Query 001769
Match_columns 1016
No_of_seqs 940 out of 6250
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:54:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001769.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001769hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2040 Glycine dehydrogenase 100.0 2E-228 4E-233 1889.4 60.5 914 83-1010 37-999 (1001)
2 PRK12566 glycine dehydrogenase 100.0 5E-209 1E-213 1873.0 86.6 900 92-1007 7-953 (954)
3 TIGR00461 gcvP glycine dehydro 100.0 3E-203 6E-208 1837.0 90.5 893 101-1001 1-939 (939)
4 PLN02414 glycine dehydrogenase 100.0 7E-198 2E-202 1812.1 94.2 915 92-1007 29-985 (993)
5 PRK05367 glycine dehydrogenase 100.0 3E-193 8E-198 1781.2 89.4 901 93-1008 5-954 (954)
6 COG0403 GcvP Glycine cleavage 100.0 3E-113 6E-118 941.5 42.0 435 93-530 2-447 (450)
7 PF02347 GDC-P: Glycine cleava 100.0 6E-101 1E-105 872.7 37.5 425 100-527 1-429 (429)
8 COG1003 GcvP Glycine cleavage 100.0 5E-101 1E-105 841.7 35.2 416 558-980 30-496 (496)
9 PF02347 GDC-P: Glycine cleava 100.0 7.6E-64 1.7E-68 569.4 31.4 359 514-912 5-384 (429)
10 PRK04366 glycine dehydrogenase 100.0 1.6E-55 3.4E-60 522.2 39.1 405 546-1001 32-481 (481)
11 PRK00451 glycine dehydrogenase 100.0 4.3E-55 9.4E-60 515.7 42.6 422 100-528 2-443 (447)
12 COG0403 GcvP Glycine cleavage 100.0 1.9E-55 4.1E-60 484.7 30.5 361 516-911 15-399 (450)
13 PRK04366 glycine dehydrogenase 100.0 5.3E-54 1.1E-58 509.2 37.5 380 126-529 30-444 (481)
14 TIGR00461 gcvP glycine dehydro 100.0 5.5E-54 1.2E-58 525.8 38.3 399 105-529 413-863 (939)
15 PRK12566 glycine dehydrogenase 100.0 6.5E-52 1.4E-56 503.9 29.4 350 514-910 19-393 (954)
16 PRK05367 glycine dehydrogenase 100.0 3E-47 6.5E-52 475.1 39.7 403 101-529 420-871 (954)
17 PLN02414 glycine dehydrogenase 100.0 4.5E-44 9.8E-49 444.2 37.9 403 101-529 447-903 (993)
18 KOG2040 Glycine dehydrogenase 100.0 1.2E-41 2.6E-46 384.0 20.7 351 516-910 60-432 (1001)
19 COG1003 GcvP Glycine cleavage 100.0 5.7E-40 1.2E-44 361.2 30.1 389 118-529 19-443 (496)
20 cd00613 GDC-P Glycine cleavage 100.0 2E-35 4.3E-40 342.8 37.8 375 150-527 1-398 (398)
21 PRK00451 glycine dehydrogenase 100.0 3.7E-34 8E-39 337.8 36.0 372 515-924 7-401 (447)
22 COG0520 csdA Selenocysteine ly 100.0 1.1E-31 2.4E-36 310.2 36.1 360 151-529 6-401 (405)
23 cd00613 GDC-P Glycine cleavage 100.0 3.7E-29 7.9E-34 290.4 33.9 335 570-923 1-360 (398)
24 PRK09295 bifunctional cysteine 100.0 5.5E-26 1.2E-30 265.1 34.4 361 151-528 6-399 (406)
25 PRK10874 cysteine sulfinate de 99.9 5E-25 1.1E-29 256.5 35.2 362 148-529 4-394 (401)
26 TIGR03392 FeS_syn_CsdA cystein 99.9 6.5E-25 1.4E-29 255.3 34.6 356 152-529 5-391 (398)
27 PLN02855 Bifunctional selenocy 99.9 6.9E-25 1.5E-29 257.3 33.9 309 207-529 72-414 (424)
28 PF00266 Aminotran_5: Aminotra 99.9 1.4E-25 3.1E-30 258.3 26.2 327 179-523 10-371 (371)
29 COG1104 NifS Cysteine sulfinat 99.9 4.1E-24 9E-29 239.5 30.3 290 208-529 41-373 (386)
30 TIGR01979 sufS cysteine desulf 99.9 1.3E-23 2.9E-28 244.5 35.1 305 209-528 60-396 (403)
31 TIGR01976 am_tr_V_VC1184 cyste 99.9 3E-23 6.6E-28 240.9 33.7 298 206-527 55-397 (397)
32 TIGR01814 kynureninase kynuren 99.9 1.6E-23 3.4E-28 244.5 31.4 293 222-528 80-402 (406)
33 cd06453 SufS_like Cysteine des 99.9 7.4E-23 1.6E-27 235.6 34.6 307 205-527 37-373 (373)
34 PLN03032 serine decarboxylase; 99.9 4.2E-23 9.1E-28 236.4 31.4 242 628-892 62-318 (374)
35 PLN02651 cysteine desulfurase 99.9 5E-23 1.1E-27 236.8 31.4 283 207-521 39-364 (364)
36 TIGR03402 FeS_nifS cysteine de 99.9 1.1E-22 2.5E-27 234.9 34.0 292 206-529 37-368 (379)
37 COG0156 BioF 7-keto-8-aminopel 99.9 8.1E-24 1.8E-28 241.0 23.2 316 164-529 43-386 (388)
38 PRK13520 L-tyrosine decarboxyl 99.9 2.3E-22 4.9E-27 231.1 32.7 346 147-528 1-366 (371)
39 TIGR01977 am_tr_V_EF2568 cyste 99.9 5.2E-22 1.1E-26 228.7 34.2 301 207-528 40-374 (376)
40 PRK02769 histidine decarboxyla 99.9 3.2E-22 7E-27 230.5 32.2 238 628-888 61-310 (380)
41 COG0520 csdA Selenocysteine ly 99.9 3.4E-22 7.4E-27 231.4 32.2 243 625-890 59-320 (405)
42 COG0076 GadB Glutamate decarbo 99.9 1.8E-22 3.9E-27 236.3 29.5 315 565-911 35-381 (460)
43 PRK08114 cystathionine beta-ly 99.9 1.7E-23 3.6E-28 241.1 20.2 264 635-951 65-352 (395)
44 PLN02263 serine decarboxylase 99.9 4.3E-22 9.2E-27 231.4 31.3 237 629-888 130-380 (470)
45 TIGR01788 Glu-decarb-GAD gluta 99.9 9.9E-22 2.2E-26 229.5 33.5 321 560-911 16-366 (431)
46 COG2873 MET17 O-acetylhomoseri 99.9 1.7E-22 3.7E-27 220.2 23.5 277 636-953 66-384 (426)
47 PRK09028 cystathionine beta-ly 99.9 4.9E-23 1.1E-27 237.8 20.0 265 635-952 64-349 (394)
48 PF00282 Pyridoxal_deC: Pyrido 99.9 4.1E-22 8.8E-27 229.2 27.2 332 560-909 11-372 (373)
49 COG1104 NifS Cysteine sulfinat 99.9 1.1E-21 2.3E-26 220.1 28.7 275 591-897 2-288 (386)
50 PRK13520 L-tyrosine decarboxyl 99.9 1.8E-21 3.8E-26 223.8 29.9 297 567-894 1-308 (371)
51 COG0626 MetC Cystathionine bet 99.9 1.2E-22 2.6E-27 231.0 19.8 267 635-953 66-353 (396)
52 PLN02724 Molybdenum cofactor s 99.9 3.2E-21 7E-26 242.1 32.3 308 205-529 72-484 (805)
53 PRK08861 cystathionine gamma-s 99.9 3.2E-22 6.9E-27 231.1 20.7 267 634-953 55-342 (388)
54 TIGR02006 IscS cysteine desulf 99.9 1.9E-20 4.2E-25 218.3 34.3 288 210-529 46-373 (402)
55 TIGR03403 nifS_epsilon cystein 99.9 1.5E-20 3.2E-25 217.6 32.6 288 210-529 41-371 (382)
56 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-20 5.2E-25 214.7 33.8 339 149-528 1-371 (373)
57 PRK02948 cysteine desulfurase; 99.9 1.8E-20 3.9E-25 216.7 32.6 291 206-529 38-370 (381)
58 PLN02590 probable tyrosine dec 99.9 9.6E-21 2.1E-25 225.3 30.9 338 566-932 106-488 (539)
59 PRK05613 O-acetylhomoserine am 99.9 1.8E-21 3.8E-26 228.0 22.6 279 634-953 71-395 (437)
60 PRK05967 cystathionine beta-ly 99.9 8.6E-22 1.9E-26 227.2 19.3 263 634-949 66-352 (395)
61 TIGR03799 NOD_PanD_pyr putativ 99.9 9E-20 2E-24 217.3 35.0 324 560-911 61-439 (522)
62 PRK06702 O-acetylhomoserine am 99.9 4.2E-21 9.2E-26 223.6 22.4 281 634-953 63-383 (432)
63 PLN02955 8-amino-7-oxononanoat 99.9 1.3E-20 2.8E-25 219.3 23.8 312 164-529 106-457 (476)
64 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 1.1E-21 2.4E-26 225.7 14.6 266 634-952 57-345 (386)
65 PLN02880 tyrosine decarboxylas 99.9 6.5E-20 1.4E-24 217.9 29.9 325 566-911 58-419 (490)
66 PRK08248 O-acetylhomoserine am 99.9 1.8E-20 3.9E-25 219.5 24.7 279 635-953 67-386 (431)
67 TIGR01324 cysta_beta_ly_B cyst 99.9 6.5E-21 1.4E-25 219.9 20.3 263 635-950 53-336 (377)
68 PRK02769 histidine decarboxyla 99.9 1.9E-19 4.1E-24 207.6 31.9 285 207-530 61-369 (380)
69 PRK08134 O-acetylhomoserine am 99.9 3.2E-20 6.9E-25 217.5 25.4 280 634-953 66-386 (433)
70 TIGR01328 met_gam_lyase methio 99.9 1.1E-20 2.4E-25 219.3 21.3 269 634-953 61-349 (391)
71 PRK07812 O-acetylhomoserine am 99.9 1.8E-20 4E-25 219.3 22.8 280 635-953 72-390 (436)
72 PLN02409 serine--glyoxylate am 99.9 1.8E-19 4E-24 210.0 30.4 323 170-529 12-368 (401)
73 PRK07504 O-succinylhomoserine 99.9 1.3E-20 2.9E-25 219.1 20.5 267 634-953 67-354 (398)
74 PRK05994 O-acetylhomoserine am 99.9 3.8E-20 8.2E-25 217.0 24.1 278 635-953 66-385 (427)
75 PRK08133 O-succinylhomoserine 99.9 1.5E-20 3.2E-25 218.2 20.5 266 634-953 63-349 (390)
76 KOG1359 Glycine C-acetyltransf 99.9 9.8E-21 2.1E-25 199.6 16.9 309 164-528 71-407 (417)
77 cd06451 AGAT_like Alanine-glyo 99.9 1.7E-19 3.7E-24 206.4 28.4 315 178-528 8-352 (356)
78 PRK08249 cystathionine gamma-s 99.9 1.7E-20 3.7E-25 218.0 20.0 267 634-953 66-352 (398)
79 PRK03080 phosphoserine aminotr 99.8 2.3E-19 5E-24 207.6 29.1 298 210-529 47-369 (378)
80 PRK06234 methionine gamma-lyas 99.8 2.6E-20 5.6E-25 216.9 21.0 267 635-952 67-355 (400)
81 PRK05939 hypothetical protein; 99.8 2.8E-20 6.1E-25 216.0 21.1 278 634-953 49-355 (397)
82 PLN02509 cystathionine beta-ly 99.8 2.5E-20 5.4E-25 219.0 20.2 267 633-953 134-420 (464)
83 PRK07810 O-succinylhomoserine 99.8 3.6E-20 7.8E-25 215.6 21.4 267 634-953 72-363 (403)
84 TIGR03812 tyr_de_CO2_Arch tyro 99.8 5.9E-19 1.3E-23 203.2 31.1 301 569-894 1-313 (373)
85 PRK08574 cystathionine gamma-s 99.8 3E-20 6.4E-25 215.2 20.3 266 634-953 55-343 (385)
86 TIGR01325 O_suc_HS_sulf O-succ 99.8 4.7E-20 1E-24 213.4 21.0 266 634-953 56-341 (380)
87 PRK08045 cystathionine gamma-s 99.8 5E-20 1.1E-24 213.3 21.1 267 634-953 54-341 (386)
88 KOG1383 Glutamate decarboxylas 99.8 4.8E-19 1E-23 198.4 27.9 297 559-889 54-373 (491)
89 TIGR01822 2am3keto_CoA 2-amino 99.8 2.5E-19 5.4E-24 207.9 26.7 312 168-529 46-385 (393)
90 PRK14012 cysteine desulfurase; 99.8 1.5E-18 3.2E-23 202.6 32.7 290 210-529 48-375 (404)
91 PRK08776 cystathionine gamma-s 99.8 7.4E-20 1.6E-24 213.0 21.5 267 634-953 62-349 (405)
92 TIGR02326 transamin_PhnW 2-ami 99.8 1.6E-18 3.4E-23 199.3 31.2 319 171-529 7-358 (363)
93 cd00614 CGS_like CGS_like: Cys 99.8 8.7E-20 1.9E-24 210.5 20.9 266 634-952 42-328 (369)
94 PRK06176 cystathionine gamma-s 99.8 5.9E-20 1.3E-24 212.3 19.4 265 634-953 52-337 (380)
95 TIGR01788 Glu-decarb-GAD gluta 99.8 1.7E-18 3.8E-23 202.3 31.8 345 139-529 15-425 (431)
96 COG0075 Serine-pyruvate aminot 99.8 1.3E-18 2.8E-23 196.9 29.6 325 170-529 8-359 (383)
97 PRK06084 O-acetylhomoserine am 99.8 2.2E-19 4.8E-24 210.2 24.3 279 635-953 61-381 (425)
98 PRK07811 cystathionine gamma-s 99.8 1E-19 2.2E-24 211.1 21.0 267 634-953 63-350 (388)
99 PLN03032 serine decarboxylase; 99.8 2.2E-18 4.7E-23 197.7 31.1 283 207-529 62-372 (374)
100 TIGR01329 cysta_beta_ly_E cyst 99.8 1.5E-19 3.2E-24 209.0 21.5 266 634-953 49-334 (378)
101 KOG0053 Cystathionine beta-lya 99.8 9.3E-20 2E-24 204.9 18.9 267 634-953 79-366 (409)
102 TIGR02080 O_succ_thio_ly O-suc 99.8 1.2E-19 2.6E-24 209.9 19.6 267 634-953 53-340 (382)
103 PRK07050 cystathionine beta-ly 99.8 1.7E-19 3.6E-24 209.6 20.4 264 635-952 68-354 (394)
104 PRK07671 cystathionine beta-ly 99.8 2.1E-19 4.6E-24 207.6 20.2 264 634-952 52-336 (377)
105 TIGR03235 DNA_S_dndA cysteine 99.8 4.7E-18 1E-22 194.6 30.8 262 207-500 38-319 (353)
106 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 5.2E-18 1.1E-22 195.8 31.3 284 205-528 45-363 (370)
107 PRK05937 8-amino-7-oxononanoat 99.8 1.5E-18 3.2E-23 200.3 26.4 316 165-529 9-346 (370)
108 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.4E-18 3E-23 203.6 25.8 278 635-953 60-378 (418)
109 PLN02242 methionine gamma-lyas 99.8 3.4E-19 7.3E-24 208.2 20.3 270 634-953 78-373 (418)
110 PLN03227 serine palmitoyltrans 99.8 2.4E-18 5.1E-23 200.0 27.1 310 164-529 2-378 (392)
111 PRK07503 methionine gamma-lyas 99.8 5.9E-19 1.3E-23 205.6 21.9 269 634-953 67-355 (403)
112 PRK13479 2-aminoethylphosphona 99.8 1.2E-17 2.5E-22 192.4 32.2 320 170-529 8-359 (368)
113 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 9.5E-18 2.1E-22 191.3 30.9 317 177-528 7-352 (355)
114 PTZ00094 serine hydroxymethylt 99.8 2.2E-18 4.9E-23 203.9 26.6 284 209-529 77-404 (452)
115 TIGR03811 tyr_de_CO2_Ent tyros 99.8 8.5E-18 1.8E-22 202.0 31.5 350 569-936 61-528 (608)
116 TIGR01821 5aminolev_synth 5-am 99.8 1.8E-18 3.8E-23 201.8 25.0 314 164-529 49-392 (402)
117 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1.2E-17 2.6E-22 193.9 31.1 284 207-529 59-377 (387)
118 PLN02651 cysteine desulfurase 99.8 1E-17 2.3E-22 192.7 29.8 241 628-895 39-287 (364)
119 PRK08064 cystathionine beta-ly 99.8 8.4E-19 1.8E-23 203.6 20.7 264 634-952 56-340 (390)
120 COG3844 Kynureninase [Amino ac 99.8 5.7E-18 1.2E-22 181.7 25.1 306 208-529 73-398 (407)
121 TIGR01366 serC_3 phosphoserine 99.8 8.9E-18 1.9E-22 193.1 28.5 326 172-529 8-356 (361)
122 PRK07179 hypothetical protein; 99.8 3.7E-18 8E-23 199.5 25.7 309 166-529 60-394 (407)
123 COG0112 GlyA Glycine/serine hy 99.8 1E-18 2.2E-23 193.1 19.4 241 632-911 72-323 (413)
124 PLN02483 serine palmitoyltrans 99.8 1.3E-17 2.9E-22 198.7 30.1 317 164-529 104-462 (489)
125 PLN02271 serine hydroxymethylt 99.8 5.7E-18 1.2E-22 198.0 25.8 259 630-912 192-475 (586)
126 PRK09295 bifunctional cysteine 99.8 2E-17 4.4E-22 193.1 30.4 240 627-889 62-320 (406)
127 PRK06460 hypothetical protein; 99.8 1.8E-18 3.8E-23 200.0 21.1 266 634-952 47-332 (376)
128 PRK13393 5-aminolevulinate syn 99.8 7.4E-18 1.6E-22 196.9 24.9 313 165-529 50-392 (406)
129 PRK06767 methionine gamma-lyas 99.8 2.5E-18 5.5E-23 199.4 20.2 267 635-953 64-344 (386)
130 PRK07269 cystathionine gamma-s 99.8 2.2E-18 4.9E-23 198.0 19.5 258 634-952 56-322 (364)
131 TIGR03531 selenium_SpcS O-phos 99.8 1.1E-17 2.4E-22 194.9 25.5 286 560-888 29-343 (444)
132 PRK09064 5-aminolevulinate syn 99.8 1E-17 2.2E-22 195.6 25.1 314 164-529 50-393 (407)
133 TIGR02006 IscS cysteine desulf 99.8 8.1E-17 1.7E-21 187.9 32.4 231 631-888 46-281 (402)
134 PRK07049 methionine gamma-lyas 99.8 7E-18 1.5E-22 197.8 22.7 270 635-953 86-385 (427)
135 cd06450 DOPA_deC_like DOPA dec 99.8 8.3E-18 1.8E-22 191.4 22.6 237 625-911 31-287 (345)
136 PRK13392 5-aminolevulinate syn 99.8 2.2E-17 4.7E-22 193.2 25.8 313 166-529 52-393 (410)
137 TIGR03392 FeS_syn_CsdA cystein 99.8 1.1E-16 2.3E-21 186.4 30.8 239 628-889 56-312 (398)
138 cd00611 PSAT_like Phosphoserin 99.8 2E-17 4.4E-22 189.9 24.0 317 177-529 7-352 (355)
139 TIGR01976 am_tr_V_VC1184 cyste 99.8 1.1E-16 2.4E-21 186.1 29.6 245 627-894 55-320 (397)
140 PF00266 Aminotran_5: Aminotra 99.8 4.8E-17 1E-21 187.6 26.0 262 627-912 38-319 (371)
141 KOG1360 5-aminolevulinate synt 99.8 6.5E-18 1.4E-22 184.5 17.4 312 167-528 178-519 (570)
142 TIGR01979 sufS cysteine desulf 99.8 1.5E-16 3.2E-21 185.4 30.2 248 630-894 60-321 (403)
143 PRK05968 hypothetical protein; 99.8 1.1E-17 2.4E-22 194.2 20.4 264 634-952 65-343 (389)
144 cd06453 SufS_like Cysteine des 99.8 1.6E-16 3.6E-21 183.0 29.6 263 627-911 38-316 (373)
145 TIGR01364 serC_1 phosphoserine 99.8 1.2E-16 2.7E-21 182.7 27.2 281 211-528 37-343 (349)
146 KOG1549 Cysteine desulfurase N 99.8 7.6E-17 1.7E-21 181.8 24.7 288 211-529 85-414 (428)
147 TIGR03402 FeS_nifS cysteine de 99.8 4.8E-16 1.1E-20 179.7 32.1 231 628-888 38-273 (379)
148 cd06450 DOPA_deC_like DOPA dec 99.8 8.2E-17 1.8E-21 183.3 24.8 264 205-529 32-344 (345)
149 cd06454 KBL_like KBL_like; thi 99.8 1.8E-16 3.8E-21 180.5 26.6 276 206-528 41-346 (349)
150 TIGR03403 nifS_epsilon cystein 99.7 1.1E-15 2.3E-20 177.1 33.0 229 633-888 43-277 (382)
151 PLN02822 serine palmitoyltrans 99.7 1.7E-16 3.7E-21 188.9 26.8 279 203-529 146-473 (481)
152 PRK07582 cystathionine gamma-l 99.7 2.6E-17 5.6E-22 189.6 19.2 241 635-926 54-315 (366)
153 PRK05355 3-phosphoserine/phosp 99.7 1.4E-16 3.1E-21 183.0 25.2 318 171-529 7-354 (360)
154 PRK13034 serine hydroxymethylt 99.7 2.9E-16 6.2E-21 184.0 28.2 283 204-529 64-388 (416)
155 TIGR03235 DNA_S_dndA cysteine 99.7 5.3E-16 1.1E-20 177.7 29.7 237 630-893 40-285 (353)
156 PF00464 SHMT: Serine hydroxym 99.7 2E-17 4.4E-22 189.2 17.8 242 632-912 66-340 (399)
157 PLN02855 Bifunctional selenocy 99.7 6E-16 1.3E-20 181.9 30.3 236 630-888 74-327 (424)
158 cd06451 AGAT_like Alanine-glyo 99.7 1.5E-16 3.3E-21 182.0 24.4 244 629-893 29-283 (356)
159 TIGR01977 am_tr_V_EF2568 cyste 99.7 6.8E-16 1.5E-20 178.0 29.3 239 629-893 41-295 (376)
160 PRK08247 cystathionine gamma-s 99.7 7.3E-17 1.6E-21 186.0 21.0 260 634-952 54-322 (366)
161 TIGR03576 pyridox_MJ0158 pyrid 99.7 9.1E-16 2E-20 175.4 29.7 311 151-530 8-344 (346)
162 PRK14012 cysteine desulfurase; 99.7 1.5E-15 3.3E-20 177.3 31.9 230 632-888 49-283 (404)
163 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 1.7E-15 3.6E-20 174.2 31.6 278 211-528 44-357 (361)
164 PRK10874 cysteine sulfinate de 99.7 1E-15 2.2E-20 178.4 30.2 240 627-889 58-315 (401)
165 PRK06434 cystathionine gamma-l 99.7 6.2E-17 1.3E-21 186.8 19.4 263 634-953 66-343 (384)
166 PTZ00094 serine hydroxymethylt 99.7 3.4E-16 7.4E-21 185.4 26.1 301 571-910 20-341 (452)
167 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 8.7E-17 1.9E-21 184.7 20.3 265 211-518 66-416 (417)
168 PRK08114 cystathionine beta-ly 99.7 9.9E-16 2.1E-20 176.9 28.7 211 215-468 66-284 (395)
169 PRK13580 serine hydroxymethylt 99.7 3.9E-16 8.5E-21 182.3 25.4 253 628-912 91-379 (493)
170 COG0076 GadB Glutamate decarbo 99.7 9.2E-16 2E-20 180.1 28.2 326 139-502 31-403 (460)
171 PLN02409 serine--glyoxylate am 99.7 4.1E-16 8.9E-21 182.0 24.6 243 628-894 38-298 (401)
172 PRK02948 cysteine desulfurase; 99.7 2.3E-15 5E-20 174.2 30.7 236 629-895 40-283 (381)
173 PRK06939 2-amino-3-ketobutyrat 99.7 9E-16 2E-20 178.0 27.1 278 204-528 80-388 (397)
174 COG0075 Serine-pyruvate aminot 99.7 2E-16 4.3E-21 179.2 20.9 242 629-894 35-290 (383)
175 cd00609 AAT_like Aspartate ami 99.7 2.2E-15 4.7E-20 170.6 29.5 304 172-528 4-349 (350)
176 KOG1549 Cysteine desulfurase N 99.7 3.3E-16 7.2E-21 176.7 22.4 173 628-813 79-257 (428)
177 PRK06767 methionine gamma-lyas 99.7 1E-15 2.2E-20 177.7 26.7 272 214-527 64-383 (386)
178 TIGR01814 kynureninase kynuren 99.7 1.3E-15 2.8E-20 178.1 26.7 234 632-889 71-328 (406)
179 cd00614 CGS_like CGS_like: Cys 99.7 3.9E-15 8.4E-20 171.9 29.8 214 212-468 41-261 (369)
180 PRK15029 arginine decarboxylas 99.7 8.4E-16 1.8E-20 188.1 25.0 277 211-528 205-599 (755)
181 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 6.9E-16 1.5E-20 179.3 22.8 171 633-819 64-241 (387)
182 TIGR01437 selA_rel uncharacter 99.7 2E-15 4.3E-20 173.9 26.0 297 180-529 25-361 (363)
183 PRK05968 hypothetical protein; 99.7 1.4E-15 3E-20 176.8 24.5 273 213-528 65-385 (389)
184 cd00616 AHBA_syn 3-amino-5-hyd 99.7 2.9E-15 6.4E-20 170.9 26.6 280 212-528 19-352 (352)
185 PRK13580 serine hydroxymethylt 99.7 1.6E-15 3.5E-20 177.2 24.5 275 216-529 100-441 (493)
186 PLN02263 serine decarboxylase 99.7 1.5E-14 3.3E-19 168.7 32.3 334 151-530 76-440 (470)
187 TIGR01324 cysta_beta_ly_B cyst 99.7 3.8E-15 8.3E-20 172.1 26.8 211 214-467 53-269 (377)
188 TIGR00858 bioF 8-amino-7-oxono 99.7 4.6E-15 1E-19 169.4 27.2 274 207-528 57-360 (360)
189 PRK08064 cystathionine beta-ly 99.7 2.8E-15 6E-20 174.2 25.7 273 213-529 56-382 (390)
190 PRK09028 cystathionine beta-ly 99.7 1.3E-14 2.8E-19 168.0 30.7 210 215-467 65-280 (394)
191 TIGR01329 cysta_beta_ly_E cyst 99.7 5E-15 1.1E-19 171.4 27.1 272 213-528 49-374 (378)
192 TIGR02326 transamin_PhnW 2-ami 99.7 4.6E-15 9.9E-20 170.6 26.1 245 629-893 32-288 (363)
193 TIGR01328 met_gam_lyase methio 99.7 8.5E-15 1.9E-19 170.2 27.9 214 214-468 62-281 (391)
194 PLN02590 probable tyrosine dec 99.7 1E-14 2.2E-19 174.0 28.8 362 139-529 101-528 (539)
195 cd00615 Orn_deC_like Ornithine 99.7 5.4E-16 1.2E-20 173.5 16.7 224 633-888 60-294 (294)
196 TIGR01825 gly_Cac_T_rel pyrido 99.7 7.7E-15 1.7E-19 169.8 26.1 277 205-529 72-377 (385)
197 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 7.9E-15 1.7E-19 169.4 26.0 176 629-820 48-230 (370)
198 TIGR01141 hisC histidinol-phos 99.7 2.4E-14 5.3E-19 163.4 28.9 298 172-528 25-346 (346)
199 cd06502 TA_like Low-specificit 99.7 6.5E-15 1.4E-19 167.1 23.6 271 213-528 34-336 (338)
200 PRK06234 methionine gamma-lyas 99.7 1.4E-14 3E-19 168.9 26.1 274 214-528 67-396 (400)
201 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 5.4E-15 1.2E-19 170.0 22.3 170 634-819 46-222 (361)
202 PRK08133 O-succinylhomoserine 99.7 1.8E-14 3.9E-19 167.5 26.7 213 213-468 63-281 (390)
203 PRK07582 cystathionine gamma-l 99.7 2.4E-14 5.2E-19 165.1 27.6 271 214-528 54-364 (366)
204 PLN02880 tyrosine decarboxylas 99.7 2.9E-14 6.2E-19 169.8 28.9 357 140-529 54-480 (490)
205 cd00378 SHMT Serine-glycine hy 99.7 1.1E-14 2.4E-19 169.7 25.0 244 629-911 62-318 (402)
206 PRK08134 O-acetylhomoserine am 99.7 1.2E-14 2.6E-19 170.7 25.2 142 213-360 66-213 (433)
207 PRK05958 8-amino-7-oxononanoat 99.7 3.3E-14 7.2E-19 164.1 28.3 277 205-529 78-383 (385)
208 TIGR01325 O_suc_HS_sulf O-succ 99.7 1.8E-14 3.9E-19 166.9 26.1 213 213-468 56-274 (380)
209 cd00378 SHMT Serine-glycine hy 99.7 1.5E-14 3.1E-19 168.7 25.5 277 211-529 64-381 (402)
210 PRK06176 cystathionine gamma-s 99.6 2.6E-14 5.6E-19 165.5 26.4 212 213-468 52-270 (380)
211 PRK13578 ornithine decarboxyla 99.6 6.5E-15 1.4E-19 178.6 22.2 281 211-528 174-560 (720)
212 TIGR00474 selA seryl-tRNA(sec) 99.6 4.9E-14 1.1E-18 165.7 28.8 303 180-527 93-453 (454)
213 PRK07504 O-succinylhomoserine 99.6 3.1E-14 6.7E-19 165.9 26.7 212 214-468 68-286 (398)
214 TIGR03301 PhnW-AepZ 2-aminoeth 99.6 2.8E-14 6.1E-19 162.7 25.8 244 630-895 29-285 (355)
215 PRK04311 selenocysteine syntha 99.6 4.6E-14 1E-18 166.3 28.1 305 180-528 98-459 (464)
216 TIGR00474 selA seryl-tRNA(sec) 99.6 2.3E-15 4.9E-20 176.9 16.9 223 632-888 122-370 (454)
217 PLN03226 serine hydroxymethylt 99.6 3.5E-14 7.6E-19 168.4 26.7 253 633-911 81-353 (475)
218 PRK08248 O-acetylhomoserine am 99.6 2.1E-14 4.6E-19 168.6 24.3 142 214-361 67-214 (431)
219 PRK00011 glyA serine hydroxyme 99.6 5.2E-14 1.1E-18 165.0 27.5 272 216-529 76-385 (416)
220 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 5.5E-14 1.2E-18 162.2 27.1 212 214-468 58-278 (386)
221 PRK00011 glyA serine hydroxyme 99.6 2.7E-14 5.8E-19 167.4 24.8 235 637-910 76-321 (416)
222 PRK07050 cystathionine beta-ly 99.6 2.9E-14 6.4E-19 165.8 24.4 212 214-468 68-286 (394)
223 PRK08249 cystathionine gamma-s 99.6 1.1E-13 2.4E-18 161.2 28.9 213 213-468 66-284 (398)
224 COG0436 Aspartate/tyrosine/aro 99.6 4.2E-14 9E-19 164.2 25.2 308 570-924 11-345 (393)
225 PRK13479 2-aminoethylphosphona 99.6 3.8E-14 8.1E-19 163.3 24.6 247 630-895 35-291 (368)
226 PRK07810 O-succinylhomoserine 99.6 5.7E-14 1.2E-18 163.8 26.2 212 214-468 73-291 (403)
227 PLN02509 cystathionine beta-ly 99.6 4.8E-14 1E-18 166.2 25.6 212 213-468 135-353 (464)
228 PLN02242 methionine gamma-lyas 99.6 6.9E-14 1.5E-18 163.8 26.8 217 213-470 78-302 (418)
229 PRK05967 cystathionine beta-ly 99.6 4.4E-14 9.6E-19 163.4 24.6 210 215-467 68-283 (395)
230 KOG2862 Alanine-glyoxylate ami 99.6 1.4E-13 3.1E-18 147.4 26.4 325 169-529 19-378 (385)
231 TIGR03799 NOD_PanD_pyr putativ 99.6 1.4E-13 3.1E-18 164.5 29.5 294 206-526 124-518 (522)
232 TIGR01437 selA_rel uncharacter 99.6 4.6E-14 1E-18 162.6 24.6 168 632-819 45-229 (363)
233 PRK04311 selenocysteine syntha 99.6 2.7E-14 5.9E-19 168.3 23.0 220 633-889 128-376 (464)
234 PRK07811 cystathionine gamma-s 99.6 1.5E-13 3.2E-18 159.7 28.9 213 213-468 63-282 (388)
235 PRK08861 cystathionine gamma-s 99.6 7.4E-14 1.6E-18 161.8 26.1 212 214-468 56-274 (388)
236 PRK07812 O-acetylhomoserine am 99.6 6.1E-14 1.3E-18 164.7 25.5 140 215-360 73-219 (436)
237 cd06502 TA_like Low-specificit 99.6 1.7E-14 3.6E-19 163.8 19.9 220 634-888 34-266 (338)
238 COG4992 ArgD Ornithine/acetylo 99.6 1.2E-14 2.5E-19 163.5 18.1 246 589-888 51-322 (404)
239 PRK08574 cystathionine gamma-s 99.6 1E-13 2.2E-18 160.9 26.3 212 213-468 55-273 (385)
240 PRK05613 O-acetylhomoserine am 99.6 6.6E-14 1.4E-18 164.4 24.8 145 213-363 71-221 (437)
241 TIGR03531 selenium_SpcS O-phos 99.6 2.9E-13 6.3E-18 158.1 29.5 342 139-528 28-441 (444)
242 PRK06702 O-acetylhomoserine am 99.6 1.1E-13 2.3E-18 161.9 25.3 143 213-361 63-212 (432)
243 PLN03226 serine hydroxymethylt 99.6 1.3E-13 2.9E-18 163.5 26.5 285 217-529 86-415 (475)
244 PRK07503 methionine gamma-lyas 99.6 3.6E-13 7.9E-18 157.2 29.7 162 213-383 67-234 (403)
245 PRK08247 cystathionine gamma-s 99.6 1.5E-13 3.3E-18 158.6 26.2 228 213-484 54-289 (366)
246 cd00616 AHBA_syn 3-amino-5-hyd 99.6 7.1E-14 1.5E-18 159.5 23.1 262 633-924 19-290 (352)
247 PRK07671 cystathionine beta-ly 99.6 1.7E-13 3.7E-18 158.6 26.3 212 213-468 52-270 (377)
248 COG0626 MetC Cystathionine bet 99.6 2.2E-13 4.8E-18 155.7 26.7 143 213-361 65-214 (396)
249 PRK07269 cystathionine gamma-s 99.6 2.6E-13 5.7E-18 156.2 27.0 227 214-484 57-289 (364)
250 PRK06084 O-acetylhomoserine am 99.6 1.7E-13 3.8E-18 160.7 25.1 154 215-377 62-221 (425)
251 PRK06460 hypothetical protein; 99.6 5.6E-13 1.2E-17 154.3 28.8 213 212-467 46-264 (376)
252 PRK05994 O-acetylhomoserine am 99.6 3E-13 6.5E-18 159.0 26.8 152 214-374 66-223 (427)
253 COG2873 MET17 O-acetylhomoseri 99.6 2.9E-13 6.2E-18 148.7 24.6 140 216-361 67-212 (426)
254 PRK15399 lysine decarboxylase 99.6 2.1E-13 4.7E-18 165.4 26.0 271 211-528 195-554 (713)
255 cd00609 AAT_like Aspartate ami 99.6 8E-14 1.7E-18 157.8 21.0 228 627-889 35-278 (350)
256 PRK08045 cystathionine gamma-s 99.6 5.2E-13 1.1E-17 155.0 28.1 272 214-528 55-381 (386)
257 PRK13034 serine hydroxymethylt 99.6 2.4E-13 5.3E-18 159.4 25.2 242 632-911 70-325 (416)
258 PRK15400 lysine decarboxylase 99.6 1.2E-13 2.6E-18 167.7 23.0 272 211-528 195-554 (714)
259 PRK08776 cystathionine gamma-s 99.6 6.2E-13 1.4E-17 155.2 28.2 212 214-468 63-281 (405)
260 PLN02721 threonine aldolase 99.6 2.7E-13 5.8E-18 154.9 24.5 273 213-529 42-348 (353)
261 PLN02724 Molybdenum cofactor s 99.6 9.6E-14 2.1E-18 174.9 21.9 242 627-889 73-359 (805)
262 cd01494 AAT_I Aspartate aminot 99.6 1.3E-13 2.9E-18 139.1 17.7 161 634-812 2-170 (170)
263 PRK03080 phosphoserine aminotr 99.5 2.3E-13 5.1E-18 157.7 21.5 227 630-888 46-290 (378)
264 TIGR02080 O_succ_thio_ly O-suc 99.5 1.6E-12 3.5E-17 150.7 28.3 212 214-468 54-272 (382)
265 PRK02731 histidinol-phosphate 99.5 2.1E-12 4.6E-17 148.7 29.1 265 214-529 70-362 (367)
266 PF00282 Pyridoxal_deC: Pyrido 99.5 2.8E-13 6.1E-18 156.3 21.7 313 139-482 10-372 (373)
267 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 2.2E-14 4.8E-19 165.0 12.3 223 633-887 67-315 (417)
268 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 1.3E-12 2.8E-17 153.4 27.1 142 214-361 60-207 (418)
269 KOG0629 Glutamate decarboxylas 99.5 1.7E-13 3.7E-18 152.0 18.3 261 625-897 134-423 (510)
270 PRK13238 tnaA tryptophanase/L- 99.5 1.8E-12 3.9E-17 153.5 28.2 291 572-911 23-354 (460)
271 KOG0257 Kynurenine aminotransf 99.5 5.8E-13 1.3E-17 148.9 21.9 281 572-893 18-331 (420)
272 PRK11658 UDP-4-amino-4-deoxy-L 99.5 1E-12 2.2E-17 152.4 25.0 287 213-528 35-374 (379)
273 PRK11658 UDP-4-amino-4-deoxy-L 99.5 6E-13 1.3E-17 154.3 22.9 263 634-924 35-314 (379)
274 PRK05939 hypothetical protein; 99.5 2.3E-12 4.9E-17 150.1 27.7 142 213-361 49-196 (397)
275 COG1982 LdcC Arginine/lysine/o 99.5 4.5E-13 9.9E-18 156.8 21.7 278 212-529 71-404 (557)
276 KOG0053 Cystathionine beta-lya 99.5 8.6E-13 1.9E-17 149.1 22.5 161 214-383 80-247 (409)
277 cd06454 KBL_like KBL_like; thi 99.5 7.3E-13 1.6E-17 150.9 22.2 220 629-888 43-272 (349)
278 PRK06108 aspartate aminotransf 99.5 1.6E-12 3.5E-17 150.4 25.3 276 573-889 12-305 (382)
279 PRK15407 lipopolysaccharide bi 99.5 7.9E-13 1.7E-17 155.7 23.0 332 568-924 2-368 (438)
280 TIGR01141 hisC histidinol-phos 99.5 4.8E-13 1E-17 152.7 20.5 216 635-889 57-280 (346)
281 cd00615 Orn_deC_like Ornithine 99.5 1E-13 2.2E-18 155.2 14.6 153 212-378 60-236 (294)
282 KOG1383 Glutamate decarboxylas 99.5 3.7E-12 7.9E-17 143.7 26.8 352 139-529 54-442 (491)
283 PRK06434 cystathionine gamma-l 99.5 2.4E-12 5.2E-17 148.9 26.0 210 213-467 66-281 (384)
284 PRK05387 histidinol-phosphate 99.5 5.1E-12 1.1E-16 144.7 28.1 268 215-528 64-348 (353)
285 TIGR01822 2am3keto_CoA 2-amino 99.5 8.3E-13 1.8E-17 153.4 21.4 227 627-892 78-316 (393)
286 PLN02271 serine hydroxymethylt 99.5 1.8E-12 4E-17 152.2 24.1 291 216-528 199-535 (586)
287 TIGR01365 serC_2 phosphoserine 99.5 4.4E-12 9.5E-17 145.9 26.9 294 210-528 38-368 (374)
288 PRK09082 methionine aminotrans 99.5 1.3E-12 2.9E-17 151.7 22.9 274 573-888 19-308 (386)
289 TIGR03588 PseC UDP-4-keto-6-de 99.5 2.4E-12 5.3E-17 149.2 24.9 289 213-528 31-377 (380)
290 PLN00175 aminotransferase fami 99.5 3.5E-12 7.6E-17 149.6 26.5 276 573-889 43-332 (413)
291 PRK07179 hypothetical protein; 99.5 3.8E-12 8.2E-17 149.0 25.8 219 633-893 100-327 (407)
292 PRK06225 aspartate aminotransf 99.5 1.8E-11 3.9E-16 141.9 31.0 304 171-529 33-372 (380)
293 PRK05957 aspartate aminotransf 99.5 3.8E-12 8.3E-17 148.1 25.5 263 590-888 28-305 (389)
294 KOG1357 Serine palmitoyltransf 99.5 1.1E-12 2.3E-17 146.8 19.4 313 168-530 144-499 (519)
295 PLN02721 threonine aldolase 99.5 1.8E-12 3.9E-17 148.0 22.0 170 634-818 42-227 (353)
296 PRK07505 hypothetical protein; 99.5 1.2E-11 2.6E-16 144.5 29.0 316 164-528 45-394 (402)
297 TIGR03588 PseC UDP-4-keto-6-de 99.5 3E-12 6.5E-17 148.5 23.3 266 635-924 32-317 (380)
298 PRK06108 aspartate aminotransf 99.5 2.1E-11 4.5E-16 141.1 30.2 278 207-528 61-377 (382)
299 PRK05764 aspartate aminotransf 99.5 7.6E-12 1.6E-16 145.5 26.1 260 590-889 32-311 (393)
300 PRK07777 aminotransferase; Val 99.5 7.8E-12 1.7E-16 145.3 25.3 232 627-892 60-309 (387)
301 PRK05957 aspartate aminotransf 99.5 3.5E-11 7.7E-16 140.0 30.7 307 170-528 31-380 (389)
302 PF00155 Aminotran_1_2: Aminot 99.5 7.4E-12 1.6E-16 143.6 24.7 268 215-527 48-363 (363)
303 PRK08960 hypothetical protein; 99.5 1.1E-11 2.3E-16 144.1 26.0 213 589-818 32-255 (387)
304 PRK00854 rocD ornithine--oxo-a 99.5 1.7E-11 3.6E-16 143.2 27.2 276 211-528 83-396 (401)
305 PRK08361 aspartate aminotransf 99.5 4.9E-12 1.1E-16 147.2 22.6 261 590-888 34-311 (391)
306 PRK09105 putative aminotransfe 99.5 2.9E-11 6.3E-16 139.9 28.8 264 213-528 80-365 (370)
307 PRK06207 aspartate aminotransf 99.5 9.8E-12 2.1E-16 145.5 25.2 230 627-889 77-324 (405)
308 KOG2862 Alanine-glyoxylate ami 99.4 3.9E-12 8.5E-17 136.5 19.5 233 630-891 48-304 (385)
309 TIGR01821 5aminolev_synth 5-am 99.4 9.6E-12 2.1E-16 145.3 24.6 224 631-892 89-322 (402)
310 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 5.1E-12 1.1E-16 146.4 21.9 266 633-924 32-310 (375)
311 PRK07682 hypothetical protein; 99.4 5.7E-12 1.2E-16 145.9 22.2 261 590-889 21-299 (378)
312 PRK03158 histidinol-phosphate 99.4 3.5E-11 7.7E-16 138.2 28.1 264 214-528 67-356 (359)
313 PRK12414 putative aminotransfe 99.4 4E-12 8.8E-17 147.6 20.3 224 573-819 18-257 (384)
314 PRK05937 8-amino-7-oxononanoat 99.4 3.3E-12 7.2E-17 147.6 19.4 167 625-813 49-226 (370)
315 PRK08912 hypothetical protein; 99.4 1.9E-11 4E-16 142.1 25.7 211 590-818 27-253 (387)
316 PF01041 DegT_DnrJ_EryC1: DegT 99.4 9.9E-12 2.1E-16 143.3 23.1 262 633-924 26-300 (363)
317 TIGR02379 ECA_wecE TDP-4-keto- 99.4 1.6E-11 3.5E-16 142.1 24.9 265 633-924 32-311 (376)
318 PRK05942 aspartate aminotransf 99.4 1.9E-11 4.1E-16 142.5 25.6 261 591-888 37-315 (394)
319 PRK07908 hypothetical protein; 99.4 3.5E-11 7.5E-16 137.9 27.3 297 172-528 28-342 (349)
320 PRK06225 aspartate aminotransf 99.4 1.1E-11 2.3E-16 143.8 23.3 170 635-819 69-247 (380)
321 PRK07550 hypothetical protein; 99.4 1.8E-11 4E-16 142.1 25.4 226 571-818 15-257 (386)
322 PRK07324 transaminase; Validat 99.4 9.6E-12 2.1E-16 143.9 22.8 220 573-819 11-244 (373)
323 TIGR03537 DapC succinyldiamino 99.4 1.7E-11 3.6E-16 140.6 24.4 180 627-818 35-227 (350)
324 TIGR03537 DapC succinyldiamino 99.4 9E-11 1.9E-15 134.6 30.3 268 217-528 42-348 (350)
325 PRK07309 aromatic amino acid a 99.4 2.6E-11 5.6E-16 141.3 26.1 215 590-819 31-259 (391)
326 PRK07049 methionine gamma-lyas 99.4 3.4E-11 7.4E-16 141.6 27.1 211 215-468 87-315 (427)
327 PRK00854 rocD ornithine--oxo-a 99.4 2.3E-11 5E-16 142.0 25.5 221 633-889 84-327 (401)
328 COG0399 WecE Predicted pyridox 99.4 1.3E-11 2.9E-16 140.4 22.7 258 634-924 36-306 (374)
329 TIGR03540 DapC_direct LL-diami 99.4 2.8E-11 6E-16 140.4 26.0 261 590-889 30-310 (383)
330 PRK06939 2-amino-3-ketobutyrat 99.4 5.4E-12 1.2E-16 146.4 20.0 228 626-892 81-320 (397)
331 PRK14807 histidinol-phosphate 99.4 1.2E-10 2.7E-15 133.5 30.5 297 171-528 27-347 (351)
332 COG1103 Archaea-specific pyrid 99.4 3.9E-11 8.4E-16 126.5 23.5 225 634-888 63-297 (382)
333 PRK09082 methionine aminotrans 99.4 8.7E-11 1.9E-15 136.5 29.0 322 153-528 19-384 (386)
334 PRK15029 arginine decarboxylas 99.4 4.2E-12 9E-17 155.9 18.7 153 633-796 206-389 (755)
335 PRK07337 aminotransferase; Val 99.4 2.4E-11 5.3E-16 141.2 24.2 210 590-818 31-253 (388)
336 PRK05958 8-amino-7-oxononanoat 99.4 2.7E-11 5.9E-16 139.9 24.4 225 628-892 80-314 (385)
337 PF01041 DegT_DnrJ_EryC1: DegT 99.4 2.6E-11 5.6E-16 139.9 24.0 281 212-528 26-363 (363)
338 PRK03244 argD acetylornithine 99.4 1.5E-10 3.2E-15 135.1 30.7 274 214-529 88-390 (398)
339 PRK00950 histidinol-phosphate 99.4 7.5E-11 1.6E-15 135.5 27.7 262 214-528 72-357 (361)
340 PRK14807 histidinol-phosphate 99.4 3E-11 6.5E-16 138.6 24.2 216 635-888 62-281 (351)
341 TIGR01140 L_thr_O3P_dcar L-thr 99.4 5.6E-11 1.2E-15 135.2 26.1 261 214-528 50-330 (330)
342 PRK04635 histidinol-phosphate 99.4 3.2E-11 7E-16 138.5 24.1 265 215-529 64-351 (354)
343 PRK04073 rocD ornithine--oxo-a 99.4 7.9E-11 1.7E-15 137.4 27.7 275 212-528 83-392 (396)
344 PRK09147 succinyldiaminopimela 99.4 5.2E-11 1.1E-15 138.9 26.2 216 589-818 29-266 (396)
345 PRK07681 aspartate aminotransf 99.4 5.6E-11 1.2E-15 138.8 26.4 233 628-893 69-317 (399)
346 PRK08056 threonine-phosphate d 99.4 1.3E-10 2.8E-15 133.6 29.0 296 172-528 26-350 (356)
347 PRK05764 aspartate aminotransf 99.4 7.9E-11 1.7E-15 137.0 27.5 266 215-528 72-386 (393)
348 TIGR03540 DapC_direct LL-diami 99.4 3.3E-10 7.2E-15 131.4 32.6 269 215-528 71-381 (383)
349 PRK07681 aspartate aminotransf 99.4 9.6E-11 2.1E-15 136.8 27.6 267 216-529 74-384 (399)
350 COG1103 Archaea-specific pyrid 99.4 6.4E-11 1.4E-15 124.9 23.0 304 180-529 29-376 (382)
351 PLN03227 serine palmitoyltrans 99.4 1.1E-11 2.4E-16 144.3 19.5 213 633-888 44-280 (392)
352 PRK07865 N-succinyldiaminopime 99.4 3.8E-10 8.3E-15 130.1 31.8 254 226-528 84-363 (364)
353 TIGR00858 bioF 8-amino-7-oxono 99.4 5.4E-11 1.2E-15 135.9 24.5 220 629-888 58-287 (360)
354 COG2008 GLY1 Threonine aldolas 99.4 7.7E-12 1.7E-16 138.5 16.6 242 632-911 35-291 (342)
355 KOG2467 Glycine/serine hydroxy 99.4 2.4E-11 5.1E-16 132.8 19.9 304 580-924 46-376 (477)
356 PRK07324 transaminase; Validat 99.4 1.4E-10 3.1E-15 134.2 28.1 270 215-528 66-365 (373)
357 PRK13392 5-aminolevulinate syn 99.4 4.4E-11 9.5E-16 140.1 23.9 222 633-892 92-323 (410)
358 TIGR02618 tyr_phenol_ly tyrosi 99.4 3E-11 6.6E-16 139.8 21.9 239 634-910 73-346 (450)
359 PRK06290 aspartate aminotransf 99.4 1.1E-10 2.3E-15 137.0 26.9 278 569-889 25-323 (410)
360 PRK09276 LL-diaminopimelate am 99.4 7.7E-11 1.7E-15 136.8 25.5 263 591-889 33-312 (385)
361 TIGR01825 gly_Cac_T_rel pyrido 99.4 4.9E-11 1.1E-15 138.1 23.8 227 627-893 73-309 (385)
362 PRK01533 histidinol-phosphate 99.4 8.8E-11 1.9E-15 135.6 25.7 296 171-528 34-350 (366)
363 PRK05355 3-phosphoserine/phosp 99.4 1.2E-11 2.7E-16 142.3 18.5 224 629-888 45-280 (360)
364 TIGR03246 arg_catab_astC succi 99.4 4.6E-11 1E-15 139.4 23.5 246 592-888 47-317 (397)
365 PF01212 Beta_elim_lyase: Beta 99.4 2.3E-12 5.1E-17 143.4 11.9 231 632-894 29-276 (290)
366 KOG1358 Serine palmitoyltransf 99.4 1.4E-11 3.1E-16 135.8 17.6 315 166-529 100-461 (467)
367 PRK04870 histidinol-phosphate 99.4 2.2E-10 4.8E-15 131.5 28.6 299 171-528 31-353 (356)
368 PLN03026 histidinol-phosphate 99.4 3.5E-10 7.7E-15 131.3 30.2 263 215-528 90-377 (380)
369 PRK00950 histidinol-phosphate 99.4 1E-11 2.3E-16 142.6 17.0 169 635-818 72-244 (361)
370 PRK08068 transaminase; Reviewe 99.4 9.2E-11 2E-15 136.4 25.0 259 590-888 33-312 (389)
371 PLN02656 tyrosine transaminase 99.4 4.7E-11 1E-15 139.9 22.6 207 589-812 31-256 (409)
372 PRK07568 aspartate aminotransf 99.4 5E-10 1.1E-14 130.5 30.9 302 171-528 35-387 (397)
373 PLN02452 phosphoserine transam 99.4 1.3E-10 2.7E-15 133.8 25.4 282 210-528 51-358 (365)
374 PRK08153 histidinol-phosphate 99.4 2.6E-10 5.7E-15 131.8 28.1 298 171-529 37-361 (369)
375 PLN00145 tyrosine/nicotianamin 99.4 1.9E-10 4.1E-15 135.7 27.3 206 589-812 52-277 (430)
376 PRK04073 rocD ornithine--oxo-a 99.4 5.1E-11 1.1E-15 139.0 22.3 250 592-888 52-325 (396)
377 PRK07777 aminotransferase; Val 99.3 6.9E-10 1.5E-14 129.0 31.5 264 220-528 74-381 (387)
378 PRK12414 putative aminotransfe 99.3 4.7E-10 1E-14 130.4 30.1 303 171-528 34-382 (384)
379 PRK06348 aspartate aminotransf 99.3 1.8E-10 4E-15 133.7 26.2 178 627-818 65-255 (384)
380 PRK09276 LL-diaminopimelate am 99.3 3.9E-10 8.5E-15 130.9 28.9 267 215-528 73-383 (385)
381 PRK07550 hypothetical protein; 99.3 9.1E-10 2E-14 128.0 31.8 327 151-529 15-383 (386)
382 TIGR03539 DapC_actino succinyl 99.3 9.1E-10 2E-14 126.7 31.3 273 207-527 56-356 (357)
383 PRK08361 aspartate aminotransf 99.3 1.9E-10 4E-15 134.0 25.9 267 216-528 75-385 (391)
384 PRK10534 L-threonine aldolase; 99.3 2.4E-10 5.2E-15 129.9 26.1 287 181-528 13-328 (333)
385 cd00610 OAT_like Acetyl ornith 99.3 2.5E-10 5.3E-15 133.5 26.8 280 210-528 78-410 (413)
386 PRK08960 hypothetical protein; 99.3 7.7E-10 1.7E-14 128.7 30.6 305 170-528 36-382 (387)
387 PRK09148 aminotransferase; Val 99.3 1.3E-10 2.8E-15 136.1 24.2 262 590-888 31-310 (405)
388 PRK03321 putative aminotransfe 99.3 3.8E-11 8.3E-16 137.6 19.5 170 635-819 60-238 (352)
389 PRK03321 putative aminotransfe 99.3 3.4E-10 7.5E-15 129.7 27.0 264 213-528 59-346 (352)
390 COG0436 Aspartate/tyrosine/aro 99.3 6.6E-10 1.4E-14 129.3 29.6 307 171-528 33-386 (393)
391 PRK07682 hypothetical protein; 99.3 5.4E-10 1.2E-14 129.4 28.8 268 216-528 62-371 (378)
392 PRK08912 hypothetical protein; 99.3 7.8E-10 1.7E-14 128.6 30.1 268 216-528 68-381 (387)
393 TIGR03538 DapC_gpp succinyldia 99.3 1.8E-10 4E-15 134.2 24.8 213 589-818 28-265 (393)
394 PTZ00125 ornithine aminotransf 99.3 6.1E-10 1.3E-14 129.9 29.0 277 212-529 74-391 (400)
395 PRK01688 histidinol-phosphate 99.3 1.8E-10 3.9E-15 132.2 24.1 266 215-528 61-351 (351)
396 COG0399 WecE Predicted pyridox 99.3 2.1E-10 4.7E-15 130.6 24.1 288 191-528 26-368 (374)
397 PRK07568 aspartate aminotransf 99.3 3E-10 6.6E-15 132.3 26.0 227 627-889 65-308 (397)
398 cd00617 Tnase_like Tryptophana 99.3 1.4E-10 3.1E-15 135.9 23.2 240 635-911 56-329 (431)
399 cd01494 AAT_I Aspartate aminot 99.3 4.1E-11 8.9E-16 120.9 16.3 150 213-376 2-170 (170)
400 PRK09105 putative aminotransfe 99.3 2.3E-10 5E-15 132.4 24.5 219 634-892 80-306 (370)
401 PLN00175 aminotransferase fami 99.3 1.1E-09 2.3E-14 128.7 30.4 260 222-528 106-408 (413)
402 PRK07683 aminotransferase A; V 99.3 2.6E-10 5.7E-15 132.6 25.0 262 590-888 29-305 (387)
403 PRK05166 histidinol-phosphate 99.3 1.1E-09 2.3E-14 126.8 29.9 296 172-528 42-366 (371)
404 TIGR03246 arg_catab_astC succi 99.3 5.3E-10 1.2E-14 130.6 27.4 276 212-529 78-391 (397)
405 TIGR01885 Orn_aminotrans ornit 99.3 4.1E-10 8.9E-15 131.6 26.4 276 211-529 79-398 (401)
406 PF00155 Aminotran_1_2: Aminot 99.3 5.2E-11 1.1E-15 136.7 18.6 269 591-892 3-299 (363)
407 PRK03244 argD acetylornithine 99.3 4.2E-10 9.1E-15 131.3 26.4 211 635-888 88-321 (398)
408 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.3 4.6E-10 1E-14 130.1 26.5 284 214-528 34-371 (375)
409 PRK09064 5-aminolevulinate syn 99.3 8.5E-11 1.8E-15 137.5 20.6 224 631-892 90-323 (407)
410 PRK05964 adenosylmethionine--8 99.3 3E-10 6.4E-15 133.8 25.2 264 591-889 53-346 (423)
411 TIGR02379 ECA_wecE TDP-4-keto- 99.3 7.5E-10 1.6E-14 128.3 28.0 282 213-528 33-372 (376)
412 PRK04870 histidinol-phosphate 99.3 1.8E-10 3.9E-15 132.3 22.7 250 590-888 27-286 (356)
413 PRK06207 aspartate aminotransf 99.3 1.9E-09 4.2E-14 126.2 31.7 273 208-528 79-397 (405)
414 PLN02187 rooty/superroot1 99.3 1.8E-10 4E-15 136.9 22.9 204 588-812 65-291 (462)
415 TIGR01366 serC_3 phosphoserine 99.3 9.7E-11 2.1E-15 135.0 19.8 226 630-889 39-280 (361)
416 PRK13393 5-aminolevulinate syn 99.3 1.1E-10 2.5E-15 136.5 20.7 223 632-892 90-322 (406)
417 PRK08068 transaminase; Reviewe 99.3 2.1E-09 4.6E-14 125.1 31.2 268 215-528 74-384 (389)
418 PRK08175 aminotransferase; Val 99.3 4.2E-10 9.2E-15 131.2 25.4 229 627-888 66-309 (395)
419 PLN02483 serine palmitoyltrans 99.3 1.4E-10 3E-15 138.7 21.5 228 631-893 145-393 (489)
420 PRK10534 L-threonine aldolase; 99.3 6.3E-11 1.4E-15 134.7 17.6 168 635-819 37-217 (333)
421 COG2008 GLY1 Threonine aldolas 99.3 1.4E-10 3.1E-15 128.6 19.6 295 178-528 11-338 (342)
422 PRK05664 threonine-phosphate d 99.3 1.3E-09 2.8E-14 124.1 28.2 261 215-529 53-324 (330)
423 PRK08363 alanine aminotransfer 99.3 4.2E-10 9.1E-15 131.4 24.7 232 627-889 69-315 (398)
424 PLN02822 serine palmitoyltrans 99.3 3.9E-10 8.5E-15 134.7 24.8 222 629-893 151-393 (481)
425 PRK03715 argD acetylornithine 99.3 2E-10 4.4E-15 133.9 21.8 217 633-888 79-316 (395)
426 PRK07337 aminotransferase; Val 99.3 2.2E-09 4.8E-14 124.8 30.5 269 215-528 71-384 (388)
427 KOG0628 Aromatic-L-amino-acid/ 99.3 2.6E-10 5.6E-15 128.5 21.4 252 629-893 110-399 (511)
428 PRK02731 histidinol-phosphate 99.3 2.2E-10 4.7E-15 132.1 21.8 217 635-889 70-295 (367)
429 PRK13578 ornithine decarboxyla 99.3 5.1E-11 1.1E-15 145.1 17.2 153 633-796 175-358 (720)
430 PRK07366 succinyldiaminopimela 99.3 3.4E-10 7.4E-15 131.6 23.5 210 590-819 31-261 (388)
431 COG0160 GabT 4-aminobutyrate a 99.3 1E-09 2.2E-14 127.3 26.7 251 590-888 66-359 (447)
432 PRK05942 aspartate aminotransf 99.3 1.3E-09 2.9E-14 127.0 28.0 265 216-527 78-386 (394)
433 PRK13237 tyrosine phenol-lyase 99.3 2.9E-10 6.3E-15 132.0 22.0 238 634-909 80-352 (460)
434 PRK12389 glutamate-1-semialdeh 99.3 2.4E-10 5.1E-15 134.7 21.7 242 592-888 65-340 (428)
435 PRK04013 argD acetylornithine/ 99.3 6.2E-10 1.3E-14 128.2 24.5 225 592-875 36-285 (364)
436 PRK08363 alanine aminotransfer 99.3 6.5E-09 1.4E-13 121.4 33.3 274 214-528 73-389 (398)
437 TIGR01265 tyr_nico_aTase tyros 99.3 1.2E-09 2.5E-14 127.9 26.8 167 627-812 72-256 (403)
438 PLN02624 ornithine-delta-amino 99.3 3.9E-10 8.5E-15 134.5 23.2 217 634-888 119-363 (474)
439 PRK05387 histidinol-phosphate 99.3 3.3E-10 7.1E-15 129.8 21.7 218 636-892 64-287 (353)
440 TIGR01265 tyr_nico_aTase tyros 99.3 7.2E-09 1.6E-13 121.3 33.2 270 213-528 75-396 (403)
441 PRK06290 aspartate aminotransf 99.3 2.8E-09 6.2E-14 125.0 29.9 269 215-529 85-401 (410)
442 PRK06107 aspartate aminotransf 99.3 3.1E-10 6.7E-15 132.7 21.7 228 627-888 69-313 (402)
443 TIGR01264 tyr_amTase_E tyrosin 99.3 4.3E-09 9.4E-14 123.0 31.2 274 215-528 77-394 (401)
444 TIGR03576 pyridox_MJ0158 pyrid 99.3 2.9E-10 6.3E-15 130.2 20.9 165 629-819 51-224 (346)
445 TIGR01140 L_thr_O3P_dcar L-thr 99.3 4.4E-10 9.6E-15 127.9 22.2 207 635-889 50-264 (330)
446 PTZ00433 tyrosine aminotransfe 99.3 7.8E-10 1.7E-14 129.8 24.8 171 627-811 74-263 (412)
447 PRK04635 histidinol-phosphate 99.3 2.7E-10 5.9E-15 130.9 20.5 216 636-889 64-286 (354)
448 TIGR03372 putres_am_tran putre 99.2 4.2E-10 9.1E-15 132.7 22.2 249 591-888 86-365 (442)
449 PRK15407 lipopolysaccharide bi 99.2 1.4E-09 2.9E-14 128.5 26.4 296 213-528 65-431 (438)
450 PRK06959 putative threonine-ph 99.2 2.5E-09 5.4E-14 122.3 27.9 262 215-529 57-329 (339)
451 TIGR00707 argD acetylornithine 99.2 2.1E-09 4.6E-14 124.3 27.6 274 212-528 70-376 (379)
452 PRK03158 histidinol-phosphate 99.2 5.2E-10 1.1E-14 128.6 22.3 169 635-819 67-244 (359)
453 TIGR01364 serC_1 phosphoserine 99.2 1.1E-10 2.4E-15 133.9 16.5 222 630-889 35-270 (349)
454 PRK03317 histidinol-phosphate 99.2 2E-09 4.3E-14 124.4 27.0 264 215-529 69-360 (368)
455 PRK01278 argD acetylornithine 99.2 4.5E-10 9.8E-15 130.7 21.9 251 592-888 43-313 (389)
456 PRK09265 aminotransferase AlaT 99.2 6.4E-09 1.4E-13 121.7 31.4 326 151-528 19-396 (404)
457 PRK06358 threonine-phosphate d 99.2 4.1E-09 8.9E-14 121.2 29.3 296 172-528 25-350 (354)
458 PRK07309 aromatic amino acid a 99.2 4.9E-09 1.1E-13 122.2 30.1 268 215-529 71-384 (391)
459 TIGR01264 tyr_amTase_E tyrosin 99.2 9.3E-10 2E-14 128.6 23.9 205 589-813 31-256 (401)
460 TIGR03811 tyr_de_CO2_Ent tyros 99.2 6.4E-09 1.4E-13 126.0 31.4 394 102-530 8-561 (608)
461 PRK06943 adenosylmethionine--8 99.2 7E-10 1.5E-14 131.5 22.8 263 592-889 66-368 (453)
462 TIGR01885 Orn_aminotrans ornit 99.2 2.1E-09 4.6E-14 125.7 26.5 223 633-889 80-326 (401)
463 PRK01533 histidinol-phosphate 99.2 4E-10 8.6E-15 130.2 20.2 202 590-819 30-244 (366)
464 PRK12403 putative aminotransfe 99.2 1E-09 2.2E-14 130.4 24.1 261 592-888 66-366 (460)
465 cd00611 PSAT_like Phosphoserin 99.2 7.1E-11 1.5E-15 135.8 13.6 228 629-889 41-278 (355)
466 PRK11522 putrescine--2-oxoglut 99.2 4.2E-10 9.1E-15 133.4 20.4 249 591-888 93-372 (459)
467 cd00610 OAT_like Acetyl ornith 99.2 7.3E-10 1.6E-14 129.6 22.3 223 632-888 79-331 (413)
468 PRK06348 aspartate aminotransf 99.2 1E-08 2.2E-13 119.2 31.7 267 216-528 71-380 (384)
469 PLN03026 histidinol-phosphate 99.2 4E-10 8.6E-15 130.9 19.8 169 635-819 89-262 (380)
470 PRK07678 aminotransferase; Val 99.2 8.1E-10 1.8E-14 131.0 22.8 261 592-888 59-358 (451)
471 PRK07683 aminotransferase A; V 99.2 9E-09 2E-13 119.8 31.0 267 215-528 69-378 (387)
472 PRK07482 hypothetical protein; 99.2 8.2E-10 1.8E-14 131.3 22.6 263 592-888 62-366 (461)
473 PRK13355 bifunctional HTH-doma 99.2 2.9E-10 6.2E-15 137.3 19.1 216 573-812 134-368 (517)
474 PRK08636 aspartate aminotransf 99.2 2E-09 4.4E-14 125.9 25.4 181 627-818 70-269 (403)
475 PLN02231 alanine transaminase 99.2 1E-08 2.2E-13 123.9 31.8 365 97-529 70-523 (534)
476 PRK05166 histidinol-phosphate 99.2 1.7E-09 3.7E-14 125.1 24.3 168 636-818 75-253 (371)
477 PRK08175 aminotransferase; Val 99.2 6E-09 1.3E-13 121.6 29.0 268 216-528 72-384 (395)
478 PRK07046 aminotransferase; Val 99.2 4.9E-10 1.1E-14 132.7 19.7 252 592-888 87-363 (453)
479 PRK07908 hypothetical protein; 99.2 1.9E-09 4.2E-14 123.5 24.1 211 636-889 62-276 (349)
480 PRK15481 transcriptional regul 99.2 1.1E-09 2.4E-14 129.2 22.5 209 651-895 143-363 (431)
481 PRK04781 histidinol-phosphate 99.2 4.2E-09 9.2E-14 121.6 26.8 267 214-528 62-358 (364)
482 PRK08153 histidinol-phosphate 99.2 1.4E-09 3.1E-14 125.7 22.9 217 635-888 70-292 (369)
483 PRK12381 bifunctional succinyl 99.2 1.2E-09 2.5E-14 128.1 22.4 246 592-888 51-321 (406)
484 PRK03317 histidinol-phosphate 99.2 1.1E-09 2.3E-14 126.6 21.7 178 628-819 65-250 (368)
485 PLN02482 glutamate-1-semialdeh 99.2 7.9E-10 1.7E-14 131.4 21.1 243 592-888 111-386 (474)
486 PTZ00433 tyrosine aminotransfe 99.2 8.9E-09 1.9E-13 120.9 29.7 269 216-528 80-403 (412)
487 PLN00143 tyrosine/nicotianamin 99.2 1.9E-09 4E-14 126.5 23.7 219 572-812 17-257 (409)
488 PTZ00125 ornithine aminotransf 99.2 1.3E-09 2.9E-14 127.1 22.3 220 633-888 74-317 (400)
489 PRK09148 aminotransferase; Val 99.2 1.8E-08 3.8E-13 118.1 31.6 266 216-528 73-385 (405)
490 PRK09264 diaminobutyrate--2-ox 99.2 1.1E-08 2.4E-13 120.5 30.1 251 591-888 50-337 (425)
491 PRK01278 argD acetylornithine 99.2 5.7E-09 1.2E-13 121.5 27.3 276 212-529 74-384 (389)
492 PRK03715 argD acetylornithine 99.2 3.1E-09 6.7E-14 124.0 24.9 268 216-529 83-389 (395)
493 PRK01688 histidinol-phosphate 99.2 5.1E-10 1.1E-14 128.5 17.9 224 635-895 60-293 (351)
494 PLN02368 alanine transaminase 99.2 1.8E-09 4E-14 126.3 22.8 182 627-818 106-316 (407)
495 PF00464 SHMT: Serine hydroxym 99.2 2E-10 4.3E-15 132.1 14.4 282 216-526 71-398 (399)
496 COG0001 HemL Glutamate-1-semia 99.2 3.2E-09 6.8E-14 121.3 23.9 218 633-888 94-341 (432)
497 PRK08056 threonine-phosphate d 99.2 1.8E-09 3.9E-14 124.2 22.4 160 635-812 58-227 (356)
498 PRK07366 succinyldiaminopimela 99.2 1.1E-08 2.4E-13 119.0 29.2 265 216-528 73-385 (388)
499 PRK13355 bifunctional HTH-doma 99.2 1.3E-08 2.7E-13 123.2 30.2 322 153-528 134-509 (517)
500 KOG3846 L-kynurenine hydrolase 99.2 4.8E-10 1E-14 120.0 15.7 301 218-529 118-457 (465)
No 1
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-228 Score=1889.45 Aligned_cols=914 Identities=68% Similarity=1.124 Sum_probs=872.9
Q ss_pred cccccccccCCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 001769 83 QTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLA 161 (1016)
Q Consensus 83 ~~~~~~~~~~~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la 161 (1016)
.++++....+++.|+|.+|||||++.|+++||+++|++|+|+|++++||++| +++++.+| ++++|.|+++++..+|
T Consensus 37 ~~~~~~~~~~~~~d~F~~RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~Ir~~~~l~~~---~~~~E~eml~~l~~ia 113 (1001)
T KOG2040|consen 37 ATRSQSERIFPPLDTFPRRHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSIRLKRPLKMD---KPLCESEMLQHLEDIA 113 (1001)
T ss_pred hhcchhhhccCcccccccccCCCCchHHHHHHHhcChhhHHHHHHhhcchhhcccchhcCC---CCcCHHHHHHHHHHHH
Confidence 4555666668889999999999999999999999999999999999999999 88999997 8999999999999999
Q ss_pred cCCCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHH
Q 001769 162 SMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAA 241 (1016)
Q Consensus 162 ~~n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~ 241 (1016)
+||+.|++|+|+|||++.+|++|+||+++||+|||+|||||||||||+||.+++||+||++|||++.+|+||+|+|||++
T Consensus 114 ~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaa 193 (1001)
T KOG2040|consen 114 SKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAA 193 (1001)
T ss_pred hhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhccCCCEeEEEEEcCCCCeeeccHHHHHHH
Q 001769 242 EAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKN 321 (1016)
Q Consensus 242 eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~l~~~t~~V~v~~pn~~G~i~dl~eI~~l 321 (1016)
|||.|+.+.. ++++++|+..+||+++++++|+++++|++++..|+.+.....+++.+|+||||++.|.|.|+.++++.
T Consensus 194 EAm~l~~~~~--krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~~~~s~~~v~gvlvQYP~t~G~i~d~~el~~~ 271 (1001)
T KOG2040|consen 194 EAMALCNRIN--KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKEADYSSKDVSGVLVQYPDTEGSVLDFDELVEL 271 (1001)
T ss_pred HHHHHHHhhc--ccceEEecCCCCcchhhhhhccccccceeEEecCHHHhhccccceeEEEEEcCCCCCcccCHHHHHHH
Confidence 9999998875 67889999999999999999999999999998887655444567999999999999999999999999
Q ss_pred HHhCCcEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCccee
Q 001769 322 AHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 401 (1016)
Q Consensus 322 ah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~ 401 (1016)
+|+.|.++++++|+++|.+|++||+|||||++||+|+||+||||||||+|||+|++++.|.||||+||+|+|+.|+++|+
T Consensus 272 a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~R 351 (1001)
T KOG2040|consen 272 AHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYR 351 (1001)
T ss_pred hhccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEe
Q 001769 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 481 (1016)
Q Consensus 402 l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~ 481 (1016)
|+||||||||||+||||||||+|+|+|+|+++|+.|||++||++|++|++..+.+|+.+|++.| .++.+.++||++.|+
T Consensus 352 LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~fFDTLkI~ 430 (1001)
T KOG2040|consen 352 LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKPFFDTLKIR 430 (1001)
T ss_pred HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhccccccceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999998 899988999999999
Q ss_pred cCC-HHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh-----hhcCCCCccCC
Q 001769 482 CAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV-----ETAIPSGLTRE 555 (1016)
Q Consensus 482 ~~~-~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~~~~~~~~~~~l~~~~-----~~~ip~~~~~~ 555 (1016)
+.. ++++.++..+++|+++.++++.|.+|++|+++++|+++|+++|..+ +..++.... ...+|+.++|+
T Consensus 431 ~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~~~-----ss~~~~~E~~~~e~~~~~~s~f~Rt 505 (1001)
T KOG2040|consen 431 CGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFNEE-----SSVELVAESMGEECNGIPPSVFKRT 505 (1001)
T ss_pred ecCcHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHccC-----ChHHHHHHhhhhhccCCCCcccccC
Confidence 987 8999999999999999999999999999999999999999999865 334443322 12468899999
Q ss_pred CCCCCCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHH
Q 001769 556 SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (1016)
Q Consensus 556 ~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~ 635 (1016)
++||++|+|+.++||++++|||++|.+||+++.++||||||||||+|...++.|+.||+|+++|||+|.||.||+.+++.
T Consensus 506 s~~L~hpVFn~yhSEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~ 585 (1001)
T KOG2040|consen 506 SPYLTHPVFNSYHSETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFT 585 (1001)
T ss_pred CccccchhhhhcccHHHHHHHHHHhhccchhhhhhcccccceeeeccccceeccccchhhccCCCCCchHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCC
Q 001769 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1016)
Q Consensus 636 el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~i 715 (1016)
+++++||++||+|..++||||||+||+++|++||+|++++|+++|+.||||.|+||+||++|+|+|++|+.|.++.+|.+
T Consensus 586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i 665 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI 665 (1001)
T ss_pred HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccc
Q 001769 716 NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTF 795 (1016)
Q Consensus 716 D~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~ 795 (1016)
|+.+|+++.++|+++++++||+||+++|+|+++|+++|++.|+||++||.||||++++.|+++||++|+||+++++||+|
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTF 745 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTF 745 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeeccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHH
Q 001769 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1016)
Q Consensus 796 ~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~ 875 (1016)
++||||||||+|+|+++++|++++|++.+...+. -+..+.+|.++++|||++++++++|+||++||..||+..++.+
T Consensus 746 cIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~---~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~A 822 (1001)
T KOG2040|consen 746 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGR---PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIA 822 (1001)
T ss_pred eecCCCCCCCCCccchhhhccccCCCCCccCCCC---CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHH
Confidence 9999999999999999999999999987653221 1223457889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCccccCCCCceeeEEEEEecCchh-----------------------------------------
Q 001769 876 ILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKE----------------------------------------- 914 (1016)
Q Consensus 876 ~~nA~yla~~L~~~~~v~y~g~~~~~~he~i~~~~~~~~----------------------------------------- 914 (1016)
++||||+++||+.+|+++|.|.++.|.||||+|++++|+
T Consensus 823 iLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k 902 (1001)
T KOG2040|consen 823 ILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDK 902 (1001)
T ss_pred hhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccH
Confidence 999999999999999999999999999999999998765
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCcccCCCcccccccC
Q 001769 915 -ELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYG 993 (1016)
Q Consensus 915 -~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k~~~~~~r~~~~~~ 993 (1016)
|+|||||+|++||+||.+||+|..|++.|+||+|||+..++++++|+||||||+||||+||++++||||+|+||||+||
T Consensus 903 ~ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~~~~v~s~~WdrpYsRE~AafP~p~lk~~KfWPtv~RvDd~YG 982 (1001)
T KOG2040|consen 903 AELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHPLEDVTSDNWDRPYSREYAAFPAPFLKENKFWPTVGRVDDAYG 982 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCCHHHhhhhccCCccchhhhcCCchhhhhcccCCcccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCchhhhHHH
Q 001769 994 DRNLICTLLPAAQVAEE 1010 (1016)
Q Consensus 994 ~~~~~~~~~~~~~~~~~ 1010 (1016)
||||||||||+++|+.+
T Consensus 983 D~nLvCTcppv~~~~~~ 999 (1001)
T KOG2040|consen 983 DRNLVCTCPPVEEYQSA 999 (1001)
T ss_pred ccceeeeCCCchhhhcc
Confidence 99999999999988754
No 2
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=5.2e-209 Score=1873.00 Aligned_cols=900 Identities=54% Similarity=0.955 Sum_probs=839.1
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccc
Q 001769 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSF 170 (1016)
Q Consensus 92 ~~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~~ 170 (1016)
+.+.|.|+.||||||++|+++||++||++|+||||+++||++| ++++|+|| +++||.|+++||++|++||+.+.+|
T Consensus 7 ~~~~~~f~~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir~~~~l~lp---~~~sE~e~~~~~~~~a~kN~~~~~f 83 (954)
T PRK12566 7 LQEPDAFLRRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIRLNRPLDLP---AALDEQAALARLRGYAEQNQVWTSL 83 (954)
T ss_pred cccccchhhccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcccc
Confidence 5567899999999999999999999999999999988899999 88889998 7999999999999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhcc
Q 001769 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~ 250 (1016)
+|+|||+|++|++|+|+|++||+|||+|||||||+|||+||+|+|||+||++|||||++|+||||++||++|||+|+.+.
T Consensus 84 iG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~ 163 (954)
T PRK12566 84 IGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRV 163 (954)
T ss_pred ccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEE
Q 001769 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKV 329 (1016)
Q Consensus 251 ~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~Galv 329 (1016)
+++++++|+|++.+||+++++++||++..|++++..+ ++. +++++++|+||+||++|.|+|+++|++++|++|+++
T Consensus 164 ~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~~---~~~~~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 164 AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVDA---VDNLAAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEcc---hhhcCCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCEE
Confidence 6445789999999999999999999999999999744 444 567899999999999999999999999999999999
Q ss_pred EEEeccccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccc
Q 001769 330 VMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQ 409 (1016)
Q Consensus 330 iV~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq 409 (1016)
+|++|+++|+++++||+|||||+||++|+||+||+|||||+|||+++++++|+|||||||+|+|.+|+++|+|+||||||
T Consensus 241 ~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQ 320 (954)
T PRK12566 241 CVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQ 320 (954)
T ss_pred EEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC-CHHHH
Q 001769 410 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAI 488 (1016)
Q Consensus 410 hiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~-~~~~v 488 (1016)
|||||||||||||+|+|+|++|++|++|||++||++|+++++.+|+||+++|++.| +++..+++|++|++++. .+.++
T Consensus 321 HIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~fF~~~~v~~~~~~~~~ 399 (954)
T PRK12566 321 HIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRHFFDTLTLEVGGAQAAI 399 (954)
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCccceEEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 99987899999999986 37889
Q ss_pred HHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhh-hhhcCCCCccCCCCCCCCcccccC
Q 001769 489 ASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEE-VETAIPSGLTRESPYLTHPVFNKY 567 (1016)
Q Consensus 489 ~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~~~~~~~~~~~l~~~-~~~~ip~~~~~~~~~l~lp~~~~~ 567 (1016)
.++..++||+++.++++.+.+|++|++|.+|++.++++|...+.. .+.+.+... +...||+.++|++++++||+|+++
T Consensus 400 ~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~~ 478 (954)
T PRK12566 400 IESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFLGADHG-LDVAALDQGALAEGIPAVLQRRTAYLQHPVFNAH 478 (954)
T ss_pred HHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhcCCCcc-cchhhhccccccccCchhhhcCCccccCcccccC
Confidence 999999999999998899999999999999999999999632110 011112110 112499999999999999999999
Q ss_pred CCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCC
Q 001769 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1016)
Q Consensus 568 ~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~ 647 (1016)
+||.||+|||++|++||++++++|||||+||||+|++.|++|++|++|++.|||||.|++||++|+++|+|+++|+||||
T Consensus 479 ~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGm 558 (954)
T PRK12566 479 HSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGF 558 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcC
Q 001769 648 DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1016)
Q Consensus 648 ~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~ 727 (1016)
+.+++++++|++||++++|++|.||.++|+.+|++||+|.++|++||.++.+.|++|+.+++|++|.+|+++|+++++++
T Consensus 559 d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~ 638 (954)
T PRK12566 559 DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAA 638 (954)
T ss_pred CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhcc
Confidence 99999999999999999999999999999878999999999999999999999999999999999999999999999877
Q ss_pred CCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEE
Q 001769 728 RDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMG 807 (1016)
Q Consensus 728 ~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G 807 (1016)
++++++|++++||++|+++.|+++|+++||++|++++|||||++++.++..|+++|+|++++++||||++|||+|||++|
T Consensus 639 ~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG 718 (954)
T PRK12566 639 GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMG 718 (954)
T ss_pred CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccc
Confidence 78999999999999999986799999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccccCCCCc-cccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 001769 808 PIGVKKHLAPFLPSHP-VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1016)
Q Consensus 808 ~i~~~~~l~~~lpg~~-~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L 886 (1016)
++++++++.+++|+.. +...|. +.+. +.++.++||+++++++||+||.+||.+ +++.++.+++||+|++++|
T Consensus 719 ~iav~~~L~pfLp~~P~~d~~G~---~~r~---ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL 791 (954)
T PRK12566 719 PIGVRAHLAPFVANHPVVPVEGP---DPNN---GAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQL 791 (954)
T ss_pred hhhhhhhhhhhccCCCCcCCCCC---CCCC---CceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHh
Confidence 9999998888887643 111121 1122 444445778999999999999999999 9999999999999999999
Q ss_pred hccCCccccCCCCceeeEEEEEecCch------------------------------------------hHHHHHHHHHH
Q 001769 887 EKHYPILFRGVNGTVAHEFIVDLRGLK------------------------------------------EELDRYCDALI 924 (1016)
Q Consensus 887 ~~~~~v~y~g~~~~~~he~i~~~~~~~------------------------------------------~~ld~f~~~l~ 924 (1016)
++++++.|.+.+++|+|||++++.+.+ +++|+|+++|+
T Consensus 792 ~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~ 871 (954)
T PRK12566 792 GGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAML 871 (954)
T ss_pred HhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHH
Confidence 999999998777789999999876321 09999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCcccCCCcccccccCCCccccccCch
Q 001769 925 SIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPA 1004 (1016)
Q Consensus 925 ~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k~~~~~~r~~~~~~~~~~~~~~~~~ 1004 (1016)
.|++||++|++|+||+++|+|||||||+.++++ +|+||||||+||||++|++++||||||+||||+||||||+|+|||+
T Consensus 872 ~I~~e~~~v~~g~~~~~~n~l~~apht~~~~~~-~w~~~y~r~~a~~p~~~~~~~k~wp~v~r~d~~~gdrnl~c~c~~~ 950 (954)
T PRK12566 872 SIRAEIGKVQEGNWPAEDNPLKRAPHTLADVTG-VWQRPYSIEQAVTPSAHARAHKYWPAVNRVDNVYGDRNLFCACVPV 950 (954)
T ss_pred HHHHHHHHHHcCCCCcccCcccCCCCchHHhhc-cCCCCcChhhcccCCCcccCCCcCCCcCCcCccccccccccCCCCh
Confidence 999999999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 001769 1005 AQV 1007 (1016)
Q Consensus 1005 ~~~ 1007 (1016)
|+|
T Consensus 951 ~~~ 953 (954)
T PRK12566 951 DDY 953 (954)
T ss_pred hhc
Confidence 987
No 3
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=2.9e-203 Score=1836.97 Aligned_cols=893 Identities=59% Similarity=0.992 Sum_probs=838.3
Q ss_pred cCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCCCCCCCC
Q 001769 101 RHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTH 179 (1016)
Q Consensus 101 ~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~~lG~g~y~~~ 179 (1016)
|||||+++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++||++|+++|+.+.+|+|+|+|+|+
T Consensus 1 rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~ 77 (939)
T TIGR00461 1 RHLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNILKRRPLQLE---APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTI 77 (939)
T ss_pred CCCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCc
Confidence 8999999999999999999999999999899999 88889998 7899999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEE
Q 001769 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFI 259 (1016)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vl 259 (1016)
+|++|+|++++||+|||+|||||||+|||+||+++|||+|+++||||+.+|+||+|++||++||++||.+..++++++||
T Consensus 78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vl 157 (939)
T TIGR00461 78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFF 157 (939)
T ss_pred CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876544568999
Q ss_pred EcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccc
Q 001769 260 IASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL 338 (1016)
Q Consensus 260 vs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~al 338 (1016)
|++.+||+++.+++|+++..|++++.+|+++|+. + ++++|++|+||++|.++|+++|++++|++|++++|++|++++
T Consensus 158 v~~~~hP~~~~v~~t~a~~~g~~v~~~~~~~l~~~~--~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 158 VAKDLHPQTKSVLHTRAKPFGIEVIVVDCSDIKKAV--DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred ECCCCCcchHHHHHHHHHhcCcEEEEEcHHHHhhcC--CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh
Confidence 9999999999999999999999999999988876 5 689999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCC
Q 001769 339 TILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1016)
Q Consensus 339 g~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTs 418 (1016)
+++++||+|||||+||++|+||+||||||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|||||||||||||||
T Consensus 236 ~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtS 315 (939)
T TIGR00461 236 TLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATS 315 (939)
T ss_pred CCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC--CHHHHHHHHHHcC
Q 001769 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIE 496 (1016)
Q Consensus 419 nicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~--~~~~v~~~L~~~G 496 (1016)
||||+|+|++++|++|+.|||++||++|+++++.+++||+++|++.| +++..+++|++|+|+++ .+.++.++|.++|
T Consensus 316 NICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~g 394 (939)
T TIGR00461 316 NICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKTWFDTLTVKVGNGISSELLKAAEEFN 394 (939)
T ss_pred chhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCccceEEEEeCCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999988 99988899999999987 3889999999999
Q ss_pred ceeecccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHHHHHHH
Q 001769 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRY 576 (1016)
Q Consensus 497 I~~~~~~~~~lris~te~~t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~ 576 (1016)
|+++...++.+++|+||++|++||+.|+++|........+.+.+.+.+...||+.++|+++++.+|+|++++||.||+||
T Consensus 395 i~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~ 474 (939)
T TIGR00461 395 INLRAVDTTTVGIALDETTTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRY 474 (939)
T ss_pred CeeeecCCCEEEEEeecCCCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHH
Confidence 99988767899999999999999999999996321100011112111122499999999999999999999999999999
Q ss_pred HHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCC
Q 001769 577 IHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNA 656 (1016)
Q Consensus 577 l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~s 656 (1016)
|++|++||++++++||++||||||+|+..++.+++|++|++||||||++++||++|+++|+|+|||++|||+.+++++++
T Consensus 475 ~~~L~~kn~~~~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~a 554 (939)
T TIGR00461 475 LHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNS 554 (939)
T ss_pred HHHHHhcCCCccccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCch
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEE
Q 001769 657 GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1016)
Q Consensus 657 Ga~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i 736 (1016)
||+||+++++++|.|++.+|+.+|++|++|.++||+||+++.+.|++|++|++|++|.+|+++|++++++++++|++|++
T Consensus 555 GA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~i 634 (939)
T TIGR00461 555 GAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMV 634 (939)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEE
Confidence 99999999999999999998878899999999999999999999999999999999999999999999866679999999
Q ss_pred EcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEccccc
Q 001769 737 TYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (1016)
Q Consensus 737 ~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~ 816 (1016)
++||++|++++||++|+++||++|++++|||||++++.++.+|+++|+|++++|.||+|++|||+||||+|++++++++.
