23%), Positives = 122/268 (45%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
+++ F +L ++GP +L+CA++ LP F+C C +M + + +G
Sbjct: 129 IVTDFQDSVFNELHKMDHRIVGPPVILNCAQKGEPLP---FSCRPLYCTSMMNLVLCFTG 185
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ ++ LV MGGV++ V+ ++ K++ A++ L PI+ W+Y
Sbjct: 186 FRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRIAVS-LGTPIMKSEWIY 244
Query: 169 QCW---NEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE + +KV PF ++ +E+ ME++ GG P
Sbjct: 245 KAWERRNEQDFSASVDDFKNEFKVPPFQDCILSFLGFSDEEKTNMEEMTKMQGGNCLPVG 304
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEES 280
++CTHL+ + + P+ P +K+ ++++ ++WF S+ A E
Sbjct: 305 DERCTHLVVEENIV---KELPFEP-------SKK---LYVVKQEWFWGSIQMDARAGETM 351
Query: 281 YTVQDSSVSS-KKTV-MGSLTKQHSQVK 306
Y + ++ KK+V + SL +S K
Sbjct: 352 YLYEKANTPELKKSVSLLSLNTPNSNRK 379
Score = 43 (20.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 506 KESSVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQN 561
K S HSLS +L +N+ P S N E + K SS +T VPS+Q+
Sbjct: 403 KRPSAEHSLSIGSLLDISNT----PES-SINYGETPKSCTK--SSKNSTPVPSKQS 451
>UNIPROTKB|J9NX43 [details] [associations]
symbol:ECT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0035023 "regulation of Rho protein
signal transduction" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] InterPro:IPR000219 InterPro:IPR001331
InterPro:IPR026817 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50010
SMART:SM00325 InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634
GO:GO:0005737 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0035556 GO:GO:0000910 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0000902 GO:GO:0045666
GO:GO:0035023 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
PANTHER:PTHR16777:SF0 GeneTree:ENSGT00700000104481 OMA:FERRSHT
EMBL:AAEX03017394 Ensembl:ENSCAFT00000049237 Uniprot:J9NX43
Length = 942
Score = 191 (72.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 63/268 (23%), Positives = 122/268 (45%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
+++ F +L ++GP +L+CA++ LP F+C C +M + + +G
Sbjct: 98 IVTDFQDSVFNELHKMDHRIVGPPVILNCAQKGEPLP---FSCRPLYCTSMMNLVLCFTG 154
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ ++ LV MGGV++ V+ ++ K++ A++ L PI+ W+Y
Sbjct: 155 FRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRIAVS-LGTPIMKSEWIY 213
Query: 169 QCW---NEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE + +KV PF ++ +E+ ME++ GG P
Sbjct: 214 KAWERRNEQDFSASVDDFKNEFKVPPFQDCILSFLGFSDEEKTNMEEMTKMQGGNCLPVG 273
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEES 280
++CTHL+ + + P+ P +K+ ++++ ++WF S+ A E
Sbjct: 274 DERCTHLVVEENIV---KELPFEP-------SKK---LYVVKQEWFWGSIQMDARAGETM 320
Query: 281 YTVQDSSVSS-KKTV-MGSLTKQHSQVK 306
Y + ++ KK+V + SL +S K
Sbjct: 321 YLYEKANTPELKKSVSLLSLNTPNSNRK 348
Score = 43 (20.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 506 KESSVRHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQN 561
K S HSLS +L +N+ P S N E + K SS +T VPS+Q+
Sbjct: 372 KRPSAEHSLSIGSLLDISNT----PES-SINYGETPKSCTK--SSKNSTPVPSKQS 420
>RGD|1307547 [details] [associations]
symbol:Paxip1 "PAX interacting (with transcription-activation
domain) protein 1" species:10116 "Rattus norvegicus" [GO:0000416
"positive regulation of histone H3-K36 methylation" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=ISO] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=ISO] [GO:0035066
"positive regulation of histone acetylation" evidence=ISO]
[GO:0035097 "histone methyltransferase complex" evidence=ISO]
[GO:0043542 "endothelial cell migration" evidence=ISO] [GO:0045830
"positive regulation of isotype switching" evidence=ISO]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISO]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=ISO] [GO:0060612 "adipose
tissue development" evidence=ISO] [GO:0060717 "chorion development"
evidence=ISO] InterPro:IPR001357 Pfam:PF00533 RGD:1307547
GO:GO:0060612 GO:GO:0010212 GO:GO:0035066 GO:GO:0001570
GO:GO:0031398 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0051568 GO:GO:0030330 GO:GO:0051571 GO:GO:0043542
GO:GO:0035097 GO:GO:0060261 GO:GO:0060717 GO:GO:0000416
GO:GO:0045830 IPI:IPI00949383 Ensembl:ENSRNOT00000066753
ArrayExpress:F1LVY0 Uniprot:F1LVY0
Length = 994
Score = 130 (50.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 53/238 (22%), Positives = 103/238 (43%)
Query: 534 EENREERAEIHMKRES-SLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLST 592
++ + + H+ + S +L+ +P QQ L L + Q + ++ F + +
Sbjct: 473 QQQQMQNQAAHLSQTSQALQHQVLP-QQPLQLPLQPPPQQQ-QQQQLFGHDPAVEIPEES 530
Query: 593 VFRGKIFRFSNSFPEDRRAE--IVQW--VNQGRGEVVNDD-AKQNVHFTIECHGVIPKSA 647
G +F ++ +PE + + W + Q G V+ + H E V A
Sbjct: 531 FLLGCVFAIAD-YPEQMSDKQLLATWKRIIQAHGGTVDPTFTSRCTHLLCESQ-VSSMYA 588
Query: 648 DA--SETTYVSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDR 705
A V++HW+ + L+ L+ L+ P+ + V+ + + DR
Sbjct: 589 QALRERKRCVTAHWLNTVLKKKKLMPP-HRALHFPVAFPPGGKPCSQHIISVTGFVDNDR 647
Query: 706 VLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQN 763
L+ + ++ GAK+ L + T L+CK GLKYE A +W IP + ++W+ + + N
Sbjct: 648 DDLKLMAYLAGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNAQWLGDILLGN 705
Score = 127 (49.8 bits), Expect = 0.00053, P = 0.00053
Identities = 60/261 (22%), Positives = 101/261 (38%)
Query: 659 WIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAK 718
W+ ++ G LL V +SP CQ F C+SQ +DR L L G
Sbjct: 13 WVTLSVQCGTLLPVNG---FSPESCQI----FFGLTACLSQVSSEDRSALWALVTFHGGS 65
Query: 719 FMEKLTKKVTHLLCKFAGGLKYEAACK-WGIPSITSEWIYECVRQNEVVSLDHFSPKEVT 777
L KK THL+ G KYE A K I +T +W+ +CV + + P+ +
Sbjct: 66 CQLNLNKKCTHLIVPEPKGEKYERAVKRTSIKIVTPDWVLDCVSEKRRKDEASYHPRLII 125
Query: 778 THDREAGLCTVSQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITRSDNLRD 837
+ E Q Q + + S + + P + + + +++ + + D
Sbjct: 126 YEEEEEEEEEEGDNEEQDSQNEGSTDKSSAASSAEASPADQPCSPKARAE-VSKGELMFD 184
Query: 838 EANQTSAHNKRARISEDEDHDTLPGVHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVI 897
+++ +S K+ R S + P + HR G + VP + D+
Sbjct: 185 DSSDSSPE-KQER-SLNWAPAEAPPLSTAQ-HRLPQGKGPGLINLCANVPPVPGDILP-- 239
Query: 898 EDLVEQTSKV-QDLKSPERSE 917
D+ Q+L+S ER E
Sbjct: 240 PDMRGNLMAAGQNLQSSERPE 260
Score = 102 (41.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
F GL C++++ +++R + L+ +GG L KKCTHLI P P+G
Sbjct: 37 FFGLTACLSQVSSEDRSALWALVTFHGGSCQLNLNKKCTHLIV-----------P-EPKG 84
