BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001761
(1017 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q800K6|TOB1A_XENLA DNA topoisomerase 2-binding protein 1-A OS=Xenopus laevis
GN=topbp1-A PE=1 SV=2
Length = 1513
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 242/994 (24%), Positives = 406/994 (40%), Gaps = 186/994 (18%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F L+ GC ++GPQ V+ C + R +P+ + +AM V + + D + + +
Sbjct: 68 FSHLKKLGCRIVGPQVVIFCMENQRRVPRAEYPVYNMAMADVTISCTSLDKETREDVHHY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNE--HRV--- 176
V MGG + + V+ +I V + KY A + L+KPI+ +W+ + W + R+
Sbjct: 128 VQIMGGCVYRDLNVSVTHLIAGEVGSKKYLVAAS-LEKPILLPSWVKELWEKSNQRIIRY 186
Query: 177 --VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL-TKKCTHLICDISF 233
V Y F G ICVT + + +RKE+++L +GG+Y+ +L + THLI +
Sbjct: 187 SDVNMTEYLCPIFRGCTICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEA- 245
Query: 234 TIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKT 293
+G K++ A++W ++H I+ +WF S+ + C +E Y ++ +S + K+
Sbjct: 246 -----------KGQKYECARKW-NVHCISVQWFFDSIEKGFCQDETMYKIEPAS--TIKS 291
Query: 294 VMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAP 353
V + T K L S ++ +S SC E+ F+ +M S +D P
Sbjct: 292 VPDTSTPTGGNSKPNSRTLYDVSQISN----ISTSCVN------ESAFNSAMASR-LDPP 340
Query: 354 VVSKDGAIEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMV 413
+ + N D+ S + D L CRI L GF ++ KL ++
Sbjct: 341 ADTLE--------------NLDI-----SSLQAPDDLLDGCRIYLCGFGGRKLDKLRKLI 381
Query: 414 RRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDC----DRERR 469
GGG R+ +THI+VG E K+ + + VK WL D +
Sbjct: 382 NNGGGVRFNQLTGDVTHIIVGETDEELKQFLNKTQHRPYVLTVK--WLLDSFAKGHLQPE 439
Query: 470 EISILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRSTNSGIGM 529
EI + ++ P E A NL K SS R
Sbjct: 440 EIYFHSSYQQTEMPSPFEPAI----------NLTANKMSSTRD----------------- 472
Query: 530 PLSLEENREERAEI---HMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQ 586
PL+ N + ++ + + S+L P N S +Q+ ED + Q
Sbjct: 473 PLNHTRNHQADEDLLSQYTENNSTLIEDEHPKTSNTNSI------SQMSMHEDMTTCTSQ 526
Query: 587 N--MKLSTVFRGKIFRFSN----SFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECH 640
+ ST+ G +F F E+ A I+ + + G+V++ + I +
Sbjct: 527 SGLADTSTIIEGGLFSRKQFMVLGFLEEDEACIIDIIKKSAGKVLSSQKR-----AIADY 581
Query: 641 GVIPKSADASETTY---VSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCV 697
V+P E+T V++ W+ C+E LLD S+ L++P+ L G R CV
Sbjct: 582 AVVPLLGCEVESTVGEVVTNAWLGMCIEQEKLLDPHSNALFTPVPF---LEGSTPLRECV 638
Query: 698 ---SQYEEKDRVLLRNLCFVLGAKFMEKLTKKV---------THLLCKFAGGLKYEAACK 745
SQ+ +R L L +LGAK E +K THL+ K A G KYEAA K
Sbjct: 639 LSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMFASTHLVLKDAEGSKYEAAKK 698
Query: 746 WGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGLCTVSQFPMQSVQMSSADEPS 805
W +P++T W+ +C R D + V D++ + + P Q++++ S P
Sbjct: 699 WNLPAVTMNWLLQCARTGRKADEDSYLVDNVPEEDKDESFISQTYKP-QAIRL-SMHAPC 756
Query: 806 QFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEANQT--SAHNKRARISEDEDH--DTLP 861
N L ++ + D+ R + +A Q+ S HNK + S E P
Sbjct: 757 HLENHPEALTKAAVTPL-----DMNR---FKSKAFQSVISQHNKNPQTSGGESKVLQREP 808
Query: 862 GVHLKDPHR-------------------------STNYNGDSMSKDNGEVPHIGSDVAAV 896
+HL P + N + S EV IG ++
Sbjct: 809 SLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGGPNQKNRTQSTPLSEV--IGRNLQLA 866
Query: 897 IEDLVEQTSKVQ---DLKSPERSECDKSLFPSDCSV-----LGQNHTDFNSV---IGLSR 945
I + QT+ V LK+ E+ E D S + + L + + N + +G
Sbjct: 867 IANSTRQTAAVTASPQLKAAEKKEFDNSKLLINVVICVSKKLIKKQGELNGIAASLGAEY 926
Query: 946 QWS-NRTL-------KKNDIQNPFNSKGVRSGIY 971
+W + ++ ++ND+ + S RSGIY
Sbjct: 927 RWCFDESVTHFIYHGRQNDMSREYKSVKERSGIY 960
>sp|Q92547|TOPB1_HUMAN DNA topoisomerase 2-binding protein 1 OS=Homo sapiens GN=TOPBP1
PE=1 SV=3
Length = 1522
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 183/746 (24%), Positives = 326/746 (43%), Gaps = 94/746 (12%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F+ L+ GC ++GPQ V+ C R +P+ + M V + + + +++ ++ K
Sbjct: 68 FDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEKREEVHKY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCW---NEHRV-- 176
V MGG + + V+ +I V + KY A N LKKPI+ +W+ W E ++
Sbjct: 128 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAAN-LKKPILLPSWIKTLWEKSQEKKITR 186
Query: 177 ---VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL-TKKCTHLICDIS 232
+ E +K F G +ICVT + +RKE+++L V++GG+Y +L +CTHLI
Sbjct: 187 YTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQ-- 244
Query: 233 FTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKK 292
P+G K++ AKRW ++H + +WF S+ + C +E Y + K
Sbjct: 245 ----------EPKGQKYECAKRW-NVHCVTTQWFFDSIEKGFCQDESIYKTEPRP--EAK 291
Query: 293 TVMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDA 352
T+ S T SQ+ I + +++ SN+ +++ + ++ + S+ P++
Sbjct: 292 TMPNSSTPT-SQINTIDS-----RTLSDVSNISNINASCVSESICNSLNSKLEPTL---- 341
Query: 353 PVVSKDGAIEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNM 412
N N DV + DL L CRI L GF ++ KL +
Sbjct: 342 ----------------ENLENLDVSAFQAPE----DL-LDGCRIYLCGFSGRKLDKLRRL 380
Query: 413 VRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDCDRERREIS 472
+ GGG R+ N +TH++VG + K+ A VV + WL +C + +S
Sbjct: 381 INSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRP--HVVGAKWLLECFSKGYMLS 438
Query: 473 ILQR-HVAYDLL-LPKESAWSTKGAPLCTNNLNQGKES---SVRHSLSSDEMLRSTNSGI 527
H Y + +P +K A L N + K+ S +H + +++L +G
Sbjct: 439 EEPYIHANYQPVEIPVSHKPESKAALLKKKNSSFSKKDFAPSEKHEQADEDLLSQYENGS 498
Query: 528 GMPLSLEENREERAEIHMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQN 587
+ A+ R + A P + +L +EN++ + V +
Sbjct: 499 STVV--------EAKTSEARPFNDSTHAEPLNDSTHISLQEENQSSV----SHCVPDVST 546
Query: 588 MKLSTVFRGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPK-- 645
+ +F K F F + + I + + G++++ ++ T+ + V+P
Sbjct: 547 ITEEGLFSQKSF-LVLGFSNENESNIANIIKENAGKIMSLLSR-----TVADYAVVPLLG 600
Query: 646 -SADASETTYVSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKD 704
+A+ V++ W+ +C++ L D S+ L++P+ T + E SQ +
Sbjct: 601 CEVEATVGEVVTNTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAE 660
Query: 705 RVLLRNLCFVLGAKFMEKLTKKV---------THLLCKFAGGLKYEAACKWGIPSITSEW 755
+ L L +LGA E +K THL+ K GG KYEAA KW +P++T W
Sbjct: 661 KESLTFLANLLGASVQEYFVRKSNAKKGMFASTHLILKERGGSKYEAAKKWNLPAVTIAW 720
Query: 756 IYECVRQNEVVSLDHFSPKEVTTHDR 781