T Consensus 635 T~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 635 TYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred EeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 99999999985699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhccCCccccC
Q 001769 817 PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRG 896 (1016)
Q Consensus 817 ~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~~~v~y~g 896 (1016)
+++||+.++.+-.. ..++..++.+++.+||++++++++|+||++||.+||+++++.+++||+|++++|+++++++|+|
T Consensus 715 ~~lPg~~v~~t~d~--~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~ 792 (939)
T TIGR00461 715 PFLPKHDVVSMITG--IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVG 792 (939)
T ss_pred hhcCCCcccccccC--CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccC
Confidence 99999987543000 0134556677766899999999999999999999999999999999999999999999999998
Q ss_pred CCCceeeEEEEEecCchh------------------------------------------HHHHHHHHHHHHHHHHHHHh
Q 001769 897 VNGTVAHEFIVDLRGLKE------------------------------------------ELDRYCDALISIREEIAQIE 934 (1016)
Q Consensus 897 ~~~~~~he~i~~~~~~~~------------------------------------------~ld~f~~~l~~i~~e~~~~~ 934 (1016)
..++|+|||+++++++++ ++|+||++|+.|++|+++|+
T Consensus 793 ~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 793 TLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred CCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 878999999999874321 89999999999999999999
Q ss_pred cCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCcccCCCcccccccCCCcccccc
Q 001769 935 NGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTL 1001 (1016)
Q Consensus 935 ~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k~~~~~~r~~~~~~~~~~~~~~ 1001 (1016)
+|+||+++|+|||||||..++++++|+||||||+||||++|++++||||||+||||+||||||+|+|
T Consensus 873 ~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~wp~v~r~d~~~gd~nl~c~c 939 (939)
T TIGR00461 873 AGQPKGQDNPLKNAPHSLQSLITSEWWHPYSREEAAYPAPFLRYNKFWPTVARLDDTYGDRNLICSC 939 (939)
T ss_pred cCCCCCCcchHhhCCCCHHHhhcCCCCCCcChhhccCCCcccccCCcCCCcCCccccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999
No 4
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=7.3e-198 Score=1812.10 Aligned_cols=915 Identities=86% Similarity=1.357 Sum_probs=846.0
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccccc
Q 001769 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (1016)
Q Consensus 92 ~~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~~l 171 (1016)
+.+.|.|+.||||||++|+++||++||++|+||||+++||++|++++++||.+.+++||.|+++||++|+.+|+.+.+|+
T Consensus 29 ~~~~~~f~~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fi 108 (993)
T PLN02414 29 LKPSDTFPRRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYI 108 (993)
T ss_pred cccccchhhccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcccccc
Confidence 34467899999999999999999999999999999888999995558888633368999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
|+|+|+|++|++|.+++++|++|||+|||||||+|||+||++++||++||+|+||+++|+||+|++|+++|+++|+.++.
T Consensus 109 G~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~ 188 (993)
T PLN02414 109 GMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL 188 (993)
T ss_pred CCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhccCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEE
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVM 331 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV 331 (1016)
++++++|||++.+||+++.+|++++++.|++++.++.++....++++.++++|+||++|.+.|+++|+++||++|++++|
T Consensus 189 ~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 189 KGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM 268 (993)
T ss_pred cCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE
Confidence 44568999999999999999999999999999999976532234578889999999999999999999999999999999
Q ss_pred EeccccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccc
Q 001769 332 ATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI 411 (1016)
Q Consensus 332 ~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhi 411 (1016)
++|+++++.+++|+++||||+++++|+|++|+||||||+|||++++++.|++|||++||++|.+|+++|+++||||||||
T Consensus 269 aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhi 348 (993)
T PLN02414 269 ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHI 348 (993)
T ss_pred EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHH
Q 001769 412 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASA 491 (1016)
Q Consensus 412 RRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~ 491 (1016)
|||+|||||||+|++++.++++|+.+||++|+++++++++.+++||+++|++.| +++..+++|++|+|+.+.+.++.++
T Consensus 349 RrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~~f~~vt~~~~~~~~v~~~ 427 (993)
T PLN02414 349 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLPFFDTVKVKCSDADAIADA 427 (993)
T ss_pred hhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCcCeEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988 9988778899999988768889999
Q ss_pred HHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHH
Q 001769 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEH 571 (1016)
Q Consensus 492 L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~ 571 (1016)
|.++||+++...++.+|+|+|++||++|||+|+++|...+......+.+.+.+...||+.++|++++|++|+|++++||+
T Consensus 428 L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~ 507 (993)
T PLN02414 428 AAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEH 507 (993)
T ss_pred HHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHH
Confidence 99999999987778899999999999999999999974311110011121111235999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCcee
Q 001769 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS 651 (1016)
Q Consensus 572 e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~ 651 (1016)
||+|||++|++||++++++||||||||||+|+..++.+++||+|..+|||+|.++.||+++++++++++|++++|++.++
T Consensus 508 ~~~r~~~~l~~~~~~~~~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~v~ 587 (993)
T PLN02414 508 ELLRYLHRLQNKDLSLVHSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDSFS 587 (993)
T ss_pred HHHHHHHHHhhcccccccCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCE
Q 001769 652 LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1016)
Q Consensus 652 l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t 731 (1016)
|++++|++||+++++++++|++.+|+.+|++||+|.++|++|++.+.+.|++|++|++|++|.+|+++|+++|+++.++|
T Consensus 588 f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~t 667 (993)
T PLN02414 588 LQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNL 667 (993)
T ss_pred EcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCe
Confidence 99999999999999999999988787678899999999999999999999999999999999999999999998655689
Q ss_pred EEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEE
Q 001769 732 STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1016)
Q Consensus 732 ~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~ 811 (1016)
++|++++||+.|.++.||++|+++||++|++++|||||+++++++.+|+++|+|++++|.||+|+.|||+||||+|++++
T Consensus 668 a~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~ 747 (993)
T PLN02414 668 AALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 747 (993)
T ss_pred EEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEE
Confidence 99999999988777768999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhccCC
Q 001769 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP 891 (1016)
Q Consensus 812 ~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~~~ 891 (1016)
++++.+++|++.++.++....|+....+|.+.+++||+++++++||+||.+||.+||+++++++++||+|++++|+++++
T Consensus 748 ~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~ 827 (993)
T PLN02414 748 KKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYP 827 (993)
T ss_pred chhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999876543222222223456666679999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCceeeEEEEEecCch-------h-----------------------------------HHHHHHHHHHHHHHH
Q 001769 892 ILFRGVNGTVAHEFIVDLRGLK-------E-----------------------------------ELDRYCDALISIREE 929 (1016)
Q Consensus 892 v~y~g~~~~~~he~i~~~~~~~-------~-----------------------------------~ld~f~~~l~~i~~e 929 (1016)
+.|+|.+++|+|||+++++..+ + ++|+|+++|+.|++|
T Consensus 828 ~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 828 VLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred ccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 9999988899999999987321 0 899999999999999
Q ss_pred HHHHhcCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCcccCCCcccccccCCCccccccCchhhh
Q 001769 930 IAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAQV 1007 (1016)
Q Consensus 930 ~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k~~~~~~r~~~~~~~~~~~~~~~~~~~~ 1007 (1016)
+++|++|+||++||+|||||||+.++++++|+||||||+|+||++|++++||||||+||||+||||||+|+|||+.+-
T Consensus 908 ~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~~~~v~r~d~~~gd~~l~c~c~~~~~~ 985 (993)
T PLN02414 908 IADIENGKADRENNVLKGAPHPPSLLMADKWDKPYSREYAAFPAPWVRASKFWPTTGRVDNVYGDRNLVCTLPSAAEE 985 (993)
T ss_pred HHHHhcCCCCCCCchhhcCCCChHHhhcCCCCCCcChhhccCCCcccccCccCCCccccccccccccccccCCCccch
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998543
No 5
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.5e-193 Score=1781.20 Aligned_cols=901 Identities=61% Similarity=1.042 Sum_probs=843.2
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccccc
Q 001769 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (1016)
Q Consensus 93 ~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~~l 171 (1016)
.+.|+|+.||||||++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++||++|++||+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~~i 81 (954)
T PRK05367 5 ENSDAFARRHIGPSAADQQAMLAALGADSLDALIDQAVPASIRLAEPLDLP---AALSEAEALAELRAIASKNKVFRSYI 81 (954)
T ss_pred cccccccccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 456889999999999999999999999999999999999999 88899998 79999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
|+|||+|++|++|+|+|++||+|||+|||||||+|||+||+++|||+|+|+|+||+++|+||+|++|+++|+++|++++.
T Consensus 82 g~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 82 GQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh-hhccCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEE
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVV 330 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~-L~~l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~Galvi 330 (1016)
++++++|||++.+||+++.+|+++++..|+++++++.++ +. ++++.+|++|+||++|.+.|+++|+++||++|++++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~~--~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~ 239 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKALD--HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVA 239 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCCC--cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEE
Confidence 323589999999999999999999999999999998753 32 357899999999999999999999999999999999
Q ss_pred EEeccccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccccc
Q 001769 331 MATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQH 410 (1016)
Q Consensus 331 V~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqh 410 (1016)
|++++++++++++|+++||||+++++|+||+||||||||+|||+++++++|+||||++||++|.+|+++|+|++||||||
T Consensus 240 vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqh 319 (954)
T PRK05367 240 VAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQH 319 (954)
T ss_pred EEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HHHHH
Q 001769 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIA 489 (1016)
Q Consensus 411 iRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~v~ 489 (1016)
||||+|||||||+|++++++|++|+.|||++|+++|+++++.+++||+++|++.| +++..+.+|++++++.+. +.++.
T Consensus 320 iRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~~f~~~~~~~~~~~~~i~ 398 (954)
T PRK05367 320 IRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDSFFDTLTVEVGGDAAAVL 398 (954)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCCCCCeEEEeCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998877 998877889999998864 89999
Q ss_pred HHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh----hhcCCCCccCCCCCCCCcccc
Q 001769 490 SAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVFN 565 (1016)
Q Consensus 490 ~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~~~~~~~~~~~l~~~~----~~~ip~~~~~~~~~l~lp~~~ 565 (1016)
++|.++||+++...++.||+|+||++|++||++|+++|+.... +.+.+.... ...||+.++|+++++.+|+|+
T Consensus 399 ~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~ 475 (954)
T PRK05367 399 ARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFGGAAL---DVDALDADVADASASALPAALLRTSAYLTHPVFN 475 (954)
T ss_pred HHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHccccc---chhhhhhhhcccccccCCHHHhcCCcccCCcccC
Confidence 9999999999887778999999999999999999999974310 112111101 124999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHh
Q 001769 566 KYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1016)
Q Consensus 566 ~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~ 645 (1016)
.++||.||+|||++|++||.+++++||+|||||||+|+..++.+++|++|++||||||.|++||++++++++++|+|+||
T Consensus 476 ~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~elt 555 (954)
T PRK05367 476 RYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEIT 555 (954)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHH
Q 001769 646 GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAE 725 (1016)
Q Consensus 646 G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~ 725 (1016)
|++.+++++++|++||+++++++|.|+.++|+.+|++|++|+++|++|++++.+.|++|+++++|.+|.+|+++|+++++
T Consensus 556 G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~ 635 (954)
T PRK05367 556 GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAE 635 (954)
T ss_pred CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHh
Confidence 99999999999999999999999999888887678899999999999999999999999999999999999999999998
Q ss_pred cCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCe
Q 001769 726 ANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPG 805 (1016)
Q Consensus 726 ~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg 805 (1016)
++++++++|++++|++.|.++.||++|+++||++|+++||||||++++.++.+|+++|+|++++|+||||++|||+||||
T Consensus 636 ~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg 715 (954)
T PRK05367 636 EHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPG 715 (954)
T ss_pred ccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCc
Confidence 54467999999999999998558999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Q 001769 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (1016)
Q Consensus 806 ~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~ 885 (1016)
+|++++++++.+++|++.++.++ ...++|.+++++||++++++++|+||++||.+||+++++++++||+|++++
T Consensus 716 ~G~l~vr~~l~p~lpg~~v~~~~------~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~ 789 (954)
T PRK05367 716 VGPIGVKAHLAPFLPGHPVQIAG------GETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKR 789 (954)
T ss_pred eEEEeecccccccCCCCccCcCC------CCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765321 223467888779999999999999999999999999999999999999999
Q ss_pred HhccCCccccCCCCceeeEEEEEecCch-------h-----------------------------------HHHHHHHHH
Q 001769 886 LEKHYPILFRGVNGTVAHEFIVDLRGLK-------E-----------------------------------ELDRYCDAL 923 (1016)
Q Consensus 886 L~~~~~v~y~g~~~~~~he~i~~~~~~~-------~-----------------------------------~ld~f~~~l 923 (1016)
|++++++.|+|.+++++|||++++++.+ + ++|+|+++|
T Consensus 790 L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al 869 (954)
T PRK05367 790 LKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAM 869 (954)
T ss_pred HHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHH
Confidence 9999999999988899999999985311 0 999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCcccCCCcccccccCCCccccccCc
Q 001769 924 ISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 1003 (1016)
Q Consensus 924 ~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k~~~~~~r~~~~~~~~~~~~~~~~ 1003 (1016)
+.|++|+++|++|+||++||+|||||||..++++++|+||||||+|+||++|++++||||||+||||+||||||+|+|||
T Consensus 870 ~~i~~e~~~~~~~~~~~~~~~~~~ap~~~~~~~~~~w~~~y~r~~~~~p~~~~~~~k~~~~~~r~~~~~gd~~~~c~~~~ 949 (954)
T PRK05367 870 IAIRAEIDEVEAGEWPAEDNPLKNAPHTAADLVADEWDHPYSREQAAFPLPSLRANKYWPPVGRIDNVYGDRNLVCSCPP 949 (954)
T ss_pred HHHHHHHHHhhcCCCCCCcchhhhCCCCHHHhccCCCCCCCCHHHhcCCCcccccCCcCCCcCcccccccceeeecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhH
Q 001769 1004 AAQVA 1008 (1016)
Q Consensus 1004 ~~~~~ 1008 (1016)
+|+|+
T Consensus 950 ~~~~~ 954 (954)
T PRK05367 950 IEAYA 954 (954)
T ss_pred hhhcC
Confidence 99874
No 6
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-113 Score=941.47 Aligned_cols=435 Identities=55% Similarity=0.885 Sum_probs=410.6
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-cc--CCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q 001769 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RI--DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKS 169 (1016)
Q Consensus 93 ~~~~~f~~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~--~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~ 169 (1016)
.+.|.|+.|||+|+++|+++||++||++|+||||+++||++| .+ ..+.+ |+++||.|++++|++++++|+.+.+
T Consensus 2 ~~~~~f~~rh~~P~~~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~---~~~~sE~e~l~~l~~ia~kN~~~~s 78 (450)
T COG0403 2 EPLDAFMARHIGPSSADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPL---PKPLSEYEALAELKEIASKNKVFTS 78 (450)
T ss_pred CccchhhhcCCCCChHHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCC---CCCCCHHHHHHHHHHHHhcCchhhh
Confidence 457889999999999999999999999999999998899999 44 22334 4889999999999999999999999
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhc
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN 249 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~ 249 (1016)
|+|+|||+|++|++|+|||++||+|||+|||||||||||+||++||||+++|||||||++|+||||++||++|||+||.|
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc----cCCCEeEEEEEcCCCCe-eeccHHHHHHHHHh
Q 001769 250 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY----KSGDVCGVLVQYPGTEG-EVLDYGDFIKNAHA 324 (1016)
Q Consensus 250 ~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~----l~~~t~~V~v~~pn~~G-~i~dl~eI~~lah~ 324 (1016)
.+++++++|+|++.+||+++++++||++++|++++.++.++++. .+.++++|+||+||++| .+.|+.+|.+.+|+
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~ 238 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHS 238 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhh
Confidence 87556899999999999999999999999999999998876543 24589999999999999 67789999999999
Q ss_pred CCcEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeec
Q 001769 325 NGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAM 404 (1016)
Q Consensus 325 ~GalviV~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~l 404 (1016)
+|++++|++|+++++++++||+|||||+||++|+||+||||||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|
T Consensus 239 ~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaL 318 (450)
T COG0403 239 AGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLAL 318 (450)
T ss_pred cCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC-CeEEcCCCCccEEEEecC
Q 001769 405 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCA 483 (1016)
Q Consensus 405 qtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G-~~~l~~~~~~~~v~i~~~ 483 (1016)
||||||||||||||||||+|+|+|++|++|++|||++||++|++|+++++.||+++|++++ |++++.+.+|++|+++++
T Consensus 319 QTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~ 398 (450)
T COG0403 319 QTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVP 398 (450)
T ss_pred HHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999662 499987799999999998
Q ss_pred -C-HHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001769 484 -D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1016)
Q Consensus 484 -~-~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~~ 530 (1016)
. ...+.++....||+++.++++.+.+|++|++|++||+.|+++|+..
T Consensus 399 ~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 399 EEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hhHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 4 7778888888899999998889999999999999999999999754
No 7
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=6.3e-101 Score=872.68 Aligned_cols=425 Identities=44% Similarity=0.665 Sum_probs=330.3
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCCCCCCC
Q 001769 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNT 178 (1016)
Q Consensus 100 ~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~~lG~g~y~~ 178 (1016)
+||||||++|+++||++||++|+||||+++||+++ ++++++|| +++||.|++||+++|++||+.+.+|+|+|+|+|
T Consensus 1 ~ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp---~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~ 77 (429)
T PF02347_consen 1 MRYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIRLKKPLNLP---EPLSEYELLRHLERLASKNKSYTSFIGAGSYTH 77 (429)
T ss_dssp -------HHHHHHHHHHCT-SSTGGGG-TTS-GGG-SS-------------HHHHHHHHHHHHTTS--TTS---CTTT--
T ss_pred CCCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhcCCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccccccccCc
Confidence 59999999999999999999999999977799999 88899998 789999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEE
Q 001769 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1016)
Q Consensus 179 ~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~V 258 (1016)
++|++|.+++++||+|||+|||||||+|||+||+|||||+|||+|||||++|+|+||++||++||++|+.|.+++++++|
T Consensus 78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~v 157 (429)
T PF02347_consen 78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKV 157 (429)
T ss_dssp ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EE
T ss_pred eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEE
Confidence 99999998899999999999999999999999999999999999999999999999999999999999998774456799
Q ss_pred EEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEecccc
Q 001769 259 IIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA 337 (1016)
Q Consensus 259 lvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~a 337 (1016)
+|++..||+++.+++++++..|++++.++.++-.. .++++++|++|+||++|.++|+++|++++|++|+++++++|+++
T Consensus 158 lv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~a 237 (429)
T PF02347_consen 158 LVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIVGADPNA 237 (429)
T ss_dssp EEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEECGGCCG
T ss_pred EEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEEecCHHH
Confidence 99999999999999999999999999998765322 25799999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccC
Q 001769 338 LTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1016)
Q Consensus 338 lg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaT 417 (1016)
++++++||+|||||+||++|+||+||+|||||+|||+|+++++|+||||+||+|+|.+|+++|+|+||||||||||||||
T Consensus 238 L~~l~~Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 238 LGGLKSPGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp CCTC--GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred HhCcCChhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHc
Q 001769 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKI 495 (1016)
Q Consensus 418 snicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~v~~~L~~~ 495 (1016)
|||||+|+|++++|++|+.+||++||++++++++.+|+||+++|+++.++.+.+..+|++|.+..+. ..++.+++...
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~ 397 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEG 397 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT---
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999742444455677777776654 34466666666
Q ss_pred CceeecccCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 496 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 496 GI~~~~~~~~~lris~te~~t~edid~ll~aL 527 (1016)
|++++....+.+.+|+||++|++|||+|+++|
T Consensus 398 gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 398 GLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 77777666779999999999999999999876
No 8
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-101 Score=841.66 Aligned_cols=416 Identities=59% Similarity=1.026 Sum_probs=385.5
Q ss_pred CCCCcccccC-----CCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHH
Q 001769 558 YLTHPVFNKY-----HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQE 632 (1016)
Q Consensus 558 ~l~lp~~~~~-----~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e 632 (1016)
+|++|+|+.. +||.||+||+++|++||+++|++||||||||||+|+..++.++.||+|.++|||||+++.||+++
T Consensus 30 ~L~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~ 109 (496)
T COG1003 30 YLPHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLE 109 (496)
T ss_pred hcCcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHHH
Confidence 3444444444 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
++.++|+||+++||||.+++||++||+||++++++||+||+++|+.+|++||||+|+||+||++|.|.|++||.|+++++
T Consensus 110 li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~ 189 (496)
T COG1003 110 LIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDEN 189 (496)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCC
Confidence 99999999999999999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCcc
Q 001769 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLH 792 (1016)
Q Consensus 713 g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~h 792 (1016)
|.+|+++|++++. ++|+++|+|||||+|+|+++|.+||+++|++|++||+||||+|++.|+.+||++|+||+++|+|
T Consensus 190 G~VDlddLk~k~~---~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLH 266 (496)
T COG1003 190 GNVDLDDLRAKAE---DNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLH 266 (496)
T ss_pred CCccHHHHHHHhc---cceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeecc
Confidence 9999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCeEEEEEEcccccccCCCCccc-cCCCC-CCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHH
Q 001769 793 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV-STGGI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1016)
Q Consensus 793 K~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g-~~g~~-~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~ 870 (1016)
|||++||||||||+|+|+++++|++++|++..- ..+.| ......+++|. +++||||+++++++|+||++||.+||++
T Consensus 267 KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~-~~a~~Gs~~il~~a~~YI~~mG~~GL~~ 345 (496)
T COG1003 267 KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGV-SAAPYGSASILPIAWAYIRMMGADGLKQ 345 (496)
T ss_pred cccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCcccee-eccccCcchHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999986411 11211 11112234444 4469999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCccccCCCCceeeEEEEEecCchh------------------------------------
Q 001769 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKE------------------------------------ 914 (1016)
Q Consensus 871 ~~~~~~~nA~yla~~L~~~~~v~y~g~~~~~~he~i~~~~~~~~------------------------------------ 914 (1016)
+++.+++||||++++|+++|+++|.|.+ +|.||||+|.++.++
T Consensus 346 ase~AvLNANYia~rL~~~y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIE 424 (496)
T COG1003 346 ASEVAVLNANYIARRLKGYYPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIE 424 (496)
T ss_pred HHHHHHHhHHHHHHHhhhcCccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeec
Confidence 9999999999999999999999999876 899999999885443
Q ss_pred --------HHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCc
Q 001769 915 --------ELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAK 980 (1016)
Q Consensus 915 --------~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k 980 (1016)
+||||||+|+.|++|++++.+| +..+++++++||+..++.+.+|+|||+|++++||+++++.+|
T Consensus 425 PTEsEsk~eLDrf~dami~I~~Ea~~~~~~--~~~~~P~~~a~~r~~e~~a~~~~~p~~R~~~~~p~~~~~~~k 496 (496)
T COG1003 425 PTESESKEELDRFIDAMIAIREEADAVPAG--PLKDNPLNTAPHRLDELLAARWDHPYSREEAAYPLGKLRADK 496 (496)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhccCC--ccccCcccCCcchHHHHhhccCCCCeeeehccccccccccCC
Confidence 9999999999999999999878 778999999999999999999999999999999999988655
No 9
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=7.6e-64 Score=569.39 Aligned_cols=359 Identities=35% Similarity=0.522 Sum_probs=275.3
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHHHHHHHHHHHhccccCCCccccc
Q 001769 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1016)
Q Consensus 514 ~~t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~ 593 (1016)
-+|++|+++|++.++.+ |+|||++ ++||+++++++++ .+| +++||.|++||+++|++||.+ .+++++
T Consensus 5 ~~t~~~~~~ML~~iG~~-----sieeL~~---~~IP~~i~~~~~~-~lp---~~~sE~e~~r~~~~la~kN~~-~~~fiG 71 (429)
T PF02347_consen 5 PPTDEDIQEMLDAIGVK-----SIEELFD---SDIPEEIRLKKPL-NLP---EPLSEYELLRHLERLASKNKS-YTSFIG 71 (429)
T ss_dssp ---HHHHHHHHHHCT-S-----STGGGG----TTS-GGG-SS--------------HHHHHHHHHHHHTTS---TTS---
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHhhcCCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCcccc
Confidence 36899999999999988 8999973 4899999998874 887 569999999999999999998 788999
Q ss_pred cccccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCCce--eeecCChHHHHHHHHHHHHH
Q 001769 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 670 (1016)
Q Consensus 594 LGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~--~l~~~sGa~ae~a~l~air~ 670 (1016)
+|+|+|++|+.+.+..+++++|++ |||||| |++||++|+++|+|+|+|+|||||.+ ++++.++|+|| +++|+.|.
T Consensus 72 ~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aE-a~~ma~r~ 149 (429)
T PF02347_consen 72 AGSYTHYVPAVIDRNILSRPEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAE-AMLMAVRA 149 (429)
T ss_dssp CTTT-----HHHHH-HHCCHHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHH-HHHHHHHH
T ss_pred ccccCceeChhhcCccccChhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHH-HHHHHHHh
Confidence 999999999999998899999998 999999 99999999999999999999999964 78888888888 88888876
Q ss_pred HHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCcccc
Q 001769 671 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1016)
Q Consensus 671 ~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~ 746 (1016)
. + +++++|++|.+.|+.+.+. +...|++++.++++++|..| + ++|++||+++||++|+++
T Consensus 150 ~---~--~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~---~~~a~v~vq~Pn~~G~~e 213 (429)
T PF02347_consen 150 T---K--RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D---DDTAAVMVQNPNTFGVFE 213 (429)
T ss_dssp H---T--T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S---TTEEEEEEESS-TTSB--
T ss_pred c---c--cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c---cCeEEEEeecCCCCceEe
Confidence 3 1 2367999999999988774 45789999999998888877 4 899999999999999999
Q ss_pred ccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCcccc
Q 001769 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1016)
Q Consensus 747 ~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~ 826 (1016)
|+++|++++|++|+++++ ++|+++++++.+||++|+||++++ ||+|++|||||||++|++++++++.++||||++|.
T Consensus 214 -d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~ 290 (429)
T PF02347_consen 214 -DIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQ 290 (429)
T ss_dssp -THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEE
T ss_pred -eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecc
Confidence 899999999999999999 999999999999999999999666 89999999999999999999999999999999985
Q ss_pred C----CC------CCCCC----cCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhccCCc
Q 001769 827 T----GG------IPAPE----KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (1016)
Q Consensus 827 ~----g~------~~~re----~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~~~v 892 (1016)
+ |+ +|+|| |+|+|+|||++ +++++++|++||.++|++||++++++++++|+|++++|++.+.+
T Consensus 291 t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn---qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~ 367 (429)
T PF02347_consen 291 TKDADGKRAFVLTLQTREQHIRREKATSNICTN---QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGL 367 (429)
T ss_dssp EEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBE
T ss_pred cccccccceeeeccccccccccccchhhhhhhh---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3 44 47888 79999999997 88999999999999999999999999999999999999997777
Q ss_pred cccCCCCceeeEEEEEecCc
Q 001769 893 LFRGVNGTVAHEFIVDLRGL 912 (1016)
Q Consensus 893 ~y~g~~~~~~he~i~~~~~~ 912 (1016)
.|. +.+||||++...+.
T Consensus 368 ~~~---~~~f~e~v~~~~~~ 384 (429)
T PF02347_consen 368 PFD---NPFFFEFVVVFSKD 384 (429)
T ss_dssp CSS---SSSBSSEEEEESS-
T ss_pred ccC---CCCceeeeeecCCc
Confidence 775 45788888876553
No 10
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.6e-55 Score=522.23 Aligned_cols=405 Identities=42% Similarity=0.740 Sum_probs=349.3
Q ss_pred hcCCCCccCCCCCCCCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCch
Q 001769 546 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPAD 625 (1016)
Q Consensus 546 ~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e 625 (1016)
.+||+++++++++ .+| + +||.|++|||++|+++|.+.++++|++|+|++++++.+.....++++|++||||||+.
T Consensus 32 ~~ip~~~~~~~~~-~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~ 106 (481)
T PRK04366 32 SLLPEELLRKEPP-ELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEE 106 (481)
T ss_pred ccCCHHHhcCCCC-CCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChh
Confidence 4799999988874 788 3 9999999999999999998788999999999999999999888999999999999944
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEE
Q 001769 626 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 626 ~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv 705 (1016)
.+||.+++++++++++++++|++.+++.+++|+.+++.++++++.+...+|+.++++||+++..|+++...+.+.|++++
T Consensus 107 ~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv 186 (481)
T PRK04366 107 TVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVV 186 (481)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEE
Confidence 99999999999999999999999888999999988866556666665555544567999999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCc
Q 001769 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1016)
Q Consensus 706 ~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaD 785 (1016)
.++++++|.+|+++|+++++ ++|++|++++||++|+++.|+++|+++||++|++++||+|++.++.+...|+++|+|
T Consensus 187 ~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD 263 (481)
T PRK04366 187 EIPSNEDGLVDLEALKAAVG---EDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFD 263 (481)
T ss_pred EeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCC
Confidence 99998889999999999997 789999999999999883389999999999999999999998776666689999999
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCC-C-CCCCcCCCCCCccCCccchhhHHHHHHHHHHHh
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG-I-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~-~-~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~l 863 (1016)
++++++||+|++|||+||||+|++++++++.+++|+++++..|. + .+..++..+.... +..++++.++++|+||..+
T Consensus 264 ~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~-a~t~~~l~~~~a~~~l~~~ 342 (481)
T PRK04366 264 VVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVR-AFYGNFGVLVRAYAYIRSL 342 (481)
T ss_pred EEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcc-cccCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998764432 1 1110111111111 1234678889999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhccCCccccCCCCceeeEEEEEecC------c-------------------------
Q 001769 864 GSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRG------L------------------------- 912 (1016)
Q Consensus 864 G~eGl~~~~~~~~~nA~yla~~L~~~~~v~y~g~~~~~~he~i~~~~~------~------------------------- 912 (1016)
|.+||++++++++.+|+|++++|++.+++.|+ ++++|||++++.. .
T Consensus 343 G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~ 419 (481)
T PRK04366 343 GAEGLREVSEDAVLNANYLKARLKDIYDLPYD---RPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVP 419 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhCcccCC---CCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccC
Confidence 99999999999999999999999988888774 4678998886420 0
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCccCCCCCCCCCccccccccCCcccCCc
Q 001769 913 ------------KEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAK 980 (1016)
Q Consensus 913 ------------~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~k 980 (1016)
++++|+|+++|+.|.+|+.+ +|+.+++|||++
T Consensus 420 ~~l~is~~e~~t~edid~l~~~l~~i~~~~~~--------~~~~~~~~p~~~---------------------------- 463 (481)
T PRK04366 420 EALMIEPTETESKETLDAFIAAMKQIAEEAKE--------NPELVKEAPHNT---------------------------- 463 (481)
T ss_pred CeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh--------CcHhHhhCCCCC----------------------------
Confidence 11899999999999999998 899999999999
Q ss_pred ccCCCcccccccCCCcccccc
Q 001769 981 FWPATGRVDNVYGDRNLICTL 1001 (1016)
Q Consensus 981 ~~~~~~r~~~~~~~~~~~~~~ 1001 (1016)
||+|||++.+.|.++.+|
T Consensus 464 ---~~~~~~~~~~~~~~~~~~ 481 (481)
T PRK04366 464 ---PVRRLDEVKAARKPVLRW 481 (481)
T ss_pred ---CCCCcccccccccCcCCC
Confidence 999999999999998876
No 11
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=4.3e-55 Score=515.67 Aligned_cols=422 Identities=38% Similarity=0.625 Sum_probs=377.8
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCc---cccccCCCC
Q 001769 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGY 175 (1016)
Q Consensus 100 ~~~i~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~---~~~~lG~g~ 175 (1016)
++|||++++|+++||++||++|+|||++ .||+.+ ++.+++|| +++||.|+++++.+++++|.. ..+++|.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~ 77 (447)
T PRK00451 2 MPYIPHTEEDIREMLDAIGVKSIDELFA-DIPEELRLKRPLDLP---PGLSEMELLRHLRELAAKNKTAEEYPSFLGAGA 77 (447)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCHHHHHH-hCCHHHHhCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccCcccc
Confidence 6899999999999999999999999995 699999 77778898 567999999999999988754 567999999
Q ss_pred CCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCC
Q 001769 176 YNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 255 (1016)
Q Consensus 176 y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~g 255 (1016)
+++.+|..+. .++.+++|+++|+||+++.++|.++++.++++++++++|++.+++++++|+|++++++++++... ++
T Consensus 78 ~~~~~p~~~~-~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--~g 154 (447)
T PRK00451 78 YDHYIPAVVD-HIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--KR 154 (447)
T ss_pred cCCcCcHHHH-HHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--CC
Confidence 9999999985 78888899999999999999999999999999999999999989999999999999999887543 68
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch-------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCc
Q 001769 256 KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGV 327 (1016)
Q Consensus 256 d~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~-------~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~Ga 327 (1016)
++|++++..|+++..+++.+++..|++++.++.+ ++++ ++++|++|++++||.+|.+.|+++|+++||++|+
T Consensus 155 ~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~ 234 (447)
T PRK00451 155 KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGA 234 (447)
T ss_pred CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCC
Confidence 9999999999999999988888889999988764 3555 7889999999999999999999999999999999
Q ss_pred EEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccc
Q 001769 328 KVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1016)
Q Consensus 328 lviV~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1016)
+++|+.|.++++.+..++++|+|++++++|+|+.|+.+|||++||+++++++++.+|++++|++.+..++.+|.+.++.+
T Consensus 235 ~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 314 (447)
T PRK00451 235 LFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAR 314 (447)
T ss_pred EEEEEcChHHhccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccc
Confidence 99987677788888888999999999999999999999999999999999999999999999987767888899988999
Q ss_pred cccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HH
Q 001769 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AH 486 (1016)
Q Consensus 408 eqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~ 486 (1016)
++++||+++|+|+|++.++.++.++.++.+++++|++++.+++.+++++++++|++++|+++...+++..+.++++. ..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~~ 394 (447)
T PRK00451 315 EQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPAE 394 (447)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCHH
Confidence 99999999999999999888888888888899999999999999999999999999865888755666666666543 78
Q ss_pred HHHHHHHHcCceee----ccc---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 487 AIASAAYKIEMNLR----VVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 487 ~v~~~L~~~GI~~~----~~~---~~~lris~te~~t~edid~ll~aL~ 528 (1016)
++.++|.++||... ... .+.+|+|+++++|++|+++|+++|.
T Consensus 395 ~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 395 EVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALG 443 (447)
T ss_pred HHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 99999999988642 111 3689999999999999999999985
No 12
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-55 Score=484.74 Aligned_cols=361 Identities=25% Similarity=0.358 Sum_probs=313.3
Q ss_pred CHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHHHHHHHHHHHhccccCCCccccccc
Q 001769 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 595 (1016)
Q Consensus 516 t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LG 595 (1016)
+.+|.+.|+++++.+ |+|+|++ ++||++++.+ . .+++..++++||.|++++++++++||. ...++|+.|
T Consensus 15 ~~~d~~~ML~~iG~~-----Sld~L~~---~~IP~~Ir~~-~-~~~~~~~~~~sE~e~l~~l~~ia~kN~-~~~sfiG~G 83 (450)
T COG0403 15 SSADQQEMLAAIGVS-----SLDELFS---QDIPPSIRKK-L-DTLLPLPKPLSEYEALAELKEIASKNK-VFTSFIGAG 83 (450)
T ss_pred ChHHHHHHHHHcCCC-----CHHHHhh---ccCCHHHHhc-c-cccCCCCCCCCHHHHHHHHHHHHhcCc-hhhhhccCc
Confidence 348999999999998 8999975 5899999865 1 122223478999999999999999998 456889999
Q ss_pred cccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCCce--eeecCChHHHHHHHHHHHHHHH
Q 001769 596 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYH 672 (1016)
Q Consensus 596 s~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~--~l~~~sGa~ae~a~l~air~~~ 672 (1016)
++..+.|+.+.+..+++|+|++ |||||| |+|||.+|+++|+|+++|+||||+.+ |+...++|.|| |++|+.|.
T Consensus 84 yY~~~~P~vI~rnile~pewyTaYTPYQp-EISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE-Am~ma~r~-- 159 (450)
T COG0403 84 YYDTYTPPVILRNILENPEWYTAYTPYQP-EISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE-AMLMAKRV-- 159 (450)
T ss_pred ccCCcCcHHHHHHhhcCccccccCCCCch-hhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH-HHHHHHHh--
Confidence 9999999999988899999999 999999 99999999999999999999999965 45555555555 88888774
Q ss_pred HhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCcccccc
Q 001769 673 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 748 (1016)
Q Consensus 673 ~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~d 748 (1016)
.+ +++++++|+...|...-.. +..+|++|+.++.+ |+++++++ + ..++.+|++++||++|.+++|
T Consensus 160 -~k--~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~d 228 (450)
T COG0403 160 -TK--KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-D--DGDVFGVLVQYPNTFGIVEED 228 (450)
T ss_pred -hc--CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-c--ccCeEEEEEecCCCCCccchh
Confidence 22 2478999999876543333 44688999998875 88899888 4 268999999999999966669
Q ss_pred HHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccC-
Q 001769 749 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST- 827 (1016)
Q Consensus 749 i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~- 827 (1016)
+++|.+++|++|++++| ++++.+++.+.+||++|+||+++++ |.||+|+|||||++|++++++++.+++|||++|.+
T Consensus 229 ~~~l~~~~h~~~al~~v-~aDplaL~LL~pPGe~GADIvvG~~-QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~ 306 (450)
T COG0403 229 LRALIEAAHSAGALVIV-AADPLALGLLKPPGEFGADIVVGSA-QRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSV 306 (450)
T ss_pred HHHHHHHHhhcCCEEEE-EechhHhhccCCccccCCceEEecC-cccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeee
Confidence 99999999999999999 8999999999999999999999998 89999999999999999999999999999999975
Q ss_pred ---CC------CCCCC----cCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc---cCC
Q 001769 828 ---GG------IPAPE----KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK---HYP 891 (1016)
Q Consensus 828 ---g~------~~~re----~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~---~~~ 891 (1016)
|+ +|+|| |+|+|+|||++ +++.+++|.+|+.++|++||++++++.+.+++|++++|++ +++
T Consensus 307 D~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~ 383 (450)
T COG0403 307 DAAGKRAFRLALQTREQHIRREKATSNICTN---QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVE 383 (450)
T ss_pred cCCCCchhhhhHHHHHHHHhhhccchhhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Confidence 44 48888 78999999998 8999999999999999999999999999999999999994 578
Q ss_pred ccccCCCCceeeEEEEEecC
Q 001769 892 ILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 892 v~y~g~~~~~~he~i~~~~~ 911 (1016)
+.+ .++|.||.+++..
T Consensus 384 ~~~----~~fFdt~~v~~~~ 399 (450)
T COG0403 384 LVF----DHFFDTFTVRVPE 399 (450)
T ss_pred ecc----ccceeeEEEecch
Confidence 876 3799999998864
No 13
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=5.3e-54 Score=509.21 Aligned_cols=380 Identities=20% Similarity=0.300 Sum_probs=324.1
Q ss_pred hhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCc-cccccCCCCCCCCChHHHHHHHHhCCCcccccCCChh
Q 001769 126 IDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA 203 (1016)
Q Consensus 126 ~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~-~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~ 203 (1016)
++++||+++ ++++++|| + +||.|+++|+++|+++|.. ..+|+|+|++...+|+.|.++++++++| ++||||||
T Consensus 30 ~~~~ip~~~~~~~~~~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~ 104 (481)
T PRK04366 30 LESLLPEELLRKEPPELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQP 104 (481)
T ss_pred ccccCCHHHhcCCCCCCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCC
Confidence 456799999 88889998 4 9999999999999999987 6799999977777888888899999998 59999999
Q ss_pred H-HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHH-hc---ccc--CCCCEEEEcCCCCHHHHHHHHHhh
Q 001769 204 E-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NN---IQK--GKKKTFIIASNCHPQTIDICITRA 276 (1016)
Q Consensus 204 e-~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a-~~---~~~--~~gd~Vlvs~~~Hps~~~~l~~~a 276 (1016)
| ++||+++.++++|+++++++|++ ++++++++++..+++.|+ .+ ..+ +++++||+++..||++..+++
T Consensus 105 e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~--- 179 (481)
T PRK04366 105 EETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA--- 179 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH---
Confidence 9 99999999999999999999997 689998888776665432 21 111 134599999999999998864
Q ss_pred cCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcCCCCeee-ccHHHHHHHHHhCCcEEEE-Eecccc-ccCCCCC
Q 001769 277 DGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVM-ATDLLA-LTILKPP 344 (1016)
Q Consensus 277 ~~~gi~v~~vd~--------~~L~~-l~~~t~~V~v~~pn~~G~i-~dl~eI~~lah~~GalviV-~a~~~a-lg~l~~p 344 (1016)
..|++++.++. ++|++ ++++|++|++++||++|.+ .|+++|+++||++|++++| ++++.+ ++.+ +|
T Consensus 180 -~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~ 257 (481)
T PRK04366 180 -MAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKA-RP 257 (481)
T ss_pred -HcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccC-Cc
Confidence 46888888765 23555 7789999999999999988 5899999999999999998 677766 4444 78
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 345 g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
+++|||++++++ |+|++|+|+||||+||+++++++.++|||+++|+ +|+ +|++++| |+|||||+++|+ +
T Consensus 258 ~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~----~g~-~~~l~~~-r~~~i~r~~a~t----~ 327 (481)
T PRK04366 258 GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK----DGD-RYRLDYD-RPKSIGRVRAFY----G 327 (481)
T ss_pred cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec----cCC-ceeeccc-ccccCCCccccc----C
Confidence 999999999999 9999999999999999999999999999999984 355 6999998 999999999985 4
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc-CCCCccEEEEecC-----C--HHHHHHHHHHc
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA-----D--AHAIASAAYKI 495 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~-~~~~~~~v~i~~~-----~--~~~v~~~L~~~ 495 (1016)
+++.++++.+|+.++|++|+++++++++.+++||+++|+++ +++. ..++++++.|..+ + +.+++++|.++
T Consensus 328 ~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~ 405 (481)
T PRK04366 328 NFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDY 405 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHC
Confidence 67888888999999999999999999999999999999986 3333 3455667766542 2 78999999999
Q ss_pred Cceeec-----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 496 EMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 496 GI~~~~-----~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
||+++. ...+++|+|+++++|++|||+|+++|..
T Consensus 406 Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 406 GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 998752 2357899999999999999999999974
No 14
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=5.5e-54 Score=525.81 Aligned_cols=399 Identities=19% Similarity=0.254 Sum_probs=342.2
Q ss_pred CCHHHHHHHHHHhC-CC--CHH-----HhhhccCCccc-ccCCCCCCCCCCCC-----CHHHHHHHHHHHhcCCCcc-cc
Q 001769 105 ATPEDQAKMSELVG-LD--NLD-----SLIDATVPKSI-RIDSMKFSKFDEGL-----TESQMIEHMQKLASMNKVY-KS 169 (1016)
Q Consensus 105 ~~~~~~~~ml~~~g-~~--~~~-----~l~~~~iP~~~-~~~~~~lp~~~~~~-----sE~e~~~~l~~la~~n~~~-~~ 169 (1016)
+|.+|++..++.++ .+ .++ +-....||+++ |+.++.+| ++ ||.|++|||++|++||... .+
T Consensus 413 ~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~----~~f~~~~sE~e~~r~~~~L~~kn~~~~~~ 488 (939)
T TIGR00461 413 TTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRN----EVFNMYHSETEMLRYLHRLESKDLALNNS 488 (939)
T ss_pred CCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCC----cccccCCCHHHHHHHHHHHHhcCCCcccc
Confidence 58899999999995 32 111 11222499998 88877776 56 9999999999999999863 58
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhH-HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH-HHHH
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA-MAMC 247 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e-~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA-~~~a 247 (1016)
|+|+|.|.|.+|+.+.+-..++++|+| ||||||| ++||.||+++|+|+|+|++|||+ |+|+++++++.+|+ .+|+
T Consensus 489 fi~lGsctmk~na~v~~l~~s~~ef~t-~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~a 565 (939)
T TIGR00461 489 MIPLGSCTMKLNATAEMMPITWPEFSN-IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AISLQPNSGAQGEYAGLRV 565 (939)
T ss_pred CCCCccCCCccCHHHHHHHhcchhhcC-cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--CcccCCchHHHHHHHHHHH
Confidence 999999999999999855589999999 9999999 99999999999999999999999 59999999999997 6777
Q ss_pred hccc---c--CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCCCCe
Q 001769 248 NNIQ---K--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTEG 310 (1016)
Q Consensus 248 ~~~~---~--~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~---~~t~~V~v~~pn~~G 310 (1016)
.|.. + +++++|++|...|.++-+.+ +..|+++++++. ++|++ ++ +++++|++|+||++|
T Consensus 566 iR~y~~~rge~~R~~vlip~saHgtnPasa----~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G 641 (939)
T TIGR00461 566 IRSYHESRGENHRNICLIPVSAHGTNPASA----AMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHG 641 (939)
T ss_pred HHHHHHhcCCCCCCEEEEEccccCcCHHHH----HHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCc
Confidence 7641 1 25788999999995554443 345888888764 45666 64 589999999999999
Q ss_pred eecc-HHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCce
Q 001769 311 EVLD-YGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1016)
Q Consensus 311 ~i~d-l~eI~~lah~~GalviV-~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgri 387 (1016)
.++| +++|+++||++|++++| ++++.++..+.+|+++||||++++. |+|++|+|+||||+|++++++++.++|||+.
T Consensus 642 ~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~ 721 (939)
T TIGR00461 642 VFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHD 721 (939)
T ss_pred eecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCc
Confidence 9987 99999999999999998 7898889889999999999999998 8899999999999999999999999999999
Q ss_pred EeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCe
Q 001769 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~ 467 (1016)
+|.+.|.+| |+|||| ++||+|+++++.++.+.+|+..+|++||+++++....+|+||+++|++ + +
T Consensus 722 v~~t~d~~g----------req~Ig---a~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~-~ 786 (939)
T TIGR00461 722 VVSMITGIG----------GSKSIG---SVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-H-Y 786 (939)
T ss_pred ccccccCCC----------Cccccc---cccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-c-C
Confidence 886544322 689997 789999999999999999999999999999999999999999999988 4 7
Q ss_pred EEcCC----CCccEEEEecC-------C-HHHHHHHHHHcCceeecc---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 468 EVQGL----PFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 468 ~l~~~----~~~~~v~i~~~-------~-~~~v~~~L~~~GI~~~~~---~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+++.+ +++++|+++.+ . +.+|+++|.++||..... ..+++.+++||.+|++|||+|++++..
T Consensus 787 ~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~ 863 (939)
T TIGR00461 787 PILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIA 863 (939)
T ss_pred cccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHH
Confidence 77632 57899998876 2 789999999999976443 246899999999999999999999963
No 15
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=6.5e-52 Score=503.88 Aligned_cols=350 Identities=22% Similarity=0.318 Sum_probs=308.1
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHHHHHHHHHHHhccccCCCccccc
Q 001769 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1016)
Q Consensus 514 ~~t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~ 593 (1016)
.-|++|+++|++.++.+ |+|+|++ ++||+++|.+++ |.+| +++||.|++++|+++++||.. .+++|+
T Consensus 19 g~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~ir~~~~-l~lp---~~~sE~e~~~~~~~~a~kN~~-~~~fiG 85 (954)
T PRK12566 19 GPDAAEQQAMLDALGVA-----SRAELIE---QTVPPAIRLNRP-LDLP---AALDEQAALARLRGYAEQNQV-WTSLIG 85 (954)
T ss_pred CCCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHHhcCCC-CCCC---CCCCHHHHHHHHHHHHhcCCC-cccccc
Confidence 34789999999999987 8999974 589999988776 4887 689999999999999999976 468889
Q ss_pred cccccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCCc--eeeecCChHHHHHHHHHHHHH
Q 001769 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 670 (1016)
Q Consensus 594 LGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~--~~l~~~sGa~ae~a~l~air~ 670 (1016)
.|++..++|+.+....+++|+|++ |||||| |++||++|+++|+|+|+|+||||+. +++++.++|.|| |++|+.|.
T Consensus 86 ~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQp-EisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~ 163 (954)
T PRK12566 86 MGYHGTVTPTVILRNVLENPGWYTAYTPYQP-EIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRV 163 (954)
T ss_pred ccccCCcCcHHHHHHHHhCchhhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHH
Confidence 999999999999888899999999 999999 9999999999999999999999995 478888888777 88887753
Q ss_pred HHHhcCCCCCCEEEEcCCCccccHHH-------HHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCc
Q 001769 671 YHKARGDHHRNVCIIPVSAHGTNPAT-------AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHG 743 (1016)
Q Consensus 671 ~~~~~g~~~~~~Vlv~~saHg~~~~~-------a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G 743 (1016)
. + +++++|+|+++.| |.+ +...|++++. ++++++++ +++++|++++||++|
T Consensus 164 -~--~--~k~~~~~v~~~~h---P~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~---~~~~~v~vq~P~~~G 221 (954)
T PRK12566 164 -A--K--SKSNRFFVDEHCH---PQTLSVLRTRAEGFGFELVV-----------DAVDNLAA---HAVFGALLQYPDTHG 221 (954)
T ss_pred -h--h--cCCCEEEECCCCC---HHHHHHHHHhhhcCCcEEEE-----------cchhhcCC---CCEEEEEEECCCCce
Confidence 1 1 2367899999866 554 3478999875 33444555 679999999999999
Q ss_pred cccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCc
Q 001769 744 VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP 823 (1016)
Q Consensus 744 ~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~ 823 (1016)
.++ |+++|++++|++|+++++ ++++++++.+.+||++|+||++++. |.||+|||||||+.|++++++++.++||||+
T Consensus 222 ~i~-d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~-Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRi 298 (954)
T PRK12566 222 EIR-DLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGST-QRFGVPMGYGGPHAAYFACRDDYKRAMPGRI 298 (954)
T ss_pred EEc-cHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCC-CcCCCCCCCCCCCeeeeeehHHHHhhCCCCc
Confidence 997 999999999999999765 8999999999999999999997776 9999999999999999999999999999999
Q ss_pred cccC----CC------CCCCC----cCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-
Q 001769 824 VVST----GG------IPAPE----KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK- 888 (1016)
Q Consensus 824 ~g~~----g~------~~~re----~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~- 888 (1016)
+|.+ |+ +|+|| |+|+|+|||++ +++.+.+|.+|+.++|++||++++++++.+|+|++++|++
T Consensus 299 vG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~---qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~ 375 (954)
T PRK12566 299 IGVSRDARGNTALRMALQTREQHIRREKANSNICTA---QVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK 375 (954)
T ss_pred cceeecCCCCeeeehhhhHHHHHhhhccccchhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975 44 47888 79999999998 8999999999999999999999999999999999999987
Q ss_pred cCCccccCCCCceeeEEEEEec
Q 001769 889 HYPILFRGVNGTVAHEFIVDLR 910 (1016)
Q Consensus 889 ~~~v~y~g~~~~~~he~i~~~~ 910 (1016)
++++.+. ++|+||++++.
T Consensus 376 g~~~~~~----~fF~~~~v~~~ 393 (954)
T PRK12566 376 GIKRLNR----HFFDTLTLEVG 393 (954)
T ss_pred CCccccC----CccceEEEEcc
Confidence 7888763 68999999874
No 16
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3e-47 Score=475.07 Aligned_cols=403 Identities=20% Similarity=0.300 Sum_probs=324.0
Q ss_pred cCCCCCHHHHHHHHHHhCCC--CHHHhh-------hccCCccc-ccCCCCCCC-CCCCCCHHHHHHHHHHHhcCCCc-cc
Q 001769 101 RHNSATPEDQAKMSELVGLD--NLDSLI-------DATVPKSI-RIDSMKFSK-FDEGLTESQMIEHMQKLASMNKV-YK 168 (1016)
Q Consensus 101 ~~i~~~~~~~~~ml~~~g~~--~~~~l~-------~~~iP~~~-~~~~~~lp~-~~~~~sE~e~~~~l~~la~~n~~-~~ 168 (1016)
.|--.|++|++..++.++.. +++.+. ...||+++ ++.++.+|. |..-+||.|++|||++|++||.. ..
T Consensus 420 ~~e~~t~~did~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~l~~kn~~~~~ 499 (954)
T PRK05367 420 LDETTTREDLAALLAVFGGAALDVDALDADVADASASALPAALLRTSAYLTHPVFNRYHSETEMMRYLRRLEDKDLALDR 499 (954)
T ss_pred ecccCCHHHHHHHHHHHcccccchhhhhhhhcccccccCCHHHhcCCcccCCcccCCCCCHHHHHHHHHHHHhcCcCccc
Confidence 44447899999999999843 222221 12499999 888777761 12235999999999999999987 45
Q ss_pred cccCCCCCCCCChHHHHHHHHhCCCcccccCCChh-HHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHH-HHHH
Q 001769 169 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA-EIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE-AMAM 246 (1016)
Q Consensus 169 ~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~-e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~e-A~~~ 246 (1016)
+++++|++...+++.+.+.++++|+|++ |||||| |++||+||+++++|+++++|||++ ++++++++++.+| +.++
T Consensus 500 ~~i~lGsct~~~~p~~~~~~~~~~~f~~-~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~ 576 (954)
T PRK05367 500 SMIPLGSCTMKLNAAAEMIPITWPEFAN-LHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLL 576 (954)
T ss_pred ceeeCCcCCCcCCHHHHHHHHhCccccc-cCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHHH
Confidence 6677776666666666679999999966 999999 899999999999999999999998 5999999998888 5556
Q ss_pred Hhcc-c--cC--CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCCCC
Q 001769 247 CNNI-Q--KG--KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTE 309 (1016)
Q Consensus 247 a~~~-~--~~--~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~---~~t~~V~v~~pn~~ 309 (1016)
+.+. . ++ ++++|++++..|+++...+. ..|+++++++. ++|++ ++ +++++|++++||+.
T Consensus 577 a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~----~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~ 652 (954)
T PRK05367 577 AIRAYHESRGEGHRDVCLIPSSAHGTNPASAV----MAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTH 652 (954)
T ss_pred HHHHHhhccCCCCCCEEEEEchhhhhhHHHHH----HCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC
Confidence 6552 1 11 35679999999999887753 45899998765 34655 53 36899999999999
Q ss_pred eee-ccHHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCc
Q 001769 310 GEV-LDYGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1016)
Q Consensus 310 G~i-~dl~eI~~lah~~GalviV-~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgr 386 (1016)
|.+ .|+++|+++||++|++++| ++++.++..+.+|+++|||++++++ |+|++|+|+||||+|++++++.+.++||++
T Consensus 653 G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~ 732 (954)
T PRK05367 653 GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGH 732 (954)
T ss_pred eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCC
Confidence 987 5899999999999999999 6787777777889999999999998 999999999999999999999999999999
Q ss_pred eEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001769 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1016)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~ 466 (1016)
+++.+.+..+. + .. .|+|+| +++.+..+.+|+.++|++|+++++++.+.+|+|++++|++.
T Consensus 733 ~v~~~~~~~~~-g-------------~v-~ta~~g--~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~-- 793 (954)
T PRK05367 733 PVQIAGGETGI-G-------------AV-SAAPFG--SASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH-- 793 (954)
T ss_pred ccCcCCCCCCc-C-------------cc-hhHHHH--HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 87744332111 1 11 256777 57778888999999999999999999999999999999873
Q ss_pred eEEc--C--CCCccEEEEecC------C--HHHHHHHHHHcCceeecc---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 467 VEVQ--G--LPFFDTVKVKCA------D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 467 ~~l~--~--~~~~~~v~i~~~------~--~~~v~~~L~~~GI~~~~~---~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+++. + .++++++.+++. + +.+|+++|.+.||....+ .++.++|++||++|++|||+|++++..
T Consensus 794 ~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~ 871 (954)
T PRK05367 794 YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIA 871 (954)
T ss_pred cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHH
Confidence 5543 2 255677777652 2 689999999999987654 268999999999999999999999963
No 17
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=4.5e-44 Score=444.16 Aligned_cols=403 Identities=20% Similarity=0.280 Sum_probs=332.9
Q ss_pred cCCCCCHHHHHHHHHHhC-CCCHH-------HhhhccCCccc-ccCC-CCCCCCCCCCCHHHHHHHHHHHhcCCCcc-cc
Q 001769 101 RHNSATPEDQAKMSELVG-LDNLD-------SLIDATVPKSI-RIDS-MKFSKFDEGLTESQMIEHMQKLASMNKVY-KS 169 (1016)
Q Consensus 101 ~~i~~~~~~~~~ml~~~g-~~~~~-------~l~~~~iP~~~-~~~~-~~lp~~~~~~sE~e~~~~l~~la~~n~~~-~~ 169 (1016)
-|--+|++|++..++.++ .++++ +-+...||+++ ++.+ |.+|.|..-+||.|++||+++|++||... ++
T Consensus 447 ~~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~ 526 (993)
T PLN02414 447 FDETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEHELLRYLHRLQNKDLSLVHS 526 (993)
T ss_pred eeccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHHHHHHHHHHHhhcccccccC
Confidence 344478999999999995 32222 21223499998 6655 47786666699999999999999999874 57
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhH-HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHH-HHHHH
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE-AMAMC 247 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e-~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~e-A~~~a 247 (1016)
++.+|..-.-+++.+.+..+++|+ ++..+||||+ ..||.++.+.++++++++++|++. +++.+++|+..| +++++
T Consensus 527 ~~plgsctmk~n~~~~~~~~~~~~-~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~--v~f~pnaga~ge~a~~~v 603 (993)
T PLN02414 527 MIPLGSCTMKLNATTEMMPVTWPE-FANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDS--FSLQPNAGAAGEYAGLMV 603 (993)
T ss_pred CccCcccccccCchhhhhhhcCcc-hhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCe--EEEcCCCcHHHHHHHHHH
Confidence 899998888899999888999999 6789999999 999999999999999999999954 999999986544 44444
Q ss_pred hc-cccCCC----CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC---CCEeEEEEEcCCCCe
Q 001769 248 NN-IQKGKK----KTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTEG 310 (1016)
Q Consensus 248 ~~-~~~~~g----d~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~---~~t~~V~v~~pn~~G 310 (1016)
++ +.+.+| ++||++..+|.++..+|.. .|+++++++. ++|++ ++ ++|++|++|+||+.|
T Consensus 604 i~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~----~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~g 679 (993)
T PLN02414 604 IRAYHLSRGDHHRNVCIIPVSAHGTNPASAAM----CGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHG 679 (993)
T ss_pred HHHHHhccCCCCCCEEEeCCCcCccCHHHHHH----CCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccc
Confidence 33 222123 4899999999999999865 4888888764 45666 66 489999999997665
Q ss_pred -eeccHHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCce
Q 001769 311 -EVLDYGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1016)
Q Consensus 311 -~i~dl~eI~~lah~~GalviV-~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgri 387 (1016)
.+.||++|+++||++|++++| ++++.+++.+.+|+++|+||+++++ |+|++|+|+||||+|++++++++.++||+++
T Consensus 680 g~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~ 759 (993)
T PLN02414 680 VYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP 759 (993)
T ss_pred cccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCc
Confidence 556799999999999999998 7888899888899999999999998 8899999999999999999999999999998
Q ss_pred EeeeecCCCCcceeeecccccccccccccCCccch------hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHH
Q 001769 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT------AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 461 (1016)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT------~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L 461 (1016)
+|.+. +| .||++ |+|||| ++++.+..|.+|+..+|++|+++++++++.+++|++++|
T Consensus 760 v~~~~------~~----------~~r~~-~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL 822 (993)
T PLN02414 760 VVPTG------GI----------PRPEK-TQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRL 822 (993)
T ss_pred cccCC------Cc----------ccccC-CCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHH
Confidence 87321 12 24666 899999 888989999999999999999999999999999999999
Q ss_pred hcCCCeEEc--C--CCCccEEEEecC-------C-HHHHHHHHHHcCceeecc---cCCeEEEEeccCCCHHHHHHHHHH
Q 001769 462 KKLGTVEVQ--G--LPFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 526 (1016)
Q Consensus 462 ~~~G~~~l~--~--~~~~~~v~i~~~-------~-~~~v~~~L~~~GI~~~~~---~~~~lris~te~~t~edid~ll~a 526 (1016)
++. +.+. + .++|++|++... . +.+++++|.++||....+ .++++|+++||++|++|||+|+++
T Consensus 823 ~~~--~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~a 900 (993)
T PLN02414 823 EGH--YPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDA 900 (993)
T ss_pred Hhh--CCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHH
Confidence 873 4443 2 267888888765 2 689999999999976543 368899999999999999999999
Q ss_pred HhC
Q 001769 527 FAG 529 (1016)
Q Consensus 527 L~~ 529 (1016)
+..
T Consensus 901 l~~ 903 (993)
T PLN02414 901 LIS 903 (993)
T ss_pred HHH
Confidence 963
No 18
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=384.03 Aligned_cols=351 Identities=23% Similarity=0.334 Sum_probs=298.2
Q ss_pred CHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHHHHHHHHHHHhccccCCCccccccc
Q 001769 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 595 (1016)
Q Consensus 516 t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LG 595 (1016)
++.|..++++.++-+ ++++|. ...+|.+++.++++ .+| ++++|.||+++++.+++||. +.+++|.+|
T Consensus 60 ~~~dq~~ml~tlG~~-----dl~~l~---~~~VP~~Ir~~~~l-~~~---~~~~E~eml~~l~~ia~kNk-~~ksfIGmG 126 (1001)
T KOG2040|consen 60 SPTDQQQMLDTLGYK-----DLDELI---EKTVPKSIRLKRPL-KMD---KPLCESEMLQHLEDIASKNK-IWKSFIGMG 126 (1001)
T ss_pred CchHHHHHHHhcChh-----hHHHHH---Hhhcchhhcccchh-cCC---CCcCHHHHHHHHHHHHhhhh-HHHHhhccc
Confidence 567889999999877 677774 46899999988874 766 78999999999999999997 568999999
Q ss_pred cccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCCc--eeeecCChHHHHHHHHHHHHHHH
Q 001769 596 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYH 672 (1016)
Q Consensus 596 s~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~--~~l~~~sGa~ae~a~l~air~~~ 672 (1016)
++.+++|+.+.....++|+|++ |+|||| |++||.+|.+-++|+++++|||++. +++...++|+|| |+.++.|.
T Consensus 127 Yyn~~vP~~I~RNilenp~W~TqYTPYQ~-EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE-Am~l~~~~-- 202 (1001)
T KOG2040|consen 127 YYNTHVPAVILRNILENPGWYTQYTPYQA-EISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE-AMALCNRI-- 202 (1001)
T ss_pred cccccCcHHHHHHhhhCCcceeccCCCch-hhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH-HHHHHHhh--
Confidence 9999999999999999999999 999999 9999999999999999999999984 578888888777 88777664
Q ss_pred HhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCcccccc
Q 001769 673 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 748 (1016)
Q Consensus 673 ~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~d 748 (1016)
.+|+++++....|.-.-.. +..+|++++..+ +++... ..+++++|+++||++.|-+. |
T Consensus 203 -----~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~~~~~~----s~~~v~gvlvQYP~t~G~i~-d 264 (1001)
T KOG2040|consen 203 -----NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------IKEADY----SSKDVSGVLVQYPDTEGSVL-D 264 (1001)
T ss_pred -----cccceEEecCCCCcchhhhhhccccccceeEEecC--------HHHhhc----cccceeEEEEEcCCCCCccc-C
Confidence 3566788888777533333 335677765543 332211 12679999999999999998 9
Q ss_pred HHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccC-
Q 001769 749 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST- 827 (1016)
Q Consensus 749 i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~- 827 (1016)
..++++.+|+.|.++++ ++++.++..+.+||++|+||+++|. |.|++|+|+|||+.||+++++++.+.||||++|.+
T Consensus 265 ~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk 342 (1001)
T KOG2040|consen 265 FDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK 342 (1001)
T ss_pred HHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence 99999999999999988 7889999999999999999999988 99999999999999999999999999999999865
Q ss_pred ---CC------CCCCC----cCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 828 ---GG------IPAPE----KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 828 ---g~------~~~re----~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
|+ +|+|| |+++|+|||++ +++.+..+.+|-.++|++||++++++....+.+|+..|+. +.++.
T Consensus 343 D~~gk~a~RLALQTREQHIrRDKATSNICTA---QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~ 419 (1001)
T KOG2040|consen 343 DALGKEAYRLALQTREQHIRRDKATSNICTA---QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQ 419 (1001)
T ss_pred cccccHHHHHHHHHHHHHhhhhccchhhhHH---HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhc
Confidence 44 47777 68999999987 8999999999999999999999999999999999999986 55665
Q ss_pred ccCCCCceeeEEEEEec
Q 001769 894 FRGVNGTVAHEFIVDLR 910 (1016)
Q Consensus 894 y~g~~~~~~he~i~~~~ 910 (1016)
. ..+|..+-+++.
T Consensus 420 ~----k~fFDTLkI~~~ 432 (1001)
T KOG2040|consen 420 H----KPFFDTLKIRCG 432 (1001)
T ss_pred c----ccccceEEEEec
Confidence 3 345666655554
No 19
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-40 Score=361.22 Aligned_cols=389 Identities=20% Similarity=0.294 Sum_probs=302.8
Q ss_pred CCCCHHHhhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccc-cccCCCCCCCCChHHHHHHHHhCCCccc
Q 001769 118 GLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYK-SFIGMGYYNTHVPPVILRNIMENPAWYT 196 (1016)
Q Consensus 118 g~~~~~~l~~~~iP~~~~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~-~~lG~g~y~~~~p~~i~~~i~~~~~~~t 196 (1016)
|++..++-.+..+|+.++.+.+.+| .+||.|++||+.+|+++|.... .++=+|..-.-+++.+.+.....|+| .
T Consensus 19 ~~~l~~~~~~~~L~~~~~r~~~~~P----e~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f-~ 93 (496)
T COG1003 19 GYSLPEQVVEEYLPHPVFRRYPPLP----EHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEF-A 93 (496)
T ss_pred ccccccccchhhcCcHHhhcCCCCc----cccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccch-h
Confidence 4444444445557777733323346 7999999999999999998753 35555555555888887778888884 5
Q ss_pred ccCCChhH-HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH-HHHHh-ccc--c--CCCCEEEEcCCCCHHHH
Q 001769 197 QYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA-MAMCN-NIQ--K--GKKKTFIIASNCHPQTI 269 (1016)
Q Consensus 197 ~ytPyq~e-~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA-~~~a~-~~~--~--~~gd~Vlvs~~~Hps~~ 269 (1016)
..+||||| ..||.++.+.++|++++++||||. +||.+.+.+..|- -+|++ +++ + +.|+.+||+++.|..+-
T Consensus 94 ~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP 171 (496)
T COG1003 94 NIHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP 171 (496)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh
Confidence 58999999 899999999999999999999998 9999888777774 24443 333 2 25789999999995554
Q ss_pred HHHHHhhcCCCeEEEEe--------Cchhhhc-cCCCEeEEEEEcCCCCeeec-cHHHHHHHHHhCCcEEEE-Eeccccc
Q 001769 270 DICITRADGFDIKVVVS--------DLKDIDY-KSGDVCGVLVQYPGTEGEVL-DYGDFIKNAHANGVKVVM-ATDLLAL 338 (1016)
Q Consensus 270 ~~l~~~a~~~gi~v~~v--------d~~~L~~-l~~~t~~V~v~~pn~~G~i~-dl~eI~~lah~~GalviV-~a~~~al 338 (1016)
+-. .-.|++|+.| |+++|++ ++++++++++||||+.|.++ +|.+|+++.|++|++|++ ||++.++
T Consensus 172 ASA----am~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~ 247 (496)
T COG1003 172 ASA----AMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAI 247 (496)
T ss_pred hhH----hhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhh
Confidence 432 2348888875 4567887 78999999999999999997 899999999999999999 8899888
Q ss_pred cCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccC
Q 001769 339 TILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1016)
Q Consensus 339 g~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaT 417 (1016)
..+..||++|+||+..+. |+|.+|+|.||||+|-+.|++.+.++||++. .. .+ +.. |.+....+ ..+.|- .
T Consensus 248 vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~-~~--~~~-y~~~~~~~-~s~g~~--~ 319 (496)
T COG1003 248 VGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VY-HD--VGE-YRLDYDGK-KSIGVS--A 319 (496)
T ss_pred hccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-cc-CC--Ccc-ccccCCCC-ccceee--c
Confidence 778899999999999999 9999999999999999999999999999865 21 11 111 22221111 122222 2
Q ss_pred CccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-C--CCccEEEEecC------C--HH
Q 001769 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--PFFDTVKVKCA------D--AH 486 (1016)
Q Consensus 418 snicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~-~--~~~~~v~i~~~------~--~~ 486 (1016)
+++.+... -..+-+|+..+|++||++..+...-+|+|++++|+.. ++++- + ...+++++... + +.
T Consensus 320 a~~Gs~~i--l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~ 395 (496)
T COG1003 320 APYGSASI--LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRAL 395 (496)
T ss_pred cccCcchH--HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHH
Confidence 23332222 3456779999999999999999999999999999973 66652 2 24578888765 3 78
Q ss_pred HHHHHHHHcCceeec-----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 487 AIASAAYKIEMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 487 ~v~~~L~~~GI~~~~-----~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+|+++|.+.|++.+. +..++++|.+||+.+++++|+|++++..
T Consensus 396 DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~ 443 (496)
T COG1003 396 DVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA 443 (496)
T ss_pred HHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence 999999999997543 4579999999999999999999999963
No 20
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=2e-35 Score=342.82 Aligned_cols=375 Identities=45% Similarity=0.654 Sum_probs=302.3
Q ss_pred HHHHHHHHHHHhcCCCccc---cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCC
Q 001769 150 ESQMIEHMQKLASMNKVYK---SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1016)
Q Consensus 150 E~e~~~~l~~la~~n~~~~---~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~ 226 (1016)
|.||++|+++++++|.... ..+|.|..+|..|..+.+...+. ...+.|+||.+..++|..+...++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 5699999999998887543 47888888899999987444444 4568899999989999999999999999999999
Q ss_pred CCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCC
Q 001769 227 PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1016)
Q Consensus 227 ~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~~ 297 (1016)
+..++.++.+++.++++++++.....+++|+|++++..|+++...+....+..|++++.++. +++++ ++++
T Consensus 80 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 159 (398)
T cd00613 80 DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE 159 (398)
T ss_pred CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC
Confidence 87677788877766676555443321248999999999999999987765566788887654 34555 7788
Q ss_pred EeEEEEEcCCCCeeeccH-HHHHHHHHhCCcEEEEEeccccc-cCCCCCCcccceEEEecC-ccccccCCCCCcceEEEE
Q 001769 298 VCGVLVQYPGTEGEVLDY-GDFIKNAHANGVKVVMATDLLAL-TILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1016)
Q Consensus 298 t~~V~v~~pn~~G~i~dl-~eI~~lah~~GalviV~a~~~al-g~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~ 374 (1016)
|++|++++|+.+|.+.|+ ++|+++||++|++++|+. .++. .....++++|+|++++++ |++ .|++.|||++||++
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~-~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~ 237 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDG-DNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFA 237 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEe-ccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEE
Confidence 999999999988999985 999999999999999953 2222 234556889999999999 666 99999999999999
Q ss_pred eehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001769 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1016)
Q Consensus 375 ~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1016)
+++++.+.+++..+|+..+..+.+.|.+.+..+..+.|||++|+|+++...+.+..+...+..++.+|++++.+++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNA 317 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999888875443344457776666778889999999999988888777777788889999999999999999
Q ss_pred HHHHHHHhcCCCeEEcCCCCccEEEEecC---C--HHHHHHHHHHcCceeecc---cCCeEEEEeccCCCHHHHHHHHHH
Q 001769 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 526 (1016)
Q Consensus 455 ~~L~~~L~~~G~~~l~~~~~~~~v~i~~~---~--~~~v~~~L~~~GI~~~~~---~~~~lris~te~~t~edid~ll~a 526 (1016)
++++++|+++++......+++..+.+.++ + +.+++++|.++||.+... .++.||+|++.+||++|||+++++
T Consensus 318 ~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 318 NYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred HHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 99999999986333223344445566654 3 678999999999987653 458899999999999999999987
Q ss_pred H
Q 001769 527 F 527 (1016)
Q Consensus 527 L 527 (1016)
|
T Consensus 398 L 398 (398)
T cd00613 398 L 398 (398)
T ss_pred C
Confidence 5
No 21
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=3.7e-34 Score=337.80 Aligned_cols=372 Identities=24% Similarity=0.354 Sum_probs=284.2
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhhcCCCCccCCCCCCCCcccccCCCHHHHHHHHHHHhccccCCCcccccc
Q 001769 515 TTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (1016)
Q Consensus 515 ~t~edid~ll~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~L 594 (1016)
|+++|++.|++.|+.+ |+|+|++ .||+.++++.+. +|| ++.||.++++++.+++++|...+...+++
T Consensus 7 ~~~~~~~~~~~~~~~~-----~~~~~~~----~~p~~~~~~~~~-~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~l 73 (447)
T PRK00451 7 HTEEDIREMLDAIGVK-----SIDELFA----DIPEELRLKRPL-DLP---PGLSEMELLRHLRELAAKNKTAEEYPSFL 73 (447)
T ss_pred CCHHHHHHHHHHhCCC-----CHHHHHH----hCCHHHHhCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccC
Confidence 6899999999999987 8999974 899999988874 788 45699999999999998886655567788
Q ss_pred ccccCCCChhhh-hcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCCh-HHHHHHHHHHHHHH
Q 001769 595 GSCTMKLNATTE-MMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAY 671 (1016)
Q Consensus 595 Gs~t~~~~~~~~-~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sG-a~ae~a~l~air~~ 671 (1016)
|.|.+.+..... .......++.+ |+||+| +.++|.++.+.++++++++++|++...+..++| +++.++++++++.
T Consensus 74 g~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~- 151 (447)
T PRK00451 74 GAGAYDHYIPAVVDHIISRSEFYTAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRI- 151 (447)
T ss_pred cccccCCcCcHHHHHHHhchhHHHhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh-
Confidence 875554432222 22233445654 999999 889999999999999999999998666544444 4444455554432
Q ss_pred HHhcCCCCCCEEEEcCCCccccHHHHH----hCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccc
Q 001769 672 HKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEE 747 (1016)
Q Consensus 672 ~~~~g~~~~~~Vlv~~saHg~~~~~a~----~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~ 747 (1016)
.++++|++++.+|+++...+. ..|++++.++++++ .+|+++|+++|+ ++|++|++++||++|.++
T Consensus 152 ------~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~---~~t~~v~l~~pn~tG~v~- 220 (447)
T PRK00451 152 ------TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD---DDTAAVVVQYPNFFGVIE- 220 (447)
T ss_pred ------cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC---CCeEEEEEECCCCCCeeC-
Confidence 256799999999988887654 47999999999887 999999999997 889999999999999998
Q ss_pred cHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccC
Q 001769 748 GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (1016)
Q Consensus 748 di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~ 827 (1016)
|+++|+++||++|++++++ .+..+++.+..|+++|+|++++++|| |++|+.+||||+|++++++++.+.+|+++++++
T Consensus 221 ~l~~I~~~a~~~~~~~iv~-~d~~~~g~~~~~~~~~~D~~~~s~~k-~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~ 298 (447)
T PRK00451 221 DLEEIAEIAHAGGALFIVG-VDPVSLGLLKPPGEYGADIVVGEGQP-LGIPLSFGGPYLGFFATRKKLVRQMPGRLVGET 298 (447)
T ss_pred CHHHHHHHHHHCCCEEEEE-cChHHhccCCCcccCCCCEEEECCCc-CCCCCCCCCCCchHHHhhHHHHhhCCCCEeeee
Confidence 8999999999999999983 23334555567899999999999876 778999999999999999999888888776653
Q ss_pred CC------C----CC----CCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc--CC
Q 001769 828 GG------I----PA----PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YP 891 (1016)
Q Consensus 828 g~------~----~~----re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~--~~ 891 (1016)
.. + +. ..+.+++.++++. .......+++++..++.+|++++.++...+++++.++|++. ++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 375 (447)
T PRK00451 299 VDADGKRGFVLTLQAREQHIRREKATSNICTN---QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVE 375 (447)
T ss_pred cccCCCeeeEeecccccccccccccccccccc---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 11 0 11 1123445555532 22333556778888999999999999999999999999873 55
Q ss_pred ccccCCCCceeeEEEEEecCchhHHHHHHHHHH
Q 001769 892 ILFRGVNGTVAHEFIVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 892 v~y~g~~~~~~he~i~~~~~~~~~ld~f~~~l~ 924 (1016)
+. . +.+++.+++++.. ..++|++.|.
T Consensus 376 ~~-~---~~~~~~~~v~~~~---~~~~~~~~L~ 401 (447)
T PRK00451 376 LF-D---GPFFNEFVVRLPK---PAEEVNEALL 401 (447)
T ss_pred ec-C---CCeEEEEEEecCC---CHHHHHHHHH
Confidence 53 3 3466777777632 2345555553
No 22
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-31 Score=310.15 Aligned_cols=360 Identities=19% Similarity=0.158 Sum_probs=275.6
Q ss_pred HHHHHHHHHHhcCC---CccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCC
Q 001769 151 SQMIEHMQKLASMN---KVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1016)
Q Consensus 151 ~e~~~~l~~la~~n---~~~~~~lG~g~y~~~~p~~i~~~i~~~~-~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~ 226 (1016)
..+++.+..+.+.- ..|.+.-+.+ ..|..+.+.+.+.- .|+...+......++-.-+.+.+.++.+|+++|+
T Consensus 6 ~~~r~~fp~l~~~~~~~~vylD~aa~~----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a 81 (405)
T COG0520 6 AAVRADFPALKREVGKPLVYLDNAATS----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNA 81 (405)
T ss_pred HHHHhhCHHHhhccCCCeEEecCcccc----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 34677777776542 3344333333 37777766665321 1223334444457777888999999999999999
Q ss_pred CC-ccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--------hhhc-cCC
Q 001769 227 PM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSG 296 (1016)
Q Consensus 227 ~~-anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--------~L~~-l~~ 296 (1016)
+. .++.++.++|.++..+..++.....+||+||+++.+|++++.+|+.+++..|+++++++++ +++. +++
T Consensus 82 ~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~ 161 (405)
T COG0520 82 DSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP 161 (405)
T ss_pred CCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC
Confidence 95 8899999999888877766641113789999999999999999999998889999998753 3555 788
Q ss_pred CEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCcceEEE
Q 001769 297 DVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFL 373 (1016)
Q Consensus 297 ~t~~V~v~~-pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl 373 (1016)
+|++|.+++ +|.+|.+.|+++|+++||++|++++|++ .++.+.+ .+..++|+|++++|+ |+|++|. |.|+|
T Consensus 162 ~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDa-aq~~~h~~idv~~l~~Df~afsgHKwl~gP~-----GiGvL 235 (405)
T COG0520 162 KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDA-AQAAGHLPIDVQELGCDFLAFSGHKWLLGPT-----GIGVL 235 (405)
T ss_pred CceEEEEECccccccccchHHHHHHHHHHcCCEEEEEC-ccccCccCCCchhcCCCEEEEcccccccCCC-----ceEEE
Confidence 999999987 6899999999999999999999999942 2344433 246889999999999 5475553 57899
Q ss_pred EeehhhhhcCCCceEee-eecCCCC-cceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001769 374 ATSQEYKRMMPGRIVGV-SIDSSGK-PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 451 (1016)
Q Consensus 374 ~~~~~l~~~lpgrivG~-s~d~~g~-~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~ 451 (1016)
|+|+++++.|+|...|+ +.+.... ..+. ..+...|.|.||+|| .+.+++.+++ .++...|+++|.++++
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~~----~~~~p~rfe~gTpn~---~~~i~l~aAl--~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVT----LAELPLRFEAGTPNI---AGAIGLAAAL--DYLLEIGMEAIEAHER 306 (405)
T ss_pred EEchHHHhhcCCcccCCCceeeeccccccc----ccCcchhhccCCchH---HHHHhHHHHH--HHHHHHhHHHHHHHHH
Confidence 99999999998888775 2221111 1111 234567889999999 4555666776 7777888999999999
Q ss_pred HHHHHHHHHHhcCCCeEEcCCC---CccEEEEecCC--HHHHHHHHHHcCceeecc------------cCCeEEEEeccC
Q 001769 452 GLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDET 514 (1016)
Q Consensus 452 ~~a~~L~~~L~~~G~~~l~~~~---~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~te~ 514 (1016)
++++|+.+.|+++.++++++.+ ....++|++++ +.++++.|.++||.++.- ..+.+|+|++.|
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~Y 386 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLY 386 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeec
Confidence 9999999999999669998643 45578888877 899999999999987642 134599999999
Q ss_pred CCHHHHHHHHHHHhC
Q 001769 515 TTLEDVDKLFIVFAG 529 (1016)
Q Consensus 515 ~t~edid~ll~aL~~ 529 (1016)
||++|||+|+++|+.
T Consensus 387 Nt~edid~l~~aL~~ 401 (405)
T COG0520 387 NTEEDVDRLLEALKK 401 (405)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999964
No 23
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=3.7e-29 Score=290.42 Aligned_cols=335 Identities=40% Similarity=0.606 Sum_probs=251.5
Q ss_pred HHHHHHHHHHHhccccCCCccccccccccCCCChhhhhccccc--ccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCC
Q 001769 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTW--PSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1016)
Q Consensus 570 E~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~--~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~ 647 (1016)
|+||+||+++++++|...+.+++.||.|++.++.+........ ..+..|+||.| ..++|..++..++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQP-EISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCCh-hhhhhHHHHHHHHHHHHHHHHCC
Confidence 6799999999999999888888999999998877655433221 12334777776 67899999999999999999999
Q ss_pred C--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCC----cEEEEEcCCCCCCCCHHHHH
Q 001769 648 D--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----MKIVSVGTDAKGNINIEELR 721 (1016)
Q Consensus 648 ~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G----~~vv~v~~d~~g~iD~~~L~ 721 (1016)
+ .+.+..++|++++ +++++++. .+ +++++|+++++.|+++...+...| ++++.+++++++.+|+++++
T Consensus 80 ~~~~v~~~~~g~~~~~-~~~~~~~~---~~--~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (398)
T cd00613 80 DVANASLQDEATAAAE-AAGLAAIR---AY--HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALK 153 (398)
T ss_pred CccceeccCchHHHHH-HHHHHHHh---cc--cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHH
Confidence 8 3445544554444 33333322 11 147899999999999988877766 99999999877889999999
Q ss_pred HHHHcCCCCEEEEEEEcCCCCcccccc-HHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCC
Q 001769 722 KAAEANRDNLSTLMVTYPSTHGVYEEG-IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHG 800 (1016)
Q Consensus 722 ~~i~~~~~~t~~v~i~~Pn~~G~i~~d-i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg 800 (1016)
++++ ++|++|++++|+++|.+. | +++|+++||++|+++++|+++..+. +..+++.+++|++++++||++ +|+|
T Consensus 154 ~~i~---~~t~~viv~~~~~~G~~~-~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~-~p~g 227 (398)
T cd00613 154 EEVS---EEVAALMVQYPNTLGVFE-DLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTG-VPHG 227 (398)
T ss_pred HhcC---CCeEEEEEECCCCCceec-chHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccC-CCCC
Confidence 9997 789999999999889997 6 5999999999999999999875433 456788999999999999999 9999
Q ss_pred CCCCeEEEEEEcccccccCCCCccccCCC----------CC----CCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGG----------IP----APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 801 ~GGPg~G~i~~~~~l~~~lpg~~~g~~g~----------~~----~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+|||++|++++++++.+.+++...++.+. +. ...+++.+.++. .++...+..+++++..++.+
T Consensus 228 ~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~---~~~~~~~~~a~~~l~~~~~~ 304 (398)
T cd00613 228 GGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNIC---TGQALLALMAAMYIVYLGPE 304 (398)
T ss_pred CCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccce---ecHHHHHHHHHHHHHHhCHH
Confidence 99999999999988877776554332110 00 001123334433 33566777889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCccccCCCCceeeEEEEEecCc-hhHHHHHHHHH
Q 001769 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL-KEELDRYCDAL 923 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~~-~~v~y~g~~~~~~he~i~~~~~~-~~~ld~f~~~l 923 (1016)
|+.++.++..++++|+.++|++. ....+ .+...+.+.++++.. ....++|++.|
T Consensus 305 g~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~L 360 (398)
T cd00613 305 GLKEIAERAHLNANYLAKRLKEVGGVLPF---NGPFFHEFVLRLPPLYGIRAEDLAKAL 360 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCeeEEEEEEcCCcchHHHHHHHHhh
Confidence 99999999999999999999873 33222 234556666776531 12334455554
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=5.5e-26 Score=265.05 Aligned_cols=361 Identities=16% Similarity=0.093 Sum_probs=254.6
Q ss_pred HHHHHHHHHHhcC----CCccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHHcC
Q 001769 151 SQMIEHMQKLASM----NKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG 225 (1016)
Q Consensus 151 ~e~~~~l~~la~~----n~~~~~~lG~g~y~~~~p~~i~~~i~~~~-~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G 225 (1016)
..++.++.-+... ...|.|+-+.+. .|..+.+.+...- .++....+.....++-..+.+.++++.+|+++|
T Consensus 6 ~~~r~~fp~~~~~~~~~~~iYld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 81 (406)
T PRK09295 6 EKVRADFPVLSREVNGLPLAYLDSAASAQ----KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFIN 81 (406)
T ss_pred HHHHhhCccccCcCCCCceEEEeCccccc----CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcC
Confidence 3455556555321 235666666664 4444443443211 011111111112344566778899999999999
Q ss_pred C-CCccEEEccchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-c
Q 001769 226 L-PMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-K 294 (1016)
Q Consensus 226 ~-~~anasl~~~~Taa~eA~~~a~~~~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l 294 (1016)
. ++.++.+++|+|.++..++.++... .++||+||+++.+|+++...|+.+++..|++++.++. ++|++ +
T Consensus 82 ~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i 161 (406)
T PRK09295 82 ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALF 161 (406)
T ss_pred cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhc
Confidence 8 5678889999998887766554211 1378999999999999999988877788999888753 44655 7
Q ss_pred CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCcceEE
Q 001769 295 SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAF 372 (1016)
Q Consensus 295 ~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~lg~P~g~GGP~~Gf 372 (1016)
+++|++|++++| |.+|.+.|+++|+++||++|++++||+ .++++... +..++|+|++++|++|+.+| +|.||
T Consensus 162 ~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp-----~G~G~ 235 (406)
T PRK09295 162 DERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLYGP-----TGIGI 235 (406)
T ss_pred CCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEc-ccccCccccCchhcCCCEEEeehhhccCC-----CCcEE
Confidence 788999999987 689999999999999999999999943 34555432 33578999999999556444 34789
Q ss_pred EEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001769 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHG 452 (1016)
Q Consensus 373 l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~ 452 (1016)
+++++++.+.+|+...|++......... ....++...|+|.||.|+ .++.++.+++ .++...|++++.+++.+
T Consensus 236 l~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~r~e~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~~~~ 308 (406)
T PRK09295 236 LYVKEALLQEMPPWEGGGSMIATVSLTE--GTTWAKAPWRFEAGTPNT---GGIIGLGAAL--DYVSALGLNNIAEYEQN 308 (406)
T ss_pred EEEchHhHhhCCCcccCCceeeeeecCC--ccccCCchhhcCCCCccH---HHHHHHHHHH--HHHHHhCHHHHHHHHHH
Confidence 9999999888887665532210000000 011123445789999998 4566666665 55556789999999999
Q ss_pred HHHHHHHHHhcCCCeEEcCC-CCccEEEEecCC--HHHHHHHHHHcCceeecc------------cCCeEEEEeccCCCH
Q 001769 453 LAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTL 517 (1016)
Q Consensus 453 ~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~te~~t~ 517 (1016)
++++++++|+++++++++.+ .....++|.+++ +.++.+.|.++||.++.- .++.+|+|++.+||+
T Consensus 309 l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~ 388 (406)
T PRK09295 309 LMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH 388 (406)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCH
Confidence 99999999999854888753 223457777665 788999999999988531 136799999999999
Q ss_pred HHHHHHHHHHh
Q 001769 518 EDVDKLFIVFA 528 (1016)
Q Consensus 518 edid~ll~aL~ 528 (1016)
+|||+|+++|.
T Consensus 389 ~did~l~~~l~ 399 (406)
T PRK09295 389 EEVDRLVAGLQ 399 (406)
T ss_pred HHHHHHHHHHH
Confidence 99999999995
No 25
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=5e-25 Score=256.45 Aligned_cols=362 Identities=16% Similarity=0.088 Sum_probs=254.6
Q ss_pred CCHHHHHHHHHHHhcCCCccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCC
Q 001769 148 LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1016)
Q Consensus 148 ~sE~e~~~~l~~la~~n~~~~~~lG~g~y~~~~p~~i~~~i~~~~-~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~ 226 (1016)
++-.++++++..+. .+..|.+.-+.|. +|..+.+.+.+.- +|+...+.......+...+.+.++++.+|+++|.
T Consensus 4 ~~~~~~r~~fp~l~-~~~~yld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~ 78 (401)
T PRK10874 4 FNPAQFRAQFPALQ-DAGVYLDSAATAL----KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA 78 (401)
T ss_pred CCHHHHHHhCCCcC-CceEEEeCCcccC----CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34455666666542 3456666666664 4444433332110 1111111112224456677888999999999999
Q ss_pred -CCccEEEccchHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC
Q 001769 227 -PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 295 (1016)
Q Consensus 227 -~~anasl~~~~Taa~eA~~~a~~~-~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~ 295 (1016)
++.++.+.+|+|.++..++.++.. ..++||+||+++.+|++++..|+.+++..|++++.++. +++++ ++
T Consensus 79 ~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~ 158 (401)
T PRK10874 79 PDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT 158 (401)
T ss_pred CCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC
Confidence 677898999999988887766521 01378999999999999988888777788999888754 34555 77
Q ss_pred CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCcceEEE
Q 001769 296 GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFL 373 (1016)
Q Consensus 296 ~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl 373 (1016)
++|++|++.+| |.+|.+.|+++|+++||++|++++||+ ..+++.+ .+..++|+|++++|++|+.+| ||+|++
T Consensus 159 ~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l 232 (401)
T PRK10874 159 PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDG-AQGAVHFPADVQALDIDFYAFSGHKLYGP-----TGIGVL 232 (401)
T ss_pred cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEC-CcccccccCCchhcCCCEEEEecccccCC-----CccEEE
Confidence 89999999987 689999999999999999999999942 3444433 233578999999998445333 357999
Q ss_pred EeehhhhhcCCCceEeee-ecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHH
Q 001769 374 ATSQEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHG 452 (1016)
Q Consensus 374 ~~~~~l~~~lpgrivG~s-~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~ 452 (1016)
++++++.+.+++...|.. .+. ..|. ....++.+.|.+.||.|+ .+..++.+++ .++...|+.++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~e~Gt~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~ 303 (401)
T PRK10874 233 YGKSELLEAMSPWQGGGKMLTE---VSFD-GFTPQSAPWRFEAGTPNV---AGVIGLSAAL--EWLADIDINQAESWSRS 303 (401)
T ss_pred EEchHHHhcCCCeecCCcceEe---eccC-ccCCCCChhhccCCCcCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHH
Confidence 999999988876543321 000 0010 111223445778899998 4555666665 55566788899999999
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeecc------------cCCeEEEEeccCCCHH
Q 001769 453 LAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLE 518 (1016)
Q Consensus 453 ~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~te~~t~e 518 (1016)
+++++++.|+++.|+++...+....+.|.+++ ..++.+.|.++||.++.. ..+.+|+|++.+||++
T Consensus 304 l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~e 383 (401)
T PRK10874 304 LATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQS 383 (401)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHH
Confidence 99999999999833887643322345556554 788999999999987542 1478999999999999
Q ss_pred HHHHHHHHHhC
Q 001769 519 DVDKLFIVFAG 529 (1016)
Q Consensus 519 did~ll~aL~~ 529 (1016)
|+++++++|..