Query: 247 DKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
+K++ A + I I+ W ++ + +E SY
Sbjct: 85 EKYERAVKRTSIKIVTPDWVLDCVSEKRRKDEASY 119
Score = 90 (36.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 177 VPQESYKVLPFSGLMICVTRI-PADERKEMEKLIVQNGGKYSPELTKKCTHLICD-ISFT 234
+P + K+ P + T P ++ ++KL + GG+ + E TKKCTHLI ++ T
Sbjct: 779 LPPPTKKLTPELTPYVLFTGFEPVQVQQYIKKLYIL-GGEVA-ESTKKCTHLIASKVTRT 836
Query: 235 IYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDS 286
+ FL V K HI+ W ++ R+ ++E++Y ++D+
Sbjct: 837 VKFLT--------AISVVK-----HIVTPDWLEECFKRQMFIDEQNYILRDA 875
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 89 LPKQGFT--CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVL 146
LP GF+ C G+ S +++ + LVT GG Q + +IV
Sbjct: 24 LPVNGFSPESCQIFFGLTACLSQVSSEDRSALWALVTFHGGSCQLNLNKKCTHLIVPEPK 83
Query: 147 AAKYKWALNILKKPIVTVNWLYQCWNEHRVVPQESY 182
KY+ A+ IVT +W+ C +E R + SY
Sbjct: 84 GEKYERAVKRTSIKIVTPDWVLDCVSEKRRKDEASY 119
Score = 72 (30.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 177 VPQESYKVLPFSGLMICVTRIPAD-ERKEM----EKLIVQNGGKYSPELTKKCTHLICD 230
+P+ES+ + G + + P K++ +++I +GG P T +CTHL+C+
Sbjct: 526 IPEESFLL----GCVFAIADYPEQMSDKQLLATWKRIIQAHGGTVDPTFTSRCTHLLCE 580
Score = 68 (29.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 403 ASEMRK-LVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWL 461
+SE R L +V GGS ++ N TH++V + +K E R++ I ++V W+
Sbjct: 48 SSEDRSALWALVTFHGGSCQLNLNKKCTHLIVPE-PKGEKYE-RAVKRTSI-KIVTPDWV 104
Query: 462 EDCDRERR---EISILQRHVAYD 481
DC E+R E S R + Y+
Sbjct: 105 LDCVSEKRRKDEASYHPRLIIYE 127
Score = 68 (29.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 713 FVLGAKFMEKLTKKVTHLLC-KFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHF 771
++LG + E TKK THL+ K +K+ A +T +W+ EC ++ + ++
Sbjct: 812 YILGGEVAES-TKKCTHLIASKVTRTVKFLTAISVVKHIVTPDWLEECFKRQMFIDEQNY 870
Score = 66 (28.3 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 19/87 (21%), Positives = 43/87 (49%)
Query: 396 IVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQ- 454
++ GFE ++++ + + GG S TH++ ++ R V+ L ++ +++
Sbjct: 794 VLFTGFEPVQVQQYIKKLYILGGEVAESTKK-CTHLIASKVT----RTVKFLTAISVVKH 848
Query: 455 VVKSTWLEDCDRERREISILQRHVAYD 481
+V WLE+C + + I Q ++ D
Sbjct: 849 IVTPDWLEECFKRQMFIDE-QNYILRD 874
>UNIPROTKB|F1P482 [details] [associations]
symbol:PAXIP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000416 "positive regulation of histone H3-K36
methylation" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=IEA] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IEA] [GO:0035066
"positive regulation of histone acetylation" evidence=IEA]
[GO:0035097 "histone methyltransferase complex" evidence=IEA]
[GO:0043542 "endothelial cell migration" evidence=IEA] [GO:0045830
"positive regulation of isotype switching" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IEA] [GO:0060612 "adipose
tissue development" evidence=IEA] [GO:0060717 "chorion development"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0010212
GO:GO:0035066 GO:GO:0031398 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330 GO:GO:0051571
GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 OMA:DIQQINR GO:GO:0000416
GO:GO:0045830 GeneTree:ENSGT00600000084454 EMBL:AADN02000335
EMBL:AADN02000336 EMBL:AADN02000337 IPI:IPI00594414
Ensembl:ENSGALT00000010241 Uniprot:F1P482
Length = 1062
Score = 144 (55.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 612 EIVQWVNQGRGEVVNDDAKQNVHFTIEC--HGVIPKSADASETTYVSSHWIRSCLEDGCL 669
+++Q + G+ + V+ +A + H E H + +S + + V W+ + G L
Sbjct: 28 KVIQLLKAGKAKEVSYNALAS-HIISEDGDHPEVGESREVFDLPVVKPSWVILSVRCGAL 86
Query: 670 LDVGSHIL-YSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVT 728
L + +SP CQT F C+SQ +DR L L G L KK T
Sbjct: 87 LPYPLSVNGFSPESCQT----FFGVTACLSQVSSEDRNTLWALITFYGGNCQLNLNKKCT 142
Query: 729 HLLCKFAGGLKYEAACKW-GIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDRE 782
HL+ G KYE ACK I +T EW+ + V + P+ + + E
Sbjct: 143 HLIVPEPKGEKYECACKHDSIKIVTPEWVVDSVADKAKKEETPYHPRLIIYEEEE 197
Score = 124 (48.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 64/312 (20%), Positives = 126/312 (40%)
Query: 466 RERREISILQRHVAYDLL--LPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRST 523
R ++++ Q+H L L ++ + L NL Q + + + ++ +
Sbjct: 487 RPQQQLQFQQQHALQQQLHQLQQQQLQQQQLQQLQQQNLQQQQLQHQQQQIQQQQLQQQH 546
Query: 524 NSGIGMPLSLEENREERAEIHMKRES-SLEATAVPSQQNLLSALSDENKTQLRTKEDFRV 582
+ ++ + +A H+ + S +L+ AV QQ + + QL+ + F
Sbjct: 547 LQRLHQQHQ-QQQMQNQATQHLTQTSQALQHQAVTQQQQH----HQQQQAQLQQQPLFGH 601
Query: 583 QSLQNMKLSTVFRGKIFRFSNSFPEDRRAE--IVQW--VNQGRGEVVNDDAKQN-VHFTI 637
+ G +F ++ +PE + + W + Q G V+ H
Sbjct: 602 DPSVEIPEDYFLLGCVFAIAD-YPEQMSDKQLLATWKRIIQAHGGTVDPTLTSRCTHLLC 660
Query: 638 ECHGVIPKSADA--SETTYVSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFR 694
E V A A +++HW+ S L+ + V H L+ P+ +
Sbjct: 661 ESQ-VSNMYAQALRERKRCITAHWLNSILKKKKM--VPPHRALHFPVAFPPGGKPCSQHI 717
Query: 695 FCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFA---GGLKYEAACKWGIPSI 751
V+ + + DR L+ + ++ GAK+ L + T L+CK GLKYE A +W IP +
Sbjct: 718 ISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSNTVLICKETIRPSGLKYEKAKEWRIPCV 777
Query: 752 TSEWIYECVRQN 763
++W+ + + N
Sbjct: 778 NAQWLCDILLGN 789
Score = 108 (43.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
F G+ C++++ +++R + LI GG L KKCTHLI P P+G
Sbjct: 104 FFGVTACLSQVSSEDRNTLWALITFYGGNCQLNLNKKCTHLIV-----------P-EPKG 151
Query: 247 DKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
+K++ A + I I+ +W S+A +A E Y
Sbjct: 152 EKYECACKHDSIKIVTPEWVVDSVADKAKKEETPY 186
Score = 65 (27.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 31/123 (25%), Positives = 46/123 (37%)
Query: 53 HVISSS-DH-EKFEDLRAKGCNLLGPQCVLSCAKENRALPK----QGFT--CCLAMDGVK 104
H+IS DH E E ++ P V+ + LP GF+ C GV
Sbjct: 49 HIISEDGDHPEVGESREVFDLPVVKPSWVILSVRCGALLPYPLSVNGFSPESCQTFFGVT 108
Query: 105 VIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTV 164
S +++ + L+T GG Q + +IV KY+ A IVT
Sbjct: 109 ACLSQVSSEDRNTLWALITFYGGNCQLNLNKKCTHLIVPEPKGEKYECACKHDSIKIVTP 168
Query: 165 NWL 167
W+
Sbjct: 169 EWV 171
Score = 57 (25.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 384 SEDNDLYLSDCRIV--LVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADK 441
+E+ +L + + R + + F ++ V + + G ++ VSYN +HI+ + D