+ E R + HF + T +R
Sbjct: 721 LLETARTGKRADESHFLIENSTKEER 746
>sp|Q7ZZY3|TOB1B_XENLA DNA topoisomerase 2-binding protein 1-B OS=Xenopus laevis
GN=topbp1-B PE=2 SV=1
Length = 1513
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 241/994 (24%), Positives = 403/994 (40%), Gaps = 186/994 (18%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F L+ GC ++GPQ V+ C + R +P+ + +AM V + + D + + +
Sbjct: 68 FSHLKKLGCRIVGPQVVIFCMESQRRVPRAEYPVYNMAMADVTISCTSLDKETREDVHHY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNE--HRV--- 176
V MGG + + V+ +I V + KY A + L+KPI+ +W+ + W + R+
Sbjct: 128 VQIMGGCVYRDLNVSVTHLIAGEVGSNKYLVAAS-LEKPILLPSWVKELWEKSNQRIIRY 186
Query: 177 --VPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL-TKKCTHLICDISF 233
V Y F G ICVT + + +RKE+++L +GG+Y+ +L + THLI +
Sbjct: 187 SDVNMTEYLCPIFRGCTICVTGLSSLDRKEVQRLTALHGGEYTGQLKMNESTHLIVQEA- 245
Query: 234 TIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKKT 293
+G K++ A++W +H I+ +WF S+ + C +E Y ++ +S + K+
Sbjct: 246 -----------KGQKYECARKW-IVHCISVQWFFDSIEKGFCQDETMYKIEPAS--TIKS 291
Query: 294 VMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAP 353
V + T K L S ++ +S SC E+ F+ +M S +D P
Sbjct: 292 VPDTSTPTGGNSKPNSRTLYDVSQISN----ISTSCVN------ESAFNSAMASR-LDPP 340
Query: 354 VVSKDGAIEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMV 413
+ + N D+ S + D L CRI L GF ++ KL ++
Sbjct: 341 ADTLE--------------NLDI-----SSLQAPDDLLDGCRIYLCGFGGRKLDKLRKLI 381
Query: 414 RRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDC----DRERR 469
GGG R+ +THI+VG E K+ + + VK WL D +
Sbjct: 382 NNGGGVRFNQLTGDVTHIIVGETDEELKQFLNKTQHRPYVLTVK--WLLDSFAKGHLQPE 439
Query: 470 EISILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQGKESSVRHSLSSDEMLRSTNSGIGM 529
EI + ++ P E A NL K SS R
Sbjct: 440 EIYFHSSYQQTEMPSPFEPAI----------NLTANKMSSTRD----------------- 472
Query: 530 PLSLEENREERAEI---HMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQSLQ 586
PL+ N + ++ + + S+L P N S +Q+ ED + Q
Sbjct: 473 PLNHTRNHQADEDLLSQYTENNSTLIEDEHPKTSNTNSI------SQITCSEDLTTCTSQ 526
Query: 587 N--MKLSTVFRGKIFRFSN----SFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECH 640
+ ST+ G +F F E+ A I+ + G+V++ + I +
Sbjct: 527 SGLADPSTIIEGGLFSRKQFMVLGFLEEDEACIIDIRKKSAGKVLSSQKR-----AIADY 581
Query: 641 GVIPKSADASETTY---VSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCV 697
V+P E+T V++ W+ C+E LLD S+ L++P+ L G R CV
Sbjct: 582 AVVPLLGCEVESTVGEVVTNAWLGMCIEQEKLLDPHSNALFTPVPF---LEGSTPLRECV 638
Query: 698 ---SQYEEKDRVLLRNLCFVLGAKFMEKLTKKV---------THLLCKFAGGLKYEAACK 745
SQ+ +R L L +LGAK E +K +HL K A G KYEAA K
Sbjct: 639 LSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMFARSHLDLKDAEGSKYEAAKK 698
Query: 746 WGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGLCTVSQFPMQSVQMSSADEPS 805
W +P++T W+ +C R + D + V D++ + P Q++++ S P
Sbjct: 699 WNLPAVTMNWLLQCARTGKKADEDSYLVDNVPEEDKDESFINQTYKP-QAIRL-SMHAPC 756
Query: 806 QFINPLGGLQSSSPQTMVHKIDDITRSDNLRDEANQT--SAHNKRARISEDEDH--DTLP 861
N L ++ + D+ R + +A Q+ S HNK + S E P
Sbjct: 757 HLENHPEALTKAAVTPL-----DMNR---FKSKACQSVISQHNKNPQTSGGESKVLQREP 808
Query: 862 GVHLKDPHR-------------------------STNYNGDSMSKDNGEVPHIGSDVAAV 896
+HL P + N + S EV IG ++
Sbjct: 809 SLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGGPNQKNRTQSTPLSEV--IGRNLQLA 866
Query: 897 IEDLVEQTSKVQ---DLKSPERSECDKSLFPSDCSV-----LGQNHTDFNSV---IGLSR 945
I + QT+ V LK+ E+ E D S + + L + + N + +G
Sbjct: 867 IANSTRQTAAVTASPQLKAAEKKEFDNSKLLINVVICVSKKLIKKQGELNGIAASLGAEY 926
Query: 946 QWS-NRTL-------KKNDIQNPFNSKGVRSGIY 971
+W + ++ ++ND+ + S RSGIY
Sbjct: 927 RWCFDESVTHFIYHGRQNDMSREYKSVKERSGIY 960
>sp|Q6ZQF0|TOPB1_MOUSE DNA topoisomerase 2-binding protein 1 OS=Mus musculus GN=Topbp1
PE=1 SV=2
Length = 1515
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 181/746 (24%), Positives = 320/746 (42%), Gaps = 111/746 (14%)
Query: 63 FEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTCC-LAMDGVKVIASGFDVDEKFKIEKL 121
F+ L+ GC ++GPQ V C + + +P+ + M V V + D D++ ++ K
Sbjct: 68 FDHLKQLGCRIVGPQVVTFCMRHQQCVPRAEHPVYNMIMSDVTVSCTSLDKDKREEVHKY 127
Query: 122 VTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCW--------NE 173
V MGG + + V+ +I V + KY A N LKKPI+ +W+ W +
Sbjct: 128 VQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAAN-LKKPILLPSWIKTLWEKSQEKKITK 186
Query: 174 HRVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL-TKKCTHLICDIS 232
+ V E +K F G +ICVT + RK +++L ++GG+Y +L +CTHLI
Sbjct: 187 YTDVNMEDFKCPIFLGCIICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTHLIVQ-- 244
Query: 233 FTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDSSVSSKK 292
P+G K++ A+RW ++H + +WF S+ + C +E Y ++
Sbjct: 245 ----------EPKGQKYECARRW-NVHCVTLQWFHDSIEKGFCQDESIY-------KAET 286
Query: 293 TVMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDA 352
V + S NA S ++A S++ +++ + + +T S+ S+
Sbjct: 287 RVEAKMVPDTSTPTAQSNAES--HTLADVSHISNINGSCVNETMFGSTTSKLECSL---- 340
Query: 353 PVVSKDGAIEAPTAQTRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNM 412
N N D+ + + DL L CRI L GF ++ KL +
Sbjct: 341 ----------------ENLENLDISMFQAPE----DL-LDGCRIYLCGFSGRKLDKLRRL 379
Query: 413 VRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASLGIIQVVKSTWLEDCDRERREIS 472
+ GGG R+ N +TH++VG + D R+ S +S VV + WL +C
Sbjct: 380 INSGGGVRFNQLNEDVTHVIVGDYDD-DVRQFWSKSS-HRPHVVGAKWLLEC-------- 429
Query: 473 ILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQ-GKESSV--------RHSLSSDEMLRST 523
+LP+ES T P +Q G +++V + +L E L+
Sbjct: 430 -----FTKGYILPEESYIHTNYQPAGIAVSDQPGNQTAVLDKSGSFSKSALVPAERLQQA 484
Query: 524 NSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQNLLSALSDENKTQLRTKEDFRVQ 583
+ L + ++ + K +LE P + D++ T + +E+ +
Sbjct: 485 DED----LLAQYGNDDSTMVEAKLSEALEPEVGPCPGSAHREPCDDS-THISVQEENK-S 538
Query: 584 SLQNMKL--STVFRGKIFRFSN----SFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTI 637
S+ + L STV +F + F + + IV + + G++V+ ++ +
Sbjct: 539 SVSHCILDDSTVREEGLFSQKSFLVLGFSVENKCNIVDIIREHAGKIVSLPSR-----IV 593
Query: 638 ECHGVIPK---SADASETTYVSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFR 694
+ V+P D + V++ W+ +C+++ L+D S+ L++P+ + + E
Sbjct: 594 ADYAVVPLLGCEVDVTVGEVVTNTWLVTCIDNQTLVDPKSNPLFTPVSVMSGVTPLEDCV 653
Query: 695 FCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKV---------THLLCKFAGGLKYEAACK 745
SQ +R L L LGA E +K THL+ K G KYEAA K