T Consensus 384 did~ll~al~~ 394 (401)
T PRK10874 384 DVDALVNAVDR 394 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999999963
No 26
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.94 E-value=6.5e-25 Score=255.29 Aligned_cols=356 Identities=17% Similarity=0.107 Sum_probs=251.0
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCCCChHHHHHHHHhC---CCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCC-
Q 001769 152 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMEN---PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP- 227 (1016)
Q Consensus 152 e~~~~l~~la~~n~~~~~~lG~g~y~~~~p~~i~~~i~~~---~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~- 227 (1016)
++++++..+. .+..|.+.-+.|. +|..+.+.+.+. ...-..+.+|. ..+-..+.+.++++.+|+++|.+
T Consensus 5 ~~r~~fp~l~-~~~iyld~a~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~la~~~g~~~ 77 (398)
T TIGR03392 5 QFRQQFPALQ-DGTVYLDSAATAL----KPQAVIDATQQFYRLSSGTVHRSQHQ--QAQSLTARYELARQQVARFLNAPD 77 (398)
T ss_pred HHHHhCCccC-CCeEEeeCccccC----CCHHHHHHHHHHHHhcCCCCCCcccH--HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3455555432 3456666666664 445554444321 11111122332 33445567888999999999995
Q ss_pred CccEEEccchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCC
Q 001769 228 MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1016)
Q Consensus 228 ~anasl~~~~Taa~eA~~~a~~~~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~~ 297 (1016)
+.++.+++|+|.++..++.++... .++||+||+++..|+++...+...++..|++++.++. +++++ ++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR 157 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC
Confidence 678889999998888777665210 1378999999999999888887777788999988764 34555 6788
Q ss_pred EeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEe
Q 001769 298 VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLAT 375 (1016)
Q Consensus 298 t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~ 375 (1016)
|++|++.+| |.+|.+.|+++|+++||++|++++||+ ..+++... +..++++|++++|++|+.+| ++.||+++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~~ 231 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG-AQGVVHGPPDVQALDIDFYAFSGHKLYGP-----TGIGVLYG 231 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCCCCChhhcCCCEEEEecccccCC-----CceEEEEE
Confidence 999999987 689999999999999999999999943 33444332 23568999999999555434 34799999
Q ss_pred ehhhhhcCCCceEeeee-cCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001769 376 SQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1016)
Q Consensus 376 ~~~l~~~lpgrivG~s~-d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1016)
++++++.+++...|... +... + .....++.+.|+|.||.|+ .+..++.+++ .++...|++++.+++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~e~GT~~~---~~~~a~~~al--~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 232 KTELLEAMPPWQGGGKMLSHVS---F-DGFIPQAVPHRFEAGTPNI---AGVIGLSAAL--EWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred cHHHHhhCCCeecCCceEeecc---c-cccccCCChhhccCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHH
Confidence 99998888765433211 1000 0 0112234456778999998 4555666665 5555678899999999999
Q ss_pred HHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeecc------------cCCeEEEEeccCCCHHHH
Q 001769 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLEDV 520 (1016)
Q Consensus 455 ~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~te~~t~edi 520 (1016)
+++++.|+++.++++...+....+.|.+++ +.++.+.|.++||.++.. .++.||+|++.+||++|+
T Consensus 303 ~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999999999844887643333356666655 788999999999988632 146899999999999999
Q ss_pred HHHHHHHhC
Q 001769 521 DKLFIVFAG 529 (1016)
Q Consensus 521 d~ll~aL~~ 529 (1016)
++++++|+.
T Consensus 383 ~~l~~~l~~ 391 (398)
T TIGR03392 383 DALVDAVGA 391 (398)
T ss_pred HHHHHHHHH
Confidence 999999963
No 27
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=6.9e-25 Score=257.29 Aligned_cols=309 Identities=17% Similarity=0.125 Sum_probs=232.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCC-CccEEEccchHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 207 QGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~-~anasl~~~~Taa~eA~~~a~~~-~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
.-..+.+.++++.+|+++|.+ ..++.++.|+|.++..++.++.. ..++|++|+++..+||++...++.+++..|++++
T Consensus 72 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~ 151 (424)
T PLN02855 72 AKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK 151 (424)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEE
Confidence 334566788999999999996 46899999999887776654321 0137899999999999999999887878899988
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEE
Q 001769 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1016)
Q Consensus 285 ~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivv 353 (1016)
.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++||+ .++.+... +..++|+|+++
T Consensus 152 ~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-a~~~g~~~~~~~~~~~d~~~ 230 (424)
T PLN02855 152 FVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDA-CQSVPHMPVDVQTLGADFLV 230 (424)
T ss_pred EEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCcCCCchhcCCCEEE
Confidence 8754 34555 7788999999987 689999999999999999999999942 33444332 34678999999
Q ss_pred ecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 354 gs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
++++|+.+| ++.||+++++++++.+++.+.|++.... . |......++.+.|++.||+|+ .++.++.+++
T Consensus 231 ~s~~K~~gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~--~-~~~~~~~~~~~~r~e~GT~~~---~~~~~l~~al 299 (424)
T PLN02855 231 ASSHKMCGP-----TGIGFLWGKSDLLESMPPFLGGGEMISD--V-FLDHSTYAPPPSRFEAGTPAI---GEAIGLGAAI 299 (424)
T ss_pred eecccccCC-----CccEEEEEchhhhhcCCCEecCCCceee--e-ecCccccCCChhhccCCChHH---HHHHHHHHHH
Confidence 999656433 3579999999999899887666431100 0 100000123455788999998 4555555555
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC------CccEEEEecCC--HHHHHHHHHHc-Cceeecc--
Q 001769 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV-- 502 (1016)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~------~~~~v~i~~~~--~~~v~~~L~~~-GI~~~~~-- 502 (1016)
.++...|++++.+++.+++++|++.|+++.|++++.+. ....++|.+++ +.++.+.|.++ ||.++.-
T Consensus 300 --~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~ 377 (424)
T PLN02855 300 --DYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHH 377 (424)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhh
Confidence 55666799999999999999999999998449887431 22457777765 78899999887 9987631
Q ss_pred ----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 503 ----------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 ----------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.++.+|+|++.+||++|+++|+++|..
T Consensus 378 c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 378 CAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 136799999999999999999999963
No 28
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=1.4e-25 Score=258.34 Aligned_cols=327 Identities=22% Similarity=0.206 Sum_probs=240.4
Q ss_pred CChHHHHHHHHhCC-CcccccCC--ChhHHhhhHHHHHHHHHHHHHHHcCCCC-ccEEEccchHHHHHHHHHHhccccCC
Q 001769 179 HVPPVILRNIMENP-AWYTQYTP--YQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKGK 254 (1016)
Q Consensus 179 ~~p~~i~~~i~~~~-~~~t~ytP--yq~e~sqG~le~i~e~q~~iA~L~G~~~-anasl~~~~Taa~eA~~~a~~~~~~~ 254 (1016)
.+|..+.+++...- .++. .| .....+....+.+.++++.+++++|++. .++.+..++|.+++.++.++....++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYA--NPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGS--STSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred CCCHHHHHHHHHHHHHhhh--cCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc
Confidence 57777766665321 1111 11 1122455567888999999999999998 78888999999988888777321137
Q ss_pred CCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh
Q 001769 255 KKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA 324 (1016)
Q Consensus 255 gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~ 324 (1016)
+++|+++..+|+++..+|...++..|+++++++. +++++ +++++++|++++. +.+|.+.|+++|+++||+
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~ 167 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHE 167 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhc
Confidence 8999999999999999999888788999988764 34555 7899999999875 789999999999999999
Q ss_pred CCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeee-ecCCCCcceee
Q 001769 325 NGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-IDSSGKPALRV 402 (1016)
Q Consensus 325 ~GalviV~a~~~alg~l-~~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s-~d~~g~~~~~l 402 (1016)
+|++++||+ ..++|.+ .+..++|+|++++++|||++ +||+|++++++++.+++.+...|+. .+. ..+
T Consensus 168 ~~~~~~vD~-~~~~g~~~id~~~~~~D~~~~s~~Kl~g-----p~G~g~l~v~~~~~~~~~p~~~~~~~~~~-----~~~ 236 (371)
T PF00266_consen 168 YGALLVVDA-AQSAGCVPIDLDELGADFLVFSSHKLGG-----PPGLGFLYVRPEAIERLRPAKPGGGYLDF-----PSL 236 (371)
T ss_dssp TTSEEEEE--TTTTTTSS--TTTTTESEEEEESTSTTS-----SSTEEEEEEEHHHHHHHHTSSSSSSTTTH-----HHH
T ss_pred cCCceeEec-hhccccccccccccccceeeecccccCC-----CCchhhheehhhhhhcccccccccccccc-----ccc
Confidence 999999943 3456654 34578999999999955854 4578999999998888865555532 110 000
Q ss_pred e-cccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC----CCccE
Q 001769 403 A-MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDT 477 (1016)
Q Consensus 403 ~-lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~----~~~~~ 477 (1016)
. ...+....|++.||.|+. .++++..++ .++...|++++.+|..++++++++.|+++++++++.+ .....
T Consensus 237 ~~~~~~~~~~~~~~GT~~~~---~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i 311 (371)
T PF00266_consen 237 QEYGLADDARRFEGGTPNVP---AIYALNEAL--KLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSI 311 (371)
T ss_dssp HHHCHHSTTTGSSSSS--HH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTE
T ss_pred hhcccccccccccccceeee---hhhhHHHHH--hhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccce
Confidence 0 001233456678899984 445555555 5556789999999999999999999999976888652 12235
Q ss_pred EEEecCC--HHHHHHHHHHcCceeecc------------cCCeEEEEeccCCCHHHHHHH
Q 001769 478 VKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLEDVDKL 523 (1016)
Q Consensus 478 v~i~~~~--~~~v~~~L~~~GI~~~~~------------~~~~lris~te~~t~edid~l 523 (1016)
++|.+++ +.++.+.|.++||.++.- ..+.||+|++.+||++|||+|
T Consensus 312 ~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 312 VSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 6676665 889999999999987651 138999999999999999986
No 29
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=4.1e-24 Score=239.46 Aligned_cols=290 Identities=17% Similarity=0.182 Sum_probs=225.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHh--ccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN--NIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 208 G~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~--~~~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
-..+++.+.++.||+++|+++.++.+++|||.+...++.+. ... ++++++||++..+||+++.+++.+ +..|++|.
T Consensus 41 ~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vt 119 (386)
T COG1104 41 EARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEE
Confidence 45688999999999999999999999999998877666552 211 136889999999999999999987 77899999
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEE
Q 001769 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1016)
Q Consensus 285 ~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivv 353 (1016)
++++ ++|++ |++||.+|.+++. |.+|+|+||++|+++|+++|++++||+ ..++|.++ ++.++|+|++.
T Consensus 120 yl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDA-vQa~Gkipi~~~~~~vD~ls 198 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDA-VQAVGKIPIDLEELGVDLLS 198 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEeh-hhhcCceeccccccCcceEE
Confidence 9765 45777 8999999999987 589999999999999999999999943 34667553 55788999999
Q ss_pred ecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 354 gs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
.|+++|++|.| .|++|+++.. .+.+.+.| |.+ -..+-.||.|+ .++.|+..|+
T Consensus 199 ~SaHK~~GpkG-----iGaLyv~~~~--~~~p~i~G------GgQ-----------E~g~RsGTenv---~~Ivg~~~A~ 251 (386)
T COG1104 199 FSAHKFGGPKG-----IGALYVRPGV--RLEPLIHG------GGQ-----------ERGLRSGTENV---PGIVGFGKAA 251 (386)
T ss_pred eehhhccCCCc-----eEEEEECCCC--ccCceecc------CcC-----------CCCCCCCCccH---HHHHHHHHHH
Confidence 99999977754 6789997654 24445555 211 11234699998 4555555555
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEEcCC--CC-ccEEEEecCC--HHHHHHHHHHcCceeec------
Q 001769 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PF-FDTVKVKCAD--AHAIASAAYKIEMNLRV------ 501 (1016)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G~~~l~~~--~~-~~~v~i~~~~--~~~v~~~L~~~GI~~~~------ 501 (1016)
. +..+.++....++..+-++|.+.|.+. +.+.+.+. +. .+.+.|.+++ ++.+.-.|..+||.++.
T Consensus 252 ~---~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS 328 (386)
T COG1104 252 E---IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSS 328 (386)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccC
Confidence 3 234566777888899999999999976 54666543 22 3567788887 88888889889998742
Q ss_pred -----------c------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 502 -----------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 502 -----------~------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
. -.+.||+|++.+||++|++.++++|..
T Consensus 329 ~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 329 GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999964
No 30
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.93 E-value=1.3e-23 Score=244.50 Aligned_cols=305 Identities=18% Similarity=0.140 Sum_probs=226.7
Q ss_pred HHHHHHHHHHHHHHHcCCC-CccEEEccchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 209 RLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 209 ~le~i~e~q~~iA~L~G~~-~anasl~~~~Taa~eA~~~a~~~~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
..+.+.++++.+|+++|++ ..++.+.+|+|.++..++.++... .+++++||+++.+|+++...++..++..|++++.+
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v 139 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI 139 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE
Confidence 4456788999999999998 568889999998877766654211 13789999999999999988887777789998887
Q ss_pred Cc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEec
Q 001769 287 DL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGS 355 (1016)
Q Consensus 287 d~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvgs 355 (1016)
+. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|+. .++.+.+ .+..++|+|+++++
T Consensus 140 ~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s 218 (403)
T TIGR01979 140 PLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDG-AQAVPHMPVDVQALDCDFYVFS 218 (403)
T ss_pred ecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEc-hhhcCccccCccccCCCEEEEe
Confidence 64 34555 7788999999987 689999999999999999999999943 4455543 23457899999999
Q ss_pred CccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeee-cccccccccccccCCccchhhHHHHHHHHHH
Q 001769 356 AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 356 ~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~-lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
++|+.+| +++||+++++++.+.+++...|+.... .+.+. ...+....|++.||.|+ ..++++.+++
T Consensus 219 ~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~gt~~~---~~~~al~~al- 285 (403)
T TIGR01979 219 GHKMYGP-----TGIGVLYGKEELLEQMPPFLGGGEMIA----EVSFEETTYNEAPHKFEAGTPNI---AGVIGLGAAI- 285 (403)
T ss_pred cccccCC-----CCceEEEEchHHHhcCCCeecCCCcee----ecccCccccCCChhhcCCCCccH---HHHHHHHHHH-
Confidence 9445333 347899999999888876655532110 00000 00112234567788887 3444555554
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC----CccEEEEecCC--HHHHHHHHHHcCceeecc------
Q 001769 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1016)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~----~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~------ 502 (1016)
.++...|++++.+++.+++++++++|+++++++++.+. ....+.|.+++ ..++.+.|.++||.++..
T Consensus 286 -~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~ 364 (403)
T TIGR01979 286 -DYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQP 364 (403)
T ss_pred -HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHH
Confidence 55556689999999999999999999998449887532 13356666654 678999999999987531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 ------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+|+|++.+||++|+++++++|.
T Consensus 365 ~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 365 LMRRFGVPATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred HHHHhCCCCEEEEEeccCCCHHHHHHHHHHHH
Confidence 15789999999999999999999996
No 31
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=3e-23 Score=240.93 Aligned_cols=298 Identities=19% Similarity=0.189 Sum_probs=220.7
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001769 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1016)
Q Consensus 206 sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1016)
+++..+.+.++++.+++++|.+..++.+..++|.++..+..++...-++|++||+++..|+++...+...++..|++++.
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 134 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKW 134 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE
Confidence 46777888999999999999987778888888877665554442111378999999999999998887667778998887
Q ss_pred eCc---------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEE
Q 001769 286 SDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (1016)
Q Consensus 286 vd~---------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivv 353 (1016)
++. +++++ +++++++|++.+| |.+|.+.|+++|+++||++|++++||. .++.+.. .+..++|+|+++
T Consensus 135 ~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~ 213 (397)
T TIGR01976 135 ARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDA-VHYAPHGLIDVQATGADFLT 213 (397)
T ss_pred EeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEeh-hhhccccCCCHHHcCCCEEE
Confidence 654 33555 7778999999988 689999999999999999999999943 3333322 234578999999
Q ss_pred ecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 354 gs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
++++|+. ||..||+++++++++.+.+....+ .. .....|.+.||.|+ ..+.++.+++
T Consensus 214 ~s~~K~~------g~~~G~l~~~~~~~~~l~~~~~~~----------~~----~~~~~~~~~gt~~~---~~~~~l~~al 270 (397)
T TIGR01976 214 CSAYKFF------GPHMGILWGRPELLMNLPPYKLTF----------SY----DTGPERFELGTPQY---ELLAGVVAAV 270 (397)
T ss_pred Eechhhc------CCceEEEEEcHHHHhhCCCccccC----------cc----CCCcchhcCCCCCH---HHHHHHHHHH
Confidence 9984442 245799999999888775433221 11 11234567899987 3444555555
Q ss_pred -HHHHhCc-----------ccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC----CCccEEEEecCC--HHHHHHHHHHc
Q 001769 434 -YAVYHGP-----------EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAYKI 495 (1016)
Q Consensus 434 -y~~~~g~-----------~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~----~~~~~v~i~~~~--~~~v~~~L~~~ 495 (1016)
++...|. ++++++.+++.+++++++++|+++++++++.+ ...+.+.+..++ +.++.++|.++
T Consensus 271 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (397)
T TIGR01976 271 DYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQ 350 (397)
T ss_pred HHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHC
Confidence 3333332 14788899999999999999999865888743 123456666554 78899999999
Q ss_pred Cceeecc---------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 496 EMNLRVV---------------DSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 496 GI~~~~~---------------~~~~lris~te~~t~edid~ll~aL 527 (1016)
||.++.. ..+.+|+|++.++|++|+++++++|
T Consensus 351 gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 351 GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 9988642 2357999999999999999999875
No 32
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=1.6e-23 Score=244.52 Aligned_cols=293 Identities=14% Similarity=0.095 Sum_probs=212.0
Q ss_pred HHcCCCCccEEEccchHHHHHHHHHHhccccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEE----EEeC--------c
Q 001769 222 DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKV----VVSD--------L 288 (1016)
Q Consensus 222 ~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~-~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v----~~vd--------~ 288 (1016)
+++|+++.++.+.+++|.++..++.++ +..+ ++++|++++.+||++..+|+..++..|+++ +.++ +
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 158 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL 158 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH
Confidence 899999889999999998888776665 2211 234789999999999998876566678776 3333 2
Q ss_pred hhhhc-c---CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccc
Q 001769 289 KDIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 289 ~~L~~-l---~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~-k~lg~ 361 (1016)
+++++ + +++|++|+++++ |.+|.+.|+++|+++||++|++++|+ ..+++|.++ +..++|+|++++++ |+|+
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD-~aq~~G~~~id~~~~gvD~~~~s~hK~l~- 236 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFD-LAHAVGNVPLDLHDWGVDFACWCTYKYLN- 236 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEE-cccccCCcccccccCCCCEEEEcCccccC-
Confidence 34544 3 578999999987 57899999999999999999999994 345666543 34689999999999 5553
Q ss_pred cCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcc
Q 001769 362 PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 441 (1016)
Q Consensus 362 P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~ 441 (1016)
|||| |+++++++....+.+++.||.-..... .|........+..|++.||+|+ .+++++.+++ .++...
T Consensus 237 ----g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~ 305 (406)
T TIGR01814 237 ----AGPG-AGAFVHEKHAHTERPRLAGWWGHARPT-RFKMDNTLGLIPCGFRISNPPI---LSVAALRGSL--DIFDQA 305 (406)
T ss_pred ----CCCC-eEEEEehhhhhhcCCCCCcccCCCCcc-ccccccccCCCccceeeCCccH---HHHHHHHHHH--HHHHhc
Confidence 4566 667776655444555566652111000 0111110112334778899998 5566666665 566677
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcC-C---CeEEcCCC----CccEEEEecC-CHHHHHHHHHHcCceeecccCCeEEEEe-
Q 001769 442 GLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLP----FFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASF- 511 (1016)
Q Consensus 442 Gl~~ia~~~~~~a~~L~~~L~~~-G---~~~l~~~~----~~~~v~i~~~-~~~~v~~~L~~~GI~~~~~~~~~lris~- 511 (1016)
|++++.+++..+++++++.|+++ | +++++.+. ....++|.++ .+.++.+.|.++||.+....++.||+|+
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~~~iRiS~~ 385 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREPSVIRVAPV 385 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCCCeEEEech
Confidence 99999999999999999999875 2 37777531 1235677776 4889999999999988654567899999
Q ss_pred ccCCCHHHHHHHHHHHh
Q 001769 512 DETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 512 te~~t~edid~ll~aL~ 528 (1016)
+.+||++||++++++|.
T Consensus 386 ~~~nt~~did~l~~~l~ 402 (406)
T TIGR01814 386 PLYNTFVDVYDAVNVLE 402 (406)
T ss_pred hccCCHHHHHHHHHHHH
Confidence 68999999999999986
No 33
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=7.4e-23 Score=235.60 Aligned_cols=307 Identities=19% Similarity=0.152 Sum_probs=228.2
Q ss_pred HhhhHHHHHHHHHHHHHHHcCCC-CccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001769 205 IAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1016)
Q Consensus 205 ~sqG~le~i~e~q~~iA~L~G~~-~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v 283 (1016)
.++...+.+.++++.+++++|.+ ..++.+++|+|.++..++.++.....++++|+++...|++....+...++..|+++
T Consensus 37 ~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~ 116 (373)
T cd06453 37 LSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKL 116 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEE
Confidence 34566777888999999999998 66788899999887777666542101689999999999998887776666778888
Q ss_pred EEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001769 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (1016)
Q Consensus 284 ~~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDiv 352 (1016)
+.++. +++++ +++++++|++.+| |.+|.+.|+++|.++||++|+++++++ .++.+.+. +..++|+|++
T Consensus 117 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~ 195 (373)
T cd06453 117 KVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDG-AQSAGHMPVDVQDLGCDFL 195 (373)
T ss_pred EEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEh-hhhcCceeeeccccCCCEE
Confidence 88754 34555 6778999999887 679999999999999999999999953 34555442 3457899999
Q ss_pred EecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeee-ecCCCCcceeeecccccccccccccCCccchhhHHHHHH
Q 001769 353 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (1016)
Q Consensus 353 vgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s-~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~ 430 (1016)
++++ |+|+ +|+.|++++++++++.+.....|+. .+......+ +....+.+++.+|+|++ +++++.
T Consensus 196 ~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~t~~~~---~~~al~ 262 (373)
T cd06453 196 AFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET----TYADLPHKFEAGTPNIA---GAIGLG 262 (373)
T ss_pred EeccccccC------CCCcEEEEEchHHhhcCCCeecCCCcccccccccc----ccCCCccccCCCCCCHH---HHHHHH
Confidence 9998 5553 3557899999999888876554431 110000001 11233455677888874 444555
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--CccEEEEecCC--HHHHHHHHHHcCceeecc----
Q 001769 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD--AHAIASAAYKIEMNLRVV---- 502 (1016)
Q Consensus 431 Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~--~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~---- 502 (1016)
+++ .++..+|++++.++..++++++++.|+++++++++.++ ....+.|..++ +.++.++|.++||.++..
T Consensus 263 ~al--~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~ 340 (373)
T cd06453 263 AAI--DYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCA 340 (373)
T ss_pred HHH--HHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccch
Confidence 554 66777899999999999999999999998558887422 22345666654 789999999999987421
Q ss_pred --------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 503 --------DSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 503 --------~~~~lris~te~~t~edid~ll~aL 527 (1016)
.++.||+|++.++|++|+|+|+++|
T Consensus 341 ~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 341 QPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1478999999999999999999875
No 34
>PLN03032 serine decarboxylase; Provisional
Probab=99.92 E-value=4.2e-23 Score=236.41 Aligned_cols=242 Identities=18% Similarity=0.239 Sum_probs=178.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCcee---eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~~~---l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~v 704 (1016)
....+++.++.+++++++|++... +++++|++++..++.+.|.+ .++.+|+++..+|.+..+.++.+|+++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~------~~~~~vi~s~~~H~Sv~kaa~~lg~~~ 135 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMEA 135 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh------CCCcEEEeCCCceeHHHHHHHHcCCCC
Confidence 367899999999999999998532 55566666665444444432 123589999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcC-----cEEEEEccccccccCcC-
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG-----GQVYMDGANMNAQVGLT- 777 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g-----~lv~vDga~~~a~~~l~- 777 (1016)
+.||+|++|.+|+++|+++|++...++.+|+++..| .+|.++ ||++|+++|+++| +++|||+|+..+...+.
T Consensus 136 ~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id-pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 136 VKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD-DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred eEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC-CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC
Confidence 999999999999999999998422357888888875 689999 9999999999997 48999998754333221
Q ss_pred -C---CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHH
Q 001769 778 -S---PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1016)
Q Consensus 778 -~---pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~ 853 (1016)
. ....++|.+++|+||+++.|. |+|++++++++.+.+.... .|... ..... .+| . ++..+
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~~-----~Yl~~-~d~ti--~gS-R--~g~~~ 278 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQNV-----EYLNS-RDATI--MGS-R--NGHAP 278 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccCC-----cccCC-CCCcc--cCC-C--chHHH
Confidence 1 123579999999999876553 5788999976554332110 01000 01111 111 1 12456
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
+..|+.|+.+|.+|+++++++++++|+|+.++|++ ++++
T Consensus 279 l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~ 318 (374)
T PLN03032 279 LYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTC 318 (374)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 77899999999999999999999999999999987 4443
No 35
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=5e-23 Score=236.77 Aligned_cols=283 Identities=17% Similarity=0.143 Sum_probs=214.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHh-ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001769 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~-~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1016)
....+.+.++++.+++++|.+..++.+..++|.++..++.++ ....+++++|+++..+||++...++.+. ..|++++.
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~ 117 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTY 117 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEE
Confidence 344677889999999999998888889999998766654433 2111368999999999999999887654 56888887
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001769 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1016)
Q Consensus 286 vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvg 354 (1016)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ .++.|.+ .+..++|+|++++
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~-a~~~g~~~~~~~~~~~D~~~~ 196 (364)
T PLN02651 118 LPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDA-AQAVGKIPVDVDDLGVDLMSI 196 (364)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEc-chhhCCcccCcccCCCCEEEe
Confidence 754 34555 7888999999886 689999999999999999999999942 4455543 3567899999999
Q ss_pred cCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH
Q 001769 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 355 s~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
+++||++| ++.|++++++++..++.+.+.|.. +..+++.||.|+ .+++++.+++
T Consensus 197 s~hK~~gp-----~G~g~l~v~~~~~~~l~p~~~g~~-----------------~~~~~~~GT~~~---~~~~~l~~al- 250 (364)
T PLN02651 197 SGHKIYGP-----KGVGALYVRRRPRVRLEPLMSGGG-----------------QERGRRSGTENT---PLVVGLGAAC- 250 (364)
T ss_pred chhhhCCC-----CceEEEEEcCCCCCCCCccccCCC-----------------ccCCccCCCccH---HHHHHHHHHH-
Confidence 99667544 357999999988888876665521 012456899998 5666777776
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCC--CC---ccEEEEecCC--HHHHHHHHHHcCceeec-----
Q 001769 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--PF---FDTVKVKCAD--AHAIASAAYKIEMNLRV----- 501 (1016)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~-~G~~~l~~~--~~---~~~v~i~~~~--~~~v~~~L~~~GI~~~~----- 501 (1016)
.++. ++.+++.+++.+++++++++|++ ++|++++.+ +. ...++|.+++ +.+++++|.+ |.++.
T Consensus 251 -~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~ 326 (364)
T PLN02651 251 -ELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACT 326 (364)
T ss_pred -HHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcC
Confidence 3333 24589999999999999999986 534998853 21 2357777766 7889999965 65531
Q ss_pred ------------c------cCCeEEEEeccCCCHHHHH
Q 001769 502 ------------V------DSNTVTASFDETTTLEDVD 521 (1016)
Q Consensus 502 ------------~------~~~~lris~te~~t~edid 521 (1016)
+ ..+.||+|++.+||++|||
T Consensus 327 ~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 327 SASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 1 1378999999999999985
No 36
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=1.1e-22 Score=234.86 Aligned_cols=292 Identities=17% Similarity=0.179 Sum_probs=216.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001769 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1016)
Q Consensus 206 sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1016)
+....+.+.++++.+++++|.+..++.+++++|.++++++.++.....++++|+++..+||++...++... ..|++++.
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-~~G~~v~~ 115 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHH-HcCCEEEE
Confidence 34456778899999999999998889999999988887666542111256899999999999999887654 47888888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001769 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1016)
Q Consensus 286 vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvg 354 (1016)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|| ...+.|... +..++|+|++++
T Consensus 116 v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD-~~~~~g~~~~~~~~~~~D~~~~ 194 (379)
T TIGR03402 116 LPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTD-AVQAVGKIPIDLKEMNIDMLSL 194 (379)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEE-CcccccccccCcccCCCCEEEE
Confidence 754 34555 7788999999886 68999999999999999999999994 344555433 346789999999
Q ss_pred cCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH
Q 001769 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 355 s~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
+++|+++| +|+|+++++++. .+.+.+.|. . +..+++.||.|+ .+++++.+++
T Consensus 195 s~~K~~gp-----~G~g~l~v~~~~--~~~p~~~g~------~-----------~~~~~~~gt~~~---~~~~~l~~al- 246 (379)
T TIGR03402 195 SGHKLHGP-----KGVGALYIRKGT--RFRPLLRGG------H-----------QERGRRAGTENV---PGIVGLGKAA- 246 (379)
T ss_pred cHHHcCCC-----CceEEEEECCCC--CCCCcccCC------c-----------cCCCcCCCCccH---HHHHHHHHHH-
Confidence 99557544 357899998764 233333331 0 011245789888 5566666665
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCCC--Cc-cEEEEecCC--HHHHHHHHHHcCceeecc------
Q 001769 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP--FF-DTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1016)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~-~G~~~l~~~~--~~-~~v~i~~~~--~~~v~~~L~~~GI~~~~~------ 502 (1016)
.+. .++++++.+++.++.++++++|++ +.++++..++ .. ..+.|.++. +.++.+.|.++||.++.-
T Consensus 247 -~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~ 324 (379)
T TIGR03402 247 -ELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSG 324 (379)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCC
Confidence 222 346788889999999999999986 6448776532 11 245555443 788999999999987531
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 503 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 -----------------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+.||+|++.+||++||++++++|..
T Consensus 325 ~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 325 SLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999964
No 37
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=8.1e-24 Score=240.95 Aligned_cols=316 Identities=18% Similarity=0.208 Sum_probs=244.1
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|.+.+||||++.+|..+.+++. .+.+. ++..+ .++...|+.+.+.++|+.+|+++|.|. +.+|.+|..++.+
T Consensus 43 nf~SNdYLGLa~~~~~~~a~~~-~~~~~---g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~ 114 (388)
T COG0156 43 NFCSNDYLGLASHPELIEAAKA-AIRRY---GVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLG 114 (388)
T ss_pred eeeccCcccccCCHHHHHHHHH-HHHHh---CCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHH
Confidence 5567899999999988888875 55543 33333 667889999999999999999999997 8899999999999
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCC---C--EeEEEEEcC--CCCeeeccH
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG---D--VCGVLVQYP--GTEGEVLDY 315 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~~---~--t~~V~v~~p--n~~G~i~dl 315 (1016)
++-++. +++|.|+.++.+|.|.++.++ +.+..-+.+.+.|+++|++ +.+ . .+.++|+.. ++.|++.||
T Consensus 115 ~i~~l~---~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 115 LLSALL---KKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHHhc---CCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 888874 378999999999999999997 3555667777889988887 532 1 245556654 899999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCCc-----cc-----ceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCC
Q 001769 316 GDFIKNAHANGVKVVMATDLLALTILKPPGE-----LG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1016)
Q Consensus 316 ~eI~~lah~~GalviV~a~~~alg~l~~pg~-----~G-----aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lp 384 (1016)
++|++++++||++++| ++.|+.|++.+-|. +| +||+++|. |.||. .| ||+.++..+++.+
T Consensus 191 ~~l~~L~~ky~a~L~V-DEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G----g~v~g~~~~~d~L- 261 (388)
T COG0156 191 PELVELAEKYGALLYV-DEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG----GYIAGSAALIDYL- 261 (388)
T ss_pred HHHHHHHHHhCcEEEE-EccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC----ceeeCcHHHHHHH-
Confidence 9999999999999999 58899999886542 44 38999997 99973 34 6888888877665
Q ss_pred CceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001769 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1016)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~ 464 (1016)
|.++.+.|+|++..++++++...+..-.+-..+..+++..++.+++..++..
T Consensus 262 ----------------------------~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 262 ----------------------------RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred ----------------------------HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 3346677888777777766654322222223567788899999999777777
Q ss_pred CCeEEcC-CCCccEEEEecCC-HHHHHHHHHHcCceeecc-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 465 GTVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 465 G~~~l~~-~~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~-----~--~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
| +.+.. ...+-++.+..+. +.++...|.++||++..+ + ..++|+|++..||++||++++++|..
T Consensus 314 ~-~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 314 G-LVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred C-CccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 7 66543 2233346666555 889999999999987543 2 37899999999999999999999863
No 38
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=2.3e-22 Score=231.13 Aligned_cols=346 Identities=15% Similarity=0.174 Sum_probs=236.4
Q ss_pred CCCHHHHHHHHHHHhcCCCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCC
Q 001769 147 GLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1016)
Q Consensus 147 ~~sE~e~~~~l~~la~~n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~ 226 (1016)
+.+|.|++++|++++++|..+..|+|..+-+ .-|.++ +.+.+ +.... +..+....+..+.+.++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~a~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g~ 74 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYERILSSMCTE-PHPIAR-KAHEM---FLETN-LGDPGLFPGTAKLEEEAVEMLGELLHL 74 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHeeeeeecC-chHHHH-HHHHH---HHhcC-CCCcccCccHHHHHHHHHHHHHHHhCC
Confidence 3689999999999999998877788876522 344443 23321 11000 111112246777788999999999999
Q ss_pred CCccEEEccchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC
Q 001769 227 PMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 296 (1016)
Q Consensus 227 ~~anasl~~~~Taa~eA~~~a~~~~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~ 296 (1016)
+..++.++++||.++.+++.+.+.. .+++++|++++..|+++.+.++ ..|++++.++. ++|++ +++
T Consensus 75 ~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 150 (371)
T PRK13520 75 PDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD----MLGVELRRAPLDDDYRVDVKAVEDLIDD 150 (371)
T ss_pred CCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH----HcCceEEEecCCCCCcCCHHHHHHHHhh
Confidence 8777888899998877765544211 1247899999999999777653 35778777653 45666 777
Q ss_pred CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC---CC-----CCcccceEEEecCccccccCCCCC
Q 001769 297 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KP-----PGELGADIVVGSAQRFGVPMGYGG 367 (1016)
Q Consensus 297 ~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l---~~-----pg~~GaDivvgs~k~lg~P~g~GG 367 (1016)
++++|++.++ |.+|.+.|+++|.++||++|++++|+. .++.+.+ .. ...+|+|.+.+++++|+.+ |+
T Consensus 151 ~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a---~~ 226 (371)
T PRK13520 151 NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA-AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA---PI 226 (371)
T ss_pred CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe-cchhHHHHhhcCCCCccccCCCCceEEECCccccCc---cC
Confidence 7877776665 678999999999999999999999943 3332221 11 1246899999999777531 23
Q ss_pred cceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHH
Q 001769 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1016)
Q Consensus 368 P~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia 447 (1016)
|.+++++.++++.+.+... .+ |... .. + .-..||.+. ....++.++ +..++.+|++++.
T Consensus 227 ~~G~~~~~~~~~~~~l~~~----------~~-~~~~--~~-~--~~~~gt~~~---~~~~~~~~a--l~~l~~~g~~~~~ 285 (371)
T PRK13520 227 PAGGILFRDESYLDALAVD----------TP-YLTS--KK-Q--ATLTGTRSG---AGVAATYAV--MKYLGREGYRKVV 285 (371)
T ss_pred CceEEEEcCHHHHHhhccc----------Cc-cccC--CC-C--cceEeeccC---hHHHHHHHH--HhhhcHhHHHHHH
Confidence 4445555566676665310 00 1000 00 0 001244433 223333333 3667888999999
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeccc-CCeEEEEeccCCCHHHHHHHHHH
Q 001769 448 QRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIV 526 (1016)
Q Consensus 448 ~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~-~~~lris~te~~t~edid~ll~a 526 (1016)
+++.+++++|++.|+++| ++++..+..+.+.+..+.+.++.++|.++||.++... ++.+|+|++.++|++|+++++++
T Consensus 286 ~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~ 364 (371)
T PRK13520 286 ERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLED 364 (371)
T ss_pred HHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHH
Confidence 999999999999999987 8844334444566666667899999999999887653 56799999999999999999999
Q ss_pred Hh
Q 001769 527 FA 528 (1016)
Q Consensus 527 L~ 528 (1016)
|.
T Consensus 365 l~ 366 (371)
T PRK13520 365 LK 366 (371)
T ss_pred HH
Confidence 85
No 39
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=5.2e-22 Score=228.71 Aligned_cols=301 Identities=15% Similarity=0.174 Sum_probs=221.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001769 207 QGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1016)
++..+.+.++++.+++++|++.. ++.++.|+|.++..++.++ + +++++|+++...|+++...+...++..|++++.
T Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~--~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 40 LRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-L--KEGDHVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-c--CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 34557788899999999999754 7888899998877776664 2 378999999999999998887777777888887
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001769 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1016)
Q Consensus 286 vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvg 354 (1016)
++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|++++|| ..+++|.+. ...++|+|++++
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD-~a~~~g~~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD-AAQTAGVIPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE-hhhccCccCCCchhcCCCEEEe
Confidence 654 34555 7778999999987 67999999999999999999999994 455666543 335689999999
Q ss_pred cC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 355 s~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
++ |++++|. +.|+++++++. .+.....|+. +.+.+.+.. .+....|.+.+|.|+ ..+.++.+++
T Consensus 196 s~~K~l~~p~-----g~g~l~~~~~~--~~~~~~~~~~----~~~~~~~~~-~~~~~~r~~~~t~~~---~~~~a~~~al 260 (376)
T TIGR01977 196 TGHKGLLGPQ-----GTGGLYIREGI--KLKPLKSGGT----GSHSALIDQ-PSELPDRFESGTLNT---PGIAGLNAGI 260 (376)
T ss_pred cccccccCCC-----CceEEEEcCCc--CcCceecCCC----ccccccccc-cccchhhccCCCCCH---HHHHHHHHHH
Confidence 99 6565443 46778887764 1222222210 000011111 111223567788887 4455555554
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--C--CccEEEEecCC--HHHHHHHHHHc-Cceeec-----
Q 001769 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P--FFDTVKVKCAD--AHAIASAAYKI-EMNLRV----- 501 (1016)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~--~~~~v~i~~~~--~~~v~~~L~~~-GI~~~~----- 501 (1016)
.++...|++++.++++++++++++.|.++++++++.+ + ....+.|..++ ..++.+.|.++ ||.++.
T Consensus 261 --~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~ 338 (376)
T TIGR01977 261 --KFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCA 338 (376)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccc
Confidence 6777889999999999999999999998755888742 1 23346666665 78899999987 887643
Q ss_pred ---------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 502 ---------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 502 ---------~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
...+.+|++++.++|.+|+++++++|+
T Consensus 339 ~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~ 374 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALS 374 (376)
T ss_pred hHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHh
Confidence 134789999999999999999999985
No 40
>PRK02769 histidine decarboxylase; Provisional
Probab=99.91 E-value=3.2e-22 Score=230.47 Aligned_cols=238 Identities=18% Similarity=0.214 Sum_probs=176.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCCce---eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~~---~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~v 704 (1016)
....+++.++.+++++++|++.. .+++++|++++..++.+.|.+ .++++|++++.+|.++.+.+..+|+++
T Consensus 61 ~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~------~~~~~ii~s~~~H~Sv~ka~~~lg~~~ 134 (380)
T PRK02769 61 LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL------FPDGTLYYSKDTHYSVSKIARLLRIKS 134 (380)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh------CCCcEEEeCCCceehHHHHHHHcCCCC
Confidence 35788999999999999999742 244556666654444444432 235689999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcC---cEEEEEccccccccCcCC--
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG---GQVYMDGANMNAQVGLTS-- 778 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g---~lv~vDga~~~a~~~l~~-- 778 (1016)
+.|+++++|.+|+++|+++|++.+.+|++|+++.+| .+|.++ ||++|+++|+++| +++|||||+..+...+.+
T Consensus 135 ~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id-pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 135 RVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID-NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred ceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCCceEEEEEecccceeecccCcc
Confidence 999999999999999999998433359999999986 689999 9999999999998 699999987543332111
Q ss_pred -C--CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHH
Q 001769 779 -P--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1016)
Q Consensus 779 -p--g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~ 855 (1016)
+ ...|+|.+++|+||+++.|+ |+|++++++++.+.+.... . .+... .. .+.++. +...++.
T Consensus 214 ~~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~~-~---yl~~~--d~---t~~GSR--~g~~~l~ 277 (380)
T PRK02769 214 PPFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVDV-D---YIGSR--DQ---TISGSR--NGHTALL 277 (380)
T ss_pred ccCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccCc-c---ccCCC--CC---CccCCC--CcHHHHH
Confidence 1 12389999999999986553 5788999986654442111 0 00000 11 111111 1234567
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 856 a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.|+.|+.+|.+|++++.++++++|+|+.++|++
T Consensus 278 lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~ 310 (380)
T PRK02769 278 LWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA 310 (380)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999999999986
No 41
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=3.4e-22 Score=231.39 Aligned_cols=243 Identities=19% Similarity=0.230 Sum_probs=187.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHhCCCc-eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHh
Q 001769 625 DQAQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAM 699 (1016)
Q Consensus 625 e~~qG~~e~~~el~~~laeL~G~~~-~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~ 699 (1016)
..++-..+.+++.++.+++++|.+. .++..+.|++ ++..+.++.|.... .++|+||+++..|.+|... ++.
T Consensus 59 ~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT--~aln~va~~l~~~~--~~gdeIv~s~~EH~sn~~pw~~~~~~ 134 (405)
T COG0520 59 TLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTT--EALNLVARGLGRSL--KPGDEIVVSDLEHHSNIVPWQELAKR 134 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChh--HHHHHHHHHhhhhh--cCCCEEEEccCcchhhHHHHHHHHHh
Confidence 4466677889999999999999994 6666666654 25566666653211 3568999999999998755 446
Q ss_pred CCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCC
Q 001769 700 CGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS 778 (1016)
Q Consensus 700 ~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~ 778 (1016)
.|++|+++|++++|.+|+++++.+++ ++|++|.+++- |.+|.+. |+++|+++||++|++++||++|..++.. ..
T Consensus 135 ~Ga~v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~-pv~~I~~la~~~ga~v~VDaaq~~~h~~-id 209 (405)
T COG0520 135 TGAKVRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVN-PVKEIAELAHEHGALVLVDAAQAAGHLP-ID 209 (405)
T ss_pred cCcEEEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccc-hHHHHHHHHHHcCCEEEEECccccCccC-CC
Confidence 79999999999899999999999998 89999999984 6899998 8999999999999999999999766554 35
Q ss_pred CCccCCcEEEeCccccccCCCCCCCC-eEEEEEEcccccccCCCCccccCCC----------CC--CCCcCCCCCCccCC
Q 001769 779 PGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGG----------IP--APEKSQPLGTIAAA 845 (1016)
Q Consensus 779 pg~~GaDi~~~s~hK~~~~phg~GGP-g~G~i~~~~~l~~~lpg~~~g~~g~----------~~--~re~~~~~g~i~s~ 845 (1016)
..++|+|++++|+|||++ || |+|++++++++.+.+++...|+... ++ .+..+.+|.++..
T Consensus 210 v~~l~~Df~afsgHKwl~------gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~- 282 (405)
T COG0520 210 VQELGCDFLAFSGHKWLL------GPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAG- 282 (405)
T ss_pred chhcCCCEEEEccccccc------CCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHH-
Confidence 678999999999999984 45 8999999999888885554443200 00 0112344555542
Q ss_pred ccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhccC
Q 001769 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY 890 (1016)
Q Consensus 846 ~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~~ 890 (1016)
...+..|..|+..+| +..+.++...++.|+.++|++..
T Consensus 283 ----~i~l~aAl~~~~~ig---~~~i~~~e~~L~~~~~~~L~~~~ 320 (405)
T COG0520 283 ----AIGLAAALDYLLEIG---MEAIEAHERELTEYLLEGLSELP 320 (405)
T ss_pred ----HHhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHhcCC
Confidence 234455666666665 77788899999999999999853
No 42
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.91 E-value=1.8e-22 Score=236.33 Aligned_cols=315 Identities=19% Similarity=0.209 Sum_probs=226.9
Q ss_pred ccCCCHHHHHHHHHHHhccccCCCcc-c--cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHH
Q 001769 565 NKYHTEHELLRYIHLLQSKELSLCHS-M--IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1016)
Q Consensus 565 ~~~~sE~e~~r~l~~l~~~n~~~~~~-~--i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~l 641 (1016)
..+..+++++.++..+..+|..+..+ . ...++|.+...+...... ..+.+-+...+ +.+++..++..++..|+
T Consensus 35 ~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~---~~~~~~nl~d~-~~~p~a~~~E~~~v~~l 110 (460)
T COG0076 35 EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL---VSALNKNLGDP-DESPAAAELEERVVNML 110 (460)
T ss_pred ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH---HHHHhhcCCCc-ccChhHHHHHHHHHHHH
Confidence 46789999999999998888655432 1 234555544444333322 12333345555 77889999999999999
Q ss_pred HHHhCCCc-e-eeecCChHHHHHHHHHHHHHHHHh-c---C--CCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-C
Q 001769 642 CTITGFDS-F-SLQPNAGAAGEYAGLMVIRAYHKA-R---G--DHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (1016)
Q Consensus 642 aeL~G~~~-~-~l~~~sGa~ae~a~l~air~~~~~-~---g--~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~ 712 (1016)
++|+|++. . ..++++|+++++-+++++|..... . + ....++||+|..+|.++.+++.++|++++.++.++ +
T Consensus 111 ~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~ 190 (460)
T COG0076 111 SDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD 190 (460)
T ss_pred HHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence 99999963 3 366777888888778888765431 1 1 01234899999999999999999999999999988 7
Q ss_pred CCCCHHHHHHHHHcCCCCEEE--EEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC-C-----ccC
Q 001769 713 GNINIEELRKAAEANRDNLST--LMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-G-----YIG 783 (1016)
Q Consensus 713 g~iD~~~L~~~i~~~~~~t~~--v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p-g-----~~G 783 (1016)
.++|+++|+++|+ ++|.. |+.+.++ .+|.+| ||++|+++|+++|+++|||+|.--.+..+..+ + -.+
T Consensus 191 ~~id~~~l~~~i~---~~t~~g~vV~~aGtT~~G~iD-di~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~ 266 (460)
T COG0076 191 YRIDVDALEEAID---ENTIGGVVVGTAGTTDTGSID-DIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEG 266 (460)
T ss_pred cccCHHHHHHHHH---hhccCceEEEEecCCCCCccC-CHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCC
Confidence 9999999999999 67776 8888886 589999 99999999999999999998742222222222 2 237
Q ss_pred CcEEEeCccccccCCCCCCCCeEEEEEEccc--ccc-------cCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHH
Q 001769 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP-------FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1016)
Q Consensus 784 aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~--l~~-------~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~ 854 (1016)
+|.++.|+||++..|. ++|++.+|++ +.+ ++|+.. ...-.+.++.- +..++
T Consensus 267 vdSIt~d~HK~g~aP~-----~~G~il~rd~e~l~~~~~~~~~yl~~~~-------------~~~~ti~~sr~--~~~~~ 326 (460)
T COG0076 267 VDSITVDGHKYGLAPI-----GCGVVLFRDEEALRRILIFADYYLPGGG-------------IPNFTILGSRP--GRQAL 326 (460)
T ss_pred ceEEEECcccccCCCC-----CceEEEEECHHHhhhhhhcccccCCCCC-------------cCceeEeeccc--hHHHH
Confidence 8999999999987774 5678888864 332 222210 00001111121 23667
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeEEEEEecC
Q 001769 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
+.|+-|+.+|.+|++++.++++++|+|++++|++ .+++.-+ +...-++++.++
T Consensus 327 ~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~----p~l~~V~fr~~~ 381 (460)
T COG0076 327 ALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNE----PELPIVAFRLKD 381 (460)
T ss_pred HHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecC----CccceEEEEcCC
Confidence 8899999999999999999999999999999998 3888853 244446666643
No 43
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=1.7e-23 Score=241.07 Aligned_cols=264 Identities=16% Similarity=0.144 Sum_probs=202.6
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
..+++.|++|.|.+.+ +.+.||.+|..++++++. +++++||++...|+..... +..+|+++.+++.
T Consensus 65 ~~le~~la~LEg~~~a-~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~- 134 (395)
T PRK08114 65 FSLQEAMCELEGGAGC-ALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP- 134 (395)
T ss_pred HHHHHHHHHHhCCCeE-EEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence 4688999999998765 445667766654444431 3578999998888654433 3568999999885
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcC--cEEEEEccccccccCcCCCCccCCcEE
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSPGYIGADVC 787 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g--~lv~vDga~~~a~~~l~~pg~~GaDi~ 787 (1016)
.|.++++++|+ ++|++|++++|+ .+|.+. ||++|+++||++| ++++||+++ +.+.+++|.++|+|++
T Consensus 135 ----~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~-DI~~Ia~ia~~~g~g~~lvVDnT~--a~p~~~~pl~~GaDiv 204 (395)
T PRK08114 135 ----LIGADIAKLIQ---PNTKVVFLESPGSITMEVH-DVPAIVAAVRSVNPDAVIMIDNTW--AAGVLFKALDFGIDIS 204 (395)
T ss_pred ----CCHHHHHHhcC---CCceEEEEECCCCCCCEee-cHHHHHHHHHHhCCCCEEEEECCC--ccccccCHHHcCCcEE
Confidence 58899999998 899999999985 678887 9999999999985 999999654 5566789999999999
Q ss_pred EeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
++|+|||++.+ |+-++|+++.++++...+- .....+|.+.+ |+ -+||...|.++
T Consensus 205 v~S~tKyl~Gh---sdv~~G~v~~~~~~~~~l~-------------~~~~~~G~~~~-p~---------~a~l~~rgl~T 258 (395)
T PRK08114 205 IQAGTKYLVGH---SDAMIGTAVANARCWEQLR-------------ENSYLMGQMVD-AD---------TAYMTSRGLRT 258 (395)
T ss_pred EEcCcccccCC---CcceeEEEEcCHHHHHHHH-------------HHHHhccCCCC-HH---------HHHHHHcCCCc
Confidence 99999999622 4457888877765433221 00122344443 33 57788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecC--chhHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRG--LKEELDRYCDALISIREEI 930 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~--~~~~ld~f~~~l~~i~~e~ 930 (1016)
|..+++++.+||..++++|+++ -+|.|||+++++.|+. .|++++ ..+++.+|+++|+.| ..+
T Consensus 259 L~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~-~~a 337 (395)
T PRK08114 259 LGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLF-SMA 337 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcc-eee
Confidence 9999999999999999999986 5799999999998883 344554 367899999999987 456
Q ss_pred HHHhcCCCCCCCCccccCCCC
Q 001769 931 AQIENGKADIHNNVLKGAPHP 951 (1016)
Q Consensus 931 ~~~~~g~~~~~~~~l~~ap~~ 951 (1016)
.++ | +.++|..+||.
T Consensus 338 ~Sl--G----g~~SLi~~~~~ 352 (395)
T PRK08114 338 YSW--G----GFESLILANQP 352 (395)
T ss_pred ccc--C----CccceeccCCc
Confidence 665 6 78999997754
No 44
>PLN02263 serine decarboxylase
Probab=99.91 E-value=4.3e-22 Score=231.39 Aligned_cols=237 Identities=18% Similarity=0.225 Sum_probs=177.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCce---eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEE
Q 001769 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~---~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv 705 (1016)
+..+++.++.+|+++++|++.. ..++++|++|++.++++.|.+. ++..+++|+.+|.+..+.+.++|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------CCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 6889999999999999999742 3566778888877777777531 234789999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCc-----EEEEEccccccccCcC--
Q 001769 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGG-----QVYMDGANMNAQVGLT-- 777 (1016)
Q Consensus 706 ~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~-----lv~vDga~~~a~~~l~-- 777 (1016)
.||+|++|++|+++|+++|.+...++.+|+.+.++ .+|.+| ||++|+++|+++|+ ++|||||-.-....+.
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD-pi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~ 282 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD-DLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR 282 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC-CHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence 99999999999999999998433346777788876 589999 99999999999997 9999987421111111
Q ss_pred CC---CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHH
Q 001769 778 SP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1016)
Q Consensus 778 ~p---g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~ 854 (1016)
.| +..++|.++.|+|||++.|++ .|++.+|++....+.... .|... ....+. .+..+ ..++
T Consensus 283 ~~~~df~~~vDSIsvD~HK~l~~P~~-----cgvll~R~~~~~~~~~~~-----~Yl~~-~d~ti~--gSR~g---~~al 346 (470)
T PLN02263 283 APKVTFKKPIGSVSVSGHKFVGCPMP-----CGVQITRMEHINVLSSNV-----EYLAS-RDATIM--GSRNG---HAPI 346 (470)
T ss_pred ccccCCCcCccEEEECCccccCCCcC-----EEEEEEehhhHhhhccCh-----HhhCC-CCCCcC--CCCCc---HHHH
Confidence 11 223499999999999988763 568888865433221100 01000 011111 11111 2457
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
..|+.|+.+|.+|+++..++++++|+|+.++|++
T Consensus 347 ~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~ 380 (470)
T PLN02263 347 FLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRE 380 (470)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999986
No 45
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.91 E-value=9.9e-22 Score=229.46 Aligned_cols=321 Identities=14% Similarity=0.091 Sum_probs=215.9
Q ss_pred CCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHH
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 639 (1016)
Q Consensus 560 ~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~ 639 (1016)
++| +++++.+|+++.+...--.|... ...++|+||++..+....... .+.+-++..| ..+....+++.++++
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~---~~l~~~~~np-~s~~~~~~le~~~~~ 87 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMD---ETINKNMIDK-DEYPQTAEIENRCVN 87 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHH---HHHhcCCCCc-ccCccHHHHHHHHHH
Confidence 556 47889999999998755444432 345678887776554322211 1121122233 224455699999999
Q ss_pred HHHHHhCCC-c---eeee-cCChHHHHHHHHHHHHHHHHh----cCC-CCCCEEEEcCCCccccHHHHHhCCcEEEEEcC
Q 001769 640 WLCTITGFD-S---FSLQ-PNAGAAGEYAGLMVIRAYHKA----RGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (1016)
Q Consensus 640 ~laeL~G~~-~---~~l~-~~sGa~ae~a~l~air~~~~~----~g~-~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~ 709 (1016)
|+++++|++ . ..+. +++|++++..++.++|..... .|. ..+.+|++++.+|.+..+.+..+|++++.||+
T Consensus 88 ~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~ 167 (431)
T TIGR01788 88 MLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM 167 (431)
T ss_pred HHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec
Confidence 999999998 2 2232 455666665555554422111 111 12357999999999999999999999999999
Q ss_pred CCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHc------CcEEEEEccccccccCc---C-
Q 001769 710 DAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGL---T- 777 (1016)
Q Consensus 710 d~~-g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~------g~lv~vDga~~~a~~~l---~- 777 (1016)
|++ |.+|+++|+++|+ ++|.+|+++..| .+|.++ ||++|+++|+++ |+++|||+|+......+ .
T Consensus 168 d~~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~id-pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~ 243 (431)
T TIGR01788 168 DPGRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYE-DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL 243 (431)
T ss_pred CCCceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccC-CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc
Confidence 986 5999999999998 789999999876 699999 999999999999 99999999985222111 0
Q ss_pred --CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEccc--ccccCCC--CccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 778 --SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPS--HPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 778 --~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~--l~~~lpg--~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
.....++|.+++|+||++. |..|+|+++++++ +.+.+-. ...+.. ... .+.-.+.+ +.
T Consensus 244 ~~~~~~~~~DSis~s~HK~~~-----~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~------~~~--~t~~~sR~---g~ 307 (431)
T TIGR01788 244 EWDFRLPRVKSINVSGHKYGL-----VYPGVGWVIWRDEEALPEELIFHVNYLGGD------EPT--FTLNFSRP---AN 307 (431)
T ss_pred hhhcCCCCceEEEECchhccC-----CCCCcEEEEEeChHHcchhheecccccCCC------CCC--cceecCch---HH
Confidence 1124578999999999864 3457889999864 3232210 011100 000 00001111 12
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeEEEEEecC
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
.++..|+.|+.+|.+|++++.++++++|+|+.++|++ .++++-++ +..+-+.|++++
T Consensus 308 ~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~---~~~~iV~Fr~~~ 366 (431)
T TIGR01788 308 QVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG---SGIPLVAFKLKD 366 (431)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC---CCceEEEEEeCC
Confidence 3456799999999999999999999999999999987 47776432 234555566654
No 46
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.7e-22 Score=220.20 Aligned_cols=277 Identities=20% Similarity=0.212 Sum_probs=201.9
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc-ccH---HHHHhCCcEEEEEcCCC
Q 001769 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGTDA 711 (1016)
Q Consensus 636 el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg-~~~---~~a~~~G~~vv~v~~d~ 711 (1016)
.+++.++.|-|--.. +...||-++. .+++.... ..+|+|+.+..-+| ++. .....+|++|++|+.
T Consensus 66 vlE~RiAaLEGG~aa-~a~aSG~AA~---~~ai~~la-----~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-- 134 (426)
T COG2873 66 VLEERIAALEGGVAA-LAVASGQAAI---TYAILNLA-----GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-- 134 (426)
T ss_pred HHHHHHHHhhcchhh-hhhccchHHH---HHHHHHhc-----cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC--
Confidence 677889988875543 4455664443 33433321 25789998877665 433 235789999999987
Q ss_pred CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeC
Q 001769 712 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLN 790 (1016)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s 790 (1016)
.|++.++++|+ +||++|++++- |.-+.+. ||++|+++||++|++++|| |+++.+.+++|.+.|+|||++|
T Consensus 135 ---~d~~~~~~aI~---~nTkavf~EtigNP~~~v~-Die~ia~iAh~~gvpliVD--NT~atpyl~rP~~hGADIVvHS 205 (426)
T COG2873 135 ---DDPENFEAAID---ENTKAVFAETIGNPGLDVL-DIEAIAEIAHRHGVPLIVD--NTFATPYLCRPIEHGADIVVHS 205 (426)
T ss_pred ---CCHHHHHHHhC---cccceEEEEeccCCCcccc-CHHHHHHHHHHcCCcEEEe--cCCCcceecchhhcCCCEEEEe
Confidence 48999999999 99999999985 5556665 9999999999999999999 8889999999999999999999
Q ss_pred ccccccCCCCCCCCeEEEEEEc-cc--cc--ccCCCCcccc---CCC-C-C-----------CCCcCCCCCCccCCccch
Q 001769 791 LHKTFCIPHGGGGPGMGPIGVK-KH--LA--PFLPSHPVVS---TGG-I-P-----------APEKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 791 ~hK~~~~phg~GGPg~G~i~~~-~~--l~--~~lpg~~~g~---~g~-~-~-----------~re~~~~~g~i~s~~~G~ 849 (1016)
++||++ |.|-.+|-+++. .. +. ...|...... .|- + . +...-+.+|...+ ||
T Consensus 206 ~TK~ig----GhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~ls-Pf-- 278 (426)
T COG2873 206 ATKYIG----GHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLS-PF-- 278 (426)
T ss_pred eccccc----CCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccC-cH--
Confidence 999995 334444444443 21 11 1222111000 010 0 0 0001123444443 44
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-----------E--EEecCch
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-----------I--VDLRGLK 913 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-----------i--~~~~~~~ 913 (1016)
.+|+...|.|+|..+++++++||..+++.|++| -.|.|||+++++.|+. | +.+++..
T Consensus 279 -------nAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ 351 (426)
T COG2873 279 -------NAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGY 351 (426)
T ss_pred -------HHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChH
Confidence 577889999999999999999999999999986 5788999999999984 3 3445666
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 914 EELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 914 ~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+..++|+++|+.+...+.= | |..+|.-+|.++.
T Consensus 352 ea~~~fi~~l~L~s~laNv---G----D~rsLvIHPAsTT 384 (426)
T COG2873 352 EAGKKFIDALKLFSHLANI---G----DARSLVIHPASTT 384 (426)
T ss_pred HHHHHHHHHHHHHHhhccc---c----ccceeEecCcccc
Confidence 7889999999999777664 6 8899999999884
No 47
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=4.9e-23 Score=237.80 Aligned_cols=265 Identities=16% Similarity=0.102 Sum_probs=199.8
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
.++++.++++.|...+ +.+.||.+|..++++++. +++|+||+++..|+..... ...+|++++.++.
T Consensus 64 ~~Le~~iA~le~~~~~-~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~- 133 (394)
T PRK09028 64 FAFQAAIVELEGGAGT-ALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDP- 133 (394)
T ss_pred HHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECC-
Confidence 3678899999887654 556677766655554442 3578999998877544332 3457999988765
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|.++++++++ ++|++|++++|+ .+|.+. ||++|+++||++|++++||.++ +.+..++|.++|+|++++
T Consensus 134 ----~~~e~l~~~l~---~~TklV~lespsNPtg~v~-dl~~I~~la~~~g~~lvvD~t~--a~p~~~~Pl~~GaDivv~ 203 (394)
T PRK09028 134 ----MIGEGIRELIR---PNTKVLFLESPGSITMEVQ-DVPTLSRIAHEHDIVVMLDNTW--ASPINSRPFEMGVDISIQ 203 (394)
T ss_pred ----CCHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCc--cccccCCccccCceEEEE
Confidence 26788999997 899999999995 577776 9999999999999999999655 455568899999999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~ 869 (1016)
|+|||++.+ |+--+|+++.++++.+.+-. ....+|.+.+ |+ -+|+...|.++|.
T Consensus 204 S~tK~l~Gh---~d~~~G~~~~~~~~~~~l~~-------------~~~~~G~~~~-p~---------~a~l~~rgl~TL~ 257 (394)
T PRK09028 204 AATKYIVGH---SDVMLGTATANEKHWDQLRE-------------HSYLMGQCTS-PD---------DVYLAMRGLRTLG 257 (394)
T ss_pred eCCeEecCC---CCEEEEEEECCHHHHHHHHH-------------HHHhcCCCCC-HH---------HHHHHHcccCcHH
Confidence 999999622 34456766655544332210 0112344433 33 5778899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEec-CchhHHHHHHHHHHHHHHHHHHH
Q 001769 870 EASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLR-GLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 870 ~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~-~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
.+++++.+||..++++|+++ .+|.|||+++++.|++ .|.++ +..++.++|+++|+.| ..+.++
T Consensus 258 lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~-~~~~sl 336 (394)
T PRK09028 258 VRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHF-KMGFSW 336 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcc-eEeccc
Confidence 99999999999999999985 5899999999999984 34454 3456889999999977 456666
Q ss_pred hcCCCCCCCCccccCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~ 952 (1016)
| +.++|..+|.++
T Consensus 337 --G----~~~sLv~~p~~~ 349 (394)
T PRK09028 337 --G----GFESLILGVFGI 349 (394)
T ss_pred --C----CCcceeECCCCc
Confidence 6 789999999776
No 48
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.90 E-value=4.1e-22 Score=229.25 Aligned_cols=332 Identities=18% Similarity=0.212 Sum_probs=213.3
Q ss_pred CCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHH
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 639 (1016)
Q Consensus 560 ~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~ 639 (1016)
.+| .++.+.++++..+++.-.......++..++|.-+...++.. ..........+-+.+.. +.++...++..++.+
T Consensus 11 ~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~-i~~~~l~~~~n~n~~~~-~~~P~~~~~E~~vi~ 86 (373)
T PF00282_consen 11 ELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPAS-ILADLLASALNQNGFTW-EASPAATEIEREVIR 86 (373)
T ss_dssp CHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHH-HHHHHHHHHHT-BTTST-TTSHHHHHHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHH-HHHHHHHhhhccccccc-ccccccccchHHHHH
Confidence 556 36678999999998766655433334455664221222211 10000112233233333 668889999999999
Q ss_pred HHHHHhCCCc--------eeeecCChHHHHHHHHHHHHHHHH----hcCC--CCCCEEEEcCCCccccHHHHHhCCcEEE
Q 001769 640 WLCTITGFDS--------FSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 640 ~laeL~G~~~--------~~l~~~sGa~ae~a~l~air~~~~----~~g~--~~~~~Vlv~~saHg~~~~~a~~~G~~vv 705 (1016)
|+++++|++. ..+++++|+++++.+++++|.... ..|. .++..|++++.+|.+..+.+.++|+.++
T Consensus 87 ~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 87 WLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVR 166 (373)
T ss_dssp HHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEE
T ss_pred HHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEE
Confidence 9999999992 346778888899888888886532 1231 1345788899999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCC---EEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEcccccccc--CcCC-
Q 001769 706 SVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--GLTS- 778 (1016)
Q Consensus 706 ~v~~d~~g~iD~~~L~~~i~~~~~~---t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~--~l~~- 778 (1016)
.||+|++|++|+++|+++|.+...+ +.+|+.+.++ .+|.+| ||++|+++|+++++++|||||...+.. ...+
T Consensus 167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D-~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~ 245 (373)
T PF00282_consen 167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID-PLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH 245 (373)
T ss_dssp EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG
T ss_pred EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCccccccc-CHHHHhhhccccceeeeecccccccccccccccc
Confidence 9999999999999999998643222 4467777776 589999 999999999999999999987532111 1111
Q ss_pred --CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccc--cccC---CCCccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 779 --PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--APFL---PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 779 --pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l--~~~l---pg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
.+-.++|.++.++||++++|++ .|++.+|++. .... +..+..... ........+. .+-..+-..
T Consensus 246 ~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~~~~---~~~~~~~~~~-~tl~~SR~~ 316 (373)
T PF00282_consen 246 LLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGNDDR---ESDESYDYGD-YTLQGSRRF 316 (373)
T ss_dssp GGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S-S---SS-GGGCEEE-GSSSSSGHH
T ss_pred cccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhccccc---cccccccccc-ccccccccc
Confidence 1345689999999999988864 4688888642 2211 111110000 0000000000 000111346
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeEEEEEe
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDL 909 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~i~~~ 909 (1016)
.++..|+.|+.+|.+|++++.++++++|+|++++|++ .+++.- .+...-++|++
T Consensus 317 ~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~----~~~~~~vcFr~ 372 (373)
T PF00282_consen 317 RALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN----EPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS----TTSSSEEEEEE
T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc----CCCceEEEEEe
Confidence 6788999999999999999999999999999999998 366653 23333455554
No 49
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.90 E-value=1.1e-21 Score=220.13 Aligned_cols=275 Identities=17% Similarity=0.223 Sum_probs=190.5
Q ss_pred cccccc-ccCCCChhhh--hcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHH
Q 001769 591 MIPLGS-CTMKLNATTE--MMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMV 667 (1016)
Q Consensus 591 ~i~LGs-~t~~~~~~~~--~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~a 667 (1016)
||+|.+ .|+++.+... +.+.....|.| |...-..-.-.++++++.++.+++++|.+...++++||+ +|+.+++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgN--PsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~--TEsnNla 77 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGN--PSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGA--TESNNLA 77 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCC--ccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCC--cHHHHHH
Confidence 678885 5666666533 33322223443 322101112367889999999999999998777777774 4577777
Q ss_pred HHH--HHHhcCCCCCCEEEEcCCCccccHHHHHh---CCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-C
Q 001769 668 IRA--YHKARGDHHRNVCIIPVSAHGTNPATAAM---CGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-T 741 (1016)
Q Consensus 668 ir~--~~~~~g~~~~~~Vlv~~saHg~~~~~a~~---~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~ 741 (1016)
++. +.... ..++.+||++..+|.+.-..++. .|++|.++|+|.+|.+|+++|+++|+ ++|.+|.|.+.| .
T Consensus 78 I~g~~~a~~~-~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~---~~T~LVSim~aNnE 153 (386)
T COG1104 78 IKGAALAYRN-AQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR---PDTILVSIMHANNE 153 (386)
T ss_pred HHhhHHhhhc-ccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC---CCceEEEEEecccC
Confidence 776 22211 13577999999999876655543 59999999999999999999999998 899999999875 7
Q ss_pred CccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEccc--ccccC
Q 001769 742 HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL 819 (1016)
Q Consensus 742 ~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~--l~~~l 819 (1016)
+|+++ ||++|+++|+++|+++|+|++|.++...+ .+.++++|++.+|+||.. |..|+|++++++. +.+.+
T Consensus 154 ~G~IQ-pI~ei~~i~k~~~i~fHvDAvQa~Gkipi-~~~~~~vD~ls~SaHK~~------GpkGiGaLyv~~~~~~~p~i 225 (386)
T COG1104 154 TGTIQ-PIAEIGEICKERGILFHVDAVQAVGKIPI-DLEELGVDLLSFSAHKFG------GPKGIGALYVRPGVRLEPLI 225 (386)
T ss_pred eeecc-cHHHHHHHHHHcCCeEEEehhhhcCceec-cccccCcceEEeehhhcc------CCCceEEEEECCCCccCcee
Confidence 99999 89999999999999999999997665543 567789999999999974 4448999999764 23333
Q ss_pred CCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc-CCccccCC
Q 001769 820 PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGV 897 (1016)
Q Consensus 820 pg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~-~~v~y~g~ 897 (1016)
.| |. |.+.+..+|-|+.+ ..+.+.-..+..+.+.....+....-+++.++|++. ..+...|.
T Consensus 226 ~G---Gg----QE~g~RsGTenv~~---------Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~ 288 (386)
T COG1104 226 HG---GG----QERGLRSGTENVPG---------IVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGD 288 (386)
T ss_pred cc---Cc----CCCCCCCCCccHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC
Confidence 22 11 21222233444432 112222233334556677777778888888888863 44554443
No 50
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.89 E-value=1.8e-21 Score=223.76 Aligned_cols=297 Identities=18% Similarity=0.216 Sum_probs=201.5
Q ss_pred CCCHHHHHHHHHHHhccccCCCcccccccc-ccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHh
Q 001769 567 YHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1016)
Q Consensus 567 ~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs-~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~ 645 (1016)
+++|+||+++|++++++|+++.+ | ||+ +|+..+...+... ++..-++..+ ...++..+++.++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 72 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYER--I-LSSMCTEPHPIARKAHE----MFLETNLGDP-GLFPGTAKLEEEAVEMLGELL 72 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHH--e-eeeeecCchHHHHHHHH----HHHhcCCCCc-ccCccHHHHHHHHHHHHHHHh
Confidence 37999999999999999998874 4 997 6655544333322 1111111122 223567788899999999999
Q ss_pred CCCce-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHH
Q 001769 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 724 (1016)
Q Consensus 646 G~~~~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i 724 (1016)
|++.. .++.++|+++++.++.+++.. +.+++++|++++..|.++...++..|++++.++.+++|.+|+++|+++|
T Consensus 73 g~~~~~~~~~~ggt~a~~~a~~~~~~~----~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 148 (371)
T PRK13520 73 HLPDAYGYITSGGTEANIQAVRAARNL----AKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLI 148 (371)
T ss_pred CCCCCCeEEecCcHHHHHHHHHHHHhh----ccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHH
Confidence 99753 355666666554444443321 1124578999999998887778889999999999888999999999999
Q ss_pred HcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCC------CCccCCcEEEeCccccccC
Q 001769 725 EANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCI 797 (1016)
Q Consensus 725 ~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~------pg~~GaDi~~~s~hK~~~~ 797 (1016)
+ +++++|++.++ |.+|.+. |+++|+++||++|++++||+++......+.. -...++|.+.++.||+...
T Consensus 149 ~---~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a 224 (371)
T PRK13520 149 D---DNTIGIVGIAGTTELGQVD-PIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA 224 (371)
T ss_pred h---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc
Confidence 8 67877777776 4689998 8999999999999999999987532211111 1235789999999997532
Q ss_pred CCCCCCCeEEEEEE-cccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHH
Q 001769 798 PHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1016)
Q Consensus 798 phg~GGPg~G~i~~-~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~ 876 (1016)
| .++|++++ ++++...+....-...+. .....+. ++.+ ..++.+++.|..++.+|++++.++..
T Consensus 225 ~-----~~~G~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~g---t~~~--~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 225 P-----IPAGGILFRDESYLDALAVDTPYLTSK-----KQATLTG---TRSG--AGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred c-----CCceEEEEcCHHHHHhhcccCccccCC-----CCcceEe---eccC--hHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 2 23444554 444544432100000000 0000011 1111 23556788899999999999999999
Q ss_pred HHHHHHHHHHhc-cCCccc
Q 001769 877 LNANYMAKRLEK-HYPILF 894 (1016)
Q Consensus 877 ~nA~yla~~L~~-~~~v~y 894 (1016)
++++++.++|++ ++++.+
T Consensus 290 ~~~~~l~~~L~~~g~~~~~ 308 (371)
T PRK13520 290 ENTRWLAEELKERGFEPVI 308 (371)
T ss_pred HHHHHHHHHHHhCCCEEec
Confidence 999999999987 455433
No 51
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.89 E-value=1.2e-22 Score=231.04 Aligned_cols=267 Identities=20% Similarity=0.244 Sum_probs=204.2
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~d 710 (1016)
..+++.+++|-|.+.+ +.+.||-++..++++++. +.+|+||++++.+|.-.. ..+.+|++++.++.
T Consensus 66 ~~lE~~~a~LEg~~~~-~afsSGmaAI~~~~l~ll--------~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~- 135 (396)
T COG0626 66 DALEEALAELEGGEDA-FAFSSGMAAISTALLALL--------KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP- 135 (396)
T ss_pred HHHHHHHHHhhCCCcE-EEecCcHHHHHHHHHHhc--------CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC-
Confidence 4788999999988865 456677655544344332 357899999987764333 24578999998876
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC-CccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~-~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|.+++++++.+ ++|++|++++|++ +.-+ .||++|+++||++|++++|| |+++.+.+++|.++|+||+++
T Consensus 136 ----~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v-~DI~~i~~~A~~~g~~vvVD--NTfatP~~q~PL~~GaDIVvh 206 (396)
T COG0626 136 ----GDDEALEAAIKE--PNTKLVFLETPSNPLLEV-PDIPAIARLAKAYGALVVVD--NTFATPVLQRPLELGADIVVH 206 (396)
T ss_pred ----CChHHHHHHhcc--cCceEEEEeCCCCccccc-ccHHHHHHHHHhcCCEEEEE--CCcccccccChhhcCCCEEEE
Confidence 466677777761 5999999999965 4444 49999999999999999999 889999999999999999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
|++|+++ +| +.--+|.+++++ ++.+++-. . ....+|.+.+ |+ -+||...|.++|
T Consensus 207 SaTKyl~-GH--sDvl~G~v~~~~~~~~~~~~~---~---------~~~~~G~~l~-p~---------dA~l~lRGlkTL 261 (396)
T COG0626 207 SATKYLG-GH--SDVLGGVVLTPNEELYELLFF---A---------QRANTGAVLS-PF---------DAWLLLRGLRTL 261 (396)
T ss_pred ecccccc-CC--cceeeeEEecChHHHHHHHHH---H---------HHhhcCCCCC-HH---------HHHHHHhccchH
Confidence 9999996 22 344567666554 44443300 0 0113566654 44 578899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE----------EE--EecCchhHHHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF----------IV--DLRGLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~----------i~--~~~~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
..+++++.+||..++++|+++ -+|+|||+++++.||+ ++ .+++. +++.+|+++|+.| ..+.++
T Consensus 262 ~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L~l~-~~a~Sl 339 (396)
T COG0626 262 ALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSLKLF-KLAESL 339 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhCCcc-EEeccC
Confidence 999999999999999999985 5899999999999994 33 44444 7899999999988 556675
Q ss_pred hcCCCCCCCCccccCCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~~ 953 (1016)
| ..|+|+..|.+|.
T Consensus 340 --G----gveSLi~~pa~~t 353 (396)
T COG0626 340 --G----GVESLISHPATMT 353 (396)
T ss_pred --C----CcccccccccccC
Confidence 6 7899999998884
No 52
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.89 E-value=3.2e-21 Score=242.05 Aligned_cols=308 Identities=14% Similarity=0.116 Sum_probs=218.1
Q ss_pred HhhhHHHHHHHHHHHHHHHcCCCCcc--EEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001769 205 IAQGRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1016)
Q Consensus 205 ~sqG~le~i~e~q~~iA~L~G~~~an--asl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~ 282 (1016)
.++-..+.+.+.++.+|+++|++..+ +.++.++|+++..+..++.+. ++++||++..+|++++. |+.+++..|++
T Consensus 72 ~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~--~gd~Iv~t~~eH~svl~-~~~~a~~~G~~ 148 (805)
T PLN02724 72 SSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWS--SESHFCYTLENHNSVLG-IREYALEKGAA 148 (805)
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCC--CCCeEEEeeccccchHH-HHHHHHHcCCe
Confidence 45566778999999999999997654 678889998877766666543 78999999999999885 55666778999
Q ss_pred EEEeCch------------------hhhc-c----------CCCEeEEEEEc-CCCCeeeccHHHHHHHHHhC-------
Q 001769 283 VVVSDLK------------------DIDY-K----------SGDVCGVLVQY-PGTEGEVLDYGDFIKNAHAN------- 325 (1016)
Q Consensus 283 v~~vd~~------------------~L~~-l----------~~~t~~V~v~~-pn~~G~i~dl~eI~~lah~~------- 325 (1016)
+++++++ +|+. + ++.|++|++++ +|.+|.+.|+++|..+++..
T Consensus 149 v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~ 228 (805)
T PLN02724 149 AIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKS 228 (805)
T ss_pred EEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccC
Confidence 9887653 1221 1 13567888886 68999999999775544432
Q ss_pred C-cEEEEE-eccccccCCC-CCCcccceEEEecCccccccCCCCCc-ceEEEEeehhhhhcCCCceEee-eecCC-CCcc
Q 001769 326 G-VKVVMA-TDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGP-HAAFLATSQEYKRMMPGRIVGV-SIDSS-GKPA 399 (1016)
Q Consensus 326 G-alviV~-a~~~alg~l~-~pg~~GaDivvgs~k~lg~P~g~GGP-~~Gfl~~~~~l~~~lpgrivG~-s~d~~-g~~~ 399 (1016)
| ++++|+ ++ ++|.+. +..++|+|++++|++|| +||| |.|+|++++++.+.|.+.+.|+ +.+.. ....
T Consensus 229 g~~~v~vDaaQ--~~g~~piDv~~~~~Dfl~~S~HK~-----~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~ 301 (805)
T PLN02724 229 GRWMVLLDAAK--GCGTSPPDLSRYPADFVVVSFYKI-----FGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADID 301 (805)
T ss_pred cceEEEeehhh--hcCCCCCChhhcCCCEEEEeccee-----ccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccc
Confidence 3 567773 34 344332 45689999999999554 2344 4789999999888888777774 22100 0001
Q ss_pred eeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC------CeEEcCCC
Q 001769 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG------TVEVQGLP 473 (1016)
Q Consensus 400 ~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G------~~~l~~~~ 473 (1016)
|.. ...+.+.|+|.||.|+ .++.++.+++ .++...|+++|.+++..+++||.+.|+++. ++++++..
T Consensus 302 ~~~--~~~~~~~rfE~GT~n~---~~i~~l~aal--~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~ 374 (805)
T PLN02724 302 FVK--RRERVEQRFEDGTISF---LSIAALRHGF--KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNH 374 (805)
T ss_pred eee--ccccHHHHhcCCCcch---hHHHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCC
Confidence 111 1112356789999999 5566666666 556566899999999999999999999873 37777532
Q ss_pred --------CccEEEEecCC-------HHHHHHHHHHcCceeec------------c------------------------
Q 001769 474 --------FFDTVKVKCAD-------AHAIASAAYKIEMNLRV------------V------------------------ 502 (1016)
Q Consensus 474 --------~~~~v~i~~~~-------~~~v~~~L~~~GI~~~~------------~------------------------ 502 (1016)
...+|+|++.+ ..++.+.+.++||.++. +
T Consensus 375 ~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~ 454 (805)
T PLN02724 375 TFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVI 454 (805)
T ss_pred CCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhhee
Confidence 23466666542 34566555678997631 0
Q ss_pred ---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 503 ---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 ---~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+.||+|++.+||.+||++|+++|..
T Consensus 455 ~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 455 HGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred cCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 127899999999999999999999974
No 53
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=3.2e-22 Score=231.13 Aligned_cols=267 Identities=18% Similarity=0.164 Sum_probs=200.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH-H---HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-T---AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~-~---a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.+ +..+||.++..++++++. +++++|+++...|+.... . ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg~e~i-vvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELESGKGA-VVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 34788999999997653 556777666644444331 357899999887774322 2 2346788888864
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++ +.+.+..|.++|+|+++
T Consensus 126 -----~d~e~l~~~i~---~~tklV~lesP~NPtG~v~-dl~~I~~la~~~gi~vIvDea~--~~~~~~~pl~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA---KKPKLILLETPSNPLVRVV-DIAELCQKAKAVGALVAVDNTF--LTPVLQKPLELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCc--cccccCCCcccCCCEEE
Confidence 58999999997 789999999995 678887 9999999999999999999665 44555788899999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++.| ++--+|++++++ ++.+.+.. ....+|.+.+ |+ -+|+...|.++
T Consensus 195 ~S~tK~l~G~---~d~~gG~i~~~~~~~~~~~~~-------------~~~~~G~~~~-p~---------~a~l~~rgl~T 248 (388)
T PRK08861 195 HSTTKYINGH---SDVIGGVLITKTKEHAEELAW-------------WGNCIGATGT-PF---------DSYMTLRGIRT 248 (388)
T ss_pred eecceeccCC---CcceeEEEEecHHHHHHHHHH-------------HHhccCCCCC-hH---------HHHHHHhcCCC
Confidence 9999999522 222367777754 33332210 0123344443 33 46788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+++++.+||..++++|+++ .+|.|||+++++.|++ .|++++..+++.+|+++|+.| ..+.+
T Consensus 249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~-~~~~s 327 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALF-SLAES 327 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcc-eEccC
Confidence 9999999999999999999985 5899999999999983 345555567899999999987 45566
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 328 ~--G----~~~sl~~~p~~~~ 342 (388)
T PRK08861 328 L--G----GVESLICHPASMT 342 (388)
T ss_pred C--C----CCcceeeCCCccc
Confidence 5 6 7899999999873
No 54
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=1.9e-20 Score=218.29 Aligned_cols=288 Identities=15% Similarity=0.130 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhcc-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~-~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
.+.+.++++.+++++|.+..++.+..|+|.+++.++.++.. ..+++++|+++..+|+++...++.. +..|++++.++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEcc
Confidence 46788899999999999888898999999888877655431 1137899999999999999988653 456888888754
Q ss_pred --------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001769 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1016)
Q Consensus 289 --------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k 357 (1016)
+++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|| ...+.|.+. +..++|+|+++++++
T Consensus 125 ~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD-~a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVD-AAQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEE-cchhcCCcccCccccCCCEEEEehh
Confidence 34555 7778999999987 68999999999999999999999994 344555443 446789999999995
Q ss_pred cccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~ 437 (1016)
|+.+| ++.|+++++++....+.+.+.| |.. ..+.+.||.|+ ..+.++.+++ .+
T Consensus 204 K~~gp-----~G~G~l~~~~~~~~~~~~~~~g------~~~-----------~~~~~~gt~~~---~~~~al~~al--~~ 256 (402)
T TIGR02006 204 KIYGP-----KGIGALYVRRKPRVRLEALIHG------GGH-----------ERGMRSGTLPT---HQIVGMGEAF--RI 256 (402)
T ss_pred hhcCC-----CceEEEEEccCCCCCCCceecC------CCc-----------cCCccCCCccH---HHHHHHHHHH--HH
Confidence 56433 3578999998765555443322 110 11346789888 4455555555 22
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--Cc-c--EEEEecCCHHHHHHHHHHcCceeec-----------
Q 001769 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FF-D--TVKVKCADAHAIASAAYKIEMNLRV----------- 501 (1016)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~--~~-~--~v~i~~~~~~~v~~~L~~~GI~~~~----------- 501 (1016)
+ .++++++.++..+++++++++|+++.++++.++. .. . .|+|......++...| +||.++.
T Consensus 257 ~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~ 333 (402)
T TIGR02006 257 A-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEP 333 (402)
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCc
Confidence 2 2478889999999999999999987548776421 12 1 2444422255666665 3554321
Q ss_pred --------c----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 502 --------V----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 502 --------~----~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+ ..+.||+|++.+||++|||+++++|..
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999964
No 55
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.88 E-value=1.5e-20 Score=217.60 Aligned_cols=288 Identities=17% Similarity=0.136 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHcCC-CCccEEEccchHHHHHHHHHHhcc---ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001769 210 LESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~-~~anasl~~~~Taa~eA~~~a~~~---~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1016)
.+.+.+....+++.+|. ++.++.+++|+|.++..++.++.+ .+.++++|+++..+||++...+.. ++..|++++.
T Consensus 41 ~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~~ 119 (382)
T TIGR03403 41 HPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVTY 119 (382)
T ss_pred HHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEEE
Confidence 44566666777777776 567898999999777765554421 112357899999999999998864 4567999888
Q ss_pred eCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001769 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1016)
Q Consensus 286 vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvg 354 (1016)
++. +++++ +++++++|++++| |.+|.+.|+++|.++||++|++++|++ ..+.|.+ .+..++|+|+++.
T Consensus 120 v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~-a~~~g~~~~~~~~~~~D~~~~ 198 (382)
T TIGR03403 120 LPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA-VQAIGKIPVDVQKAGVDFLSF 198 (382)
T ss_pred EecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEec-hhhcCCCccCccccCCCEEEE
Confidence 764 34555 6778999999886 689999999999999999999999943 3455533 2456789999999
Q ss_pred cCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH
Q 001769 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 355 s~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
+++||. |.||.|++++++++ .+.+.+.|. .. ..+++.||.|+ .+++++.+++
T Consensus 199 s~~K~~-----gp~G~g~l~vr~~~--~~~p~~~g~------~~-----------~~~~~~gt~~~---~~~~al~~al- 250 (382)
T TIGR03403 199 SAHKFH-----GPKGVGGLYIRKGV--ELTPLFHGG------EH-----------MGGRRSGTLNV---PYIVAMGEAM- 250 (382)
T ss_pred cchhhC-----CCCceEEEEECCCC--CCCCcccCC------CC-----------CCCcccCCcCh---HHHHHHHHHH-
Confidence 995564 33467899998765 233333331 10 01234688887 4555555555
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--C-ccEEEEecCC--HHHHHHHHHHcCceeec--------
Q 001769 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV-------- 501 (1016)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~--~-~~~v~i~~~~--~~~v~~~L~~~GI~~~~-------- 501 (1016)
.++ .++++.+.+++..+.++|.++|+++++++++++. . .+.+.|.+++ +.++.+.|.++||.++.
T Consensus 251 -~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~ 328 (382)
T TIGR03403 251 -RLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASED 328 (382)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCC
Confidence 222 3357888899999999999999988558887532 1 2244555554 77888889999998863
Q ss_pred ---------c------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 502 ---------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 502 ---------~------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+ ..+.||+|++.+||++|||+++++|+.