Sbjct: 1 AEEEELKVPEERCIKDVKFFTVGDIDPKVIQLLKAGKAKEVSYNALASHIIS---EDGDH 57
Query: 442 REVRSLASLGIIQVVKSTWL 461
EV + + VVK +W+
Sbjct: 58 PEVGESREVFDLPVVKPSWV 77
>POMBASE|SPAC23C4.18c [details] [associations]
symbol:rad4 "BRCT domain protein Rad4" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006270 "DNA
replication initiation" evidence=ISS] [GO:0031261 "DNA replication
preinitiation complex" evidence=ISO] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=TAS] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0044732 "mitotic spindle pole
body" evidence=IDA] [GO:0071163 "DNA replication preinitiation
complex assembly" evidence=IMP] InterPro:IPR001357
PomBase:SPAC23C4.18c Pfam:PF00533 GO:GO:0005829 GO:GO:0000077
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0044732 GO:GO:0031261
GO:GO:0006270 GO:GO:0043596 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0033314 GO:GO:0071163 KO:K03507
OrthoDB:EOG4N33X8 EMBL:D16627 EMBL:X62676 PIR:B40727
RefSeq:NP_593190.1 ProteinModelPortal:P32372 IntAct:P32372
MINT:MINT-1179553 STRING:P32372 EnsemblFungi:SPAC23C4.18c.1
GeneID:2543281 KEGG:spo:SPAC23C4.18c eggNOG:NOG288412 OMA:LLITESH
NextBio:20804301 Uniprot:P32372
Length = 648
Score = 158 (60.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 53/211 (25%), Positives = 97/211 (45%)
Query: 100 MDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKK 159
+ G + + D+ ++ +I T +G ++ T DV+ +I + KYK+A +
Sbjct: 7 LKGFVICCTSIDLKQRTEISTKATKLGAAYRSDFTKDVTHLIAGDFDTPKYKFAAK--SR 64
Query: 160 P---IVTVNW---LYQCWNEHRVVPQE---SYKVLP-FSGLMICVTRIPADERKEMEKLI 209
P I++ W LY+ W + + LP +C+T I ER +E +
Sbjct: 65 PDIKIMSSEWIPVLYESWVQGEDLDDGLLVDKHFLPTLFKCRVCLTNIGQPERSRIENYV 124
Query: 210 VQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQS 269
+++GG + P+LT+ THLI T G K++ A +W I+++ +W QS
Sbjct: 125 LKHGGTFCPDLTRDVTHLIAG------------TSSGRKYEYALKW-KINVVCVEWLWQS 171
Query: 270 MARRACLNEESYTVQDSSVSSKKTVMGSLTK 300
+ R A L E Y D + ++K +G+ +
Sbjct: 172 IQRNAVL-EPQYFQLD--MPAEKIGLGAYVR 199
Score = 146 (56.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 108/540 (20%), Positives = 211/540 (39%)
Query: 391 LSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASL 450
L CR+ L E ++ N V + GG+ +TH++ GT S K E A
Sbjct: 102 LFKCRVCLTNIGQPERSRIENYVLKHGGTFCPDLTRDVTHLIAGT-SSGRKYEY---ALK 157
Query: 451 GIIQVVKSTWL-EDCDRERREISILQRHVAYDLLLPKESAWSTKGAPLCTN-NLNQGKES 508
I VV WL + R ++L+ + L +P E GA + + N + K
Sbjct: 158 WKINVVCVEWLWQSIQRN----AVLEPQY-FQLDMPAEKIGL--GAYVRLDPNTTEAKSY 210
Query: 509 SVRHSLSSD-EMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNLLSALS 567
S +S + E + + + LE +R + KR+ S+ + + + S+ S
Sbjct: 211 SENQKISKNKEKSGQSLAALAEEADLEPVIMKRGK---KRDRSILWEELNNGKFEFSSRS 267
Query: 568 DENKTQLRTKEDFRVQSLQNMKLSTVFR----GKIFR----FSNSFPEDRRAEIVQWVNQ 619
+EN L VQ L+ +L T K+F+ + FP + + + + ++
Sbjct: 268 EENSVLLDDFTPETVQPLEENELDTELNIENEAKLFKNLTFYLYEFPNTKVSRLHKCLSD 327
Query: 620 GRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSHWIRSCLEDGCLLDVGSHILYS 679
G++ ++ + F + H V+ WI CL + + H L
Sbjct: 328 NGGQI-SEFLSSTIDFVVIPHYFPVDELPIFSFPTVNEWWIERCLYYKKIFGIDEHALAK 386
Query: 680 PLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCK----FA 735
P + +P F ++ ++ ++ L+ +LGA E L + + LL F+
Sbjct: 387 PFFRPSLVPYFNGLSIHLTGFKGEELSHLKKALTILGAVVHEFLGVQRSILLVNTNEPFS 446
Query: 736 --GGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGLCTVSQFPM 793
K + A +W + + W++ ++ + + D SP + + + + +F
Sbjct: 447 MKTRFKIQHATEWNVRVVGVAWLWNIIQSGKFI--DQVSPWAIDKKENQE----IKKFTN 500
Query: 794 QS-VQMSSADEPSQFINPLGG--LQSSSPQTMVHKIDDITRSDN-LRDEAN-QTSAHNKR 848
Q+ + ++D ++ N L + S+P + R +N +R Q ++++K
Sbjct: 501 QNNMVFPTSDRDTRLQNSLAQQPIGHSTPHNSPSLLSVKKRQNNHIRSNTLIQLNSNSKD 560
Query: 849 ARISEDEDHDTLPGVHLKDPHRSTNYNGDSMSKDNGEVPHIGSDVAAVIEDLVEQ-TSKV 907
+ I T+PG + +S+ ++ + V +I D L Q TS V
Sbjct: 561 STIFPRRSV-TVPGDKIDTVWKSSVTKPETPTSPQEHVSYIDPDAQREKHKLYAQLTSNV 619
Score = 140 (54.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 34/114 (29%), Positives = 56/114 (49%)
Query: 659 WIRS-CLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGA 717
W++ L+DG L+D H L + C R C++ + +R + N G
Sbjct: 82 WVQGEDLDDGLLVD--KHFLPTLFKC----------RVCLTNIGQPERSRIENYVLKHGG 129
Query: 718 KFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHF 771
F LT+ VTHL+ + G KYE A KW I + EW+++ +++N V+ +F
Sbjct: 130 TFCPDLTRDVTHLIAGTSSGRKYEYALKWKINVVCVEWLWQSIQRNAVLEPQYF 183
Score = 79 (32.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 22/80 (27%), Positives = 31/80 (38%)
Query: 186 PFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPE 245
P G +IC T I +R E+ + G Y + TK THLI F F
Sbjct: 6 PLKGFVICCTSIDLKQRTEISTKATKLGAAYRSDFTKDVTHLIAG-DFDTPKYKFAAKSR 64
Query: 246 GDKFKVAKRWGHIHIINRKW 265
D ++ W I ++ W
Sbjct: 65 PDIKIMSSEW--IPVLYESW 82
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 372 SNSD-VCVANDSQSEDNDLYL 391
SN D + AND Q+++N L L
Sbjct: 617 SNVDAIPPANDLQNQENGLLL 637
>ZFIN|ZDB-GENE-040831-2 [details] [associations]
symbol:ect2 "epithelial cell transforming sequence 2
oncogene" species:7955 "Danio rerio" [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] InterPro:IPR000219 InterPro:IPR001331
InterPro:IPR026817 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50010
SMART:SM00325 InterPro:IPR001357 Pfam:PF00533
ZFIN:ZDB-GENE-040831-2 GO:GO:0005634 GO:GO:0005737 GO:GO:0005096
GO:GO:0043547 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556
GO:GO:0000910 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
GO:GO:0000902 GO:GO:0045666 eggNOG:COG5422 GO:GO:0035023
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 HOGENOM:HOG000012876
HOVERGEN:HBG005563 OrthoDB:EOG4GHZNG PANTHER:PTHR16777:SF0
EMBL:BC096846 IPI:IPI00615470 UniGene:Dr.82499
ProteinModelPortal:Q4V9L0 SMR:Q4V9L0 STRING:Q4V9L0
InParanoid:Q4V9L0 ArrayExpress:Q4V9L0 Uniprot:Q4V9L0
Length = 976
Score = 185 (70.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC-CLAMDGVKVIASGF-D 111
V+ ++ L +LGP V+ CA + LP + M + + +GF
Sbjct: 131 VLKDFQAPEYSFLYKNDSRILGPPAVMRCANKGEPLPFSSRPLYSMTMLNLSLCFTGFRK 190
Query: 112 VDEKFKIEKLVTAMGGVLQTKA-TLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQC 170
DE + LV MGG ++ + V+ +I ++ KY+ A+ + PI+T +W+ +
Sbjct: 191 KDEVVALVNLVHHMGGTVRKDFDSAKVTHLIARSTHGEKYRLAV-CMGTPILTPDWIRKA 249
Query: 171 WNEHR---------VVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELT 221
W EHR + + +KV PF ++ +E+ ME+ ++GG++