Sbjct: 654 ISFSQCVGAERDSLVFLANHLGASVQEFFVRKANAKKGMLASTHLIVKEPTGSKYEAAKK 713
Query: 746 WGIPSITSEWIYECVRQNEVVSLDHF 771
W +P++ W+ E R + +HF
Sbjct: 714 WSLPAVNISWLLETARIGKRADENHF 739
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 84/441 (19%), Positives = 158/441 (35%), Gaps = 97/441 (21%)
Query: 109 GFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
GF V+ K I ++ G + + + V+ V +L + +++ +VT WL
Sbjct: 565 GFSVENKCNIVDIIREHAGKIVSLPSRIVADYAVVPLLGCE----VDVTVGEVVTNTWLV 620
Query: 169 QCWNEHRVVPQESYK----------VLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSP 218
C + +V +S V P +I ++ ER + L G
Sbjct: 621 TCIDNQTLVDPKSNPLFTPVSVMSGVTPLEDCVISFSQCVGAERDSLVFLANHLGASVQE 680
Query: 219 ELTKKC---------THLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQS 269
+K THLI P G K++ AK+W + +N W ++
Sbjct: 681 FFVRKANAKKGMLASTHLIVK------------EPTGSKYEAAKKWS-LPAVNISWLLET 727
Query: 270 MARRACLNEESYTVQDSSVSSKKTVMGSLTKQHSQVKVIGNALSAPSSMATESNLLSVSC 329
AR +E++ + D++ ++ + + S + A + + + +
Sbjct: 728 -ARIGKRADENHFLVDNAPKQEQVLETKIPNGVSSNPDLPAHPDAHLEIHRKKAVTPLDM 786
Query: 330 TGFADQDLEATFSQSM----------------PSMYMDAP--VVSKD------------- 358
F + A SQ PS+++D P +SKD
Sbjct: 787 NRFQSRAFRAVISQQRGQDPTFPPVRQPLTKEPSLHLDTPSKFLSKDKLFKPSFDVTDAL 846
Query: 359 GAIEAPTAQTRNES-----------NSDVCVANDSQSEDN--------DLYLS------- 392
A+E P A ++ N V +AN S++ D+ +L
Sbjct: 847 AALETPNAASQKRKLSSPLSEVIVRNLTVALANSSRNTDSHSASPQLKGAHLEEEETRKP 906
Query: 393 -DCRIVLVGFEASEMRKLVNMVRRGGGSRYV-SYNNGLTHIVVGTLSEADKREVRSLASL 450
D +V V + S+ + +N V G+ Y S++ +TH + + RE +S
Sbjct: 907 LDSVVVCVSKKLSKKQSELNGVAASLGAEYRWSFDETVTHFIYQGRANDSNREYKSAKER 966
Query: 451 GIIQVVKSTWLEDCDRERREI 471
G + +V WL +C +E + +
Sbjct: 967 G-VHIVSEHWLLECAQEYKHL 986
>sp|Q07139|ECT2_MOUSE Protein ECT2 OS=Mus musculus GN=Ect2 PE=1 SV=2
Length = 913
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 51 DFHVISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVI 106
+ V++ + F DL C ++GP +L+CA+ LP F+C C +M + +
Sbjct: 126 NIFVVTDFQNSVFNDLYKADCRIVGPPVILNCAQRGEPLP---FSCRPLYCTSMLNLVLC 182
Query: 107 ASGFDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVN 165
+GF E+ K+ LV MGGV++ + V+ ++ K++ A++ L PI+
Sbjct: 183 FTGFRKKEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGEKFRVAVS-LGTPIMKPE 241
Query: 166 WLYQCW---NEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYS 217
W+Y+ W NE + +KV PF ++ +E+ ME++ GG Y
Sbjct: 242 WIYKAWERRNEQCFCAAVDDFRNEFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYL 301
Query: 218 PELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKR--WGHIHIINR 263
P ++CTHLI + + + P+ P F V + WG I + R
Sbjct: 302 PVGDERCTHLIVEEN---TVKDLPFEPSKKLFVVKQEWFWGSIQMDAR 346
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 680 PLHCQTPLPGFERFRFCVSQYEEKDRVL-LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGL 738
PL+C + L C + + +K+ ++ L L +G ++ KVTHL+ G
Sbjct: 170 PLYCTSML----NLVLCFTGFRKKEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGE 225
Query: 739 KYEAACKWGIPSITSEWIYEC-VRQNE 764
K+ A G P + EWIY+ R+NE
Sbjct: 226 KFRVAVSLGTPIMKPEWIYKAWERRNE 252
>sp|Q9H8V3|ECT2_HUMAN Protein ECT2 OS=Homo sapiens GN=ECT2 PE=1 SV=4
Length = 914
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 54 VISSSDHEKFEDLRAKGCNLLGPQCVLSCAKENRALPKQGFTC----CLAMDGVKVIASG 109
V++ F DL C ++GP VL+C+++ LP F+C C +M + + +G
Sbjct: 129 VVTDFQDSVFNDLYKADCRVIGPPVVLNCSQKGEPLP---FSCRPLYCTSMMNLVLCFTG 185
Query: 110 FDVDEKF-KIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLY 168
F E+ ++ LV MGGV++ V+ ++ K++ A++ L PI+ W+Y
Sbjct: 186 FRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVS-LGTPIMKPEWIY 244
Query: 169 QCW---NEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPEL 220
+ W NE + +KV PF ++ +E+ ME++ GGKY P
Sbjct: 245 KAWERRNEQDFYAAVDDFRNEFKVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLG 304
Query: 221 TKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEES 280
++CTHL+ + + + P+ P ++++ ++WF S+ A E
Sbjct: 305 DERCTHLVVEENIV---KDLPFEPS----------KKLYVVKQEWFWGSIQMDARAGETM 351
Query: 281 YTVQDSSVSS-KKTV-MGSLTKQHSQVK 306
Y + ++ KK+V M SL +S K
Sbjct: 352 YLYEKANTPELKKSVSMLSLNTPNSNRK 379
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 680 PLHCQTPLPGFERFRFCVSQYEEKDRVL-LRNLCFVLGAKFMEKLTKKVTHLLCKFAGGL 738
PL+C + + C + + +K+ ++ L L +G + KVTHL+ G
Sbjct: 170 PLYCTSMM----NLVLCFTGFRKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGE 225
Query: 739 KYEAACKWGIPSITSEWIYEC-VRQNE 764
K+ A G P + EWIY+ R+NE
Sbjct: 226 KFRVAVSLGTPIMKPEWIYKAWERRNE 252
>sp|P32372|RAD4_SCHPO S-M checkpoint control protein rad4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rad4 PE=1 SV=2
Length = 648
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 90 PKQGFTCCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAK 149
P +GF C + D+ ++ +I T +G ++ T DV+ +I + K
Sbjct: 6 PLKGFVIC---------CTSIDLKQRTEISTKATKLGAAYRSDFTKDVTHLIAGDFDTPK 56
Query: 150 YKWALNILKKP---IVTVNW---LYQCW------NEHRVVPQESYKVLPFSGLMICVTRI 197
YK+A +P I++ W LY+ W ++ +V + L +C+T I
Sbjct: 57 YKFAAK--SRPDIKIMSSEWIPVLYESWVQGEDLDDGLLVDKHFLPTL--FKCRVCLTNI 112
Query: 198 PADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGH 257
ER +E ++++GG + P+LT+ THLI S G K++ A +W
Sbjct: 113 GQPERSRIENYVLKHGGTFCPDLTRDVTHLIAGTS------------SGRKYEYALKW-K 159
Query: 258 IHIINRKWFDQSMARRACLNEESYTV 283
I+++ +W QS+ R A L + + +
Sbjct: 160 INVVCVEWLWQSIQRNAVLEPQYFQL 185
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 664 LEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKL 723
L+DG L+D H L + C R C++ + +R + N G F L
Sbjct: 88 LDDGLLVD--KHFLPTLFKC----------RVCLTNIGQPERSRIENYVLKHGGTFCPDL 135
Query: 724 TKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHF 771
T+ VTHL+ + G KYE A KW I + EW+++ +++N V+ +F
Sbjct: 136 TRDVTHLIAGTSSGRKYEYALKWKINVVCVEWLWQSIQRNAVLEPQYF 183
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 148/401 (36%), Gaps = 36/401 (8%)
Query: 391 LSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVRSLASL 450
L CR+ L E ++ N V + GG+ +TH++ GT S K E A
Sbjct: 102 LFKCRVCLTNIGQPERSRIENYVLKHGGTFCPDLTRDVTHLIAGT-SSGRKYE---YALK 157
Query: 451 GIIQVVKSTWLEDCDRERREISILQRHVAYDLLLPKESAWSTKGAPLCTNNLNQGKESSV 510
I VV WL + ++L+ + L +P E L N ++
Sbjct: 158 WKINVVCVEWLWQSIQRN---AVLEPQY-FQLDMPAEKIGLGAYVRLDPN-------TTE 206
Query: 511 RHSLSSDEMLRSTNSGIGMPLSLEENREERAEIHMKRESSLEATAVPSQQN----LLSAL 566