T Consensus 329 ~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 329 LEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred CCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 1 125799999999999999999999964
No 56
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=2.4e-20 Score=214.71 Aligned_cols=339 Identities=16% Similarity=0.209 Sum_probs=224.1
Q ss_pred CHHHHHHHHHHHhcCCCcc---ccccCCCCCCCCChHHHH--HHHH-hCCCcccccCCChhHHhhhHHHHHHHHHHHHHH
Q 001769 149 TESQMIEHMQKLASMNKVY---KSFIGMGYYNTHVPPVIL--RNIM-ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIAD 222 (1016)
Q Consensus 149 sE~e~~~~l~~la~~n~~~---~~~lG~g~y~~~~p~~i~--~~i~-~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~ 222 (1016)
||.|+++.+.++-+....+ +.++.++..| .|.+.. .... .+.+ .+....|..+.+.++++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~la~ 70 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNP--HPIAVKAYDMFIETNLG--------DPGLFPGTKKIEEEVVGSLGN 70 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCc--hHHHHHHHHHHhhcCCC--------CcccCccHHHHHHHHHHHHHH
Confidence 6899999999986655443 2244455443 333221 1111 1111 111223556677889999999
Q ss_pred HcCCCCccEEEccchHHHHHHHHHHhcc--c-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhh
Q 001769 223 LTGLPMSNASLLDEGTAAAEAMAMCNNI--Q-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDI 291 (1016)
Q Consensus 223 L~G~~~anasl~~~~Taa~eA~~~a~~~--~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L 291 (1016)
++|++..++.++.|+|.++..++.++.. . .+++++|++++..|+++...++ ..|++++.++. +++
T Consensus 71 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~----~~G~~~~~v~~~~~~~~d~~~l 146 (373)
T TIGR03812 71 LLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE----MLGLELRYAPLDEDYTVDVKDV 146 (373)
T ss_pred HhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH----HcCCeEEEEeeCCCCCcCHHHH
Confidence 9999888888899998777665544321 1 1256899999999999777653 45888777653 345
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-------C----CCCcccceEEEecCcc
Q 001769 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-------K----PPGELGADIVVGSAQR 358 (1016)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-------~----~pg~~GaDivvgs~k~ 358 (1016)
++ +++++..+++..| |.+|.+.|+++|+++||++|++++|+. .++.+.+ . .....|+|++.+++++
T Consensus 147 ~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~-a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K 225 (373)
T TIGR03812 147 EDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA-AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK 225 (373)
T ss_pred HHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc-CchhHHHHHHhcCCCCCCccccCCCCCEEEECccc
Confidence 55 6666655544444 689999999999999999999999943 3322111 0 1122489999999865
Q ss_pred ccc-cCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHH
Q 001769 359 FGV-PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1016)
Q Consensus 359 lg~-P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~ 437 (1016)
|+. |. |..|+++.++++++.+... .+ |.. . .+ + ....||.|. ....++.++ +.+
T Consensus 226 ~~~~~~----~~G~~~~~~~~~~~~l~~~----------~~-~~~-~-~~-~--~~~~gt~~~---~~~~~~~~~--l~~ 280 (373)
T TIGR03812 226 MGLSPI----PAGGILFRSKSYLKYLSVD----------AP-YLT-V-KK-Q--ATITGTRSG---ASAAATYAV--IKY 280 (373)
T ss_pred cCCCcC----CceEEEEeCHHHHhhhccc----------Cc-ccC-C-CC-C--cceEeechh---HHHHHHHHH--HHH
Confidence 643 32 3345776777777665210 00 100 0 00 0 011244443 122233333 477
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeecc-cCCeEEEEeccCCC
Q 001769 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTT 516 (1016)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~-~~~~lris~te~~t 516 (1016)
++.+|++++.+++.+++++|+++|+++| ++.+.++..+.+.+..++..++.++|.++||.++.. .+..+|+|++.++|
T Consensus 281 l~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t 359 (373)
T TIGR03812 281 LGREGYRKIVAECMENTRYLVEELKKIG-FEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVT 359 (373)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCC
Confidence 8899999999999999999999999997 654433444556676666678999999999998765 46789999999999
Q ss_pred HHHHHHHHHHHh
Q 001769 517 LEDVDKLFIVFA 528 (1016)
Q Consensus 517 ~edid~ll~aL~ 528 (1016)
++|+++++++|.
T Consensus 360 ~edid~l~~~L~ 371 (373)
T TIGR03812 360 REHIEEFLEDLK 371 (373)
T ss_pred HHHHHHHHHHHh
Confidence 999999999985
No 57
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=1.8e-20 Score=216.69 Aligned_cols=291 Identities=13% Similarity=0.088 Sum_probs=209.3
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 206 sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~-~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
.....+.+.++++.+|+++|.+..++.+..|+|.++..++.++... .+++++|+++..+||++...++. ++..|++++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v~ 116 (381)
T PRK02948 38 GGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQS-LESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHH-HHhCCCEEE
Confidence 3444567889999999999998888888888898877665554210 12678999999999999998865 455788888
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEE
Q 001769 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1016)
Q Consensus 285 ~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivv 353 (1016)
.++. +++++ +.+++++|++++| |.+|.+.|+++|+++||++|++++|| ..+++|... +..++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD-~~~~~g~~~~~~~~~~~d~~~ 195 (381)
T PRK02948 117 EIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSD-CVQTFGKLPIDVFEMGIDSLS 195 (381)
T ss_pred EEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEE-ChhhccccccCcccCCCCEEE
Confidence 8764 34555 6778899999998 68999999999999999999999995 345555432 34578999999
Q ss_pred ecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 354 gs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
.+++|+.+| ||.|++++++++. +.....+ . .+..+.+.+|.|+ .+..++.+++
T Consensus 196 ~s~~K~~gp-----~G~G~l~~~~~~~--~~~~~~~-------~----------~~~~~~~~~t~~~---~~~~a~~~al 248 (381)
T PRK02948 196 VSAHKIYGP-----KGVGAVYINPQVR--WKPVFPG-------T----------THEKGFRPGTVNV---PGIAAFLTAA 248 (381)
T ss_pred ecHHhcCCC-----CcEEEEEEcCCCC--CCCcccC-------C----------CCCCCcCCCCccH---HHHHHHHHHH
Confidence 998445323 4578999887641 1100000 0 0112346678887 3444555554
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc--C-CC-Cc-cEEEEecCC--HHHHHHHHHHcCceeecc----
Q 001769 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--G-LP-FF-DTVKVKCAD--AHAIASAAYKIEMNLRVV---- 502 (1016)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~--~-~~-~~-~~v~i~~~~--~~~v~~~L~~~GI~~~~~---- 502 (1016)
.++ .++++++.+++.++.++++++|+++| +++. + .. .. ..+.+..++ +.++...|.++||.++..
T Consensus 249 --~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~ 324 (381)
T PRK02948 249 --ENI-LKNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQ 324 (381)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcC
Confidence 222 13578889999999999999999987 5543 2 11 12 234455453 677888898899988631
Q ss_pred -------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 503 -------------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 -------------------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+.+|+|++.+||++|+++++++|..
T Consensus 325 ~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 325 VGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999964
No 58
>PLN02590 probable tyrosine decarboxylase
Probab=99.88 E-value=9.6e-21 Score=225.30 Aligned_cols=338 Identities=13% Similarity=0.115 Sum_probs=226.8
Q ss_pred cCCCHHHHHHHHHHHhccccCCCcccccccccc--CCCCh-hhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHH
Q 001769 566 KYHTEHELLRYIHLLQSKELSLCHSMIPLGSCT--MKLNA-TTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLC 642 (1016)
Q Consensus 566 ~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t--~~~~~-~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~la 642 (1016)
.+.+-+++++.+.+.-.....-..+.-++|+-. ..+.. ..++... ..+-+.+.- +.+++..++..++.+|++
T Consensus 106 ~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~s----a~n~~~~~~-~~sPa~t~lE~~vi~wl~ 180 (539)
T PLN02590 106 RPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNA----GLSVVGFTW-LTSPAATELEIIVLDWLA 180 (539)
T ss_pred CCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHH----hcccccCCc-ccCchhHHHHHHHHHHHH
Confidence 456788999999876555533233445666421 11111 1222211 112223333 668899999999999999
Q ss_pred HHhCCCce--------eeecCChHHHHHHHHHHHHHHHHh-cCC--CCCCEEEEcCCCccccHHHHHhCCc---EEEEEc
Q 001769 643 TITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHKA-RGD--HHRNVCIIPVSAHGTNPATAAMCGM---KIVSVG 708 (1016)
Q Consensus 643 eL~G~~~~--------~l~~~sGa~ae~a~l~air~~~~~-~g~--~~~~~Vlv~~saHg~~~~~a~~~G~---~vv~v~ 708 (1016)
+++|++.. .++.++|+++++.++.++|..... .|. .++-.|++++.+|.+..+.+.++|+ +++.||
T Consensus 181 ~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp 260 (539)
T PLN02590 181 KLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLK 260 (539)
T ss_pred HHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEe
Confidence 99999852 355677888888888888864322 121 1334677899999999999999998 599999
Q ss_pred CCC--CCCCCHHHHHHHHHcC---CCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC---
Q 001769 709 TDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--- 779 (1016)
Q Consensus 709 ~d~--~g~iD~~~L~~~i~~~---~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p--- 779 (1016)
+|. ++++|+++|+++|++. +..+.+|+.+..+ .+|.|| ||++|+++|+++|+|+|||||..-.. +..|
T Consensus 261 ~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD-pl~~Ia~i~~~~g~WlHVDaA~GG~a--l~~~~~r 337 (539)
T PLN02590 261 TDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD-PLVPLGNIAKKYGIWLHVDAAYAGNA--CICPEYR 337 (539)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCeEEEecchhhhh--hcChhhH
Confidence 984 5799999999999732 1236778888876 589999 99999999999999999998753111 1222
Q ss_pred ----CccCCcEEEeCccccccCCCCCCCCeEEEEEEccc--cc-------ccCCCCccccCCCCCCCC-cCCCCCCccCC
Q 001769 780 ----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LA-------PFLPSHPVVSTGGIPAPE-KSQPLGTIAAA 845 (1016)
Q Consensus 780 ----g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~--l~-------~~lpg~~~g~~g~~~~re-~~~~~g~i~s~ 845 (1016)
|-..+|.++.++|||+.+|++ .|+++++++ +. ++++... ...+. ..+ .....+ +
T Consensus 338 ~~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL~~~~-~~~~~--~~d~~d~~i~--l-- 405 (539)
T PLN02590 338 KFIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYLEFKV-SKKDT--VVNYKDWQIS--L-- 405 (539)
T ss_pred HHhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHhCCcc-ccccc--CCCccccCCC--C--
Confidence 334589999999999998864 468888863 21 2222100 00000 000 011111 1
Q ss_pred ccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeEEEEEecCc---hhHHHHHH
Q 001769 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRGL---KEELDRYC 920 (1016)
Q Consensus 846 ~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~i~~~~~~---~~~ld~f~ 920 (1016)
+....+++.|+.|+.+|.+||+++.++++++|+|+.+.|++ .|+++.+ +.+.-++|++.+. .++++++
T Consensus 406 --sRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~----~~l~iVcFr~~~~~~~~~~~~~l- 478 (539)
T PLN02590 406 --SRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT----RYFSLVCFRLAPVDGDEDQCNER- 478 (539)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CceEEEEEEecCCCCCHHHHHHH-
Confidence 22345788899999999999999999999999999999987 5888753 4566677887652 1234444
Q ss_pred HHHHHHHHHHHH
Q 001769 921 DALISIREEIAQ 932 (1016)
Q Consensus 921 ~~l~~i~~e~~~ 932 (1016)
-..|++++.+
T Consensus 479 --n~~l~~~l~~ 488 (539)
T PLN02590 479 --NRELLAAVNS 488 (539)
T ss_pred --HHHHHHHHHh
Confidence 2445555554
No 59
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.8e-21 Score=227.96 Aligned_cols=279 Identities=20% Similarity=0.227 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+. .+.++||+++..++++++ . +++++||++...|+... ..+...|+++++++
T Consensus 71 ~~~le~~la~l~g~~~-~v~fsSG~~Ai~~al~~l---l-----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLEGGVH-AVAFASGQAAETAAILNL---A-----GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHhCCCe-EEEeCCHHHHHHHHHHHh---c-----CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 4578999999999864 566778876654444332 1 35789999988887653 23457899999997
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+. .|+++++++|+ ++|++|++++| |.+|.+. ||++|+++||++|++++||+++ +.+....|.++|+|+++
T Consensus 141 ~~---~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~-di~~I~~la~~~gi~livD~t~--a~g~~~~p~~~GaDivv 211 (437)
T PRK05613 141 NP---DDPESWQAAVQ---PNTKAFFGETFANPQADVL-DIPAVAEVAHRNQVPLIVDNTI--ATAALVRPLELGADVVV 211 (437)
T ss_pred CC---CCHHHHHHhCC---ccCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCeEEEECCC--ccccccChHHhCCCEEE
Confidence 33 38999999998 78999999887 5678776 9999999999999999999876 34555788899999999
Q ss_pred eCccccccCCCCCCCCe-EEEEEEcccccc--------cCCCCccccCCC--------CCC-------C-CcCCCCCCcc
Q 001769 789 LNLHKTFCIPHGGGGPG-MGPIGVKKHLAP--------FLPSHPVVSTGG--------IPA-------P-EKSQPLGTIA 843 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg-~G~i~~~~~l~~--------~lpg~~~g~~g~--------~~~-------r-e~~~~~g~i~ 843 (1016)
+|+||+++ || |-+ +|+++.+.++.. .+|.. ...... +.. + .....+|.+.
T Consensus 212 ~S~~K~l~-G~---gd~~gG~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 286 (437)
T PRK05613 212 ASLTKFYT-GN---GSGLGGVLIDGGKFDWTVERDGKPVFPYF-VTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATL 286 (437)
T ss_pred eeccceec-CC---CcceeEEEEecCcccccccccccccCCCC-CCCccccccccccccchHHHHHHHHHHHHHhcCCCC
Confidence 99999985 33 223 455554433210 01100 000000 000 0 0011233333
Q ss_pred CCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EE
Q 001769 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IV 907 (1016)
Q Consensus 844 s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~ 907 (1016)
+ |+ -+|+...|.++|..+++++.+||.+++++|+++ .+|.|||+.+++.|+. .|
T Consensus 287 ~-p~---------~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf 356 (437)
T PRK05613 287 S-PF---------NAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSF 356 (437)
T ss_pred C-HH---------HHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEE
Confidence 2 22 577889999999999999999999999999985 5899999988887763 34
Q ss_pred EecCchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 908 DLRGLKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 908 ~~~~~~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
++++..++..+|+++|+.+ ..+.++ | +.++|..+|.++.
T Consensus 357 ~l~~~~~~~~~f~~~l~l~-~~~~sl--G----~~~sLv~~p~~~~ 395 (437)
T PRK05613 357 DIKGGKDEAWAFIDALKLH-SNLANI--G----DVRSLVVHPATTT 395 (437)
T ss_pred EecCCHHHHHHHHHhCCcc-eEccCC--C----CCchhhcCCCccC
Confidence 4444556889999999987 455665 6 7899999998763
No 60
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=8.6e-22 Score=227.18 Aligned_cols=263 Identities=18% Similarity=0.112 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~ 709 (1016)
...+++.++.+.|.+.. +.++||.+|..++++++- +++|+||+++..++.+.. .+..+|+++++++.
T Consensus 66 ~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~ 136 (395)
T PRK05967 66 TDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP 136 (395)
T ss_pred HHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC
Confidence 45688889999876654 566677766655544432 367899999988876553 35678999999875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ +.++++++++ ++|++|++++|+ +++.+. ||++|+++||++|++++||.+ ++.+.+++|.++|+|+++
T Consensus 137 ~-----~~e~l~~al~---~~TklV~lesPsNP~l~v~-dl~~I~~la~~~g~~vvVD~t--~a~p~~~~pl~~GaDivv 205 (395)
T PRK05967 137 E-----IGAGIAKLMR---PNTKVVHTEAPGSNTFEMQ-DIPAIAEAAHRHGAIVMMDNT--WATPLYFRPLDFGVDISI 205 (395)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHhCCEEEEECC--ccCceecChhHcCCCEEE
Confidence 2 4688999998 889999999985 567776 999999999999999999954 456667899999999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
+|++|+++ |.|+--+|+++.++++++.+-. ....+|.+.+ |+ -+|+...|.++|
T Consensus 206 ~S~tKy~~---Gh~d~~~G~v~~~~~~~~~l~~-------------~~~~~G~~~~-p~---------da~l~~rgl~Tl 259 (395)
T PRK05967 206 HAATKYPS---GHSDILLGTVSANEKCWPQLLE-------------AHGTLGLCAG-PD---------DTYQILRGLRTM 259 (395)
T ss_pred EecccccC---CCCCeeEEEEEcCHHHHHHHHH-------------HHHHcCCCCC-HH---------HHHHHHcCcccH
Confidence 99999975 2244557777766654333210 0112343332 33 478899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecC----chhHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRG----LKEELDRYCDALISIREE 929 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~----~~~~ld~f~~~l~~i~~e 929 (1016)
..+++++.+||..++++|+++ -+|.|||+++++.|+. .|++++ ..+...+|+++|+.| ..
T Consensus 260 ~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~-~~ 338 (395)
T PRK05967 260 GIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIF-GL 338 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcc-eE
Confidence 999999999999999999985 5899999999998883 344542 356789999999976 45
Q ss_pred HHHHhcCCCCCCCCccccCC
Q 001769 930 IAQIENGKADIHNNVLKGAP 949 (1016)
Q Consensus 930 ~~~~~~g~~~~~~~~l~~ap 949 (1016)
+.++ | +.++|..++
T Consensus 339 ~~sl--G----~~~sLi~~~ 352 (395)
T PRK05967 339 GYSW--G----GYESLALHV 352 (395)
T ss_pred ccCC--C----CcceeeeeC
Confidence 5665 6 778888763
No 61
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.87 E-value=9e-20 Score=217.26 Aligned_cols=324 Identities=16% Similarity=0.184 Sum_probs=211.7
Q ss_pred CCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhh---hhcccccccccccCCCCCchhhhhHHHHHHH
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT---EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1016)
Q Consensus 560 ~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~---~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~e 636 (1016)
.+| ..+.+..++++.+.+.-..+.....+.-++|+-+.-+++.. ..+.. -.|-+.+.- +.++...++..+
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~l~~----~lN~n~~~~-~~spa~t~lE~~ 133 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSKLMV----ALNQNLVKI-ETSKAFTPLERQ 133 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHHHHH----HhcCCccee-ecCcchHHHHHH
Confidence 456 35567778888865543333222234556775322222221 11111 111122222 668888999999
Q ss_pred HHHHHHHHhCC------------Cc-e-eeecCChHHHHHHHHHHHHHHHHhc-----C-------------CCCCCEEE
Q 001769 637 LGEWLCTITGF------------DS-F-SLQPNAGAAGEYAGLMVIRAYHKAR-----G-------------DHHRNVCI 684 (1016)
Q Consensus 637 l~~~laeL~G~------------~~-~-~l~~~sGa~ae~a~l~air~~~~~~-----g-------------~~~~~~Vl 684 (1016)
+..|++++++. +. . ..+.++|+.+++.++.++|...... + ..++..|+
T Consensus 134 v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~ 213 (522)
T TIGR03799 134 VLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAIL 213 (522)
T ss_pred HHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEE
Confidence 99999999852 11 1 3556778888888888888643110 0 01345799
Q ss_pred EcCCCccccHHHHHhCCc---EEEEEcCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcCC-CCccccccHHHHHHHHH
Q 001769 685 IPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIH 757 (1016)
Q Consensus 685 v~~saHg~~~~~a~~~G~---~vv~v~~d~~g~iD~~~L~~~i~~~---~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~ 757 (1016)
+++.+|.++.+.+...|+ +++.||+|++|++|+++|+++|++. +.++.+|+.+..+ .+|.++ ||++|+++|+
T Consensus 214 ~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD-pl~eIa~i~~ 292 (522)
T TIGR03799 214 VSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID-PLDEMADIAQ 292 (522)
T ss_pred ECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC-CHHHHHHHHH
Confidence 999999999999999998 8999999999999999999999631 2235555555554 589999 9999999999
Q ss_pred HcCcEEEEEccccccccCcCC------CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCC---CccccC
Q 001769 758 DNGGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS---HPVVST 827 (1016)
Q Consensus 758 ~~g~lv~vDga~~~a~~~l~~------pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg---~~~g~~ 827 (1016)
++|+++|||+|+..+.. +.. .+-.++|.+++|+|||+..|+ |+|++++++ .+.+.+.. .+.. .
T Consensus 293 ~~g~~lHVDaA~gg~~~-~~~~~r~~l~gle~aDSit~d~HK~l~~P~-----g~G~llvr~~~~~~~~~~~~~Yl~~-~ 365 (522)
T TIGR03799 293 ELGCHFHVDAAWGGATL-LSNTYRHLLKGIERADSVTIDAHKQLYVPM-----GAGMVLFKDPALMSAIEHHAEYILR-K 365 (522)
T ss_pred HcCCeEEEEchhhhHHH-hCHHHHHHhcCchhCCEEEEChhhcCCcCc-----ccEEEEEeCHHHHHHhccCcchhcC-C
Confidence 99999999998743221 111 122479999999999996554 567898885 33222211 1100 0
Q ss_pred CCCCCCC-cCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeE
Q 001769 828 GGIPAPE-KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHE 904 (1016)
Q Consensus 828 g~~~~re-~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he 904 (1016)
|. .+ ...... ++. ...++..|+.|+.+|.+|++++.++++++|+|+.++|++ .++++.+ +..+-
T Consensus 366 ~~---~d~~~~~le--gsR----~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~----p~l~i 432 (522)
T TIGR03799 366 GS---KDLGSHTLE--GSR----PGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE----PELCL 432 (522)
T ss_pred CC---Cccccceee--cCc----chHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC----CCccE
Confidence 00 00 001111 111 123456799999999999999999999999999999986 5777643 34555
Q ss_pred EEEEecC
Q 001769 905 FIVDLRG 911 (1016)
Q Consensus 905 ~i~~~~~ 911 (1016)
+++++.+
T Consensus 433 v~Fr~~p 439 (522)
T TIGR03799 433 LTYRYVP 439 (522)
T ss_pred EEEEEeC
Confidence 6666543
No 62
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=4.2e-21 Score=223.64 Aligned_cols=281 Identities=15% Similarity=0.112 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|...+ +.++||..|..++++++. +++|+||++...++..... +...|+++++++.
T Consensus 63 v~~lE~~la~leg~~~a-v~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGGVGA-VATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 34788999999998764 567888777755555441 3678999998877532232 4678999999965
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.+|+++++++|+ ++|++|++++|+ .++.+. ||++|+++||++|+++++| ++++.+.+.+|.+.|+||++
T Consensus 134 ----~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~gi~livD--~T~~tP~~~~pl~~GADIvv 203 (432)
T PRK06702 134 ----NLTADEIVALAN---DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELEVPFIVD--NTLATPYLCQAFEHGANIIV 203 (432)
T ss_pred ----CCCHHHHHHhCC---cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcCCEEEEE--CCCCchhhCChhhcCCCEEE
Confidence 369999999998 899999999985 566665 9999999999999999999 55677778899999999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCC--CccccC------------CC---CC-CC-CcCCCCCCccCCccch
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVST------------GG---IP-AP-EKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg--~~~g~~------------g~---~~-~r-e~~~~~g~i~s~~~G~ 849 (1016)
+|++|+++ .|+ +--+|+++....+.-.... .++... |. +. .+ ...+..|... +|+
T Consensus 204 ~S~TKy~~-Ghs--d~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-sp~-- 277 (432)
T PRK06702 204 HSTTKYID-GHA--SSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCM-SPF-- 277 (432)
T ss_pred EccccccC-CCc--ceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCC-CHH--
Confidence 99999996 332 2234555533221100000 000000 00 00 00 0011223222 122
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCch
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGLK 913 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~~ 913 (1016)
-+||...|.+.|..+.+++.+||..++++|+++ -.|.|||+++++.|++ .|.+++..
T Consensus 278 -------~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~ 350 (432)
T PRK06702 278 -------NAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGL 350 (432)
T ss_pred -------HHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH
Confidence 577889999999999999999999999999975 4789999988887772 34444455
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 914 EELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 914 ~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
++..+|+++|+.+. .+.++ | +.++|..+|.++.
T Consensus 351 ~~~~~f~~~l~l~~-~a~sl--G----g~~Slv~~p~~~t 383 (432)
T PRK06702 351 EAAKEFIANVKLAT-LVTHV--A----DARTCVIHPASTT 383 (432)
T ss_pred HHHHHHHHhCccce-ecccc--C----CCCcceECCCCCC
Confidence 67899999999884 66665 6 7899999999873
No 63
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=1.3e-20 Score=219.34 Aligned_cols=312 Identities=18% Similarity=0.212 Sum_probs=220.6
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|...++|||++.+|.+..+++. ++.+ |.+ ++-.+.+..|+...+.++|+.+|+++|.+. +.+|++|..++.+
T Consensus 106 ~FsSndYLGL~~~p~v~~a~~~-ai~~---yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~ 177 (476)
T PLN02955 106 LFSGNDYLGLSSHPTISNAAAN-AAKE---YGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMA 177 (476)
T ss_pred EeeccCccCCCCCHHHHHHHHH-HHHH---cCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHH
Confidence 4456789999988877777764 5543 333 333567889999999999999999999988 8899999999888
Q ss_pred HHHHhc-----c------ccCCCCEEEEcCCCCHHHHHHHHHhhcCC-CeE---EEEeCchhhhc-c---CCCEeEEEEE
Q 001769 244 MAMCNN-----I------QKGKKKTFIIASNCHPQTIDICITRADGF-DIK---VVVSDLKDIDY-K---SGDVCGVLVQ 304 (1016)
Q Consensus 244 ~~~a~~-----~------~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~-gi~---v~~vd~~~L~~-l---~~~t~~V~v~ 304 (1016)
++-++. . ..++++.|+.+..+|+|+++.++. ++.. +.+ +.+.|+++|++ + .++.+ ++|+
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~-~Vv~ 255 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVYRHCDMYHLNSLLSSCKMKRK-VVVT 255 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEeCCCCHHHHHHHHHhCCCCce-EEEE
Confidence 776651 0 013567899999999999999875 3222 344 45577888876 4 23334 4455
Q ss_pred cC--CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCcceEE
Q 001769 305 YP--GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAF 372 (1016)
Q Consensus 305 ~p--n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg-----~~----GaDivvgs~-k~lg~P~g~GGP~~Gf 372 (1016)
.+ ++.|.+.|+++|.++++++|++++| +|.++.|++.+-| .+ ..||++++. |.||.. | ||
T Consensus 256 EgV~SmdGdiapL~eL~~L~~~~ga~LiV-DEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~---G----Gf 327 (476)
T PLN02955 256 DSLFSMDGDFAPMEELSQLRKKYGFLLVI-DDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH---G----GF 327 (476)
T ss_pred eCCCCCCCCcCCHHHHHHHHHHcCcEEEE-cccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc---C----ce
Confidence 43 8999999999999999999999999 5788888776532 23 368999996 988642 3 68
Q ss_pred EEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHH-HhCcccHHHHHHHHH
Q 001769 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVH 451 (1016)
Q Consensus 373 l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~-~~g~~Gl~~ia~~~~ 451 (1016)
+++++++++.+ +..+.++|+|+...+++++++..+ .+...+ ....++++
T Consensus 328 i~gs~~~~~~l-----------------------------~~~~~~~ifStalpp~~aaa~laal~l~~~~-~~~r~~L~ 377 (476)
T PLN02955 328 IACSKKWKQLI-----------------------------QSRGRSFIFSTAIPVPMAAAAYAAVVVARKE-KWRRKAIW 377 (476)
T ss_pred eecHHHHHHHH-----------------------------HHhCCCCeecccccHHHHHHHHHHHHHHhcC-HHHHHHHH
Confidence 88888766554 112335555554444444333211 111222 34678889
Q ss_pred HHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HHHHHHHHHHcCceeecc-----c--CCeEEEEeccCCCHHHHHHH
Q 001769 452 GLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKL 523 (1016)
Q Consensus 452 ~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~-----~--~~~lris~te~~t~edid~l 523 (1016)
++.+|+++. .| +.+ ..|.+ .+.+..+. +.++.++|.++||++..+ + ..++|++++..||++||+++
T Consensus 378 ~n~~~fr~~---~G-~~~-~sPI~-pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l 451 (476)
T PLN02955 378 ERVKEFKAL---SG-VDI-SSPII-SLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL 451 (476)
T ss_pred HHHHHHHHh---cC-CCC-CCCEE-EEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence 999999884 35 543 22322 34444444 788999999999987543 2 25799999999999999999
Q ss_pred HHHHhC
Q 001769 524 FIVFAG 529 (1016)
Q Consensus 524 l~aL~~ 529 (1016)
+++|..
T Consensus 452 v~~L~~ 457 (476)
T PLN02955 452 ITALSS 457 (476)
T ss_pred HHHHHH
Confidence 999963
No 64
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.86 E-value=1.1e-21 Score=225.70 Aligned_cols=266 Identities=22% Similarity=0.264 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~ 709 (1016)
...+++.|++|.|.+.+ +..+||-.|..++++++. +++++|+++...++.-... ...+|+++.+++.
T Consensus 57 ~~~le~~la~Le~g~~a-~~~~SGmaAi~~~l~~ll--------~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 57 VRALEQRLAALEGGEDA-LLFSSGMAAISAALLALL--------KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHHT-SEE-EEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred HHHHHHHHHHhhcccce-eeccchHHHHHHHHHhhc--------ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 34788999999998765 445688666655555442 2568899988766533322 4468999999986
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC-CccccccHHHHHHHHHHcC-cEEEEEccccccccCcCCCCccCCcEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNG-GQVYMDGANMNAQVGLTSPGYIGADVC 787 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~-~G~i~~di~~I~~ia~~~g-~lv~vDga~~~a~~~l~~pg~~GaDi~ 787 (1016)
.|+++++++++ ++|++|++++|++ +.-+ .||++|+++||++| ++++|| |+++.+.+++|.++|+||+
T Consensus 128 -----~d~~~l~~~l~---~~t~~v~~EspsNP~l~v-~Dl~~i~~~a~~~g~~~~vVD--nT~atp~~~~pL~~GaDiv 196 (386)
T PF01053_consen 128 -----TDLEALEAALR---PNTKLVFLESPSNPTLEV-PDLEAIAKLAKEHGDILVVVD--NTFATPYNQNPLELGADIV 196 (386)
T ss_dssp -----TSHHHHHHHHC---TTEEEEEEESSBTTTTB----HHHHHHHHHHTTT-EEEEE--CTTTHTTTC-GGGGT-SEE
T ss_pred -----hhHHHHHhhcc---ccceEEEEEcCCCccccc-ccHHHHHHHHHHhCCceEEee--ccccceeeeccCcCCceEE
Confidence 58999999998 8999999999954 4444 49999999999999 999999 7888888899999999999
Q ss_pred EeCccccccCCCCCCCCeEEEEEEcc--cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhCh
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~~--~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~ 865 (1016)
+.|++|+++ +| |.--+|+++++. ++...+.. ..+..|++.+ |+ -+|+...|.
T Consensus 197 v~S~TKyl~-Gh--sdv~~G~vv~~~~~~~~~~l~~-------------~~~~~G~~~~-p~---------da~ll~rgl 250 (386)
T PF01053_consen 197 VHSATKYLS-GH--SDVMGGAVVVNGSSELYDRLRE-------------FRRLLGATLS-PF---------DAWLLLRGL 250 (386)
T ss_dssp EEETTTTTT-TS--SSE-EEEEEESSHHHHHHHHHH-------------HHHHHT-B---HH---------HHHHHHHHH
T ss_pred Eeecccccc-CC--cceeeEEEEECchhhhhhhhcc-------------hhhhcCccch-HH---------HHHHHhcCC
Confidence 999999996 33 333478888875 34333210 0112343332 22 577888899
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHH
Q 001769 866 KGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEI 930 (1016)
Q Consensus 866 eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~ 930 (1016)
++|..+++++.+||..++++|+++ -+|.|||+++++.|++ .|++++..+.+.+|+|+|+.| ...
T Consensus 251 ~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~-~~~ 329 (386)
T PF01053_consen 251 RTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLF-SIA 329 (386)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSS-EES
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhH-hhh
Confidence 999999999999999999999986 5899999999998873 456666556899999999866 233
Q ss_pred HHHhcCCCCCCCCccccCCCCC
Q 001769 931 AQIENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 931 ~~~~~g~~~~~~~~l~~ap~~~ 952 (1016)
.++ | ..++|...|.++
T Consensus 330 ~Sl--G----g~~SLi~~p~~~ 345 (386)
T PF01053_consen 330 PSL--G----GVESLISHPAST 345 (386)
T ss_dssp SS---S----SSS-EEEETTCT
T ss_pred hhc--C----Ccccccccccch
Confidence 343 5 789999999887
No 65
>PLN02880 tyrosine decarboxylase
Probab=99.86 E-value=6.5e-20 Score=217.88 Aligned_cols=325 Identities=14% Similarity=0.109 Sum_probs=215.4
Q ss_pred cCCCHHHHHHHHHHHhccccCCCcccccccc--ccCCCChh-hhhcccccccccccCCCC-CchhhhhHHHHHHHHHHHH
Q 001769 566 KYHTEHELLRYIHLLQSKELSLCHSMIPLGS--CTMKLNAT-TEMMPVTWPSFANIHPFA-PADQAQGYQEMFNNLGEWL 641 (1016)
Q Consensus 566 ~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs--~t~~~~~~-~~~~~~~~~~f~~~~P~~-p~e~~qG~~e~~~el~~~l 641 (1016)
++.+-.++++.+.+.-........+.-++|+ |..-+... .++.... +++.. ..+.+++..++..++.+|+
T Consensus 58 ~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~------~n~~~~~~~~sp~~~~lE~~vi~wl 131 (490)
T PLN02880 58 QPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAG------LNIVGFSWITSPAATELEMIVLDWL 131 (490)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHh------hccCCcccccCcccHHHHHHHHHHH
Confidence 5568889999998754444322234455664 22111111 1121111 12111 1145778889999999999
Q ss_pred HHHhCCCce--------eeecCChHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCccccHHHHHhCCcE---EEEE
Q 001769 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGMK---IVSV 707 (1016)
Q Consensus 642 aeL~G~~~~--------~l~~~sGa~ae~a~l~air~~~~-~~g~~--~~~~Vlv~~saHg~~~~~a~~~G~~---vv~v 707 (1016)
++++|++.. .++.++|+++++.+++++|.+.. ..|.. ++-.|++++.+|.+..+.+.++|+. ++.|
T Consensus 132 ~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 132 AKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL 211 (490)
T ss_pred HHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe
Confidence 999999853 35567778888888888886432 22211 3346778999999999999999994 8899
Q ss_pred cCCC--CCCCCHHHHHHHHHcC---CCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCc-----
Q 001769 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL----- 776 (1016)
Q Consensus 708 ~~d~--~g~iD~~~L~~~i~~~---~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l----- 776 (1016)
|+|. ++++|+++|+++|++. +..+.+|+.+.++ .+|.++ ||++|+++|+++|+++|||||...+....
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD-pl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~ 290 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD-PLLELGKIAKSNGMWFHVDAAYAGSACICPEYRH 290 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC-cHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH
Confidence 9975 5799999999999632 2236778888876 589999 99999999999999999999864221111
Q ss_pred CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEccc--ccccC---CCCccccC-CCCCCCCcCCCCCCccCCccchh
Q 001769 777 TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL---PSHPVVST-GGIPAPEKSQPLGTIAAAPWGSA 850 (1016)
Q Consensus 777 ~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~--l~~~l---pg~~~g~~-g~~~~re~~~~~g~i~s~~~G~a 850 (1016)
...|-.++|.++.++|||+++|. +.|++++++. +.+.+ +..+.... .....++ ..... .+.|..
T Consensus 291 ~l~gie~aDSit~d~HKwl~~P~-----~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~----~~~~~-i~~~rr 360 (490)
T PLN02880 291 YIDGVEEADSFNMNAHKWFLTNF-----DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVD----YKDWQ-IPLGRR 360 (490)
T ss_pred HhcCchhcCEEEECchhhcCCCc-----cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCC----hhccC-cCCCCc
Confidence 01344579999999999998775 4578988852 11111 00000000 0000000 00000 012233
Q ss_pred hHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeEEEEEecC
Q 001769 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
..++..|+.|+.+|.+|++++.++++++|+|+++.|++ .++++.+ +...-++|++.+
T Consensus 361 ~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~----~~~~iv~Fr~~~ 419 (490)
T PLN02880 361 FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP----RIFSLVCFRLVP 419 (490)
T ss_pred ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC----CceEEEEEEEeC
Confidence 45678899999999999999999999999999999986 4777653 345566777765
No 66
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.8e-20 Score=219.54 Aligned_cols=279 Identities=19% Similarity=0.194 Sum_probs=198.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc-cH---HHHHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NP---ATAAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~-~~---~~a~~~G~~vv~v~~d 710 (1016)
..+++.++++.|.+. .+.+++|.+|..+++.++. +++++|+++...|+. +. ..+...|++++.++.
T Consensus 67 ~~Le~~lA~leg~~~-al~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~- 136 (431)
T PRK08248 67 DVFEKRIAALEGGIG-ALAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP- 136 (431)
T ss_pred HHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence 468899999999765 4667888776654544431 357899999887753 32 235678999999987
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++ +.+....|.++|+|+++.
T Consensus 137 ----~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~-di~~I~~la~~~gi~vIvD~t~--a~~~~~~pl~~gaDivv~ 206 (431)
T PRK08248 137 ----SDPENFEAAIT---DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHGIPLIVDNTF--ASPYLLRPIEHGADIVVH 206 (431)
T ss_pred ----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEeCCC--CccccCChhHcCCCEEEE
Confidence 48999999997 78999999998 5689987 9999999999999999999765 344456788899999999
Q ss_pred CccccccCCCCCCCCeEEEEEEccccc-c---c---CCCCccccCCCCC-C-----------C-CcCCCCCCccCCccch
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLA-P---F---LPSHPVVSTGGIP-A-----------P-EKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~-~---~---lpg~~~g~~g~~~-~-----------r-e~~~~~g~i~s~~~G~ 849 (1016)
|+||+++.| |..-+|+++.+.+.. . . +..+.....+... . + .....+|...+ |+
T Consensus 207 S~tK~lgg~---g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~-p~-- 280 (431)
T PRK08248 207 SATKFIGGH---GTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS-PF-- 280 (431)
T ss_pred cCccccCCC---CCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC-HH--
Confidence 999999632 323345555444321 1 0 1100000000000 0 0 00112232222 22
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCch
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGLK 913 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~~ 913 (1016)
-+|+...|.+.|..+.+++.+||.+++++|+++ -+|.|||+++++.|++ .|++++..
T Consensus 281 -------~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~ 353 (431)
T PRK08248 281 -------NSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGV 353 (431)
T ss_pred -------HHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH
Confidence 577889999999999999999999999999985 5799999999988873 34444556
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 914 EELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 914 ~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
++..+|+++|+.| ..+.++ | +.++|..+|.++.
T Consensus 354 ~~~~~f~~~l~l~-~~~~sl--G----~~~sl~~~p~~~~ 386 (431)
T PRK08248 354 EAGKKLIDSVKLF-SHLANV--G----DSKSLIIHPASTT 386 (431)
T ss_pred HHHHHHHHhCCcc-eecccc--C----CCCeeeeCCCcCc
Confidence 6899999999987 355665 6 7899999998873
No 67
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=6.5e-21 Score=219.87 Aligned_cols=263 Identities=17% Similarity=0.127 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
.++++.++++.|.+.+ +.++||.+|..++++++- +++|+||+++..++..... ....|+++..++.+
T Consensus 53 ~~lE~~lA~l~g~~~~-~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~ 123 (377)
T TIGR01324 53 FALQDAMCELEGGAGC-YLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL 123 (377)
T ss_pred HHHHHHHHHHhCCCcE-EEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC
Confidence 3788999999998764 446677766654444431 3678999988766543322 34678998888652
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
+.++++++++ ++|++|++++|+ .+|.+. ||++|+++||++|+++++|.++. .+.+.+|.++|+|++++
T Consensus 124 -----~~e~l~~~i~---~~tklV~lesp~Np~g~~~-dl~~I~~la~~~g~~livD~t~a--~g~~~~pl~~gaDivv~ 192 (377)
T TIGR01324 124 -----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQ-DIPAIAKAARNPGIVIMIDNTWA--AGLLFKPLEHGVDISIQ 192 (377)
T ss_pred -----CHHHHHHhcC---CCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCc--cccccCccccCceEEEe
Confidence 3388999997 889999999995 677776 99999999999999999997764 45567899999999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~ 869 (1016)
|+||+++. | |+..+|++++++++...+-. .....|...+ |+ -+|+...|.+.|.
T Consensus 193 S~tK~l~G-~--~d~~gG~v~~~~~~~~~l~~-------------~~~~~G~~l~-p~---------~a~~~~rgl~tl~ 246 (377)
T TIGR01324 193 AGTKYLVG-H--SDIMIGTVVANARTWDQLRE-------------HSYLMGQMVD-AD---------DAYTTLRGLRTLG 246 (377)
T ss_pred cCceeccC-C--CCceEEEEEeCHHHHHHHHH-------------HHHHhCCCCC-HH---------HHHHHHhhhhhHH
Confidence 99999962 2 34457888888765433210 0011232222 21 3556667888999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeE------------EEEEecC-chhHHHHHHHHHHHHHHHHHHH
Q 001769 870 EASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHE------------FIVDLRG-LKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 870 ~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he------------~i~~~~~-~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
.+++++.+||..++++|+++ .+|.|||+++++.|+ +.|++++ .+++.++|+++|+.+ ..+.++
T Consensus 247 ~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~-~~~~sl 325 (377)
T TIGR01324 247 VRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLF-GLGYSW 325 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcc-eEeccC
Confidence 99999999999999999985 589999998888777 3566655 466789999999976 456665
Q ss_pred hcCCCCCCCCccccCCC
Q 001769 934 ENGKADIHNNVLKGAPH 950 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~ 950 (1016)
| +.++|...||
T Consensus 326 --G----~~~sl~~~~~ 336 (377)
T TIGR01324 326 --G----GYESLALCNQ 336 (377)
T ss_pred --C----CccceeecCC
Confidence 6 7899987555
No 68
>PRK02769 histidine decarboxylase; Provisional
Probab=99.86 E-value=1.9e-19 Score=207.60 Aligned_cols=285 Identities=16% Similarity=0.117 Sum_probs=200.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCcc--EEEccchHHHHHHHHH-HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001769 207 QGRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~an--asl~~~~Taa~eA~~~-a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v 283 (1016)
+++.+...+..+++|+|+|++..+ ..+++|||.++...+. ++.+ .++++|++++.+|+|+.+.++.+ ...+..+
T Consensus 61 ~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~--~~~~~ii~s~~~H~Sv~ka~~~l-g~~~~~V 137 (380)
T PRK02769 61 LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL--FPDGTLYYSKDTHYSVSKIARLL-RIKSRVI 137 (380)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh--CCCcEEEeCCCceehHHHHHHHc-CCCCcee
Confidence 345677788899999999997544 4778899876543332 2222 25789999999999999998653 1122222
Q ss_pred EE-----eCchhhhc-cCCC---EeEEEEEcC-CCCeeeccHHHHHHHHHhCC---cEEEEEeccccccCCC-------C
Q 001769 284 VV-----SDLKDIDY-KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANG---VKVVMATDLLALTILK-------P 343 (1016)
Q Consensus 284 ~~-----vd~~~L~~-l~~~---t~~V~v~~p-n~~G~i~dl~eI~~lah~~G---alviV~a~~~alg~l~-------~ 343 (1016)
.. +|+++|++ ++++ |.+|+++.+ |.+|.++|+++|+++||++| ++++|++ .++.+.+. -
T Consensus 138 ~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDa-A~gg~~~p~~~~~~~~ 216 (380)
T PRK02769 138 TSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA-ALSGMILPFVNNPPPF 216 (380)
T ss_pred ccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEe-cccceeecccCccccC
Confidence 22 23456666 6555 888998887 57899999999999999998 6999954 23333331 1
Q ss_pred CCcccceEEEecCccc-cccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 344 PGELGADIVVGSAQRF-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 344 pg~~GaDivvgs~k~l-g~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
....|+|.++.+++|| ++|+| +|++++++++.+.+... + .|.- ..+. -..||.|..+
T Consensus 217 d~~~~vDsis~s~HK~~~~P~g-----~G~l~~r~~~~~~~~~~-~----------~yl~---~~d~---t~~GSR~g~~ 274 (380)
T PRK02769 217 SFADGIDSIAISGHKFIGSPMP-----CGIVLAKKKYVERISVD-V----------DYIG---SRDQ---TISGSRNGHT 274 (380)
T ss_pred CccCCCCEEEECCcccCCCCCC-----cEEEEEehhhhhhcccC-c----------cccC---CCCC---CccCCCCcHH
Confidence 1223999999999555 43643 67899998877766321 0 0110 0000 1246666533
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeecc
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV 502 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~ 502 (1016)
.. ++-++ +.++|.+|++++.+++.++++||.++|++.| ++++..|...+|+|..+.. ++. +|+.+...
T Consensus 275 ~l---~lw~a--L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p~~~~v~f~~~~~-~~~-----~~w~l~~~ 342 (380)
T PRK02769 275 AL---LLWAA--IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNPNSITVVFPCPSE-RIW-----KKWHLATS 342 (380)
T ss_pred HH---HHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCceEEEEcCCCH-HHH-----hCeeEccc
Confidence 22 22233 4889999999999999999999999999987 9988777777888876642 221 68888764
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001769 503 DSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1016)
Q Consensus 503 ~~~~lris~te~~t~edid~ll~aL~~~ 530 (1016)
.+.++++++..+|++.||+|++.|...
T Consensus 343 -~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 343 -GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred -CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 458999999999999999999998643
No 69
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=3.2e-20 Score=217.48 Aligned_cols=280 Identities=17% Similarity=0.168 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.+ +.++||++|...++.++ . +++++||++...|+..... +...|++++++++
T Consensus 66 ~~~le~~lA~l~g~~~a-v~~sSGt~Al~~al~~l---l-----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEGGVGA-IATASGQAALHLAIATL---M-----GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 56889999999998874 66788877664444433 1 2578999998877643222 3458999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ |+++++++|+ ++|++|++++|+ .+|.+. ||++|+++||++|+++++|+++. .+.+..|.++|+|+++
T Consensus 137 ~-----d~~~l~~~i~---~~TklV~~e~~~np~g~v~-Di~~I~~la~~~gi~livD~t~a--~~~~~~pl~~GaD~vv 205 (433)
T PRK08134 137 G-----DIDGWRAAIR---PNTRLLFGETLGNPGLEVL-DIPTVAAIAHEAGVPLLVDSTFT--TPYLLRPFEHGADLVY 205 (433)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCcccCccc-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhcCCCEEE
Confidence 3 8999999998 899999999985 678887 99999999999999999998764 4445678899999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccc-------cccCCCCccccCCCCCCCC----------c---CCCCCCccCCccc
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHL-------APFLPSHPVVSTGGIPAPE----------K---SQPLGTIAAAPWG 848 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l-------~~~lpg~~~g~~g~~~~re----------~---~~~~g~i~s~~~G 848 (1016)
+|+||+++ || |.--+|+++....+ .+.+...+.++.|-....+ + ....|...+ +
T Consensus 206 ~S~tK~l~-g~--g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls-~-- 279 (433)
T PRK08134 206 HSATKFLG-GH--GTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLS-P-- 279 (433)
T ss_pred eccccccC-CC--CCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCC-H--
Confidence 99999985 33 22123444422211 1111111111111000000 0 011122211 1
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGL 912 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~ 912 (1016)
.-+|+...|.+.|..+.+++.+||..+++.|+++ -+|.|||..+++.|+. .|++++.
T Consensus 280 -------~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~ 352 (433)
T PRK08134 280 -------MNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGG 352 (433)
T ss_pred -------HHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCC
Confidence 2567888899999999999999999999999985 5899999988877763 3445445
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 913 KEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 913 ~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.+...+|+++|+.+. .+.++ | +.++|..+|.++.
T Consensus 353 ~~~~~~f~~~l~l~~-~~~sl--G----~~~sL~~~p~~~~ 386 (433)
T PRK08134 353 RAAGRKFIESLKLFS-HLANV--G----DARSLVIHPASTT 386 (433)
T ss_pred HHHHHHHHHhCCcce-ecccc--C----CCCceeeCCCccC
Confidence 567899999999873 45555 6 7899999998773
No 70
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=1.1e-20 Score=219.26 Aligned_cols=269 Identities=20% Similarity=0.248 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+. .+.+++|.++...++.++. +++++|+++...|+.... .+...|++++.++.
T Consensus 61 ~~~le~~lA~l~g~~~-av~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEA-AVATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 3478899999999987 4667788766544443331 357899999888864332 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+....|...|+|+++
T Consensus 132 ~-----d~e~l~~~i~---~~tklV~le~p~Np~G~v~-dl~~I~~la~~~gi~livD~a~a--~~~~~~~~~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK---DNTKIVYFETPANPTMKLI-DMERVCRDAHSQGVKVIVDNTFA--TPMLTNPVALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCc--hhccCCchhcCCCEEE
Confidence 3 8999999997 789999999995 578886 89999999999999999997753 3444567788999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
+|++|+|+.+ |+..+|+++.++++...+.. ... ....|...+ ++ -+|+...|.+.+
T Consensus 201 ~S~sK~lgg~---g~~~gG~v~~~~~li~~l~~--~~~---------~~~~g~~l~-~~---------~a~l~l~~L~tl 256 (391)
T TIGR01328 201 HSATKYIGGH---GDVVAGLICGKAELLQQIRM--VGI---------KDMTGSVIS-PF---------DAWLILRGLKTL 256 (391)
T ss_pred ccccccccCC---CCceEEEEEcCHHHHHHHHH--HHH---------HhCCCCCCC-cH---------HHHHHHhCcCcH
Confidence 9999999633 44557888887766554321 000 011122221 11 234555677888
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
..+.++..+||.+++++|+++ -.|.|||+++++.||+ .|++++..++..+|+++|+.| ..+.++
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s~ 335 (391)
T TIGR01328 257 NIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLI-RLAVSL 335 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcc-eEecCC
Confidence 999999999999999999974 4799999999999973 445555567789999999977 345555
Q ss_pred hcCCCCCCCCccccCCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~~ 953 (1016)
| +.++|..+|.++.
T Consensus 336 --G----~~~sl~~~~~~~~ 349 (391)
T TIGR01328 336 --G----DAETLIQHPASMT 349 (391)
T ss_pred --C----CCcccCcCCCccc
Confidence 6 7899999998773
No 71
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.8e-20 Score=219.33 Aligned_cols=280 Identities=19% Similarity=0.188 Sum_probs=198.6
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~d 710 (1016)
.++++.++++.|.+.+ +.+++|..|..++++++. .++++||++...|+.... .+...|++++.++ +
T Consensus 72 ~~Le~~lA~l~g~~~a-v~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 72 DVVEQRIAALEGGVAA-LLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred HHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 4788999999998874 667788776655554432 357899998887764332 2345789998886 3
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
. .|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++. .+.+..|.++|+|++++
T Consensus 142 ~---~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~-Dl~~I~~la~~~gi~liVD~t~a--~~~~~~pl~~GaDivv~ 212 (436)
T PRK07812 142 P---DDLDAWRAAVR---PNTKAFFAETISNPQIDVL-DIPGVAEVAHEAGVPLIVDNTIA--TPYLIRPLEHGADIVVH 212 (436)
T ss_pred C---CCHHHHHHhCC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhcCCCEEEE
Confidence 2 38999999998 899999999984 689887 99999999999999999997754 44556788999999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccCCCCccccC--CCCCC---------------C-CcCCCCCCccCCccchhh
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST--GGIPA---------------P-EKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~--g~~~~---------------r-e~~~~~g~i~s~~~G~a~ 851 (1016)
|+||+++ +| |+--+|.++.+..+.-.-+....-.+ ..+.. + +..+.+|.+.+ |+
T Consensus 213 S~tK~lg-g~--G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~-p~---- 284 (436)
T PRK07812 213 SATKYLG-GH--GTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAIS-PF---- 284 (436)
T ss_pred ecccccC-CC--CCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCC-HH----
Confidence 9999996 33 33334555433321100000000000 00000 0 00112233322 22
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCchhH
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGLKEE 915 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~~~~ 915 (1016)
-+|+...|.++|..+++++.+||..|+++|+++ -+|.|||+++++.|+. .|++++..++
T Consensus 285 -----~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~ 359 (436)
T PRK07812 285 -----NAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEA 359 (436)
T ss_pred -----HHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHH
Confidence 577889999999999999999999999999985 5899999988888773 3444455567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 916 LDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 916 ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.++|+|+|+.| ..+.++ | +.++|..+|.++.
T Consensus 360 ~~~f~~~l~l~-~~a~sl--G----~~~sLi~~p~~~~ 390 (436)
T PRK07812 360 GKAFVNALTLH-SHVANI--G----DVRSLVIHPASTT 390 (436)
T ss_pred HHHHHHhCCcc-eEeccc--C----CCcceeeCCCCCC
Confidence 99999999987 355565 6 7899999999873
No 72
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.86 E-value=1.8e-19 Score=210.02 Aligned_cols=323 Identities=14% Similarity=0.109 Sum_probs=225.1
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCc-cEEEccchHHHHHHHHHHh
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCN 248 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~a-nasl~~~~Taa~eA~~~a~ 248 (1016)
+.+.| |..+|..+.+++.. +. ..+ .+.+..+.+.+.++.+++++|.+.. .+.+..++|+++++++..+
T Consensus 12 l~~pG--P~~~~~~V~~a~~~-~~--~~~------~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPG--PVNIPERVLRAMNR-PN--EDH------RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCC--CCCCCHHHHHHhcC-CC--CCC------CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 44666 67788888755543 21 222 1334566788888999999999754 4566678888877776654
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC----CEeEEEEEcC-CCCeeecc
Q 001769 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG----DVCGVLVQYP-GTEGEVLD 314 (1016)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~----~t~~V~v~~p-n~~G~i~d 314 (1016)
+ ++||+|++++..|++.. |...++..|++++.++. +++++ +++ ++++|+++++ |.+|.+.|
T Consensus 81 -~--~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 81 -L--SPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -C--CCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 3 38999999999998764 33445667888887653 34554 543 7899988875 78999999
Q ss_pred HHHHHHH--HHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEee
Q 001769 315 YGDFIKN--AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1016)
Q Consensus 315 l~eI~~l--ah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~ 390 (1016)
+++|+++ ||++|++++||+ ..++|.+. +..+||+|++++++ |+|++| |++||+++++++++++...-.
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~-v~s~g~~~id~~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~~-- 227 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDG-VSSIGALDFRMDEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAKS-- 227 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEc-ccccCCccccccccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCCC--
Confidence 9999999 999999999943 44555543 34679999999999 667554 458899999988776632100
Q ss_pred eecCCCCcceeeeccc--ccccc-cccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCe
Q 001769 391 SIDSSGKPALRVAMQT--REQHI-RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 391 s~d~~g~~~~~l~lqt--reqhi-RRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~ 467 (1016)
..+.+.+.. +-... .+...|+|+ ..++++.+++ .++..+|++++.++..++++++++.|+++| +
T Consensus 228 -------~~~~~~~~~~~~~~~~g~~~~~Tp~~---~~~~al~~al--~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~ 294 (401)
T PLN02409 228 -------PRVFFDWADYLKFYKLGTYWPYTPSI---QLLYGLRAAL--DLIFEEGLENVIARHARLGEATRLAVEAWG-L 294 (401)
T ss_pred -------CCeecCHHHHHHHHhcCCCCCCCccH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 001111100 00000 112346665 5566766666 555678999999999999999999999987 8
Q ss_pred EEcCC--C-CccE-EEEecCC---HHHHHHHHH-HcCceeec----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 468 EVQGL--P-FFDT-VKVKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 468 ~l~~~--~-~~~~-v~i~~~~---~~~v~~~L~-~~GI~~~~----~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+++.+ . ...+ +.+..+. +.++.+.|. ++||.+.. ..+..+||+.+-+++.+|+..++++|+.
T Consensus 295 ~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 295 KLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEM 368 (401)
T ss_pred eeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 88742 1 2333 3355542 678888876 56998753 2357899999999999999999999974
No 73
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.85 E-value=1.3e-20 Score=219.07 Aligned_cols=267 Identities=16% Similarity=0.220 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.+.+ .++|..+..+++++.. +++++|+++...|+.+... +...|++++.++.
T Consensus 67 ~~~Le~~lA~l~G~~~~~~-~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 137 (398)
T PRK07504 67 VDMFEKRMCALEGAEDARA-TASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG 137 (398)
T ss_pred HHHHHHHHHHHhCCCeeeE-ecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC
Confidence 3578899999999987644 5677665543333221 3578999998877654332 3467999998863
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+....|.++|+|+++
T Consensus 138 -----~d~e~l~~ai~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~gi~lvvD~a~a--~~~~~~~~~~gaDivv 206 (398)
T PRK07504 138 -----LDLDNWEKAVR---PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAGAKLVVDNVFA--TPLFQKPLELGAHIVV 206 (398)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCcEec-CHHHHHHHHHHcCCEEEEECCcc--ccccCCchhhCCCEEE
Confidence 79999999997 899999999996 578887 99999999999999999997764 3444678889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEccccccc-CCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPF-LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~-lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+|+.+ |...+|+++.++++... +... ....|...+ ++ .+++...|.+.
T Consensus 207 ~S~sK~l~g~---g~~~GG~vv~~~~~i~~~~~~~-------------~~~~g~~~s-~~---------~A~~~l~~L~t 260 (398)
T PRK07504 207 YSATKHIDGQ---GRCLGGVVLSDKAWIEEHLQDY-------------FRHTGPSLS-PF---------NAWTLLKGLET 260 (398)
T ss_pred eeccccccCC---ccceEEEEEeCcHHHHHHHHHH-------------HHHhCCCCC-HH---------HHHHHHhccch
Confidence 9999999532 22234677776654321 1100 001122111 11 34556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeE------------EEEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHE------------FIVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he------------~i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+.+++.+||..++++|+++ .+|.|||+.+++.|+ +.|++++..++..+|++.|+.| .-+.+
T Consensus 261 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~-~~~~s 339 (398)
T PRK07504 261 LPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIV-RISNN 339 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcc-eeccc
Confidence 9999999999999999999974 589999999998886 3456655567889999999988 45566
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 340 l--G----~~~sl~~~p~~~~ 354 (398)
T PRK07504 340 L--G----DAKSLITHPATTT 354 (398)
T ss_pred C--C----CCCeeeeCCCCCC
Confidence 5 6 7899999998874
No 74
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=3.8e-20 Score=217.00 Aligned_cols=278 Identities=18% Similarity=0.193 Sum_probs=200.4
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~d 710 (1016)
.++++.++++.|.+. .+..++|.+|+.+++.++. +++++||++...|+.... .+...|++++.++.
T Consensus 66 ~~le~~lA~l~g~~~-al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (427)
T PRK05994 66 AVLEERVAALEGGTA-ALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA- 135 (427)
T ss_pred HHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence 478899999999886 5677888877765554432 357899998887764332 25678999999986
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|++++
T Consensus 136 ----~d~~~l~~ai~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~a~a--~~~~~~pl~~gaDivv~ 205 (427)
T PRK05994 136 ----DDPASFERAIT---PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAGLPLIVDNTLA--SPYLIRPIEHGADIVVH 205 (427)
T ss_pred ----CCHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCcc--ccccCCccccCCcEEEE
Confidence 48999999997 789999999984 678887 99999999999999999997764 34456788899999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccCCCC----ccc---cCCC-CCC---C-------C---cCCCCCCccCCccc
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH----PVV---STGG-IPA---P-------E---KSQPLGTIAAAPWG 848 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~----~~g---~~g~-~~~---r-------e---~~~~~g~i~s~~~G 848 (1016)
|+||+++ +| |++-+|+++....+ .+.+.. +.. ..|. +.. . . ..+..|...+ ++
T Consensus 206 S~tK~lg-g~--~~~~gG~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~- 279 (427)
T PRK05994 206 SLTKFLG-GH--GNSMGGIIVDGGTF-DWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS-PF- 279 (427)
T ss_pred cCccccC-CC--CCcEEEEEEeCCcc-ccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC-HH-
Confidence 9999996 33 45556666533221 111000 000 0000 000 0 0 0111232222 11
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGL 912 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~ 912 (1016)
-+|+...|.+.|..+.+++.+||.++++.|+++ -+|.|||+++++.|++ .|++++.
T Consensus 280 --------~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~ 351 (427)
T PRK05994 280 --------NAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGG 351 (427)
T ss_pred --------HHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCC
Confidence 477888999999999999999999999999985 5789999988888774 3444445
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 913 KEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 913 ~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.++.++|++.|+.| ..+.++ | +.++|..+|.++.
T Consensus 352 ~~~~~~~~~~l~l~-~~~~s~--G----~~~sl~~~p~~~~ 385 (427)
T PRK05994 352 YEAGVKLVSSLKLF-SHLANI--G----DTRSLVIHPASTT 385 (427)
T ss_pred HHHHHHHHHhCCcc-eecccc--C----CCcceeeCCCCCC
Confidence 56889999999987 345565 6 7899999998873
No 75
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.85 E-value=1.5e-20 Score=218.19 Aligned_cols=266 Identities=21% Similarity=0.262 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.+ +.+++|.+|..++++++. +++++||++...|+.... .+...|++++.+++
T Consensus 63 ~~~le~~la~l~g~~~~-v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEGAEAC-VATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 45789999999998864 556777776654444431 357899999888865433 34578999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.+. +.+....|.++|+|+++
T Consensus 134 ~-----d~~~l~~~i~---~~tklV~ie~p~NptG~v~-dl~~I~~la~~~gi~livD~t~--~~~~~~~pl~~g~Divv 202 (390)
T PRK08133 134 T-----DLDAWRAAVR---PNTKLFFLETPSNPLTELA-DIAALAEIAHAAGALLVVDNCF--CTPALQQPLKLGADVVI 202 (390)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCC--cccccCCchhhCCcEEE
Confidence 3 8999999997 899999999995 689987 9999999999999999999764 34445678889999999
Q ss_pred eCccccccCCCCCCCCe-EEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPG-MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg-~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++. +|.. +|+++.++++...+... ....|...+ ++ .+++...|.+.
T Consensus 203 ~S~sK~~~g----~g~~~GG~vv~~~~~~~~~~~~-------------~~~~g~~~~-~~---------~a~~~l~gl~t 255 (390)
T PRK08133 203 HSATKYLDG----QGRVLGGAVVGSKELMEEVFGF-------------LRTAGPTLS-PF---------NAWVFLKGLET 255 (390)
T ss_pred eecceeecC----CcceEeEEEEcCHHHHHHHHHH-------------HHHhCCCCC-HH---------HHHHHHcccch
Confidence 999999952 2333 47777776544322100 001122111 11 24455568889
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+.+++.+|+.+++++|+++ ..|.|||+.+++.|+. .|++++..++..+|+++|+.| ..+.+
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~-~~~~s 334 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLI-SITAN 334 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcc-eEecc
Confidence 9999999999999999999974 5899999988888883 345555566789999999987 45556
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 335 l--G----~~~sl~~~p~~~~ 349 (390)
T PRK08133 335 L--G----DTKTTITHPATTT 349 (390)
T ss_pred C--C----CcceeeecCCCCC
Confidence 5 5 6899999998873
No 76
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.85 E-value=9.8e-21 Score=199.59 Aligned_cols=309 Identities=15% Similarity=0.146 Sum_probs=227.4
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|.+.+||+|...+|.++.+..+ ++-+.+. +|-..+...|+-..+.+++..||++-|-|. +.+|+++-.++.+
T Consensus 71 nFcaNnYLGLsshPeii~a~~~-aleeyGa-----GlssvrfIcGtq~iHk~LE~kiAqfh~rED--~ilypscfdANag 142 (417)
T KOG1359|consen 71 NFCANNYLGLSSHPEIINAGQK-ALEEYGA-----GLSSVRFICGTQDIHKLLESKIAQFHGRED--TILYPSCFDANAG 142 (417)
T ss_pred eecccccccccCChHHHHHHHH-HHHHhCC-----CccceeEEecchHHHHHHHHHHHHHhCCCc--eEEeccccccchH
Confidence 5677899999999999988875 4544332 344556788999999999999999999988 7777777666555
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-c--C-CCEeEEEEEcC--CCCeeeccHHH
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K--S-GDVCGVLVQYP--GTEGEVLDYGD 317 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l--~-~~t~~V~v~~p--n~~G~i~dl~e 317 (1016)
++-|+. .+.|-|+.++.+|.|+++.++. ++ +..++|+-+++. + . +--.-++++.. ++.|.+.|+++
T Consensus 143 ~feail---~pedAvfSDeLNhASIIdGirL-ck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 143 AFEAIL---TPEDAVFSDELNHASIIDGIRL-CK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred HHHHhc---ChhhhhhccccccchhhhhhHH-Hh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHH
Confidence 555542 3789999999999999999865 55 344566666654 2 1 11234566765 79999999999
Q ss_pred HHHHHHhCCcEEEEEeccccccCCCCCC-----ccc----ceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCce
Q 001769 318 FIKNAHANGVKVVMATDLLALTILKPPG-----ELG----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1016)
Q Consensus 318 I~~lah~~GalviV~a~~~alg~l~~pg-----~~G----aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgri 387 (1016)
|++++++||+++++ ++.++.|++...| ++| +||+.++. |.+|+ -+.||..+.++++..+
T Consensus 215 i~~La~kYgaLlfi-DecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg------a~GGyttgp~~li~ll---- 283 (417)
T KOG1359|consen 215 ISQLAKKYGALLFI-DECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG------ASGGYTTGPKPLISLL---- 283 (417)
T ss_pred HHHHHHhcCcEEEE-eecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC------CCCCCccCChhHHHHH----
Confidence 99999999999999 4667777765543 234 79999886 88864 3447888777766554
Q ss_pred EeeeecCCCCcceeeecccccccccccccCCccchhhHHHH---HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001769 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA---NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1016)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a---~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~ 464 (1016)
|.++++++++++..++ ..+.+|...+.. .++..+...+++++++..+..
T Consensus 284 -------------------------rqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 284 -------------------------RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred -------------------------HhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 3455667777655543 344445555543 456677788999999999988
Q ss_pred CCeEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceee----c-cc--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 465 GTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLR----V-VD--SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 465 G~~~l~~~-~~~~~v~i~~~~-~~~v~~~L~~~GI~~~----~-~~--~~~lris~te~~t~edid~ll~aL~ 528 (1016)
| |++.+. ...-++.+.... +.+.++.|.++||++- + ++ ..++|+.++..||+||||+++++|.
T Consensus 336 G-ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 336 G-FTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred C-ceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence 8 998753 233356665544 8899999999999872 2 23 3568999999999999999999996
No 77
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.85 E-value=1.7e-19 Score=206.38 Aligned_cols=315 Identities=16% Similarity=0.095 Sum_probs=215.7
Q ss_pred CCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCcc-EEEccchHHHHHHHHHHhccccCCCC
Q 001769 178 THVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCNNIQKGKKK 256 (1016)
Q Consensus 178 ~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~an-asl~~~~Taa~eA~~~a~~~~~~~gd 256 (1016)
..+|+.+.+++.+... .+ + +.+..+.+.++++.+++++|.+..+ +.++.++|.++..++.++. ++|+
T Consensus 8 ~~~~~~v~~a~~~~~~---~~--~----~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~---~~g~ 75 (356)
T cd06451 8 SNVPPRVLKAMNRPML---GH--R----SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL---EPGD 75 (356)
T ss_pred cCCCHHHHHHhCCCcc---CC--C----CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC---CCCC
Confidence 3577777666643221 11 1 1234566888999999999996544 5567777887766666652 2789
Q ss_pred EEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhC
Q 001769 257 TFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHAN 325 (1016)
Q Consensus 257 ~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~-~t~~V~v~~p-n~~G~i~dl~eI~~lah~~ 325 (1016)
+|+++...|++.. +...++..|.+++.++. +++++ +++ ++++|++++| |.+|.+.|+++|+++||++
T Consensus 76 ~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~ 153 (356)
T cd06451 76 KVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKH 153 (356)
T ss_pred EEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhc
Confidence 9999998887732 12223445777776643 34555 665 8899999887 6799999999999999999
Q ss_pred CcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCC--ceEeeeecCCCCccee
Q 001769 326 GVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG--RIVGVSIDSSGKPALR 401 (1016)
Q Consensus 326 GalviV~a~~~alg~l-~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpg--rivG~s~d~~g~~~~~ 401 (1016)
|+++++++ .+++|.. .+..++|+|++++++ |+|++|. +.|++++++++++.+.. ...+ +.
T Consensus 154 ~~~li~D~-~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~G~l~~~~~~~~~~~~~~~~~~----------~~ 217 (356)
T cd06451 154 DALLIVDA-VSSLGGEPFRMDEWGVDVAYTGSQKALGAPP-----GLGPIAFSERALERIKKKTKPKG----------FY 217 (356)
T ss_pred CCEEEEee-ehhccCccccccccCccEEEecCchhccCCC-----CcceeEECHHHHHHHHhcCCCCc----------ee
Confidence 99999943 4555543 245678999999998 7776552 46899999988776631 1111 11
Q ss_pred eecccccccc--c-ccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCcc
Q 001769 402 VAMQTREQHI--R-RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFD 476 (1016)
Q Consensus 402 l~lqtreqhi--R-RekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~ 476 (1016)
+.++...+.. + .+.+|.|+ ..+.++.+++ .++...|++++.++..++++++++.|.++| +++..+ ....
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~---~~~~a~~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~ 291 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPV---NLLYALREAL--DLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRSP 291 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCC
Confidence 2211111111 1 12333333 3344555555 555667999999999999999999999987 888642 2223
Q ss_pred EE-EEecC-C--HHHHHHHHHHc-Cceeecc----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 477 TV-KVKCA-D--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 477 ~v-~i~~~-~--~~~v~~~L~~~-GI~~~~~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+ .+..+ + ..++++.|.++ ||.+... .++.+|+|++.++|++|+++++++|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~ 352 (356)
T cd06451 292 TVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALE 352 (356)
T ss_pred ceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 33 23443 2 78999999998 9988642 24689999999999999999999986
No 78
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.7e-20 Score=217.96 Aligned_cols=267 Identities=17% Similarity=0.176 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~ 709 (1016)
..+++++++++.|.+.+ +.+++|.++...++.++. .++++|+++...|+.... .+...|++++.++.
T Consensus 66 ~~~le~~lA~l~g~~~~-i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 66 VQAFEEKVRILEGAEAA-TAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 45789999999998764 667788766544433331 357899999887764322 24568999988775
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++|+ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|..+|+|+++
T Consensus 137 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~gi~livD~t~a--~~~~~~~l~~~~Divv 205 (398)
T PRK08249 137 -----GDHEQIEAEIA---KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVGALVVVDNTFA--TPINQNPLALGADLVI 205 (398)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCcC--ccccCCchhhCCCEEe
Confidence 69999999998 789999999995 678887 99999999999999999997753 3334567778999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
+|+||+++ +| |+..+|+++.++++.+.+.. . ....|...+ ++ .+|+...|.+.|
T Consensus 206 ~S~sK~l~-g~--~~~~gG~vv~~~~l~~~l~~--~-----------~~~~g~~~s-~~---------~a~l~l~~l~tL 259 (398)
T PRK08249 206 HSATKFLS-GH--ADALGGVVCGSKELMEQVYH--Y-----------REINGATMD-PM---------SAYLILRGMKTL 259 (398)
T ss_pred ccCceecC-CC--CCceEEEEECCHHHHHHHHH--H-----------HHhcCCCCC-HH---------HHHHHHhCcchH
Confidence 99999996 22 22235777776665544311 0 011121111 11 345566788889
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
..+.+++.+||..++++|+++ -+|.|||+++++.|+. .|++++..+...+|+++|+.+ ..+.++
T Consensus 260 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~-~~~~s~ 338 (398)
T PRK08249 260 KLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYA-HRAANL 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcc-eEccCC
Confidence 999999999999999999974 5899999999998884 344555556789999999987 456665
Q ss_pred hcCCCCCCCCccccCCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~~ 953 (1016)
| +.++|..+|.++.
T Consensus 339 --G----~~~sl~~~~~~~~ 352 (398)
T PRK08249 339 --G----AVETIYGPARTTS 352 (398)
T ss_pred --C----CCCceeeCCcccc
Confidence 6 7899999998874
No 79
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=2.3e-19 Score=207.61 Aligned_cols=298 Identities=13% Similarity=0.032 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHcCCCC-ccEEEcc-chHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEEe
Q 001769 210 LESLLNFQTMIADLTGLPM-SNASLLD-EGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVVS 286 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~~~-anasl~~-~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi-~v~~v 286 (1016)
.+.+.+.++.+++++|.+. .++.++. ++|.++++++.++ +. .+++.|+ ...+|++....+ .++..|+ +++.+
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~-~~~~~vi-~~g~f~~~~~~~--~~~~~g~~~v~~~ 121 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG-ARRVDHL-AWESFGSKWATD--VVKQLKLEDPRVL 121 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC-CCcceEE-EeCHHHHHHHHH--HHhhcCCCCceEe
Confidence 4677888999999999854 3577775 8999999988776 32 1244444 468999865431 1244677 77776
Q ss_pred Cch-----hhhccCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-cc
Q 001769 287 DLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QR 358 (1016)
Q Consensus 287 d~~-----~L~~l~~~t~~V~v~~-pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~-k~ 358 (1016)
+.+ ++++++. ++.|.+++ .|.+|.+.|+++|++ |++|++++||+ ..++|..+ +..+ +|++++++ |+
T Consensus 122 ~~~~g~~~d~~~i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa-~qs~G~~pidv~~--iD~~~~s~~K~ 195 (378)
T PRK03080 122 EADYGSLPDLSAVDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA-TSAAFALPLDWSK--LDVYTFSWQKV 195 (378)
T ss_pred ccCCCCCCCHhhcCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec-ccccccCCCCHHH--CcEEEEehhhh
Confidence 542 1222333 45577765 688999999999999 89999999943 34565543 2233 79999999 55
Q ss_pred ccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHh
Q 001769 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 438 (1016)
Q Consensus 359 lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~ 438 (1016)
|++| ||+||+++++++++++.+...|+.. ...+.+..+.+....+++.+|.|.....+++++.+++ .++
T Consensus 196 l~~P-----~G~g~l~v~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al--~~l 264 (378)
T PRK03080 196 LGGE-----GGHGMAILSPRAVERLESYTPARPI----PKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQL--DWA 264 (378)
T ss_pred CCCC-----CceEEEEECHHHHHhhhcccCCCCC----chhheeccchHHhhhhhcCCcccCchHHHHHHHHHHH--HHH
Confidence 5433 5789999999999888766655421 0112221110111124566777776667777777776 666
Q ss_pred Ccc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-C--Cc-cEEEEecCC-----HHHHHHHHHHcCceeec--c--cC
Q 001769 439 GPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P--FF-DTVKVKCAD-----AHAIASAAYKIEMNLRV--V--DS 504 (1016)
Q Consensus 439 g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~--~~-~~v~i~~~~-----~~~v~~~L~~~GI~~~~--~--~~ 504 (1016)
..+ |++++.+|..+++++++++|+++|+++++.. + .. ..++|+.++ ..++...|.++||.++. . .+
T Consensus 265 ~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~~ 344 (378)
T PRK03080 265 NSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDAP 344 (378)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccCCC
Confidence 676 8999999999999999999999975666531 1 12 246666654 34567777777887753 1 24
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 505 NTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 505 ~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+.+|+|++.++|++||++++++|..
T Consensus 345 ~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 345 NGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CcEEEecCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999999963
No 80
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.85 E-value=2.6e-20 Score=216.86 Aligned_cols=267 Identities=20% Similarity=0.215 Sum_probs=200.3
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
.++++.++++.|.+. .+.+++|..+..++++++. +++++|+++...|+..... +...|++++.++.
T Consensus 67 ~~Le~~iA~~~g~~~-~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~- 136 (400)
T PRK06234 67 TEVENKLALLEGGEA-AVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT- 136 (400)
T ss_pred HHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC-
Confidence 478899999999875 4677888776644443331 3578999998888754432 4678999999986
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHc--CcEEEEEccccccccCcCCCCccCCcEE
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~--g~lv~vDga~~~a~~~l~~pg~~GaDi~ 787 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++ |+++++|.+. +.+.+..|..+|+|++
T Consensus 137 ----~d~e~l~~~i~---~~tklI~iesP~NPtG~v~-dl~~I~~la~~~~~~i~livDea~--~~~~~~~~l~~g~Div 206 (400)
T PRK06234 137 ----SNLEEVRNALK---ANTKVVYLETPANPTLKVT-DIKAISNIAHENNKECLVFVDNTF--CTPYIQRPLQLGADVV 206 (400)
T ss_pred ----CCHHHHHHHhc---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhcCCCCEEEEECCC--CchhcCCchhhCCcEE
Confidence 38999999998 789999999995 688887 899999999997 9999999764 3444457778899999
Q ss_pred EeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
++|++|+|+.+ |...+|++++++++.+.+.. .+. ...+|...+ ++ .+++...|.+.
T Consensus 207 v~S~sK~l~g~---g~~~gG~v~~~~~~~~~l~~--~~~---------~~~~g~~l~-p~---------~a~l~~~~l~t 262 (400)
T PRK06234 207 VHSATKYLNGH---GDVIAGFVVGKEEFINQVKL--FGI---------KDMTGSVIG-PF---------EAFLIIRGMKT 262 (400)
T ss_pred EeeccccccCC---CCceeEEEEecHHHHHHHHH--HHH---------HHhcCCCCC-HH---------HHHHHHhccCc
Confidence 99999999622 33346999998876554411 000 011222221 22 34566778888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
+..+.+++.+||.+++++|+++ -+|.|||+.+++.|++ .|++++..+..++|+++|+.+ ....+
T Consensus 263 l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~-~~~~s 341 (400)
T PRK06234 263 LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLA-TLAVS 341 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcc-eEecc
Confidence 8999999999999999999974 5899999988887773 455655567789999999976 44566
Q ss_pred HhcCCCCCCCCccccCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~ 952 (1016)
+ | +.++|..+|.++
T Consensus 342 ~--G----~~~sl~~~p~~~ 355 (400)
T PRK06234 342 L--G----DAETLIQHPASM 355 (400)
T ss_pred C--C----CCCceecCCccC
Confidence 5 6 789999999877
No 81
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=2.8e-20 Score=215.98 Aligned_cols=278 Identities=15% Similarity=0.124 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH---HHHhCCcEEEEEcCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~---~a~~~G~~vv~v~~d 710 (1016)
..++++.++++.|.+.. +.+++|.+|..++++++. +++++||+++..|+.+.. .+...|++++.++.
T Consensus 49 ~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~- 118 (397)
T PRK05939 49 TAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA- 118 (397)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-
Confidence 44788999999998764 666778766654444431 357899999988876543 35568999999987
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++. .+...+|.++|+|+++.
T Consensus 119 ----~d~e~l~~~l~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~t~a--~~~~~~~~~~gaDivv~ 188 (397)
T PRK05939 119 ----TDVQNVAAAIR---PNTRMVFVETIANPGTQVA-DLAGIGALCRERGLLYVVDNTMT--SPWLFRPKDVGASLVIN 188 (397)
T ss_pred ----CCHHHHHHhCC---CCCeEEEEECCCCCCCCHH-hHHHHHHHHHHcCCEEEEECCcc--cccccCccccCCEEEEe
Confidence 48999999998 89999999998 4688886 99999999999999999997653 34456788899999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccC-CCCcccc----CC-CC---CCC-CcCCCCCCccCCccchhhHHHHHHHH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVS----TG-GI---PAP-EKSQPLGTIAAAPWGSALILPISYTY 859 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~l-pg~~~g~----~g-~~---~~r-e~~~~~g~i~s~~~G~a~~~~~a~a~ 859 (1016)
|+||+|+. | |..+|.+++.....+.. ...+... .. .+ ..+ ...+.+|.+.+ |+ -+|
T Consensus 189 S~sK~~~g-~---g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-p~---------~a~ 254 (397)
T PRK05939 189 SLSKYIAG-H---GNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLS-SE---------AAH 254 (397)
T ss_pred cCeecccC-C---CCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCC-HH---------HHH
Confidence 99999962 3 33444444432211100 0000000 00 00 000 00012343332 22 578
Q ss_pred HHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHH
Q 001769 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 860 l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~ 924 (1016)
+...|.++|..+++++.+||..++++|+++ -+|.|||+.+++.|++ .|++++. ++..+|+++|+
T Consensus 255 l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~-~~~~~f~~~l~ 333 (397)
T PRK05939 255 RIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG-IDCFDFLNRLK 333 (397)
T ss_pred HHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH-HHHHHHHHhCC
Confidence 889999999999999999999999999975 5899999998988883 3455533 57889999998
Q ss_pred HHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 925 SIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 925 ~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.+ ....++ | +.++|..+|.++.
T Consensus 334 l~-~~~~s~--G----~~~sl~~~p~~~~ 355 (397)
T PRK05939 334 LV-IKATHL--G----DTRTLVIPVAPTI 355 (397)
T ss_pred cc-eEccCC--C----CCCeeeecCcccc
Confidence 76 344554 6 7899999998773
No 82
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=2.5e-20 Score=219.04 Aligned_cols=267 Identities=18% Similarity=0.197 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEc
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~ 708 (1016)
...+++++++++.|.+.+ +.+++|.++. ++++.+ . +++|+||+++..|+.+... +...|++++.++
T Consensus 134 t~~aLE~~lA~leg~e~a-i~~~SG~aAi-~~il~l---l-----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd 203 (464)
T PLN02509 134 TRDALESLLAKLDKADRA-FCFTSGMAAL-SAVTHL---I-----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN 203 (464)
T ss_pred HHHHHHHHHHHHhCCCEE-EEeCcHHHHH-HHHHHH---h-----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeC
Confidence 356888999999987754 5567776543 222221 1 3678999999888765533 456899999887
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEE
Q 001769 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~ 787 (1016)
. .|+++++++++ ++|++|++++|+ .+|.+. ||++|+++||++|+++++|.++ +.+.+..|..+|+|++
T Consensus 204 ~-----~d~e~l~~ai~---~~TklV~lesPsNPtG~i~-Dl~~I~~lAk~~g~~lIVD~A~--a~~~~~~pl~~gaDiv 272 (464)
T PLN02509 204 T-----TNLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKIAEMAHAQGALVLVDNSI--MSPVLSRPLELGADIV 272 (464)
T ss_pred C-----CCHHHHHHhCC---cCCeEEEEECCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCc--cccccCChhhcCCcEE
Confidence 5 58999999997 899999999995 678886 9999999999999999999775 3444567888999999
Q ss_pred EeCccccccCCCCCCCCeEEEEEEccc-ccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~~~-l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
++|+||+++.| |+..+|+++++++ +...+. .. .+..|...+ ++ -+|+...|.+
T Consensus 273 v~S~tK~l~G~---gdv~gG~v~~~~~~l~~~~~--~~-----------~~~~g~~l~-p~---------~A~l~lr~L~ 326 (464)
T PLN02509 273 MHSATKFIAGH---SDVMAGVLAVKGEKLAKEVY--FL-----------QNSEGSGLA-PF---------DCWLCLRGIK 326 (464)
T ss_pred EecCcccccCC---CccceeEEEeccHHHHHHHH--HH-----------HHhcCCCcC-HH---------HHHHHHhhhh
Confidence 99999999622 4445788888653 222110 00 011121111 22 3667777888
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE----------EEEec-CchhHHHHHHHHHHHHHHHHHH
Q 001769 867 GLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF----------IVDLR-GLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~----------i~~~~-~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
.|..+.+++.+||.++++.|+++ -+|.|||+++++.|++ ++++. +..+..++|+++|+.| ..+.+
T Consensus 327 tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~-~~a~s 405 (464)
T PLN02509 327 TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYF-SIAVS 405 (464)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcc-eEccc
Confidence 99999999999999999999985 5899999999998884 33322 3456789999999977 46666
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 406 l--G----~~~SLi~~p~~~s 420 (464)
T PLN02509 406 F--G----SVKSLISMPCFMS 420 (464)
T ss_pred C--C----CCCceeeCCcccc
Confidence 6 6 7899999999873
No 83
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=3.6e-20 Score=215.64 Aligned_cols=267 Identities=17% Similarity=0.160 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc-cH---HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NP---ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~-~~---~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+. .+.+++|..+..++++++. +++++|+++...|+. +. ..+...|++++.++.
T Consensus 72 ~~~le~~lA~l~g~~~-al~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEGAEA-CFATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhCCCc-EEEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 3578899999999875 4667788776655444431 357899999877754 33 235578999999986
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++ +.+....|.++|+|+++
T Consensus 143 -----~d~~~l~~ai~---~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g~~vivD~a~--a~~~~~~~~~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS---VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAGAKVVLDNVF--ATPLLQRGLPLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCC--CccccCChhhcCCcEEE
Confidence 48999999998 789999999995 678886 9999999999999999999765 44555678889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccc-cCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~-~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+|+. | |+.-+|+++++++... .+.. . ...+|...+ ++ -+|+...|.+.
T Consensus 212 ~S~tK~l~g-~--g~~~gG~v~~~~~~~~~~l~~-~------------~~~~g~~~s-~~---------~a~l~l~~L~t 265 (403)
T PRK07810 212 YSGTKHIDG-Q--GRVLGGAILGDREYIDGPVQK-L------------MRHTGPALS-AF---------NAWVLLKGLET 265 (403)
T ss_pred ccCCceecC-C--cCceeEEEEeChHHHHHHHHH-H------------HHHhCCCCC-HH---------HHHHHHhccCc
Confidence 999999962 2 2233588888765332 1110 0 011222221 21 35566778899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecC----chhHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRG----LKEELDRYCDALISIRE 928 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~----~~~~ld~f~~~l~~i~~ 928 (1016)
|..+.+++.+||.+++++|+++ -+|.|||+++++.|++ .+++++ ..++..+|+++|+.|.
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~- 344 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVID- 344 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceE-
Confidence 9999999999999999999974 5899999999887773 345554 4567899999999873
Q ss_pred HHHHHhcCCCCCCCCccccCCCCCC
Q 001769 929 EIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 929 e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.+.++ | ..++|..+|.++.
T Consensus 345 ~~~sl--G----~~~sl~~~p~~~~ 363 (403)
T PRK07810 345 ISNNL--G----DAKSLITHPATTT 363 (403)
T ss_pred EeccC--C----CCcceeeCCCccc
Confidence 45565 5 7899999888763
No 84
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.85 E-value=5.9e-19 Score=203.15 Aligned_cols=301 Identities=17% Similarity=0.213 Sum_probs=194.4
Q ss_pred CHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC
Q 001769 569 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1016)
Q Consensus 569 sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~ 648 (1016)
||+|++..++++-+.......+.+.+..|++..+...+... .+...+...+ ...+|..++..++++++++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~ 75 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKAYD----MFIETNLGDP-GLFPGTKKIEEEVVGSLGNLLHLP 75 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHHHH----HHhhcCCCCc-ccCccHHHHHHHHHHHHHHHhCCC
Confidence 68999999999988776653333333346655544322221 1111011111 223466778889999999999998
Q ss_pred cee-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcC
Q 001769 649 SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1016)
Q Consensus 649 ~~~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~ 727 (1016)
... +..++|+++...++.+++... ..+ .++++|++++..|.++...++..|++++.+++++++.+|+++++++++
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~-- 151 (373)
T TIGR03812 76 DAYGYIVSGGTEANIQAVRAAKNLA-REE-KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID-- 151 (373)
T ss_pred CCCeEEeccHHHHHHHHHHHHHHHH-hcc-CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHh--
Confidence 543 455666554433333333211 111 245789999999988888888999999999998889999999999997
Q ss_pred CCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcC-----C-C---CccCCcEEEeCccccccC
Q 001769 728 RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-----S-P---GYIGADVCHLNLHKTFCI 797 (1016)
Q Consensus 728 ~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~-----~-p---g~~GaDi~~~s~hK~~~~ 797 (1016)
+++.+|++..| |.+|.+. |+++|+++||++|++++||+|+......+. . + ...|+|++++++||+...
T Consensus 152 -~~~~~vv~~~~~~~tG~~~-~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~ 229 (373)
T TIGR03812 152 -DNTIGIVGIAGTTELGQID-DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLS 229 (373)
T ss_pred -hCcEEEEEECCCCCCCccC-CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCC
Confidence 56654444445 5689998 899999999999999999998753221111 1 1 124889999999996532
Q ss_pred CCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHH
Q 001769 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1016)
Q Consensus 798 phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~ 877 (1016)
| .++.|+++.++++.+.+........+ .......++ + +...++.+++.|..++.+|+.++.++..+
T Consensus 230 ~----~~~G~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~gt-~--~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 230 P----IPAGGILFRSKSYLKYLSVDAPYLTV-------KKQATITGT-R--SGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred c----CCceEEEEeCHHHHhhhcccCcccCC-------CCCcceEee-c--hhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2 12335565666655444210000000 000000011 1 12345567888999999999999999999
Q ss_pred HHHHHHHHHhc-cCCccc
Q 001769 878 NANYMAKRLEK-HYPILF 894 (1016)
Q Consensus 878 nA~yla~~L~~-~~~v~y 894 (1016)
+++|++++|++ ++...+
T Consensus 296 ~~~~l~~~L~~~g~~~~~ 313 (373)
T TIGR03812 296 NTRYLVEELKKIGFEPVI 313 (373)
T ss_pred HHHHHHHHHHhCCCeEEc
Confidence 99999999987 454444
No 85
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=3e-20 Score=215.18 Aligned_cols=266 Identities=20% Similarity=0.203 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH---HhCCcEEEEEcCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a---~~~G~~vv~v~~d 710 (1016)
..++++.+++++|.+.+ +.+++|.+|..+++.++. +++++|+++...|+.+...+ ...|++++.++
T Consensus 55 ~~~lE~~lA~l~g~~~~-l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 55 LRPLEEALAKLEGGVDA-LAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 34788999999998764 556788776654444331 35789999998887765544 45688888765
Q ss_pred CCCCCCHHHHHHHHHcCCC-CEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 711 AKGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~-~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ + +|++|++++|+ .+|.+. |+++|+++||++|+++++|.++ +.+...+|.++|+|+++
T Consensus 124 ----~d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~-dl~~I~~la~~~gi~livD~t~--a~~~~~~~l~~GaDivv 193 (385)
T PRK08574 124 ----PSTEDIIEAIK---EGRTKLVFIETMTNPTLKVI-DVPEVAKAAKELGAILVVDNTF--ATPLLYRPLRHGADFVV 193 (385)
T ss_pred ----CCHHHHHHhcC---ccCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCC--CccccCChhhhCCcEEE
Confidence 37899999997 5 89999999985 678887 8999999999999999999765 34444567789999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+|+.| |+.-+|.++++ +++...+.. . ....|...+ ++ .+|+...|.+.