Sbjct: 250 W-EHRDDINFHAGNELFRTEFKVPPFQDCVLSFLGFSEEEKNNMEERTQKHGGRFQAVGD 308
Query: 222 KKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
++CTHL+ + + +I L P+TP +KR ++++ ++WF S+ A E Y
Sbjct: 309 ERCTHLVVEEN-SIKEL--PFTP-------SKR---LYVVKQEWFWGSIQMDARAGESMY 355
Query: 282 TVQD-SSVSSKKTV-MGSLTKQHS 303
+ + S + KK V + SLT +S
Sbjct: 356 SYEKPESPAMKKAVSLLSLTTPNS 379
Score = 38 (18.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 18/72 (25%), Positives = 28/72 (38%)
Query: 772 SPKEVTTHDREAGLCTVSQFPMQSVQMSSADEPSQFINPLGGLQSSSPQTMVHKIDDITR 831
S KEV TH E T Q + V P+ + SS +++VH+++ I
Sbjct: 628 SLKEVMTHINEDKRKTEGQKQIFDVVYEVDGCPANLL--------SSHRSLVHRVETIAL 679
Query: 832 SDNLRDEANQTS 843
D D +
Sbjct: 680 GDKPCDRGEHVT 691
>UNIPROTKB|G4NCT3 [details] [associations]
symbol:MGG_01032 "BRCT domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR001357 Pfam:PF00533
EMBL:CM001235 GO:GO:0043581 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 RefSeq:XP_003717910.1 ProteinModelPortal:G4NCT3
EnsemblFungi:MGG_01032T0 GeneID:2674585 KEGG:mgr:MGG_01032
Uniprot:G4NCT3
Length = 840
Score = 136 (52.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 79/350 (22%), Positives = 143/350 (40%)
Query: 545 MKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVFRGKIFRFSNS 604
+K S + AVP Q+L A T + T +S + ++VF + + S
Sbjct: 198 LKAGESTKDIAVPCSQHLEGAT-----TTMPTTAPENTKS----RPASVFNHRTIKLSVD 248
Query: 605 FPEDRR--AEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSAD----ASETTYVSS- 657
P + R A I + +G G++ +D + +++ CH + D A + +V +
Sbjct: 249 LPLNERFLAIIRAHITKGGGKITDDVEECDIYI---CH--YREGDDYIYAAQKKKHVGNI 303
Query: 658 HWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGA 717
W+ + +L+ P+ + +PGFE + VS Y + R L NL GA
Sbjct: 304 AWLLYLVTHDEWTSPLRRLLHYPVP-RGGIPGFEGCKITVSNYGGEARTYLENLIRACGA 362
Query: 718 KFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSP-KEV 776
+F + + + THL+ K EAA W + + WI E + E + H S K+
Sbjct: 363 EFTKTMKQDNTHLITARNSSEKCEAALDWNVTMVNHLWIEESYAKCE---MQHPSNNKKY 419
Query: 777 TTHDREAGLCTV-SQFPMQSVQMSSADEPS--QFINPLGGLQSSSPQTMVHKIDDITRSD 833
TT + L V Q + + P ++ G +S + V ++I ++
Sbjct: 420 TTFPQRTNLSEVIGQTSLDETVLREVYYPGGEDVVSEAGSDTASEQENEVEAGEEI--AE 477
Query: 834 NLRDEANQTSAHNKRARISEDEDHDTLPGVHLKDPHRSTNYNGDSMSKDN 883
+ +A K++ +S+ ++ + L P RST G K+N
Sbjct: 478 VAVPVRAKPAAKGKKSPLSKADNSNKAA---LATPARSTRSGGSG--KEN 522
Score = 79 (32.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 120 KLVTAMGG-VLQTK-----ATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNE 173
K+V GG VL+ + A + + ++ + +Y A L P+VT NW+ +
Sbjct: 32 KIVLRNGGEVLEPESNGKLAVHEATHIVSDTIDFEEYTAAGECLV-PVVTCNWITNSLMK 90
Query: 174 HRVV---PQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICD 230
++ P L F + + +P +++ + + GG S +LTK TH IC
Sbjct: 91 RKLAALRPHSPDPRLIFHAVNVTCADLPPTDKESIIGATIALGGTESKDLTKLTTH-ICA 149
Query: 231 ISF 233
+S+
Sbjct: 150 LSY 152
Score = 51 (23.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 187 FSGLMICVTRIPADERK-----EMEKLIVQNGGKY-SPELTKK-----CTHLICDISFTI 235
FSG I +P+ K E K++++NGG+ PE K TH++ D TI
Sbjct: 9 FSGCRIAF--VPSSTLKPSTIAEATKIVLRNGGEVLEPESNGKLAVHEATHIVSD---TI 63
Query: 236 YFLNFPYTPEGDKFK--VAKRWGHIHIINRKWF---DQSMARRACLNEESYTVQDSSVSS 290
F YT G+ V W ++ RK S R + + T D +
Sbjct: 64 DFEE--YTAAGECLVPVVTCNWITNSLMKRKLAALRPHSPDPRLIFHAVNVTCADLPPTD 121
Query: 291 KKTVMGS 297
K++++G+
Sbjct: 122 KESIIGA 128
>UNIPROTKB|A0JNA8 [details] [associations]
symbol:PAXIP1 "PAX-interacting protein 1" species:9913 "Bos
taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001357 Pfam:PF00533 GO:GO:0006355
GO:GO:0006281 GO:GO:0006351 GO:GO:0006310 GO:GO:0016363
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 eggNOG:NOG310206
KO:K14972 EMBL:BC126589 IPI:IPI00711253 RefSeq:NP_001071385.1
UniGene:Bt.21228 ProteinModelPortal:A0JNA8 STRING:A0JNA8
PRIDE:A0JNA8 GeneID:513213 KEGG:bta:513213 CTD:22976
HOGENOM:HOG000115463 HOVERGEN:HBG061191 InParanoid:A0JNA8
OrthoDB:EOG4CRKZF NextBio:20870752 ArrayExpress:A0JNA8
Uniprot:A0JNA8
Length = 984
Score = 128 (50.1 bits), Expect = 0.00041, P = 0.00041
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 608 DRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCL 664
D +++Q + G+ + V+ +A + H E G P+ +A E V W+ +
Sbjct: 23 DLDPQVIQLLKAGKAKEVSYNALAS-HIISE-DGDNPEVGEAREVFDLPVVKPSWVILSV 80
Query: 665 EDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT 724
+ G LL V +SP CQ F C+SQ +DR L + G L
Sbjct: 81 QCGALLPVNG---FSPESCQI----FFGITACLSQVSPEDRSALWAMLTFHGGGCQLNLN 133
Query: 725 KKVTHLLCKFAGGLKYEAACKWG-IPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDRE 782
+K THL+ G KYE A + I +T +W+ +C+ + + P+ + + E
Sbjct: 134 RKCTHLVVPEPKGEKYECALRRASIKIVTPDWVLDCISEKTRKDEALYHPRLIVYEEEE 192
Score = 122 (48.0 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 41/176 (23%), Positives = 82/176 (46%)
Query: 596 GKIFRFSNSFPEDRRAE--IVQW--VNQGRGEVVNDD-AKQNVHFTIECH--GVIPKSAD 648
G +F ++ +PE + + W + Q G V+ + + H E G+ ++
Sbjct: 523 GCVFAIAD-YPEQMSDKQLLATWKRIIQAHGGAVDPTFSSRCTHLLCESQVSGLFAQAMK 581
Query: 649 ASETTYVSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVL 707
+ +++HW+ + L+ L V H L+ P+ + V+ + + DR
Sbjct: 582 ERKRC-ITAHWLNTVLKKKKL--VPPHRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDD 638
Query: 708 LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQN 763
L+ + ++ GAK+ L + T L+C+ GLKYE A +W IP + ++W+ + + N
Sbjct: 639 LKLMAYLAGAKYTGYLCRSNTVLICREPTGLKYEKAKEWRIPCVNAQWLGDILLGN 694
Score = 95 (38.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 32/134 (23%), Positives = 60/134 (44%)
Query: 153 ALNILKKPIVTVNWLY---QCWNEHRV--VPQESYKVLPFSGLMICVTRIPADERKEMEK 207
A + P+V +W+ QC V ES ++ F G+ C++++ ++R +
Sbjct: 62 AREVFDLPVVKPSWVILSVQCGALLPVNGFSPESCQI--FFGITACLSQVSPEDRSALWA 119
Query: 208 LIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFD 267
++ +GG L +KCTHL+ P P+G+K++ A R I I+ W
Sbjct: 120 MLTFHGGGCQLNLNRKCTHLVV-----------P-EPKGEKYECALRRASIKIVTPDWVL 167
Query: 268 QSMARRACLNEESY 281
++ + +E Y
Sbjct: 168 DCISEKTRKDEALY 181
Score = 87 (35.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 43/171 (25%), Positives = 69/171 (40%)
Query: 7 FKEAKVYMSRNLVAPEIFDALLDALKLNGAEVELCCDPSRTGPNDFHVISSS-DHEKFED 65
FKE K Y +L P++ LL A K EV S H+IS D+ + +
Sbjct: 13 FKEVKYYAVGDL-DPQVIQ-LLKAGKAK--EVSYNALAS-------HIISEDGDNPEVGE 61
Query: 66 LRAK-GCNLLGPQCVLSCAKENRALPKQGFT--CCLAMDGVKVIASGFDVDEKFKIEKLV 122