S S ++ + G L+ + + MKR + + + + N S+
Sbjct: 207 AKSYSENQKISKNKEKSGQSLAALAEEADLEPVIMKRGKKRDRSILWEELNNGKFEFSSR 266
Query: 567 SDENKTQLRTKEDFRVQSLQNMKLSTVF----RGKIFR----FSNSFPEDRRAEIVQWVN 618
S+EN L VQ L+ +L T K+F+ + FP + + + + ++
Sbjct: 267 SEENSVLLDDFTPETVQPLEENELDTELNIENEAKLFKNLTFYLYEFPNTKVSRLHKCLS 326
Query: 619 QGRGEVVNDDAKQNVHFTIECHGVIPKSADASETTYVSSHWIRSCLEDGCLLDVGSHILY 678
G+ +++ + F + H V+ WI CL + + H L
Sbjct: 327 DNGGQ-ISEFLSSTIDFVVIPHYFPVDELPIFSFPTVNEWWIERCLYYKKIFGIDEHALA 385
Query: 679 SPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCK----- 733
P + +P F ++ ++ ++ L+ +LGA E L + + LL
Sbjct: 386 KPFFRPSLVPYFNGLSIHLTGFKGEELSHLKKALTILGAVVHEFLGVQRSILLVNTNEPF 445
Query: 734 -FAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSP 773
K + A +W + + W++ ++ + + D SP
Sbjct: 446 SMKTRFKIQHATEWNVRVVGVAWLWNIIQSGKFI--DQVSP 484
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 686 PLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACK 745
PL GF C + + K R + LGA + TK VTHL+ KY+ A K
Sbjct: 6 PLKGF---VICCTSIDLKQRTEISTKATKLGAAYRSDFTKDVTHLIAGDFDTPKYKFAAK 62
Query: 746 W--GIPSITSEWI---YECVRQNE 764
I ++SEWI YE Q E
Sbjct: 63 SRPDIKIMSSEWIPVLYESWVQGE 86
>sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana
GN=At4g02110 PE=1 SV=3
Length = 1329
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 618 NQGRGEVVNDDAKQNVHFTIEC-HGVIPK---------SADASETTYVSSHWIRSCLEDG 667
N R ++V+ FT C H ++ K +A S V+ W+ + G
Sbjct: 28 NSLRSKLVSGGGVDVGQFTQSCTHLIVDKLLYDDPICVAARNSGKVVVTGSWVDHSFDIG 87
Query: 668 CLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKL-TKK 726
+LD + ILY PL +PG + C++ Y+ DR + + ++G +F + L +
Sbjct: 88 -MLDNANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANR 146
Query: 727 VTHLLCKFAGGLKYEAACKWG-IPSITSEWIYECVR 761
VTHL+C G KYE A + I + W+ +C++
Sbjct: 147 VTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLK 182
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 29/196 (14%)
Query: 102 GVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILK--- 158
GVK GF+ + + + GGV + T + +IV +L Y + +
Sbjct: 14 GVKFALVGFNPIHGNSLRSKLVSGGGVDVGQFTQSCTHLIVDKLL---YDDPICVAARNS 70
Query: 159 -KPIVTVNWLYQCW------NEHRVV--PQESYKVLPFS-GLMICVTRIPADERKEMEKL 208
K +VT +W+ + N + ++ P +P S L++C+T +R+++ ++
Sbjct: 71 GKVVVTGSWVDHSFDIGMLDNANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMRM 130
Query: 209 IVQNGGKYS-PELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFD 267
+ GG++S P + + THLIC Y EG+K+++AKR I ++N +W +
Sbjct: 131 VELMGGQFSKPLVANRVTHLIC------------YKFEGEKYELAKRIKRIKLVNHRWLE 178
Query: 268 QSMARRACLNEESYTV 283
+ L E Y +
Sbjct: 179 DCLKNWKLLPEVDYEI 194
>sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus GN=Paxip1 PE=1 SV=1
Length = 1056
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 608 DRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCL 664
D +++Q + G+ + V+ +A + H E G P+ +A E V W+ +
Sbjct: 23 DIDPQVIQLLKAGKAKEVSYNALAS-HIISE-DGDNPEVGEAREVFDLPVVKPSWVTLSV 80
Query: 665 EDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT 724
+ G LL V +SP CQ F C+SQ +DR L L G L
Sbjct: 81 QCGALLPVNG---FSPESCQI----FFGLTACLSQVSSEDRSALWALVTFHGGSCQLNLN 133
Query: 725 KKVTHLLCKFAGGLKYEAACK-WGIPSITSEWIYECVRQ 762
KK THL+ G KYE A K I +T +W+ +CV +
Sbjct: 134 KKCTHLIVPEPKGEKYERAVKRTSIKIVTPDWVLDCVSE 172
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 655 VSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFV 714
V++HW+ + L+ L+ L+ P+ + V+ + + DR L+ + ++
Sbjct: 659 VTAHWLNTVLKKKKLMP-PHRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYL 717
Query: 715 LGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI-------YECVRQ 762
GAK+ L + T L+CK GLKYE A +W IP + ++W+ +E +RQ
Sbjct: 718 AGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNAQWLGDILLGNFEALRQ 772
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 30/210 (14%)
Query: 119 EKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNEHRVVP 178
++++ A GG + T + ++ + +++ Y AL K+ VT +WL + +++P
Sbjct: 617 KRIIQAHGGTVDPTFTSRCTHLLCASQVSSMYTQALRERKR-CVTAHWLNTVLKKKKLMP 675
Query: 179 QESYKVLPF---------SGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLIC 229
P S +I VT ++R +++ + G KY+ L + T LIC
Sbjct: 676 PHRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYLAGAKYTGYLCRSNTVLIC 735
Query: 230 DISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWF-DQSMARRACLNEESYT------ 282
P G K++ AK W I +N +W D + L + Y+
Sbjct: 736 K------------EPSGLKYEKAKEW-RIPCVNAQWLGDILLGNFEALRQVQYSRYTAFN 782
Query: 283 VQDSSVSSKKTVMGSLTKQHSQVKVIGNAL 312
+ D V + V+G L + VKV L
Sbjct: 783 MPDPFVPTPHLVLGLLDAWRTPVKVTAELL 812
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
F GL C++++ +++R + L+ +GG L KKCTHLI P+G
Sbjct: 99 FFGLTACLSQVSSEDRSALWALVTFHGGSCQLNLNKKCTHLIVP------------EPKG 146
Query: 247 DKFKVAKRWGHIHIINRKW 265
+K++ A + I I+ W
Sbjct: 147 EKYERAVKRTSIKIVTPDW 165
Score = 40.0 bits (92), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 177 VPQESYKVLP-FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICD-ISFT 234
+P + K+ P + L++ P ++ ++KL + GG+ + E TKKCTHLI ++ T
Sbjct: 841 LPPPTKKLTPELTPLVLFTGFEPVQVQQYIKKLYIL-GGEVA-ECTKKCTHLIASKVTRT 898
Query: 235 IYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDS 286
+ FL V K HI+ W ++ R+ ++E++Y ++D+
Sbjct: 899 VKFLT--------AISVVK-----HIVTPDWLEECFKRQTFIDEQNYILRDA 937
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 89 LPKQGFT--CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVL 146
LP GF+ C G+ S +++ + LVT GG Q + +IV
Sbjct: 86 LPVNGFSPESCQIFFGLTACLSQVSSEDRSALWALVTFHGGSCQLNLNKKCTHLIVPEPK 145
Query: 147 AAKYKWALNILKKPIVTVNWLYQCWNEHR 175
KY+ A+ IVT +W+ C +E R
Sbjct: 146 GEKYERAVKRTSIKIVTPDWVLDCVSEKR 174
>sp|Q6ZW49|PAXI1_HUMAN PAX-interacting protein 1 OS=Homo sapiens GN=PAXIP1 PE=1 SV=2
Length = 1069
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 608 DRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCL 664
D +++Q + G+ + V+ +A + H E G P+ +A E V W+ +
Sbjct: 23 DIDPQVIQLLKAGKAKEVSYNALAS-HIISE-DGDNPEVGEAREVFDLPVVKPSWVILSV 80
Query: 665 EDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT 724
+ G LL V +SP CQ F C+SQ +DR L L G L
Sbjct: 81 QCGTLLPVNG---FSPESCQI----FFGITACLSQVSSEDRSALWALVTFYGGDCQLTLN 133
Query: 725 KKVTHLLCKFAGGLKYEAACKWG-IPSITSEWIYECVRQ 762
KK THL+ G KYE A K I +T +W+ +CV +
Sbjct: 134 KKCTHLIVPEPKGEKYECALKRASIKIVTPDWVLDCVSE 172