T Consensus 194 ~S~sK~l~g~---~d~~gG~vi~~~~~~~~~~~~--~-----------~~~~g~~~~-p~---------~a~l~l~~l~t 247 (385)
T PRK08574 194 HSLTKYIAGH---NDVVGGVAVAWSGEFLEELWE--W-----------RRRLGTIMQ-PF---------EAYLVLRGLKT 247 (385)
T ss_pred eeCceeecCC---CCceeEEEEECcHHHHHHHHH--H-----------HHhcCCCCC-HH---------HHHHHHcccCc
Confidence 9999999522 22335655554 444433210 0 011222221 11 45677778899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE--------------EEEecCchhHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF--------------IVDLRGLKEELDRYCDALISIREEI 930 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~--------------i~~~~~~~~~ld~f~~~l~~i~~e~ 930 (1016)
|..+.+++.+||.+++++|+++ -+|.|||+++++.|++ .|++++..+...+|+|+|+.+. .+
T Consensus 248 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~l~~-~~ 326 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLKLIK-PS 326 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCCcce-Ec
Confidence 9999999999999999999974 5799999988877652 3445555678899999999883 55
Q ss_pred HHHhcCCCCCCCCccccCCCCCC
Q 001769 931 AQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 931 ~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.++ | +.++|..+|.++.
T Consensus 327 ~s~--G----~~~sl~~~~~~~~ 343 (385)
T PRK08574 327 PSL--G----GVESLATYPVKSA 343 (385)
T ss_pred cCC--C----CCcceeeCCCcCC
Confidence 665 6 7899999998874
No 86
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.84 E-value=4.7e-20 Score=213.39 Aligned_cols=266 Identities=17% Similarity=0.224 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.+ +..++|+++..++++++. +++++|+++...|+... ..+...|++++.++.
T Consensus 56 ~~~le~~la~l~g~~~~-~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEGAERA-VATATGMSAIQAALMTLL--------QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 45788999999998754 557788776655554432 25678999888886532 235678999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|+++
T Consensus 127 ~-----d~~~l~~~i~---~~tklV~le~p~np~g~~~-dl~~I~~la~~~gi~livD~a~~--~~~~~~pl~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK---PNTKLVFVETPSNPLGELV-DIAALAELAHAIGALLVVDNVFA--TPVLQQPLKLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhhCCCEEE
Confidence 3 8999999997 789999999995 578887 99999999999999999997753 3334567789999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
+|+||+|+.+ |...+|+++.++++.+.+... ....|...+ ++ -+++...|.+.|
T Consensus 196 ~S~sK~l~g~---g~~~gG~vv~~~~~~~~l~~~-------------~~~~g~~~~-p~---------~a~~~l~~l~tl 249 (380)
T TIGR01325 196 YSATKHIDGQ---GRVMGGVIAGSEELMAEVAVY-------------LRHTGPAMS-PF---------NAWVLLKGLETL 249 (380)
T ss_pred eeccceecCC---CCeEEEEEEeCHHHHHHHHHH-------------HHhhCCCCC-HH---------HHHHHHhccCcH
Confidence 9999999521 222357888776654432100 011222221 22 234566788899
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
..+.+++.+||.++++.|+++ -+|.|||.++++.|+. .|+++ ..++..+|+++|+.| ..+.++
T Consensus 250 ~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~~~l~~~-~~~~s~ 327 (380)
T TIGR01325 250 SLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVLDAVELV-SITNNL 327 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHHHcCCcc-eEcccC
Confidence 999999999999999999975 4789999988888873 34455 456789999999987 445555
Q ss_pred hcCCCCCCCCccccCCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~~ 953 (1016)
| +.++|..+|.++.
T Consensus 328 --G----~~~sl~~~p~~~~ 341 (380)
T TIGR01325 328 --G----DAKSTITHPATTT 341 (380)
T ss_pred --C----CCCeeeeCCCccC
Confidence 6 7899999998873
No 87
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=5e-20 Score=213.29 Aligned_cols=267 Identities=17% Similarity=0.208 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc-cHHH---HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT---AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~-~~~~---a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+. .+..++|.++...++. .+. .++++|++++..|+. +... +...|++++.++.
T Consensus 54 ~~~L~~~lA~l~g~~~-~i~~~sg~~Ai~~~l~---~l~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 124 (386)
T PRK08045 54 RDVVQRALAELEGGAG-AVLTNTGMSAIHLVTT---VFL-----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_pred HHHHHHHHHHHhCCCe-EEEECCHHHHHHHHHH---HHc-----CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC
Confidence 3478899999999654 4666777655433333 221 367899999887764 3222 2235667777653
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|+++
T Consensus 125 -----~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g~~vivDeay~--~~~~~~pl~~gaDivv 193 (386)
T PRK08045 125 -----GDEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREAGAVSVVDNTFL--SPALQNPLALGADLVL 193 (386)
T ss_pred -----CCHHHHHHhcc---cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCC--ccccCCchhhCCCEEE
Confidence 68999999997 789999999996 678887 89999999999999999997753 4445678899999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++.+ ++--+|.++++ +++.+.+.. . ...+|... +++ -+|+...|.+.
T Consensus 194 ~S~tK~l~G~---~d~~~G~vi~~~~~~~~~l~~--~-----------~~~~g~~~-~p~---------~~~l~~rgl~t 247 (386)
T PRK08045 194 HSCTKYLNGH---SDVVAGVVIAKDPDVVTELAW--W-----------ANNIGVTG-GAF---------DSYLLLRGLRT 247 (386)
T ss_pred eecceeccCC---CCceeEEEEeCcHHHHHHHHH--H-----------HHhcCCCC-CHH---------HHHHHHhhhcc
Confidence 9999999611 22236777664 444332210 0 01122221 121 46778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+++++.+||..++++|+++ -+|.|||+++++.|+. .|++++.++++.+|+++|+.| ..+.+
T Consensus 248 l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s 326 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLF-TLAES 326 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccce-eEecc
Confidence 9999999999999999999986 4789999999998884 345555567789999999987 45666
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 327 ~--G----~~~sl~~~~~~~~ 341 (386)
T PRK08045 327 L--G----GVESLISHAATMT 341 (386)
T ss_pred C--C----CCceeEeCCCCcc
Confidence 5 6 7899999999874
No 88
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.84 E-value=4.8e-19 Score=198.37 Aligned_cols=297 Identities=16% Similarity=0.196 Sum_probs=211.8
Q ss_pred CCCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChh--hhhcccccccccccCCCCCchhhhhHHHHHHH
Q 001769 559 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT--TEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1016)
Q Consensus 559 l~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~--~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~e 636 (1016)
.++| ..+++.+++++.+++....|-.+.. .+-|+.++.... .+........ ++|..| +.+++..++..+
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~---~~vS~~v~~~~~~~~~l~~~~~~k---~N~l~~-d~fp~~~~~e~~ 124 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRL---GLASGVVYWGEPELDKLIMEAYNK---FNPLHP-DEFPVVRKLEAE 124 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCccc---CeeeEEEecCCcchhhHHHHHHhh---cCccCc-cccchhHHHHHH
Confidence 3688 4889999999999988877754322 122444433322 2222222223 478888 899999999999
Q ss_pred HHHHHHHHhCCCcee-eecCChHHHHHHHHHHHHHHHHh----cCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC-
Q 001769 637 LGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKA----RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD- 710 (1016)
Q Consensus 637 l~~~laeL~G~~~~~-l~~~sGa~ae~a~l~air~~~~~----~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d- 710 (1016)
+..|+|.|++.+... -..++| +.++++++.+.|+.. +|. .++.|+++.+.|..+.+.++.++++++.||++
T Consensus 125 ~Vnm~~~L~~~~~~~~g~~t~G--~Ses~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSCGCGTVG--GSESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHHhcCCccccCccccc--cchHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEEEeeeccc
Confidence 999999999988542 222223 345778888877532 333 45689999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHH-cCcEEEEEccccccccCcCCC-C-----cc
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSP-G-----YI 782 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~-~g~lv~vDga~~~a~~~l~~p-g-----~~ 782 (1016)
.+.++|+..+.+.++ +||++|+.+.|+ .+|.++ |+++|.++..+ +++.+|||++ ++++..| + .|
T Consensus 202 ~~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e-~ve~l~~l~~e~w~ipiHvDa~----~GgFi~p~~~~~~~~f 273 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIE-DVEKLADLLLEIWDIPIHVDAC----LGGFINPAGYLNEEEF 273 (491)
T ss_pred cceEecHHHHHHHhc---cceEEEEEEcCCCCccchh-hHHHHHHHHHHHhCCceeeccc----CccccccccccCcccc
Confidence 568999999999998 899999999998 589998 99999999999 9999999964 5666655 2 22
Q ss_pred C-----CcEEEeCccccccCCCCCCCCeEEEEEEccc-cc-ccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHH
Q 001769 783 G-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1016)
Q Consensus 783 G-----aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~-l~-~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~ 855 (1016)
| +-.+..+.||+=. -.+|+|.+.-+.+ +. .++-. ...+.|.. .++..+..+..| ...+.
T Consensus 274 dFr~p~V~Sisa~~HKYGl-----~~~G~~~vl~r~k~~~~~q~~~-~~~w~Gg~------y~s~TlngSR~g--~~va~ 339 (491)
T KOG1383|consen 274 DFRVPGVTSISADGHKYGL-----APAGSSWVLYRNKELLPHQLFF-HTDWLGGI------YASPTLNGSRPG--SQVAA 339 (491)
T ss_pred ccCCCCceeEeeccceeee-----eecCcEEEEEcccccccceEEE-eccccCcc------ccCcccccCCcc--cHHHH
Confidence 2 2335667899733 3357777777643 22 12110 01112211 122222222222 34566
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 856 a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+|+.|..+|.+|+++.++++++++.+|++.|++.
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i 373 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENI 373 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 7999999999999999999999999999999973
No 89
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.84 E-value=2.5e-19 Score=207.93 Aligned_cols=312 Identities=14% Similarity=0.163 Sum_probs=209.3
Q ss_pred ccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHH
Q 001769 168 KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC 247 (1016)
Q Consensus 168 ~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a 247 (1016)
.+|+|.+..|..+.+.+. .+.+ |.+.|++ +....|+.+.+.++++.+|+++|.+. +.++++++.++.+++.+
T Consensus 46 ~~~lg~~~~~~v~~~~~~-~~~~---~~~~~~~--s~~~~G~~~~~~~le~~ia~~~g~~~--~ii~~~~~~a~~~~~~~ 117 (393)
T TIGR01822 46 NNYLGLSSHPDLIQAAKD-ALDE---HGFGMSS--VRFICGTQDIHKELEAKIAAFLGTED--TILYASCFDANGGLFET 117 (393)
T ss_pred CCccccCCCHHHHHHHHH-HHHH---hCCCCCC--cCcccCChHHHHHHHHHHHHHhCCCc--EEEECchHHHHHHHHHH
Confidence 356666644433333332 3322 2233432 22445888888999999999999864 77889999888877766
Q ss_pred hccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHH
Q 001769 248 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFI 319 (1016)
Q Consensus 248 ~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~~------~t~~V~v~~p-n~~G~i~dl~eI~ 319 (1016)
+ . +++|+|++++..|+++...++. ++..++.+..+|++++++ +.+ ++++|++..+ |.+|.+.|+++|+
T Consensus 118 l-~--~~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~ 193 (393)
T TIGR01822 118 L-L--GAEDAIISDALNHASIIDGVRL-CKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEIC 193 (393)
T ss_pred h-C--CCCCEEEEeccccHHHHHHHHh-cCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHH
Confidence 6 3 3799999999999999988754 444455555577888776 542 6777877765 7899999999999
Q ss_pred HHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEe
Q 001769 320 KNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVG 389 (1016)
Q Consensus 320 ~lah~~GalviV~a~~~alg~l~~pg---------~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG 389 (1016)
++||++|+++++| +.+++|.+...+ ..++||+++|. |.|+ |+.+||+++++++.+.+...
T Consensus 194 ~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~--- 263 (393)
T TIGR01822 194 DLADKYDALVMVD-ECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG------GASGGFTTARKEVVELLRQR--- 263 (393)
T ss_pred HHHHHcCCEEEEE-CCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHh---
Confidence 9999999999994 455555543211 12689999998 7653 34568999988877655110
Q ss_pred eeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 001769 390 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 469 (1016)
Q Consensus 390 ~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l 469 (1016)
...+.+ .+|.+. ....+..+++ ..+ ++.+++.+++.++.+++.+.|++.| +++
T Consensus 264 -------~~~~~~------------~~~~~~---~~~~a~~~al--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 316 (393)
T TIGR01822 264 -------SRPYLF------------SNSLPP---AVVGASIKVL--EML--EASNELRDRLWANTRYFRERMEAAG-FDI 316 (393)
T ss_pred -------Ccccee------------cCCCCH---HHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 000100 111111 1222222232 222 3456788899999999999999887 776
Q ss_pred cCCCCccEEEEecCC---HHHHHHHHHHcCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 470 QGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 470 ~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+. ...+.+..++ +.++.+.|.++||.+... ....+|+|++..+|++||++++++|..
T Consensus 317 ~~~~-~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 317 KPAD-HPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred CCCC-CCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 5321 2233344333 678999999999987521 124699999999999999999999963
No 90
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=1.5e-18 Score=202.59 Aligned_cols=290 Identities=15% Similarity=0.135 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhc-cccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~-~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
-+.+.++++.+|+++|.+..++.+.+|+|.+++.++.++. ...++||+|+++..+|+++..+++.+ +..|++++.++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc
Confidence 3568889999999999988888899999988887665542 11137899999999999999988764 345888887654
Q ss_pred --------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001769 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1016)
Q Consensus 289 --------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k 357 (1016)
+++++ +++++++|+++++ |.+|.+.|+++|.++||++|+++++|+ .+++|... +..++|+|+++++++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDA-AQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEc-chhcCCcccCcccCCCCEEEEehh
Confidence 34666 7888999998886 789999999999999999999999942 44555543 446789999999995
Q ss_pred cccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~ 437 (1016)
|+.+| ++.|+++++++...++.+.+.|.. . ..+.+.+|.|+. .+.++.+++-..
T Consensus 206 K~~gp-----~g~G~l~~~~~~~~~~~~~~~g~~------~-----------~~~~~~gt~~~~---~~~~l~~al~~~- 259 (404)
T PRK14012 206 KIYGP-----KGIGALYVRRKPRVRLEAQMHGGG------H-----------ERGMRSGTLPTH---QIVGMGEAARIA- 259 (404)
T ss_pred hccCC-----CceEEEEEecCCCCCCCceecCCC------c-----------cCCccCCCcCHH---HHHHHHHHHHHH-
Confidence 55333 246889998765434433333311 0 012456777773 344555555222
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-C-C-ccE--EEEecCCHHHHHHHHHHcCceee----c-------
Q 001769 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P-F-FDT--VKVKCADAHAIASAAYKIEMNLR----V------- 501 (1016)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~-~-~~~--v~i~~~~~~~v~~~L~~~GI~~~----~------- 501 (1016)
..+++++.++...+++++.+.|+++.++.+.+. + . ... +.+...+..++.+.|.+.+|... .
T Consensus 260 --~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~ 337 (404)
T PRK14012 260 --KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSY 337 (404)
T ss_pred --HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCH
Confidence 235677889999999999999998754776532 1 1 122 34443334567777654333211 0
Q ss_pred ----------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 502 ----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 502 ----------~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
...+.||+|++.++|++|+|+++++|..
T Consensus 338 ~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 338 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 1247899999999999999999999964
No 91
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=7.4e-20 Score=213.04 Aligned_cols=267 Identities=18% Similarity=0.245 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcccc----HHHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN----PATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~----~~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+. .+.+++|+++.. ++++.+. +++++|+++...|+.. ...+...|++++.++.
T Consensus 62 ~~~Le~~lA~l~g~~~-~v~~~sG~~Ai~---~~l~all-----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 62 RDLLGEALAELEGGAG-GVITATGMGAIN---LVLNALL-----QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHhCCCc-eEEEcCHHHHHH---HHHHHHh-----CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 3468899999999764 466777765443 3333331 3578899987766542 2234567889988876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|+++
T Consensus 133 -----~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~-dl~~I~~la~~~gi~vIvD~a~a--~~~~~~pl~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA---QSPKLVLIETPSNPLLRIT-DLRFVIEAAHKVGALTVVDNTFL--SPALQKPLEFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCCc--ccccCCcccccCCEEE
Confidence 58999999997 78999999999 5789887 99999999999999999997763 3445678889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+|+.| |+-.+|.++++ +++.+.+-. . ....|... +++ -+|+...|.+.
T Consensus 202 ~S~tK~l~g~---~~~~~G~vv~~~~~l~~~l~~--~-----------~~~~g~~~-s~~---------~a~l~~~gl~t 255 (405)
T PRK08776 202 HSTTKYINGH---SDVVGGAVVARDAELHQQLVW--W-----------ANALGLTG-SPF---------DAFLTLRGLRT 255 (405)
T ss_pred ecCceeecCC---CCceEEEEEeCCHHHHHHHHH--H-----------HHhcCCCC-CHH---------HHHHHHhhhCc
Confidence 9999999622 23335666665 444333210 0 01112111 122 23445577888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+.+++..|+.++++.|+++ -+|.|||..+++.|++ .|++++..++..+|+|+|+.| ..+.+
T Consensus 256 l~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~-~~~~s 334 (405)
T PRK08776 256 LDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYF-TLAES 334 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcc-eEccC
Confidence 9999999999999999999975 5899999999988883 345555566789999999987 35556
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 335 ~--G----~~~sl~~~p~~~~ 349 (405)
T PRK08776 335 L--G----GVESLIAHPASMT 349 (405)
T ss_pred C--C----CCceEEECCcccc
Confidence 5 6 7899999998874
No 92
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=1.6e-18 Score=199.32 Aligned_cols=319 Identities=14% Similarity=0.113 Sum_probs=213.1
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCc--cEEEccchHHHHHHHHHHh
Q 001769 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCN 248 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~a--nasl~~~~Taa~eA~~~a~ 248 (1016)
.+.| |..+++.+.+++.. .| ..++ + ...+.+.+.++.+++|+|++.. ++.++.++|.++++++.++
T Consensus 7 ~~pg--p~~~~~~v~~~~~~--~~-~~~~---~----~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l 74 (363)
T TIGR02326 7 LTPG--PLTTSRTVKEAMLF--DW-CTWD---S----DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA 74 (363)
T ss_pred ecCC--CCCCCHHHHHHhCC--CC-CCCC---h----HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc
Confidence 3556 66787777655443 22 1122 2 2345677888999999999754 5778899999999888776
Q ss_pred ccccCCCCE-EEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEc-CCCCeeeccH
Q 001769 249 NIQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQY-PGTEGEVLDY 315 (1016)
Q Consensus 249 ~~~~~~gd~-Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~--~~t~~V~v~~-pn~~G~i~dl 315 (1016)
.. ++++ |+++...|+.... ..++..|++++.++. +++++ +. ++++.|.+.+ .|.+|.+.|+
T Consensus 75 ~~---~~~~vlv~~~~~~~~~~~---~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i 148 (363)
T TIGR02326 75 VP---KDGKLLVVINGAYGARIV---QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI 148 (363)
T ss_pred CC---CCCeEEEEeCChhhHHHH---HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence 32 4454 5667778876532 224556888877654 34555 43 3556676666 4789999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeec
Q 001769 316 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1016)
Q Consensus 316 ~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d 393 (1016)
++|+++||++|++++|+ ...++|... +..++|+|++++++ |+|++ +||+||++++++.++++.+...+
T Consensus 149 ~~I~~l~~~~g~~livD-~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~-----p~G~G~l~~~~~~~~~~~~~~~~---- 218 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVD-AMSSFGGIPIDIAELHIDYLISSANKCIQG-----VPGFGFVIARQAELAACKGNARS---- 218 (363)
T ss_pred HHHHHHHHHcCCEEEEE-ccccccCcccchhhcCccEEEecCcccccc-----CCcceEEEECHHHHHHhhcCCCc----
Confidence 99999999999999995 345666542 34678999999999 65753 45679999999877665332211
Q ss_pred CCCCcceeeecccccccccc----cccCCccchhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 394 SSGKPALRVAMQTREQHIRR----DKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 394 ~~g~~~~~l~lqtreqhiRR----ekaTsnicT~~~l~a~~Aa~y~~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
+.+.+......... ...|.|+ ....++.+++ .++..+ |++++.+++.++..++++.|+++| ++
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~ft~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~ 286 (363)
T TIGR02326 219 ------LSLDLYDQWRCMEDNHGKWRFTSPT---HVVHAFAQAL--LELEKEGGVAARHQRYQQNQKTLVAGMRALG-FE 286 (363)
T ss_pred ------eeecHHHHHHHHhccCCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Ce
Confidence 22221100000000 0113332 3445555554 333333 689999999999999999999997 88
Q ss_pred EcCCC--CccE-EEEecCC-----HHHHHHHHHHcCceeecc---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 469 VQGLP--FFDT-VKVKCAD-----AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 469 l~~~~--~~~~-v~i~~~~-----~~~v~~~L~~~GI~~~~~---~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++.++ .... +.|..+. ..++.+.|.++||.++.. ..+.+|++++.+++.+|+++++++|+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 287 PLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred eccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 76432 1222 2344332 478999999999988653 246899999888999999999999863
No 93
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.84 E-value=8.7e-20 Score=210.47 Aligned_cols=266 Identities=22% Similarity=0.231 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.+ +..+||.+|..++++++. +++++|+++...|+.... .+...|++++.++.
T Consensus 42 ~~~le~~la~l~g~~~a-~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 42 VDALEKKLAALEGGEAA-LAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred HHHHHHHHHHHHCCCCE-EEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 45788999999998764 556788776655554432 357889999888865443 24578999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ |+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|++. +.+.+..|.++|+|+++
T Consensus 113 ~-----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g~~livD~t~--~~~~~~~~~~~g~Divv 181 (369)
T cd00614 113 D-----DPEALEAAIK---PETKLVYVESPTNPTLKVV-DIEAIAELAHEHGALLVVDNTF--ATPYLQRPLELGADIVV 181 (369)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCC--cchhcCChhhhCCcEEE
Confidence 3 6999999997 789999999985 678887 9999999999999999999764 44545678889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|++|+++.+ |+..+|++++++ ++.+.+... ....|...+ + . .+|+...|.+.
T Consensus 182 ~S~tK~l~g~---~~~~gG~v~~~~~~l~~~l~~~-------------~~~~g~~~~-p-------~--~a~~~l~~l~t 235 (369)
T cd00614 182 HSATKYIGGH---SDVIAGVVVGSGEALIQRLRFL-------------RLALGTILS-P-------F--DAWLLLRGLKT 235 (369)
T ss_pred eccceeccCC---CCceEEEEEeCcHHHHHHHHHH-------------HHhhCCCCC-H-------H--HHHHHHcCCCC
Confidence 9999999521 334588999876 555443210 011122111 1 1 23444566688
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeE------------EEEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHE------------FIVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he------------~i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
+..+.+++.+||.+++++|+++ .+|.|||+++++.|+ +.+.+++..+...+|+++|+.| ..+.+
T Consensus 236 l~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~-~~~~s 314 (369)
T cd00614 236 LPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLF-SLAVS 314 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcc-eEccc
Confidence 8899999999999999999985 368899987776665 3455655567889999999987 33555
Q ss_pred HhcCCCCCCCCccccCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~ 952 (1016)
+ | +.++|..+|.++
T Consensus 315 ~--G----~~~sl~~~~~~~ 328 (369)
T cd00614 315 L--G----GVESLVEHPASM 328 (369)
T ss_pred C--C----CCceeeeCCccc
Confidence 4 6 789999988876
No 94
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=5.9e-20 Score=212.33 Aligned_cols=265 Identities=19% Similarity=0.195 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.+ +..+||+.|..+++ ++ . +++++|++++..|+... ..+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g~~~a-l~~~SG~~Al~~~l-~~---l-----~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEGGVKG-FAFASGLAGIHAVF-SL---F-----QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhCCCCE-EEECCHHHHHHHHH-HH---c-----CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 35788999999998765 66688876653322 21 1 35789999887665332 224568999998876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++ +.+....|.++|+|+++
T Consensus 122 -----~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~-di~~I~~la~~~gi~vivD~t~--a~~~~~~p~~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK---PNTKALYLETPSNPLLKIT-DLAQCASVAKDHGLLTIVDNTF--ATPYYQNPLLLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEECCc--cccccCCccccCCCEEE
Confidence 48999999997 789999999996 678887 9999999999999999999765 34445678899999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++.| |+..+|++++++ ++...+.. . .+..|...+ ++ -+|+...|.++
T Consensus 191 ~S~tK~l~g~---~d~~gG~vv~~~~~~~~~~~~--~-----------~~~~G~~~~-~~---------~~~l~~~gl~t 244 (380)
T PRK06176 191 HSGTKYLGGH---SDVVAGLVTTNNEALAQEIAF--F-----------QNAIGGVLG-PQ---------DSWLLQRGIKT 244 (380)
T ss_pred ecCceeccCC---ccceeeEEEecHHHHHHHHHH--H-----------HHHhcCCCC-HH---------HHHHHHhccCc
Confidence 9999999622 223467777764 33332210 0 011222221 11 34566778899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+++++..||..+++.|+++ .+|.|||+.+++.|++ .|++++ .+++.+|+++|+.| ..+.+
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~f~~~l~~~-~~~~s 322 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN-DSEAVAFVESLKLF-ILGES 322 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHHHHHcCCcc-eEccC
Confidence 9999999999999999999974 6899999988888873 344543 46889999999987 45666
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 323 ~--G----~~~sl~~~p~~~~ 337 (380)
T PRK06176 323 L--G----GVESLVGIPAFMT 337 (380)
T ss_pred C--C----CCCceeeCCcccc
Confidence 5 6 7899999998873
No 95
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.84 E-value=1.7e-18 Score=202.31 Aligned_cols=345 Identities=15% Similarity=0.102 Sum_probs=223.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcC-CCccccccCCCCCCCC-ChHHHHHHHH----hCCCcccccCCChhHHhhhHHHH
Q 001769 139 MKFSKFDEGLTESQMIEHMQKLASM-NKVYKSFIGMGYYNTH-VPPVILRNIM----ENPAWYTQYTPYQAEIAQGRLES 212 (1016)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~l~~la~~-n~~~~~~lG~g~y~~~-~p~~i~~~i~----~~~~~~t~ytPyq~e~sqG~le~ 212 (1016)
..|| +++++..|++++|...-.. +.....|.|. ..+. .|.+.. .+. ++.. .|.. +....+.
T Consensus 15 ~~~p--~~~~~~~~~~~~~~~~iyld~~a~~~~~~~--~tt~~~p~~~~-~~~~~l~~~~~-----np~s---~~~~~~l 81 (431)
T TIGR01788 15 YRMP--EEEMPPDAAYQLIHDELSLDGNPRLNLATF--VTTWMEPEARK-LMDETINKNMI-----DKDE---YPQTAEI 81 (431)
T ss_pred ccCC--CCCCCHHHHHHHHHHHhhhcCCcceeeeee--eCCCCCHHHHH-HHHHHHhcCCC-----Cccc---CccHHHH
Confidence 3577 6899999999999865322 1111222222 1222 444432 332 2221 2222 1223378
Q ss_pred HHHHHHHHHHHcCCCC--ccE--EEccchHHHHHHHHHHhccc--c-----C---CCCEEEEcCCCCHHHHHHHHHhhcC
Q 001769 213 LLNFQTMIADLTGLPM--SNA--SLLDEGTAAAEAMAMCNNIQ--K-----G---KKKTFIIASNCHPQTIDICITRADG 278 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~--ana--sl~~~~Taa~eA~~~a~~~~--~-----~---~gd~Vlvs~~~Hps~~~~l~~~a~~ 278 (1016)
+.+..+++|+++|++. ..+ .+++|||.++..++.+.+.. + + .+.+|++++.+|+++.+.++.
T Consensus 82 e~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~---- 157 (431)
T TIGR01788 82 ENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY---- 157 (431)
T ss_pred HHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----
Confidence 8889999999999982 234 34689987666544443311 0 0 124799999999999988653
Q ss_pred CCeEEEEeCc---------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC------CcEEEEEe-cccc---
Q 001769 279 FDIKVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMAT-DLLA--- 337 (1016)
Q Consensus 279 ~gi~v~~vd~---------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~------GalviV~a-~~~a--- 337 (1016)
.|++++.++. ++|++ ++++|.+|+++.. |.+|.++|+++|+++|+++ |++++|++ +..+
T Consensus 158 lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p 237 (431)
T TIGR01788 158 FDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAP 237 (431)
T ss_pred cCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHH
Confidence 4666666554 33555 7888999999986 5789999999999999999 99999943 2211
Q ss_pred --ccCCC-CCCcccceEEEecCcccc-ccCCCCCcceEEEEeehh--hhhcCC--CceEeeeecCCCCcceeeecccccc
Q 001769 338 --LTILK-PPGELGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQ 409 (1016)
Q Consensus 338 --lg~l~-~pg~~GaDivvgs~k~lg-~P~g~GGP~~Gfl~~~~~--l~~~lp--grivG~s~d~~g~~~~~l~lqtreq 409 (1016)
.+-+. +....|||.+..+++||+ +|. ++|++++|++ +.+.+. ...+|. +...+.+.. +
T Consensus 238 ~~~~~~~~~~~~~~~DSis~s~HK~~~~P~-----g~G~l~~r~~~~l~~~~~~~~~yl~~-----~~~~~t~~~-s--- 303 (431)
T TIGR01788 238 FVYPDLEWDFRLPRVKSINVSGHKYGLVYP-----GVGWVIWRDEEALPEELIFHVNYLGG-----DEPTFTLNF-S--- 303 (431)
T ss_pred HhCCCchhhcCCCCceEEEECchhccCCCC-----CcEEEEEeChHHcchhheecccccCC-----CCCCcceec-C---
Confidence 11111 113458899999997764 453 4689999875 323221 111221 000011111 1
Q ss_pred cccccccCCccchhhHHHHHHHHHH--HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecC---
Q 001769 410 HIRRDKATSNICTAQALLANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--- 483 (1016)
Q Consensus 410 hiRRekaTsnicT~~~l~a~~Aa~y--~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~--- 483 (1016)
| .+.-++ ++| +..+|.+|++++.+++.+++++|.++|+++++++++.+ +.+..|+|+.+
T Consensus 304 --R-----------~g~~al--~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~ 368 (431)
T TIGR01788 304 --R-----------PANQVI--AQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA 368 (431)
T ss_pred --c-----------hHHHHH--HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC
Confidence 1 111111 233 57889999999999999999999999999977999875 56777777754
Q ss_pred --C--HHHHHHHHHHcCceeecc-c------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 484 --D--AHAIASAAYKIEMNLRVV-D------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 484 --~--~~~v~~~L~~~GI~~~~~-~------~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+ ..++.++|.++||.+... . .-.+|+++.+..+++.+++|++.|+.
T Consensus 369 ~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 369 DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 2 578999999999965321 1 13589999999999999999999874
No 96
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.3e-18 Score=196.89 Aligned_cols=325 Identities=18% Similarity=0.240 Sum_probs=232.9
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCcc-EEEccchHHHHHHHHHHh
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCN 248 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~an-asl~~~~Taa~eA~~~a~ 248 (1016)
.+..| |..+|+.|.+++.. +- .... .++ -.+.+.+.++.+-.+++.+-.. +.+..+||.++||++.++
T Consensus 8 Ll~PG--P~~v~~~V~~am~~-~~-~~h~---s~~----F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 8 LLTPG--PVPVPPRVLLAMAR-PM-VGHR---SPD----FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeCC--CCCCCHHHHHHhcC-CC-CCCC---CHH----HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 45667 67788888765553 22 1212 223 3345566667888899987433 445588999999988766
Q ss_pred ccccCCCCEEEEcC-CCCHHHHHHHHHhhcCCCeEEEEeC--------chhhhc-cC--CCEeEEEEEcC-CCCeeeccH
Q 001769 249 NIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSD--------LKDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (1016)
Q Consensus 249 ~~~~~~gd~Vlvs~-~~Hps~~~~l~~~a~~~gi~v~~vd--------~~~L~~-l~--~~t~~V~v~~p-n~~G~i~dl 315 (1016)
- .++|+||+-. ..|..-..-+ ++.+|.+++.++ ++++++ ++ ++.+.|.+++. +.+|.++|+
T Consensus 77 ~---~pgdkVLv~~nG~FG~R~~~i---a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl 150 (383)
T COG0075 77 V---EPGDKVLVVVNGKFGERFAEI---AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPL 150 (383)
T ss_pred c---CCCCeEEEEeCChHHHHHHHH---HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcH
Confidence 3 2788877655 5776544443 556787777754 356666 54 67888888775 789999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeec
Q 001769 316 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1016)
Q Consensus 316 ~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d 393 (1016)
++|+++++++|++++|++ ..|+|.. .++.+||+|+++.++ |.|+.| ||+|+++++++.++.+-.+
T Consensus 151 ~~I~~~~k~~g~l~iVDa-VsS~Gg~~~~vd~wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~------- 217 (383)
T COG0075 151 KEIAKAAKEHGALLIVDA-VSSLGGEPLKVDEWGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEER------- 217 (383)
T ss_pred HHHHHHHHHcCCEEEEEe-cccCCCcccchhhcCccEEEecCchhccCC-----CccceeEECHHHHHHHhcC-------
Confidence 999999999999999954 3466654 356899999999999 668766 7899999999988877322
Q ss_pred CCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC
Q 001769 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (1016)
Q Consensus 394 ~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~ 473 (1016)
..++|.++|....+...+...|+.....+.++|+..++ ..+-.+|++++.+|.+.++++++++++++| ++++.++
T Consensus 218 --~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al--~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~ 292 (383)
T COG0075 218 --KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREAL--DLILEEGLEARIARHRRLAEALRAGLEALG-LELFADP 292 (383)
T ss_pred --CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCc
Confidence 12258888765444443334566666668888888876 667789999999999999999999999998 9987532
Q ss_pred --CccEE-EEecCC---HHHHHHHHHH-cCceeec----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 474 --FFDTV-KVKCAD---AHAIASAAYK-IEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 474 --~~~~v-~i~~~~---~~~v~~~L~~-~GI~~~~----~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+++ ++..|. ..++...+.+ .|+.+.. +.+..+||..+=.-+.+|+...+.+|+.
T Consensus 293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~ 359 (383)
T COG0075 293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359 (383)
T ss_pred ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHH
Confidence 23343 445554 3345445554 5887643 3357899998888899999999999874
No 97
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=2.2e-19 Score=210.20 Aligned_cols=279 Identities=17% Similarity=0.187 Sum_probs=195.5
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc-ccHHHHH---hCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPATAA---MCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg-~~~~~a~---~~G~~vv~v~~d 710 (1016)
.++++.|+++.|.+. .+..++|.+|..+++.++. +++++|+++...++ ++..... ..|+++.+++.
T Consensus 61 ~~Le~~lA~l~g~~~-~l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 61 DVLEQRVAALEGGVG-ALAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred HHHHHHHHHHhCCCc-eeEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence 378899999999765 4566778766644444432 25678999877666 3333322 36888887775
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|++++
T Consensus 131 ----~d~e~le~ai~---~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~i~vVvD~a~a--~~~~~~p~~~gaDivv~ 200 (425)
T PRK06084 131 ----DDIAALEALID---ERTKAVFCESIGNPAGNII-DIQALADAAHRHGVPLIVDNTVA--TPVLCRPFEHGADIVVH 200 (425)
T ss_pred ----CCHHHHHHHhc---cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCc--ccccCChhhcCCCEEEE
Confidence 48999999998 78999999998 5789887 99999999999999999997654 44456788899999999
Q ss_pred CccccccCCCCCCCCeEEEEEEccccc-ccCCCC--ccccC-CCC----CCC-----C--------cCCCCCCccCCccc
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLA-PFLPSH--PVVST-GGI----PAP-----E--------KSQPLGTIAAAPWG 848 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~-~~lpg~--~~g~~-g~~----~~r-----e--------~~~~~g~i~s~~~G 848 (1016)
|+||+|+.+ |..-+|+++.+.... ..+... ++..+ ..+ ..+ . ....+|...+ ++
T Consensus 201 S~tK~l~G~---g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~-~~- 275 (425)
T PRK06084 201 SLTKYIGGH---GTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALS-PF- 275 (425)
T ss_pred Cchhccccc---ccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCC-HH-
Confidence 999999622 333355555443211 011000 00000 000 000 0 0012222221 11
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGL 912 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~ 912 (1016)
-+|+.+.|.+.|..+++++.+||..++++|+++ -+|.|||..+++.|++ .|++++.
T Consensus 276 --------~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~ 347 (425)
T PRK06084 276 --------NAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGG 347 (425)
T ss_pred --------HHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCC
Confidence 577888999999999999999999999999985 5799999988887773 3445555
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 913 KEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 913 ~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.++..+|+++|+.+. .+.++ | +.++|..+|.++.
T Consensus 348 ~~~~~~f~~~l~l~~-~~~sl--G----~~~slv~~p~~~~ 381 (425)
T PRK06084 348 QAAGARFIDALKLVV-RLVNI--G----DAKSLACHPASTT 381 (425)
T ss_pred HHHHHHHHHhCCcce-ecccc--C----CCceeeeCCCcCC
Confidence 567899999999883 55665 6 7899999998873
No 98
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1e-19 Score=211.11 Aligned_cols=267 Identities=21% Similarity=0.237 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH-H---HhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-A---AMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~-a---~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.. +..++|.++..+++.++. +++++||++...|+..... . ...|++++.++.
T Consensus 63 ~~~Le~~lA~~~g~~~~-i~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 63 RTALEEQLAALEGGAYG-RAFSSGMAATDCLLRAVL--------RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 44788999999999875 445677665544444331 3678999998877643222 2 236888888876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++ +.+....|..+|+|+++
T Consensus 134 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~-dl~~I~~la~~~gi~lIvD~a~--a~~~~~~p~~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT---PRTKLIWVETPTNPLLSIT-DIAALAELAHDAGAKVVVDNTF--ASPYLQQPLALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCcceec-CHHHHHHHHHHcCCEEEEECCC--CccccCCchhhCCcEEE
Confidence 58999999997 789999999996 578886 9999999999999999999765 34444577788999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|++|+|+.| |+-.+|++++++ .+...+... ...+|...+ ++ -+|+...|.+.
T Consensus 203 ~S~sK~l~g~---~~~~gG~vv~~~~~l~~~~~~~-------------~~~~g~~~s-~~---------~a~l~~~~L~t 256 (388)
T PRK07811 203 HSTTKYIGGH---SDVVGGALVTNDEELDEAFAFL-------------QNGAGAVPG-PF---------DAYLTLRGLKT 256 (388)
T ss_pred ecCceeecCC---CCcEEEEEEECCHHHHHHHHHH-------------HHhcCCCCC-HH---------HHHHHHhccCc
Confidence 9999999521 222368787764 443332110 011122221 11 24566777788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
+..+.++...||..++++|+++ -.|.|||+++++.|+. .|++++..++..+|+|+|+.| ..+.+
T Consensus 257 l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s 335 (388)
T PRK07811 257 LAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVF-TLAES 335 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcc-eeecc
Confidence 9999999999999999999975 5799999999998883 345555567889999999987 34556
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 336 ~--G----~~~sl~~~~~~~~ 350 (388)
T PRK07811 336 L--G----GVESLIEHPSAMT 350 (388)
T ss_pred C--C----CCcceEeCCcccC
Confidence 5 6 7799999998773
No 99
>PLN03032 serine decarboxylase; Provisional
Probab=99.83 E-value=2.2e-18 Score=197.70 Aligned_cols=283 Identities=12% Similarity=0.025 Sum_probs=194.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccE--EEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 207 QGRLESLLNFQTMIADLTGLPMSNA--SLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~ana--sl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
..+.+...+..+++|+|+|+++..+ .+++|||.++...+++.|.. .++.+|+++..+|+|+.+.++.+ |++++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~-~~~~~vi~s~~~H~Sv~kaa~~l----g~~~~ 136 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARMY----RMEAV 136 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh-CCCcEEEeCCCceeHHHHHHHHc----CCCCe
Confidence 4567788889999999999987654 88899997665444433311 14568999999999999987653 33344
Q ss_pred EeC--------chhhhc-cCC---CEeEEEEEcC-CCCeeeccHHHHHHHHHhCC-----cEEEEEeccccccCCC----
Q 001769 285 VSD--------LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-----VKVVMATDLLALTILK---- 342 (1016)
Q Consensus 285 ~vd--------~~~L~~-l~~---~t~~V~v~~p-n~~G~i~dl~eI~~lah~~G-----alviV~a~~~alg~l~---- 342 (1016)
.++ +++|++ +++ ++.+|+++.. |.+|.|+|+++|+++|+++| ++++|++ ..+.+.+.
T Consensus 137 ~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDa-A~gg~~~p~~~~ 215 (374)
T PLN03032 137 KVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDG-ALFGLMMPFVSR 215 (374)
T ss_pred EeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEc-cchhhhhhccCC
Confidence 433 356766 644 4778888876 57899999999999999997 4899953 12222221
Q ss_pred C---CCcccceEEEecCccccc-cCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCC
Q 001769 343 P---PGELGADIVVGSAQRFGV-PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1016)
Q Consensus 343 ~---pg~~GaDivvgs~k~lg~-P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTs 418 (1016)
. ....++|.+..+++||++ |++ +|++++|+++.+.+.-. ..|--.. . .+
T Consensus 216 ~~~~~~~~~vDSis~s~HK~~g~P~g-----~G~ll~r~~~~~~~~~~-----------~~Yl~~~---d--------~t 268 (374)
T PLN03032 216 APEVTFRKPIGSVSVSGHKFLGCPMP-----CGVALTRKKHVKALSQN-----------VEYLNSR---D--------AT 268 (374)
T ss_pred CcccCCCcCCcEEEECcccccCCCcC-----eEEEEEEchhhHhhccC-----------CcccCCC---C--------Cc
Confidence 0 123579999999966654 754 57899998776655211 0010000 0 00
Q ss_pred ccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCce
Q 001769 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMN 498 (1016)
Q Consensus 419 nicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~ 498 (1016)
-.+|-.+..++..-+.+.++|.+|++++.+++.++|+||.+.|++.| ++++..|...+|+|..+.... + .+|+.
T Consensus 269 i~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~~~~V~f~~~~~~~----~-~~~w~ 342 (374)
T PLN03032 269 IMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNELSSTVVFERPMDEA----F-IKKWQ 342 (374)
T ss_pred ccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCCceEEEEcCCCcHh----H-hheee
Confidence 11111122222222236899999999999999999999999999987 887756666678877664222 2 25888
Q ss_pred eecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 499 ~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+... .+.+++++++.++++.+|+|++.|..
T Consensus 343 l~~~-~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 343 LACE-GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eccc-CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 8753 46899999999999999999999864
No 100
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=1.5e-19 Score=208.99 Aligned_cols=266 Identities=19% Similarity=0.203 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.. +.+++|+++..+ ++. .. +++++|++++..|+.+... +...|++++.++.
T Consensus 49 ~~~le~~la~l~g~~~~-l~~~sG~~al~~---~l~-ll-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLDKADRA-FAFSSGMAALDV---ITR-LL-----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHH---HHH-Hh-----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 45899999999999653 556777655432 222 11 3578999998878765432 4568999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++. .+....|.++|+|+++
T Consensus 119 -----~d~~~le~~i~---~~tklv~le~psnptg~v~-dl~~I~~la~~~g~~vivD~a~~--~~~~~~~l~~g~Di~v 187 (378)
T TIGR01329 119 -----TDLDKVKAALG---PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQNALVVVDNTMM--SPLLCNPLELGADIVY 187 (378)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCc--ccccCChhhcCCcEEE
Confidence 48999999997 899999999995 688887 99999999999999999998753 3444678889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEccc-ccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~-l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++.| ++..+|+++++++ +.+.+... ....|...+ ++ -+|+...|.+.
T Consensus 188 ~S~tK~l~G~---~~~~~G~v~~~~~~~~~~~~~~-------------~~~~G~~~~-~~---------~a~l~~~~l~t 241 (378)
T TIGR01329 188 HSATKFLAGH---SDVMAGVLAVKGEEIAKKVYFL-------------QNSTGSGLA-PF---------DCWLLLRGIKT 241 (378)
T ss_pred EecceeccCC---ccceeEEEEeCcHHHHHHHHHH-------------HHhcCCcCC-HH---------HHHHHHccCCC
Confidence 9999999622 2334788888653 32322100 001122111 21 34667788899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE----------EEEec-CchhHHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF----------IVDLR-GLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~----------i~~~~-~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
|..+.++...||..++++|+++ .+|.|||+++++.|++ ++++. +..+...+|++.|+.+ ..+.++
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~-~i~~s~ 320 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLF-SITVSF 320 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCc-ccccCC
Confidence 9999999999999999999975 5889999999888773 33332 3445588999999766 444443
Q ss_pred hcCCCCCCCCccccCCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~~ 953 (1016)
| +.++|..+|.++.
T Consensus 321 --G----~~~sl~~~p~~~~ 334 (378)
T TIGR01329 321 --G----SVNSLISMPCFMS 334 (378)
T ss_pred --C----CCCceeeCCCccc
Confidence 6 8899999999874
No 101
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.83 E-value=9.3e-20 Score=204.87 Aligned_cols=267 Identities=21% Similarity=0.206 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCc-cccH---HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAH-GTNP---ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saH-g~~~---~~a~~~G~~vv~v~~ 709 (1016)
...+++.++++.|.+.+ +.+.||-.+..+++..+. ..+++|+..+..+ |++. .....+|+++..+++
T Consensus 79 ~~~le~~iaal~ga~~~-l~fsSGmaA~~~al~~L~--------~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAHA-LLFSSGMAAITVALLHLL--------PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred hHHHHHHHHHHhCCceE-EEecccHHHHHHHHHHhc--------CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 34688999999999874 556677554444433332 2456777765544 4433 234589999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+..+. ||++|+++||++|++++|| |+++.+.+++|..+|||||+
T Consensus 150 -----~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~-DI~~l~~la~~~g~~vvVD--nTf~~p~~~~pL~lGADIV~ 218 (409)
T KOG0053|consen 150 -----DDLKKILKAIK---ENTKAVFLESPSNPLLKVP-DIEKLARLAHKYGFLVVVD--NTFGSPYNQDPLPLGADIVV 218 (409)
T ss_pred -----hhHHHHHHhhc---cCceEEEEECCCCCccccc-cHHHHHHHHhhCCCEEEEe--CCcCcccccChhhcCCCEEE
Confidence 47899999998 799999999995 566665 9999999999999999999 77888888999999999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|++|+|+ |.+.--+|.++++ +++++.+... ...+|.+.+ |+ .+|+...|.+.
T Consensus 219 hSaTKyi~---Ghsdvi~G~iv~n~~~~~~~l~~~-------------~~~lg~~~~-p~---------~~~ll~Rglkt 272 (409)
T KOG0053|consen 219 HSATKYIG---GHSDVIGGSVVLNSEELASRLKFL-------------QEDLGWCED-PF---------DLFLLSRGLKT 272 (409)
T ss_pred Eeeeeeec---CCcceeeeEEecCcHHHHHHHHHH-------------HHHhcCCCC-HH---------HHHHHhcCcch
Confidence 99999996 2234467888887 5565544321 123344332 32 57888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEEEEE------------ecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVD------------LRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~i~~------------~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
+..+++++.+||..+++.|+.+ -+|+|||+++|+.|+...+ ..+..++..+|+++||.+ ..+.+
T Consensus 273 l~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~-~~a~S 351 (409)
T KOG0053|consen 273 LHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLF-TKAPS 351 (409)
T ss_pred hhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhh-hcccC
Confidence 9999999999999999999975 4699999999999996432 122345778899999987 55666
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | ..++|...|..|.
T Consensus 352 l--G----~~eSL~~~p~~mt 366 (409)
T KOG0053|consen 352 L--G----GNESLAEPPAIMT 366 (409)
T ss_pred c--C----ccchhhcchhhhc
Confidence 5 6 7899999999883
No 102
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=1.2e-19 Score=209.86 Aligned_cols=267 Identities=18% Similarity=0.237 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+. .+..++|.++..+++.++. +++++|+++...|+..... ....|+++..++.
T Consensus 53 ~~~le~~lA~l~g~~~-v~~~~gg~~Ai~~~l~all--------~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 53 RDLLQQALAELEGGAG-AVVTNTGMSAIHLVTTALL--------GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 3478899999999654 3556677665544443331 3578999998877643322 2344677777653
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|..+|+|+++
T Consensus 124 -----~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~-dl~~I~~la~~~g~~vvvD~a~~--~~~~~~pl~~gaDivv 192 (382)
T TIGR02080 124 -----GDEQALRAALA---QKPKLVLIETPSNPLLRVV-DIAKICHLAKAVGAVVVVDNTFL--SPALQNPLALGADLVL 192 (382)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhhCCCEEE
Confidence 48999999997 789999999996 678887 99999999999999999997753 3334567788999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++.+ ++...|++.+++ ++.+.+.. ....+|...+ ++ -+|+...|.+.
T Consensus 193 ~S~sK~l~G~---~~~~~G~i~~~~~~~~~~l~~-------------~~~~~g~~~s-p~---------~a~l~lr~l~t 246 (382)
T TIGR02080 193 HSCTKYLNGH---SDVIAGAVIAKDPQVAEELAW-------------WANNLGVTGG-AF---------DSYLTLRGLRT 246 (382)
T ss_pred eecceeccCC---CCceeEEEEeCCHHHHHHHHH-------------HHHccCCCCC-HH---------HHHHHHcccch
Confidence 9999998521 233478877753 44333210 0011232222 22 35566778899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+.+++.+||..++++|+++ -+|.|||+++++.||+ .|++++..+++.+|+++|+.| ..+.+
T Consensus 247 l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~-~~~~s 325 (382)
T TIGR02080 247 LVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLF-TLAES 325 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcc-eEecc
Confidence 9999999999999999999975 4799999999988884 345555566789999999987 34566
Q ss_pred HhcCCCCCCCCccccCCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+ | +.++|..+|.++.
T Consensus 326 ~--G----~~~sl~~~p~~~~ 340 (382)
T TIGR02080 326 L--G----GVESLIAHPATMT 340 (382)
T ss_pred C--C----CCcceeECCCccC
Confidence 5 6 7899999998873
No 103
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.7e-19 Score=209.57 Aligned_cols=264 Identities=18% Similarity=0.098 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~d 710 (1016)
.++++.++++.|.+.+ +..+||++|...+++++- +++|+||+++..|+.+.. .+...|++++.++.+
T Consensus 68 ~~Le~~lA~l~g~~~~-l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~ 138 (394)
T PRK07050 68 LALAQRLAEIEGGRHA-LLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL 138 (394)
T ss_pred HHHHHHHHHHhCCCeE-EEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC
Confidence 5788999999998753 556777776655544431 367899999988876442 356789999988752
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
|.++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++ +.+...+|.++|+|++++
T Consensus 139 -----~~~~l~~~i~---~~tklV~le~p~Np~~~~~-di~~I~~ia~~~gi~livD~a~--a~~~~~~~l~~GaDi~v~ 207 (394)
T PRK07050 139 -----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVP-DVPAITAAARARGVVTAIDNTY--SAGLAFKPFEHGVDISVQ 207 (394)
T ss_pred -----CHHHHHHhcC---CCCeEEEEECCCCCCccHh-hHHHHHHHHHHcCCEEEEECCc--ccccccCHHHcCCeEEEE
Confidence 5678999997 889999999995 567776 9999999999999999999775 445567899999999999
Q ss_pred CccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
|++|+++ |+++.-+|.++++ +++.+.+.. ..+.+|...+ ++ -+|+...|.+++
T Consensus 208 S~tK~~~---g~~~~~gG~v~~~~~~~~~~~~~-------------~~~~~G~~~~-~~---------~a~l~lr~l~tl 261 (394)
T PRK07050 208 ALTKYQS---GGSDVLMGATITADAELHAKLKL-------------ARMRLGIGVS-AD---------DCSLVLRGLPSL 261 (394)
T ss_pred ECCceec---CCCCeeEEEEEECCHHHHHHHHH-------------HHHhcCCCCC-HH---------HHHHHHcCCCcH
Confidence 9999995 2233335666664 445443310 0011222221 11 346777888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeE------------EEEEecC--chhHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHE------------FIVDLRG--LKEELDRYCDALISIREEIA 931 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he------------~i~~~~~--~~~~ld~f~~~l~~i~~e~~ 931 (1016)
..+.+++.+||.+++++|+++ .+|.|||+.+++.|+ |.+.+++ ..++.++|++.|+.+ ....
T Consensus 262 ~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~-~~~~ 340 (394)
T PRK07050 262 QVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELF-AIGW 340 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCC-eecc
Confidence 999999999999999999974 678899987766555 4566655 347899999999977 4456
Q ss_pred HHhcCCCCCCCCccccCCCCC
Q 001769 932 QIENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 932 ~~~~g~~~~~~~~l~~ap~~~ 952 (1016)
++ | +.++|.. |.++
T Consensus 341 s~--G----~~~sl~~-~~~~ 354 (394)
T PRK07050 341 SW--G----GACSLAM-PYDV 354 (394)
T ss_pred cc--C----CccceEe-eCcc
Confidence 65 6 7899987 8765
No 104
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=2.1e-19 Score=207.57 Aligned_cols=264 Identities=21% Similarity=0.218 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc-ccHHH---HHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPAT---AAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg-~~~~~---a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.. +..++|..+..++ + ... +++++|+++...|+ ++... +...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g~~~~-~~~~sG~aai~~~-~---~~l-----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEGGHAG-FAFGSGMAAITAV-M---MLF-----SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHHH-H---HHh-----CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 45789999999998764 5567776544222 1 111 35789999998777 44332 3457999999875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.+. +.+....|..+|+|+++
T Consensus 122 -----~d~~~l~~ai~---~~tklV~le~P~NPtg~~~-dl~~I~~la~~~g~~lvvD~a~--~~~~~~~p~~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT-DIKKISTIAKEKGLLTIVDNTF--MTPYWQSPISLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCC--CccccCChhhhCCeEEE
Confidence 48999999998 889999999995 578886 9999999999999999999765 33444577889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|++|+|+.| ++-..|++++++ ++...+.. ....+|...+ + -.+|+...|.+.
T Consensus 191 ~S~sK~l~G~---~~~~~G~~v~~~~~l~~~~~~-------------~~~~~g~~~~-~---------~~a~l~~~~l~t 244 (377)
T PRK07671 191 HSATKYLGGH---SDVVAGLVVVNSPELAEDLHF-------------VQNSTGGILG-P---------QDSWLLLRGLKT 244 (377)
T ss_pred ecCcccccCC---ccceeEEEEeCcHHHHHHHHH-------------HHHhhcCCCC-H---------HHHHHHHcCcCh
Confidence 9999999522 112356676654 34333210 0011222221 1 145677778889
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+.+++.+||..++++|+++ ..|.|||+.+++.|++ .|++ +..+++.+|+++|+.+ ..+.+
T Consensus 245 l~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~f~~~l~l~-~~~~s 322 (377)
T PRK07671 245 LGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANKVLERLQYF-TLAES 322 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHHHHHhCCcc-eEccC
Confidence 9999999999999999999974 6899999999888873 3445 4567899999999977 34556
Q ss_pred HhcCCCCCCCCccccCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~ 952 (1016)
+ | +.++|..+|.++
T Consensus 323 ~--G----~~~sl~~~~~~~ 336 (377)
T PRK07671 323 L--G----AVESLISIPSQM 336 (377)
T ss_pred C--C----CCCeEeECCCcc
Confidence 5 6 789999999876
No 105
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.82 E-value=4.7e-18 Score=194.60 Aligned_cols=262 Identities=11% Similarity=0.100 Sum_probs=191.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc-cCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKK-KTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~-~~~g-d~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
....+.+.++++.+++++|++..++.+.+|+|.++++++.++... ..++ ++|+++..+||++...++.. +..|++++
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~ 116 (353)
T TIGR03235 38 HNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVT 116 (353)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEEE
Confidence 334567889999999999999888999999998888777665311 1134 78999999999999998764 45688988
Q ss_pred EeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEE
Q 001769 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1016)
Q Consensus 285 ~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivv 353 (1016)
.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|| ..+++|.+. +..++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD-~a~~~g~~~~~~~~~~~D~~~ 195 (353)
T TIGR03235 117 YLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVD-AAQVVGKITVDLSADRIDLIS 195 (353)
T ss_pred EEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEE-chhhcCCccccccccCCCEEE
Confidence 8764 34655 7778999999887 68999999999999999999999994 345666543 34578999999
Q ss_pred ecCccccccCCCCCcceEEEEeehhhhhc--CCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHH
Q 001769 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRM--MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (1016)
Q Consensus 354 gs~k~lg~P~g~GGP~~Gfl~~~~~l~~~--lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~A 431 (1016)
++++|+.+| |+.|+++++++.... +.+.+.| +. +..+.+.+|+|+ ..++++.+
T Consensus 196 ~s~~K~~gp-----~g~g~l~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~gt~~~---~~~~al~~ 250 (353)
T TIGR03235 196 CSGHKIYGP-----KGIGALVIRKRGKPKAPLKPIMFG------GG-----------QERGLRPGTLPV---HLIVGMGE 250 (353)
T ss_pred eehhhcCCC-----CceEEEEEccCcccccccCceeeC------CC-----------CcCccccCCCCh---HHHHHHHH
Confidence 999555434 357899999875432 3322222 10 112456788888 44555566
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--C-ccEEEEecCC--HHHHHHHHHHcCceee
Q 001769 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLR 500 (1016)
Q Consensus 432 a~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~--~-~~~v~i~~~~--~~~v~~~L~~~GI~~~ 500 (1016)
++- ++ .+|++++.+++.+++++++++|++.| ++++.++ . ...++|..++ +.++.+.|.+ ||.++
T Consensus 251 al~--~~-~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 251 AAE--IA-RRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred HHH--HH-HhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEE
Confidence 652 22 35889999999999999999999877 9887432 1 2245565555 7889999965 77765
No 106
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.82 E-value=5.2e-18 Score=195.79 Aligned_cols=284 Identities=17% Similarity=0.165 Sum_probs=192.8
Q ss_pred HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 205 ~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
..+|....+.++++.+|+++|++. +.+++|++.++.+++.++. +++|+|+++...|.+....+ +..|++++
T Consensus 45 ~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~---~~gd~Vl~~~~~h~s~~~~~----~~~g~~~~ 115 (370)
T TIGR02539 45 LDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALC---KEGDWVVLDGLAHYTSYVAA----ERAGLNVK 115 (370)
T ss_pred cccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhh---CCCCEEEECCcccHHHHHHH----HHcCCEEE
Confidence 456666778888899999999987 5678999999988888773 37899999999999887654 34577777
Q ss_pred EeC----------chhhhc-cC-------CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CC
Q 001769 285 VSD----------LKDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 344 (1016)
Q Consensus 285 ~vd----------~~~L~~-l~-------~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~p 344 (1016)
.++ +++|++ +. +++++|++++| |++|.+.|+++|+++||++|++++|| +.++.|.+. +.
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD-ea~~~g~~~~~~ 194 (370)
T TIGR02539 116 EVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN-CAYTVGRMPVSA 194 (370)
T ss_pred EEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE-CccccCCcCCCH
Confidence 654 345555 53 36788999998 57999999999999999999999994 566666544 23
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 345 g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
.++++|++++|. |+|+. ||| +||+++++++++.+...... |.+.. ...-.+|++.
T Consensus 195 ~~~~~di~v~s~sK~~~~----~g~-~G~l~~~~~~i~~l~~~~~~----------~~~~~------~~~~~~~~~~--- 250 (370)
T TIGR02539 195 KEIGADFIVGSGHKSMAA----SGP-CGVLGMSEEWEDIVLRKSRY----------SPVKE------VELLGCTSRG--- 250 (370)
T ss_pred HHcCCCEEEeeCcccccC----CCC-EEEEEECHHHHhhhcccccC----------Cccce------eeeecccccc---
Confidence 467899999998 77752 333 89999999988877321100 11100 0000122221
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC--CCCccEEEEecCC-----------HHHHHH
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-----------AHAIAS 490 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~--~~~~~~v~i~~~~-----------~~~v~~ 490 (1016)
.+..+.++++ ... .+-+++. .+..+++++|+++|+++| ++++. +...+.+.++.+. +..+.+
T Consensus 251 ~~~~~~~~al--~~~-~~~l~~~-~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T TIGR02539 251 APIVTMMASF--PHV-VERVKRW-DEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYE 325 (370)
T ss_pred cHHHHHHHHH--HHH-HHHHHHH-HHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHH
Confidence 1222333332 111 1222222 334556789999999998 88742 2222233344332 346999
Q ss_pred HHHHcCce-eecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 491 AAYKIEMN-LRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 491 ~L~~~GI~-~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.|.++||. ++.-.++.+|+++. .+|++|+++++++|.
T Consensus 326 ~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~ 363 (370)
T TIGR02539 326 ELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFE 363 (370)
T ss_pred HHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHH
Confidence 99999997 55423468999984 679999999999996
No 107
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.82 E-value=1.5e-18 Score=200.31 Aligned_cols=316 Identities=16% Similarity=0.151 Sum_probs=206.9
Q ss_pred CccccccCCCCCCCCChHHHHHHHHhCCCccc--ccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHH
Q 001769 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE 242 (1016)
Q Consensus 165 ~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t--~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~e 242 (1016)
...++|||....+...|+++. ++......+. ..+...+++..|..+.+.++++.+|+++|.+. +.++++|+.++.
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~ 85 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANL 85 (370)
T ss_pred eECCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHHHH
Confidence 346789999988777777764 5544311111 13445667889999999999999999999975 567777776665
Q ss_pred HHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cC------CCEeEEEEEcC-CCCeeecc
Q 001769 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KS------GDVCGVLVQYP-GTEGEVLD 314 (1016)
Q Consensus 243 A~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~------~~t~~V~v~~p-n~~G~i~d 314 (1016)
++...+. ++++.|+++..+|+++...++.. ....+.+.++|+++|++ ++ +++.+|++.++ |++|.+.|
T Consensus 86 ~~~~~~~---~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p 161 (370)
T PRK05937 86 GLCAHLS---SVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP 161 (370)
T ss_pred HHHHHhC---CCCCEEEEEhhhhHHHHHHHHHc-CCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC
Confidence 5443331 36788999999999999998753 23334455577787776 53 34666777776 68899999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cccc---eEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCC
Q 001769 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----ELGA---DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (1016)
Q Consensus 315 l~eI~~lah~~GalviV~a~~~alg~l~~pg-----~~Ga---Divvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpg 385 (1016)
+++|.++||++|++++| ++.++.|.+...+ .||+ |+++.+. |.|| ++|+|+++.++ ....+..
T Consensus 162 l~eI~~l~~~~~~~liv-Dea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~-~~~~~~~ 233 (370)
T PRK05937 162 LEQIIALSKKYHAHLIV-DEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE-VKQDLML 233 (370)
T ss_pred HHHHHHHHHHcCCEEEE-ECCccccccCCCCCchHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH-HHHHHHH
Confidence 99999999999999999 3566766554433 3553 3556665 6553 23456666543 2222100
Q ss_pred ceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC
Q 001769 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (1016)
Q Consensus 386 rivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G 465 (1016)
+..+.+++.++ |. ....++.+++ .++..+| +.+.+++.++.+++.+.|...+
T Consensus 234 ---------------------~~~~~~~s~~~-~~---~~~~a~~aal--~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~ 285 (370)
T PRK05937 234 ---------------------NSPPLRYSTGL-PP---HLLISIQVAY--DFLSQEG-ELARKQLFRLKEYFAQKFSSAA 285 (370)
T ss_pred ---------------------hCCCCeecCCC-CH---HHHHHHHHHH--HHHHhCc-HHHHHHHHHHHHHHHHhcCCCC
Confidence 00011222222 21 2333444444 4444455 4567888899999998886542
Q ss_pred CeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeecc---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 466 TVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 466 ~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~---~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
. .. ...+.+......++.+.|.++||.++.. ..+.+|+|++.+||++||++++++|..
T Consensus 286 -~----~~-~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 286 -P----GC-VQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred -C----CC-EEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 1 01 1123332212678999999999988643 246899999999999999999999963
No 108
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=1.4e-18 Score=203.60 Aligned_cols=278 Identities=19% Similarity=0.237 Sum_probs=197.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc-cH---HHHHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NP---ATAAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~-~~---~~a~~~G~~vv~v~~d 710 (1016)
.++++.+++++|.+. .+.+++|+++..++++++. .++++||++...|+. +. ..+...|++++.++.+
T Consensus 60 ~~le~~lA~l~g~~~-~v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~ 130 (418)
T TIGR01326 60 DVLEQRIAALEGGVA-ALAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD 130 (418)
T ss_pred HHHHHHHHHHhCCCe-EEEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC
Confidence 478999999999865 4667788776655554432 256789998876653 22 2356789999999862
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|++++
T Consensus 131 -----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~i~livD~t~~--~~~~~~~l~~g~Divv~ 199 (418)
T TIGR01326 131 -----DPEEFEKAID---ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHGVPLIVDNTFA--TPYLCRPIDHGADIVVH 199 (418)
T ss_pred -----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCc--hhhcCCchhcCCeEEEE
Confidence 8999999997 789999999985 678886 99999999999999999997753 34456778889999999
Q ss_pred CccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCC-CC-----------------CC-CcCCCCCCccCCccch
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGG-IP-----------------AP-EKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~-~~-----------------~r-e~~~~~g~i~s~~~G~ 849 (1016)
|+||+|+. .|..+|.++++ +.+.........-.... .| .+ +..+.+|...+ |+
T Consensus 200 S~sK~l~g----~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-p~-- 272 (418)
T TIGR01326 200 SATKYIGG----HGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALS-PF-- 272 (418)
T ss_pred CccccccC----CccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCC-HH--
Confidence 99999962 23445555554 33322211100000000 00 00 00112233221 22
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE-------------EEEecCch
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF-------------IVDLRGLK 913 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~-------------i~~~~~~~ 913 (1016)
-+|+...|.++|..+++++..||..++++|.++ -.|.|||+.+++.||. .|++++..
T Consensus 273 -------~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~~~~ 345 (418)
T TIGR01326 273 -------NAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIKGGR 345 (418)
T ss_pred -------HHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEecCCH
Confidence 467788899999999999999999999999974 5799999998888863 34455555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 914 EELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 914 ~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
+...+|+++|+.| ..+.++ | ..++|..+|.++.
T Consensus 346 ~~~~~f~~~l~l~-~~~~sl--G----~~~sl~~~~~~~~ 378 (418)
T TIGR01326 346 EAGKKFIDALKLA-SHLANV--G----DAKSLVIHPASTT 378 (418)
T ss_pred HHHHHHHHhCCcc-eecccc--C----CCCceeeCCCCCC
Confidence 6789999999987 455666 6 7899999999874
No 109
>PLN02242 methionine gamma-lyase
Probab=99.82 E-value=3.4e-19 Score=208.22 Aligned_cols=270 Identities=17% Similarity=0.176 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH-----HhCCcEEEEEc
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-----AMCGMKIVSVG 708 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a-----~~~G~~vv~v~ 708 (1016)
..++++.+++++|.+.+ +.+++|.++..++++++. +++++|+++...++.+...+ ...|++++.++
T Consensus 78 ~~~LE~~lA~l~g~~~~-l~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEGTEAA-YCTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 45789999999999875 456778776655554442 35789999988766554433 35798988887
Q ss_pred CCCCCCCCHHHHHHHHHcCCC-CEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcE
Q 001769 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~~-~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi 786 (1016)
. .|+++++++++ + +|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .....|..+|+|+
T Consensus 149 ~-----~d~e~l~~~i~---~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~gi~livDea~~---~~~~~~~~~g~di 216 (418)
T PLN02242 149 I-----TDLEAVKKAVV---PGKTKVLYFESISNPTLTVA-DIPELARIAHEKGVTVVVDNTFA---PMVLSPARLGADV 216 (418)
T ss_pred C-----CCHHHHHHhcC---cCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhCCEEEEECCCC---ccCCCHHHcCCcE
Confidence 6 38999999997 6 59999999995 688887 99999999999999999997652 2335677889999
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+++|++|+|+.+ |...+|+++++++++..+.....+ +....|...+ .-.+++..+|.+
T Consensus 217 vv~S~SK~l~g~---g~~~gG~iv~~~~li~~l~~~~~~---------~~~~~g~~~~----------~~~A~l~~~~l~ 274 (418)
T PLN02242 217 VVHSISKFISGG---ADIIAGAVCGPAELVNSMMDLHHG---------ALMLLGPTMN----------PKVAFELSERLP 274 (418)
T ss_pred EEEeCccccCCC---CCceEEEEEcCHHHHHHHHHHhhh---------hhhccCCCCC----------HHHHHHHHcCCC
Confidence 999999999622 333468888887665443210000 0001121111 124566667888
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEE---------------EEEecCchhHHHHHHHHHHHHH---
Q 001769 867 GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEF---------------IVDLRGLKEELDRYCDALISIR--- 927 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~---------------i~~~~~~~~~ld~f~~~l~~i~--- 927 (1016)
.+..+.++..+||.+++++|++ .++|.|||+++++.|++ .|+++ ..+...+|+++|+.+.
T Consensus 275 tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~-~~~~~~~f~~~l~~~~~~~ 353 (418)
T PLN02242 275 HLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD-TEERANRLMRYLQNSTQFG 353 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC-CHHHHHHHHHHhhcccccc
Confidence 8999999999999999999998 48999999988888763 23343 3567899999999662
Q ss_pred HHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 928 EEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 928 ~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
..+.++ | +.++|..+|.++.
T Consensus 354 ~~~~sl--G----~~~sl~~~p~~~~ 373 (418)
T PLN02242 354 FMAVSL--G----YYETLMSCSGSST 373 (418)
T ss_pred eeeecC--C----CCCceeeCCCccc
Confidence 224454 5 7899999998763
No 110
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.82 E-value=2.4e-18 Score=200.04 Aligned_cols=310 Identities=14% Similarity=0.145 Sum_probs=206.3
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|...++|||+..+|+...+++. ++.+ |.+.++ .++..-|+...+.++|+.+|+++|.+. +.++.+|++++.+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~-a~~~---~g~~~~--~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALE-SLSH---YGCGSC--GPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDGASTTSS 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHH-HHHH---hCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHH
Confidence 4456789999988877777764 5554 444443 344456777789999999999999985 7788888887777
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc----cC-----------CCEeEEEEEc
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY----KS-----------GDVCGVLVQY 305 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v---d~~~L~~----l~-----------~~t~~V~v~~ 305 (1016)
+++++. +++|+||+++..|++++..++. . +.+++++ |+++++. +. ++++.|++..
T Consensus 74 ~i~~l~---~~GD~Vl~~~~~h~s~~~~~~l-~---~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 74 TVAAFA---KRGDLLVVDRGVNEALLVGVSL-S---RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred HHHHhC---CCCCEEEEeccccHHHHHHHHH-c---CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 777762 3899999999999999988732 2 3344443 4444432 22 2577777776
Q ss_pred C-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC-----------CcccceEEEecC-ccccccCCCCCcceEE
Q 001769 306 P-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----------GELGADIVVGSA-QRFGVPMGYGGPHAAF 372 (1016)
Q Consensus 306 p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~p-----------g~~GaDivvgs~-k~lg~P~g~GGP~~Gf 372 (1016)
+ |+.|.+.|+++|.++||++|+++++ ++.++++.+... ...|+||++++. |.+| |.+|+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~liv-De~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-------~~gg~ 218 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLIL-DESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-------SVGGM 218 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEE-ECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-------ccCcE
Confidence 5 7889999999999999999999999 466676655331 134779999996 5443 44478
Q ss_pred EEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh--hHHHHHHHHHH-HHHhCcccHHHHHHH
Q 001769 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA--QALLANMAAMY-AVYHGPEGLKTIAQR 449 (1016)
Q Consensus 373 l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~--~~l~a~~Aa~y-~~~~g~~Gl~~ia~~ 449 (1016)
+.+++++++.+.. .+..+++++ ++..+ .|+.. +... .+ .+++.++
T Consensus 219 v~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~p~~~-~aa~~al~~~-~~-~~~~~~~ 266 (392)
T PLN03227 219 TVGSEEVVDHQRL-----------------------------SGSGYCFSASAPPFLA-KADATATAGE-LA-GPQLLNR 266 (392)
T ss_pred EecCHHHHHHHHH-----------------------------hCcCccccCCCCHHHH-HHHHHHHHHH-hc-CHHHHHH
Confidence 8778776544310 000111111 12111 22221 1111 11 2467788
Q ss_pred HHHHHHHHHHHHhcCCCeEEc----------CCCCccEEEEecCC------------HHHHHHHHHHcCceeec------
Q 001769 450 VHGLAGTFALGLKKLGTVEVQ----------GLPFFDTVKVKCAD------------AHAIASAAYKIEMNLRV------ 501 (1016)
Q Consensus 450 ~~~~a~~L~~~L~~~G~~~l~----------~~~~~~~v~i~~~~------------~~~v~~~L~~~GI~~~~------ 501 (1016)
+++++++|++.|++.+ +..+ .......+.|.+.+ ..++.+.|.++||.+..
T Consensus 267 l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~ 345 (392)
T PLN03227 267 LHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVK 345 (392)
T ss_pred HHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccC
Confidence 8999999999998643 3211 11111223333322 24888999999997742
Q ss_pred -----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 502 -----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 502 -----~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.++..+|++++..||++||++++++|..
T Consensus 346 ~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 346 KFLQLVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred CcCCCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 2367899999999999999999999964
No 111
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.82 E-value=5.9e-19 Score=205.65 Aligned_cols=269 Identities=19% Similarity=0.235 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.. +.+++|+++...++.++ . +++++||++...|+.... .+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g~~~~-i~~~sG~~Al~~~l~~l---l-----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEGGEAA-VALASGMGAITATLWTL---L-----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHH---c-----CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 45788999999998764 66778876553333322 1 367899999887764322 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|..+|+|+++
T Consensus 138 -----~d~~~l~~~i~---~~tklV~le~p~NPtG~~~-di~~I~~la~~~gi~lIvD~a~a--~~~~~~~l~~g~Di~v 206 (403)
T PRK07503 138 -----TDPAALKAAIS---DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAGAKVVVDNTYC--TPYLQRPLELGADLVV 206 (403)
T ss_pred -----CCHHHHHHhcC---ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhhCCCEEE
Confidence 38999999997 789999999985 678887 99999999999999999997763 3334567778999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
+|++|+|+.+ |+..+|+++.++++...+... +. ...+|...+ ++ -+++...|.+.|
T Consensus 207 ~S~tK~l~g~---gd~~gG~v~~~~~l~~~l~~~--~~---------~~~~g~~~s-~~---------~a~l~l~~L~tl 262 (403)
T PRK07503 207 HSATKYLGGH---GDITAGLVVGGKALADRIRLE--GL---------KDMTGAVMS-PF---------DAFLLMRGLKTL 262 (403)
T ss_pred ccccccccCC---CceeEEEEEcCHHHHHHHHhh--hH---------HhCcCCCCC-HH---------HHHHHHcCcchH
Confidence 9999999621 344578888777665544210 00 011222111 11 345666778888
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE----------E--EEecCchhHHHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF----------I--VDLRGLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~----------i--~~~~~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
..+.+++.+||..++++|+++ -.|.|||+.+++.|++ + +.+++..+...+|++.|+.+. ...++
T Consensus 263 ~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~-~~~sl 341 (403)
T PRK07503 263 ALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFA-RAVSL 341 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcce-eeccc
Confidence 889999999999999999985 4688999988888764 3 334445567889999999773 23344
Q ss_pred hcCCCCCCCCccccCCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~~ 953 (1016)
| +.++|..+|.++.
T Consensus 342 --G----~~~sl~~~~~~~~ 355 (403)
T PRK07503 342 --G----DAESLAQHPASMT 355 (403)
T ss_pred --C----CCCccCcCCCCCc
Confidence 4 7899999988773
No 112
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.81 E-value=1.2e-17 Score=192.35 Aligned_cols=320 Identities=14% Similarity=0.141 Sum_probs=212.7
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCC--ccEEEccchHHHHHHHHHH
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMC 247 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~--anasl~~~~Taa~eA~~~a 247 (1016)
+.+.| |..+++.+.+++... | ..++ ++ ..+.+.++++.+++++|.+. ..+.++.+||.+.++++.+
T Consensus 8 ~~~pg--P~~~~~~~~~a~~~~--~-~~~~---~~----~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~ 75 (368)
T PRK13479 8 LLTPG--PLTTSRTVREAMLRD--W-GSWD---DD----FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGS 75 (368)
T ss_pred eecCC--CCCCCHHHHHHhCCC--C-CCCC---hH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHh
Confidence 34677 556777776565543 3 1122 22 12467888999999999865 3466788999999988887
Q ss_pred hccccCCCCEEEEcCCCC-HHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCCeeecc
Q 001769 248 NNIQKGKKKTFIIASNCH-PQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLD 314 (1016)
Q Consensus 248 ~~~~~~~gd~Vlvs~~~H-ps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~--~~t~~V~v~~p-n~~G~i~d 314 (1016)
+.. ++++|++....+ +.. +...++..|++++.++. +++++ +. ++++.|++.+| |.+|.+.|
T Consensus 76 l~~---~~~~vlv~~~~~~~~~---~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 76 LVP---RDGKVLVPDNGAYGAR---IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred ccC---CCCeEEEEeCCchHHH---HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 742 577777765443 432 22335567888887654 33444 43 45677888888 57999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 315 YGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 315 l~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
+++|+++||++|++++|| ..+++|.. .+..++|+|++++++ |+|+ |.||+||+++++++++.+.....
T Consensus 150 ~~~i~~l~~~~~~~livD-a~~~~g~~~~~~~~~~~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~---- 219 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVD-AMSSFGAIPIDIAELGIDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSR---- 219 (368)
T ss_pred HHHHHHHHHHcCCEEEEE-cccccCCccccccccCceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCC----
Confidence 999999999999999995 44566543 234578999999998 6674 34567999999988877753211
Q ss_pred cCCCCcceeeecccccccccccc---cCCccchhhHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 393 DSSGKPALRVAMQTREQHIRRDK---ATSNICTAQALLANMAAMYAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqhiRRek---aTsnicT~~~l~a~~Aa~y~~~~g-~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.+.+++........+.. -|.|+ ..++++.+++ .++. ..|++++.+++.++.+++++.|+++| ++
T Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~t~~~---~~~~~l~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 287 (368)
T PRK13479 220 ------SLSLDLYDQWAYMEKTGQWRFTPPT---HVVAAFYQAL--LELEEEGGVPARGARYANNQRTLVAGMRALG-FE 287 (368)
T ss_pred ------CeeecHHHHHhhhcccCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 12222110000000101 14444 3444555554 3332 33688889999999999999999997 87
Q ss_pred EcCCCC--cc-EEEEecCC-----HHHHHHHHHHcCceeeccc---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 469 VQGLPF--FD-TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 469 l~~~~~--~~-~v~i~~~~-----~~~v~~~L~~~GI~~~~~~---~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++.++. .+ .+.+..+. ..++.++|.++||.++... .+.+|++..-+++.+|+++++++|..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAE 359 (368)
T ss_pred ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 753221 11 23344321 5789999999999986531 35899998888999999999999963
No 113
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.81 E-value=9.5e-18 Score=191.26 Aligned_cols=317 Identities=14% Similarity=0.129 Sum_probs=208.4
Q ss_pred CCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCc--cEEEccchHHHHHHHHHHhccccCC
Q 001769 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNNIQKGK 254 (1016)
Q Consensus 177 ~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~a--nasl~~~~Taa~eA~~~a~~~~~~~ 254 (1016)
|..+++.+.+++.. .|.. +.++ ..+.+.++++++++++|++.. .+.++.+||.++++++.++. . +
T Consensus 7 p~~~~~~~~~~~~~--~~~~----~~~~----~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~--~ 73 (355)
T TIGR03301 7 PLSTSATVRDAMLV--DWCH----WDSE----FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-P--R 73 (355)
T ss_pred CCCCCHHHHHHhhh--hccC----CCHH----HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-C--C
Confidence 55677777655554 2211 1112 236677888999999999864 45578899999888887763 2 4
Q ss_pred CCE-EEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC--CCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001769 255 KKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1016)
Q Consensus 255 gd~-Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~--~~t~~V~v~~p-n~~G~i~dl~eI~~l 321 (1016)
+++ |+++...|++... ..++..|++++.++. +++++ +. ++++.|++.++ |.+|.+.|+++|+++
T Consensus 74 ~~~vi~~~~~~~~~~~~---~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 74 DGKLLVLINGAYGERLA---KICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CCeEEEECCCchhhHHH---HHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHH
Confidence 555 5566667776332 224456877777653 34555 43 45666766665 678999999999999
Q ss_pred HHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcc
Q 001769 322 AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (1016)
Q Consensus 322 ah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~ 399 (1016)
||++|++++||+ .+++|... +..++|+|++++++ |+|+ |+||+||+++++++++.+.++. ..
T Consensus 151 ~~~~~~~livD~-~~s~g~~~~~~~~~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~----------~~ 214 (355)
T TIGR03301 151 ARSHGAVLIVDA-MSSFGAIPIDIEELDVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNA----------RS 214 (355)
T ss_pred HHHcCCEEEEEe-ccccCCcccchhhcCccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCC----------CC
Confidence 999999999953 55666432 34678999999998 6664 4466899999999887764321 11
Q ss_pred eeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCC-cc-
Q 001769 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGLPF-FD- 476 (1016)
Q Consensus 400 ~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~G-l~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~-~~- 476 (1016)
+.+.+.+--+...+...+.+..+...+.++.+++ ..+..+| ++++.++..++.+++++.|+++| +++..++. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~~~ 291 (355)
T TIGR03301 215 LYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQAL--EELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQSP 291 (355)
T ss_pred ceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHH--HHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCCCC
Confidence 2222211000111111222212223444444444 4444455 88899999999999999999987 87653221 11
Q ss_pred -EEEEecCC-----HHHHHHHHHHcCceeeccc---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 477 -TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 477 -~v~i~~~~-----~~~v~~~L~~~GI~~~~~~---~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+.+..+. ..++.++|.++||.+.... .+.+|++++.+++++|++++++.|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~ 352 (355)
T TIGR03301 292 IIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIK 352 (355)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHH
Confidence 23444432 4689999999999886532 3689999999999999999999986
No 114
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=2.2e-18 Score=203.88 Aligned_cols=284 Identities=12% Similarity=0.075 Sum_probs=192.4
Q ss_pred HHHHHHH-HHHHHHHHcCCCCccEEEc---cchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhc------C
Q 001769 209 RLESLLN-FQTMIADLTGLPMSNASLL---DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD------G 278 (1016)
Q Consensus 209 ~le~i~e-~q~~iA~L~G~~~anasl~---~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~------~ 278 (1016)
..+.+.+ .++.+++++|++.++.... .+||.++.+++.++ + +++|+|++++.+|++....++.+.+ .
T Consensus 77 ~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-~--~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~ 153 (452)
T PTZ00094 77 VVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-L--QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATS 153 (452)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-c--CCCCEEEecccccCCcccccccccccccccce
Confidence 3455553 7789999999987653232 67888888877777 3 3789999999999998877643221 1
Q ss_pred CCeEEEE--------eCchhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-----C
Q 001769 279 FDIKVVV--------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-----P 343 (1016)
Q Consensus 279 ~gi~v~~--------vd~~~L~~-l~-~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-----~ 343 (1016)
.++++.. +|+++|++ +. .+++.|++.++ .+|.+.|+++|+++||++|++++|| ..+++|.+. .
T Consensus 154 ~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s-~~g~~~di~~I~~i~~~~ga~l~vD-aaq~~G~i~~~~~~~ 231 (452)
T PTZ00094 154 IYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGAS-AYPRDIDYKRFREICDSVGAYLMAD-IAHTSGLVAAGVLPS 231 (452)
T ss_pred eeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCC-CCCCccCHHHHHHHHHHcCCEEEEe-ccchhccccCCCCCC
Confidence 1233332 34566666 53 24566666544 5999999999999999999999994 355666552 2
Q ss_pred CCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 344 pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
+. .|+|++++|+ |+|++| .+|++++++++.+.+..++- ...| + .. .|+.+.
T Consensus 232 ~~-~~~D~l~~S~hK~l~GP------~Gg~l~~~~~~~~~l~~~~~--------~~~~-----p-----~~-~G~~~~-- 283 (452)
T PTZ00094 232 PF-PYADVVTTTTHKSLRGP------RSGLIFYRKKVKPDIENKIN--------EAVF-----P-----GL-QGGPHN-- 283 (452)
T ss_pred CC-CCCcEEEcCCccCCCCC------CceEEEEecccchHHHHhhc--------cccC-----C-----CC-CCCchH--
Confidence 22 3899999999 667544 44788888765443321110 0000 0 01 234443
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---CCccEEEEecCC--HHHHHHHHHHcCc
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD--AHAIASAAYKIEM 497 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~---~~~~~v~i~~~~--~~~v~~~L~~~GI 497 (1016)
..+.++.+++ .++...+.+++++++.+++++|++.|++.| +++... .....+.+..++ ..++.+.|.++||
T Consensus 284 -~~iaal~~al--~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 359 (452)
T PTZ00094 284 -HQIAAIAVQL--KEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNI 359 (452)
T ss_pred -HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCc
Confidence 3444555554 555556888999999999999999998887 888642 222234444444 6789999988899
Q ss_pred eeec---------ccCCeEEEEeccCCC----HHHHHHHHHHHhC
Q 001769 498 NLRV---------VDSNTVTASFDETTT----LEDVDKLFIVFAG 529 (1016)
Q Consensus 498 ~~~~---------~~~~~lris~te~~t----~edid~ll~aL~~ 529 (1016)
.+.. ..++.||+|++++|| ++|+++++++|..
T Consensus 360 ~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 360 SVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred EEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 8842 124789999999887 9999999999963
No 115
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.81 E-value=8.5e-18 Score=202.01 Aligned_cols=350 Identities=15% Similarity=0.156 Sum_probs=220.9
Q ss_pred CHHHHHHHHHHHhccccCCCccc-ccccc-ccCCCChhhhhcccccccccccCCCC-CchhhhhHHHHHHHHHHHHHHHh
Q 001769 569 TEHELLRYIHLLQSKELSLCHSM-IPLGS-CTMKLNATTEMMPVTWPSFANIHPFA-PADQAQGYQEMFNNLGEWLCTIT 645 (1016)
Q Consensus 569 sE~e~~r~l~~l~~~n~~~~~~~-i~LGs-~t~~~~~~~~~~~~~~~~f~~~~P~~-p~e~~qG~~e~~~el~~~laeL~ 645 (1016)
+-.++++.+.+.-.++.....+. -++|+ +++...+..-.... ... |+|.. ..|.+++..++..++.+|+|+++
T Consensus 61 ~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~paila~~~--a~~--~N~n~~~~e~SP~~t~lE~~vi~~la~l~ 136 (608)
T TIGR03811 61 NMKDVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAILAYNY--AML--WNGNNVAYESSPATSQMEEEVGKEFATLM 136 (608)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHHHHHHH--HHH--hCCCCCccccCchHHHHHHHHHHHHHHHh
Confidence 56778888877554442222334 45775 22222222111100 011 22221 12678999999999999999999
Q ss_pred CCCce-eeecCChHHHHHHHHHHHHHHHH-----hcCC------------------------------------------
Q 001769 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHK-----ARGD------------------------------------------ 677 (1016)
Q Consensus 646 G~~~~-~l~~~sGa~ae~a~l~air~~~~-----~~g~------------------------------------------ 677 (1016)
|++.. ..++++|+.+++.++.++|.... ....
T Consensus 137 G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g 216 (608)
T TIGR03811 137 GYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSG 216 (608)
T ss_pred CCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccc
Confidence 99864 35677888899888888886320 0000
Q ss_pred --CCC-CEEEEcCCCccccHHHHHhCCc---EEEEEcCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcCC-CCccccc
Q 001769 678 --HHR-NVCIIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEE 747 (1016)
Q Consensus 678 --~~~-~~Vlv~~saHg~~~~~a~~~G~---~vv~v~~d~~g~iD~~~L~~~i~~~---~~~t~~v~i~~Pn-~~G~i~~ 747 (1016)
..+ .++++|..+|.+..+.+.++|+ .++.||+|+++++|+++|+++|++. +..+.+|+.+.++ .+|.||
T Consensus 217 ~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiD- 295 (608)
T TIGR03811 217 KDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVD- 295 (608)
T ss_pred cccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccC-
Confidence 001 1689999999999999999999 5999999999999999999999631 2346778888876 589999
Q ss_pred cHHHHHHHH---HHcCc--EEEEEccccccc-cCcCC------C------------------------------CccCCc
Q 001769 748 GIDEICKII---HDNGG--QVYMDGANMNAQ-VGLTS------P------------------------------GYIGAD 785 (1016)
Q Consensus 748 di~~I~~ia---~~~g~--lv~vDga~~~a~-~~l~~------p------------------------------g~~GaD 785 (1016)
||++|+++| +++|+ ++|||||..-.. ..+.. | +-.++|
T Consensus 296 pl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~AD 375 (608)
T TIGR03811 296 GIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAE 375 (608)
T ss_pred CHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCce
Confidence 899999999 67887 699998753110 00111 0 224699
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEccc-ccccC---CCCccccCCCCCCCCcCCCCCCccCCccchh--hHHHHHHHH
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFL---PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA--LILPISYTY 859 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~-l~~~l---pg~~~g~~g~~~~re~~~~~g~i~s~~~G~a--~~~~~a~a~ 859 (1016)
.++.+.||++.+|++ .|.+++|+. +.+.+ +..+... +. +.....+.. ...|+. ..+++.|+.