R ++ P V+ + LP GF+ C G+ S +++ + ++
Sbjct: 62 AREVFDLPVVKPSWVILSVQCGALLPVNGFSPESCQIFFGITACLSQVSPEDRSALWAML 121
Query: 123 TAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNE 173
T GG Q + ++V KY+ AL IVT +W+ C +E
Sbjct: 122 TFHGGGCQLNLNRKCTHLVVPEPKGEKYECALRRASIKIVTPDWVLDCISE 172
Score = 59 (25.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 416 GGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDC--DRERREISI 473
GGG + ++ N TH+VV + +K E +L I ++V W+ DC ++ R++ ++
Sbjct: 125 GGGCQ-LNLNRKCTHLVVPE-PKGEKYEC-ALRRASI-KIVTPDWVLDCISEKTRKDEAL 180
Query: 474 LQ-RHVAYDLLLPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRSTNSGIGMPLS 532
R + Y+ +E G ++ N+G SS E S G P
Sbjct: 181 YHPRLIVYEEEEEEEEEEEGAGNEE-PDSPNEGSTDGKSSPASSQE-----GSPSGEPPF 234
Query: 533 LEENREERAEIHMKRESSLEATAVPSQQNL 562
++ E+++ + + S +++ ++NL
Sbjct: 235 SPKSSAEKSKGELMFDDSSDSSPEKQERNL 264
Score = 55 (24.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 401 FEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTW 460
+ ++ V + + G ++ VSYN +HI+ + D EV + + VVK +W
Sbjct: 19 YAVGDLDPQVIQLLKAGKAKEVSYNALASHIIS---EDGDNPEVGEAREVFDLPVVKPSW 75
Query: 461 L 461
+
Sbjct: 76 V 76
>UNIPROTKB|G3MZP9 [details] [associations]
symbol:PAXIP1 "PAX-interacting protein 1" species:9913 "Bos
taurus" [GO:0060717 "chorion development" evidence=IEA] [GO:0060612
"adipose tissue development" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0051571 "positive regulation of histone
H3-K4 methylation" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] [GO:0045830 "positive regulation of
isotype switching" evidence=IEA] [GO:0043542 "endothelial cell
migration" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0035066 "positive regulation of histone
acetylation" evidence=IEA] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=IEA] [GO:0030330 "DNA damage
response, signal transduction by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000416 "positive
regulation of histone H3-K36 methylation" evidence=IEA]
InterPro:IPR001357 Pfam:PF00533 GO:GO:0060612 GO:GO:0010212
GO:GO:0035066 GO:GO:0001570 GO:GO:0031398 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0051568 GO:GO:0030330
GO:GO:0051571 GO:GO:0043542 GO:GO:0035097 GO:GO:0060261 OMA:DIQQINR
GO:GO:0060717 GO:GO:0000416 GO:GO:0045830
GeneTree:ENSGT00600000084454 EMBL:DAAA02012116
Ensembl:ENSBTAT00000064484 Uniprot:G3MZP9
Length = 1195
Score = 122 (48.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 41/176 (23%), Positives = 82/176 (46%)
Query: 596 GKIFRFSNSFPEDRRAE--IVQW--VNQGRGEVVNDD-AKQNVHFTIECH--GVIPKSAD 648
G +F ++ +PE + + W + Q G V+ + + H E G+ ++
Sbjct: 734 GCVFAIAD-YPEQMSDKQLLATWKRIIQAHGGAVDPTFSSRCTHLLCESQVSGLFAQAMK 792
Query: 649 ASETTYVSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVL 707
+ +++HW+ + L+ L V H L+ P+ + V+ + + DR
Sbjct: 793 ERKRC-ITAHWLNTVLKKKKL--VPPHRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDD 849
Query: 708 LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQN 763
L+ + ++ GAK+ L + T L+C+ GLKYE A +W IP + ++W+ + + N
Sbjct: 850 LKLMAYLAGAKYTGYLCRSNTVLICREPTGLKYEKAKEWRIPCVNAQWLGDILLGN 905
Score = 91 (37.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
F G+ C++++ ++R + ++ +GG L +KCTHL+ P P+G
Sbjct: 11 FFGITACLSQVSPEDRSALWAMLTFHGGGCQLNLNRKCTHLVV-----------P-EPKG 58
Query: 247 DKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
+K++ A R I I+ W ++ + +E Y
Sbjct: 59 EKYECALRRASIKIVTPDWVLDCISEKTRKDEALY 93
Score = 69 (29.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 93 GFT--CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKY 150
GF+ C G+ S +++ + ++T GG Q + ++V KY
Sbjct: 2 GFSPESCQIFFGITACLSQVSPEDRSALWAMLTFHGGGCQLNLNRKCTHLVVPEPKGEKY 61
Query: 151 KWALNILKKPIVTVNWLYQCWNE 173
+ AL IVT +W+ C +E
Sbjct: 62 ECALRRASIKIVTPDWVLDCISE 84
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 416 GGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDC--DRERREISI 473
GGG + ++ N TH+VV + +K E +L I ++V W+ DC ++ R++ ++
Sbjct: 37 GGGCQ-LNLNRKCTHLVVPE-PKGEKYEC-ALRRASI-KIVTPDWVLDCISEKTRKDEAL 92
Query: 474 LQ-RHVAYDLLLPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRSTNSGIGMPLS 532
R + Y+ +E G ++ N+G SS E S G P
Sbjct: 93 YHPRLIVYEEEEEEEEEEEGAGNEE-PDSPNEGSTDGKSSPASSQE-----GSPSGEPPF 146
Query: 533 LEENREERAEIHMKRESSLEATAVPSQQNL 562
++ E+++ + + S +++ ++NL
Sbjct: 147 SPKSSAEKSKGELMFDDSSDSSPEKQERNL 176
>ZFIN|ZDB-GENE-041010-214 [details] [associations]
symbol:paxip1 "PAX interacting (with
transcription-activation domain) protein 1" species:7955 "Danio
rerio" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] InterPro:IPR001357 Pfam:PF00533
ZFIN:ZDB-GENE-041010-214 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00600000084454 EMBL:CR855328
IPI:IPI00489284 Ensembl:ENSDART00000144672 ArrayExpress:F1Q5Z1
Bgee:F1Q5Z1 Uniprot:F1Q5Z1
Length = 1122
Score = 125 (49.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 655 VSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCF 713
V++HW+ + L+ + V H L+ P + V+ + + DR L+ + +
Sbjct: 726 VTAHWLNTVLKKKKM--VPPHRTLHLPFSFPPGAKPCAQHIISVTGFVDSDRDDLKLMAY 783
Query: 714 VLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQN 763
+ GA++ L + T L+CK GLKYE A +W IP + ++W+ + + N
Sbjct: 784 LAGARYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNAQWLCDILLGN 833
Score = 82 (33.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 43/184 (23%), Positives = 78/184 (42%)
Query: 103 VKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIV 162
VK G D+D+K ++ L + G + A + +I ++ + + + P+V
Sbjct: 16 VKFYVVG-DIDQKV-VQLLKSGKGKEVSYNAL--ATHIIAEDGDNPEVGESREVFDLPVV 71
Query: 163 TVNWLY---QCWNEHRVV--PQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYS 217
+W+ +C + V ES +V F G+ C+ + A++ + I GG
Sbjct: 72 KPSWVILSVKCGDLLPVTGFSPESGQV--FFGVTACLPHL-AEDLNALWAFITFYGGDCQ 128
Query: 218 PELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLN 277
KKCTHL+ P P+G K++ A R +I I+ +W S+ + +
Sbjct: 129 LHFNKKCTHLVV-----------P-EPKGAKYECALRHNNIKIVTPEWILDSVKEKNRKD 176
Query: 278 EESY 281
E Y
Sbjct: 177 EMLY 180
Score = 70 (29.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 378 VANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLS 437
++ D +L+ D + +VG + + K+V +++ G G VSYN THI+
Sbjct: 1 MSEDDLKVPEELF-KDVKFYVVG-DIDQ--KVVQLLKSGKGKE-VSYNALATHIIA---E 52