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 655 VSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCF 713
V++HW+ + L+ + V H L+ P+ + V+ + + DR L+ + +
Sbjct: 672 VTAHWLNTVLKKKKM--VPPHRALHFPVAFPPGGKPCSQHIISVTGFVDSDRDDLKLMAY 729
Query: 714 VLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI-------YECVRQNEVV 766
+ GAK+ L + T L+CK GLKYE A +W IP + ++W+ +E +RQ +
Sbjct: 730 LAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEWRIPCVNAQWLGDILLGNFEALRQIQYS 789
Query: 767 SLDHFS 772
FS
Sbjct: 790 RYTAFS 795
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 155/405 (38%), Gaps = 86/405 (21%)
Query: 89 LPKQGFT--CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVL 146
+P++GF C A+ S + +K +++ A GG + T + ++ ++ +
Sbjct: 600 IPEEGFLLGCVFAIADYPEQMSDKQLLATWK--RIIQAHGGTVDPTFTSRCTHLLCESQV 657
Query: 147 AAKYKWALNILKKPIVTVNWLYQCWNEHRVVPQESYKVLPF---------SGLMICVTRI 197
++ Y A+ K+ VT +WL + ++VP P S +I VT
Sbjct: 658 SSAYAQAIRERKR-CVTAHWLNTVLKKKKMVPPHRALHFPVAFPPGGKPCSQHIISVTGF 716
Query: 198 PADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGH 257
+R +++ + G KY+ L + T LIC P G K++ AK W
Sbjct: 717 VDSDRDDLKLMAYLAGAKYTGYLCRSNTVLICK------------EPTGLKYEKAKEW-R 763
Query: 258 IHIINRKWF-DQSMARRACLNEESY------TVQDSSVSSKKTVMGSLTKQHSQVKVIGN 310
I +N +W D + L + Y ++QD ++ V+ L +
Sbjct: 764 IPCVNAQWLGDILLGNFEALRQIQYSRYTAFSLQDPFAPTQHLVLNLL-----------D 812
Query: 311 ALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPVVSKDGAIE---APTAQ 367
A P ++ E L+S+ Q+ A S SK IE PT +
Sbjct: 813 AWRVPLKVSAEL-LMSIRLPPKLKQNEVANVQPS-----------SKRARIEDVPPPTKK 860
Query: 368 TRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNG 427
E V + GFE ++++ + + GG S
Sbjct: 861 LTPELTPFV--------------------LFTGFEPVQVQQYIKKLYILGGEVAESAQK- 899
Query: 428 LTHIVVGTLSEADKREVRSLASLGIIQ-VVKSTWLEDCDRERREI 471
TH++ ++ R V+ L ++ +++ +V WLE+C R ++ I
Sbjct: 900 CTHLIASKVT----RTVKFLTAISVVKHIVTPEWLEECFRCQKFI 940
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 153 ALNILKKPIVTVNWLYQCWNEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEK 207
A + P+V +W+ ++P ES ++ F G+ C++++ +++R +
Sbjct: 62 AREVFDLPVVKPSWVILSVQCGTLLPVNGFSPESCQI--FFGITACLSQVSSEDRSALWA 119
Query: 208 LIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFD 267
L+ GG L KKCTHLI P+G+K++ A + I I+ W
Sbjct: 120 LVTFYGGDCQLTLNKKCTHLIVP------------EPKGEKYECALKRASIKIVTPDWVL 167
Query: 268 QSMARRACLNEESY 281
++ + +E Y
Sbjct: 168 DCVSEKTKKDEAFY 181
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 73 LLGPQCVLSCAKENRALPKQGFT--CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQ 130
++ P V+ + LP GF+ C G+ S +++ + LVT GG Q
Sbjct: 70 VVKPSWVILSVQCGTLLPVNGFSPESCQIFFGITACLSQVSSEDRSALWALVTFYGGDCQ 129
Query: 131 TKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNE 173
+ +IV KY+ AL IVT +W+ C +E
Sbjct: 130 LTLNKKCTHLIVPEPKGEKYECALKRASIKIVTPDWVLDCVSE 172
>sp|Q5XIY8|PAXI1_DANRE PAX-interacting protein 1 OS=Danio rerio GN=paxip1 PE=2 SV=1
Length = 943
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 655 VSSHWIRSCLEDGCLLDVGSH-ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCF 713
V++HW+ + L+ + V H L+ P + V+ + + DR L+ + +
Sbjct: 734 VTAHWLNTVLKKKKM--VPPHRTLHLPFSFPPGAKPCAQHIISVTGFVDSDRDDLKLMAY 791
Query: 714 VLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI-------YECVRQ 762
+ GA++ L + T L+CK GLKYE A +W IP + ++W+ +E +RQ
Sbjct: 792 LAGARYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNAQWLCDILLGNFEALRQ 847
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 36/193 (18%)
Query: 89 LPKQGFTCCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKA-TLDVSF-----VIV 142
+P++GF V I + D E+ ++L+ ++Q T+D + ++
Sbjct: 663 IPEEGFL-------VGCIFAIADYPEQMADKQLLATWKRIIQLNGGTVDSALNRCTHLLC 715
Query: 143 KNVLAAKYKWALNILKKPIVTVNWLYQCWNEHRVVPQESYKVLPFS---------GLMIC 193
++ ++ Y AL K+ VT +WL + ++VP LPFS +I
Sbjct: 716 ESQVSNTYLQALREGKR-CVTAHWLNTVLKKKKMVPPHRTLHLPFSFPPGAKPCAQHIIS 774
Query: 194 VTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAK 253
VT +R +++ + G +Y+ L + T LIC P G K++ AK
Sbjct: 775 VTGFVDSDRDDLKLMAYLAGARYTGYLCRSNTVLICK------------EPSGLKYEKAK 822
Query: 254 RWGHIHIINRKWF 266
W I +N +W
Sbjct: 823 EW-RIPCVNAQWL 834
Score = 37.4 bits (85), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 608 DRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCL 664
D ++VQ + G+G+ V+ +A H E G P+ ++ E V W+ +
Sbjct: 23 DIDQKVVQLLKSGKGKEVSYNALA-THIIAE-DGDNPEVGESREVFDLPVVKPSWVILSV 80
Query: 665 EDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT 724
+ G LL V +SP Q F C+ E L + F G
Sbjct: 81 KCGDLLPVTG---FSPESGQV----FFGVTACLPHLAEDLNALWAFITFY-GGDCQLHFN 132
Query: 725 KKVTHLLCKFAGGLKYEAACKW-GIPSITSEWIYECVRQ 762
KK THL+ G KYE A + I +T EWI + V++
Sbjct: 133 KKCTHLVVPEPKGAKYECALRHNNIKIVTPEWILDSVKE 171
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
F G+ C+ + A++ + I GG KKCTHL+ P+G
Sbjct: 99 FFGVTACLPHL-AEDLNALWAFITFYGGDCQLHFNKKCTHLVVP------------EPKG 145
Query: 247 DKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
K++ A R +I I+ +W S+ + +E Y
Sbjct: 146 AKYECALRHNNIKIVTPEWILDSVKEKNRKDEMLY 180
>sp|Q90WJ3|PAXI1_XENLA PAX-interacting protein 1 OS=Xenopus laevis GN=paxip1 PE=1 SV=1
Length = 1256
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 655 VSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPG----FERFRFCVSQYEEKDRVLLRN 710
+++HW+ + L+ ++ Y LH P + V+ + + DR L+
Sbjct: 861 ITAHWLNAVLKKKKMVPP-----YRALHFPVAFPPGGKPCSQHIISVTGFVDSDRDDLKL 915
Query: 711 LCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQN 763
+ ++ GAK+ L + T L+CK GLKYE A +W IP + + W+ + + N
Sbjct: 916 MGYLAGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNALWLCDILLGN 968
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 187 FSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEG 246
F G+ C++++ D+R + L GG L KKCTHLI P+G
Sbjct: 99 FFGVTACLSQVSPDDRNSLWALTTFYGGDCQLSLNKKCTHLIVP------------EPKG 146
Query: 247 DKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
+K++ A + G I I+ W S++ + +E Y
Sbjct: 147 NKYEYAFQRGSIKIVTPDWVLDSVSEKTKKDEALY 181
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 119 EKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKPIVTVNWLYQCWNEHRVVP 178
++++ GG + + + ++ ++ +++ Y AL K+ +T +WL + ++VP
Sbjct: 819 KRIIQTHGGTVDAALSSRCTHLLCESQVSSMYAQALKERKR-CITAHWLNAVLKKKKMVP 877
Query: 179 QESYKVL-----------PFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHL 227