T Consensus 376 SItvDpHK~g~~Py~-----~G~ll~Rd~~~~~~~~~~a~Yl~~~-~~----~~p~~~g~~--~legSR~ga~AlklW~~ 443 (608)
T TIGR03811 376 SVTIDPHKMGYIPYS-----AGGIVIQDIRMRDVISYFATYVFEK-GA----DIPALLGAY--ILEGSKAGATAASVWAA 443 (608)
T ss_pred EEEeCcccccccCCC-----eEEEEEeCHHHHHHHhcCcchhccc-cc----cCccccccc--ceecCCccHHHHHHHHH
Confidence 999999999988874 457888863 21111 1111000 00 000001110 122332 346778999
Q ss_pred HHHh--ChhhHHHHHHHHHHHHHHHHHHHhcc-CCccccC-----CCCceeeEEEEEecCc-hhHHHHHHHHHHHHHHHH
Q 001769 860 IAMM--GSKGLTEASKIAILNANYMAKRLEKH-YPILFRG-----VNGTVAHEFIVDLRGL-KEELDRYCDALISIREEI 930 (1016)
Q Consensus 860 l~~l--G~eGl~~~~~~~~~nA~yla~~L~~~-~~v~y~g-----~~~~~~he~i~~~~~~-~~~ld~f~~~l~~i~~e~ 930 (1016)
++.+ |.+|+.++.++++++|+++.+.|.+. ++|.-+. ...+.++-+++++.+. ..++....+..+.|.+..
T Consensus 444 lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~ 523 (608)
T TIGR03811 444 HKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYA 523 (608)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhh
Confidence 9998 99999999999999999999999872 2221100 0234556666776532 234555555556664443
Q ss_pred HHHhcC
Q 001769 931 AQIENG 936 (1016)
Q Consensus 931 ~~~~~g 936 (1016)
++..|
T Consensus 524 -~~~~g 528 (608)
T TIGR03811 524 -SYVKG 528 (608)
T ss_pred -ccccC
Confidence 33344
No 116
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.81 E-value=1.8e-18 Score=201.79 Aligned_cols=314 Identities=14% Similarity=0.143 Sum_probs=204.6
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|...++|+|.+.+|..+.+.+. .+.. .+ +..+ .+....|..+...++++.+|+++|.+. +.++.+|+.++++
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~-~~~~-~~--~~~~--~s~~~~g~~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~ 120 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHE-TLDK-YG--AGAG--GTRNISGTNIPHVELEAELADLHGKES--ALVFTSGYVANDA 120 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHH-HHHH-cC--CCCc--chhhhhCCcHHHHHHHHHHHHHhCCCe--EEEECchHHHHHH
Confidence 3446789999987766665553 4432 11 2111 234455666778889999999999764 7788889988887
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-cC----CCEeEEEEEcC-CCCeeecc
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----GDVCGVLVQYP-GTEGEVLD 314 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v---d~~~L~~-l~----~~t~~V~v~~p-n~~G~i~d 314 (1016)
++.++... .+++.|+.+...|+++...++. .|+++..+ |++++++ ++ +++++|++.+| |++|.+.|
T Consensus 121 ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~ 195 (402)
T TIGR01821 121 TLATLAKI-IPGCVIFSDELNHASMIEGIRH----SGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP 195 (402)
T ss_pred HHHHhhCC-CCCCEEEEcchHhHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 76654321 1567788888899999988753 35555443 4456655 32 35788888887 68999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCCCCCc---------ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCC
Q 001769 315 YGDFIKNAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1016)
Q Consensus 315 l~eI~~lah~~GalviV~a~~~alg~l~~pg~---------~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lp 384 (1016)
+++|.++|+++|++++| ++.+++|++.+.+. ..+||++++. |.||.+ | ||+++++++++.+.
T Consensus 196 l~~i~~l~~~~~~~liv-Dea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~i~~~~~~~~~l~ 267 (402)
T TIGR01821 196 IEEICDLADKYGALTYL-DEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV---G----GYIAASRKLIDAIR 267 (402)
T ss_pred HHHHHHHHHHcCCEEEE-eCcccccccCCCCCccchhccCCCCCeEEEEechhhhccC---C----ceeecCHHHHHHHH
Confidence 99999999999999999 35666555433221 1368998887 888642 2 68888877766551
Q ss_pred CceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001769 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1016)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~ 464 (1016)
.. .+.|..+ ++.|. ....+..+++ .++... +++.++..++.+++++.|+++
T Consensus 268 ~~----------~~~~~~t------------~~~~~---~~~aaa~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 268 SY----------APGFIFT------------TSLPP---AIAAGATASI--RHLKES--QDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred Hh----------CcCceec------------CcCCH---HHHHHHHHHH--HHhhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 00 0001100 00110 1122222333 333222 556667778999999999998
Q ss_pred CCeEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~-~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
| ++++.+. .+.+.+.++. +.++.+.|.+ +||.++.. ..+.+|++++.++|++|+++++++|..
T Consensus 319 g-~~~~~~~-~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 319 G-IPVIPNP-SHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred C-CCcCCCC-CCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7 7765321 1123333332 6789999875 59988653 125799999999999999999999963
No 117
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.81 E-value=1.2e-17 Score=193.90 Aligned_cols=284 Identities=17% Similarity=0.125 Sum_probs=193.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
.+....+.++++.+|+++|++. +.+++|+|.++.+++.++. ++|++|++++..|++....++ ..|++++.+
T Consensus 59 ~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l~---~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v 129 (387)
T PRK09331 59 QIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSLC---KKGDYVVLDGLAHYTSYVAAE----RAGLNVREV 129 (387)
T ss_pred cccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHhc---CCCCEEEECCCchHHHHHHHH----HcCCEEEEE
Confidence 3445578899999999999975 7788999988888777763 379999999999999987653 358888776
Q ss_pred Cc----------hhhhc-cC-------CCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCc
Q 001769 287 DL----------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGE 346 (1016)
Q Consensus 287 d~----------~~L~~-l~-------~~t~~V~v~~pn-~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~ 346 (1016)
+. +++++ +. +++++|++++|+ .+|.+.|+++|+++||++|++++|+ ..+++|.++ +..+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD-~a~~~g~~~~~~~~ 208 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLN-GAYTVGRMPVDGKK 208 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEE-CCcccCCcCCCHHH
Confidence 54 33444 43 368999999985 5999999999999999999999994 456776543 3457
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhH
Q 001769 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1016)
Q Consensus 347 ~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~ 425 (1016)
+|+|++++++ |+|+. +|++||+++++++++.+... .+.|... . .....+|++. .+
T Consensus 209 ~g~D~~~~s~~K~l~~-----~~~~G~l~~~~~~i~~~~~~----------~~~~~~~-----~-~~~~~~~~~~---~~ 264 (387)
T PRK09331 209 LGADFIVGSGHKSMAA-----SAPSGVLATTEEYADKVFRT----------SRKFGVK-----E-VELLGCTLRG---AP 264 (387)
T ss_pred cCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhcccc----------cCCCccc-----c-eeeeceecCc---hH
Confidence 8999999999 66653 34679999999887765211 0111100 0 0000112211 23
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEEcCC-CC-ccEEEEecCC-----------HHHHHHH
Q 001769 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PF-FDTVKVKCAD-----------AHAIASA 491 (1016)
Q Consensus 426 l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G~~~l~~~-~~-~~~v~i~~~~-----------~~~v~~~ 491 (1016)
.+++++++. ..- +-+ +..++.+++++++++.|+++ | ++++.. +. .+.+.+..+. +.++.+.
T Consensus 265 ~~~~~aal~--~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
T PRK09331 265 LVTLMASFP--HVV-ERV-KRWDEEVKKARWFVDELEKIEG-FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEE 339 (387)
T ss_pred HHHHHHHHH--HHH-HHH-HHHHHHHHHHHHHHHHHhcCCC-EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHH
Confidence 344444441 111 112 23455678899999999999 6 998732 11 1112233221 3569999
Q ss_pred HHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 492 L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
|.++||.......+.++...+..+|++|+++++++|+.
T Consensus 340 L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~ 377 (387)
T PRK09331 340 LKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKE 377 (387)
T ss_pred HHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHH
Confidence 99999984333345666666666899999999999963
No 118
>PLN02651 cysteine desulfurase
Probab=99.81 E-value=1e-17 Score=192.73 Aligned_cols=241 Identities=12% Similarity=0.139 Sum_probs=171.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCcee-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH---HhCCcE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMK 703 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~~~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a---~~~G~~ 703 (1016)
....+.+.++++.+++++|.+... ++.++|+++...++.++.... ..++++|+++...|+++.... ...|++
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~----~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~ 114 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFY----KDKKKHVITTQTEHKCVLDSCRHLQQEGFE 114 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhc----cCCCCEEEEcccccHHHHHHHHHHHhcCCE
Confidence 345677889999999999998544 444455555433333332211 125679999999998765442 357999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
++.++++++|.+|+++++++|+ ++|++|+++++ |.+|.+. |+++|+++||++|++++||+++..+... ..+.++
T Consensus 115 v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~-~l~~I~~~~~~~g~~~~vD~a~~~g~~~-~~~~~~ 189 (364)
T PLN02651 115 VTYLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQ-PVEEIGELCREKKVLFHTDAAQAVGKIP-VDVDDL 189 (364)
T ss_pred EEEEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceecc-cHHHHHHHHHHcCCEEEEEcchhhCCcc-cCcccC
Confidence 9999998889999999999998 78999999987 4789998 8999999999999999999998755433 356789
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~ 862 (1016)
|+|++++|+||++ |++|+|++++++++...+.....++ + .. +..+.+|.++. ....+..|.-++..
T Consensus 190 ~~D~~~~s~hK~~------gp~G~g~l~v~~~~~~~l~p~~~g~-~-~~-~~~~~GT~~~~-----~~~~l~~al~~~~~ 255 (364)
T PLN02651 190 GVDLMSISGHKIY------GPKGVGALYVRRRPRVRLEPLMSGG-G-QE-RGRRSGTENTP-----LVVGLGAACELAMK 255 (364)
T ss_pred CCCEEEechhhhC------CCCceEEEEEcCCCCCCCCccccCC-C-cc-CCccCCCccHH-----HHHHHHHHHHHHHH
Confidence 9999999999973 4458999999987766664444332 1 11 11123333332 12333344444432
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhc---cCCcccc
Q 001769 863 MGSKGLTEASKIAILNANYMAKRLEK---HYPILFR 895 (1016)
Q Consensus 863 lG~eGl~~~~~~~~~nA~yla~~L~~---~~~v~y~ 895 (1016)
+...+.++...+++++.++|++ ++++..|
T Consensus 256 ----~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~ 287 (364)
T PLN02651 256 ----EMDYDEKHMKALRERLLNGLRAKLGGVRVNGP 287 (364)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence 3477788999999999999975 4566543
No 119
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=8.4e-19 Score=203.56 Aligned_cols=264 Identities=17% Similarity=0.192 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc-cH---HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NP---ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~-~~---~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+. .+..++|..+..+++ . .. +++++||+++..|+. +. ..+...|++++.++.
T Consensus 56 ~~~le~~lA~l~g~~~-~v~~~sG~~ai~~~l---~-~l-----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELEGGTK-GFAFASGMAAISTAF---L-LL-----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHhCCCC-eEEECCHHHHHHHHH---H-Hh-----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 4578899999999885 466678866543332 2 11 257899999988874 32 234568999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+....|.++|+|+++
T Consensus 126 -----~d~~~l~~~l~---~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g~~vvvD~a~~--~~~~~~~~~~g~Divv 194 (390)
T PRK08064 126 -----TNLEEVAQNIK---PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIGCLTFVDNTFL--TPLLQKPLDLGADVVL 194 (390)
T ss_pred -----CCHHHHHHhcC---CCceEEEEECCCCCCcEec-cHHHHHHHHHHcCCEEEEECCCC--cccccCchhhCCcEEE
Confidence 38999999997 789999999996 689987 99999999999999999997753 3334567789999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
.|+||+|+.| +|..+|+++++. ++.+.+... ....|.+.+ ++ .+|+...|.+.
T Consensus 195 ~S~tK~~~G~---~~~laG~~v~~~~~~~~~l~~~-------------~~~~g~~~~-~~---------~a~l~~~gl~t 248 (390)
T PRK08064 195 HSATKFLAGH---SDVLAGLAVVKDEELAQKLYFL-------------QNSFGAVLG-VQ---------DCWLVLRGLKT 248 (390)
T ss_pred eecceeccCC---ccceeEEEEeCCHHHHHHHHHH-------------HHhcCCCCC-HH---------HHHHHHcccCc
Confidence 9999999622 222357777764 444433110 001122111 11 34456678888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE----------E--EEecCchhHHHHHHHHHHHHHHHHHH
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF----------I--VDLRGLKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~----------i--~~~~~~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
|..+.+++..|+..++++|+++ .+|.|||+++++.|++ + |++++ .+++.+|+|+|+.+ ..+.+
T Consensus 249 l~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~f~~~l~l~-~~~~s 326 (390)
T PRK08064 249 LHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EEAVRQFVSHVKLP-VFAVS 326 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-HHHHHHHHHhCCcc-eEccc
Confidence 8999999999999999999974 6899999988877774 3 34443 56789999999876 33444
Q ss_pred HhcCCCCCCCCccccCCCCC
Q 001769 933 IENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 933 ~~~g~~~~~~~~l~~ap~~~ 952 (1016)
+ | +.++|..+|.++
T Consensus 327 ~--G----~~~sl~~~~~~~ 340 (390)
T PRK08064 327 L--G----AVESILSYPAKM 340 (390)
T ss_pred C--C----CCcceeECCccc
Confidence 4 6 789999988766
No 120
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.81 E-value=5.7e-18 Score=181.74 Aligned_cols=306 Identities=15% Similarity=0.119 Sum_probs=222.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHH-HhccccCCCCEEEEcC-CCCHHHHHHHHHhhcCCC--eEE
Q 001769 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFD--IKV 283 (1016)
Q Consensus 208 G~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~-a~~~~~~~gd~Vlvs~-~~Hps~~~~l~~~a~~~g--i~v 283 (1016)
.+...=..+-..+|-|.|+...++...|+.+..+.-.+. +++.. ++++|||++ ..+|+-..+....++-.+ .++
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~--~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~ 150 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQ--EGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDL 150 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccC--CCceEEeecCCCCCcchhhhcchhhhhcccccc
Confidence 333333344568999999998889888888766555544 34433 577777777 688988887765554444 233
Q ss_pred EE-eCchhhhc-cCCCEeEEEEEcCCC-CeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccc
Q 001769 284 VV-SDLKDIDY-KSGDVCGVLVQYPGT-EGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRF 359 (1016)
Q Consensus 284 ~~-vd~~~L~~-l~~~t~~V~v~~pn~-~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~l 359 (1016)
.. +.+.+++. +++|++.|++++.|+ +|...|+.+|.++||++|++++.+ -.++.|.+. .-..+|+|+++++++++
T Consensus 151 ~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wD-LAHsaGavp~~Lh~~gaDfaigcsyKY 229 (407)
T COG3844 151 EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWD-LAHSAGAVPVDLHAAGADFAIGCSYKY 229 (407)
T ss_pred eeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEee-hhcccCCcceeecccCCCeeeeeecee
Confidence 32 33567777 889999999999885 799999999999999999999883 345666553 34789999999999554
Q ss_pred cccCCCCCcce-EEEEeehhhhhcCCCceEee-eecCCCCcceeeecc-cccccccccccCCccchhhHHHHHHHHH-HH
Q 001769 360 GVPMGYGGPHA-AFLATSQEYKRMMPGRIVGV-SIDSSGKPALRVAMQ-TREQHIRRDKATSNICTAQALLANMAAM-YA 435 (1016)
Q Consensus 360 g~P~g~GGP~~-Gfl~~~~~l~~~lpgrivG~-s~d~~g~~~~~l~lq-treqhiRRekaTsnicT~~~l~a~~Aa~-y~ 435 (1016)
- .||||+ +|+++.+++.+..-+++.|| ..+ ++ |.|.-. +--.+++ .+.|++|..+.+.+-- -+
T Consensus 230 L----NgGPGapa~l~v~~~h~e~~~~~lsgW~gha---~p-f~m~~~y~p~~ga~-----rf~~gt~~V~s~aal~~aL 296 (407)
T COG3844 230 L----NGGPGAPAGLFVAPRHRERSWPPLSGWWGHA---RP-FAMEEVYAPGPGAR-----RFLCGTQPVLSLAALEGAL 296 (407)
T ss_pred c----cCCCCCceeEEeccccccccccccccccCCC---Cc-chhhhccCcCcccc-----ceeeCCcchhhhHHHhhhh
Confidence 2 478876 99999998887777788887 322 22 444311 1113343 3567777766554322 14
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHHHhcC-C--CeEEcCC----CCccEEEEecCCHHHHHHHHHHcCceeecccCCeEE
Q 001769 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKL-G--TVEVQGL----PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVT 508 (1016)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G--~~~l~~~----~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~~~~lr 508 (1016)
......+|.+++++...++.|+.+.++.. + ++++..+ ..-..|++..+.+.+|.+.|.++||......++.+|
T Consensus 297 Difa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P~vlR 376 (407)
T COG3844 297 DIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREPDVLR 376 (407)
T ss_pred hhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCCCeee
Confidence 66677889999999999999999999875 2 2666643 223358888888999999999999987766789999
Q ss_pred EEecc-CCCHHHHHHHHHHHhC
Q 001769 509 ASFDE-TTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 509 is~te-~~t~edid~ll~aL~~ 529 (1016)
+.+++ |++.+|+-.-+++|.+
T Consensus 377 fgftPlY~~~~DVw~AV~~L~e 398 (407)
T COG3844 377 FGFTPLYVSFVDVWDAVDALEE 398 (407)
T ss_pred ecCccceechhHHHHHHHHHHH
Confidence 99998 7999999888888753
No 121
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.81 E-value=8.9e-18 Score=193.15 Aligned_cols=326 Identities=13% Similarity=0.037 Sum_probs=218.4
Q ss_pred CCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCc-cEEEc-cchHHHHHHHHHHh
Q 001769 172 GMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLL-DEGTAAAEAMAMCN 248 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~-~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~a-nasl~-~~~Taa~eA~~~a~ 248 (1016)
+.| |..+|+.+.+++.+.. +.+- .....++. .+.+.+.++.+++|+|++.. ++.++ .+||.++++++.++
T Consensus 8 ~pG--P~~~~~~v~~a~~~~~~~~~~-~~hr~~~f----~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l 80 (361)
T TIGR01366 8 GSG--PSKVRLEQLQALTTTAASLFG-TSHRQAPV----KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL 80 (361)
T ss_pred cCC--CcCCCHHHHHHHHhcCccccc-cCcCChHH----HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence 455 6678888876655321 1000 11223332 36788889999999998543 57775 55999999988776
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---hhhc-cCCCEeEEEEEc-CCCCeeeccHHHHHHHHH
Q 001769 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DIDY-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAH 323 (1016)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~L~~-l~~~t~~V~v~~-pn~~G~i~dl~eI~~lah 323 (1016)
- .++.++++...|.+....+-.++...+ ++.+++.+ .++. ++++++.|++++ +|.+|.+.|+++| +|
T Consensus 81 ~----~~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~ 152 (361)
T TIGR01366 81 I----EKKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EG 152 (361)
T ss_pred c----cccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cc
Confidence 2 134556667888776666544332223 34444432 3333 567899998875 6899999999998 58
Q ss_pred hCCcEEEEEeccccccCCC-CCCcccceEEEecCcc-ccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCccee
Q 001769 324 ANGVKVVMATDLLALTILK-PPGELGADIVVGSAQR-FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 401 (1016)
Q Consensus 324 ~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~-lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~ 401 (1016)
++|++++||+ ..++|... +.. .+|++++++|| ||.| |+++++++++++++++.+...|.. +.+ +.
T Consensus 153 ~~g~~~iVDa-vqs~g~~~idv~--~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~----~~p-~~ 219 (361)
T TIGR01366 153 SDDALVVIDA-TSGAGGLPVDIA--ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGR----WVP-EF 219 (361)
T ss_pred cCCCeEEEEc-CccccCCCCCHH--HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCC----CCc-hh
Confidence 9999999943 23444432 222 28999999944 4433 257888999998877754333210 111 22
Q ss_pred eecccccccccccccCCccchhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CC--Cc--
Q 001769 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FF-- 475 (1016)
Q Consensus 402 l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~-~~--~~-- 475 (1016)
+++... ...+.+.+|.|......++++.+++ .++..+ |++.+.+|..+++++++++|.++++++++. .. ..
T Consensus 220 ~d~~~~-~~~~~~~~t~~tp~i~~i~~l~~al--~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~ 296 (361)
T TIGR01366 220 LSLPTA-VDNSLKNQTYNTPAIATLALLAEQI--DWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQV 296 (361)
T ss_pred hhHHHH-HhccccCCCCCCchHHHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccc
Confidence 333221 1223467888887778888888887 566666 699999999999999999999997456552 11 11
Q ss_pred -cEEEEecCC--HHHHHHHHHHcCceeec----ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 476 -DTVKVKCAD--AHAIASAAYKIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 476 -~~v~i~~~~--~~~v~~~L~~~GI~~~~----~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.+|++. ++ ..++.+.|.++||.+.. +.++.+|+|++.++|.+||++|+++|+.
T Consensus 297 v~~v~~~-~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 297 VGTIDFV-DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred eEEEECC-CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 234542 33 78899999999998743 2346799999999999999999999964
No 122
>PRK07179 hypothetical protein; Provisional
Probab=99.80 E-value=3.7e-18 Score=199.46 Aligned_cols=309 Identities=16% Similarity=0.160 Sum_probs=203.7
Q ss_pred ccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHH
Q 001769 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1016)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~ 245 (1016)
..++|||...+|.++.+... .+.+.+. . +..+....+..+...++++.+|+++|.+. +.++++|+.++++++
T Consensus 60 ~~~~YL~l~~~p~v~~a~~~-~~~~~~~---~--~~~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~sG~~An~~~l 131 (407)
T PRK07179 60 QSNDYLNLSGHPDIIKAQIA-ALQEEGD---S--LVMSAVFLHDDSPKPQFEKKLAAFTGFES--CLLCQSGWAANVGLL 131 (407)
T ss_pred ecCCccCCCCCHHHHHHHHH-HHHHhCC---C--CCccccccCCchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHH
Confidence 45678999976665555543 4433211 1 00011111222355667789999999975 678899999888877
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHH
Q 001769 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFI 319 (1016)
Q Consensus 246 ~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v---d~~~L~~-l~~-~t~~V~v~~p-n~~G~i~dl~eI~ 319 (1016)
.++. +++++|+++...|+++...++. .|++++.. |+++|++ +++ ++++|++.++ |.+|.+.|+++|.
T Consensus 132 ~~l~---~~g~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 132 QTIA---DPNTPVYIDFFAHMSLWEGVRA----AGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHhC---CCCCEEEEECCcCHHHHHHHHH----CCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 7664 2689999999999999877643 36665554 5677776 654 4677777776 6899999999999
Q ss_pred HHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEe
Q 001769 320 KNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVG 389 (1016)
Q Consensus 320 ~lah~~GalviV~a~~~alg~l~~pg-----~~----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG 389 (1016)
++|+++|+++++| +.+++|.....+ .+ ++|++++|. |.|+. ..|++++++++++.++.. .
T Consensus 205 ~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~-------~~G~l~~~~~~~~~~~~~--~ 274 (407)
T PRK07179 205 DIAEEFGCVLVVD-ESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG-------RAGIITCPRELAEYVPFV--S 274 (407)
T ss_pred HHHHHcCCEEEEE-CcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc-------cCeEEEeCHHHHHHHHHh--C
Confidence 9999999999994 455555432211 23 469999997 87752 257899988876655210 0
Q ss_pred eeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 001769 390 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 469 (1016)
Q Consensus 390 ~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l 469 (1016)
.+ + ...+|.+ .+.+.++.+++ .++. ..+++.+++.++.++|++.|+++| +++
T Consensus 275 -------~~-~------------~~~~t~~---~~~~aa~~aal--~~~~--~~~~~~~~l~~~~~~l~~~L~~~g-~~v 326 (407)
T PRK07179 275 -------YP-A------------IFSSTLL---PHEIAGLEATL--EVIE--SADDRRARLHANARFLREGLSELG-YNI 326 (407)
T ss_pred -------cC-e------------eeCCCCC---HHHHHHHHHHH--HHHh--cCHHHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 00 0 0112222 12222333333 3331 124577889999999999999987 776
Q ss_pred cCCCCccEEEEecCC---HHHHHHHHHHcCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 470 QGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 470 ~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.+.. ..+.+..+. +..+.+.|.++||.+... ..+.+|++++..+|++|+++++++|..
T Consensus 327 ~~~~--~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 327 RSES--QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred CCCC--CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 6432 223343332 567888999999974321 146899999999999999999999964
No 123
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1e-18 Score=193.08 Aligned_cols=241 Identities=22% Similarity=0.265 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH---HHHhCC--cEEEE
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCG--MKIVS 706 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~---~a~~~G--~~vv~ 706 (1016)
++..-..+..++|||++.+++||.||++++.++++|+. +++|.|+-.+-.||-|-. .....| ++++.
T Consensus 72 ~vE~laierak~LFga~~anVQPhSGs~AN~av~~All--------~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~ 143 (413)
T COG0112 72 EVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALL--------QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVS 143 (413)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHc--------CCCCeEecccCCCCCcccCCCCCCccceeEEeEe
Confidence 34445668899999999999999999999988888775 478899987777774432 222223 67888
Q ss_pred EcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccc---cCcCCCCcc
Q 001769 707 VGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSPGYI 782 (1016)
Q Consensus 707 v~~d~-~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~---~~l~~pg~~ 782 (1016)
.++|+ ++.+|.|++++.+.++ ++++|+.....+.-.+ |++++.+||++.|+.+.+|.|+..++ +.+.+|..+
T Consensus 144 Y~vd~et~~IDyD~~~k~a~e~--kPK~ii~G~SaY~r~i--d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~ 219 (413)
T COG0112 144 YGVDPETGLIDYDEVEKLAKEV--KPKLIIAGGSAYSRPI--DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH 219 (413)
T ss_pred cccccccCccCHHHHHHHHHHh--CCCEEEECcccccccc--CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc
Confidence 88885 5999999999999865 4556777665555555 79999999999999999999985443 335678777
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
+||++.+.|||| .||..|+|.+++ ++...+-..++.+ +.++|. ...+++.|-++..
T Consensus 220 -AdvVTtTTHKTl------rGPrGG~Il~~~eel~kkin~aVFPg---------------~qggpl-~HviAakaVa~~E 276 (413)
T COG0112 220 -ADVVTTTTHKTL------RGPRGGIILTNDEELAKKINSAVFPG---------------LQGGPL-MHVIAAKAVAFKE 276 (413)
T ss_pred -cceEeCCcccCC------CCCCceEEEeccHHHHHHhhhhcCCc---------------cCCChH-HHHHHHHHHHHHH
Confidence 999999999999 578889999996 6766653322211 111222 2345555666655
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
.+ ..++++.+++.+.||+.|++.|.+ +++|+- .++..|.+++|+++
T Consensus 277 al-~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvs---GgTdnHl~lVDl~~ 323 (413)
T COG0112 277 AL-EPEFKEYAKQVVKNAKALAEALKERGFKVVS---GGTDNHLVLVDLRS 323 (413)
T ss_pred Hc-ChhHHHHHHHHHHHHHHHHHHHHHcCCeEec---CCccceEEEEEccc
Confidence 55 457999999999999999999987 899985 35788999999983
No 124
>PLN02483 serine palmitoyltransferase
Probab=99.80 E-value=1.3e-17 Score=198.72 Aligned_cols=317 Identities=17% Similarity=0.219 Sum_probs=207.1
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|....||||.+..+...++.+.+++.. |.++.. .+....|+...+.++++.+|+++|.+. +.++.+|++++.+
T Consensus 104 n~~s~~YLgl~~~~~~~~~~~~~ai~~---~g~~~~--~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~ 176 (489)
T PLN02483 104 NLGSYNYLGFAAADEYCTPRVIESLKK---YSASTC--SSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNST 176 (489)
T ss_pred EeecCCccCcCCCCHHHHHHHHHHHHH---hCCCCC--ccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHH
Confidence 445668999996443344444446554 233221 334556778889999999999999765 6777888877766
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---chhhhc-c-------CCCE-----eEEEEEcC-
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K-------SGDV-----CGVLVQYP- 306 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd---~~~L~~-l-------~~~t-----~~V~v~~p- 306 (1016)
++.++. ++||+|++++..|++++..++ ..|++++.++ ++++++ + .++| +.+++..+
T Consensus 177 ~i~al~---~~Gd~Vi~d~~~h~s~~~~~~----~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 177 IIPALI---GKGGLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred HHHHhC---CCCCEEEEcchhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 555552 389999999999999998864 3577877764 344443 2 1333 45555544
Q ss_pred -CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC----------cccceEEEecC-ccccccCCCCCcceEEEE
Q 001769 307 -GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG----------ELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1016)
Q Consensus 307 -n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg----------~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~ 374 (1016)
|+.|.+.|+++|+++|+++|+++++ ++.++++.+.+.| ..++||+++|. |.||.+ | ||++
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~liv-DEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~---G----G~i~ 321 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYL-DEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC---G----GYIA 321 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEE-ECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC---c----eEEE
Confidence 7899999999999999999999999 4566655432211 13679999998 888631 2 7999
Q ss_pred eehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCccc---HHHHHHHHH
Q 001769 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG---LKTIAQRVH 451 (1016)
Q Consensus 375 ~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~G---l~~ia~~~~ 451 (1016)
+++++++.+.... +++ ...++ +++....+..+++ -...+.+| ..+..+++.
T Consensus 322 ~~~~li~~l~~~~----------~~~------------~~~~~---~~p~~~~~~~aaL-~~l~~~~g~~~~~~~~~~l~ 375 (489)
T PLN02483 322 GSKELIQYLKRTC----------PAH------------LYATS---MSPPAVQQVISAI-KVILGEDGTNRGAQKLAQIR 375 (489)
T ss_pred cCHHHHHHHHHhC----------ccc------------cccCC---cCHHHHHHHHHHH-HHHHhCccccchHHHHHHHH
Confidence 8888877662100 000 00001 1112222222222 11122222 244567889
Q ss_pred HHHHHHHHHHhcCCCeEEcCCC--CccEEEEecCC-HHHHHHHHHHcCceeecc-------cCCeEEEEeccCCCHHHHH
Q 001769 452 GLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVD 521 (1016)
Q Consensus 452 ~~a~~L~~~L~~~G~~~l~~~~--~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~-------~~~~lris~te~~t~edid 521 (1016)
++.+++++.|+++| +++.... ..-.+.+..+. ..++.+.|.++||.+... ..+.+|++++..+|++||+
T Consensus 376 ~~~~~l~~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId 454 (489)
T PLN02483 376 ENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLI 454 (489)
T ss_pred HHHHHHHHHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 99999999999997 8766321 11122222222 568999999999987532 1367999999999999999
Q ss_pred HHHHHHhC
Q 001769 522 KLFIVFAG 529 (1016)
Q Consensus 522 ~ll~aL~~ 529 (1016)
+++++|..
T Consensus 455 ~~l~~L~~ 462 (489)
T PLN02483 455 KALEVISE 462 (489)
T ss_pred HHHHHHHH
Confidence 99999963
No 125
>PLN02271 serine hydroxymethyltransferase
Probab=99.80 E-value=5.7e-18 Score=197.96 Aligned_cols=259 Identities=17% Similarity=0.135 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHHHHHhCCCc----eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH---------
Q 001769 630 YQEMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--------- 696 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~----~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~--------- 696 (1016)
.-++..-.++..+++||++. +++++.||+.|++++++++. +++|+|+..+..||.|...
T Consensus 192 iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~ 263 (586)
T PLN02271 192 IDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKK 263 (586)
T ss_pred HHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccc
Confidence 33555566788999999886 78999999999988877763 4788999988888866543
Q ss_pred HHhCCcEEEEEc--CC-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccc
Q 001769 697 AAMCGMKIVSVG--TD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1016)
Q Consensus 697 a~~~G~~vv~v~--~d-~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~ 773 (1016)
+...|+.+..++ +| ++|.+|++++++.+.+ .++++|++...++.-.+ |+++|+++|+++|+++++|+||..++
T Consensus 264 vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Saypr~~--D~~~i~eIAdevGA~LmvD~AH~aGL 339 (586)
T PLN02271 264 VSGASIFFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYPREW--DYARFRQIADKCGAVLMCDMAHISGL 339 (586)
T ss_pred cccccceEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhccCcC--CHHHHHHHHHHcCCEEEEECcccccc
Confidence 234565555555 65 4699999999985432 78999988765554332 89999999999999999999998666
Q ss_pred cCc---CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCC-CC-CCC--cCCCC-CCccCC
Q 001769 774 VGL---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG-IP-APE--KSQPL-GTIAAA 845 (1016)
Q Consensus 774 ~~l---~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~-~~-~re--~~~~~-g~i~s~ 845 (1016)
... ..|.. ++|++++++||||. ||..|+|+++++..+.+.+...++.+. .+ ..+ ..++. ....+.
T Consensus 340 Ia~g~~~sP~~-~aDvvt~TTHKtLr------GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgG 412 (586)
T PLN02271 340 VAAKECVNPFD-YCDIVTSTTHKSLR------GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGG 412 (586)
T ss_pred cccCcCCCCCc-CCcEEEeCCcccCC------CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccC
Confidence 532 24544 59999999999994 565578888876665555444333221 00 000 01111 111122
Q ss_pred ccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecCc
Q 001769 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGL 912 (1016)
Q Consensus 846 ~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~~ 912 (1016)
+. +..+++.|.+.- .+....+++.+++.+.||+.|++.|.+ +|+|..- ++--|.+++|+++.
T Consensus 413 ph-n~~IAalAvalk-ea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~g---gTdnHlvLvDl~~~ 475 (586)
T PLN02271 413 PH-NNHIAALAIALK-QVATPEYKAYMQQVKKNAQALASALLRRKCRLVTG---GTDNHLLLWDLTTL 475 (586)
T ss_pred hh-HHHHHHHHHHHH-HHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeC---CCCcceeeecCccc
Confidence 22 222444444433 333344799999999999999999976 8999874 45669999999754
No 126
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.80 E-value=2e-17 Score=193.12 Aligned_cols=240 Identities=17% Similarity=0.189 Sum_probs=166.3
Q ss_pred hhhHHHHHHHHHHHHHHHhCC-CceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhC
Q 001769 627 AQGYQEMFNNLGEWLCTITGF-DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMC 700 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~-~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~ 700 (1016)
.+-..+.+.++++.+++++|. +...+..++| ++|. ..+++.+.... ..++++||+++..|.++. ..++..
T Consensus 62 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l---~~~~~~~~~~~-~~~gd~vl~~~~~~~s~~~~~~~~~~~~ 137 (406)
T PRK09295 62 SAQATEKMENVRKQAALFINARSAEELVFVRGTTEGI---NLVANSWGNSN-VRAGDNIIISEMEHHANIVPWQMLCARV 137 (406)
T ss_pred HHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHH---HHHHHHhhhhc-CCCcCEEEECcchhhHHHHHHHHHHHHc
Confidence 344667888999999999998 4334444444 4443 33444321111 135789999998887542 235678
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 701 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 701 G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
|++++.++.+++|.+|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++..+...+ ..
T Consensus 138 g~~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~ 212 (406)
T PRK09295 138 GAELRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTEN-PLAEMIALAHQHGAKVLVDGAQAVMHHPV-DV 212 (406)
T ss_pred CcEEEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccC-CHHHHHHHHHHcCCEEEEEcccccCcccc-Cc
Confidence 9999999998889999999999997 78999999998 5789998 89999999999999999999986443322 33
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC--------CCC----CCCcCCCCCCccCCcc
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG--------GIP----APEKSQPLGTIAAAPW 847 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g--------~~~----~re~~~~~g~i~s~~~ 847 (1016)
.++++|++++|+||.+ |++|+|++++++++.+.+|....+++. .+. .+..+.+|.++.
T Consensus 213 ~~~~~D~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~---- 282 (406)
T PRK09295 213 QALDCDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTG---- 282 (406)
T ss_pred hhcCCCEEEeehhhcc------CCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHH----
Confidence 4689999999999965 334689999999887777654333210 000 000122222222
Q ss_pred chhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 848 G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
......+.+.++...|++.+.++...+++++.++|++.
T Consensus 283 ----~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 320 (406)
T PRK09295 283 ----GIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV 320 (406)
T ss_pred ----HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 22223444444444567777888888999999999863
No 127
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=1.8e-18 Score=199.97 Aligned_cols=266 Identities=17% Similarity=0.194 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc-ccH---HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg-~~~---~~a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.. +..++|.++..+++.++ . +++++|+++.+.++ ++. ..+...|++++.++.
T Consensus 47 ~~~L~~~lA~l~g~~~~-v~~~sG~~ai~~~l~al---~-----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 47 VLELTKKIVELENAEMG-VAFSSGMGAISTTALAL---L-----KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 34788999999998764 55677765553333332 1 35789999876554 333 346678999998886
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
+ |.+.+++.++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++. .+....|.++|+|+++
T Consensus 118 ~-----~~~~l~~~~~---~~tklV~l~sp~NPtG~v~-d~~~I~~la~~~g~~vivDea~~--~~~~~~~l~~~~divv 186 (376)
T PRK06460 118 G-----SDNIIEKAKS---KRYDVVFVENITNPLLRVV-DITELSKVCKENGSILIVDATFS--TPINQKPLELGADIVV 186 (376)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcC--ccccCChhhcCCCEEE
Confidence 4 3344555555 789999999995 689887 89999999999999999997753 2323456677899999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
.|+||+|+ +| |+..+|+++.++++.+.+.. . ....+. +..+ . .+|+...|.+.|
T Consensus 187 ~S~sK~l~-G~--~~~~~G~~~~~~~l~~~l~~--~-----------~~~~g~-~~~~-------~--~a~~~l~~~~~l 240 (376)
T PRK06460 187 HSASKFLA-GH--NDVIAGLAAGYGKLLNVIDQ--M-----------RRTLGT-SLDP-------H--AAYLTLRGIKTL 240 (376)
T ss_pred eecceecc-CC--CCceEEEEecCHHHHHHHHH--H-----------HHhcCC-CCCH-------H--HHHHHHhchhhH
Confidence 99999985 22 34558888887766544311 0 001111 1111 1 345555677889
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISIREEIAQI 933 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i~~e~~~~ 933 (1016)
..+.+++.+|+.++++.|+++ -+|.|||+.+++.|++ .|++++..+++.+|+++|+.| ..+.++
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~-~~~~s~ 319 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLI-IPAQTL 319 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcc-eeccCC
Confidence 999999999999999999974 5899999999988884 345555567899999999977 345554
Q ss_pred hcCCCCCCCCccccCCCCC
Q 001769 934 ENGKADIHNNVLKGAPHPP 952 (1016)
Q Consensus 934 ~~g~~~~~~~~l~~ap~~~ 952 (1016)
| +.++|..+|.++
T Consensus 320 --G----g~~sl~~~p~~~ 332 (376)
T PRK06460 320 --G----GVNSVISHPATM 332 (376)
T ss_pred --C----CCceEEeCcccc
Confidence 5 789999999877
No 128
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.79 E-value=7.4e-18 Score=196.88 Aligned_cols=313 Identities=14% Similarity=0.139 Sum_probs=201.7
Q ss_pred CccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHH
Q 001769 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1016)
Q Consensus 165 ~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~ 244 (1016)
...++|+|+..+|.++.+.+. .+.. |.+..+ .+....|..+...++++.+|+++|.+. +.++++|+.+++++
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~-~~~~---~~~~~~--~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~SG~~An~~a 121 (406)
T PRK13393 50 WCSNDYLGMGQHPAVLAAMHE-ALDT---CGAGAG--GTRNISGTNHYHVLLEAELADLHGKEA--ALLFTSGYVSNWAA 121 (406)
T ss_pred eecccccCCCCCHHHHHHHHH-HHHH---cCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEeCCcHHHHHHH
Confidence 345689999987766666553 4432 222221 122333556677889999999999764 77888888888877
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cchhhhc-c----CCCEeEEEEEcC-CCCeeeccH
Q 001769 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-K----SGDVCGVLVQYP-GTEGEVLDY 315 (1016)
Q Consensus 245 ~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v---d~~~L~~-l----~~~t~~V~v~~p-n~~G~i~dl 315 (1016)
+.++... .+++.|++++..|++++..++. .|.+++.+ |++++++ + .+++++|++..+ |++|.+.|+
T Consensus 122 i~~l~~~-~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l 196 (406)
T PRK13393 122 LSTLGSR-LPGCVILSDELNHASMIEGIRH----SRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPI 196 (406)
T ss_pred HHHhhcC-CCCCEEEEccchhHHHHHHHHH----cCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCH
Confidence 6544211 1567888889999999999853 24455444 4555554 3 236778888877 688999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCCc---------ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCC
Q 001769 316 GDFIKNAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (1016)
Q Consensus 316 ~eI~~lah~~GalviV~a~~~alg~l~~pg~---------~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpg 385 (1016)
++|.++|+++|++++| ++.++.|++.+.|. -..||++++. |.||.+ | ||+.+++++.+.+..
T Consensus 197 ~~i~~l~~~~~~~liv-Dea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~---G----G~~~~~~~~~~~l~~ 268 (406)
T PRK13393 197 AEICDVAEKHGAMTYL-DEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM---G----GYITGSAALCDFIRS 268 (406)
T ss_pred HHHHHHHHHcCCEEEE-ECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc---C----ceeeCCHHHHHHHHH
Confidence 9999999999999999 45666665543321 1258888886 888642 2 688777776655410
Q ss_pred ceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC
Q 001769 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (1016)
Q Consensus 386 rivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G 465 (1016)
..+.|.. .++.| .....+..+++ .++...+. ..++..++.++|++.|+++|
T Consensus 269 ----------~~~~~~~------------t~~~~---p~~~aa~~aaL--~~~~~~~~--~~~~~~~~~~~l~~~L~~~g 319 (406)
T PRK13393 269 ----------FASGFIF------------TTSLP---PAVAAGALASV--RHLKASSA--ERERHQDRVARLRARLDKAG 319 (406)
T ss_pred ----------hCcCcee------------cCccC---HHHHHHHHHHH--HHHhhCHH--HHHHHHHHHHHHHHHHHHcC
Confidence 0000100 00000 01122333333 33322332 23566788999999999887
Q ss_pred CeEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 466 TVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 466 ~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~-~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++++.+. -..+.+.+++ +.++.+.|.+ +||.++.. ..+.||++++.++|++|+++++++|..
T Consensus 320 -~~~~~~~-~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 320 -IPHLPNP-SHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred -CCcCCCC-CCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 7655321 1122333332 5789999987 59988643 126799999999999999999999964
No 129
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.79 E-value=2.5e-18 Score=199.44 Aligned_cols=267 Identities=16% Similarity=0.136 Sum_probs=187.7
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
.++++.+++++|.+. .+.+++|+++..++++++. +++++|+++...|+..... +...|+++..++.
T Consensus 64 ~~Le~~lA~l~G~~~-al~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~- 133 (386)
T PRK06767 64 KLFEERMAVLEGGEE-ALAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM- 133 (386)
T ss_pred HHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-
Confidence 478899999999875 4667788765544433331 3578999998877654333 3346888877765
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++ +.+....|...|+|++++
T Consensus 134 ----~d~~~l~~~i~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~g~~vivD~a~--a~~~~~~pl~~g~Div~~ 203 (386)
T PRK06767 134 ----ETEADIENKIR---PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNGLLVIVDNTF--CSPYLQRPLELGCDAVVH 203 (386)
T ss_pred ----CCHHHHHHhhC---cCceEEEEeCCCCCCceec-CHHHHHHHHHHcCCEEEEECCC--cccccCCchhcCCcEEEe
Confidence 48999999997 789999999995 578887 8999999999999999999775 344456778899999999
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~ 869 (1016)
|++|+|+.+ |++.+|+++++++++..+-... ....|...+ ++ -+|+...|.+.+.
T Consensus 204 S~sK~l~g~---g~~~gG~v~~~~~~i~~~~~~~------------~~~~g~~~~-~~---------~a~l~~~~L~tl~ 258 (386)
T PRK06767 204 SATKYIGGH---GDVVAGVTICKTRALAEKIRPM------------RKDIGGIMA-PF---------DAWLLLRGLKTLA 258 (386)
T ss_pred cCcceecCC---CCceeEEEEeChHHHHHHHHHH------------HHHhCCCCC-HH---------HHHHHHcCCCcHH
Confidence 999999522 4444689998876543321000 011222221 11 2344556667888
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCccccCCCC------ceeeEEEEEecCchhHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 001769 870 EASKIAILNANYMAKRLEKH---YPILFRGVNG------TVAHEFIVDLRGLKEELDRYCDALISIREEIAQIENGKADI 940 (1016)
Q Consensus 870 ~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~------~~~he~i~~~~~~~~~ld~f~~~l~~i~~e~~~~~~g~~~~ 940 (1016)
.+.++..+||.+++++|+++ -.|.||+.+- .+.--+.|++++..++..+|+++|+.+ ....++ |
T Consensus 259 ~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~-~~~~s~--G---- 331 (386)
T PRK06767 259 VRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFI-TIAVSL--G---- 331 (386)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCcc-EEecCC--C----
Confidence 89999999999999999984 3467762110 001124566665566789999999876 344554 6
Q ss_pred CCCccccCCCCCC
Q 001769 941 HNNVLKGAPHPPS 953 (1016)
Q Consensus 941 ~~~~l~~ap~~~~ 953 (1016)
+.++|..+|.++.
T Consensus 332 ~~~sl~~~p~~~~ 344 (386)
T PRK06767 332 DTETLIQHPATMT 344 (386)
T ss_pred CcCccccCCCccc
Confidence 7899999998773
No 130
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.79 E-value=2.2e-18 Score=198.03 Aligned_cols=258 Identities=19% Similarity=0.196 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHH----hCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~----~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.+ +..+||.++..+++ ..+ +++|+||++...+|....... ..++++.+
T Consensus 56 ~~~le~~lA~leg~~~~-v~~~sG~aAi~~~l---~~l------~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~--- 122 (364)
T PRK07269 56 RAKLEETLAAIESADYA-LATSSGMSAIVLAF---SVF------PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY--- 122 (364)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHH---HHh------CCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe---
Confidence 34788999999997764 55777776553333 211 257899998877775544322 12333332
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
..|+++++++|+ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.+ ++.+...+|...|+|+++
T Consensus 123 ----~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~-di~~I~~la~~~gi~vvvD~t--~~~~~~~~pl~~gaDivv 192 (364)
T PRK07269 123 ----ANTEEELIAAIE---EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKGAKVIVDNT--FYSPIYQRPIELGADIVL 192 (364)
T ss_pred ----cCCHHHHHHhcC---cCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECC--CcccccCCchhhCCcEEE
Confidence 258999999998 899999999996 578776 999999999999999999966 344555688889999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++. | |+.-+|++++++ ++.+.+.. . ....|...+ ++ -+||...|.+.
T Consensus 193 ~S~tK~l~g-~--~d~~gG~v~~~~~~l~~~~~~-~------------~~~~G~~~s-~~---------~a~l~~~~L~t 246 (364)
T PRK07269 193 HSATKYLSG-H--NDVLAGVVVTNDLELYEKLFY-N------------LNTTGAVLS-PF---------DSYLLMRGLKT 246 (364)
T ss_pred ecCceeccC-C--CcccceEEEeCcHHHHHHHHH-H------------HHHhCCCCC-HH---------HHHHHHcCCCc
Confidence 999999962 2 322356777754 44333310 0 011222222 22 46788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEEEEEecCchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLKEELDRYCDALISIREEIAQIENGKADIHNNV 944 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~i~~~~~~~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~ 944 (1016)
|..+.+++.+||.+++++|+++ .+|.|||..+... |.+. ..++..+|+++|+.+ ..+.++ | +.++
T Consensus 247 L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~s----f~~~-~~~~~~~f~~~l~~~-~~~~sl--G----~~~s 314 (364)
T PRK07269 247 LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMIS----FKVA-DETRIPHILNSLKVF-TFAESL--G----GVES 314 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEE----EEEC-CHHHHHHHHHhCCcc-eEccCC--C----CcCe
Confidence 9999999999999999999974 5889998765543 3343 356789999999976 445565 5 6789
Q ss_pred cccCCCCC
Q 001769 945 LKGAPHPP 952 (1016)
Q Consensus 945 l~~ap~~~ 952 (1016)
|..+|.++
T Consensus 315 l~~~p~~~ 322 (364)
T PRK07269 315 LITYPTTQ 322 (364)
T ss_pred EeeCCccc
Confidence 99999876
No 131
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=1.1e-17 Score=194.89 Aligned_cols=286 Identities=17% Similarity=0.147 Sum_probs=192.3
Q ss_pred CCcccccCCCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcc---cccccccccC---------CCCCchhh
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP---VTWPSFANIH---------PFAPADQA 627 (1016)
Q Consensus 560 ~lp~~~~~~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~---~~~~~f~~~~---------P~~p~e~~ 627 (1016)
.+| +.|+++..+...|.+|+..|..-...-+ |.|. ..-++. +.+..|.-|| -.|| + +
T Consensus 29 ~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~--~~ge-----re~rv~~~~~~~~~~~~~hgigr~~~l~~~q~-k-a 97 (444)
T TIGR03531 29 KIP--EEGWDDETIELFLHELSVMDTNNFPNNV--GVGE-----REGRVFSKLVARRHYRFCHGIGRSGDLVAPQP-K-A 97 (444)
T ss_pred cCC--ccCCCHHHHHHHHHHHhcCCcCCCcccc--CcCc-----ccceeechhhhhcccceecCCCCcccccccCc-c-c
Confidence 567 4899999999999999998864332222 3332 111111 1121222233 3455 2 2
Q ss_pred hh---HHHHHHHHHHHHHHHhCCCc--eeeecCChH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCC
Q 001769 628 QG---YQEMFNNLGEWLCTITGFDS--FSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1016)
Q Consensus 628 qG---~~e~~~el~~~laeL~G~~~--~~l~~~sGa-~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G 701 (1016)
.| ...+..++++++++++|.+. ..+..++|+ .+...++++++. ++ .++++||+|...|.+..+++.+.|
T Consensus 98 ~gss~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~----~~-~~gd~VI~p~~th~S~~kAi~~~G 172 (444)
T TIGR03531 98 AGSSLLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRH----KR-PKAKYVIWPRIDQKSCIKAISTAG 172 (444)
T ss_pred cCccHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCC----cC-CCCCEEEEECcChHHHHHHHHHcC
Confidence 33 66788999999999999982 234455554 233223333321 11 146789999999988888899999
Q ss_pred cEEEEEcC--C-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCc--cccccHHHHHHHHHHcCcEEEEEccccccccCc
Q 001769 702 MKIVSVGT--D-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHG--VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1016)
Q Consensus 702 ~~vv~v~~--d-~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G--~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l 776 (1016)
++++.+++ + +++.+|+++|+++|++..+++.++++.+|++++ ..+ |+++|+++|+++|+++|+|+|+.......
T Consensus 173 ~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d-dL~eIa~la~k~gI~lIvDaAyg~~~~~~ 251 (444)
T TIGR03531 173 FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPD-DIEEIAKICANYDIPHIVNNAYGLQSNKY 251 (444)
T ss_pred CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchh-CHHHHHHHHHHcCCEEEEECcCcCcChhh
Confidence 99999995 3 458999999999998332256777788887654 666 99999999999999999998875321111
Q ss_pred ---C-CCCccC-CcEEEeCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchh
Q 001769 777 ---T-SPGYIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1016)
Q Consensus 777 ---~-~pg~~G-aDi~~~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a 850 (1016)
. .....| +|++++|+||+|.+|-+ +|+++++ +++.+.+.... .+....
T Consensus 252 ~~~~~~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~~y---------------~g~~~~------ 305 (444)
T TIGR03531 252 MELINKAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISKSY---------------PGRASA------ 305 (444)
T ss_pred hhhhhccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHHhc---------------cCCCCC------
Confidence 0 112344 79999999999987621 4667675 44444331100 000011
Q ss_pred hHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.....+|+.+..+|.+|++++.++..++++++.++|++
T Consensus 306 s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~ 343 (444)
T TIGR03531 306 SPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQK 343 (444)
T ss_pred hHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12456799999999999999999999999999999986
No 132
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.79 E-value=1e-17 Score=195.59 Aligned_cols=314 Identities=14% Similarity=0.151 Sum_probs=200.4
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHH
Q 001769 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1016)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA 243 (1016)
|...+||+|.+.+|..+.+... .+. +.++.. ..+....|..+.+.++++.+|+++|.+. +.++.+|+.++++
T Consensus 50 ~~~s~dylgl~~~p~v~~a~~~-~~~-~~~~~~----~~s~~~~g~~~~~~~l~~~la~~~g~~~--~~~~~sG~~an~~ 121 (407)
T PRK09064 50 VWCSNDYLGMGQHPKVIEAMIE-ALD-RCGAGA----GGTRNISGTNHYHVELERELADLHGKEA--ALVFTSGYVSNDA 121 (407)
T ss_pred EEECCCCcCCCCCHHHHHHHHH-HHH-HcCCCC----CCcCcCccCHHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHH
Confidence 3446789999976554444432 332 222111 1222334556678889999999999654 6677888877776
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE---eCchhhhc-cC----CCEeEEEEEcC-CCCeeecc
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV---SDLKDIDY-KS----GDVCGVLVQYP-GTEGEVLD 314 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~---vd~~~L~~-l~----~~t~~V~v~~p-n~~G~i~d 314 (1016)
++..+... .+++.|+.+...|.+++..++. .++++.. .|++++++ ++ +++++|++.++ |++|.+.|
T Consensus 122 ai~~l~~~-~~~~~i~~~~~~h~s~~~~~~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~ 196 (407)
T PRK09064 122 TLSTLAKL-IPDCVIFSDELNHASMIEGIRR----SRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP 196 (407)
T ss_pred HHHHHhCC-CCCCEEEEeCcchHHHHHHHHH----cCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC
Confidence 65543211 2567777788899999888754 2444443 34556665 42 46888888887 68899999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCC
Q 001769 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1016)
Q Consensus 315 l~eI~~lah~~GalviV~a~~~alg~l~~pg-----~~----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lp 384 (1016)
+++|.++|+++|++++| ++.+++|++.+.+ .. ..||++++. |.||.+ | ||+++++++++.+.
T Consensus 197 l~~i~~l~~~~~~~liv-DEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~~~~~~~~~~~l~ 268 (407)
T PRK09064 197 IAEICDLADKYNALTYL-DEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM---G----GYIAGSAALVDAVR 268 (407)
T ss_pred HHHHHHHHHHcCCEEEE-ECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc---C----ceEecCHHHHHHHH
Confidence 99999999999999999 4566655543322 11 358999887 888642 2 68888887766541
Q ss_pred CceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001769 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1016)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~ 464 (1016)
.. .+.|.+ |... +.....+..+++ .++... ....+++.++.+++.+.|+++
T Consensus 269 ~~----------~~~~~~--------------t~~~-~~~~~~aa~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 269 SY----------APGFIF--------------TTSL-PPAIAAAALASI--RHLKES--NEERERHQERAAKLKAALDAA 319 (407)
T ss_pred Hh----------Cccccc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 00 000100 0000 001112222232 344333 344678889999999999998
Q ss_pred CCeEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeccc-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~-~GI~~~~~~-------~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
| ++++.+. ...+.+.++. +.++.+.|.+ +||.++... .+.+|+|++.++|++|+++++++|..
T Consensus 320 g-~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 320 G-IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred C-CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7 8766421 1123333332 6789998875 599886531 25799999999999999999999963
No 133
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.79 E-value=8.1e-17 Score=187.92 Aligned_cols=231 Identities=15% Similarity=0.190 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHhCCCcee-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH---HhCCcEEEE
Q 001769 631 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVS 706 (1016)
Q Consensus 631 ~e~~~el~~~laeL~G~~~~~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a---~~~G~~vv~ 706 (1016)
.+.+.++++.+++++|.+... +++++|+++...++.++..+.. .++++|+++..+|.++...+ +..|++++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~ 121 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK----SKGNHIITSKTEHKAVLDTCRYLEREGFEVTY 121 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEECCCccHHHHHHHHHHHhcCCEEEE
Confidence 467889999999999998544 4445555565444444432111 25678999999898765443 456999999
Q ss_pred EcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCc
Q 001769 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1016)
Q Consensus 707 v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaD 785 (1016)
++++++|.+|+++++++++ +++++|++++++ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+|
T Consensus 122 v~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~-~~~~I~~l~~~~g~~livD~a~a~g~~~~-~~~~~~~D 196 (402)
T TIGR02006 122 LPPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERKVFFHVDAAQSVGKIPI-NVNELKVD 196 (402)
T ss_pred EccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceecc-cHHHHHHHHHHcCCEEEEEcchhcCCccc-CccccCCC
Confidence 9999889999999999997 789999999984 689998 99999999999999999999986544332 34568999
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhCh
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~ 865 (1016)
++++|+||++ |++|+|+++++++....+.....+. ... +..+.++.++. ....+..+..++.
T Consensus 197 ~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~--~~~-~~~~~gt~~~~-----~~~al~~al~~~~---- 258 (402)
T TIGR02006 197 LMSISGHKIY------GPKGIGALYVRRKPRVRLEALIHGG--GHE-RGMRSGTLPTH-----QIVGMGEAFRIAK---- 258 (402)
T ss_pred EEEEehhhhc------CCCceEEEEEccCCCCCCCceecCC--Ccc-CCccCCCccHH-----HHHHHHHHHHHHH----
Confidence 9999999965 3347899999975443332222211 110 00112222221 1122223333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc
Q 001769 866 KGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 866 eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+++..+.++...+++++.++|++
T Consensus 259 ~~~~~~~~~~~~l~~~l~~~l~~ 281 (402)
T TIGR02006 259 EEMAQDTAHVLALRDRLLNGIKS 281 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhc
Confidence 46788888999999999999976
No 134
>PRK07049 methionine gamma-lyase; Validated
Probab=99.78 E-value=7e-18 Score=197.84 Aligned_cols=270 Identities=17% Similarity=0.184 Sum_probs=195.8
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
..+++.|+++.|.+. .+..++|.++..++++++. +++++|+++.+.++.+... +...|++++.++.
T Consensus 86 ~~Le~~lA~leg~~~-~iv~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~- 155 (427)
T PRK07049 86 EIVEDRLAVYEGAES-AALFSSGMSAIATTLLAFV--------RPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD- 155 (427)
T ss_pred HHHHHHHHHHhCCCc-EEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC-
Confidence 368899999999775 4667788766544443332 3578999999888766544 3567998777652
Q ss_pred CCCCCCHHHHHHHHHcC--CCCEEEEEEEcCC-CCccccccHHHHHHHHHH------cCcEEEEEccccccccCcCCCCc
Q 001769 711 AKGNINIEELRKAAEAN--RDNLSTLMVTYPS-THGVYEEGIDEICKIIHD------NGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~--~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~------~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
+ .|++++++++.+. .++|++|++++|+ .+|.+. |+++|.++++. +|+++++|.+ +.......|.+
T Consensus 156 --~-~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~-d~~~l~~la~~~~~~~~~~~~vvvDet--y~~~~~~~pl~ 229 (427)
T PRK07049 156 --G-LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLV-DVAAVRRVADAIEARQGHRPIIACDNT--LLGPVFQKPLE 229 (427)
T ss_pred --C-CCHHHHHHHHHhhccCCCceEEEEECCCCCCCccc-CHHHHHHHHHHhhhcccCCCEEEEECC--ccccccCCccc
Confidence 2 5788888877521 2579999999995 688886 89999999998 7999999954 33344456778
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
.|+|+++.|++|+|+ |.+|..+|+++.++++.+.+-. . ....|...+ ++ .+|+.
T Consensus 230 ~g~divv~S~SK~~g---G~~glr~G~vv~~~~l~~~l~~-~------------~~~~g~~ls-~~---------~a~l~ 283 (427)
T PRK07049 230 HGADLSVYSLTKYVG---GHSDLVAGAVLGRKALIRQVRA-L------------RSAIGTQLD-PH---------SCWML 283 (427)
T ss_pred cCCCEEEEcCceeec---CCCCcEEEEEECCHHHHHHHHH-H------------HHhcCCCCC-HH---------HHHHH
Confidence 899999999999996 2256789999887766544311 0 011122111 11 34455
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhcc---CCccccCC--CCceeeEE------------EEEecCchhHHHHHHHHHH
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGV--NGTVAHEF------------IVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~~---~~v~y~g~--~~~~~he~------------i~~~~~~~~~ld~f~~~l~ 924 (1016)
..|.+.+..+.+++.+|+..+++.|+++ -+|.|||. ++++.|++ .|++++..+...+|+++|+
T Consensus 284 ~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 363 (427)
T PRK07049 284 GRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQ 363 (427)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCc
Confidence 6666789999999999999999999975 58999985 78888873 3445555567899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCccccCCCCCC
Q 001769 925 SIREEIAQIENGKADIHNNVLKGAPHPPS 953 (1016)
Q Consensus 925 ~i~~e~~~~~~g~~~~~~~~l~~ap~~~~ 953 (1016)
.| ..+.++ | +.++|..+|.++.
T Consensus 364 l~-~~~~sl--G----~~~sli~~~~~~~ 385 (427)
T PRK07049 364 IF-KLAVSL--G----GTESLASHPASMT 385 (427)
T ss_pred cc-EEcccC--C----CCCceeeCCCccc
Confidence 87 345565 6 7899999998773
No 135
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.78 E-value=8.3e-18 Score=191.41 Aligned_cols=237 Identities=19% Similarity=0.245 Sum_probs=173.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHhCCC---ceeeecCChHHHHHHHHHHHHHHHHhc------CCCCCCEEEEcCCCccccHH
Q 001769 625 DQAQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKAR------GDHHRNVCIIPVSAHGTNPA 695 (1016)
Q Consensus 625 e~~qG~~e~~~el~~~laeL~G~~---~~~l~~~sGa~ae~a~l~air~~~~~~------g~~~~~~Vlv~~saHg~~~~ 695 (1016)
+.+++..++++++.+++++++|.+ ...+++++|++|+..++.+++...... +...+.+|++++.+|.++..
T Consensus 31 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~ 110 (345)
T cd06450 31 DESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK 110 (345)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH
Confidence 346788899999999999999986 224667778777766666655321110 01124578889999999888
Q ss_pred HHHhCCcEEEEEcCCCCCCCCHHHHHHHHHc---CCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccc
Q 001769 696 TAAMCGMKIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 771 (1016)
Q Consensus 696 ~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~---~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~ 771 (1016)
.+...|.+++.++++++|.+|+++|++++++ ...++++|++++|+ .+|.++ |+++|+++|+++|+++|+|+++..
T Consensus 111 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 111 AAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID-PLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-CHHHHHHHHHHhCCeEEEechhhH
Confidence 8888899999999998899999999999972 11278888888885 689998 899999999999999999998754
Q ss_pred cccCcCCC-----CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCc
Q 001769 772 AQVGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1016)
Q Consensus 772 a~~~l~~p-----g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~ 846 (1016)
........ ...++|++++++||+++.|+ |+|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~-----g~g~~~~~---------------------------------- 230 (345)
T cd06450 190 FLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL-----GCSAVLVR---------------------------------- 230 (345)
T ss_pred HHhhChhhHHHhcCccccCEEEEchhHhhCCCc-----chHHHHHH----------------------------------
Confidence 33221111 11379999999999986443 34444322
Q ss_pred cchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc--CCccccCCCCceeeEEEEEecC
Q 001769 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 847 ~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~--~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
++..|+.+..+|.+|++++.++..++++|+.++|++. +++..+ + ..+-+.+.+.+
T Consensus 231 ------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~--~~~iv~f~~~~ 287 (345)
T cd06450 231 ------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE--P--NLSLVCFRLKP 287 (345)
T ss_pred ------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--C--ceeEEEEEECC
Confidence 2334778888999999999999999999999999874 444322 1 23345555544
No 136
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.78 E-value=2.2e-17 Score=193.17 Aligned_cols=313 Identities=14% Similarity=0.140 Sum_probs=197.8
Q ss_pred ccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHH
Q 001769 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1016)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~ 245 (1016)
..++|+|.+.+|..+.+.+. .+. +. .+..+ .+....|..+...++++.+|+++|.+. +.++.+|+.++++++
T Consensus 52 ~sn~yl~l~~~p~v~~a~~~-~~~-~~--~~~~~--~s~~~~~~~~~~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i 123 (410)
T PRK13392 52 CSNDYLGMGQHPDVIGAMVD-ALD-RY--GAGAG--GTRNISGTSHPHVLLERELADLHGKES--ALLFTSGYVSNDAAL 123 (410)
T ss_pred ECCCccCCCCCHHHHHHHHH-HHH-Hc--CCCCc--hhhhcccChHHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHH
Confidence 34678999876655555543 332 22 12111 222334555567789999999999754 677788887777666
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---chhhhc-c----CCCEeEEEEEcC-CCCeeeccHH
Q 001769 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K----SGDVCGVLVQYP-GTEGEVLDYG 316 (1016)
Q Consensus 246 ~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd---~~~L~~-l----~~~t~~V~v~~p-n~~G~i~dl~ 316 (1016)
.++... .+++.|+++...|+++...++. .|.++..++ .+++++ + ++++++|++.+| |++|.+.|++
T Consensus 124 ~~l~~~-~~g~~vi~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 124 STLGKL-LPGCVILSDALNHASMIEGIRR----SGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred HHHhcC-CCCCEEEEehhhhHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 543211 2578899988999998876642 466665543 334443 2 357889999988 6899999999
Q ss_pred HHHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCc
Q 001769 317 DFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1016)
Q Consensus 317 eI~~lah~~GalviV~a~~~alg~l~~pg---------~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgr 386 (1016)
+|.++|+++|++++| ++.+++|.+.+.+ .-.+|+++++. |.||.+ | ||+++++++++.+...
T Consensus 199 ~i~~l~~~~~~~liv-Dea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~---G----G~~~~~~~~~~~l~~~ 270 (410)
T PRK13392 199 AICDLADRYNALTYV-DEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL---G----GYIAASADLIDFVRSF 270 (410)
T ss_pred HHHHHHHHcCCEEEE-ECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc---c----chhhcCHHHHHHHHHh
Confidence 999999999999999 4566655543221 11468888887 888643 2 6887777766543100
Q ss_pred eEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001769 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1016)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~ 466 (1016)
.+.|.. ++... .....+..+++ ..+... .+..+++.++.+++++.|+++|
T Consensus 271 ----------~~~~~~--------------s~~~~-~~~~~a~~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g- 320 (410)
T PRK13392 271 ----------APGFIF--------------TTALP-PAVAAGATAAI--RHLKTS--QTERDAHQDRVAALKAKLNANG- 320 (410)
T ss_pred ----------Ccchhc--------------cCcCC-HHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-
Confidence 000000 00000 01122222333 222222 2345777888999999999987
Q ss_pred eEEcCC-CCccEEEEecCC-HHHHHHHHH-HcCceeeccc-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 467 VEVQGL-PFFDTVKVKCAD-AHAIASAAY-KIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 467 ~~l~~~-~~~~~v~i~~~~-~~~v~~~L~-~~GI~~~~~~-------~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+++..+ ..+-.+.+..+. +.++.++|. ++||.++... ...+|++++..+|++|+++++++|..
T Consensus 321 ~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 321 IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 776532 112122232222 568999886 6799986531 25799999999999999999999963
No 137
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.78 E-value=1.1e-16 Score=186.42 Aligned_cols=239 Identities=16% Similarity=0.175 Sum_probs=163.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCC-ceeee-cCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCC
Q 001769 628 QGYQEMFNNLGEWLCTITGFD-SFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCG 701 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~-~~~l~-~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G 701 (1016)
+-..+.+.++++.+++++|.+ ...+. .+++++|. .++++.+... ...++++||+++..|.++. ..++..|
T Consensus 56 ~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l---~~~~~~~~~~-~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g 131 (398)
T TIGR03392 56 QSLTARYELARQQVARFLNAPDAENIVWTRGTTESI---NLVAQSYARP-RLQPGDEIIVSEAEHHANLIPWLMVAQQTG 131 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHH---HHHHHHhhhc-cCCCCCEEEECCcchhHHHHHHHHHHHHcC
Confidence 335567889999999999985 33444 44444444 3334433110 1135789999999887642 3457889
Q ss_pred cEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCC
Q 001769 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1016)
Q Consensus 702 ~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg 780 (1016)
++++.+++++++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....
T Consensus 132 ~~v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~-~~~~ 206 (398)
T TIGR03392 132 AKVVKLPIGADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCP-DLARAITLAHQYGAVVVVDGAQGVVHGP-PDVQ 206 (398)
T ss_pred cEEEEEecCCCCCcCHHHHHHHhc---cCceEEEEECccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCCC-CChh
Confidence 999999998888899999999997 789999999985 789997 8999999999999999999988533322 1234
Q ss_pred ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC-------CCCCCC----cCCCCCCccCCccch
Q 001769 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-------GIPAPE----KSQPLGTIAAAPWGS 849 (1016)
Q Consensus 781 ~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g-------~~~~re----~~~~~g~i~s~~~G~ 849 (1016)
++++|++++|+||.+ |.+|+|++++++++.+.++....+... .+...+ .+.+|.++. .
T Consensus 207 ~~~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~-----~ 275 (398)
T TIGR03392 207 ALDIDFYAFSGHKLY------GPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIA-----G 275 (398)
T ss_pred hcCCCEEEEeccccc------CCCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHH-----H
Confidence 578999999999966 334689999998877766543222110 000000 111222221 2
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
...+..|..++. ..|+.++.++...+++++.+.|++.
T Consensus 276 ~~a~~~al~~l~---~~g~~~i~~~~~~l~~~l~~~l~~l 312 (398)
T TIGR03392 276 VIGLSAALEWLT---DIDIAAAEAWSVSLADLAEERLAQL 312 (398)
T ss_pred HHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 233344444554 4466677888889999999999863
No 138
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.77 E-value=2e-17 Score=189.87 Aligned_cols=317 Identities=13% Similarity=0.078 Sum_probs=204.4
Q ss_pred CCCChHHHHHHHHhCCCcccccCCChhHHh---hhHHHHHHHHHHHHHHHcCCC-CccEEEccc-hHHHHHHHHHHhccc
Q 001769 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIA---QGRLESLLNFQTMIADLTGLP-MSNASLLDE-GTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 177 ~~~~p~~i~~~i~~~~~~~t~ytPyq~e~s---qG~le~i~e~q~~iA~L~G~~-~anasl~~~-~Taa~eA~~~a~~~~ 251 (1016)
|..+|+.|.+++...-..+...+....+++ ....+.+.+.++.+++|+|++ ..++.++.| +|.++++++.++...
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~ 86 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD 86 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC
Confidence 567888887666542111111111111233 344578889999999999984 456777777 999999988877321
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch------h---hh-c-cCCCEeEEEEEc-CCCCeeeccHHHHH
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------D---ID-Y-KSGDVCGVLVQY-PGTEGEVLDYGDFI 319 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~------~---L~-~-l~~~t~~V~v~~-pn~~G~i~dl~eI~ 319 (1016)
.+++++|++....|.+ ..+++..|+++++++.+ + ++ . +++++++|.+++ .|.+|.+. .
T Consensus 87 ~~~~~~i~~g~~~~~~-----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~--~--- 156 (355)
T cd00611 87 KGTADYVVTGAWSAKA-----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEF--D--- 156 (355)
T ss_pred CCeEEEEECCHHHHHH-----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEc--c---
Confidence 1245666664444333 22355668877776532 2 12 2 567899998876 68899973 2
Q ss_pred HHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCc
Q 001769 320 KNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKP 398 (1016)
Q Consensus 320 ~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~ 398 (1016)
++++.+|++++||+ ..++|..+ +..++|+ ++.++||+. |.||+|++++++++++++++....
T Consensus 157 ~i~~~~g~~~~VDa-~qs~g~~~idv~~~~~--~~ss~~K~l-----GP~G~g~l~~~~~~~~~~~~~~~~--------- 219 (355)
T cd00611 157 EVPDTGGVPLVADM-SSNILSRPIDVSKFGV--IYAGAQKNL-----GPAGVTVVIVRKDLLGKARKITPS--------- 219 (355)
T ss_pred eecccCCCeEEEEc-cccccCCCCCHHHhCE--EEeeccccc-----CCCceEEEEECHHHHhhcccCCCC---------
Confidence 34456999999943 23455432 3456664 445566652 335689999999998877653211
Q ss_pred ceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcC-CCeE-EcCC--C
Q 001769 399 ALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GTVE-VQGL--P 473 (1016)
Q Consensus 399 ~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~-G~~~-l~~~--~ 473 (1016)
+ +...+.... ....+|+|+ .+++++.+++ .|+..+ |++++.+|..+++++|+++|+++ | +. ...+ .
T Consensus 220 -~-~~~~~~~~~-~~~~~Tpn~---~~i~~L~aal--~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~~~~~ 290 (355)
T cd00611 220 -M-LNYKTHADN-NSLYNTPPT---FAIYMMGLVL--KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPVDKRA 290 (355)
T ss_pred -c-ccHHHHHhc-CCCCCCChH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCCCHHH
Confidence 0 000000010 012578887 6778888887 677777 79999999999999999999999 6 53 2111 1
Q ss_pred Ccc-EEEEecCC---HHHHHHHHHHcCceeecc--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 474 FFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 474 ~~~-~v~i~~~~---~~~v~~~L~~~GI~~~~~--~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
... .++|+.++ ..++.+.+.++|+..... ..+.+|+|+..+||++||++|+++|..
T Consensus 291 rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 291 RSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred cCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 222 36777665 345556777899975433 247899999999999999999999863
No 139
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.77 E-value=1.1e-16 Score=186.11 Aligned_cols=245 Identities=18% Similarity=0.176 Sum_probs=170.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCC
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCG 701 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G 701 (1016)
.++..+.+.++++.+++++|.+...+..++| +++. .++++.+... .+++++||+++..|.++. ..++..|
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l---~~~~~~~~~~--~~~gd~vl~~~~~~~s~~~~~~~~~~~~g 129 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLT---FLLSRAISRR--WGPGDEVIVTRLDHEANISPWLQAAERAG 129 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHH---HHHHHHHHhc--CCCCCEEEEcCCchHhHHHHHHHHHHhcC
Confidence 5677788999999999999987544444444 3333 2333332111 135789999998887653 2356789
Q ss_pred cEEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 702 MKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 702 ~~vv~v~~d~-~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
++++.+++++ ++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+.. ....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~-~~~~ 204 (397)
T TIGR01976 130 AKVKWARVDEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIV-DLAAITELVHAAGALVVVDAVHYAPHG-LIDV 204 (397)
T ss_pred CEEEEEeccccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccC-CHHHHHHHHHHcCCEEEEehhhhcccc-CCCH
Confidence 9999999886 68999999999997 789999999985 689997 899999999999999999999854322 2234
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccC-CCCCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~-g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
.++++|++++++||+|+ |++|++++++++.+.+........ +....+ .+.++. +++....+..|..
T Consensus 205 ~~~~~d~~~~s~~K~~g-------~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~gt~-----~~~~~~~l~~al~ 271 (397)
T TIGR01976 205 QATGADFLTCSAYKFFG-------PHMGILWGRPELLMNLPPYKLTFSYDTGPER-FELGTP-----QYELLAGVVAAVD 271 (397)
T ss_pred HHcCCCEEEEechhhcC-------CceEEEEEcHHHHhhCCCccccCccCCCcch-hcCCCC-----CHHHHHHHHHHHH
Confidence 56899999999999972 458999999877655543221110 000000 111222 2333444556677
Q ss_pred HHHHhCh-----------hhHHHHHHHHHHHHHHHHHHHhc--cCCccc
Q 001769 859 YIAMMGS-----------KGLTEASKIAILNANYMAKRLEK--HYPILF 894 (1016)
Q Consensus 859 ~l~~lG~-----------eGl~~~~~~~~~nA~yla~~L~~--~~~v~y 894 (1016)
++...|. ++++++.++..++++++.++|++ ++++..
T Consensus 272 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 320 (397)
T TIGR01976 272 YLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYG 320 (397)
T ss_pred HHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 7777763 24677788889999999999987 355543
No 140
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.77 E-value=4.8e-17 Score=187.64 Aligned_cols=262 Identities=18% Similarity=0.226 Sum_probs=181.0
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCc-eee-ecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhC
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDS-FSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMC 700 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~-~~l-~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~ 700 (1016)
+.-..+++.++++.+++++|++. ..+ +..+++.|...+ ++.+.... +++++|++....|.++... ++..
T Consensus 38 ~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~---~~~l~~~~--~~g~~vl~~~~~~~s~~~~~~~~~~~~ 112 (371)
T PF00266_consen 38 SREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAV---ASSLLNPL--KPGDEVLVTSNEHPSNRYPWEEIAKRK 112 (371)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHH---HHHHHHHG--TTTCEEEEEESSHHHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhh---hhcccccc--ccccccccccccccccccccccccccc
Confidence 44567889999999999999998 554 344554444333 33332111 3567999999888876622 3478
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 701 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 701 G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
|++|++++.+.++.+|+++++++|+ ++|++|++++- +.+|++. |+++|+++||++|+++++|+++.++...+ ..
T Consensus 113 g~~v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~-pi~~I~~~~~~~~~~~~vD~~~~~g~~~i-d~ 187 (371)
T PF00266_consen 113 GAEVRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRN-PIEEIAKLAHEYGALLVVDAAQSAGCVPI-DL 187 (371)
T ss_dssp TEEEEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBS-SHHHHHHHHHHTTSEEEEE-TTTTTTSS---T
T ss_pred hhhhccccccccchhhhhhhhhhhc---cccceEEeecccccccEEe-eeceehhhhhccCCceeEechhccccccc-cc
Confidence 9999999999899999999999998 89999999985 5789998 99999999999999999999997665543 56
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC-C---CC-------CCCcCCCCCCccCCccc
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-G---IP-------APEKSQPLGTIAAAPWG 848 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g-~---~~-------~re~~~~~g~i~s~~~G 848 (1016)
.++|+|++++|+|| |+ |++|+|++++++++...+.....++.. . .+ .+..+.+|.++
T Consensus 188 ~~~~~D~~~~s~~K-l~-----gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~------ 255 (371)
T PF00266_consen 188 DELGADFLVFSSHK-LG-----GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNV------ 255 (371)
T ss_dssp TTTTESEEEEESTS-TT-----SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--H------
T ss_pred cccccceeeecccc-cC-----CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceee------
Confidence 78899999999999 75 557899999998766555222222210 0 00 00001112221
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhccCCccccCC--CCceeeEEEEEecCc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--NGTVAHEFIVDLRGL 912 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~~~v~y~g~--~~~~~he~i~~~~~~ 912 (1016)
..+......+.++...|++++.++...+++|+.+.|++...+..-|+ ....-.-+.+.+++.
T Consensus 256 --~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 319 (371)
T PF00266_consen 256 --PAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS 319 (371)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS
T ss_pred --ehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC
Confidence 22223345666666778999999999999999999998543333221 112223355666543
No 141
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.77 E-value=6.5e-18 Score=184.50 Aligned_cols=312 Identities=15% Similarity=0.168 Sum_probs=220.1
Q ss_pred cccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHH
Q 001769 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1016)
Q Consensus 167 ~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~ 246 (1016)
.++|||++-+|.+..++-+ .|-.. +-...-| +-..|+-+-..+++..+|+|-+-|. +.+|.+-..|+.+.+.
T Consensus 178 SNDYLgms~Hp~V~~A~~~-tl~~h-G~GAGGT----RNIsG~s~~hv~LE~eLA~LHqK~a--ALlFsSCfVANDstLf 249 (570)
T KOG1360|consen 178 SNDYLGMSRHPEVLDAMHD-TLDRH-GAGAGGT----RNISGHSKHHVRLEAELADLHQKEA--ALLFSSCFVANDSTLF 249 (570)
T ss_pred cCccccccCChHHHHHHHH-HHHHc-CCCcCCc----cccCCCCchhhhHHHHHHHHhcCcc--eeeeeeeeeccchHHH
Confidence 4789999988876666653 44433 3233334 3456777788899999999999987 6777777767776554
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-c---CCC-EeEEEEEc-CCCCeeeccHHHHHH
Q 001769 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SGD-VCGVLVQY-PGTEGEVLDYGDFIK 320 (1016)
Q Consensus 247 a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l---~~~-t~~V~v~~-pn~~G~i~dl~eI~~ 320 (1016)
.+... =++-+|+.+..+|.|.+..++. +.--.+.+++.|+++|++ + ++. .+.|.+.. -++.|.|.||+||++
T Consensus 250 tLak~-lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcD 327 (570)
T KOG1360|consen 250 TLAKK-LPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCD 327 (570)
T ss_pred HHHHH-CCCcEEeccccchHHHHHHhhh-cCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHH
Confidence 43211 1788999999999999999986 344567788899998876 3 333 45565654 489999999999999
Q ss_pred HHHhCCcEEEEEeccccccCCCCCCc-----c----cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEee
Q 001769 321 NAHANGVKVVMATDLLALTILKPPGE-----L----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1016)
Q Consensus 321 lah~~GalviV~a~~~alg~l~~pg~-----~----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~ 390 (1016)
+||++|++..+ ++.++.|+..+-|. - -+||+.|+. |.||. .| ||++.+..+++.+.
T Consensus 328 vah~yGAiTFl-DEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VG----GYIAat~~LvDmiR------ 393 (570)
T KOG1360|consen 328 VAHKYGAITFL-DEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VG----GYIAATRKLVDMIR------ 393 (570)
T ss_pred HHHHhCceeee-ehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc---cc----ceehhhhhHHHHHH------
Confidence 99999999999 46778887765432 1 279999997 99974 34 69998888776541
Q ss_pred eecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH-H--HHhCcccHHHHHHHHHHHHHHHHHHHhcCCCe
Q 001769 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY-A--VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 391 s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y-~--~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~ 467 (1016)
.-|-.+|+|++..+-++++.. . .+-..+| +.+++...++..|+++.|.++| +
T Consensus 394 -----------------------SyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~G-i 448 (570)
T KOG1360|consen 394 -----------------------SYAAGFIFTTSLPPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMELG-I 448 (570)
T ss_pred -----------------------HhcCceEEecCCChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHcC-C
Confidence 112234444443333333321 1 1223455 3455666788999999999998 8
Q ss_pred EEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 468 EVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 468 ~l~~~~~~~~v~i~~~~---~~~v~~~L~~-~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++..| .+.+-+.+.+ +.++.+.|.. +||++..+ ....+||.+|+.||.+-++.|++++.
T Consensus 449 PVi~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 449 PVIPNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred cccCCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 777533 2234444443 6788888875 69988543 24789999999999999999998885
No 142
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.77 E-value=1.5e-16 Score=185.41 Aligned_cols=248 Identities=17% Similarity=0.177 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHhCCC-ceeeec-CChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcE
Q 001769 630 YQEMFNNLGEWLCTITGFD-SFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~-~~~l~~-~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~ 703 (1016)
..+.+.++++.+++++|.+ ...+.. +++++|. .++++.+... ..+++++||+++..|.++. ..+...|.+
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l---~~~~~~~~~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESI---NLVAYSWGDS-NLKAGDEIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH---HHHHHHhhhh-cCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence 4456789999999999998 334444 4444443 3333332111 1135789999999887643 235578999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
++.++++++|.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....++
T Consensus 136 ~~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~g~~~-~~~~~~ 210 (403)
T TIGR01979 136 LKFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVN-PVEEIAKLAHQVGAKVLVDGAQAVPHMP-VDVQAL 210 (403)
T ss_pred EEEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccC-CHHHHHHHHHHcCCEEEEEchhhcCccc-cCcccc
Confidence 9999999889999999999997 789999999974 689998 8999999999999999999988543322 233567
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC-CCCCCCc--CCCCC-Cc-cCCccchhhHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GIPAPEK--SQPLG-TI-AAAPWGSALILPISY 857 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g-~~~~re~--~~~~g-~i-~s~~~G~a~~~~~a~ 857 (1016)
++|++++|+||+|+ ++|+|++++++++.+.++....++.. ....... ..... .. .+++ +...++..+
T Consensus 211 ~~d~~~~s~~K~~g------p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~al~ 282 (403)
T TIGR01979 211 DCDFYVFSGHKMYG------PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTP--NIAGVIGLG 282 (403)
T ss_pred CCCEEEEecccccC------CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCc--cHHHHHHHH
Confidence 89999999999763 34689999998877666533222110 0000000 00000 00 0000 112233335
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccc
Q 001769 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILF 894 (1016)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y 894 (1016)
+.+..+...|+..+.++...+++++.++|++ ++++..
T Consensus 283 ~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~ 321 (403)
T TIGR01979 283 AAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYG 321 (403)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 5555555557778889999999999999986 455543
No 143
>PRK05968 hypothetical protein; Provisional
Probab=99.77 E-value=1.1e-17 Score=194.19 Aligned_cols=264 Identities=15% Similarity=0.132 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~vv~v~~ 709 (1016)
..++++.+++++|.+.+ +.+++|++|...+++++. +++++||++...|+... ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDA-RGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 45788999999999865 445777765544443321 35789999887776432 235578999999976
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|++++++++ ++|++|++++|+ ..+.+. |+++|+++||++|+++++|+++ +.+....|..+|+|+++
T Consensus 136 -----~d~~~l~~~i----~~tklV~ie~pt~~~~~~~-dl~~i~~la~~~gi~vivD~a~--a~~~~~~p~~~g~Divv 203 (389)
T PRK05968 136 -----RDEEAVAKAL----PGAKLLYLESPTSWVFELQ-DVAALAALAKRHGVVTMIDNSW--ASPVFQRPITLGVDLVI 203 (389)
T ss_pred -----CCHHHHHHhc----ccCCEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCC--cchhccCchhcCCcEEE
Confidence 3899999887 368899999986 456665 9999999999999999999765 33434567789999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
+|+||+|+.| |++++|+++.++++...+.... ....|...+ ++ -+++...|.+.|
T Consensus 204 ~S~tK~l~g~---~~~~gG~i~~~~~~~~~l~~~~------------~~~~g~~~~-~~---------~A~~~l~~L~tl 258 (389)
T PRK05968 204 HSASKYLGGH---SDTVAGVVAGSKEHIARINAEA------------YPYLGAKLS-PF---------EAWLLLRGLRTL 258 (389)
T ss_pred eeccccccCC---CCeEEEEEEECHHHHHHHHHHH------------HHhCCCCCC-hH---------HHHHHHcccCcH
Confidence 9999999632 4566788888876554331100 001121111 11 344557778889
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceee-------EEEEEecCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAH-------EFIVDLRGLKEELDRYCDALISIREEIAQIENGKA 938 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~h-------e~i~~~~~~~~~ld~f~~~l~~i~~e~~~~~~g~~ 938 (1016)
..+.+++.++|.+++++|+++ -.|.|||+.+++.+ -+.|++++ ..+.++|+++|+.+ ..+.++ |
T Consensus 259 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~-~~~~s~--G-- 332 (389)
T PRK05968 259 PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLF-RLGVSW--G-- 332 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCcc-EEecCC--C--
Confidence 999999999999999999974 47778987654322 24455553 34678999999864 334444 6
Q ss_pred CCCCCccccCCCCC
Q 001769 939 DIHNNVLKGAPHPP 952 (1016)
Q Consensus 939 ~~~~~~l~~ap~~~ 952 (1016)
+.++|.. |.++
T Consensus 333 --~~~slv~-p~~~ 343 (389)
T PRK05968 333 --GHESLVV-PAEV 343 (389)
T ss_pred --CCCceee-eCcc
Confidence 7788888 8765
No 144
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.77 E-value=1.6e-16 Score=182.99 Aligned_cols=263 Identities=17% Similarity=0.178 Sum_probs=176.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC-ceee-ecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhC
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD-SFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMC 700 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~-~~~l-~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~ 700 (1016)
++...+.+.++++.+++++|.+ ...+ ..+++++|. .++++++... ..++++|++++..|+++. ..++..
T Consensus 38 ~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~---~~~~~~l~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~ 112 (373)
T cd06453 38 SARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAI---NLVAYGLGRA--NKPGDEIVTSVMEHHSNIVPWQQLAERT 112 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHH---HHHHHHhhhc--CCCCCEEEECcchhHHHHHHHHHHHhhc
Confidence 3456677888999999999988 4344 444554443 3444443221 015678999998887642 234578
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 701 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 701 G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
|++++.|+.+.+|.+|+++++++++ +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+... ...
T Consensus 113 g~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~-~~~ 187 (373)
T cd06453 113 GAKLKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAGVPVLVDGAQSAGHMP-VDV 187 (373)
T ss_pred CcEEEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcC-CHHHHHHHHHHcCCEEEEEhhhhcCcee-eec
Confidence 9999999999889999999999997 689999999985 689998 8999999999999999999887533221 123
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC--CC--C--CC-CcCCCCCCccCCccchhhH
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG--GI--P--AP-EKSQPLGTIAAAPWGSALI 852 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g--~~--~--~r-e~~~~~g~i~s~~~G~a~~ 852 (1016)
.++|+|++++|+||+|+ ++|+|++++++++.+.+.....++.. .. . .+ ....... ..+ + +...
T Consensus 188 ~~~~~d~~~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~t-~--~~~~ 257 (373)
T cd06453 188 QDLGCDFLAFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFE-AGT-P--NIAG 257 (373)
T ss_pred cccCCCEEEeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccC-CCC-C--CHHH
Confidence 46799999999999984 36789999998776665432222110 00 0 00 0000000 011 1 1122
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc--CCccccCCCCceeeEEEEEecC
Q 001769 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~--~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
+...++.+..+..+|++++.++...+++|+.+.|++. +++..+. ....+-+.+.++.