Query: 438 EADKREVRSLASLGIIQVVKSTWL 461
+ D EV + + VVK +W+
Sbjct: 53 DGDNPEVGESREVFDLPVVKPSWV 76
>TAIR|locus:2132198 [details] [associations]
symbol:AT4G02110 "AT4G02110" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR001357
Pfam:PF00533 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161493
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 EMBL:AF001308
KO:K10728 IPI:IPI00534436 IPI:IPI01020132 PIR:T01512
RefSeq:NP_192120.4 UniGene:At.54093 ProteinModelPortal:O04251
SMR:O04251 PaxDb:O04251 PRIDE:O04251 GeneID:828135
KEGG:ath:AT4G02110 TAIR:At4g02110 eggNOG:KOG1929
HOGENOM:HOG000176902 InParanoid:O04251 OMA:CISADYL
Genevestigator:O04251 Uniprot:O04251
Length = 1329
Score = 140 (54.3 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 44/157 (28%), Positives = 74/157 (47%)
Query: 618 NQGRGEVVNDDAKQNVHFTIEC-HGVIPK---------SADASETTYVSSHWIRSCLEDG 667
N R ++V+ FT C H ++ K +A S V+ W+ + G
Sbjct: 28 NSLRSKLVSGGGVDVGQFTQSCTHLIVDKLLYDDPICVAARNSGKVVVTGSWVDHSFDIG 87
Query: 668 CLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT-KK 726
+LD + ILY PL +PG + C++ Y+ DR + + ++G +F + L +
Sbjct: 88 -MLDNANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANR 146
Query: 727 VTHLLC-KFAGGLKYEAACKWG-IPSITSEWIYECVR 761
VTHL+C KF G KYE A + I + W+ +C++
Sbjct: 147 VTHLICYKFEGE-KYELAKRIKRIKLVNHRWLEDCLK 182
>UNIPROTKB|F5H8D7 [details] [associations]
symbol:XRCC1 "DNA repair protein XRCC1" species:9606 "Homo
sapiens" [GO:0000012 "single strand break repair" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR002706 Pfam:PF01834
InterPro:IPR001357 Pfam:PF00533 GO:GO:0005634 GO:GO:0003684
InterPro:IPR008979 SUPFAM:SSF49785 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GO:GO:0000012 EMBL:AC018758 EMBL:L34079
HGNC:HGNC:12828 ChiTaRS:XRCC1 IPI:IPI01010437
ProteinModelPortal:F5H8D7 SMR:F5H8D7 Ensembl:ENST00000543982
UCSC:uc010xwp.1 ArrayExpress:F5H8D7 Bgee:F5H8D7 Uniprot:F5H8D7
Length = 602
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/148 (25%), Positives = 60/148 (40%)
Query: 535 ENREERAEIHMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVF 594
+ +E + ++E L + ++ + +DEN ++E L +L F
Sbjct: 456 DTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTD---SEEHQEPPDLPVPELPDFF 512
Query: 595 RGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADA----S 650
+GK F FP D R +++++V GE+ D+ V F I P +A
Sbjct: 513 QGKHFFLYGEFPGDERRKLIRYVTAFNGEL-EDNMSDRVQFVITAQEWDPSFEEALMDNP 571
Query: 651 ETTYVSSHWIRSCLEDGCLLDVGSHILY 678
+V WI SC E LL H LY
Sbjct: 572 SLAFVRPRWIYSCNEKQKLLP---HQLY 596
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R P+E K+L G+++ ++ R E+ ++ G KY P+ T+ THLIC + T
Sbjct: 279 RAGPEELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANT 336
>UNIPROTKB|P18887 [details] [associations]
symbol:XRCC1 "DNA repair protein XRCC1" species:9606 "Homo
sapiens" [GO:0000012 "single strand break repair" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0010033 "response to
organic substance" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] Reactome:REACT_216
InterPro:IPR002706 Pfam:PF01834 InterPro:IPR001357 Pfam:PF00533
GO:GO:0005654 GO:GO:0042493 GO:GO:0006284 GO:GO:0003684
GO:GO:0001666 GO:GO:0010033 InterPro:IPR008979 SUPFAM:SSF49785
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0000012
Pathway_Interaction_DB:foxm1pathway PDB:3K75 PDB:3LQC PDBsum:3K75
PDBsum:3LQC EMBL:AC018758 EMBL:L34079 PDB:2W3O PDBsum:2W3O
EMBL:M36089 EMBL:AF512504 EMBL:CR456728 EMBL:BC023593
IPI:IPI00002564 PIR:A36353 RefSeq:NP_006288.2 UniGene:Hs.98493
PDB:1CDZ PDB:1XNA PDB:1XNT PDB:2D8M PDB:3K77 PDBsum:1CDZ
PDBsum:1XNA PDBsum:1XNT PDBsum:2D8M PDBsum:3K77
ProteinModelPortal:P18887 SMR:P18887 DIP:DIP-39067N IntAct:P18887
MINT:MINT-245471 STRING:P18887 PhosphoSite:P18887 DMDM:139820
PaxDb:P18887 PRIDE:P18887 Ensembl:ENST00000262887 GeneID:7515
KEGG:hsa:7515 CTD:7515 GeneCards:GC19M044047 H-InvDB:HIX0040090
HGNC:HGNC:12828 HPA:CAB005427 HPA:HPA006717 MIM:194360
neXtProt:NX_P18887 PharmGKB:PA369 eggNOG:NOG295271
HOVERGEN:HBG052992 InParanoid:P18887 KO:K10803 OrthoDB:EOG4C87SH
ChiTaRS:XRCC1 EvolutionaryTrace:P18887 GenomeRNAi:7515
NextBio:29407 ArrayExpress:P18887 Bgee:P18887 CleanEx:HS_XRCC1
Genevestigator:P18887 GermOnline:ENSG00000073050 Uniprot:P18887
Length = 633
Score = 97 (39.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 37/148 (25%), Positives = 60/148 (40%)
Query: 535 ENREERAEIHMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVF 594
+ +E + ++E L + ++ + +DEN ++E L +L F
Sbjct: 487 DTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTD---SEEHQEPPDLPVPELPDFF 543
Query: 595 RGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADA----S 650
+GK F FP D R +++++V GE+ D+ V F I P +A
Sbjct: 544 QGKHFFLYGEFPGDERRKLIRYVTAFNGEL-EDNMSDRVQFVITAQEWDPSFEEALMDNP 602
Query: 651 ETTYVSSHWIRSCLEDGCLLDVGSHILY 678
+V WI SC E LL H LY
Sbjct: 603 SLAFVRPRWIYSCNEKQKLLP---HQLY 627
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R P+E K+L G+++ ++ R E+ ++ G KY P+ T+ THLIC + T
Sbjct: 310 RAGPEELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANT 367
>MGI|MGI:99137 [details] [associations]
symbol:Xrcc1 "X-ray repair complementing defective repair in
Chinese hamster cells 1" species:10090 "Mus musculus" [GO:0000012
"single strand break repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IMP] InterPro:IPR002706 Pfam:PF01834
InterPro:IPR001357 MGI:MGI:99137 Pfam:PF00533 GO:GO:0005634
GO:GO:0021766 GO:GO:0042493 GO:GO:0003684 GO:GO:0006281
GO:GO:0001666 GO:GO:0010033 InterPro:IPR008979 SUPFAM:SSF49785
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0000012
PDB:3PC8 PDB:3QVG PDBsum:3PC8 PDBsum:3QVG CTD:7515 eggNOG:NOG295271
HOVERGEN:HBG052992 KO:K10803 OrthoDB:EOG4C87SH EMBL:U02887
EMBL:AK168334 EMBL:BC055900 EMBL:BC085281 IPI:IPI00118139
PIR:A54659 RefSeq:NP_033558.3 UniGene:Mm.4347 PDB:3PC6 PDBsum:3PC6
ProteinModelPortal:Q60596 SMR:Q60596 IntAct:Q60596 STRING:Q60596
PhosphoSite:Q60596 PaxDb:Q60596 PRIDE:Q60596
Ensembl:ENSMUST00000063249 GeneID:22594 KEGG:mmu:22594
UCSC:uc009fpx.2 GeneTree:ENSGT00390000004140 HOGENOM:HOG000111006
InParanoid:Q60596 OMA:YSCNEKQ EvolutionaryTrace:Q60596
NextBio:302941 Bgee:Q60596 Genevestigator:Q60596
GermOnline:ENSMUSG00000051768 Uniprot:Q60596
Length = 631
Score = 95 (38.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 38/148 (25%), Positives = 57/148 (38%)