Y+ L P S +I VT +R +++ + G KY+ L + T L
Sbjct: 878 --PYRALHFPVAFPPGGKPCSQHIISVTGFVDSDRDDLKLMGYLAGAKYTGYLCRSNTVL 935
Query: 228 ICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWF 266
IC P G K++ AK W I +N W
Sbjct: 936 ICK------------EPSGLKYEKAKEW-RIPCVNALWL 961
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 13/157 (8%)
Query: 608 DRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCL 664
D ++VQ + G+ + V+ +A H E G P+ +A E V W+ +
Sbjct: 23 DLDPKVVQMLKAGKAKEVSYNAL-ATHIIAE-DGDNPEVGEAREVFDLPVVKPSWVILSV 80
Query: 665 EDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT 724
G L +SP Q F C+SQ DR L L G L
Sbjct: 81 RCGVRLPENG---FSPESGQI----FFGVTACLSQVSPDDRNSLWALTTFYGGDCQLSLN 133
Query: 725 KKVTHLLCKFAGGLKYEAACKWG-IPSITSEWIYECV 760
KK THL+ G KYE A + G I +T +W+ + V
Sbjct: 134 KKCTHLIVPEPKGNKYEYAFQRGSIKIVTPDWVLDSV 170
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 177 VPQESYKVLPFSGLMICVTRI-PADERKEMEKLIVQNGGKYSPELTKKCTHLICD-ISFT 234
+P + K+ P + T P ++ ++KL + GG+ + + +KCTHL+ + ++ T
Sbjct: 1041 IPPPTKKLSPDQTPHVIFTGFDPLQVQQYIKKLYIL-GGEVA-DTAQKCTHLVANKVTRT 1098
Query: 235 IYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESYTVQDS 286
+ FL VAK HI+ +W D+S + E++Y ++D+
Sbjct: 1099 VKFLT--------AISVAK-----HIVTPEWLDESFKSQKFAEEQNYILRDA 1137
>sp|A0JNA8|PAXI1_BOVIN PAX-interacting protein 1 OS=Bos taurus GN=PAXIP1 PE=2 SV=1
Length = 984
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 655 VSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFV 714
+++HW+ + L+ L+ L+ P+ + V+ + + DR L+ + ++
Sbjct: 587 ITAHWLNTVLKKKKLVP-PHRALHFPVAFPPGGKPCSQHIISVTGFVDNDRDDLKLMAYL 645
Query: 715 LGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI-------YECVRQNE 764
GAK+ L + T L+C+ GLKYE A +W IP + ++W+ +E +RQ +
Sbjct: 646 AGAKYTGYLCRSNTVLICREPTGLKYEKAKEWRIPCVNAQWLGDILLGNFEALRQTQ 702
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 608 DRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSADASET---TYVSSHWIRSCL 664
D +++Q + G+ + V+ +A + H E G P+ +A E V W+ +
Sbjct: 23 DLDPQVIQLLKAGKAKEVSYNALAS-HIISE-DGDNPEVGEAREVFDLPVVKPSWVILSV 80
Query: 665 EDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLT 724
+ G LL V +SP CQ F C+SQ +DR L + G L
Sbjct: 81 QCGALLPVNG---FSPESCQI----FFGITACLSQVSPEDRSALWAMLTFHGGGCQLNLN 133
Query: 725 KKVTHLLCKFAGGLKYEAACKWG-IPSITSEWIYECVRQ 762
+K THL+ G KYE A + I +T +W+ +C+ +
Sbjct: 134 RKCTHLVVPEPKGEKYECALRRASIKIVTPDWVLDCISE 172
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 153 ALNILKKPIVTVNWLYQCWNEHRVVP-----QESYKVLPFSGLMICVTRIPADERKEMEK 207
A + P+V +W+ ++P ES ++ F G+ C++++ ++R +
Sbjct: 62 AREVFDLPVVKPSWVILSVQCGALLPVNGFSPESCQI--FFGITACLSQVSPEDRSALWA 119
Query: 208 LIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGHIHIINRKWFD 267
++ +GG L +KCTHL+ P+G+K++ A R I I+ W
Sbjct: 120 MLTFHGGGCQLNLNRKCTHLVVP------------EPKGEKYECALRRASIKIVTPDWVL 167
Query: 268 QSMARRACLNEESY 281
++ + +E Y
Sbjct: 168 DCISEKTRKDEALY 181
Score = 40.0 bits (92), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 153/398 (38%), Gaps = 86/398 (21%)
Query: 89 LPKQGFT--CCLAMDGVKVIASGFDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVL 146
+P++GF C A+ S + +K +++ A GG + + + ++ ++ +
Sbjct: 515 IPEEGFLLGCVFAIADYPEQMSDKQLLATWK--RIIQAHGGAVDPTFSSRCTHLLCESQV 572
Query: 147 AAKYKWALNILKKPIVTVNWLYQCWNEHRVVPQESYKVLPF---------SGLMICVTRI 197
+ + A+ K+ +T +WL + ++VP P S +I VT
Sbjct: 573 SGLFAQAMKERKR-CITAHWLNTVLKKKKLVPPHRALHFPVAFPPGGKPCSQHIISVTGF 631
Query: 198 PADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRWGH 257
++R +++ + G KY+ L + T LIC P G K++ AK W
Sbjct: 632 VDNDRDDLKLMAYLAGAKYTGYLCRSNTVLICR------------EPTGLKYEKAKEW-R 678
Query: 258 IHIINRKWF-DQSMARRACLNEESY------TVQDSSVSSKKTVMGSLTKQHSQVKVIGN 310
I +N +W D + L + Y +QD + + V+ L +
Sbjct: 679 IPCVNAQWLGDILLGNFEALRQTQYGRYTAFGLQDPFAPTPQLVLSLL-----------D 727
Query: 311 ALSAPSSMATESNLLSVSCTGFADQDLEATFSQSMPSMYMDAPVVSKDGAIE---APTAQ 367
A P +++E L+ V Q+ E T Q PS SK IE PT +
Sbjct: 728 AWRVPLKVSSEL-LMGVRLPPKPKQN-EVTNVQ--PS--------SKRARIEDIPPPTKK 775
Query: 368 TRNESNSDVCVANDSQSEDNDLYLSDCRIVLVGFEASEMRKLVNMVRRGGGSRYVSYNNG 427
E V + GFE ++++ + + GG S
Sbjct: 776 LTPELTPFV--------------------LFTGFEPVQVQQYIKKLYILGGEVAESAQK- 814
Query: 428 LTHIVVGTLSEADKREVRSLASLGIIQ-VVKSTWLEDC 464
TH++ ++ R V+ L ++ +++ +V WLE+C
Sbjct: 815 CTHLIASKVT----RTVKFLTAISVVKHIVTPEWLEEC 848
>sp|P38850|RT107_YEAST Regulator of Ty1 transposition protein 107 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RTT107 PE=1
SV=1
Length = 1070
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 26/136 (19%)
Query: 164 VNWLYQCWNEHRVVPQESYKVL--PFSG-------LMICVTRIPADERKEMEKLIVQNGG 214
V+WL+ + + P K++ PF L + T +R +++L+ GG
Sbjct: 345 VSWLFYMFALQKFTPVSQCKLIHQPFHAKLFTSKELTVAYTNYFGSQRFYIQRLVEILGG 404
Query: 215 KYSPELTKKCTHLICDISFTIYFLNFPYTPEGDKFKVAKRW-----GHIHIINRKWFDQS 269
+PELT+K THLI + G KFKVAK+W I + N W +Q
Sbjct: 405 LSTPELTRKNTHLITKSTI------------GKKFKVAKKWSLDPQNAIIVTNHMWLEQC 452
Query: 270 MARRACLNEESYTVQD 285
+ LN + Q+
Sbjct: 453 YMNNSKLNPKDSRFQN 468
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 676 ILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFA 735
+++ P H + L + + Y R ++ L +LG +LT+K THL+ K
Sbjct: 365 LIHQPFHAK--LFTSKELTVAYTNYFGSQRFYIQRLVEILGGLSTPELTRKNTHLITKST 422
Query: 736 GGLKYEAACKW------GIPSITSEWIYECVRQN 763
G K++ A KW I W+ +C N
Sbjct: 423 IGKKFKVAKKWSLDPQNAIIVTNHMWLEQCYMNN 456
Score = 37.4 bits (85), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 114 EKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKY----KWALNILKKPIVTVN-WLY 168
++F I++LV +GG+ + T + +I K+ + K+ KW+L+ IVT + WL
Sbjct: 391 QRFYIQRLVEILGGLSTPELTRKNTHLITKSTIGKKFKVAKKWSLDPQNAIIVTNHMWLE 450
Query: 169 QCW-NEHRVVPQES 181
QC+ N ++ P++S
Sbjct: 451 QCYMNNSKLNPKDS 464
>sp|Q10337|BRC1_SCHPO BRCT-containing protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=brc1 PE=1 SV=1
Length = 878
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 593 VFRGKIFRFSN--SFPEDRRAEIVQW---VNQGRGEVVNDDAKQNVHFTIECHGVIPKSA 647
V GK FSN + P + R + ++ + E +ND ++ ++ + A
Sbjct: 220 VLHGKRIYFSNDLNLPTNFRHSLQKFSVGIGAKIAESIND---CDIFIGLKRDTIEFNLA 276
Query: 648 DASETTYVSSHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRF-CVSQYEEKDRV 706
TT + W+ + +L L + LH P GF + + V+ Y + R+
Sbjct: 277 SNKNTTIGTISWLLNLF----VLGSWKSPLLNALHYPFPSVGFLKDQMVAVTNYTDAARI 332