T Consensus 258 ~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~ 316 (373)
T cd06453 258 AIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA--EDRAGVVSFNLEG 316 (373)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc--cccCCeEEEEECC
Confidence 3344666777777889899999999999999999873 4554321 1122345566543
No 145
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.76 E-value=1.2e-16 Score=182.72 Aligned_cols=281 Identities=12% Similarity=0.060 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHcCCCC-ccEEEccc-hHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 211 ESLLNFQTMIADLTGLPM-SNASLLDE-GTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~-anasl~~~-~Taa~eA~~~a~~~~~~~gd~Vlvs~-~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
+.+.+.++.+.+++|.+. ..+.++.| ||.++|+++..+.. +++++++-. ..+.. -+...++.+|+ +..+.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~---~~~~~l~i~~G~fg~---r~~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLA---EGKVADYIVTGAWSK---KAAKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC---CCCeEEEEECCHHHH---HHHHHHHHhCC-cEEEe
Confidence 788888999999999743 35667766 99999999887632 466655433 33322 22344566676 44433
Q ss_pred ---------chhhhc--cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001769 288 ---------LKDIDY--KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1016)
Q Consensus 288 ---------~~~L~~--l~~~t~~V~v~~-pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvg 354 (1016)
..+++. ++++++.|.+++ .|.+|...| ++++.+|++++|++ ..++|... +..+| |++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDa-vss~g~~~id~~~~--d~~~~ 181 (349)
T TIGR01364 110 SGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADM-SSNILSRPIDVSKF--GLIYA 181 (349)
T ss_pred ccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEc-cccccCccCCHHHc--cEEEE
Confidence 123333 456788898876 588999876 66777899999943 23444332 23444 59999
Q ss_pred cCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH
Q 001769 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 355 s~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
++||+ +|.||+|++++++++++++++.... + +.+....+. ..-.+|+|+ ..++++.+++
T Consensus 182 ssqK~-----lgP~Glg~l~~s~~~~~~~~~~~~~----------~-~~~~~~~~~-~~~~~Tp~~---~~i~al~~al- 240 (349)
T TIGR01364 182 GAQKN-----IGPAGLTVVIVRKDLLGRASRITPS----------M-LNYKIHAEN-DSMYNTPPT---FAIYVSGLVF- 240 (349)
T ss_pred ecccc-----cCCCceEEEEECHHHHhhcccCCCC----------c-chHHHHHhc-CCCCCCCcH---HHHHHHHHHH-
Confidence 99554 2335689999999999887552110 1 111000000 011268887 6777777776
Q ss_pred HHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CC--Ccc-EEEEecCC---HHHHHHHHHHcCceeecc--cC
Q 001769 435 AVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DS 504 (1016)
Q Consensus 435 ~~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~-~~--~~~-~v~i~~~~---~~~v~~~L~~~GI~~~~~--~~ 504 (1016)
.++..+ |++++.+|..+++++++++|++++|+.... ++ ... .++|..++ ..++.+.+.++||.+... ..
T Consensus 241 -~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 319 (349)
T TIGR01364 241 -KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSV 319 (349)
T ss_pred -HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcccc
Confidence 677778 799999999999999999999995465542 21 222 36677664 366767888899965443 24
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001769 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 505 ~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.+|+|+..+||.+||++|+++|+
T Consensus 320 g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 320 GGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred CeeEEECcCCCCHHHHHHHHHHHH
Confidence 789999999999999999999986
No 146
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=7.6e-17 Score=181.79 Aligned_cols=288 Identities=19% Similarity=0.177 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc-c-CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-K-GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~-~-~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
.++.+.++.||+|.|+++.++++++++|.++..++....+. + +..++||+.+.+||++...|+.+. ..|++++.++.
T Consensus 85 ~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~-~~g~~Vt~lpv 163 (428)
T KOG1549|consen 85 DAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQ-EEGLEVTYLPV 163 (428)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHH-hcCeEEEEecc
Confidence 45889999999999999999999999997777666555443 1 122389999999999999998864 56899999876
Q ss_pred h--------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001769 289 K--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1016)
Q Consensus 289 ~--------~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k 357 (1016)
+ +++. |+++|++|.+... |..|++.|++||+++|++.|+.|++++ +++.|.++ +..++|+|+++.+++
T Consensus 164 ~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~Da-AQavG~i~vDV~eln~D~~s~s~H 242 (428)
T KOG1549|consen 164 EDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDA-AQAVGKIPVDVQELNADFLSISAH 242 (428)
T ss_pred CccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeeh-hhhcCCccccHHHcCchheeeecc
Confidence 3 3555 8899999999875 688999999999999999999999943 44666553 568999999999996
Q ss_pred cccccCCCCCcceEEEEeeh--hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~~--~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~ 435 (1016)
+|. |-|+.|+||||+ ..++..| .+.| |. |-| -.+.||-+...+.+ +.+++-.
T Consensus 243 K~y-----gp~~iGaLYvr~~~~~~~~~p-~~~G------Gg-------q~r----~~rsGT~~~~~~~~---~gsA~e~ 296 (428)
T KOG1549|consen 243 KIY-----GPPGIGALYVRRKRPRLRVEP-PLSG------GG-------QER----GLRSGTVATPLAVG---LGSAAEF 296 (428)
T ss_pred ccc-----CCCcceEEEEccCCCcccccC-cccC------Cc-------ccc----ccccCCcCchhhhh---hHHHHHH
Confidence 653 446689999996 2333333 3444 11 111 13457777644333 3334322
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCeEEcCC-C--CccEEEEecC---C---HHHHHHHHHHcCce-----ee
Q 001769 436 VYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL-P--FFDTVKVKCA---D---AHAIASAAYKIEMN-----LR 500 (1016)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~L~~~L~~-~G~~~l~~~-~--~~~~v~i~~~---~---~~~v~~~L~~~GI~-----~~ 500 (1016)
.-....+.+.+.++ +...+..++.. ...+.+.+. + .-..+.|.++ + ..+.......-|.- +.
T Consensus 297 ~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~e 373 (428)
T KOG1549|consen 297 VNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLE 373 (428)
T ss_pred HHhhcchhHHHHHH---HHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCC
Confidence 22222334444433 45555555533 211223221 1 1123444443 1 11111111111110 00
Q ss_pred c------------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 501 V------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 501 ~------------~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+ .....+|||+.-+++.+|++.+++.+..
T Consensus 374 psy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~ 414 (428)
T KOG1549|consen 374 PSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKK 414 (428)
T ss_pred cchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHH
Confidence 0 0146799999999999999999999864
No 147
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.76 E-value=4.8e-16 Score=179.73 Aligned_cols=231 Identities=16% Similarity=0.199 Sum_probs=158.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCcee-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH---HHhCCcE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMK 703 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~~~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~---a~~~G~~ 703 (1016)
+-..+.+.++++++++++|.+... ++.++|++|...++.++..+ . .++++|+++..+|.++... +...|++
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~---~--~~~~~vv~~~~~~~s~~~~~~~~~~~G~~ 112 (379)
T TIGR03402 38 GEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA---Q--PEKRHIITTAVEHPAVLSLCQHLEKQGYK 112 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh---c--CCCCeEEEcccccHHHHHHHHHHHHcCCE
Confidence 445677889999999999988543 44455655554444433211 1 1357899988888776543 3347999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
++.++.+++|.+|+++++++++ ++|++|+++++ |.+|.+. |+++|+++||++|+++++|+++..+... ....++
T Consensus 113 v~~v~~~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~~~~~g~~~-~~~~~~ 187 (379)
T TIGR03402 113 VTYLPVDEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIF-PIEEIGEIAKERGALFHTDAVQAVGKIP-IDLKEM 187 (379)
T ss_pred EEEEccCCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecc-cHHHHHHHHHHcCCEEEEECcccccccc-cCcccC
Confidence 9999998889999999999997 78999999987 5789998 8999999999999999999998654332 234568
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~ 862 (1016)
++|++++|+||.+ |.+|+|+++++++.. ..|. ..+. .+....+.++.++.+ ...+..+..++
T Consensus 188 ~~D~~~~s~~K~~------gp~G~g~l~v~~~~~-~~p~-~~g~---~~~~~~~~gt~~~~~-----~~~l~~al~~~-- 249 (379)
T TIGR03402 188 NIDMLSLSGHKLH------GPKGVGALYIRKGTR-FRPL-LRGG---HQERGRRAGTENVPG-----IVGLGKAAELA-- 249 (379)
T ss_pred CCCEEEEcHHHcC------CCCceEEEEECCCCC-CCCc-ccCC---ccCCCcCCCCccHHH-----HHHHHHHHHHH--
Confidence 9999999999943 445799999987642 2221 2111 110001122222221 11222233333
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 863 MGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 863 lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.+++..+.++...+.+++.++|++
T Consensus 250 --~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 250 --TEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred --HHhHHHHHHHHHHHHHHHHHHHHh
Confidence 345677778888899999999874
No 148
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.76 E-value=8.2e-17 Score=183.27 Aligned_cols=264 Identities=16% Similarity=0.135 Sum_probs=186.4
Q ss_pred HhhhHHHHHHHHHHHHHHHcCCC--CccEEEccchHHHHHHHHHHhccc-----------cCCCCEEEEcCCCCHHHHHH
Q 001769 205 IAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----------KGKKKTFIIASNCHPQTIDI 271 (1016)
Q Consensus 205 ~sqG~le~i~e~q~~iA~L~G~~--~anasl~~~~Taa~eA~~~a~~~~-----------~~~gd~Vlvs~~~Hps~~~~ 271 (1016)
.+.+..+...++.+++++++|.+ ..++.++.|||.++..++.+.+.. .+.+..|++++..|+++...
T Consensus 32 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~ 111 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA 111 (345)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHH
Confidence 34566667777889999999986 346888999998877666554321 01234789999999998887
Q ss_pred HHHhhcCCCeEEEEeCc--------hhhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecc
Q 001769 272 CITRADGFDIKVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDL 335 (1016)
Q Consensus 272 l~~~a~~~gi~v~~vd~--------~~L~~-l~~------~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~ 335 (1016)
++. .|++++.++. ++|++ +.+ ++++|++++| |.+|.+.|+++|+++||++|+++++++ .
T Consensus 112 ~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~-a 186 (345)
T cd06450 112 AAY----LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA-A 186 (345)
T ss_pred HHH----HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec-h
Confidence 654 2666666543 44555 544 6788888887 579999999999999999999999942 3
Q ss_pred ccccCCC-CC------CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccc
Q 001769 336 LALTILK-PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1016)
Q Consensus 336 ~alg~l~-~p------g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1016)
++.+.+. .. +..++|++++++ |+++.|++ +|+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g-----~g~~~~~------------------------------- 230 (345)
T cd06450 187 YGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLG-----CSAVLVR------------------------------- 230 (345)
T ss_pred hhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcc-----hHHHHHH-------------------------------
Confidence 3433321 11 113799999888 65655543 3444322
Q ss_pred cccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC----
Q 001769 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA---- 483 (1016)
Q Consensus 408 eqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~---- 483 (1016)
..+..++ +.+++.+|++++.++..++++++.+.|+++++++++.++..+.+.|..+
T Consensus 231 ------------------~~~~~~~--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~ 290 (345)
T cd06450 231 ------------------ALKLWAT--LRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVK 290 (345)
T ss_pred ------------------HHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcch
Confidence 1122222 3677889999999999999999999999985588775444445555543
Q ss_pred -C--HHHHHHHHHHcCce-eecc---cCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 001769 484 -D--AHAIASAAYKIEMN-LRVV---DSNTVTASFDET-TTLEDVDKLFIVFAG 529 (1016)
Q Consensus 484 -~--~~~v~~~L~~~GI~-~~~~---~~~~lris~te~-~t~edid~ll~aL~~ 529 (1016)
+ ..++.++|.++|+. +... .++.+|++++.. +|++|+++|+++|..
T Consensus 291 ~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 2 56899999998654 4322 246899999986 599999999999863
No 149
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.75 E-value=1.8e-16 Score=180.55 Aligned_cols=276 Identities=18% Similarity=0.200 Sum_probs=187.1
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001769 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1016)
Q Consensus 206 sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1016)
..|......++++.+++++|++. ..++.+||+++.+++.++. ++||+|++++..|+++...++. .|++++.
T Consensus 41 ~~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~---~~gd~Vl~~~~~~~~~~~~~~~----~g~~~~~ 111 (349)
T cd06454 41 ISGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLA---GKGDLIISDSLNHASIIDGIRL----SGAKKRI 111 (349)
T ss_pred ecCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhc---CCCCEEEEehhhhHHHHHHHHH----cCCceEE
Confidence 34555666788899999999874 5677788888777665553 3789999999999998877643 4777766
Q ss_pred e---Cchhhhc-cC-----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC---------CCCc
Q 001769 286 S---DLKDIDY-KS-----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---------PPGE 346 (1016)
Q Consensus 286 v---d~~~L~~-l~-----~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~---------~pg~ 346 (1016)
+ +.+++++ +. +.+++|++.++ |.+|.+.|+++|+++||++|+++++| +..+.|.+. ....
T Consensus 112 ~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD-~a~~~g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 112 FKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVD-EAHSVGVYGPHGRGVEEFGGLT 190 (349)
T ss_pred ecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEE-ccccccccCCCCCChhhhcccc
Confidence 5 3455655 43 35677777776 67999999999999999999999994 344444332 1235
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhH
Q 001769 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1016)
Q Consensus 347 ~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~ 425 (1016)
.++|++++|+ |.|+. |+ |+++.++++.+.+.... ..+. ..++.| ...
T Consensus 191 ~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~----------~~~~------------~~~~~~---~~~ 238 (349)
T cd06454 191 DDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYA----------RGFI------------FSTSLP---PAV 238 (349)
T ss_pred ccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhc----------hhhh------------ccCCCC---HHH
Confidence 6899999998 77753 22 67877877765541100 0000 001111 122
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC--C-HHHHHHHHHHcCceeecc
Q 001769 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVV 502 (1016)
Q Consensus 426 l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~--~-~~~v~~~L~~~GI~~~~~ 502 (1016)
..++.+++ .++.. .+++.++..++.+++.+.|+++| +++...+....+.+..+ . +.++.+.|.++||.+...
T Consensus 239 ~~a~~~~l--~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~ 313 (349)
T cd06454 239 AAAALAAL--EVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAI 313 (349)
T ss_pred HHHHHHHH--HHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEe
Confidence 22333333 33222 46678899999999999999987 77654321112222223 2 788999999999987542
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 -------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 -------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
..+.+|++++.+++++|+++++++|.
T Consensus 314 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 346 (349)
T cd06454 314 RYPTVPRGTARLRISLSAAHTKEDIDRLLEALK 346 (349)
T ss_pred cCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 13689999999999999999999986
No 150
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.75 E-value=1.1e-15 Score=177.12 Aligned_cols=229 Identities=15% Similarity=0.121 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHhCC-CceeeecCChHHHHHHHHHHHHHHHHhcC-CCCCCEEEEcCCCccccHHH---HHhCCcEEEEE
Q 001769 633 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARG-DHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 707 (1016)
Q Consensus 633 ~~~el~~~laeL~G~-~~~~l~~~sGa~ae~a~l~air~~~~~~g-~~~~~~Vlv~~saHg~~~~~---a~~~G~~vv~v 707 (1016)
.+.+..+.+.+.+|. +...+..++|++ ++..++++.+....- ..++++|+++...|+++... ++..|++++.+
T Consensus 43 ~l~~a~~~~~~~~~~~~~~~i~~t~g~t--eal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v 120 (382)
T TIGR03403 43 AIAEALDKLYKGINARDLDDIIITSCAT--ESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL 120 (382)
T ss_pred HHHHHHHHHHHHcCcCCCCeEEEeCCHH--HHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE
Confidence 344444555556665 333444444432 233444444321000 11346899999989877654 34689999999
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcE
Q 001769 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1016)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi 786 (1016)
+++++|.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....++|+|+
T Consensus 121 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~~ivD~a~~~g~~~-~~~~~~~~D~ 195 (382)
T TIGR03403 121 PINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIF-PIKEIGEICKERGVLFHTDAVQAIGKIP-VDVQKAGVDF 195 (382)
T ss_pred ecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCcccc-CHHHHHHHHHHcCCEEEEechhhcCCCc-cCccccCCCE
Confidence 999889999999999997 789999999874 789998 8999999999999999999987644322 2455789999
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+++|+||++ |.||+|++++++.+. .-| ...+. .... ....++.++. ........++.+ .+
T Consensus 196 ~~~s~~K~~------gp~G~g~l~vr~~~~-~~p-~~~g~--~~~~-~~~~gt~~~~--------~~~al~~al~~~-~~ 255 (382)
T TIGR03403 196 LSFSAHKFH------GPKGVGGLYIRKGVE-LTP-LFHGG--EHMG-GRRSGTLNVP--------YIVAMGEAMRLA-NE 255 (382)
T ss_pred EEEcchhhC------CCCceEEEEECCCCC-CCC-cccCC--CCCC-CcccCCcChH--------HHHHHHHHHHHH-HH
Confidence 999999976 456789999987642 112 12111 0000 0111222211 111112233322 34
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001769 867 GLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~ 888 (1016)
++....++....++++.++|++
T Consensus 256 ~~~~~~~~~~~l~~~l~~~L~~ 277 (382)
T TIGR03403 256 YLDFEKSHVRRLRDRLEDALLE 277 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc
Confidence 5677778888899999999976
No 151
>PLN02822 serine palmitoyltransferase
Probab=99.75 E-value=1.7e-16 Score=188.86 Aligned_cols=279 Identities=12% Similarity=0.106 Sum_probs=187.1
Q ss_pred hHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001769 203 AEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1016)
Q Consensus 203 ~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~ 282 (1016)
|+..-|+.+.+.++++.+|+++|.+. ..++.+|.+++.+++.++. +++|.|+++...|.++...++. .+.+
T Consensus 146 ~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~a~~sai~a~~---~~gd~Ii~d~~~H~s~~~~~~l----s~~~ 216 (481)
T PLN02822 146 PRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLSTIFSVIPAFC---KKGDIIVADEGVHWGIQNGLYL----SRST 216 (481)
T ss_pred cCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHhC---CCCCEEEEeCCccHHHHHHHHH----cCCe
Confidence 34456778889999999999999764 5666666666777666653 3789999999999999877643 2456
Q ss_pred EEEeC---chhhhc-c---C------CCE-eEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC--
Q 001769 283 VVVSD---LKDIDY-K---S------GDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-- 345 (1016)
Q Consensus 283 v~~vd---~~~L~~-l---~------~~t-~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg-- 345 (1016)
+++++ .++++. + . +++ ++|++..+ +++|.+.|+++|.++|+++|+++++ ++.++++++...|
T Consensus 217 ~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIv-DEa~s~gvlG~~G~G 295 (481)
T PLN02822 217 IVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLL-DESNSFGVLGKSGRG 295 (481)
T ss_pred EEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEE-ECCccccccCCCCCC
Confidence 66654 344433 2 1 234 56666554 6799999999999999999999999 5778887775433
Q ss_pred ---cc-----cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccccccccccc
Q 001769 346 ---EL-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1016)
Q Consensus 346 ---~~-----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRReka 416 (1016)
.+ ..||++++. |.||.+ | ||+++++++++.+.. .+
T Consensus 296 ~~e~~~v~~~~~dii~~s~sKalg~~---G----G~i~g~~~ii~~~~~-----------------------------~~ 339 (481)
T PLN02822 296 LSEHFGVPIEKIDIITAAMGHALATE---G----GFCTGSARVVDHQRL-----------------------------SS 339 (481)
T ss_pred hHHHcCCCCCCCeEEEecchhhhhhC---C----eEEEcCHHHHHHHHh-----------------------------cC
Confidence 13 358999986 988631 2 788888887765410 01
Q ss_pred CCccch-hhHHHHHHHHHH-HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--CccEEEEecC------C--
Q 001769 417 TSNICT-AQALLANMAAMY-AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCA------D-- 484 (1016)
Q Consensus 417 TsnicT-~~~l~a~~Aa~y-~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~--~~~~v~i~~~------~-- 484 (1016)
.+++++ +.+.+...|++. +..+ .+ ..++.++++++.+++++.|+++.|+++.... ++-.+.+... +
T Consensus 340 ~~~~fsa~lPp~~~~Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~ 417 (481)
T PLN02822 340 SGYVFSASLPPYLASAAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLS 417 (481)
T ss_pred CceeeccccCHHHHHHHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHH
Confidence 111122 112222222221 2222 12 2567889999999999999987227765322 2222333211 1
Q ss_pred -HHHHHHHHH-HcCceeecc---------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 485 -AHAIASAAY-KIEMNLRVV---------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 485 -~~~v~~~L~-~~GI~~~~~---------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..++++.|. ++||.+... .+..+|++++..+|++||++++++|..
T Consensus 418 ~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 418 LLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred HHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367899987 789987532 134699999999999999999999964
No 152
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=2.6e-17 Score=189.64 Aligned_cols=241 Identities=18% Similarity=0.154 Sum_probs=168.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEEEEEcCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~vv~v~~d 710 (1016)
.++++.++++. ....+.+++|+.+..+++.++ . +++++||+++..|+..... +...|++++.++.+
T Consensus 54 ~~Le~~lA~l~--~~~~v~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~ 123 (366)
T PRK07582 54 RALEAALGELE--GAEALVFPSGMAAITAVLRAL---L-----RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTA 123 (366)
T ss_pred HHHHHHHHHHc--CCCEEEECCHHHHHHHHHHHh---c-----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCC
Confidence 46788899888 333466777876554333332 1 3578999987766543332 34579999999875
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEEe
Q 001769 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~~ 789 (1016)
+++ + .+. ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++. .+....|.++|+|++++
T Consensus 124 ~~~-------~-~~~---~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g~~lvVD~t~~--~~~~~~p~~~g~Divv~ 189 (366)
T PRK07582 124 GMA-------E-AAL---AGADLVLAETPSNPGLDVC-DLAALAAAAHAAGALLVVDNTTA--TPLGQRPLELGADLVVA 189 (366)
T ss_pred ChH-------H-Hhc---cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCCC--CccccCchhcCCcEEEe
Confidence 321 1 233 689999999996 566665 89999999999999999998753 22234677899999999
Q ss_pred CccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
|+||+++.| +|-.+|+++++ +++.+.+... ...+|...+ ++ -+|+...|.+.+
T Consensus 190 S~sK~l~G~---~g~~~G~v~~~~~~l~~~l~~~-------------~~~~g~~~~-~~---------~a~l~~r~l~tl 243 (366)
T PRK07582 190 SDTKALTGH---SDLLLGYVAGRDPELMAAVERW-------------RLLAGAIPG-PF---------EAWLAHRSLGTL 243 (366)
T ss_pred cccccccCC---CCeeEEEEEcCcHHHHHHHHHH-------------HHHhCCCCC-HH---------HHHHHHhccccH
Confidence 999998522 33447888875 4444433110 011122221 22 355777788889
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEE------------EEEecCchhHHHHHHHHHHHH
Q 001769 869 TEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEF------------IVDLRGLKEELDRYCDALISI 926 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~------------i~~~~~~~~~ld~f~~~l~~i 926 (1016)
..+.+++.+||..++++|+++ -+|.|||+++++.|+. .|+++ ..+++.+|+++++.+
T Consensus 244 ~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~~~~l~~~ 315 (366)
T PRK07582 244 GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAERFVAASRLV 315 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHHHHHhCCcc
Confidence 999999999999999999985 5789999988887763 44554 456889999999866
No 153
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.75 E-value=1.4e-16 Score=183.02 Aligned_cols=318 Identities=13% Similarity=0.070 Sum_probs=202.7
Q ss_pred cCCCCCCCCChHHHHHHHHhCC-Cc-ccccCCCh-hHHhhhHHHHHHHHHHHHHHHcCCCC-ccEEEc-cchHHHHHHHH
Q 001769 171 IGMGYYNTHVPPVILRNIMENP-AW-YTQYTPYQ-AEIAQGRLESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAMA 245 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~-~~-~t~ytPyq-~e~sqG~le~i~e~q~~iA~L~G~~~-anasl~-~~~Taa~eA~~ 245 (1016)
...| |..+|..|.+++.... .| -+..+.+. ..-+..-.+.+.+.++.+++++|.+. ..+.++ .+||+++||++
T Consensus 7 ~~pG--P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~ 84 (360)
T PRK05355 7 FSAG--PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVP 84 (360)
T ss_pred ccCC--CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHH
Confidence 3566 6778888876665421 11 01111110 00122224678888899999999743 234444 78899999998
Q ss_pred HHhccccCCCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEe--Cc-------hhhhc--cCCCEeEEEEEc-CCCCeee
Q 001769 246 MCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVS--DL-------KDIDY--KSGDVCGVLVQY-PGTEGEV 312 (1016)
Q Consensus 246 ~a~~~~~~~gd~Vl-vs~~~Hps~~~~l~~~a~~~gi~v~~v--d~-------~~L~~--l~~~t~~V~v~~-pn~~G~i 312 (1016)
+.+-. ++++++ +....+..-. ...++.+|.. ..+ +. .++++ ++++++.|.+++ .|.+|.+
T Consensus 85 ~nl~~---~g~~~l~i~~G~fg~r~---~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 85 MNLLG---GGKKADYVDTGSWSKKA---IKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTE 157 (360)
T ss_pred HhcCC---CCCeEEEEECCHHHHHH---HHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEe
Confidence 87632 445544 3333332222 2234455654 222 21 12322 667888888775 6899999
Q ss_pred c-cHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEee
Q 001769 313 L-DYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1016)
Q Consensus 313 ~-dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~ 390 (1016)
. ||++| +|++++||+ ..++|..+ +..+| |++++++||+ +|.||+|++++++++++++.+.+ +
T Consensus 158 ~~~i~~i------~g~l~vVDa-vss~g~~~idv~~~--d~~~~ssqK~-----lgP~Glg~l~~s~~~l~~~~~~~-~- 221 (360)
T PRK05355 158 FHELPDT------GDVPLVADM-SSDILSRPIDVSKF--GLIYAGAQKN-----IGPAGLTIVIVREDLLGRALPSI-P- 221 (360)
T ss_pred cCccccc------CCCcEEEEc-CccccCccCCHHHc--cEEEEecccc-----ccCCceEEEEECHHHHhhcccCC-C-
Confidence 8 78877 799999943 23444332 33455 5999999554 23356899999999998876531 1
Q ss_pred eecCCCCcceeeecccccccccc-cccCCccchhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 391 SIDSSGKPALRVAMQTREQHIRR-DKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 391 s~d~~g~~~~~l~lqtreqhiRR-ekaTsnicT~~~l~a~~Aa~y~~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..+.+.... .+. -.+|+|+ ..++++.+++ .++..+ |++++.+|..+++++++++|+++|.+.
T Consensus 222 ---------~~~~~~~~~--~~~~~~~Tp~~---~~i~aL~~aL--~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~ 285 (360)
T PRK05355 222 ---------SMLDYKTHA--DNDSMYNTPPT---FAIYLAGLVF--KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYR 285 (360)
T ss_pred ---------hHHHHHHHH--hcCCccCCCcH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 111111000 011 1378887 7777887776 666678 899999999999999999999997223
Q ss_pred EcCC--CCcc-EEEEecCC---HHHHHHHHHHcCceeecc--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 469 VQGL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 469 l~~~--~~~~-~v~i~~~~---~~~v~~~L~~~GI~~~~~--~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.+.+ ...+ .++|..++ ..++.+.+.++||.+... ..+.+|+|+..+||.+||++|+++|+.
T Consensus 286 ~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 286 NPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred cCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 3222 2232 36777766 356767888899987433 257899999999999999999999963
No 154
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.75 E-value=2.9e-16 Score=183.95 Aligned_cols=283 Identities=13% Similarity=0.104 Sum_probs=179.4
Q ss_pred HHhhhHHHHHHHHHH----HHHHHcCCCCccEEE-ccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHH-HHHHHH-hh
Q 001769 204 EIAQGRLESLLNFQT----MIADLTGLPMSNASL-LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT-IDICIT-RA 276 (1016)
Q Consensus 204 e~sqG~le~i~e~q~----~iA~L~G~~~anasl-~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~-~~~l~~-~a 276 (1016)
+...| .+.+.++++ .+++++|.+. +.+ +.+||+|+.+++.++ . ++||+|++++..|.+. ...++- ..
T Consensus 64 r~~~G-~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al-~--~~GD~Vl~~~~~~~~~~~~g~~~~~~ 137 (416)
T PRK13034 64 RYYGG-CEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLAL-L--KPGDTILGMSLSHGGHLTHGAKVSLS 137 (416)
T ss_pred cccCC-ChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHh-c--CCCCEEEEcCccceeeeecCCcceec
Confidence 34455 366777777 9999999986 533 579999999988887 3 3899999999999873 222211 00
Q ss_pred ------cCCCeEE--EEeCchhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC--
Q 001769 277 ------DGFDIKV--VVSDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-- 344 (1016)
Q Consensus 277 ------~~~gi~v--~~vd~~~L~~-l~-~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~p-- 344 (1016)
..++++. ..+|++++++ +. .++++|++..+ .+|...|+++|.++||++|++++|| +.+++|+....
T Consensus 138 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~-~~g~~~dl~~l~~la~~~g~~livD-~Aha~G~~~~g~~ 215 (416)
T PRK13034 138 GKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS-AYPRELDFARFREIADEVGALLMVD-MAHIAGLVAAGEH 215 (416)
T ss_pred cceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC-ccccccCHHHHHHHHHHcCCEEEEe-CcccccCcccCCC
Confidence 0111111 1156677776 53 35777776554 4688889999999999999999994 45566654321
Q ss_pred -Cc-ccceEEEecC-ccccccCCCCCcceEEEEeehh-hhhcCCCceEeeeecCCCCcceeeecccccccccccccCCcc
Q 001769 345 -GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1016)
Q Consensus 345 -g~-~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~-l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsni 420 (1016)
+. -++|++++++ |+|++| .+|+++++++ +..++... +. . .++ ++++.
T Consensus 216 ~~~~~~~Di~~~s~~K~l~g~------~GG~v~~~~~~~~~~~~~~-~~-----------~-~~~----------~~~~~ 266 (416)
T PRK13034 216 PNPFPHAHVVTTTTHKTLRGP------RGGMILTNDEEIAKKINSA-VF-----------P-GLQ----------GGPLM 266 (416)
T ss_pred CCCCCCceEEEEeCcccCCCC------CCeEEEECcHHHHHHHHhh-cC-----------C-ccc----------CCccH
Confidence 11 2589999998 777443 3467766553 32222100 00 0 000 00110
Q ss_pred chhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCcc--EEEEecCC--HHHHHHHHHHc
Q 001769 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFD--TVKVKCAD--AHAIASAAYKI 495 (1016)
Q Consensus 421 cT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~--~v~i~~~~--~~~v~~~L~~~ 495 (1016)
....+...++ ...+ ..+..+..+++++++++|++.|+++| +++... ...+ .+.+..++ ...+.++|.++
T Consensus 267 ---~~~aa~~~al-~~~~-~~~~~~~~~~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~ 340 (416)
T PRK13034 267 ---HVIAAKAVAF-GEAL-QPEFKTYAKQVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERA 340 (416)
T ss_pred ---HHHHHHHHHH-HHHh-ChhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhC
Confidence 1111111111 1222 23445678999999999999999997 888642 2222 34444444 56777899999
Q ss_pred Cceeecc----------cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001769 496 EMNLRVV----------DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 496 GI~~~~~----------~~~~lris~te----~~t~edid~ll~aL~~ 529 (1016)
||.+... .+..||+++++ .++++|+++++++|..
T Consensus 341 GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 341 GITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred CcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 9988641 24679999999 6679999999999963
No 155
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.75 E-value=5.3e-16 Score=177.69 Aligned_cols=237 Identities=13% Similarity=0.152 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHHhCCCceeeecCCh-HHHHHHHHHHHHHHHHhcCCCC-CCEEEEcCCCccccHHH---HHhCCcEE
Q 001769 630 YQEMFNNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHH-RNVCIIPVSAHGTNPAT---AAMCGMKI 704 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~-~~~Vlv~~saHg~~~~~---a~~~G~~v 704 (1016)
..+.+.++++++++++|++...+..++| +++...++.++... +..+ ++.|+++...|+++... ++..|+++
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~----~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v 115 (353)
T TIGR03235 40 AKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARA----GEQKGKKHIITSAIEHPAVLEPIRALERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHh----cccCCCCeeeEcccccHHHHHHHHHHHhcCCEE
Confidence 4467889999999999998544444444 44554444443321 1112 37899999889877554 34579999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccC
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~G 783 (1016)
+.+++++++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...+++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~~ivD~a~~~g~~~~-~~~~~~ 190 (353)
T TIGR03235 116 TYLPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQ-PIREIAEVLEAHEAFFHVDAAQVVGKITV-DLSADR 190 (353)
T ss_pred EEEccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceecc-CHHHHHHHHHHcCCEEEEEchhhcCCccc-cccccC
Confidence 999998889999999999997 789999999984 789998 89999999999999999999986554332 344678
Q ss_pred CcEEEeCccccccCCCCCCCCeEEEEEEccccccc--CCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 784 aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~--lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
+|++++++||++ |.+|+|+++++++.... +.....+. + ...+ .+.++.++. ....+. +.+.
T Consensus 191 ~D~~~~s~~K~~------gp~g~g~l~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~gt~~~~-----~~~al~---~al~ 253 (353)
T TIGR03235 191 IDLISCSGHKIY------GPKGIGALVIRKRGKPKAPLKPIMFGG-G-QERG-LRPGTLPVH-----LIVGMG---EAAE 253 (353)
T ss_pred CCEEEeehhhcC------CCCceEEEEEccCcccccccCceeeCC-C-CcCc-cccCCCChH-----HHHHHH---HHHH
Confidence 999999999986 33578999999875322 22111211 0 0000 112222222 112222 2233
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
.+ .+|++++.++...+++++.++|++ ++++.
T Consensus 254 ~~-~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~ 285 (353)
T TIGR03235 254 IA-RRNAQAWEVKLRAMRNQLRDALQTLGVKLN 285 (353)
T ss_pred HH-HhhHHHHHHHHHHHHHHHHHHhccCCeEEe
Confidence 32 257888899999999999999986 45554
No 156
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.75 E-value=2e-17 Score=189.16 Aligned_cols=242 Identities=21% Similarity=0.255 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHHHhCCC----ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcccc---HHHH-------
Q 001769 632 EMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN---PATA------- 697 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~----~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~---~~~a------- 697 (1016)
++..-.++.++++||++ .+++++.||+.+++++++++. +++|+|+..+..||-| ....
T Consensus 66 ~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl--------~pGD~Im~l~l~~GGHlshg~~~~~~~~~~ 137 (399)
T PF00464_consen 66 EIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL--------KPGDTIMGLSLPHGGHLSHGSSVNFKKISA 137 (399)
T ss_dssp HHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------TT-EEEEEEGGGT--GGGT-TTSHSBSSH
T ss_pred HHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH--------hhcCcEEecChhhccccccccccccccccc
Confidence 44455678899999999 889999999998888777764 3678998876666643 3322
Q ss_pred HhCCcEEEEEcCC-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEcccccccc--
Q 001769 698 AMCGMKIVSVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-- 774 (1016)
Q Consensus 698 ~~~G~~vv~v~~d-~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~-- 774 (1016)
....++++..++| +++.+|.+++++.+.++ ++++|++...++.-.+ |++++.+||++.|+++++|++|..++.
T Consensus 138 ~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~--kPklIi~G~S~y~~~~--d~~~~reIad~vga~l~~D~sH~~GLIa~ 213 (399)
T PF00464_consen 138 SGLYFESVPYPVDPDTGLIDYDELEKLAKEH--KPKLIICGASSYPRPI--DFKRFREIADEVGAYLMADISHIAGLIAG 213 (399)
T ss_dssp HHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEEE-SSTSS-----HHHHHHHHHHTT-EEEEE-TTTHHHHHT
T ss_pred ccceEEEEeeeeecCCCeECHHHHHHHHhhc--CCCEEEECchhccCcc--CHHHHHHHHHhcCcEEEecccccccceeh
Confidence 2345788889998 56999999999999864 4556777665544443 799999999999999999999965443
Q ss_pred -CcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcc--------------cccccCCCCccccCCCCCCCCcCCCC
Q 001769 775 -GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--------------HLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1016)
Q Consensus 775 -~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~--------------~l~~~lpg~~~g~~g~~~~re~~~~~ 839 (1016)
.+.+|.+. +||+++++||+| .||..|+|.+++ ++.+.+-..+ .
T Consensus 214 g~~~~P~~~-ADvvt~sThKtl------~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~av---------------f 271 (399)
T PF00464_consen 214 GLFPNPFPY-ADVVTGSTHKTL------RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAV---------------F 271 (399)
T ss_dssp TSS--GCCT-SSEEEEESSGGG-------SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHH---------------T
T ss_pred heecCcccc-ceEEEeeccccc------cccCceEEEEcCCccccCCcccccHHHHHHHhcccc---------------C
Confidence 34678876 999999999999 478889999993 2222211000 0
Q ss_pred CCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecCc
Q 001769 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGL 912 (1016)
Q Consensus 840 g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~~ 912 (1016)
....+++. ..-+++.|.+...++-. .+++.+++.++||+.|++.|.+ +++|.+. ++..|.++++++..
T Consensus 272 P~~qg~~h-~~~iaalAval~ea~~~-~fk~Ya~qVv~NAk~La~~L~~~G~~v~~g---gTd~H~vlvd~~~~ 340 (399)
T PF00464_consen 272 PGLQGGPH-MHRIAALAVALKEALSP-EFKEYAKQVVKNAKALAEALQERGFKVVTG---GTDNHQVLVDLRSF 340 (399)
T ss_dssp TTT-SS---HHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHTT-EEGGG---S-SSSEEEEEGGGG
T ss_pred CCcccCcc-hhHHHHHHHHHhcccCH-HHHHHHHHHHHHHHHHHHHHhhCCcEEEEC---CCCCCeEEEEeccc
Confidence 11111122 22344555555555544 4689999999999999999987 8999974 46778899998753
No 157
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.74 E-value=6e-16 Score=181.86 Aligned_cols=236 Identities=15% Similarity=0.150 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHhCCCc-eeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcE
Q 001769 630 YQEMFNNLGEWLCTITGFDS-FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~-~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~ 703 (1016)
..+.+.++++.+++++|.+. ..+..++| +++ ..++++.+... ...++++||+++..|+++. ..++..|++
T Consensus 74 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a---l~~i~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~ 149 (424)
T PLN02855 74 ATDAYELARKKVAAFINASTSREIVFTRNATEA---INLVAYTWGLA-NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAV 149 (424)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHH---HHHHHHHhhhh-cCCCcCEEEECCCccHHHHHHHHHHHHHcCCE
Confidence 34567889999999999953 34444444 433 33344432100 0135679999999887543 235678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
++.++++.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 150 v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~a~~~g~~~~-~~~~~ 224 (424)
T PLN02855 150 LKFVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSIL-PVEDIVHWAHAVGAKVLVDACQSVPHMPV-DVQTL 224 (424)
T ss_pred EEEEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCcCC-Cchhc
Confidence 9999998888899999999997 789999999985 689998 89999999999999999999986444332 34568
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCC---C------C--CCCcCCCCCCccCCccchhh
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG---I------P--APEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~---~------~--~re~~~~~g~i~s~~~G~a~ 851 (1016)
++|+++.|+||.+ |++|+|++++++++.+.++....++... + . .+..+.+|.++.
T Consensus 225 ~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~-------- 290 (424)
T PLN02855 225 GADFLVASSHKMC------GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIG-------- 290 (424)
T ss_pred CCCEEEeeccccc------CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHH--------
Confidence 8999999999954 3457899999988877776543332210 0 0 000111222221
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.++...+.+..+...|+.++.++...+++++.++|++
T Consensus 291 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 327 (424)
T PLN02855 291 EAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS 327 (424)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 1222234445444557888889999999999999976
No 158
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.74 E-value=1.5e-16 Score=182.04 Aligned_cols=244 Identities=14% Similarity=0.145 Sum_probs=168.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCc--eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcccc--HHHHHhCCcEE
Q 001769 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKI 704 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~--~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~--~~~a~~~G~~v 704 (1016)
+..+...++++.+++++|.+. ..+.+++|+++.. ++++.+. .++++|+++...|..+ ...+.+.|.++
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~---~~~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~g~~~ 100 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAME---AALSNLL-----EPGDKVLVGVNGVFGDRWADMAERYGADV 100 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHH---HHHHHhC-----CCCCEEEEecCCchhHHHHHHHHHhCCCe
Confidence 455778899999999999953 2355666665543 3333331 2567899987766553 34567899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCC-CEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~-~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
+.++.++++.+|+++++++++ + ++++|++++| |.+|.+. |+++|+++||++|+++++|+++.++... ..+..+
T Consensus 101 ~~v~~~~~~~~~~~~l~~~i~---~~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~~~li~D~~~~~g~~~-~~~~~~ 175 (356)
T cd06451 101 DVVEKPWGEAVSPEEIAEALE---QHDIKAVTLTHNETSTGVLN-PLEGIGALAKKHDALLIVDAVSSLGGEP-FRMDEW 175 (356)
T ss_pred EEeecCCCCCCCHHHHHHHHh---ccCCCEEEEeccCCCccccc-CHHHHHHHHHhcCCEEEEeeehhccCcc-cccccc
Confidence 999998888999999999998 5 8899999988 4689987 8999999999999999999987543222 345677
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCC--CccccCCCCCCC-C-cCCCCCCccCCccchhhHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGIPAP-E-KSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg--~~~g~~g~~~~r-e-~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
|+|+++.++||+|+.| +|+|++++++++.+.+.. ...++....... + .........+. +...+....+
T Consensus 176 ~~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~---~~~~~~a~~a 247 (356)
T cd06451 176 GVDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTP---PVNLLYALRE 247 (356)
T ss_pred CccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCC---hHHHHHHHHH
Confidence 8999999999999633 468999999877655431 111100000000 0 00000011111 1122233456
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
.+..+..+|++++.++..++++++.+.|++ ++++.
T Consensus 248 al~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 283 (356)
T cd06451 248 ALDLILEEGLENRWARHRRLAKALREGLEALGLKLL 283 (356)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 666666788999999999999999999987 56654
No 159
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.74 E-value=6.8e-16 Score=177.96 Aligned_cols=239 Identities=15% Similarity=0.161 Sum_probs=163.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCce-eee-cCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH----HHHhCCc
Q 001769 629 GYQEMFNNLGEWLCTITGFDSF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 702 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~-~l~-~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~----~a~~~G~ 702 (1016)
+..+.+.++++++++++|.+.. .+. .++++++. .++++.+. .++++|+++...|+++.. .++..|.
T Consensus 41 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al---~~~~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~ 112 (376)
T TIGR01977 41 RASREVEETRQLLAKLFNAPSSAHVVFTNNATTAL---NIALKGLL-----KEGDHVITTPMEHNSVARPLECLKEQIGV 112 (376)
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH---HHHHHhcc-----CCCCEEEECcchhhHHHHHHHHHHHHcCc
Confidence 3446778999999999998743 444 44554444 33344321 356899999888876543 3456799
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc
Q 001769 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 703 ~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
+++.++.++++.+|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....
T Consensus 113 ~~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~-~~~~i~~l~~~~~~~livD~a~~~g~~~~-~~~~ 187 (376)
T TIGR01977 113 EITIVKCDNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL-PIEEIGELAQENGIFFILDAAQTAGVIPI-DMTE 187 (376)
T ss_pred EEEEEecCCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC-CHHHHHHHHHHcCCEEEEEhhhccCccCC-Cchh
Confidence 99999998889999999999997 789999999985 689998 89999999999999999999986443322 2346
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccc-ccc-CCCCccccCCCCCC-C---C-cCCCCCCccCCccchhhHHH
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APF-LPSHPVVSTGGIPA-P---E-KSQPLGTIAAAPWGSALILP 854 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l-~~~-lpg~~~g~~g~~~~-r---e-~~~~~g~i~s~~~G~a~~~~ 854 (1016)
+|+|++++++||+++.| +|.|+++++++. .+. ..+........+.. . + .+.++.++ ..+.
T Consensus 188 ~~~D~~~~s~~K~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~--------~~~~ 254 (376)
T TIGR01977 188 LAIDMLAFTGHKGLLGP-----QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNT--------PGIA 254 (376)
T ss_pred cCCCEEEecccccccCC-----CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCH--------HHHH
Confidence 79999999999999633 356778877653 121 11110000000000 0 0 01111111 2223
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCcc
Q 001769 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPIL 893 (1016)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~ 893 (1016)
..++.+..+...|+..+.+++..+++++.++|++ ++++.
T Consensus 255 a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 295 (376)
T TIGR01977 255 GLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY 295 (376)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 3455677777788888999999999999999986 34554
No 160
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.74 E-value=7.3e-17 Score=185.99 Aligned_cols=260 Identities=19% Similarity=0.209 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.. +..++|.++..++ +++ . .++++|++++..++... ..+...|++++.++.
T Consensus 54 ~~~le~~la~l~g~~~~-~~~~sG~~ai~~~-~~l---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 54 RGVLEQAIADLEGGDQG-FACSSGMAAIQLV-MSL---F-----RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHH-HHH---h-----CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 35788999999999875 6677887655332 221 1 25678999887776432 234568999999986
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.+. +.+.+..|.+.|+|+++
T Consensus 124 -----~d~~~l~~~i~---~~tklv~le~P~NP~~~~~-dl~~I~~la~~~g~~lIvD~t~--~~~~~~~p~~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT---PNTKAIFIETPTNPLMQET-DIAAIAKIAKKHGLLLIVDNTF--YTPVLQRPLEEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCC--ccccccCchhcCCcEEE
Confidence 48999999997 789999999996 467666 8999999999999999999664 34445678788999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|++|+++ +| ++..+|+++++ +++...+... ....+...+ ++ -+|+...|.+.
T Consensus 193 ~S~sK~~~-g~--~d~~~G~iv~~~~~l~~~~~~~-------------~~~~g~~~s-~~---------~a~l~~~~l~t 246 (366)
T PRK08247 193 HSATKYLG-GH--NDVLAGLVVAKGQELCERLAYY-------------QNAAGAVLS-PF---------DSWLLIRGMKT 246 (366)
T ss_pred eecceecc-CC--CceeeeEEecChHHHHHHHHHH-------------HHhcCCCCC-hH---------HHHHHHhccCc
Confidence 99999996 21 33356778776 4443322100 011121111 22 24555567788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCCceeeEEEEEecCchhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLKEELDRYCDALISIREEIAQIENGKADIHNNV 944 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~~~~he~i~~~~~~~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~ 944 (1016)
+..+.++..+|+..+++.|+++ ..|.|||..+.+ .+.+++ .+..++|++.|+.+ .-+.++ | +.+.
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~----sf~~~~-~~~~~~~~~~l~~~-~~~~sl--g----~~~s 314 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGML----SFRLQD-EEWVNPFLKSLKLI-TFAESL--G----GVES 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEE----EEEECC-HHHHHHHHHcCCcc-eEccCC--C----CCce
Confidence 8899999999999999999985 346688755433 344543 45678999999876 334454 4 5678
Q ss_pred cccCCCCC
Q 001769 945 LKGAPHPP 952 (1016)
Q Consensus 945 l~~ap~~~ 952 (1016)
+...|.++
T Consensus 315 l~~~p~~~ 322 (366)
T PRK08247 315 FITYPATQ 322 (366)
T ss_pred EEECCccc
Confidence 88888876
No 161
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.74 E-value=9.1e-16 Score=175.39 Aligned_cols=311 Identities=16% Similarity=0.115 Sum_probs=207.9
Q ss_pred HHHHHHHHHHhcCC--CccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCC
Q 001769 151 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM 228 (1016)
Q Consensus 151 ~e~~~~l~~la~~n--~~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~ 228 (1016)
.+.++|+++--+++ ...++|||...+|....+.+. .+...+ |..+.+.++++.+|+++|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~~~~-~~~~~~---------------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEEDLE-LLETYV---------------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHHHHH-HHHHhc---------------CCHHHHHHHHHHHHHHcCCCc
Confidence 45677887666665 568999999998877776653 444321 344778889999999999988
Q ss_pred ccEEEccchHHHHHHHHHHhccccCCCCEEEEc---CCCCHHHHHHHHHhhcCCCeEEEE-eCchhhhccCCCEeEEEEE
Q 001769 229 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA---SNCHPQTIDICITRADGFDIKVVV-SDLKDIDYKSGDVCGVLVQ 304 (1016)
Q Consensus 229 anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs---~~~Hps~~~~l~~~a~~~gi~v~~-vd~~~L~~l~~~t~~V~v~ 304 (1016)
.++.+++||+.++.+++.++. +++|+|+++ ...|+++...++. .|.++.. .++++++. .+++++|+++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~---~~gd~Vli~~~d~p~~~s~~~~~~l----~ga~~~~~~~l~~l~~-~~~~~lIiit 143 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALE---PPGRKVVHYLPEKPAHPSIPRSCKL----AGAEYFESDELSELKK-IDGTSLVVIT 143 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhC---CCCCEEEECCCCCCCchhHHHHHHH----cCCEEeccCCHHHHhh-CcCceEEEEE
Confidence 889999999999988888774 378999864 4699999888653 3666543 24444433 3467888888
Q ss_pred cCCCCeee---ccHHHHHHHHHhCCcEEEEEeccccccCCC-----CCCcccceEEEecC-ccccccCCCCCcceEEEEe
Q 001769 305 YPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT 375 (1016)
Q Consensus 305 ~pn~~G~i---~dl~eI~~lah~~GalviV~a~~~alg~l~-----~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~ 375 (1016)
.++++|.+ .||++|+++|+++|++++| +++++.++.. +..++|+|++++|. |.+ +|+..||+++
T Consensus 144 g~s~~G~v~~~~~L~~i~~la~~~~~~liv-DEAy~~~~~~~~~~~~~~~~~~divv~s~SKal------aG~r~G~v~~ 216 (346)
T TIGR03576 144 GSTMDLKVVSEEDLKRVIKQAKSKEAIVLV-DDASGARVRRLYGQPPALDLGADLVVTSTDKLM------DGPRGGLLAG 216 (346)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEE-ECCccccccccCCCCCHHHcCCcEEEeccchhc------cccceEEEEe
Confidence 77899998 7999999999999999999 4566654321 11246789999987 744 3456789999
Q ss_pred ehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH-HHHhCcccHHHHHHHHHHHH
Q 001769 376 SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY-AVYHGPEGLKTIAQRVHGLA 454 (1016)
Q Consensus 376 ~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y-~~~~g~~Gl~~ia~~~~~~a 454 (1016)
++++++.|.. ...+++.|.+++ ...|+.. +..+ ..+.+.++..++.
T Consensus 217 ~~~li~~l~~-----------------------------~~~~~~~s~~~~-~~~aa~~aL~~~---~~~~~~~~l~~r~ 263 (346)
T TIGR03576 217 RKELVDKIKS-----------------------------VGEQFGLEAQAP-LLAAVVRALEEF---ELSRIRDAFKRKE 263 (346)
T ss_pred CHHHHHHHHH-----------------------------hhcCcccCccHH-HHHHHHHHHhhc---cHHHHHHHHHHHH
Confidence 9888776610 011112111222 2222221 1221 2355667777888
Q ss_pred HHHHHHHhcCCCeEEcCCC-CccEEEEecCC---HHHHHHHHHHcCceeecc-----cCCeEEEEeccCC-CHHHHHHHH
Q 001769 455 GTFALGLKKLGTVEVQGLP-FFDTVKVKCAD---AHAIASAAYKIEMNLRVV-----DSNTVTASFDETT-TLEDVDKLF 524 (1016)
Q Consensus 455 ~~L~~~L~~~G~~~l~~~~-~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~-----~~~~lris~te~~-t~edid~ll 524 (1016)
+++.+.+++++ +..++ .| +.++++. ...+.+.|.++||.+++. .++.+|||+.... ++.+.+.|+
T Consensus 264 ~~~~~~l~~~~---~~~~~~~f--~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~ 338 (346)
T TIGR03576 264 EVYLRLFDKLN---VERTPTGF--VIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLV 338 (346)
T ss_pred HHHHHHHHhCC---CCcCCCeE--EEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHH
Confidence 88877777443 32211 12 3335542 345556666789987653 1578999998533 334799999
Q ss_pred HHHhCC
Q 001769 525 IVFAGG 530 (1016)
Q Consensus 525 ~aL~~~ 530 (1016)
++|+..
T Consensus 339 ~al~~~ 344 (346)
T TIGR03576 339 EAVKDS 344 (346)
T ss_pred HHHHhc
Confidence 999753
No 162
>PRK14012 cysteine desulfurase; Provisional
Probab=99.74 E-value=1.5e-15 Score=177.31 Aligned_cols=230 Identities=13% Similarity=0.154 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHhCCCce-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH---HhCCcEEEEE
Q 001769 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSV 707 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a---~~~G~~vv~v 707 (1016)
+.+.++++.+++++|.+.. .++.++|++|...++.++..+. . +++++|+++..+|.++...+ ...|++++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~--~--~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v 124 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFY--Q--KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhh--c--CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE
Confidence 5678999999999999854 3455666666544444442211 1 25689999998887765543 3469999999
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcE
Q 001769 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1016)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi 786 (1016)
+++++|.+|+++|+++|+ ++|++|+++++ |.+|.+. |+++|+++||++|+++++|+++..+... .....+++|+
T Consensus 125 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~~D~ 199 (404)
T PRK14012 125 DPQSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERGIIFHVDAAQSVGKVP-IDLSKLKVDL 199 (404)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchh-hHHHHHHHHHHcCCEEEEEcchhcCCcc-cCcccCCCCE
Confidence 999899999999999998 78999999987 5789998 8999999999999999999998644332 2345678999
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+++|+||.+ |++|.|+++++++....+.....|. + .. +..+.++.++. ....+..|..++. .
T Consensus 200 ~~~s~~K~~------gp~g~G~l~~~~~~~~~~~~~~~g~-~-~~-~~~~~gt~~~~-----~~~~l~~al~~~~----~ 261 (404)
T PRK14012 200 MSFSAHKIY------GPKGIGALYVRRKPRVRLEAQMHGG-G-HE-RGMRSGTLPTH-----QIVGMGEAARIAK----E 261 (404)
T ss_pred EEEehhhcc------CCCceEEEEEecCCCCCCCceecCC-C-cc-CCccCCCcCHH-----HHHHHHHHHHHHH----h
Confidence 999999965 3336788888865432222112221 1 00 00111111211 1112222233332 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001769 867 GLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~ 888 (1016)
++..+.++...+++++.+.|++
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~ 283 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKD 283 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc
Confidence 4666788889999999999875
No 163
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.74 E-value=1.7e-15 Score=174.25 Aligned_cols=278 Identities=17% Similarity=0.151 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-- 288 (1016)
..+.++++.+|+++|++ ++.+++|+|.++.+++.++. +++|+|++++..|.+....+ +..|++++.++.
T Consensus 44 ~~~~~l~~~la~~~g~~--~i~~~~g~t~al~~~l~~~~---~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGMD--EARVTPGAREGKFAVMHSLC---EKGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCCc--eEEEeCCHHHHHHHHHHHhc---CCCCEEEEcCCcchHHHHHH----HhcCCEEEEEecCC
Confidence 45778899999999994 58899999988887777663 37899999999999887654 346888877653
Q ss_pred --------hhhhc-cC-------CCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccce
Q 001769 289 --------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGAD 350 (1016)
Q Consensus 289 --------~~L~~-l~-------~~t~~V~v~~pn-~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaD 350 (1016)
+++++ ++ +++++|++++|+ .+|.+.|+++|+++||++|++++|+ ++.+.+.+. +..++|+|
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD-~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLN-GAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEE-CCcccCCcCCCHHHcCCC
Confidence 23443 43 378899999985 6999999999999999999999994 455555442 34578999
Q ss_pred EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHH
Q 001769 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1016)
Q Consensus 351 ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~ 429 (1016)
++++|+ |.|+.| +.+|++++++++.+++-... .+ |.+. + .....+|++. .+..++
T Consensus 194 ~~~~s~~K~l~~~-----~~~G~l~~~~~~~~~l~~~~---------~~-~~~~-----~-~~~~~~~~~~---~~~~~~ 249 (361)
T cd06452 194 FIVGSGHKSMAAS-----APIGVLATTEEWADIVFRTS---------QM-FKIK-----E-VELLGCTLRG---APLVTL 249 (361)
T ss_pred EEEecCCccccCC-----CCeEEEEECHHHHHHHhccc---------cc-cccc-----e-eeeeccccCc---hHHHHH
Confidence 999998 777533 24789999988877652110 00 1110 0 0001123222 233334
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEEcCC--CCccEEEEecCC-----------HHHHHHHHHHc
Q 001769 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PFFDTVKVKCAD-----------AHAIASAAYKI 495 (1016)
Q Consensus 430 ~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G~~~l~~~--~~~~~v~i~~~~-----------~~~v~~~L~~~ 495 (1016)
++++ .+. .+-++. ..+..+++++|++.|+++ | ++++.. ...+.+.++.+. +.++.+.|.++
T Consensus 250 ~~al--~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g-~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 324 (361)
T cd06452 250 MASF--PHV-KERVKR-WDEEVEKARWFVAELEKIEG-IKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKR 324 (361)
T ss_pred HHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHhcCCC-eEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHc
Confidence 4443 111 122333 333456779999999999 6 988631 111223333321 34699999999
Q ss_pred Cceeeccc-CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 496 EMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 496 GI~~~~~~-~~~lris~te~~t~edid~ll~aL~ 528 (1016)
||.+.... ...+|++. ..+|++|++.++++|+
T Consensus 325 gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~ 357 (361)
T cd06452 325 GIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFK 357 (361)
T ss_pred CceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHH
Confidence 99864322 34678877 4479999999999996
No 164
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.74 E-value=1e-15 Score=178.39 Aligned_cols=240 Identities=17% Similarity=0.178 Sum_probs=165.2
Q ss_pred hhhHHHHHHHHHHHHHHHhCC-Cceeee-cCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhC
Q 001769 627 AQGYQEMFNNLGEWLCTITGF-DSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMC 700 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~-~~~~l~-~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~ 700 (1016)
.+...+.+.++++.+++++|. +...+. .+++++|. .++++.+... .-.++++||+++..|.++- ..++..
T Consensus 58 ~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i---~~~~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~ 133 (401)
T PRK10874 58 AQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESI---NLVAQSYARP-RLQPGDEIIVSEAEHHANLVPWLMVAQQT 133 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHH---HHHHHHhhhc-cCCCcCEEEECCcchHHHHHHHHHHHHHh
Confidence 345677888999999999999 443443 44555444 3344443210 1135689999999887642 335678
Q ss_pred CcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 701 GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 701 G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
|++++.++++.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ..
T Consensus 134 g~~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~l~~~~g~~~ivD~a~~~g~~~~-~~ 208 (401)
T PRK10874 134 GAKVVKLPLGADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCP-DLARAITLAHQAGMVVMVDGAQGAVHFPA-DV 208 (401)
T ss_pred CCEEEEEecCCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEECCcccccccC-Cc
Confidence 9999999998889999999999997 889999999985 689998 89999999999999999999985433322 33
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC-------CCCCC----CcCCCCCCccCCccc
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-------GIPAP----EKSQPLGTIAAAPWG 848 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g-------~~~~r----e~~~~~g~i~s~~~G 848 (1016)
.++++|++++|+||.| |.+|+|++++++++.+.++....+.+. .+... ..+.++.++.
T Consensus 209 ~~~~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~----- 277 (401)
T PRK10874 209 QALDIDFYAFSGHKLY------GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVA----- 277 (401)
T ss_pred hhcCCCEEEEeccccc------CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHH-----
Confidence 4678999999999966 345689999998877766543222110 00000 0011122221
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
....+..|..++. ..|+..+.+++..+++++.+.|++.
T Consensus 278 ~~~al~~al~~l~---~~g~~~~~~~~~~l~~~l~~~l~~~ 315 (401)
T PRK10874 278 GVIGLSAALEWLA---DIDINQAESWSRSLATLAEDALAKL 315 (401)
T ss_pred HHHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 1223333444444 4556677788888999999999864
No 165
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=6.2e-17 Score=186.82 Aligned_cols=263 Identities=17% Similarity=0.172 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc-ccH---HHHHhCCcEEEEEcC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg-~~~---~~a~~~G~~vv~v~~ 709 (1016)
..++++.++++.|.+.+ +.++||+.|..++++++- +++|+||++...+| ++. ..+..+|++++++++
T Consensus 66 ~~~lE~~la~leg~~~a-v~~sSG~aAi~~al~all--------~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 66 VQAFEEKYAVLENAEHA-LSFSSGMGAITSAILSLI--------KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 45788999999998864 677888876655554431 35789999875544 343 235578999999998
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcEEE
Q 001769 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1016)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi~~ 788 (1016)
++...++ ++ .++|++|++++|+ .++.+. ||++|+++||++| ++||+++ +.+...+|...|+|+++
T Consensus 137 ~~~~~~~-------l~--~~~tklv~~e~~snpt~~v~-Di~~I~~la~~~~--lvVD~t~--~s~~~~~pl~~gaDivv 202 (384)
T PRK06434 137 DRLNSLD-------FD--PSNYDLIYAESITNPTLKVP-DIKNVSSFCHEND--VIVDATF--ASPYNQNPLDLGADVVI 202 (384)
T ss_pred CChhhee-------ec--CCCeeEEEEEcCCCCCceee-cHHHHHHHHHHcC--eEEECCC--CCcccCCchhcCCCEEE
Confidence 5422222 33 1479999999985 566665 9999999999998 5679764 45556778899999999
Q ss_pred eCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+|+||+++.+ |+--+|++++++ ++...+.. . ....|...+ ++ -+||...|.+.
T Consensus 203 ~S~tK~i~G~---~d~~gG~vv~~~~~~~~~~~~-~------------~~~~G~~~~-~~---------~A~l~~~gL~t 256 (384)
T PRK06434 203 HSATKYISGH---SDVVMGVAGTNNKSIFNNLVE-R------------RKTLGSNPD-PI---------QAYLALRGLKT 256 (384)
T ss_pred eecccccCCC---CCceEEEEecCcHHHHHHHHH-H------------HHhcCCCCC-HH---------HHHHHHhCCCc
Confidence 9999999622 222357777754 33332210 0 001222221 11 46788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCccccCCCC------ceeeEEEEEecCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 001769 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNG------TVAHEFIVDLRGLKEELDRYCDALISIREEIAQIENGKA 938 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~---~~v~y~g~~~------~~~he~i~~~~~~~~~ld~f~~~l~~i~~e~~~~~~g~~ 938 (1016)
|..+.+++.+||..+++.|+++ -+|.|||+.- -+.--+.|++++ .++.++|+++|+.+ ..+.++ |
T Consensus 257 L~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~l~-~~~~sl--G-- 330 (384)
T PRK06434 257 LGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-MEDVHKFIRNLEIP-MVAASL--G-- 330 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-HHHHHHHHHhCCcc-eEccCC--C--
Confidence 9999999999999999999985 4799998620 011124456654 67889999999977 345665 6
Q ss_pred CCCCCccccCCCCCC
Q 001769 939 DIHNNVLKGAPHPPS 953 (1016)
Q Consensus 939 ~~~~~~l~~ap~~~~ 953 (1016)
+.++|..+|.++.
T Consensus 331 --~~~sl~~~p~~~~ 343 (384)
T PRK06434 331 --GVESLITLPVETS 343 (384)
T ss_pred --CCCeeeECCCccc
Confidence 7899999998773
No 166
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=3.4e-16 Score=185.36 Aligned_cols=301 Identities=18% Similarity=0.154 Sum_probs=182.1
Q ss_pred HHHHHHHHHHhccccCCCccccccccccCCCChhhhhccccc--ccccccCCCCCchhhhhHHHHHH-HHHHHHHHHhCC
Q 001769 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTW--PSFANIHPFAPADQAQGYQEMFN-NLGEWLCTITGF 647 (1016)
Q Consensus 571 ~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~--~~f~~~~P~~p~e~~qG~~e~~~-el~~~laeL~G~ 647 (1016)
.|+...+++-..++ +..+.|=.++....+.+.....+. ..|...+|-.......-..+.++ ..++.+++++|.
T Consensus 20 ~~~~~~~~~~~~~~----~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a 95 (452)
T PTZ00094 20 PELYELIEKEKERQ----IEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGL 95 (452)
T ss_pred HHHHHHHHHHHHHH----HcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCC
Confidence 35555555432222 223455555555555544433221 12222234332111112234444 367799999999
Q ss_pred Cce----eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHH----------hCCcEEEEEcCCCCC
Q 001769 648 DSF----SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA----------MCGMKIVSVGTDAKG 713 (1016)
Q Consensus 648 ~~~----~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~----------~~G~~vv~v~~d~~g 713 (1016)
+.. +++++||++++.+++.++ . +++++|++++..|+.+...+. ..+++++.++++.+|
T Consensus 96 ~~~~~~~~~~~~sgt~an~~v~~al---~-----~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 167 (452)
T PTZ00094 96 DPEEWGVNVQPYSGSPANFAVYTAL---L-----QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKG 167 (452)
T ss_pred CcccceeecCCCchHHHHHHHHHHh---c-----CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCC
Confidence 853 355677877665444444 1 256899999999998765431 123556677778789
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc---CCCCccCCcEEEeC
Q 001769 714 NINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TSPGYIGADVCHLN 790 (1016)
Q Consensus 714 ~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l---~~pg~~GaDi~~~s 790 (1016)
.+|+++|+++++++ +++.|++.. +.+|... |+++|+++||++|++++||++|..++.+. ..|. .++|+++++
T Consensus 168 ~id~~~L~~~l~~~--~~~lvi~~~-s~~g~~~-di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~~S 242 (452)
T PTZ00094 168 LIDYDKLEELAKAF--RPKLIIAGA-SAYPRDI-DYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF-PYADVVTTT 242 (452)
T ss_pred CcCHHHHHHHHHHh--CCCEEEEeC-CCCCCcc-CHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC-CCCcEEEcC
Confidence 99999999999632 445566554 4578887 99999999999999999999997666532 1233 389999999
Q ss_pred ccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHH
Q 001769 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1016)
Q Consensus 791 ~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~ 870 (1016)
+||||+ ||.+|++++++++.+.+....-. .......+++ +...++...+.+..+-..++++
T Consensus 243 ~hK~l~------GP~Gg~l~~~~~~~~~l~~~~~~-----------~~~p~~~G~~--~~~~iaal~~al~~~~~~~~~~ 303 (452)
T PTZ00094 243 THKSLR------GPRSGLIFYRKKVKPDIENKINE-----------AVFPGLQGGP--HNHQIAAIAVQLKEVQSPEWKE 303 (452)
T ss_pred CccCCC------CCCceEEEEecccchHHHHhhcc-----------ccCCCCCCCc--hHHHHHHHHHHHHHHhChhHHH
Confidence 999994 45447788776544322111000 0000000111 1122223344556665567788
Q ss_pred HHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEec
Q 001769 871 ASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLR 910 (1016)
Q Consensus 871 ~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~ 910 (1016)
+.++...+++++++.|++ ++++..++.+ .|-.++++.
T Consensus 304 ~~~~i~~l~~~l~~~L~~~g~~v~~~~~~---~~~~~v~~~ 341 (452)
T PTZ00094 304 YAKQVLKNAKALAAALEKRGYDLVTGGTD---NHLVLVDLR 341 (452)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEecCCCC---CceEeecCC
Confidence 899999999999999976 6888765422 244666664
No 167
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.73 E-value=8.7e-17 Score=184.75 Aligned_cols=265 Identities=19% Similarity=0.217 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-- 288 (1016)
..|.+.|+..|+++|++.+.. +++|+|.++.++++++. ++||+|||++++|.|+...+.. .|++++++++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~f-lvnGsT~g~~a~i~a~~---~~gd~VLv~RN~HkSv~~alil----~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFF-LVNGSTSGNQAMIMALC---RPGDKVLVDRNCHKSVYNALIL----SGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEE-ESSHHHHHHHHHHHHHT---TTTCEEEEETT--HHHHHHHHH----HTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEE-EecCchHHHHHHHHHhc---CCCCEEEEcCCcHHHHHHHHHH----cCCeEEEecCCc
Confidence 467889999999999997533 67899999999999874 3899999999999999998753 3788887654
Q ss_pred ----------------hhhhc-c--CCCEeE---EEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEecccc-----ccCC
Q 001769 289 ----------------KDIDY-K--SGDVCG---VLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA-----LTIL 341 (1016)
Q Consensus 289 ----------------~~L~~-l--~~~t~~---V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~a-----lg~l 341 (1016)
+++++ + .++.++ |++++|||+|.+.|+++|+++||++|.+++|+ ++|. ..+.
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvD-EAhGah~~F~~lp 216 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVD-EAHGAHFGFHPLP 216 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE--TT-TTGGCSGGG
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEE-ccccccccCCCCc
Confidence 22333 2 345444 99999999999999999999999999999993 3331 2233
Q ss_pred CCCCcccce-------EEEecC-ccccccCCCCCcceEEEEeehhh-hhcCCCceEeeeecCCCCcceeeeccccccccc
Q 001769 342 KPPGELGAD-------IVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1016)
Q Consensus 342 ~~pg~~GaD-------ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l-~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiR 412 (1016)
.+.-.+||| +++.|. |.++.- . +++++.++.+. ++ +.|
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~al-t----Qts~lh~~~~~~v~----------------------------~~~ 263 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPAL-T----QTSMLHVKGDRIVD----------------------------HER 263 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS--T----T-EEEEEETCCCTT----------------------------HHH
T ss_pred cchhhccCccccccceeeeechhhccccc-c----cceEEEecCCCccc----------------------------HHH
Confidence 344678999 999999 666532 2 45788887653 11 001
Q ss_pred ccccCCccchhhHHHHHHHHHH--HHHh-CcccHHHHHHHHHHHHHHHHHHH---hcCCCeEEcCC------C-------
Q 001769 413 RDKATSNICTAQALLANMAAMY--AVYH-GPEGLKTIAQRVHGLAGTFALGL---KKLGTVEVQGL------P------- 473 (1016)
Q Consensus 413 RekaTsnicT~~~l~a~~Aa~y--~~~~-g~~Gl~~ia~~~~~~a~~L~~~L---~~~G~~~l~~~------~------- 473 (1016)
...+-+-.-|+++.+.++|++- ..++ +.+| +++.++..+++..++++| +++.+++++++ .
T Consensus 264 ~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 342 (417)
T PF01276_consen 264 VNEALSMHQTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPG 342 (417)
T ss_dssp HHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCcc
Confidence 1111122235678889999883 2355 4555 567788888999999999 55533776532 1
Q ss_pred ------------C--cc--EEEEecC-----------C--HHHHHHHHHHcCceeecccCCeEEEEeccCCCHH
Q 001769 474 ------------F--FD--TVKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 518 (1016)
Q Consensus 474 ------------~--~~--~v~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~e 518 (1016)
. +| -++|.++ + +..+.+.|+++||.++..+...+++-++...|++
T Consensus 343 ~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 343 ENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp -TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred ccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 1 22 2555541 2 7789999999999999888889999999888765
No 168
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=9.9e-16 Score=176.91 Aligned_cols=211 Identities=14% Similarity=0.121 Sum_probs=158.3
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~L 291 (1016)
.+++.||+|.|.+. +.++.+|++|+.++++++ + ++||+||+++..|..+...++..++.+|+++.++|. +++
T Consensus 66 ~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~l-l--~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 66 SLQEAMCELEGGAG--CALYPCGAAAVANAILAF-V--EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred HHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHH-c--CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 46689999999876 889999999999888776 3 379999999999999999987777789999999875 456
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCC--cEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~G--alviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++ ++++|++|+++.| |.+|.+.||++|+++||++| ++++| ++.++.+.+..|.++||||+++|+ |++++|-..
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvV-DnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv- 218 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMI-DNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDA- 218 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEE-ECCCccccccCHHHcCCcEEEEcCcccccCCCcc-
Confidence 66 8889999999987 78999999999999999985 99999 466777888889999999999999 767654222
Q ss_pred CcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 367 GP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
.+|++++++++...+- ..++..|. .. ++. ..|+...|-+-|.-.
T Consensus 219 --~~G~v~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR 262 (395)
T PRK08114 219 --MIGTAVANARCWEQLR-------------------------ENSYLMGQ--MV--DAD-----TAYMTSRGLRTLGVR 262 (395)
T ss_pred --eeEEEEcCHHHHHHHH-------------------------HHHHhccC--CC--CHH-----HHHHHHcCCCcHHHH
Confidence 3577776665433220 00011110 00 110 123445555555566
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.+|..++|..+++.|++.+.++
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 6777899999999999885454
No 169
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=3.9e-16 Score=182.30 Aligned_cols=253 Identities=18% Similarity=0.199 Sum_probs=174.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH------HHhcC-----------------CCCCCEEE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY------HKARG-----------------DHHRNVCI 684 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~------~~~~g-----------------~~~~~~Vl 684 (1016)
+..-++.....+..+++||.+.+++++.||+++++++++++..- +..+| .-.+|+|+
T Consensus 91 ~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~ 170 (493)
T PRK13580 91 QNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLL 170 (493)
T ss_pred chHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEE
Confidence 34445666677899999999999999999999998888877531 00011 01267888
Q ss_pred EcCCCcccc---HHHHHhCC--cEEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHH
Q 001769 685 IPVSAHGTN---PATAAMCG--MKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHD 758 (1016)
Q Consensus 685 v~~saHg~~---~~~a~~~G--~~vv~v~~d~-~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~ 758 (1016)
..+..||-| .......| ++++..++|+ +|.+|++++++.++ +++..|+++..++++... |+++|+++|++
T Consensus 171 ~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~~~-dl~~i~eia~~ 246 (493)
T PRK13580 171 GMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPRRV-NFAKLREIADE 246 (493)
T ss_pred eecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---hcCCEEEEeCccccCCCc-CHHHHHHHHHH
Confidence 876666543 21122233 6777777874 59999999999998 677777777765545565 89999999999
Q ss_pred cCcEEEEEccccccccCc-C-----CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCC
Q 001769 759 NGGQVYMDGANMNAQVGL-T-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1016)
Q Consensus 759 ~g~lv~vDga~~~a~~~l-~-----~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~ 832 (1016)
+|++++||+||..++.+. . .|. .++||+++++||+|. ||.+|+|++++++.+++-.. .
T Consensus 247 ~gA~L~VD~AH~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~------GP~GG~I~~~~~l~~~L~~a-~-------- 310 (493)
T PRK13580 247 VGAVLMVDMAHFAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLR------GPRGGLVLAKKEYADAVDKG-C-------- 310 (493)
T ss_pred cCCEEEEECchhhceeccccchhhcCCC-CCCcEEEeCChhhcc------CCCeEEEEecHHHHHHHhhC-C--------
Confidence 999999999998766542 1 232 379999999999993 56568999998877665100 0
Q ss_pred CCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 833 re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
+.+-+++. ...+++.+.+....+. .+.++..++.+.|+++|++.|.+ ++++...| ...|-+.+++.+
T Consensus 311 -------P~i~gg~l-~p~iAA~avAl~e~~~-~ef~~y~~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~ 378 (493)
T PRK13580 311 -------PLVLGGPL-PHVMAAKAVALAEART-PEFQKYAQQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTS 378 (493)
T ss_pred -------CcccCCCc-cHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCC
Confidence 00001111 1133344444444433 34577899999999999999987 78886432 345888888865
Q ss_pred c
Q 001769 912 L 912 (1016)
Q Consensus 912 ~ 912 (1016)
.
T Consensus 379 ~ 379 (493)
T PRK13580 379 F 379 (493)
T ss_pred H
Confidence 4
No 170
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.73 E-value=9.2e-16 Score=180.11 Aligned_cols=326 Identities=17% Similarity=0.232 Sum_probs=214.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCcccc----ccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHH
Q 001769 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYKS----FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLL 214 (1016)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~----~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~ 214 (1016)
-.+| +.++.+.+++.++..+..++..+.. +...+.-+..+|+...+.+...- .-..-.++.+.++.+.-.
T Consensus 31 ~~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~----~~nl~d~~~~p~a~~~E~ 104 (460)
T COG0076 31 RMAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSAL----NKNLGDPDESPAAAELEE 104 (460)
T ss_pred ccCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHH----hhcCCCcccChhHHHHHH
Confidence 3455 5789999999999999777765422 23334345556666653333210 011123345567777888
Q ss_pred HHHHHHHHHcCC-CCccEEEccchHHHHHHHHHHhccc-c---C-------CCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001769 215 NFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNIQ-K---G-------KKKTFIIASNCHPQTIDICITRADGFDIK 282 (1016)
Q Consensus 215 e~q~~iA~L~G~-~~anasl~~~~Taa~eA~~~a~~~~-~---~-------~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~ 282 (1016)
+.-.|+++|+|. +.+...++.|||.++.-.+++.|.. + . ...+||+|...|.|+.+.++. .|++
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~----lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY----LGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHH----hCCC
Confidence 888999999999 5556778899997776444443322 0 0 123799999999999998754 3554
Q ss_pred EEEe---------Cchhhhc-cCCCEeE--EEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccc--cCCCCCCcc
Q 001769 283 VVVS---------DLKDIDY-KSGDVCG--VLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLAL--TILKPPGEL 347 (1016)
Q Consensus 283 v~~v---------d~~~L~~-l~~~t~~--V~v~~pn-~~G~i~dl~eI~~lah~~GalviV~a~~~al--g~l~~pg~~ 347 (1016)
.+.+ |+++|++ +++++.. |+.+.++ .+|.++||++|+++|+++|+++||++-.-++ ..+...+.|
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchh
Confidence 4443 3456766 7777776 7777774 6899999999999999999999996522111 122233443
Q ss_pred -----cceEEEecCcc-ccccCCCCCcceEEEEeehh--hhhcCC--CceEeeeecCCCCcceeeecccccccccccccC
Q 001769 348 -----GADIVVGSAQR-FGVPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1016)
Q Consensus 348 -----GaDivvgs~k~-lg~P~g~GGP~~Gfl~~~~~--l~~~lp--grivG~s~d~~g~~~~~l~lqtreqhiRRekaT 417 (1016)
+||-++.+++| +..|.+ +|++.+|++ +.+.+- ..+.+.+ +.+.+.+.. +|
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~~-----~G~il~rd~e~l~~~~~~~~~yl~~~----~~~~~ti~~-sr---------- 320 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPIG-----CGVVLFRDEEALRRILIFADYYLPGG----GIPNFTILG-SR---------- 320 (460)
T ss_pred hcCCCCceEEEECcccccCCCCC-----ceEEEEECHHHhhhhhhcccccCCCC----CcCceeEee-cc----------
Confidence 79999999955 455754 556777764 433331 1111100 112233221 11
Q ss_pred CccchhhHHHHHHHHHH--HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC----HHHHHHH
Q 001769 418 SNICTAQALLANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASA 491 (1016)
Q Consensus 418 snicT~~~l~a~~Aa~y--~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~----~~~v~~~ 491 (1016)
.+- .+++.| +.++|.+|++++.+++.+++++|+++|++.|.++++++|..+.|+|+.++ ..+....
T Consensus 321 ------~~~--~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~ 392 (460)
T COG0076 321 ------PGR--QALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER 392 (460)
T ss_pred ------chH--HHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence 111 122222 58999999999999999999999999999977999988888899998754 4566677
Q ss_pred HHHcCceeecc
Q 001769 492 AYKIEMNLRVV 502 (1016)
Q Consensus 492 L~~~GI~~~~~ 502 (1016)
+.+.|+.+...
T Consensus 393 ~~~~gw~v~~~ 403 (460)
T COG0076 393 LDRRGWQVPAQ 403 (460)
T ss_pred HHhcCceeecc
Confidence 77789987543
No 171
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.72 E-value=4.1e-16 Score=181.98 Aligned_cols=243 Identities=11% Similarity=0.050 Sum_probs=167.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCc--eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH--HHHHhCCcE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMK 703 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~--~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~--~~a~~~G~~ 703 (1016)
++..+++.++++++++++|.+. ..+++++|+++.+ +++.... +++++||+++..|.++. ..++..|.+
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~---~a~~~~~-----~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~ 109 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWE---SALTNTL-----SPGDKVVSFRIGQFSLLWIDQMQRLNFD 109 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH---HHHHhcC-----CCCCEEEEeCCCchhHHHHHHHHHcCCc
Confidence 4567789999999999999974 3466666655443 3333221 36789999987775553 346778999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCCccccccHHHHHHH--HHHcCcEEEEEccccccccCcCCC
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKI--IHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~-~~t~~v~i~~P-n~~G~i~~di~~I~~i--a~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
++.++.++++.+|+++++++++++. +++++|+++++ |.+|.+. |+++|+++ ||++|+++++|+++..+... ...
T Consensus 110 v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~-id~ 187 (401)
T PLN02409 110 VDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHPALLLVDGVSSIGALD-FRM 187 (401)
T ss_pred eEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccCcEEEEEcccccCCcc-ccc
Confidence 9999998766789999999998311 27899999986 5789998 89999999 99999999999988643321 234
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCC-----CccccCCCCCCCCcC----CCCCCccCCccchh
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-----HPVVSTGGIPAPEKS----QPLGTIAAAPWGSA 850 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg-----~~~g~~g~~~~re~~----~~~g~i~s~~~G~a 850 (1016)
.++|+|+++.++||||+.| +|+|++++++++.+.+.. ...++. ........ ..|.++. ..
T Consensus 188 ~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~Tp~~~-----~~ 256 (401)
T PLN02409 188 DEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAKSPRVFFDWA-DYLKFYKLGTYWPYTPSIQ-----LL 256 (401)
T ss_pred cccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCCCCCeecCHH-HHHHHHhcCCCCCCCccHH-----HH
Confidence 6789999999999999643 578999999876544321 111110 00000000 0111111 11
Q ss_pred hHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccc
Q 001769 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILF 894 (1016)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y 894 (1016)
..+. ..+..+-.+|+.++.+++..+++++.+.|++ ++++.-
T Consensus 257 ~al~---~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~ 298 (401)
T PLN02409 257 YGLR---AALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCT 298 (401)
T ss_pred HHHH---HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 2233 3344444567888889999999999999986 455543
No 172
>PRK02948 cysteine desulfurase; Provisional
Probab=99.72 E-value=2.3e-15 Score=174.21 Aligned_cols=236 Identities=14% Similarity=0.193 Sum_probs=163.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH---HHhCCcEE
Q 001769 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKI 704 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~---a~~~G~~v 704 (1016)
-..+.++++++.+++++|.+...+..++| +++.. ++++.+.... ..++++|+++...|.++... ++..|+++
T Consensus 40 ~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~---~~~~~~~~~~-~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v 115 (381)
T PRK02948 40 TASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNY---LAIQSLLNAL-PQNKKHIITTPMEHASIHSYFQSLESQGYTV 115 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHH---HHHHHHHHhc-cCCCCEEEECCcccHHHHHHHHHHHhCCCEE
Confidence 34567889999999999987655544444 44443 3333332211 12467899999999887654 45679999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccC
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~G 783 (1016)
+.++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++.++...+ ...+++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~vivD~~~~~g~~~~-~~~~~~ 190 (381)
T PRK02948 116 TEIPVDKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQ-PIAEIGALLKKYNVLFHSDCVQTFGKLPI-DVFEMG 190 (381)
T ss_pred EEEeeCCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeeh-hHHHHHHHHHHcCCEEEEEChhhcccccc-CcccCC
Confidence 999998889999999999997 789999999985 789998 89999999999999999998876543322 345689
Q ss_pred CcEEEeCccccccCCCCCCCCeEEEEEEccccc--ccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA--PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 784 aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~--~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
+|+++.++||++ |.+|+|++++++++. +..++.. +......++.++ .....+.+.+.
T Consensus 191 ~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~-------~~~~~~~~t~~~--------~~~~a~~~al~ 249 (381)
T PRK02948 191 IDSLSVSAHKIY------GPKGVGAVYINPQVRWKPVFPGTT-------HEKGFRPGTVNV--------PGIAAFLTAAE 249 (381)
T ss_pred CCEEEecHHhcC------CCCcEEEEEEcCCCCCCCcccCCC-------CCCCcCCCCccH--------HHHHHHHHHHH
Confidence 999999999976 345689999987641 1111100 000001111111 11222233333
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhc-cCCcccc
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPILFR 895 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~ 895 (1016)
.+ .+++.++.++...+.+++.++|++ ++++...
T Consensus 250 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~ 283 (381)
T PRK02948 250 NI-LKNMQEESLRFKELRSYFLEQIQTLPLPIEVE 283 (381)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEe
Confidence 33 245778889999999999999987 4565533
No 173
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.72 E-value=9e-16 Score=178.01 Aligned_cols=278 Identities=16% Similarity=0.178 Sum_probs=184.8
Q ss_pred HHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001769 204 EIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1016)
Q Consensus 204 e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v 283 (1016)
+..+|..+...++++.+++++|.+ +..++.+|+.++.+++.++ . +++|+|++++..|+++...++. .|.++
T Consensus 80 ~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG~~a~~~~~~~l-~--~~gd~vi~~~~~~~~~~~~~~~----~~~~~ 150 (397)
T PRK06939 80 RFICGTQDLHKELEEKLAKFLGTE--DAILYSSCFDANGGLFETL-L--GKEDAIISDALNHASIIDGVRL----CKAKR 150 (397)
T ss_pred ccccCCcHHHHHHHHHHHHHhCCC--cEEEEcChHHHHHHHHHHh-C--CCCCEEEEEhhhhHHHHHHHHh----cCCce
Confidence 356788888888999999999976 3456666677777766655 2 3899999999999999887753 24444
Q ss_pred EEe---Cchhhhc-cC----C--CEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-------
Q 001769 284 VVS---DLKDIDY-KS----G--DVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG------- 345 (1016)
Q Consensus 284 ~~v---d~~~L~~-l~----~--~t~~V~v~~-pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg------- 345 (1016)
+.+ |++++++ +. + ++++|++.. -|.+|.+.|+++|.++|+++|+++++| +..+.+.+...+
T Consensus 151 ~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~ 229 (397)
T PRK06939 151 YRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVD-DSHAVGFVGENGRGTVEHF 229 (397)
T ss_pred EEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCCHHHHc
Confidence 444 5566655 43 3 566666654 367899999999999999999999994 455544432211
Q ss_pred --cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 346 --ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 346 --~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
..++||+++|. |.|++ +..|++++++++++.+-.. ... +.+ +++ +.
T Consensus 230 ~~~~~~~i~~~S~sK~~~g------~r~G~v~~~~~~~~~l~~~---------~~~-~~~-------------~~~--~~ 278 (397)
T PRK06939 230 GVMDRVDIITGTLGKALGG------ASGGYTAGRKEVIDWLRQR---------SRP-YLF-------------SNS--LA 278 (397)
T ss_pred CCCCCCcEEEEECHHHhCc------cCceEEEeCHHHHHHHHHh---------Ccc-ccc-------------cCC--CC
Confidence 12579999997 87742 2348999888877665110 000 000 011 11
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCcee
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNL 499 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~ 499 (1016)
.+...+..+++ .++. + .+++.++..++.+++++.|+++| +++... ....+.+..+. ..++.+.|.++||.+
T Consensus 279 ~~~~~a~~~al--~~~~-~-~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 279 PAIVAASIKVL--ELLE-E-SDELRDRLWENARYFREGMTAAG-FTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHHHH--HHHh-c-CHHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceE
Confidence 12222222332 3332 2 25677888899999999999887 765432 11122233332 678999999999977
Q ss_pred ecc-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 500 RVV-------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 500 ~~~-------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
... ..+.+|++++.+++++|++++++.|.
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~ 388 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFE 388 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 431 13579999999999999999999986
No 174
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=2e-16 Score=179.24 Aligned_cols=242 Identities=16% Similarity=0.198 Sum_probs=177.3
Q ss_pred hHHHHHHHHHHHHHHHhCCC--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH----HHHHhCCc
Q 001769 629 GYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~----~~a~~~G~ 702 (1016)
-+.+++.++.+.+..+++.+ .+.+.+.||+.|.++++..+- .++++||+... |.+. ..++.+|.
T Consensus 35 ~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkVLv~~n--G~FG~R~~~ia~~~g~ 104 (383)
T COG0075 35 DFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKVLVVVN--GKFGERFAEIAERYGA 104 (383)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--ChHHHHHHHHHHHhCC
Confidence 45567889999999999988 345667788777776655432 36788888665 4444 45789999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc
Q 001769 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 703 ~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
+++.+.+.+.-.+|+++++++++++ ++.++|.+++- +++|+.. |+++|+++|++||++++||+...++-. -..+.+
T Consensus 105 ~v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvln-pl~~I~~~~k~~g~l~iVDaVsS~Gg~-~~~vd~ 181 (383)
T COG0075 105 EVVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLN-PLKEIAKAAKEHGALLIVDAVSSLGGE-PLKVDE 181 (383)
T ss_pred ceEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccC-cHHHHHHHHHHcCCEEEEEecccCCCc-ccchhh
Confidence 9999999887789999999999843 56778888875 5789998 999999999999999999987643322 246889
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCC-----ccccCCCCCCCCcCCCCCCccCCccchhhHHHHH
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH-----PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~-----~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a 856 (1016)
||+|+++.+.+|+|+. .||+|++.++++..+.+-.+ .......+...+.... .||..+..+..+
T Consensus 182 wgiDv~itgSQK~l~~-----PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~------~p~Tppv~~i~a 250 (383)
T COG0075 182 WGIDVAITGSQKALGA-----PPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGS------TPYTPPVNLIYA 250 (383)
T ss_pred cCccEEEecCchhccC-----CCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCC------CCCCCCHHHHHH
Confidence 9999999999999974 48999999998765544322 1110000000110011 122222222333
Q ss_pred -HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccc
Q 001769 857 -YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILF 894 (1016)
Q Consensus 857 -~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y 894 (1016)
...++.+-.|||..+.+++..+++++++.+++ ++++.-
T Consensus 251 L~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~ 290 (383)
T COG0075 251 LREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA 290 (383)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 57788888999999999999999999999997 677653
No 175
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.72 E-value=2.2e-15 Score=170.55 Aligned_cols=304 Identities=17% Similarity=0.160 Sum_probs=196.8
Q ss_pred CCCCCCCCChHHHHHHHHh--CCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCC------CccEEEccchHHHHHH
Q 001769 172 GMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP------MSNASLLDEGTAAAEA 243 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~--~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~------~anasl~~~~Taa~eA 243 (1016)
|.|.||...++.+...+.. ++.....|.+ .+|.. ++++.++++++.. ..++.+++++|+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~ 74 (350)
T cd00609 4 SIGEPDFPPPPEVLEALAAAALRAGLLGYYP-----DPGLP----ELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSL 74 (350)
T ss_pred CCCCCCCCCCHHHHHHHHHHhhccCCCCCCC-----CCCcH----HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 5666777766665544442 2222333332 23333 3445555655544 5568888999998888
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch----------hhhc-cCCCEeEEEEEcC-CCCee
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEGE 311 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~----------~L~~-l~~~t~~V~v~~p-n~~G~ 311 (1016)
++.++. +++++|++++..|+++...++. .|++++.++.+ .++. +++++++|++++| |.+|.