Query: 535 ENREERAEIHMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQNMKLSTVF 594
+ +E + +RE + ++ + +DEN T T + L +L F
Sbjct: 486 DTEDELRRVAKQREQRQPPAPEENGEDPYAGSTDEN-TDSETPSE---ADLPIPELPDFF 541
Query: 595 RGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADA----S 650
GK F FP D R ++++V GE+ D + V F I P +A
Sbjct: 542 EGKHFFLYGEFPGDERRRLIRYVTAFNGEL-EDYMNERVQFVITAQEWDPNFEEALMENP 600
Query: 651 ETTYVSSHWIRSCLEDGCLLDVGSHILY 678
+V WI SC E LL H LY
Sbjct: 601 SLAFVRPRWIYSCNEKQKLLP---HQLY 625
Score = 84 (34.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 39/144 (27%), Positives = 58/144 (40%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R PQE K+L G+++ ++ R E+ ++ G KY P+ T THLIC + T
Sbjct: 310 RTGPQELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANT 367
Query: 235 IYFLNFPYTPEGDKFKVAKRWG-HIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKT 293
+ G + V K W H + R+ A L S DS S +
Sbjct: 368 PKYSQV--LGLGGRI-VRKEWVLDCHHMRRR-LPSRRYLMAGLGSSSEDEGDSHSESGED 423
Query: 294 VMGSLTKQHSQVKVIGNALSAPSS 317
L ++ Q K A + PSS
Sbjct: 424 EAPKLPQKRPQPKAKTQA-AGPSS 446
>TAIR|locus:2097149 [details] [associations]
symbol:AT3G43930 "AT3G43930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001357
EMBL:CP002686 GenomeReviews:BA000014_GR SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 HOGENOM:HOG000029538
ProtClustDB:CLSN2683293 EMBL:AY648335 IPI:IPI00532614
RefSeq:NP_189979.3 UniGene:At.50849 ProteinModelPortal:Q6DSR3
SMR:Q6DSR3 EnsemblPlants:AT3G43930.1 GeneID:823509
KEGG:ath:AT3G43930 TAIR:At3g43930 InParanoid:Q6DSR3 OMA:RISEPFS
PhylomeDB:Q6DSR3 Genevestigator:Q6DSR3 Uniprot:Q6DSR3
Length = 502
Score = 136 (52.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 35/103 (33%), Positives = 56/103 (54%)
Query: 186 PFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPE 245
PFSGL+ICVT + + RK++++ + GG+YS L CTHL+ N+ +
Sbjct: 56 PFSGLIICVTGLSKEARKQVKEATERLGGEYSALLHSLCTHLVVQ--------NY----D 103
Query: 246 GDKFKVAKRWGH---IHIINRKWFDQSMARRACLNEESYTVQD 285
G KF+ A + G ++I+ WF S+ R L+E Y V++
Sbjct: 104 GRKFEHALKHGRRETLYIVTLGWFVDSVCRNVKLSESFYAVKN 146
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 388 DLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVS 423
DL LS + + + E+R+ V+ V GG++ ++
Sbjct: 182 DLALSGYSVFIDADISEEVRRQVSQVAVEGGAKLMT 217
>FB|FBgn0003041 [details] [associations]
symbol:pbl "pebble" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0000910 "cytokinesis" evidence=NAS;IMP;TAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0007443 "Malpighian
tubule morphogenesis" evidence=IMP] [GO:0000915 "cytokinesis,
actomyosin contractile ring assembly" evidence=IMP;TAS] [GO:0005089
"Rho guanyl-nucleotide exchange factor activity" evidence=IDA;TAS]
[GO:0007422 "peripheral nervous system development" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0005096 "GTPase activator
activity" evidence=IEA] [GO:0007111 "cytokinesis after meiosis II"
evidence=IMP] [GO:0007110 "cytokinesis after meiosis I"
evidence=IMP] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0007509 "mesoderm migration involved in gastrulation"
evidence=IMP] [GO:0008078 "mesodermal cell migration" evidence=IMP]
[GO:0050770 "regulation of axonogenesis" evidence=IGI] [GO:0045184
"establishment of protein localization" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0032154 "cleavage
furrow" evidence=IDA] [GO:0030676 "Rac guanyl-nucleotide exchange
factor activity" evidence=IDA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IGI] [GO:0005938 "cell cortex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0045792
"negative regulation of cell size" evidence=IMP] [GO:0030215
"semaphorin receptor binding" evidence=IPI] [GO:0007415
"defasciculation of motor neuron axon" evidence=IMP]
InterPro:IPR000219 InterPro:IPR026817 Pfam:PF00621 PROSITE:PS50010
SMART:SM00325 InterPro:IPR001357 GO:GO:0005938 GO:GO:0005634
EMBL:AE014296 GO:GO:0051225 GO:GO:0008360 GO:GO:0005096
GO:GO:0043547 GO:GO:0007155 GO:GO:0007422 GO:GO:0045184
Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0050770 GO:GO:0000902
GO:GO:0000915 GO:GO:0045666 GO:GO:0032314 GO:GO:0030676
GO:GO:0032154 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GO:GO:0008078 GO:GO:0007110 GO:GO:0007111 GO:GO:0007443
PANTHER:PTHR16777:SF0 GeneTree:ENSGT00700000104481 UniGene:Dm.2712
GeneID:38879 KEGG:dme:Dmel_CG8114 CTD:38879 FlyBase:FBgn0003041
GenomeRNAi:38879 NextBio:810818 RefSeq:NP_523965.2
ProteinModelPortal:Q8IQ97 SMR:Q8IQ97 STRING:Q8IQ97 PRIDE:Q8IQ97
EnsemblMetazoa:FBtr0076772 UCSC:CG8114-RB InParanoid:Q8IQ97
OMA:ECSHVVM PhylomeDB:Q8IQ97 ArrayExpress:Q8IQ97 Bgee:Q8IQ97
Uniprot:Q8IQ97
Length = 1311
Score = 144 (55.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 44/188 (23%), Positives = 86/188 (45%)
Query: 52 FHVISSSDHEKFEDL-RAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASG 109
F+V+ + FE + + K C +LGP + A+ + L + AM GV +G
Sbjct: 65 FYVLDDFEGASFEAIHKQKEC-ILGPPALKYAAEMKQTLGQNSRPIYNYAMRGVVTCFTG 123
Query: 110 F-DVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
DE K+ L+ +MGG ++ + +I + KY++A + +V W++
Sbjct: 124 IRKKDELTKLVNLIHSMGGCIKKDLNTKTTHLICNHSGGEKYQYA-KTFRLTVVRPAWVF 182
Query: 169 QCWNEHRVVP----QESY----KVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
W + + QE++ ++ F G IC P +E + M ++++NGG +
Sbjct: 183 AAWADRNSLEFDATQENFTKTHRLKAFEGQKICFFGFPVEEHQHMVDVLLENGGVCAELD 242
Query: 221 TKKCTHLI 228
+C+H++
Sbjct: 243 DPECSHVV 250
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 257 HIHIINRKWFDQSMARRACLNEESYTVQD 285
H HI+ WF ++ + NE Y D
Sbjct: 724 HTHILKSDWFWYTI-QNGYANEMDYLFGD 751
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 286 SSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMATESN 323
SS SS ++ + HS V+VI +P T N
Sbjct: 663 SSSSSSSPILSTSIAVHSSVQVI----KSPEESTTRRN 696
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 891 SDVAAVIEDLVEQTSKVQDLKSPERS 916
S + ++ + S VQ +KSPE S
Sbjct: 666 SSSSPILSTSIAVHSSVQVIKSPEES 691
>RGD|619823 [details] [associations]
symbol:Xrcc1 "X-ray repair complementing defective repair in
Chinese hamster cells 1" species:10116 "Rattus norvegicus"
[GO:0000012 "single strand break repair" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEP] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=ISO]
[GO:0006284 "base-excision repair" evidence=TAS] [GO:0006974