Query: 707 LLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQ 762
L L GA + + L T L+ + G KY AA W IP++ W+Y +
Sbjct: 333 YLEKLLLACGATYTKDLKPTNTLLIAASSYGQKYGAAKVWNIPTVHHSWLYSSFKN 388
Score = 37.0 bits (84), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 657 SHWIRSCLEDGCLLDVGSHILYSPLHCQTPLPGFERFRFCVSQYEEKDRVLLRNLCFVLG 716
++WIR C++ LL+ YS C P F+ Q + L+ + G
Sbjct: 84 TNWIRDCVDKNTLLN------YSFYSCN-PYLLFKGICASSCQIDSYQSSLIDDALETFG 136
Query: 717 AKFMEKLTKKVTHLLCKFAGGLKYEAACK-------WGIPSITSEWIYECVRQNEVVSLD 769
+F + L K +THL G A CK I I +W+ +C++ +++ D
Sbjct: 137 GRFSKGLMKSMTHLFTYSGMG----AKCKKVLDKPSLSIKLIHPQWLLDCLQFGQLIDQD 192
Query: 770 HF 771
+
Sbjct: 193 PY 194
>sp|P18887|XRCC1_HUMAN DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2
Length = 633
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 696 CVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEW 755
+S ++ R LR+ LGAK+ T+ THL+C FA KY G + EW
Sbjct: 326 VLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEW 385
Query: 756 IYEC 759
+ +C
Sbjct: 386 VLDC 389
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 110 FDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKP---IVTVNW 166
F DE+ K+ + VTA G L+ + V FVI ++ AL + P V W
Sbjct: 554 FPGDERRKLIRYVTAFNGELEDNMSDRVQFVITAQEWDPSFEEAL--MDNPSLAFVRPRW 611
Query: 167 LYQCWNEHRVVPQESYKVLP 186
+Y C + +++P + Y V+P
Sbjct: 612 IYSCNEKQKLLPHQLYGVVP 631
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 589 KLSTVFRGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSAD 648
+L F+GK F FP D R +++++V GE + D+ V F I P +
Sbjct: 538 ELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGE-LEDNMSDRVQFVITAQEWDPSFEE 596
Query: 649 A----SETTYVSSHWIRSCLEDGCLLDVGSHILY 678
A +V WI SC E LL H LY
Sbjct: 597 ALMDNPSLAFVRPRWIYSCNEKQKLL---PHQLY 627
Score = 37.0 bits (84), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R P+E K+L G+++ ++ R E+ ++ G KY P+ T+ THLIC + T
Sbjct: 310 RAGPEELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANT 367
Query: 235 IYF 237
+
Sbjct: 368 PKY 370
>sp|Q9ESZ0|XRCC1_RAT DNA repair protein XRCC1 OS=Rattus norvegicus GN=Xrcc1 PE=2 SV=2
Length = 631
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 696 CVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEW 755
+S ++ R LR+ LGAK+ T THL+C FA KY G + EW
Sbjct: 326 VLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEW 385
Query: 756 IYEC 759
+ +C
Sbjct: 386 VLDC 389
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 110 FDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKP---IVTVNW 166
F DE+ K+ + VTA G L+ + V FVI ++ AL ++ P V W
Sbjct: 552 FPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPNFEEAL--MENPSLAFVRPRW 609
Query: 167 LYQCWNEHRVVPQESYKVLP 186
+Y C + +++P + Y V+P
Sbjct: 610 IYSCNEKQKLLPHQLYGVVP 629
Score = 40.0 bits (92), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 589 KLSTVFRGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSAD 648
+L F+GK F FP D R +++++V GE + D V F I P +
Sbjct: 536 ELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGE-LEDYMSDRVQFVITAQEWDPNFEE 594
Query: 649 A----SETTYVSSHWIRSCLEDGCLLDVGSHILY 678
A +V WI SC E LL H LY
Sbjct: 595 ALMENPSLAFVRPRWIYSCNEKQKLL---PHQLY 625
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R PQE K+L G+++ ++ R E+ ++ G KY P+ T THLIC + T
Sbjct: 310 RAGPQELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANT 367
Query: 235 IYF 237
+
Sbjct: 368 PKY 370
>sp|Q60596|XRCC1_MOUSE DNA repair protein XRCC1 OS=Mus musculus GN=Xrcc1 PE=1 SV=2
Length = 631
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 696 CVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEW 755
+S ++ R LR+ LGAK+ T THL+C FA KY G + EW
Sbjct: 326 VLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEW 385
Query: 756 IYEC 759
+ +C
Sbjct: 386 VLDC 389
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 110 FDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKP---IVTVNW 166
F DE+ ++ + VTA G L+ V FVI ++ AL ++ P V W
Sbjct: 552 FPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEAL--MENPSLAFVRPRW 609
Query: 167 LYQCWNEHRVVPQESYKVLP 186
+Y C + +++P + Y V+P
Sbjct: 610 IYSCNEKQKLLPHQLYGVVP 629
Score = 40.0 bits (92), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 589 KLSTVFRGKIFRFSNSFPEDRRAEIVQWVNQGRGEVVNDDAKQNVHFTIECHGVIPKSAD 648
+L F GK F FP D R ++++V GE + D + V F I P +
Sbjct: 536 ELPDFFEGKHFFLYGEFPGDERRRLIRYVTAFNGE-LEDYMNERVQFVITAQEWDPNFEE 594
Query: 649 A----SETTYVSSHWIRSCLEDGCLLDVGSHILY 678
A +V WI SC E LL H LY
Sbjct: 595 ALMENPSLAFVRPRWIYSCNEKQKLL---PHQLY 625
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R PQE K+L G+++ ++ R E+ ++ G KY P+ T THLIC + T
Sbjct: 310 RTGPQELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANT 367
Query: 235 IYF 237
+
Sbjct: 368 PKY 370
>sp|O54935|XRCC1_CRIGR DNA repair protein XRCC1 OS=Cricetulus griseus GN=XRCC1 PE=2 SV=1
Length = 633
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 696 CVSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEW 755
+S ++ R LR+ LGAK+ T THL+C FA KY G + EW
Sbjct: 327 VLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEW 386
Query: 756 IYEC 759
+ +C
Sbjct: 387 VLDC 390
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 110 FDVDEKFKIEKLVTAMGGVLQTKATLDVSFVIVKNVLAAKYKWALNILKKP---IVTVNW 166
F DE+ K+ + VTA G L+ + V FVI ++ AL ++ P V W
Sbjct: 554 FPGDERRKLIRYVTAFNGELEDYMSERVQFVITAQEWDPIFEEAL--MENPSLAFVRPRW 611
Query: 167 LYQCWNEHRVVPQESYKVLP 186
+Y C + +++P + Y V+P
Sbjct: 612 IYSCNEKQKLLPHQLYGVVP 631
Score = 40.0 bits (92), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 14/124 (11%)
Query: 560 QNLLSALSDENK-TQLRTKEDFRVQSLQNMKLSTVFRGKIFRFSNSFPEDRRAEIVQWVN 618
++ + +DEN + T+ D + L + F+GK F FP D R +++++V
Sbjct: 513 EDPYAGSTDENTDNEASTEADLPIPELPDF-----FQGKHFFLYGEFPGDERRKLIRYVT 567
Query: 619 QGRGEVVNDDAKQNVHFTIECHGVIPKSADA----SETTYVSSHWIRSCLEDGCLLDVGS 674
GE + D + V F I P +A +V WI SC E LL
Sbjct: 568 AFNGE-LEDYMSERVQFVITAQEWDPIFEEALMENPSLAFVRPRWIYSCNEKQKLL---P 623
Query: 675 HILY 678
H LY
Sbjct: 624 HQLY 627
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 175 RVVPQESYKVLPFSGLMICVTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDISFT 234
R PQE K+L G+++ ++ R E+ ++ G KY P+ T THLIC + T
Sbjct: 311 RAGPQELGKIL--QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAFANT 368
Query: 235 IYF 237
+
Sbjct: 369 PKY 371
>sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=3
Length = 1724
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 187 FSGLMIC--VTRIPADERKEMEKLIVQNGGKYSPELTKKCTHLICDIS--FTIYFLNFPY 242
F+ + C V +P ++K+++ I +NGGK+S L +CTH+I D + + Y LN
Sbjct: 6 FANCIFCLKVKYLPQQQKKKLQTDIKENGGKFSFSLNPQCTHIILDNADVLSQYQLN--- 62
Query: 243 TPEGDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
+ + H+HI N + +S+ + L+ ++Y
Sbjct: 63 ---------SIQKNHVHIANPDFIWKSIREKRLLDVKNY 92
>sp|Q11185|HYI_CAEEL Putative hydroxypyruvate isomerase OS=Caenorhabditis elegans
GN=C05D11.5 PE=3 SV=1
Length = 262
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 17/114 (14%)
Query: 823 VHKIDDITRSDNLRDEANQTSAHNKRARISEDEDHD-----------TLPGVHLKDPHRS 871
VH + I +SD+ + A+QT + N R + ++H T+PG HL + +
Sbjct: 105 VHVMAGIPKSDDDLENAHQTYSENVRFAAEKFKEHKLICLIEPINKYTIPGYHLNNYEDA 164
Query: 872 TNY------NGDSMSKDNGEVPHIGSDVAAVIEDLVEQTSKVQDLKSPERSECD 919
+ N + D I + A++ L + +Q + P R CD
Sbjct: 165 MDVIQMDQSNNLKIQYDTFHAQQINGQIGAIMRKLKDYIGYIQVAQVPNRGACD 218
>sp|P49422|DNLJ_THESC DNA ligase OS=Thermus scotoductus GN=ligA PE=1 SV=1
Length = 674
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 697 VSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI 756
+S+ E+ + LLR L GAK + +++K ++L+ G K E A G+P++T E +
Sbjct: 602 LSRPREEVKALLRRL----GAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEEL 657
Query: 757 YECVRQN 763
Y + +
Sbjct: 658 YRLIEER 664
>sp|A7HJG6|DNLJ_FERNB DNA ligase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=ligA PE=3 SV=1
Length = 681
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 187 FSGLMICVTRIPAD-ERKEMEKLIVQNGGKYSPELTKKCTHLICDISFTIYFLNFPYTPE 245
GL CVT + R+E+++ I GG ++ LTKK +L+ T
Sbjct: 589 LDGLTFCVTGTLENFSREEIKRFIESLGGHFTDNLTKKTDYLLVG------------TNP 636
Query: 246 GDKFKVAKRWGHIHIINRKWFDQSMARRACLNEESY 281
G K + AK++G + ++N + F + + ++ +ES+
Sbjct: 637 GSKLEKAKKFG-VKVLNEQEFLEMLEKKGVELKESW 671
>sp|Q92357|CFR1_SCHPO Cell fusion protein cfr1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cfr1 PE=3 SV=1
Length = 620
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 727 VTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSLDHFSPKEVTTHDREAGLC 786
TH +C GG +YE A IP + +++ +C + +V++ F + +++ A +
Sbjct: 210 TTHFICSSTGGPEYEKAKAANIPILGLDYLLKCESEGRLVNVSGFYIENRASYNANASIN 269
Query: 787 TV 788
+V
Sbjct: 270 SV 271
>sp|O94623|REV1_SCHPO DNA repair protein rev1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rev1 PE=3 SV=3
Length = 935
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 690 FERFRFCVSQYEEKDRVLLRNLCFVLGAKFMEKLTKK--VTHLLCKFAGGLKYEAACKWG 747
F ++ Y + LR + G F++ + K +++L+C F L A +W
Sbjct: 64 FHGLAIAINGYTKPSYTELRQMIVSNGGTFIQYVDGKTSISYLVCSF---LTPSKARQWK 120
Query: 748 IPSITS-EWIYECVRQNEVVSLDHFSPKEVTTHDREAGLCTVSQFP------MQSVQMSS 800
+ EWI +C++Q +++ ++ + ++ +A L V+ P ++ +Q SS
Sbjct: 121 HQKVVKPEWIVDCIKQKKILPWINYRTFQASS--AQATLSFVASKPSQPEGNLEDIQTSS 178
Query: 801 ADE-------------PSQFINPLGGLQSSS 818
+E F++ L GL +SS
Sbjct: 179 QEEEHDNEKDKTKESKAKGFLDDLSGLSASS 209
>sp|Q72JN8|DNLJ_THET2 DNA ligase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 /
DSM 7039) GN=ligA PE=3 SV=1
Length = 676
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 697 VSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI 756
+S+ E+ + LLR L GAK + +++K ++L+ G K E A G+P++T E +
Sbjct: 605 LSRPREEVKALLRRL----GAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEEL 660
Query: 757 YECV 760
Y +
Sbjct: 661 YRLL 664
>sp|P26996|DNLJ_THET8 DNA ligase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579) GN=ligA PE=1 SV=1
Length = 676
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 697 VSQYEEKDRVLLRNLCFVLGAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWI 756
+S+ E+ + LLR L GAK + +++K ++L+ G K E A G+P++T E +
Sbjct: 605 LSRPREEVKALLRRL----GAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEEL 660
Query: 757 YECV 760
Y +
Sbjct: 661 YRLL 664
>sp|Q9LL84|DNLI4_ARATH DNA ligase 4 OS=Arabidopsis thaliana GN=LIG4 PE=1 SV=1
Length = 1219
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 716 GAKFMEKLTKKVTHLLCKFAGGLKYEAACKWGIPSITSEWIYECVRQNEVVSL 768
G KF L VTH + + G+KY+AA K I W+ +C +N+++ L
Sbjct: 683 GGKFSMNLNNSVTHCIAAESSGIKYQAA-KRQRDVIHFSWVLDCCSRNKMLPL 734
>sp|Q4WVG8|DNLI4_ASPFU DNA ligase 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=lig4 PE=3 SV=1
Length = 979
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Query: 408 KLVNMVRRGGGSRYVSYNNGLTHIVVGTLSEADKREVR--SLASLGIIQVVKSTWLEDCD 465
+L +V+ GG + NN H T+ AD+R V+ SL G + +++ +W+ DC
Sbjct: 747 ELEQLVKANGGM-FFQTNNAAPH----TICVADRRTVKAASLQKRGDVDIIRPSWIIDCV 801
Query: 466 RERREISILQRHVAYDLLLPKESAWSTKGAP----LCTNNLNQGKESSVRHSLSS----- 516
++ + L D LLP E P +N++Q +S R + S
Sbjct: 802 KQNEIDAGLP-----DFLLPFEPRHMFFATPGKHDEVASNVDQFGDSYARDTTSEELSDC 856
Query: 517 --------DEMLRSTNSGIGMPLSL 533
+ + S NSG MP L
Sbjct: 857 PESITKLIERLQESVNSGHEMPCGL 881
>sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3
Length = 952
Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 511 RHSLSSDEMLRSTNSGIGMPLSLEENREER-AEIHMKRESSLEATAVPSQQNLLSALSDE 569
+H+L D S NS G L N +E+ + HM +E+++ + P Q S L+D+
Sbjct: 849 KHTLFDD----SENSFRGKLKFLVRNFDEKDIKSHMFKENAVHNVSSPITQGSSSPLTDQ 904
Query: 570 NKTQLRTKEDFRVQSLQNMKLSTVFRGKIFRFSNSFPEDRRAEIVQ 615
+ R+ E +R L+ ++S++ G++F + ED + I+Q
Sbjct: 905 STPLPRSPEQYR--ELELRRVSSISSGELFTTQSEQVEDEESAIIQ 948
>sp|O74161|CHS5_CANAL Chitin biosynthesis protein CHS5 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CHS5 PE=3 SV=2
Length = 562
Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 715 LGAKF--MEKLTKKVTHLLCKFAG--GLKYEAACKWGIPSITSEWIYECVRQNEVVSLDH 770
+GAK+ +++ TH LC +Y A IP I EW+ C R+ +V +
Sbjct: 197 MGAKYPVQQQVKVDTTHFLCTRENKQNPEYVKANDMNIPIIRPEWLKACERERRIVGVRD 256
Query: 771 F 771
F
Sbjct: 257 F 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370,100,901
Number of Sequences: 539616
Number of extensions: 15586112
Number of successful extensions: 41143
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 40873
Number of HSP's gapped (non-prelim): 223
length of query: 1017
length of database: 191,569,459
effective HSP length: 128
effective length of query: 889
effective length of database: 122,498,611
effective search space: 108901265179
effective search space used: 108901265179
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)