"response to DNA damage stimulus" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0021766
"hippocampus development" evidence=IEA;ISO] [GO:0042493 "response
to drug" evidence=IEP] InterPro:IPR002706 Pfam:PF01834
InterPro:IPR001357 Pfam:PF00533 RGD:619823 GO:GO:0005634
GO:GO:0042493 GO:GO:0006284 GO:GO:0003684 GO:GO:0001666
GO:GO:0010033 InterPro:IPR008979 SUPFAM:SSF49785 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0000012 CTD:7515
eggNOG:NOG295271 HOVERGEN:HBG052992 KO:K10803 OrthoDB:EOG4C87SH
HOGENOM:HOG000111006 EMBL:AF290895 EMBL:BC070894 IPI:IPI00421930
RefSeq:NP_445887.1 UniGene:Rn.13754 ProteinModelPortal:Q9ESZ0
SMR:Q9ESZ0 STRING:Q9ESZ0 PRIDE:Q9ESZ0 GeneID:84495 KEGG:rno:84495
UCSC:RGD:619823 InParanoid:Q9ESZ0 NextBio:617067
ArrayExpress:Q9ESZ0 Genevestigator:Q9ESZ0
GermOnline:ENSRNOG00000019915 Uniprot:Q9ESZ0
Length = 631
Score = 93 (37.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 36/149 (24%), Positives = 60/149 (40%)
Query: 535 ENREERAEIHMKRESSLEATAVPSQQNLLSALSDENK-TQLRTKEDFRVQSLQNMKLSTV 593
+ +E + +RE + ++ + +DEN ++ ++ D + L +
Sbjct: 486 DTEDELRRVAKQREQRQPPAPEENGEDPYAGSTDENTDSEAPSEADLPIPELPDF----- 540
Query: 594 FRGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADA---- 649
F+GK F FP D R +++++V GE+ D V F I P +A
Sbjct: 541 FQGKHFFLYGEFPGDERRKLIRYVTAFNGEL-EDYMSDRVQFVITAQEWDPNFEEALMEN 599
Query: 650 SETTYVSSHWIRSCLEDGCLLDVGSHILY 678
+V WI SC E LL H LY
Sbjct: 600 PSLAFVRPRWIYSCNEKQKLLP---HQLY 625
Score = 83 (34.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R PQE K+L G+++ ++ R E+ ++ G KY P+ T THLIC + T
Sbjct: 310 RAGPQELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANT 367
>UNIPROTKB|Q9ESZ0 [details] [associations]
symbol:Xrcc1 "DNA repair protein XRCC1" species:10116
"Rattus norvegicus" [GO:0000012 "single strand break repair"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR002706 Pfam:PF01834 InterPro:IPR001357 Pfam:PF00533
RGD:619823 GO:GO:0005634 GO:GO:0042493 GO:GO:0006284 GO:GO:0003684
GO:GO:0001666 GO:GO:0010033 InterPro:IPR008979 SUPFAM:SSF49785
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0000012
CTD:7515 eggNOG:NOG295271 HOVERGEN:HBG052992 KO:K10803
OrthoDB:EOG4C87SH HOGENOM:HOG000111006 EMBL:AF290895 EMBL:BC070894
IPI:IPI00421930 RefSeq:NP_445887.1 UniGene:Rn.13754
ProteinModelPortal:Q9ESZ0 SMR:Q9ESZ0 STRING:Q9ESZ0 PRIDE:Q9ESZ0
GeneID:84495 KEGG:rno:84495 UCSC:RGD:619823 InParanoid:Q9ESZ0
NextBio:617067 ArrayExpress:Q9ESZ0 Genevestigator:Q9ESZ0
GermOnline:ENSRNOG00000019915 Uniprot:Q9ESZ0
Length = 631
Score = 93 (37.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 36/149 (24%), Positives = 60/149 (40%)
Query: 535 ENREERAEIHMKRESSLEATAVPSQQNLLSALSDENK-TQLRTKEDFRVQSLQNMKLSTV 593
+ +E + +RE + ++ + +DEN ++ ++ D + L +
Sbjct: 486 DTEDELRRVAKQREQRQPPAPEENGEDPYAGSTDENTDSEAPSEADLPIPELPDF----- 540
Query: 594 FRGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADA---- 649
F+GK F FP D R +++++V GE+ D V F I P +A
Sbjct: 541 FQGKHFFLYGEFPGDERRKLIRYVTAFNGEL-EDYMSDRVQFVITAQEWDPNFEEALMEN 599
Query: 650 SETTYVSSHWIRSCLEDGCLLDVGSHILY 678
+V WI SC E LL H LY
Sbjct: 600 PSLAFVRPRWIYSCNEKQKLLP---HQLY 625
Score = 83 (34.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R PQE K+L G+++ ++ R E+ ++ G KY P+ T THLIC + T
Sbjct: 310 RAGPQELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANT 367
>WB|WBGene00002297 [details] [associations]
symbol:ect-2 species:6239 "Caenorhabditis elegans"
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0032970 "regulation of actin filament-based process"
evidence=IGI;IMP] [GO:0045167 "asymmetric protein localization
involved in cell fate determination" evidence=IMP] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0005938
"cell cortex" evidence=IDA] InterPro:IPR000219 InterPro:IPR026817
Pfam:PF00621 PROSITE:PS50010 SMART:SM00325 InterPro:IPR001357
GO:GO:0005938 GO:GO:0005634 GO:GO:0045167 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0006915 GO:GO:0016477
GO:GO:0002119 GO:GO:0005096 GO:GO:0043547 GO:GO:0040017
GO:GO:0032880 GO:GO:0000910 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 GO:GO:0040035 GO:GO:0000902 GO:GO:0045666
GO:GO:0040015 GO:GO:0035023 GO:GO:0040002 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0032970 PANTHER:PTHR16777:SF0
GeneTree:ENSGT00700000104481 EMBL:Z46795 UniGene:Cel.14340
GeneID:174658 KEGG:cel:CELE_T19E10.1 UCSC:T19E10.1b CTD:174658
HOGENOM:HOG000016790 NextBio:884946 PIR:T25008 RefSeq:NP_496318.1
ProteinModelPortal:Q9U364 SMR:Q9U364 IntAct:Q9U364 STRING:Q9U364
PRIDE:Q9U364 EnsemblMetazoa:T19E10.1b WormBase:T19E10.1b
InParanoid:Q9U364 OMA:CKAKESN ArrayExpress:Q9U364 Uniprot:Q9U364
Length = 932
Score = 120 (47.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 53/237 (22%), Positives = 107/237 (45%)
Query: 96 CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALN 155
C L D +A+ +V K ++ LV MGG ++ K T+ + V + + AK + +++
Sbjct: 116 CELMKDVTMKLAA--EVPNKRELVDLVHYMGGSVR-KDTVSRTNVFIAAKVEAKVQ-SIS 171
Query: 156 ILKKPIVTVNWLYQCWNEHR-------VVP--QESYKVLPFSGLMICVTRIPADERKEME 206
++ P + +W+ +CW +HR + P + +++ F GL + E +M
Sbjct: 172 LVGVPTMRADWVTECW-KHRDDSYFDVMEPCFVDKHRLGVFEGLSLFFHGFKQTEIDDML 230
Query: 207 KLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFK-VAKRWGHIHIINRKW 265
+ + GGK +P T TH++ Y P+ D+ + +A +H+ ++W
Sbjct: 231 RSLENTGGKLAPSPTL-ATHVV-------------YNPDNDEVETLAVSSNQVHV-TKEW 275
Query: 266 FDQSMARRACLNEESYTVQDSSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMATES 322
F S+ R C E+++ + + K S++ IG +L + +S + S
Sbjct: 276 FWVSLHRGCCAIEDNFALPTGKLHRKPLESSSVSSP------IGKSLRSQNSRSLSS 326
Score = 57 (25.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 643 IPKSADASETTYVSSHWIRSCLEDG-CLLDVGSHILYS----PLHCQTPLPGFERFRFCV 697
I KS + + +SS +R C +G L++ +YS C++P +R R C+
Sbjct: 312 IGKSLRSQNSRSLSS--MRDCSVEGPTSLNMTPDYIYSNDDVENSCKSPRQPSKRLRVCM 369
Query: 698 SQYE-EKDRVLLRNLCFVLGAKFMEKLTKKVTH 729
E EK+ + L L KF E L +++H
Sbjct: 370 EMVETEKNYLSLLKLV----VKFKEALECEISH 398
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1017 1017 0.00080 123 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 631 (67 KB)
Total size of DFA: 500 KB (2231 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 98.51u 0.12s 98.63t Elapsed: 00:00:06
Total cpu time: 98.54u 0.12s 98.66t Elapsed: 00:00:06
Start: Mon May 20 18:28:01 2013 End: Mon May 20 18:28:07 2013