T Consensus 75 ~~~~~~---~~g~~vl~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~ 147 (350)
T cd00609 75 LLRALL---NPGDEVLVPDPTYPGYEAAARL----AGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGA 147 (350)
T ss_pred HHHHhC---CCCCEEEEcCCCchhHHHHHHH----CCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCc
Confidence 777663 3689999999999998887653 57777776642 2223 5678999999888 57899
Q ss_pred eccHHHH---HHHHHhCCcEEEEEeccccccC--------CCCCCcccceEEEecC-ccccccCCCCCcceEEEEeeh-h
Q 001769 312 VLDYGDF---IKNAHANGVKVVMATDLLALTI--------LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-E 378 (1016)
Q Consensus 312 i~dl~eI---~~lah~~GalviV~a~~~alg~--------l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~-~ 378 (1016)
+.|++++ .++||++|++++++. .++.+. +......+.|++++|. |.|+ .+|+.+|++++++ +
T Consensus 148 ~~~~~~l~~l~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~~ 222 (350)
T cd00609 148 VLSEEELEELAELAKKHGILIISDE-AYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPEE 222 (350)
T ss_pred ccCHHHHHHHHHHHHhCCeEEEEec-chhhceeCCcccccccCcCccCcEEEEeecccccC----CcccceEEEecCHHH
Confidence 9876555 589999999999942 222211 1224567899999998 7775 2456789999988 6
Q ss_pred hhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 001769 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 458 (1016)
Q Consensus 379 l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~ 458 (1016)
+.+.+.... +....++|. ....++.++ +.. +.++++++.+++.++++++.
T Consensus 223 ~~~~~~~~~------------------------~~~~~~~~~---~~~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~l~ 272 (350)
T cd00609 223 LLERLKKLL------------------------PYTTSGPST---LSQAAAAAA--LDD-GEEHLEELRERYRRRRDALL 272 (350)
T ss_pred HHHHHHHHH------------------------HhcccCCCh---HHHHHHHHH--HhC-cHHHHHHHHHHHHHHHHHHH
Confidence 776652100 000111221 122122111 121 11678999999999999999
Q ss_pred HHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 459 LGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 459 ~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.|++.+...+.....-..+.+..+. ...+.+.|.++||.+... .+..+|++++.. ++|+++++++|.
T Consensus 273 ~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 273 EALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 99999862322121111223344443 556777787889988653 457899999988 999999999985
No 176
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.72 E-value=3.3e-16 Score=176.68 Aligned_cols=173 Identities=21% Similarity=0.340 Sum_probs=143.1
Q ss_pred hhHHHH--HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH---HhCCc
Q 001769 628 QGYQEM--FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGM 702 (1016)
Q Consensus 628 qG~~e~--~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a---~~~G~ 702 (1016)
.|+... +++.++.+++|.|++...+.+++|| ++++.++++.+....+++..++||+...+|.+....+ +-.|+
T Consensus 79 y~w~~~~~~E~aR~~VAklInAd~~dIiFts~A--TEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~ 156 (428)
T KOG1549|consen 79 YGWKAEDAVEAAREQVAKLINADPSDIVFTSGA--TESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGL 156 (428)
T ss_pred cchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCc--hHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCe
Confidence 344443 8899999999999997667777775 4477888887755444322338999999999876654 46799
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc
Q 001769 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 703 ~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
+|+.+|++.+|.+|++.+++.|+ ++|++|.|.+-| ..|++. |++||+++|++.|++||+|+||..+... ....+
T Consensus 157 ~Vt~lpv~~~~~~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~-Pv~EI~~icr~~~v~v~~DaAQavG~i~-vDV~e 231 (428)
T KOG1549|consen 157 EVTYLPVEDSGLVDISKLREAIR---SKTRLVSIMHVNNEIGVLQ-PVKEIVKICREEGVQVHVDAAQAVGKIP-VDVQE 231 (428)
T ss_pred EEEEeccCccccccHHHHHHhcC---CCceEEEEEecccCccccc-cHHHHHHHhCcCCcEEEeehhhhcCCcc-ccHHH
Confidence 99999999889999999999998 899999998875 689998 8999999999999999999999755543 25578
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcc
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~ 813 (1016)
+++|+++.++||+| |.||+|+++++.
T Consensus 232 ln~D~~s~s~HK~y------gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 232 LNADFLSISAHKIY------GPPGIGALYVRR 257 (428)
T ss_pred cCchheeeeccccc------CCCcceEEEEcc
Confidence 99999999999998 567899999996
No 177
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.72 E-value=1e-15 Score=177.68 Aligned_cols=272 Identities=20% Similarity=0.141 Sum_probs=186.9
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
.++++.+|++.|.+. +.++.+|++++.++++++. ++||+||+++..|+.+...+...++..|+++.+++. ++
T Consensus 64 ~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al~---~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~ 138 (386)
T PRK06767 64 KLFEERMAVLEGGEE--ALAFGSGMAAISATLIGFL---KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEAD 138 (386)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh---CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 456789999999864 7788899988877776662 379999999999999988887777778999888765 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ +.++|++|++.+| |.+|.+.|+++|.++||++|++++|+ +.++.+....|-++|+|+++.|. |.|+++ |+
T Consensus 139 l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~pl~~g~Div~~S~sK~l~g~---g~ 214 (386)
T PRK06767 139 IENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVD-NTFCSPYLQRPLELGCDAVVHSATKYIGGH---GD 214 (386)
T ss_pred HHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCcEEEecCcceecCC---CC
Confidence 555 7788999999998 68999999999999999999999994 45565556666788999999998 877532 33
Q ss_pred cceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHH
Q 001769 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1016)
Q Consensus 368 P~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia 447 (1016)
+-+|+++++++++.++-. ..++.-|+. .+++ .|. +...+-+-+....
T Consensus 215 ~~gG~v~~~~~~i~~~~~------------------------~~~~~~g~~----~~~~---~a~--l~~~~L~tl~~r~ 261 (386)
T PRK06767 215 VVAGVTICKTRALAEKIR------------------------PMRKDIGGI----MAPF---DAW--LLLRGLKTLAVRM 261 (386)
T ss_pred ceeEEEEeChHHHHHHHH------------------------HHHHHhCCC----CCHH---HHH--HHHcCCCcHHHHH
Confidence 446899988776544300 001111111 0111 111 2333444555666
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEcC-C----------CCccEEEEecCC----HHHHHHHHHHcCceeec-----------
Q 001769 448 QRVHGLAGTFALGLKKLGTVEVQG-L----------PFFDTVKVKCAD----AHAIASAAYKIEMNLRV----------- 501 (1016)
Q Consensus 448 ~~~~~~a~~L~~~L~~~G~~~l~~-~----------~~~~~v~i~~~~----~~~v~~~L~~~GI~~~~----------- 501 (1016)
++.++++.++++.|+++++++.+. + ..-..|+|.+++ +.++.++|...++.++.
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCC
Confidence 778899999999999985576432 1 111246666643 56777887766553211
Q ss_pred ----------------ccCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 502 ----------------VDSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 502 ----------------~~~~~lris~te~~t~edid~ll~aL 527 (1016)
+.++.||+|++--+.++=+++|.++|
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al 383 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQAL 383 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 12467888888655444445555554
No 178
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.71 E-value=1.3e-15 Score=178.08 Aligned_cols=234 Identities=15% Similarity=0.176 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCC-hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcEE--
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNA-GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKI-- 704 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~s-Ga~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~v-- 704 (1016)
....++++ + +++|++...+..++ ++++. .++++.+. .+++ ++++|+++..+|+++... ++..|+++
T Consensus 71 ~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l---~~~~~~~~-~~~~-~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~ 143 (406)
T TIGR01814 71 TLDESLLK-L-RLVGAKEDEVVVMNTLTINL---HLLLASFY-KPTP-KRYKILLEAKAFPSDHYAIESQLQLHGLTVEE 143 (406)
T ss_pred hhhhhhcc-c-cccCCCCCcEEEeCCchHHH---HHHHHHhc-CCcC-CccEEEecCCCCChHHHHHHHHHHhcCCCccc
Confidence 33444444 4 89998754444444 44333 33444431 1221 234788888888874432 45678887
Q ss_pred --EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc
Q 001769 705 --VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 705 --v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
+.++.+++|.+|++++++.+++..++|++|++++++ .+|.+. |+++|+++||++|++++||++|..+... ....+
T Consensus 144 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~-~~~~i~~~~~~~g~~~~vD~aq~~G~~~-id~~~ 221 (406)
T TIGR01814 144 SMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLF-DMAAITRAAHAKGALVGFDLAHAVGNVP-LDLHD 221 (406)
T ss_pred ceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceec-CHHHHHHHHHHcCCEEEEEcccccCCcc-ccccc
Confidence 567777778899999999886444789999999985 589998 9999999999999999999999766544 24457
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCC-------------CCCCcCCCCCCccCCcc
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGI-------------PAPEKSQPLGTIAAAPW 847 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~-------------~~re~~~~~g~i~s~~~ 847 (1016)
+|+|++++++|||++ |||| |.+++++ .+....|. ..|+.+.. +....+.+|.++
T Consensus 222 ~gvD~~~~s~hK~l~-----g~pG-~~l~v~~~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~----- 289 (406)
T TIGR01814 222 WGVDFACWCTYKYLN-----AGPG-AGAFVHEKHAHTERPR-LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPI----- 289 (406)
T ss_pred CCCCEEEEcCccccC-----CCCC-eEEEEehhhhhhcCCC-CCcccCCCCccccccccccCCCccceeeCCccH-----
Confidence 899999999999995 4577 5455543 33232232 22221110 000001112222
Q ss_pred chhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 848 G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
..++...+.|..+-..|+.++.++...+++|+.+.|++.
T Consensus 290 ---~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 328 (406)
T TIGR01814 290 ---LSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKAR 328 (406)
T ss_pred ---HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 112222334555545578888899999999999999763
No 179
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.71 E-value=3.9e-15 Score=171.92 Aligned_cols=214 Identities=22% Similarity=0.201 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~-- 289 (1016)
...++++.+|+++|.+. +.++++|++++.++++++. +++|+|+++...|..+...++..++..|++++.+|.+
T Consensus 41 ~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~---~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 115 (369)
T cd00614 41 TVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLALL---KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDP 115 (369)
T ss_pred hHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHc---CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCH
Confidence 34567789999999875 7888999999888887763 3799999999999999888776677789999998865
Q ss_pred -hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001769 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1016)
Q Consensus 290 -~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~ 365 (1016)
++++ +++++++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|-++|+|++++|. |.|+++
T Consensus 116 ~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~liv-D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~--- 191 (369)
T cd00614 116 EALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVV-DNTFATPYLQRPLELGADIVVHSATKYIGGH--- 191 (369)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCcchhcCChhhhCCcEEEeccceeccCC---
Confidence 4555 7778999999987 7899999999999999999999999 456777766667789999999998 777532
Q ss_pred CCcceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHH
Q 001769 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1016)
Q Consensus 366 GGP~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~ 444 (1016)
|..-+|++.+++ ++.+++.. .++.-|+ .+ .+. .+ ++...+-+.+.
T Consensus 192 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~g~-~~---~p~---~a--~~~l~~l~tl~ 237 (369)
T cd00614 192 SDVIAGVVVGSGEALIQRLRF-------------------------LRLALGT-IL---SPF---DA--WLLLRGLKTLP 237 (369)
T ss_pred CCceEEEEEeCcHHHHHHHHH-------------------------HHHhhCC-CC---CHH---HH--HHHHcCCCCHH
Confidence 223368888876 66554410 0011111 01 111 11 12334446677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 445 ~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
...++..+++.++++.|++.++++
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 778888999999999999986453
No 180
>PRK15029 arginine decarboxylase; Provisional
Probab=99.71 E-value=8.4e-16 Score=188.09 Aligned_cols=277 Identities=13% Similarity=0.074 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-- 288 (1016)
..|.+.|+..|+++|++.+.. +++|+|.++.+++++.. ++||+|||++++|.|+...+.. .|++.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~t~F-lvNGST~gn~a~i~a~~---~~gd~Vlv~RN~HKSv~~al~L----~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWS-VVVGTSGSNRTIMQACM---TDNDVVVVDRNCHKSIEQGLIL----TGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 468899999999999987544 77899999999998864 3899999999999999998743 4777777643
Q ss_pred ----------------hhhhc-c--CCCEe--------EEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccc-c---
Q 001769 289 ----------------KDIDY-K--SGDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL-A--- 337 (1016)
Q Consensus 289 ----------------~~L~~-l--~~~t~--------~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~-a--- 337 (1016)
+.+++ + .++++ +|++++|||+|.+.|+++|+++||++|++++|+ ++| +
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvD-EAhGah~~ 355 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFD-EAWYGYAR 355 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEE-Cccccccc
Confidence 23433 2 34445 899999999999999999999999999999993 333 1
Q ss_pred -ccCCC--CCC-----c-ccce-EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccc
Q 001769 338 -LTILK--PPG-----E-LGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (1016)
Q Consensus 338 -lg~l~--~pg-----~-~GaD-ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqt 406 (1016)
...+. .+- . .||| +++.|. |.++. +. .+++++++.. .+.+ |
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lT----QaS~LHv~~~-~~~i---------d------------- 407 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LS----QASYIHVREG-RGAI---------N------------- 407 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccc-hh----hhhhheeCCC-cccc---------C-------------
Confidence 11122 111 3 7999 899999 66653 22 3467776543 0011 0
Q ss_pred ccccccccccCCccchhhHHHHHHHHHH-H-HHhCc-ccHHHHHHHHHHHHHHHHHHHhcCCC-----------------
Q 001769 407 REQHIRRDKATSNICTAQALLANMAAMY-A-VYHGP-EGLKTIAQRVHGLAGTFALGLKKLGT----------------- 466 (1016)
Q Consensus 407 reqhiRRekaTsnicT~~~l~a~~Aa~y-~-~~~g~-~Gl~~ia~~~~~~a~~L~~~L~~~G~----------------- 466 (1016)
+.|...+=+-..|+++.+.++|++- + .++.. .| +++.++..+.+..+++.|.++.+
T Consensus 408 ---~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~ 483 (755)
T PRK15029 408 ---FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEV 483 (755)
T ss_pred ---HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCccc
Confidence 0011112223346688999999983 2 23322 34 45667777888889999877642
Q ss_pred -------------------------eEEcCC--C------------CccE--EEEecCC----HH---------HHHHHH
Q 001769 467 -------------------------VEVQGL--P------------FFDT--VKVKCAD----AH---------AIASAA 492 (1016)
Q Consensus 467 -------------------------~~l~~~--~------------~~~~--v~i~~~~----~~---------~v~~~L 492 (1016)
+.++.+ . .+|+ ++|.+++ +. ++.+.|
T Consensus 484 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L 563 (755)
T PRK15029 484 VTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL 563 (755)
T ss_pred cccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHH
Confidence 222211 0 1243 4555432 33 899999
Q ss_pred HHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 493 ~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++||.++..+...+.+-++..+|++++++|+++|.
T Consensus 564 ~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~ 599 (755)
T PRK15029 564 GRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLC 599 (755)
T ss_pred HHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 889999999888999999999999999999999986
No 181
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.70 E-value=6.9e-16 Score=179.26 Aligned_cols=171 Identities=17% Similarity=0.205 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcC--C
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--D 710 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~--d 710 (1016)
.+.++++.+++++|.+.+. +.++|++|+.+++.++ . .++++|+++...|.+....+...|++++.++. +
T Consensus 64 ~~~~l~~~lA~~~g~~~~~-~~~g~t~a~~~al~~l---~-----~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 134 (387)
T PRK09331 64 PIADFHEDLAEFLGMDEAR-VTHGAREGKFAVMHSL---C-----KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGY 134 (387)
T ss_pred HHHHHHHHHHHHhCCCcEE-EeCCHHHHHHHHHHHh---c-----CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccC
Confidence 4678999999999998754 4566666654444333 1 35789999999888776668889999999998 6
Q ss_pred CCCCCCHHHHHHHHHcC----CCCEEEEEEEcCCC-CccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCc
Q 001769 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~----~~~t~~v~i~~Pn~-~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaD 785 (1016)
+++.+|+++++++++++ .+++++|++++|++ +|.+. |+++|+++||++|+++++|+++..+..+ ....++|+|
T Consensus 135 ~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~-~l~~I~~la~~~g~~livD~a~~~g~~~-~~~~~~g~D 212 (387)
T PRK09331 135 PEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA-DAKKVAKVAHEYGIPFLLNGAYTVGRMP-VDGKKLGAD 212 (387)
T ss_pred cCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCcccCCcC-CCHHHcCCC
Confidence 77889999999999742 24789999999974 89998 8999999999999999999988643322 234468999
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
++++++||+++ +++|+|++++++++.+.+
T Consensus 213 ~~~~s~~K~l~-----~~~~~G~l~~~~~~i~~~ 241 (387)
T PRK09331 213 FIVGSGHKSMA-----ASAPSGVLATTEEYADKV 241 (387)
T ss_pred EEEeeCccccc-----CCCCEEEEEECHHHHhhc
Confidence 99999999995 345789999998766544
No 182
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.70 E-value=2e-15 Score=173.91 Aligned_cols=297 Identities=15% Similarity=0.117 Sum_probs=192.5
Q ss_pred ChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCC---
Q 001769 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK--- 256 (1016)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd--- 256 (1016)
.|+.+.+++.+... .|+ +.-+.+.++++.+|+++|.+. +.+++|+|+++.++++++. . +||
T Consensus 25 ~~~~v~~a~~~~~~---~~~--------~~~~~~~~~~~~~a~~~g~~~--~~~~~g~t~al~~al~al~-~--~Gd~~~ 88 (363)
T TIGR01437 25 VSDEVADAQKRGAQ---NYF--------EIKELVNKTGEYIANLLGVED--AVIVSSASAGIAQSVAAVI-T--RGNRYL 88 (363)
T ss_pred CCHHHHHHHHHHHh---cCC--------CHHHHHHHHHHHHHHhhCCCe--EEEEcCHHHHHHHHHHHHh-c--CCCcch
Confidence 66776666665322 232 123567788999999999874 7899999999998888763 2 455
Q ss_pred ------------EEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC------chhhhc-cCCCEeEEE-EEc-CCCCeeeccH
Q 001769 257 ------------TFIIASNCHPQTIDICITRADGFDIKVVVSD------LKDIDY-KSGDVCGVL-VQY-PGTEGEVLDY 315 (1016)
Q Consensus 257 ------------~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd------~~~L~~-l~~~t~~V~-v~~-pn~~G~i~dl 315 (1016)
+||++...++.+...+.......|.++++++ ++++++ ++++|++++ +++ +|++|.+.|+
T Consensus 89 ~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~ 168 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSV 168 (363)
T ss_pred hhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCH
Confidence 7777763333222122222334587888764 466777 888998776 555 4789999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecC
Q 001769 316 GDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 394 (1016)
Q Consensus 316 ~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~ 394 (1016)
++|+++||++|+++++++ ..+.. +....++|+|++++|+ |+|+ ||-.|+++.++++++.+.....|
T Consensus 169 ~~i~~~a~~~gi~vivD~-a~~~~-~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~----- 235 (363)
T TIGR01437 169 EDAAQVAQEHNLPLIVDA-AAEED-LQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKG----- 235 (363)
T ss_pred HHHHHHHHHcCCeEEEEC-CCCCc-hHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCC-----
Confidence 999999999999999943 22321 1223467999999998 6564 45568888888777665321111
Q ss_pred CCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC--C
Q 001769 395 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--L 472 (1016)
Q Consensus 395 ~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~--~ 472 (1016)
..+ ..+.+|.+ +.++.+++ .++...|.+.+.++. +++.+++++|++++|+++.. +
T Consensus 236 -~~~-------------~~~~~~~~------~~gl~aAl--~~~~~~~~~~~~~~~-~~~~~l~~~L~~i~g~~~~~~~~ 292 (363)
T TIGR01437 236 -IGR-------------AMKVGKEN------ILGLTAAL--EQYLSTGKESGAEMV-AKLTPFIEALNTLKGVSASIVQD 292 (363)
T ss_pred -Ccc-------------eeccCHHH------HHHHHHHH--HHHHccCcccHHHHH-HHHHHHHHHHhcCCCeEEEEecC
Confidence 000 01223322 34555554 233234444444444 35668999999985588762 1
Q ss_pred -C--Ccc--EEEEecC--C--HHHHHHHHHHcC--ceeec--ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 473 -P--FFD--TVKVKCA--D--AHAIASAAYKIE--MNLRV--VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 473 -~--~~~--~v~i~~~--~--~~~v~~~L~~~G--I~~~~--~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
. .++ .+.+... + ..++.++|.++| |..+. ...+.+++++.. ++++|++.++++|..
T Consensus 293 ~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 293 EAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIRE 361 (363)
T ss_pred CCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHH
Confidence 1 112 3555542 3 789999999877 66664 346889999886 559999999999863
No 183
>PRK05968 hypothetical protein; Provisional
Probab=99.70 E-value=1.4e-15 Score=176.76 Aligned_cols=273 Identities=18% Similarity=0.135 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++|+.+|+++|.+. +.++.+|++++.++++++ . ++||+||++...|+.+...+...++..|++++++|.+
T Consensus 65 ~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al-~--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 139 (389)
T PRK05968 65 VRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSF-V--EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEE 139 (389)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHH
Confidence 4567899999999976 667889998877766665 2 3799999999999998888776667789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ + ++|++|++++| |..+.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|. |.|++| |
T Consensus 140 ~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD-~a~a~~~~~~p~~~g~Divv~S~tK~l~g~---~ 214 (389)
T PRK05968 140 AVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMID-NSWASPVFQRPITLGVDLVIHSASKYLGGH---S 214 (389)
T ss_pred HHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCcchhccCchhcCCcEEEeeccccccCC---C
Confidence 4555 5 57899999998 67899999999999999999999994 45555555556788999999998 777644 3
Q ss_pred CcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 367 GP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
++.+|+++.++++++++... + +...+ ..+ .+ ..|++ ...+-+.+...
T Consensus 215 ~~~gG~i~~~~~~~~~l~~~--------------------~----~~~~g-~~~---~~---~~A~~--~l~~L~tl~~r 261 (389)
T PRK05968 215 DTVAGVVAGSKEHIARINAE--------------------A----YPYLG-AKL---SP---FEAWL--LLRGLRTLPLR 261 (389)
T ss_pred CeEEEEEEECHHHHHHHHHH--------------------H----HHhCC-CCC---Ch---HHHHH--HHcccCcHHHH
Confidence 44568888888766554100 0 00001 000 11 12222 33444566666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEcC-C--C--------Cc-cEEEEecCC---HHHHHHHHHHcCceee---------c-
Q 001769 447 AQRVHGLAGTFALGLKKLGTVEVQG-L--P--------FF-DTVKVKCAD---AHAIASAAYKIEMNLR---------V- 501 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~l~~-~--~--------~~-~~v~i~~~~---~~~v~~~L~~~GI~~~---------~- 501 (1016)
.++..+++.++++.|+++.+++.+. + + .+ ..|+|.+++ +.++.++|...++-++ +
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 6777888999999999885465432 1 0 11 256777653 6678888876554211 0
Q ss_pred -----------------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 502 -----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 502 -----------------~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.++.||+|++..++++=+++|.++|.
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 114689999999888777788888775
No 184
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.70 E-value=2.9e-15 Score=170.88 Aligned_cols=280 Identities=17% Similarity=0.168 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--- 288 (1016)
...++++.+++++|.+ ++.++.+||.++++++.+++. +++++|+++...|+++...++. .|++++.++.
T Consensus 19 ~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~--~~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGI--GPGDEVIVPSFTFVATANAILL----LGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC--CCCCEEEeCCcchHHHHHHHHH----cCCeEEEEecCCC
Confidence 3557889999999975 477889999988888777643 2789999999999999888753 4777777653
Q ss_pred ------hhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---CCcccceEEEecC--
Q 001769 289 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGSA-- 356 (1016)
Q Consensus 289 ------~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~---pg~~GaDivvgs~-- 356 (1016)
+++++ +++++++|++++ ++|.+.|+++|.++|+++|++++++ ..+++|.... .+.+ .|+.+.|.
T Consensus 91 ~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~i~li~D-~a~~~g~~~~~~~~~~~-~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITPRTKAIIPVH--LYGNPADMDAIMAIAKRHGLPVIED-AAQALGATYKGRKVGTF-GDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCcCCeEEEEEC--CCCCcCCHHHHHHHHHHcCCeEEEE-CCCCCCCeECCEEcccC-cceeEEcCCC
Confidence 34555 677899998876 5799999999999999999999994 3445553321 1222 58877773
Q ss_pred -ccccccCCCCCcceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH
Q 001769 357 -QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 357 -k~lg~P~g~GGP~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
|+|+ +|.+|++.++ +++.+.+....-+ |..... .+.+..+.+. +..+..+.+++
T Consensus 167 ~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~------~~~~~~---------~~~~~~~~~~--~~~~~~~~aa~- 222 (352)
T cd00616 167 TKNLT------TGEGGAVVTNDEELAERARLLRNH------GRDRDR---------FKYEHEILGY--NYRLSEIQAAI- 222 (352)
T ss_pred CCCCc------ccCceEEEECCHHHHHHHHHHHHc------CCCCCC---------Cccccceeee--ccCcCHHHHHH-
Confidence 5552 2233666665 4665544211000 100000 0011111110 01111222222
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-----CccEEEEecC---C--HHHHHHHHHHcCceeeccc-
Q 001769 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCA---D--AHAIASAAYKIEMNLRVVD- 503 (1016)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~-----~~~~v~i~~~---~--~~~v~~~L~~~GI~~~~~~- 503 (1016)
.....++++++.++..++++++++.|+++.|++++..+ ....+.|.++ + ..++.+.|.++||.++...
T Consensus 223 -~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~ 301 (352)
T cd00616 223 -GLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYP 301 (352)
T ss_pred -HHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecC
Confidence 12223567888889999999999999997448876421 1123455443 2 7899999999999653210
Q ss_pred --------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 504 --------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 504 --------------------------~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+.||++++.++|++||++++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 302 PLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 185
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.6e-15 Score=177.17 Aligned_cols=275 Identities=12% Similarity=0.038 Sum_probs=177.4
Q ss_pred HHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc--------------------------cC--CCCEEEEcCCCC--
Q 001769 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ--------------------------KG--KKKTFIIASNCH-- 265 (1016)
Q Consensus 216 ~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~--------------------------~~--~gd~Vlvs~~~H-- 265 (1016)
..+...+|+|++.+|+-.++|. .|+.++.+|+... |+ +||+|+.-+..|
T Consensus 100 ~~~ra~~lf~a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GG 178 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGG 178 (493)
T ss_pred HHHHHHHHhCCCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCC
Confidence 4577889999999888777554 4556666665310 00 168888664433
Q ss_pred ------HHHHHHHHHhhcCCCeEEE--EeCchhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccc
Q 001769 266 ------PQTIDICITRADGFDIKVV--VSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL 336 (1016)
Q Consensus 266 ------ps~~~~l~~~a~~~gi~v~--~vd~~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~ 336 (1016)
+.+.......+..+|++-. .+|++++++ +.+.+..|++...+.+|.+.|+++|.++|+++|++++|+ +.+
T Consensus 179 Hlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD-~AH 257 (493)
T PRK13580 179 HLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVD-MAH 257 (493)
T ss_pred eeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEE-Cch
Confidence 3333332222333454422 256677777 777888888877544466889999999999999999993 466
Q ss_pred cccCCCC-C------CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccc
Q 001769 337 ALTILKP-P------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 408 (1016)
Q Consensus 337 alg~l~~-p------g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtre 408 (1016)
++|++.- . ...++||+++|+ |+|++ |..||+++++++.+++.
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~G------P~GG~I~~~~~l~~~L~------------------------ 307 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRG------PRGGLVLAKKEYADAVD------------------------ 307 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccC------CCeEEEEecHHHHHHHh------------------------
Confidence 6666531 1 123799999998 77743 55589999998877661
Q ss_pred ccccccccCCccchhhHHHHHHHHH-HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecCC--
Q 001769 409 QHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD-- 484 (1016)
Q Consensus 409 qhiRRekaTsnicT~~~l~a~~Aa~-y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~-~~~~~~v~i~~~~-- 484 (1016)
++.+.+.++.....++|+. -+..+...+.++.++++.+|+++|++.|.+.| ++++. ....+.+.|.+.+
T Consensus 308 ------~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~~~ 380 (493)
T PRK13580 308 ------KGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTSFG 380 (493)
T ss_pred ------hCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCCHH
Confidence 0001111111111111111 11222223447789999999999999999998 88763 2223445555543
Q ss_pred -H-HHHHHHHHHcCceeecc----------cCCeEEEEeccC----CCHHHHHHHHHHHhC
Q 001769 485 -A-HAIASAAYKIEMNLRVV----------DSNTVTASFDET----TTLEDVDKLFIVFAG 529 (1016)
Q Consensus 485 -~-~~v~~~L~~~GI~~~~~----------~~~~lris~te~----~t~edid~ll~aL~~ 529 (1016)
+ ..+.+.|.+.||.+... ....||+++++. ++++|++++++.|..
T Consensus 381 ~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~ 441 (493)
T PRK13580 381 LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVK 441 (493)
T ss_pred HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHH
Confidence 3 46778999999987532 146799999994 469999999999963
No 186
>PLN02263 serine decarboxylase
Probab=99.70 E-value=1.5e-14 Score=168.70 Aligned_cols=334 Identities=14% Similarity=0.094 Sum_probs=213.2
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCCCC-hHHHH---HHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCC
Q 001769 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHV-PPVIL---RNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1016)
Q Consensus 151 ~e~~~~l~~la~~n~~~~~~lG~g~y~~~~-p~~i~---~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~ 226 (1016)
.++++.+.+.-..+... |+|- .++.-. +..+. ...+.|.+.-..+.||+- ++.+.-.+.-.++++|+|.
T Consensus 76 ~~~l~~~~~~~~~~~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~----~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 76 ASVLARYRKTLVERTKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGV----HSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHhcccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcch----hHHHHHHHHHHHHHHHhCC
Confidence 45666666665555433 4553 222223 33332 234455554444455531 3344555666899999999
Q ss_pred CCc--cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC
Q 001769 227 PMS--NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS 295 (1016)
Q Consensus 227 ~~a--nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~ 295 (1016)
+.. ...+++|||.++-..+++.|-. .++..+++|+..|.|+.+.++- +|++++.++. ++|++ |.
T Consensus 149 p~~~~~G~vtsGGTEaNL~Al~aARe~-~~~~vvy~S~~aH~Sv~KAa~l----lgi~~~~Vp~d~~g~mD~~aL~~aI~ 223 (470)
T PLN02263 149 EKNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARM----YRMECVKVDTLVSGEIDCADFKAKLL 223 (470)
T ss_pred CCCCCeEEEeCcHHHHHHHHHHHHHhh-cCCcEEEEcCCccHHHHHHHHh----cCCcceEeccCCCCcCcHHHHHHHHH
Confidence 753 4778899996655444433321 1345799999999999998654 5777777664 45665 54
Q ss_pred CC---EeEEEEEcC-CCCeeeccHHHHHHHHHhCCc-----EEEEEecccccc--CCCC-C---CcccceEEEecC-ccc
Q 001769 296 GD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANGV-----KVVMATDLLALT--ILKP-P---GELGADIVVGSA-QRF 359 (1016)
Q Consensus 296 ~~---t~~V~v~~p-n~~G~i~dl~eI~~lah~~Ga-----lviV~a~~~alg--~l~~-p---g~~GaDivvgs~-k~l 359 (1016)
++ ...|+.+.+ +.+|.|+||++|+++|+++|+ +++|++-.-+.. .+.. + +..+||-+..++ |++
T Consensus 224 ~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l 303 (470)
T PLN02263 224 ANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFV 303 (470)
T ss_pred hCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCcccc
Confidence 33 456667776 468999999999999999997 999955322211 1111 1 223489999999 666
Q ss_pred cccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhC
Q 001769 360 GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG 439 (1016)
Q Consensus 360 g~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g 439 (1016)
+.|++ +|++.+|+++.+.+.- + ..|-- .++..+ .++-+ +..++..-+.+..+|
T Consensus 304 ~~P~~-----cgvll~R~~~~~~~~~-------~----~~Yl~---~~d~ti---~gSR~-----g~~al~lW~~L~~~G 356 (470)
T PLN02263 304 GCPMP-----CGVQITRMEHINVLSS-------N----VEYLA---SRDATI---MGSRN-----GHAPIFLWYTLNRKG 356 (470)
T ss_pred CCCcC-----EEEEEEehhhHhhhcc-------C----hHhhC---CCCCCc---CCCCC-----cHHHHHHHHHHHHhC
Confidence 66764 5678888766543311 0 00100 000000 01111 111222222358999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeecccCCeEEEEeccCCCHHH
Q 001769 440 PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLED 519 (1016)
Q Consensus 440 ~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~ed 519 (1016)
.+|++++.+++.++|+++.++|+++| ++++..|...+|+|..+... ...+|+.+... ++.+++++++..+.+.
T Consensus 357 ~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p~s~~V~f~~p~~~-----~~~~gW~L~~~-~~~~Hivvmphv~~~~ 429 (470)
T PLN02263 357 YRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNELSSTVVFERPKDE-----EFVRRWQLACQ-GNIAHVVVMPSVTIEK 429 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCceEEEEecCchH-----HhhcceEEccC-CCcEEEEEcCCCCHHH
Confidence 99999999999999999999999997 77765566667888765321 23579988764 4579999999999999
Q ss_pred HHHHHHHHhCC
Q 001769 520 VDKLFIVFAGG 530 (1016)
Q Consensus 520 id~ll~aL~~~ 530 (1016)
+|+|++.|...
T Consensus 430 id~fi~DL~~~ 440 (470)
T PLN02263 430 LDYFLKELVEK 440 (470)
T ss_pred HHHHHHHHHHH
Confidence 99999999754
No 187
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=3.8e-15 Score=172.08 Aligned_cols=211 Identities=15% Similarity=0.147 Sum_probs=154.1
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
..+++.+|++.|.+. +.++.+|++|+.++++++ . ++||+||+++..|+.+...+....+..|++++.++. ++
T Consensus 53 ~~lE~~lA~l~g~~~--~~~~~sG~~Ai~~al~al-l--~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~ 127 (377)
T TIGR01324 53 FALQDAMCELEGGAG--CYLYPSGLAAVTNSILAF-V--KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGED 127 (377)
T ss_pred HHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-c--CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346789999999874 889999999999888876 3 379999999999988776655445567999998876 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++++| |.+|.+.|+++|+++||++|++++| ++.++.|.+..|.++|+||+++|+ |+++++ |+
T Consensus 128 l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~liv-D~t~a~g~~~~pl~~gaDivv~S~tK~l~G~---~d 203 (377)
T TIGR01324 128 IATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMI-DNTWAAGLLFKPLEHGVDISIQAGTKYLVGH---SD 203 (377)
T ss_pred HHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEE-ECCCccccccCccccCceEEEecCceeccCC---CC
Confidence 766 7889999999998 6899999999999999999999999 457788887788899999999998 877654 22
Q ss_pred cceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHH
Q 001769 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1016)
Q Consensus 368 P~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia 447 (1016)
-.+|+++++++..+++-. .++..|+. . .+ ...|+...|.+-+....
T Consensus 204 ~~gG~v~~~~~~~~~l~~-------------------------~~~~~G~~-l---~p-----~~a~~~~rgl~tl~~R~ 249 (377)
T TIGR01324 204 IMIGTVVANARTWDQLRE-------------------------HSYLMGQM-V---DA-----DDAYTTLRGLRTLGVRL 249 (377)
T ss_pred ceEEEEEeCHHHHHHHHH-------------------------HHHHhCCC-C---CH-----HHHHHHHhhhhhHHHHH
Confidence 235888887765443300 00111110 0 11 11223333334444456
Q ss_pred HHHHHHHHHHHHHHhcCCCe
Q 001769 448 QRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 448 ~~~~~~a~~L~~~L~~~G~~ 467 (1016)
++..++|..+++.|++...+
T Consensus 250 ~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 250 KQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 77778888999999987434
No 188
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.69 E-value=4.6e-15 Score=169.39 Aligned_cols=274 Identities=18% Similarity=0.186 Sum_probs=180.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
.|..+...++++.+++++|.+. ..++.+|+.++.+++.++ . +++|+|++++..|+++...++. .|++++.+
T Consensus 57 ~g~~~~~~~l~~~la~~~~~~~--~i~~~~G~~~~~~~l~~~-~--~~gd~v~~~~~~~~~~~~~~~~----~g~~~~~~ 127 (360)
T TIGR00858 57 SGNSPLHEELEEELAEWKGTEA--ALLFSSGYLANVGVISAL-V--GKGDLILSDALNHASLIDGCRL----SGARVRRY 127 (360)
T ss_pred cCCcHHHHHHHHHHHHHhCCCC--EEEECchHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceEEe
Confidence 3444556678899999999653 455666666666554444 2 3789999999999999887653 46666665
Q ss_pred C---chhhhc-cC----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC----------Ccc
Q 001769 287 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GEL 347 (1016)
Q Consensus 287 d---~~~L~~-l~----~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~p----------g~~ 347 (1016)
+ ++++++ ++ +++++|++..+ |.+|.+.|+++|.++|+++|++++++ +..+.+.+... ...
T Consensus 128 ~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD-DAHGTGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred cCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE-CcccccCcCCCCCchHHhcCCCcc
Confidence 4 456665 43 34677777766 67899999999999999999999994 44444332211 123
Q ss_pred cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHH
Q 001769 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1016)
Q Consensus 348 GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l 426 (1016)
+.||+++|. |.|+. ++ |+++.++++.+.+... ...+. ...+ +++...
T Consensus 207 ~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~----------~~~~~-----------~~~~----~~~~~~ 254 (360)
T TIGR00858 207 PVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINR----------ARTLI-----------FSTA----LPPAVA 254 (360)
T ss_pred CCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHh----------Cccce-----------ecCC----CCHHHH
Confidence 779999987 77753 22 6888887776654100 00000 0001 111222
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeecc-
Q 001769 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (1016)
Q Consensus 427 ~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~- 502 (1016)
.+..+++ .++. .++++.++..++.+++.+.|+++| +++..+. ...+.+..+. +.++.++|.++||.+...
T Consensus 255 ~a~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 255 AAALAAL--ELIQ--EEPWRREKLLALIARLRAGLEALG-FTLMPSC-TPIVPVIIGDNASALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HHHHHHH--HHHh--hCHHHHHHHHHHHHHHHHHHHHcC-CccCCCC-CCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 2333333 2221 235678889999999999999987 7665321 1234455543 678999999999988531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 ------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+|++++.+++++|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 13579999999999999999999873
No 189
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=2.8e-15 Score=174.24 Aligned_cols=273 Identities=16% Similarity=0.131 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|++.|.+. +.++.+|++++.+++..+ ++||+||+++..|+++...+...++..|++++.+|.+
T Consensus 56 ~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~~l----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 129 (390)
T PRK08064 56 REALEDIIAELEGGTK--GFAFASGMAAISTAFLLL----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLE 129 (390)
T ss_pred HHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHHHh----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHH
Confidence 4557789999999874 667888888877655422 2799999999999998888877777789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|| ...+.+....|.++|+||++.|+ |.|++|.+
T Consensus 130 ~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~-- 206 (390)
T PRK08064 130 EVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVD-NTFLTPLLQKPLDLGADVVLHSATKFLAGHSD-- 206 (390)
T ss_pred HHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEE-CCCCcccccCchhhCCcEEEeecceeccCCcc--
Confidence 4555 7788999999998 68999999999999999999999994 34455555556689999999998 76654422
Q ss_pred CcceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
--+|+++++ +++.+.+... +... +++. .+. - .|+...|-+-+..
T Consensus 207 -~laG~~v~~~~~~~~~l~~~-------------------------~~~~---g~~~-~~~---~--a~l~~~gl~tl~~ 251 (390)
T PRK08064 207 -VLAGLAVVKDEELAQKLYFL-------------------------QNSF---GAVL-GVQ---D--CWLVLRGLKTLHV 251 (390)
T ss_pred -ceeEEEEeCCHHHHHHHHHH-------------------------HHhc---CCCC-CHH---H--HHHHHcccCcHHH
Confidence 124777775 3555444110 0000 1110 000 1 1123334444556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE-EcCC-----C-----------CccEEEEecCCHHHHHHHHHHcCce-----ee---
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----LR--- 500 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~-l~~~-----~-----------~~~~v~i~~~~~~~v~~~L~~~GI~-----~~--- 500 (1016)
..++..+++..+.+.|++.+.+. +..+ + +...|+|.+++..++.+.+...++. +.
T Consensus 252 R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 331 (390)
T PRK08064 252 RLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAVE 331 (390)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCCc
Confidence 66777888889999999875332 2211 1 1124677776544455555555552 11
Q ss_pred ---------------c-------ccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 501 ---------------V-------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 501 ---------------~-------~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
. +.++.||+|++..++++.|++|.++|..
T Consensus 332 sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 332 SILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred ceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0 1257899999999999999999999964
No 190
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=1.3e-14 Score=168.01 Aligned_cols=210 Identities=20% Similarity=0.208 Sum_probs=153.2
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~L 291 (1016)
++++.||+|.|.+. +.++.+|++++.++++++ + ++||+||+++..|+.+...+....+.+|+++..++. +++
T Consensus 65 ~Le~~iA~le~~~~--~~~~~sG~~Ai~~~l~al-l--~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 65 AFQAAIVELEGGAG--TALYPSGAAAISNALLSF-L--KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 56789999998764 789999999998888876 3 379999999999988887765555678999998875 446
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCc
Q 001769 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1016)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP 368 (1016)
++ ++++|++|++++| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++||||++.|+ |+++++ |.-
T Consensus 140 ~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvv-D~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh---~d~ 215 (394)
T PRK09028 140 RELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVML-DNTWASPINSRPFEMGVDISIQAATKYIVGH---SDV 215 (394)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEE-ECCccccccCCccccCceEEEEeCCeEecCC---CCE
Confidence 66 7889999999998 7899999999999999999999999 456677777788999999999999 777543 111
Q ss_pred ceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHH
Q 001769 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1016)
Q Consensus 369 ~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~ 448 (1016)
-+|.++.++++.+++-. .++.-|. | ..+. ..|+...|-+-|.-..+
T Consensus 216 ~~G~~~~~~~~~~~l~~-------------------------~~~~~G~---~-~~p~-----~a~l~~rgl~TL~lR~~ 261 (394)
T PRK09028 216 MLGTATANEKHWDQLRE-------------------------HSYLMGQ---C-TSPD-----DVYLAMRGLRTLGVRLA 261 (394)
T ss_pred EEEEEECCHHHHHHHHH-------------------------HHHhcCC---C-CCHH-----HHHHHHcccCcHHHHHH
Confidence 24655555544332200 0011110 0 0111 12345555555666677
Q ss_pred HHHHHHHHHHHHHhcCCCe
Q 001769 449 RVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 449 ~~~~~a~~L~~~L~~~G~~ 467 (1016)
+..++|..+++.|++.+.+
T Consensus 262 ~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 262 QHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHHHHHHHhcCCCc
Confidence 7789999999999988544
No 191
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=5e-15 Score=171.42 Aligned_cols=272 Identities=18% Similarity=0.180 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|+++|.+. +.++.+|++++.+++. + . ++||+||+++..|+++...++..++..|++++++|..
T Consensus 49 ~~~le~~la~l~g~~~--~l~~~sG~~al~~~l~-l-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~ 122 (378)
T TIGR01329 49 RTALESLLAKLDKADR--AFAFSSGMAALDVITR-L-L--NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLD 122 (378)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-H-h--CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 4567899999999854 7788888887665443 2 2 3899999999999999988877777789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|+ |.+++|.+
T Consensus 123 ~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD-~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~-- 199 (378)
T TIGR01329 123 KVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVD-NTMMSPLLCNPLELGADIVYHSATKFLAGHSD-- 199 (378)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCcEEEEecceeccCCcc--
Confidence 4555 7889999999998 68999999999999999999999994 45555655667789999999998 76754321
Q ss_pred CcceEEEEeehh-hhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~~~-l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
.-+|+++++++ +.+++. .+|+..|+ +. .+. .| ++...+.+-+..
T Consensus 200 -~~~G~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~---~a--~l~~~~l~tl~~ 244 (378)
T TIGR01329 200 -VMAGVLAVKGEEIAKKVY-------------------------FLQNSTGS---GL-APF---DC--WLLLRGIKTLAI 244 (378)
T ss_pred -ceeEEEEeCcHHHHHHHH-------------------------HHHHhcCC---cC-CHH---HH--HHHHccCCCHHH
Confidence 22688888653 323331 01111111 00 111 11 334556667777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE-EcC----C-C-----------CccEEEEecCC---HHHHHHHHHHcCceeec----
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE-VQG----L-P-----------FFDTVKVKCAD---AHAIASAAYKIEMNLRV---- 501 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~-l~~----~-~-----------~~~~v~i~~~~---~~~v~~~L~~~GI~~~~---- 501 (1016)
..++...++..+++.|++...++ +.. + | +-..|+|.+.+ +.++.+.|...+|.++.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~ 324 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCC
Confidence 78888899999999999864332 211 1 1 11246777654 56888888655553211
Q ss_pred -----------------------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 502 -----------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 502 -----------------------~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.++.||+|++--+.++=+++|-++|.
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 374 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFV 374 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 124678888876544444455555543
No 192
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.68 E-value=4.6e-15 Score=170.62 Aligned_cols=245 Identities=13% Similarity=0.121 Sum_probs=158.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCce--e-eecCChHHHHHHHHHHHHHHHHhcCCCCCCE-EEEcCCCcccc-HHHHHhCCcE
Q 001769 629 GYQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNV-CIIPVSAHGTN-PATAAMCGMK 703 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~--~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~-Vlv~~saHg~~-~~~a~~~G~~ 703 (1016)
.+.+.++++++.+++++|.+.. . +++.+|++|..+++.++. .++++ |++....|+.. ...++..|++
T Consensus 32 ~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~a~~~g~~ 103 (363)
T TIGR02326 32 DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--------PKDGKLLVVINGAYGARIVQIAEYLGIP 103 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--------CCCCeEEEEeCChhhHHHHHHHHHcCCc
Confidence 3556788999999999999742 3 445666666544443331 13344 55555555553 3446789999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
++.+++++++.+|+++++++++++ ++++.|.+.++ |.+|++. |+++|+++||++|+++++|+++.++... ....++
T Consensus 104 ~~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g~~livD~~~~~g~~~-~~~~~~ 180 (363)
T TIGR02326 104 HHVVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILN-PIEAVAKLAHRHGKVTIVDAMSSFGGIP-IDIAEL 180 (363)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccC-cHHHHHHHHHHcCCEEEEEccccccCcc-cchhhc
Confidence 999999888999999999999742 35666777765 5789998 8999999999999999999887543222 234568
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCC----CCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG----IPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~----~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
++|++++++||+|+ |+||+|++++++++.+.+.....+.... +...+.....-....+ ........+
T Consensus 181 ~~D~~~~s~~K~l~-----~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~----~~~~~al~~ 251 (363)
T TIGR02326 181 HIDYLISSANKCIQ-----GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP----THVVHAFAQ 251 (363)
T ss_pred CccEEEecCccccc-----cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc----HHHHHHHHH
Confidence 99999999999995 4567899999976654432211110000 0000000000000011 111122233
Q ss_pred HHHHhChh-hHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 859 YIAMMGSK-GLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 859 ~l~~lG~e-Gl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
.+..+-.+ |+.++.++...++.++.+.|++ ++++.
T Consensus 252 al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 288 (363)
T TIGR02326 252 ALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPL 288 (363)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 34444334 5888889999999999999987 46654
No 193
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.68 E-value=8.5e-15 Score=170.18 Aligned_cols=214 Identities=23% Similarity=0.247 Sum_probs=156.9
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh---
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~--- 290 (1016)
.++++.+|+++|.+. +.++.+|++++.+++.++ . ++||+|+++...|+.+...++..+...|++++++|+++
T Consensus 62 ~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al-~--~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~ 136 (391)
T TIGR01328 62 SNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTI-L--KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE 136 (391)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 457789999999986 778899998887777665 2 37999999999999888888776778899999998754
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++|+|++++|. |.|++| |+
T Consensus 137 l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~liv-D~a~a~~~~~~~~~~g~Divv~S~sK~lgg~---g~ 212 (391)
T TIGR01328 137 VKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIV-DNTFATPMLTNPVALGVDVVVHSATKYIGGH---GD 212 (391)
T ss_pred HHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEE-ECCCchhccCCchhcCCCEEEccccccccCC---CC
Confidence 444 6788999999998 6899999999999999999999999 456666666667788999999998 777643 33
Q ss_pred cceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHH
Q 001769 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1016)
Q Consensus 368 P~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia 447 (1016)
+.+|+++.++++++++.. .+ ++.... +. ..+. .|+ +...+-+-+....
T Consensus 213 ~~gG~v~~~~~li~~l~~--~~----------------------~~~~~g-~~--l~~~---~a~--l~l~~L~tl~~r~ 260 (391)
T TIGR01328 213 VVAGLICGKAELLQQIRM--VG----------------------IKDMTG-SV--ISPF---DAW--LILRGLKTLNIRM 260 (391)
T ss_pred ceEEEEEcCHHHHHHHHH--HH----------------------HHhCCC-CC--CCcH---HHH--HHHhCcCcHHHHH
Confidence 346888888877655410 00 000000 00 0111 111 2233445556667
Q ss_pred HHHHHHHHHHHHHHhcCCCeE
Q 001769 448 QRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 448 ~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
++..+++.++++.|++.++++
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 777899999999999885454
No 194
>PLN02590 probable tyrosine decarboxylase
Probab=99.68 E-value=1e-14 Score=173.99 Aligned_cols=362 Identities=12% Similarity=0.070 Sum_probs=213.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCc-c--ccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHH
Q 001769 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 215 (1016)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~l~~la~~n~~-~--~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e 215 (1016)
..+| .++.+-.++++++.+....... + ..|.|--.-+...++.+-+.+.+- |-+ ..+.-+.+.+.-+.-.+
T Consensus 101 ~~~P--~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa--~n~--~~~~~~~sPa~t~lE~~ 174 (539)
T PLN02590 101 DSAP--ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAG--LSV--VGFTWLTSPAATELEII 174 (539)
T ss_pred CCCC--CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHh--ccc--ccCCcccCchhHHHHHH
Confidence 3466 5677888999999876544332 1 223333111112344443333221 111 11222345555566666
Q ss_pred HHHHHHHHcCCCC-------ccEEEccchHHHHHHHHHHhccc--c--C----CCCEEEEcCCCCHHHHHHHHHhhcCCC
Q 001769 216 FQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ--K--G----KKKTFIIASNCHPQTIDICITRADGFD 280 (1016)
Q Consensus 216 ~q~~iA~L~G~~~-------anasl~~~~Taa~eA~~~a~~~~--~--~----~gd~Vlvs~~~Hps~~~~l~~~a~~~g 280 (1016)
.-.++++|+|++. ....+++|||.++-..+++.|.. + + ++-.|++++..|.|+.+.++.+ +.|
T Consensus 175 vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il--Glg 252 (539)
T PLN02590 175 VLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG--GIH 252 (539)
T ss_pred HHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc--CCC
Confidence 7789999999986 34667888886665444333321 0 0 2236778999999999887643 222
Q ss_pred e-EEEEeCc----------hhhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC
Q 001769 281 I-KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 341 (1016)
Q Consensus 281 i-~v~~vd~----------~~L~~-l~~------~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l 341 (1016)
- .++.++. ++|++ |.. ...+|+.+.. +.+|.|+||++|+++|+++|++++|++-.-+..++
T Consensus 253 ~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~ 332 (539)
T PLN02590 253 EENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACI 332 (539)
T ss_pred cccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhc
Confidence 1 2444333 34554 432 2456777776 46899999999999999999999995422121122
Q ss_pred CCC------CcccceEEEecC-ccccccCCCCCcceEEEEeehh--hhhcC--CCceEeeeecCCC-Cccee-eeccccc
Q 001769 342 KPP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSG-KPALR-VAMQTRE 408 (1016)
Q Consensus 342 ~~p------g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~--l~~~l--pgrivG~s~d~~g-~~~~~-l~lqtre 408 (1016)
.+. |--.||-+..+. |+++.|+. +|++.+|++ +.+.+ .+..+....+..+ ...|. +.+
T Consensus 333 ~~~~r~~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i---- 403 (539)
T PLN02590 333 CPEYRKFIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQI---- 403 (539)
T ss_pred ChhhHHHhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCC----
Confidence 111 112479999999 77777864 567888763 22222 1111110000000 00000 111
Q ss_pred ccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC----
Q 001769 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---- 484 (1016)
Q Consensus 409 qhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---- 484 (1016)
+--||. . ++..-+-+.++|.+|++++.++..++|+||.+.|++.++|+++.++.+..|.|+...
T Consensus 404 ~lsRr~---------r---aLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~ 471 (539)
T PLN02590 404 SLSRRF---------R---SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGD 471 (539)
T ss_pred CCCCch---------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCC
Confidence 111232 1 121122258899999999999999999999999999866999987778888887531
Q ss_pred -------HHHHHHHHHHcCce-eecc---cCCeEEEEec-cCCCHHHHHHHHHHHhC
Q 001769 485 -------AHAIASAAYKIEMN-LRVV---DSNTVTASFD-ETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 485 -------~~~v~~~L~~~GI~-~~~~---~~~~lris~t-e~~t~edid~ll~aL~~ 529 (1016)
..++.++|.+.|.. +... ..-.+|+|+. +.++++||+.+++.|..
T Consensus 472 ~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~ 528 (539)
T PLN02590 472 EDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQK 528 (539)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 24566666666763 3321 2346899985 46789999999999864
No 195
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.68 E-value=5.4e-16 Score=173.45 Aligned_cols=224 Identities=18% Similarity=0.171 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
.+.++++.+++++|.+.+.+.++++++|..++++++. +++++|+++...|.++...+.+.|.++++++++.+
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 4678999999999998766667777667655555432 36789999999998887778889999999987543
Q ss_pred ------CCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccc--cCc--CCCCcc
Q 001769 713 ------GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGL--TSPGYI 782 (1016)
Q Consensus 713 ------g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~--~~l--~~pg~~ 782 (1016)
+.+|+++++++++++ +++++|++++||++|.+. |+++|+++||++|++++||+|+...+ .+. .....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p~~~G~~~-dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEH-PDAKAAVITNPTYYGICY-NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhC-CCceEEEEECCCCCCEec-CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 479999999999732 578999999999999998 99999999999999999999874211 111 122357
Q ss_pred CCcEEEeCccccccCCCCCCCC-eEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGP-g~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
|+|+++.|+||+++ |+ ++|++.+++..... ..+... +. .. .++ +..+-....+..+..++.
T Consensus 210 ~~div~~S~hK~l~------g~~~~~~l~~~~~~~~~--~~~~~~---~~---~~-~tt---sps~~~~asl~~a~~~~~ 271 (294)
T cd00615 210 GADIVVQSTHKTLP------ALTQGSMIHVKGDLVNP--DRVNEA---LN---LH-QST---SPSYLILASLDVARAMMA 271 (294)
T ss_pred CCcEEEEchhcccc------hHhHHHHHHhCCCcCCH--HHHHHH---HH---HH-CCC---CcHHHHHHHHHHHHHHHH
Confidence 89999999999983 33 45666666542210 000000 00 00 011 111111122233344443
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.+| ++..++.++++++++++|.+
T Consensus 272 ---~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 272 ---LEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred ---HHh-HHHHHHHHHHHHHHHHHHhC
Confidence 344 33567889999999998853
No 196
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.67 E-value=7.7e-15 Score=169.84 Aligned_cols=277 Identities=17% Similarity=0.183 Sum_probs=182.1
Q ss_pred HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 205 ~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
..+|..+...++++.+++++|.+. ..++.+|+.++++++.++ . +++|.|++++..|+++...++. .|++++
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~--~i~~~sG~~a~~~a~~~~-~--~~gd~vi~~~~~~~~~~~~~~~----~g~~~~ 142 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEA--ALVFQSGFNTNQGVLSAL-L--RKGDIVLSDELNHASIIDGLRL----TKATKK 142 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceE
Confidence 456778888899999999999763 456666777766555554 2 3789999999999999877653 344544
Q ss_pred E---eCchhhhc-cC----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---------CCc
Q 001769 285 V---SDLKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---------PGE 346 (1016)
Q Consensus 285 ~---vd~~~L~~-l~----~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~---------pg~ 346 (1016)
. +|++++++ +. +++++|++..+ |.+|.+.|+++|.++||++|+++++| +..+.+.+.. .-.
T Consensus 143 ~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 143 IYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVD-DAHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCccHhhcCCC
Confidence 3 45566655 32 36777776654 78899999999999999999999994 4444443321 112
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhH
Q 001769 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1016)
Q Consensus 347 ~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~ 425 (1016)
.+.||++++. |.|+.+ + |+++.++++++.+... ..+ | .-++. ..+..
T Consensus 222 ~~~~i~~~s~sK~~~~~------g-G~~~~~~~~~~~~~~~---------~~~-~-------------~~~~~--~~~~~ 269 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGVV------G-GYAAGHKELIEYLKNR---------ARP-F-------------LFSTA--QPPAV 269 (385)
T ss_pred cCCcEEEEeccHHhhcC------C-CEEecCHHHHHHHHHh---------Ccc-c-------------cccCC--CCHHH
Confidence 5688988997 887532 2 6888777776654100 000 0 00110 01112
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeecc
Q 001769 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1016)
Q Consensus 426 l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~ 502 (1016)
..+..+++ ..+... .++.++..++.+++.+.|+++| +++..+. .+.+.+..+. ..++.+.|.++||.++..
T Consensus 270 ~~a~~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 270 VAALAAAV--DELQRS--PELMERLWDNTRFFKAGLGKLG-YDTGGSE-TPITPVVIGDEKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEECCHHHHHHHHHHHHHCCcEEccc
Confidence 22333333 222111 2466777888999999999887 7765321 1123333332 568999999999987531
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 -------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+.||++++..++++|+++++++|..
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 126799999999999999999999963
No 197
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.67 E-value=7.9e-15 Score=169.37 Aligned_cols=176 Identities=16% Similarity=0.205 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEc
Q 001769 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~ 708 (1016)
|....+.++++.+++++|++.+.+ .++|.+++.+++.++. +++++|+++...|.+....+++.|.+++.++
T Consensus 48 ~~~~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~ 118 (370)
T TIGR02539 48 ITKPPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSYVAAERAGLNVKEVP 118 (370)
T ss_pred ccchHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHHHHHHHcCCEEEEEe
Confidence 333455678888999999997655 5777766655444432 2568899988888776666789999999999
Q ss_pred CCC--CCCCCHHHHHHHHHcC----CCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc
Q 001769 709 TDA--KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 709 ~d~--~g~iD~~~L~~~i~~~----~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
.+. ++.+|+++|++++++. .+++++|++++|+ .+|.+. |+++|+++||++|+++++|.++..+..+ .....
T Consensus 119 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~-~l~~i~~la~~~~~~livDea~~~g~~~-~~~~~ 196 (370)
T TIGR02539 119 HTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP-DAGKVAKVCREKGVPLLLNCAYTVGRMP-VSAKE 196 (370)
T ss_pred cCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc-CHHHHHHHHHHcCCeEEEECccccCCcC-CCHHH
Confidence 863 4789999999999631 1368899999995 689987 9999999999999999999998654211 12335
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCC
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP 820 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lp 820 (1016)
+++|+++.++||+|+. || ++|++++++++.+.+.
T Consensus 197 ~~~di~v~s~sK~~~~----~g-~~G~l~~~~~~i~~l~ 230 (370)
T TIGR02539 197 IGADFIVGSGHKSMAA----SG-PCGVLGMSEEWEDIVL 230 (370)
T ss_pred cCCCEEEeeCcccccC----CC-CEEEEEECHHHHhhhc
Confidence 7899999999999962 22 3899999987776653
No 198
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.67 E-value=2.4e-14 Score=163.36 Aligned_cols=298 Identities=16% Similarity=0.136 Sum_probs=197.9
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
+.|.++...|+.+.+++.+.....+.|.+- ++ .++++.+|+++|++..++.+.+|+|.++..+++++.
T Consensus 25 ~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----~~-----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-- 92 (346)
T TIGR01141 25 NSNENPFGPPPKAKEALRAEADKLHRYPDP-----DP-----AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-- 92 (346)
T ss_pred cCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----CH-----HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc--
Confidence 556667777777766666533223344321 12 368899999999988889999999988877766653
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~l 321 (1016)
+++++|++++..|+.....+ +..|++++.++. +++++ +++++++|++++| |.+|.+.|++++.++
T Consensus 93 -~~gd~v~~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 93 -EPGDAVLVPPPTYSMYEISA----KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred -CCCCEEEEcCCCHHHHHHHH----HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 27899999998887655443 346888887654 33444 5678999999988 689999999999999
Q ss_pred HHhC--CcEEEEEecccc-ccCCCCC----CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeec
Q 001769 322 AHAN--GVKVVMATDLLA-LTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1016)
Q Consensus 322 ah~~--GalviV~a~~~a-lg~l~~p----g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d 393 (1016)
++.+ |++++++ +..+ +.....+ ...+-+|+++|. |.||.| |..+|++++++++++++....
T Consensus 168 ~~~~~~~~~ii~D-~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G~r~G~~~~~~~~~~~~~~~~------ 236 (346)
T TIGR01141 168 LERTPEDALVVVD-EAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLA----GLRIGYAIANAEIIDALNKVR------ 236 (346)
T ss_pred HHhCCCCcEEEEE-CchhhhcCCccHHHHHhhCCCEEEEehhhHhhhch----hhhceeeecCHHHHHHHHhcc------
Confidence 9887 9999884 3322 2111011 112335677776 877533 456799999888777662100
Q ss_pred CCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC
Q 001769 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (1016)
Q Consensus 394 ~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~ 473 (1016)
.+.+.+ .....+. ..++.. ...++++.++..++.+++++.|+++.|+++....
T Consensus 237 ----------------------~~~~~~-~~~~~~~--~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 289 (346)
T TIGR01141 237 ----------------------APFNLS-RLAQAAA--IAALRD--DDFIEKTVEEINAERERLYDGLKKLPGLEVYPSD 289 (346)
T ss_pred ----------------------CCCCCC-HHHHHHH--HHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCc
Confidence 001111 1111111 111111 1247788888999999999999988338765421
Q ss_pred CccEEEEecC-CHHHHHHHHHHcCceeeccc-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 474 FFDTVKVKCA-DAHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 474 ~~~~v~i~~~-~~~~v~~~L~~~GI~~~~~~-----~~~lris~te~~t~edid~ll~aL~ 528 (1016)
. .-+.+..+ .+.++.++|.++||.+.... ++.+|+|++ +++|+++++++|.
T Consensus 290 g-~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 A-NFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred C-CEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 1 12445555 37889999999999886532 578999976 8999999998873
No 199
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.66 E-value=6.5e-15 Score=167.07 Aligned_cols=271 Identities=17% Similarity=0.098 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---- 288 (1016)
..++++.+++++| ..++.++.+||.++..++.++. +++++|++++..|+++...+. .+...|++++.++.
T Consensus 34 ~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~---~~gd~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 34 TAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT---QPGGSVICHETAHIYTDEAGA-PEFLSGVKLLPVPGENGK 107 (338)
T ss_pred HHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc---CCCCeEEEecCcceeeecCCc-HHHHcCceEEeecCCCCc
Confidence 5566789999999 3457788889877666555542 378999999999987654321 12235778777654
Q ss_pred ---hhhhc-cCC-------CEeEEEEEcCCCCeee---ccHHHHHHHHHhCCcEEEEEecccc------ccCCCCCCccc
Q 001769 289 ---KDIDY-KSG-------DVCGVLVQYPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLA------LTILKPPGELG 348 (1016)
Q Consensus 289 ---~~L~~-l~~-------~t~~V~v~~pn~~G~i---~dl~eI~~lah~~GalviV~a~~~a------lg~l~~pg~~G 348 (1016)
+++++ +.+ ++++|++.+||..|.+ .|+++|+++||++|++++||. ++. .+........+
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDe-a~~~~~~~~~~~~~~~~~~~ 186 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDG-ARLANAAAALGVALKTYKSG 186 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeech-HHHHHHHHhcCCCHHHHHhc
Confidence 34555 543 6889999999766754 578899999999999999942 211 11100011247
Q ss_pred ceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHH
Q 001769 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1016)
Q Consensus 349 aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~ 427 (1016)
+|+++.+. |+|+.| +.++++.++++++++.... .+ ..++.+. .++.
T Consensus 187 ~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~--------------------~~----~~~~~~~---~~~~ 233 (338)
T cd06502 187 VDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRR--------------------KQ----AGGGMRQ---SGFL 233 (338)
T ss_pred CCEEEEeccccCCCc------cceEEECCHHHHHHHHHHH--------------------HH----hCCChhh---HHHH
Confidence 89999888 777654 3356777877776652100 00 0011111 1221
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC----HHHHHHHHH---HcCceee
Q 001769 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY---KIEMNLR 500 (1016)
Q Consensus 428 a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~----~~~v~~~L~---~~GI~~~ 500 (1016)
+ .++ +..+...+..+..++..++++++.+.|+++| +.+.+ +..+.+.+..+. ..++.+.|. ++|+.++
T Consensus 234 ~-~a~--~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~ 308 (338)
T cd06502 234 A-AAG--LAALENDLWLRRLRHDHEMARRLAEALEELG-GLESE-VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFY 308 (338)
T ss_pred H-HHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEE
Confidence 1 112 1233344566777889999999999999987 54432 233344555442 334444443 6799887
Q ss_pred cccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 501 VVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 501 ~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
....+.||++++..+|++|++++++++.
T Consensus 309 ~~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 309 AWGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred ecCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 6655889999999999999999999985
No 200
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.66 E-value=1.4e-14 Score=168.93 Aligned_cols=274 Identities=17% Similarity=0.165 Sum_probs=184.3
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~ 290 (1016)
.++++.+|++.|.+. +.++.+|++++.++++++. ++||+||++...|+.+...+...++..|++++.+|.. +
T Consensus 67 ~~Le~~iA~~~g~~~--~l~~~sG~~Ai~~al~~ll---~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 141 (400)
T PRK06234 67 TEVENKLALLEGGEA--AVVAASGMGAISSSLWSAL---KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE 141 (400)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHh---CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 357789999999864 7889999988877776652 3799999999999998888776667789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~--GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~ 365 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++ |++++|+ +.++.+....|.++|+||+++|. |.|+++
T Consensus 142 l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD-ea~~~~~~~~~l~~g~Divv~S~sK~l~g~--- 217 (400)
T PRK06234 142 VRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD-NTFCTPYIQRPLQLGADVVVHSATKYLNGH--- 217 (400)
T ss_pred HHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE-CCCCchhcCCchhhCCcEEEeeccccccCC---
Confidence 555 7788999999998 6899999999999999997 8999984 55666655667778999999998 777532
Q ss_pred CCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 366 GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
|...+|++++++++.+.+. ..+ . +..-+ . +..++ .+ ++...|-+-+..
T Consensus 218 g~~~gG~v~~~~~~~~~l~--~~~---------------------~-~~~~g-~--~l~p~---~a--~l~~~~l~tl~~ 265 (400)
T PRK06234 218 GDVIAGFVVGKEEFINQVK--LFG---------------------I-KDMTG-S--VIGPF---EA--FLIIRGMKTLQI 265 (400)
T ss_pred CCceeEEEEecHHHHHHHH--HHH---------------------H-HHhcC-C--CCCHH---HH--HHHHhccCcHHH
Confidence 2223589999887766541 000 0 00000 0 00111 11 123344455556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE-EcCC-----C-----------CccEEEEecCC----HHHHHHHHHHcCc--eee--
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEM--NLR-- 500 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~-l~~~-----~-----------~~~~v~i~~~~----~~~v~~~L~~~GI--~~~-- 500 (1016)
..++..+++.++++.|++.+.+. +..+ + +..-|+|.+++ +.++.+.|.-.++ .+.
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~ 345 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDA 345 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCC
Confidence 77778899999999999875343 2211 1 11246676653 4455555554333 110
Q ss_pred ------c-----------------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 501 ------V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 501 ------~-----------------~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+ +.++.||+|++--+.++-|++|.++|.
T Consensus 346 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 396 (400)
T PRK06234 346 ETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALD 396 (400)
T ss_pred CceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 124678999887655555556655553
No 201
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.66 E-value=5.4e-15 Score=170.00 Aligned_cols=170 Identities=18% Similarity=0.241 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g 713 (1016)
..++++.+++++|++.+ +..++|++|...++ +.+. .++++|+++...|.+....+...|++++.++.+.++
T Consensus 46 ~~~l~~~la~~~g~~~i-~~~~g~t~al~~~l---~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLGMDEA-RVTPGAREGKFAVM---HSLC-----EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcCCceE-EEeCCHHHHHHHHH---HHhc-----CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 45888999999999543 44555555554433 3321 357899999888877766688899999999998765
Q ss_pred --CCCHHHHHHHHHcCC----CCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCcE
Q 001769 714 --NINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1016)
Q Consensus 714 --~iD~~~L~~~i~~~~----~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaDi 786 (1016)
.+|+++++++++++. +++++|++++|+ .+|.+. |+++|+++||++|+++++|+|+..+... ..+.++|+|+
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~-~~~~~~~~d~ 194 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH-DAKKIAKVCHEYGVPLLLNGAYTVGRMP-VSGKELGADF 194 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec-cHHHHHHHHHHcCCeEEEECCcccCCcC-CCHHHcCCCE
Confidence 899999999996321 378999999996 489987 9999999999999999999987533211 2345678999
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
++.|+||+|+. ++++|++++++++.+.+
T Consensus 195 ~~~s~~K~l~~-----~~~~G~l~~~~~~~~~l 222 (361)
T cd06452 195 IVGSGHKSMAA-----SAPIGVLATTEEWADIV 222 (361)
T ss_pred EEecCCccccC-----CCCeEEEEECHHHHHHH
Confidence 99999999952 34688999987765543
No 202
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.66 E-value=1.8e-14 Score=167.48 Aligned_cols=213 Identities=21% Similarity=0.199 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
+.++++.+|+++|.+. +.++.+|++++.++++++. ++||+||+++..|+++...+...++..|++++.+|.+
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al~---~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 137 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMALL---QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLD 137 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh---CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 4568899999999875 7888999998888777662 2799999999999998888776666789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|. |.++++ |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD-~t~~~~~~~~pl~~g~Divv~S~sK~~~g~---g 213 (390)
T PRK08133 138 AWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD-NCFCTPALQQPLKLGADVVIHSATKYLDGQ---G 213 (390)
T ss_pred HHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEeecceeecCC---c
Confidence 4555 7889999999988 68999999999999999999999994 45555666667788999999998 777532 1
Q ss_pred CcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 367 GP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
-.-+|++..++++++++- ..++..|. +...+ . .++...|.+-+...
T Consensus 214 ~~~GG~vv~~~~~~~~~~-------------------------~~~~~~g~----~~~~~---~--a~~~l~gl~tl~~R 259 (390)
T PRK08133 214 RVLGGAVVGSKELMEEVF-------------------------GFLRTAGP----TLSPF---N--AWVFLKGLETLSLR 259 (390)
T ss_pred ceEeEEEEcCHHHHHHHH-------------------------HHHHHhCC----CCCHH---H--HHHHHcccchHHHH
Confidence 122367777666543330 00111110 01111 1 12233455557767
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++.++++.|++..+++
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7777899999999999885464
No 203
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.66 E-value=2.4e-14 Score=165.07 Aligned_cols=271 Identities=19% Similarity=0.127 Sum_probs=183.1
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhh-
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID- 292 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~- 292 (1016)
.++++.+|++.+ .++.++.+|++++.+++.++ . ++||+||++...|..+...++..++..|++++.++.++..
T Consensus 54 ~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~al-l--~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~ 127 (366)
T PRK07582 54 RALEAALGELEG---AEALVFPSGMAAITAVLRAL-L--RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE 127 (366)
T ss_pred HHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHh-c--CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH
Confidence 456789999993 34778899998887777665 3 3799999999988887776654455689999999875432
Q ss_pred ccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCcce
Q 001769 293 YKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHA 370 (1016)
Q Consensus 293 ~l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~ 370 (1016)
.+.+++++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+||+++|+ |++++|- |--+
T Consensus 128 ~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD-~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~---g~~~ 203 (366)
T PRK07582 128 AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVD-NTTATPLGQRPLELGADLVVASDTKALTGHS---DLLL 203 (366)
T ss_pred HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEE-CCCCCccccCchhcCCcEEEecccccccCCC---CeeE
Confidence 24468999999998 57899999999999999999999994 33332333456679999999998 7665431 2225
Q ss_pred EEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHH
Q 001769 371 AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (1016)
Q Consensus 371 Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~ 449 (1016)
|+++++ +++.+.+.. .|+..+. +..++ . .|+...|-+-+....++
T Consensus 204 G~v~~~~~~l~~~l~~-------------------------~~~~~g~----~~~~~---~--a~l~~r~l~tl~~R~~~ 249 (366)
T PRK07582 204 GYVAGRDPELMAAVER-------------------------WRLLAGA----IPGPF---E--AWLAHRSLGTLGLRFAR 249 (366)
T ss_pred EEEEcCcHHHHHHHHH-------------------------HHHHhCC----CCCHH---H--HHHHHhccccHHHHHHH
Confidence 888875 455444310 0111010 00111 1 12334444455666677
Q ss_pred HHHHHHHHHHHHhcCCCeEEcC------CC-----------CccEEEEecCCHHHHHHHHHHcCceee--------c---
Q 001769 450 VHGLAGTFALGLKKLGTVEVQG------LP-----------FFDTVKVKCADAHAIASAAYKIEMNLR--------V--- 501 (1016)
Q Consensus 450 ~~~~a~~L~~~L~~~G~~~l~~------~~-----------~~~~v~i~~~~~~~v~~~L~~~GI~~~--------~--- 501 (1016)
..+++..+++.|++...++-+. .| +-..|+|.+++..++.+.|...++... .
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchhh
Confidence 8899999999999875453221 12 122467776565566666666666431 1
Q ss_pred --------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 502 --------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 502 --------~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.++.||+|++..+.++.|++|.++|.
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 124679999999999999999999885
No 204
>PLN02880 tyrosine decarboxylase
Probab=99.66 E-value=2.9e-14 Score=169.85 Aligned_cols=357 Identities=13% Similarity=0.057 Sum_probs=210.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcCCCc-c--ccccCCCCCCCCChHHHHHHHH---hCCCcccccCCChhHHhhhHHHHH
Q 001769 140 KFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIM---ENPAWYTQYTPYQAEIAQGRLESL 213 (1016)
Q Consensus 140 ~lp~~~~~~sE~e~~~~l~~la~~n~~-~--~~~lG~g~y~~~~p~~i~~~i~---~~~~~~t~ytPyq~e~sqG~le~i 213 (1016)
.+| +++.+-.++++++.+.-..+.. + ..|.|--.-+...++.+.+.+. .+..+. | +.+.+..+.-
T Consensus 54 ~~p--~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~-----~--~~sp~~~~lE 124 (490)
T PLN02880 54 SAP--NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFS-----W--ITSPAATELE 124 (490)
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCcc-----c--ccCcccHHHH
Confidence 455 4667888999999875444322 1 2343332222223444433222 222211 1 1334445566
Q ss_pred HHHHHHHHHHcCCCCc-------cEEEccchHHHHHH-HHHHhccc-c-----C-CCCEEEEcCCCCHHHHHHHHHhhcC
Q 001769 214 LNFQTMIADLTGLPMS-------NASLLDEGTAAAEA-MAMCNNIQ-K-----G-KKKTFIIASNCHPQTIDICITRADG 278 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~a-------nasl~~~~Taa~eA-~~~a~~~~-~-----~-~gd~Vlvs~~~Hps~~~~l~~~a~~ 278 (1016)
.+.-.++++|+|++.. ...+++|||.++-. +..|+... + + ++-.|++++..|.|+.+.++-+ +
T Consensus 125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l--G 202 (490)
T PLN02880 125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA--G 202 (490)
T ss_pred HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc--C
Confidence 6677899999999864 35677888876544 33343211 0 0 2235778999999999987643 2
Q ss_pred CCe-EEEEeC----------chhhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecccccc
Q 001769 279 FDI-KVVVSD----------LKDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT 339 (1016)
Q Consensus 279 ~gi-~v~~vd----------~~~L~~-l~~------~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg 339 (1016)
.|- .++.|+ +++|++ |.+ ...+|+.+.. +.+|.++|+++|+++|+++|++++|++ +++.+
T Consensus 203 lg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDa-A~gg~ 281 (490)
T PLN02880 203 IHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDA-AYAGS 281 (490)
T ss_pred CCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEeh-hhHHH
Confidence 231 133332 234554 422 2466777776 468999999999999999999999953 23333
Q ss_pred CCCC-------CCcccceEEEecC-ccccccCCCCCcceEEEEeehh--hhhcCC---CceEeeeecCCCCcce-eeecc
Q 001769 340 ILKP-------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP---GRIVGVSIDSSGKPAL-RVAMQ 405 (1016)
Q Consensus 340 ~l~~-------pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~--l~~~lp---grivG~s~d~~g~~~~-~l~lq 405 (1016)
.+.. .+-.+||.++.+. |+++.|.+ +|++++++. +.+.+. +.+.....+..+...+ .+.+
T Consensus 282 ~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i- 355 (490)
T PLN02880 282 ACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI- 355 (490)
T ss_pred HHhCHHHHHHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc-
Confidence 2222 2224799999999 66776754 678998852 222221 0000000000000000 0111
Q ss_pred cccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-
Q 001769 406 TREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD- 484 (1016)
Q Consensus 406 treqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~- 484 (1016)
+--||. . ++..-+-+..+|.+|++++.++..++++++.+.|++..+++++.++.++.+.|+.+.
T Consensus 356 ---~~~rr~---------~---alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~ 420 (490)
T PLN02880 356 ---PLGRRF---------R---SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPP 420 (490)
T ss_pred ---CCCCcc---------c---HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCC
Confidence 111221 1 111111146899999999999999999999999998845999987777777776531
Q ss_pred ----------HHHHHHHHHHcCc-eeecc---cCCeEEEEeccCCC-HHHHHHHHHHHhC
Q 001769 485 ----------AHAIASAAYKIEM-NLRVV---DSNTVTASFDETTT-LEDVDKLFIVFAG 529 (1016)
Q Consensus 485 ----------~~~v~~~L~~~GI-~~~~~---~~~~lris~te~~t-~edid~ll~aL~~ 529 (1016)
..++.++|.+.|. ++... ....+|+|++..+| .+|++.+++.+..
T Consensus 421 ~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 421 KNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred CCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 1345666665554 44332 24679999987655 6999999999864
No 205
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.66 E-value=1.1e-14 Score=169.67 Aligned_cols=244 Identities=21% Similarity=0.209 Sum_probs=156.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH-----HHhCCcE
Q 001769 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMK 703 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~-----a~~~G~~ 703 (1016)
+..++....++++++++|.+...+.+++|++|..+++.++. +++++|++++..|+.+... ++..|.+
T Consensus 62 ~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~ 133 (402)
T cd00378 62 YVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKL 133 (402)
T ss_pred HHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhc--------CCCCEEEEecCccCcccccccccccccccee
Confidence 33333333667889999998766777778776654444432 3578999998888765433 5567887
Q ss_pred EEEEcCCC---CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccC---cC
Q 001769 704 IVSVGTDA---KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LT 777 (1016)
Q Consensus 704 vv~v~~d~---~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~---l~ 777 (1016)
++.++++. ++.+|++++++++.+ +++++|++++|++ |... |+++|+++||++|+++++|+++..++.. ..
T Consensus 134 ~~~~~~~~~~~~~~id~~~l~~~i~~--~~~~~v~~~~~~~-~~~~-~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~ 209 (402)
T cd00378 134 FESVPYGVDPETGLIDYDALEKMALE--FKPKLIVAGASAY-PRPI-DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFP 209 (402)
T ss_pred EEEecCCcCcccCCcCHHHHHHHHHh--CCCCEEEecCccc-CCCc-CHHHHHHHHHhcCCEEEEEccchhhhhhcccCC
Confidence 77776653 589999999999962 5788888877754 6665 8999999999999999999987443321 12
Q ss_pred CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHH
Q 001769 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1016)
Q Consensus 778 ~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a 856 (1016)
.+.. ++|+++.|+||+|+ ||.+|++++++ ++...+.... ..+..++ +. ....+..+
T Consensus 210 ~~~~-~~dv~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~-~~-~~~~~a~~ 266 (402)
T cd00378 210 NPLP-GADVVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV--------------FPGLQGG-PH-LHVIAAKA 266 (402)
T ss_pred Cccc-CCcEEEeccccCCC------CCCceEEEeccHHHHHHHHHHh--------------CccccCC-ch-HHHHHHHH
Confidence 2334 78999999999983 45567777765 6554431100 0001111 11 01111112
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
.+ +..+-..++.+..++..++++++.+.|++ ++++.. ... ..|-+.+++.+
T Consensus 267 ~a-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~--~~~~v~v~~~~ 318 (402)
T cd00378 267 VA-LKEALEPEFKAYAKQVVENAKALAEALKERGFKVVS-GGT--DNHLVLVDLRP 318 (402)
T ss_pred HH-HHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEee-cCC--CCeEEEEeCCc
Confidence 22 22222235677788899999999999987 466542 111 23446677763
No 206
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=1.2e-14 Score=170.67 Aligned_cols=142 Identities=20% Similarity=0.158 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
+.++++.+|++.|.+. +.++++||+|+.+++.++ + ++||+||++..+|+++...+...++..|++++++|++
T Consensus 66 ~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~l-l--~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~ 140 (433)
T PRK08134 66 VAVLEERVAALEGGVG--AIATASGQAALHLAIATL-M--GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDID 140 (433)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHH
Confidence 5668899999999876 788999999999877776 3 2799999999999998888766556789999999864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cccc
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg 360 (1016)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|| ..++.+.+..|-++|||+++.|+ |+++
T Consensus 141 ~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD-~t~a~~~~~~pl~~GaD~vv~S~tK~l~ 213 (433)
T PRK08134 141 GWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVD-STFTTPYLLRPFEHGADLVYHSATKFLG 213 (433)
T ss_pred HHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEeccccccC
Confidence 4555 8889999999887 68999999999999999999999994 45566666667789999999999 5443
No 207
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.65 E-value=3.3e-14 Score=164.13 Aligned_cols=277 Identities=17% Similarity=0.203 Sum_probs=178.8
Q ss_pred HhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 205 ~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
..+|......++++.+++++|.+ ...++.+|+.++.+++.++ . ++||+|++++..|+++...++. .|.+++
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~-~--~~gd~V~~~~~~~~~~~~~~~~----~g~~~~ 148 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTAL-A--GKGDLIVSDKLNHASLIDGARL----SRARVR 148 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHh-C--CCCCEEEEeCccCHHHHHHHHh----cCCceE
Confidence 44455566778889999999964 3566677776666544443 2 3799999999999999887643 466666
Q ss_pred EeC---chhhhc-cCC---CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC----------CCc
Q 001769 285 VSD---LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGE 346 (1016)
Q Consensus 285 ~vd---~~~L~~-l~~---~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~----------pg~ 346 (1016)
.++ ++++++ +.+ .++++++..+ |.+|.+.|+++|+++||++|+++++| +..+.+.+.. ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D-e~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD-EAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccccCCCCCchHHhhCCCC
Confidence 664 455665 533 3555555555 57899999999999999999999994 4444443321 111
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhH
Q 001769 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1016)
Q Consensus 347 ~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~ 425 (1016)
..-+|+++|. |.|+. ++ |++..++++.+.+-.. ..+ +.. . +..| +..
T Consensus 228 ~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~---------~~~-~~~-----------~-~~~~---~~~ 275 (385)
T PRK05958 228 EPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINR---------ARP-FIF-----------T-TALP---PAQ 275 (385)
T ss_pred CCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHh---------Ccc-cee-----------c-CCCC---HHH
Confidence 2234777776 87753 12 6777777665543100 000 000 0 0011 111
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeecc
Q 001769 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1016)
Q Consensus 426 l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~ 502 (1016)
..+..+++ .++.. . +++.+++.++.+++.+.|+++| +++..+ ...-+.+..++ +.++.+.|.++||.+...
T Consensus 276 ~aa~~aal--~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 276 AAAARAAL--RILRR-E-PERRERLAALIARLRAGLRALG-FQLMDS-QSAIQPLIVGDNERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHHHH--HHHhc-C-HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCceEecc
Confidence 21222232 33322 2 5678889999999999999887 776532 11224444443 678999999999988642
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 -------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..+.+|+|++.+++++|++++++.|..
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 135799999999999999999999863
No 208
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.65 E-value=1.8e-14 Score=166.94 Aligned_cols=213 Identities=24% Similarity=0.255 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|++.|.+. +.++.+|++++.++++++. ++||+||++...|+.+...+...++..|++++++|.+
T Consensus 56 ~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al~---~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~ 130 (380)
T TIGR01325 56 VAAFEERIAALEGAER--AVATATGMSAIQAALMTLL---QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLN 130 (380)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh---CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHH
Confidence 4567789999999865 6789999999998887763 2789999999999988887776677789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ +++++++|++++| |.+|.+.|+++|.++||++|++++|+ +.++.+....|-++|+||++.|. |.|+++ |
T Consensus 131 ~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD-~a~~~~~~~~pl~~g~Divv~S~sK~l~g~---g 206 (380)
T TIGR01325 131 AWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD-NVFATPVLQQPLKLGADVVVYSATKHIDGQ---G 206 (380)
T ss_pred HHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeeccceecCC---C
Confidence 4555 7788999999998 67999999999999999999999994 45555555566788999999998 777532 1
Q ss_pred CcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 367 GP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
-.-+|++..++++.+.+-. .++..|.. .++.. | ++...+.+-+...
T Consensus 207 ~~~gG~vv~~~~~~~~l~~-------------------------~~~~~g~~----~~p~~---a--~~~l~~l~tl~~r 252 (380)
T TIGR01325 207 RVMGGVIAGSEELMAEVAV-------------------------YLRHTGPA----MSPFN---A--WVLLKGLETLSLR 252 (380)
T ss_pred CeEEEEEEeCHHHHHHHHH-------------------------HHHhhCCC----CCHHH---H--HHHHhccCcHHHH
Confidence 1224778777766554310 01111111 11211 1 2344556667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++.++++.|+++++++
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 7888899999999999886454
No 209
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.65 E-value=1.5e-14 Score=168.70 Aligned_cols=277 Identities=15% Similarity=0.115 Sum_probs=174.4
Q ss_pred HHHHH-HHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEe--
Q 001769 211 ESLLN-FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVS-- 286 (1016)
Q Consensus 211 e~i~e-~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~-~a~~~gi~v~~v-- 286 (1016)
+.+.+ .++.+++++|.+.+++ +..+||.++.+++.++. ++||+|+++...|+.+...+.. .++..|.+++.+
T Consensus 64 ~~l~~~~~~~~~~~~g~~~~~v-~~~sgt~a~~~~l~~l~---~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 139 (402)
T cd00378 64 DEIEDLAIERAKKLFGAEYANV-QPHSGSQANLAVYFALL---EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY 139 (402)
T ss_pred HHHHHHHHHHHHHHhCCCceee-ecCCcHHHHHHHHHHhc---CCCCEEEEecCccCccccccccccccccceeEEEecC
Confidence 34444 4567889999987544 33467888777777662 3899999999999876554321 123346544433
Q ss_pred ---------Cchhhhc-c-CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcccce
Q 001769 287 ---------DLKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGAD 350 (1016)
Q Consensus 287 ---------d~~~L~~-l-~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-----~~pg~~GaD 350 (1016)
|++++++ + .+++++|++.+|+ +|...|+++|+++||++|++++++ +.+..+.. ..+.. ++|
T Consensus 140 ~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~-~~~~~~~~~I~~l~~~~~~~li~D-~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 140 GVDPETGLIDYDALEKMALEFKPKLIVAGASA-YPRPIDFKRFREIADEVGAYLLVD-MAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-cCCCcCHHHHHHHHHhcCCEEEEE-ccchhhhhhcccCCCccc-CCc
Confidence 2344555 5 4578888877764 478889999999999999999994 33333322 22223 789
Q ss_pred EEEecC-ccccccCCCCCcceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHH
Q 001769 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1016)
Q Consensus 351 ivvgs~-k~lg~P~g~GGP~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a 428 (1016)
++++|+ |+|+ ||..|++.+++ ++.+.+.... .+ + ..++++. +...+
T Consensus 217 v~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~~---~~~~a 264 (402)
T cd00378 217 VVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV---------FP-G-------------LQGGPHL---HVIAA 264 (402)
T ss_pred EEEeccccCCC------CCCceEEEeccHHHHHHHHHHh---------Cc-c-------------ccCCchH---HHHHH
Confidence 999998 7663 44556777665 6665541000 00 0 0011111 12222
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-CccEEEEecC--C--HHHHHHHHHHcCceeecc-
Q 001769 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCA--D--AHAIASAAYKIEMNLRVV- 502 (1016)
Q Consensus 429 ~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~-~~~~v~i~~~--~--~~~v~~~L~~~GI~~~~~- 502 (1016)
+..++ ......++++..+++.++++++++.|++.| +++...+ ....+.+.++ + ...+.+.|.++||.+...
T Consensus 265 ~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 265 KAVAL--KEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 22222 222222567788889999999999999987 8876321 1223445543 2 567777788889988531
Q ss_pred ---------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001769 503 ---------DSNTVTASFDETT----TLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 ---------~~~~lris~te~~----t~edid~ll~aL~~ 529 (1016)
.+..+|++++..+ +.+|++.+++.|..
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 2357999998865 79999999999864
No 210
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.65 E-value=2.6e-14 Score=165.51 Aligned_cols=212 Identities=17% Similarity=0.155 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|++.|.+. +.++.+|++++.+++..+ ++||+|++++..|+.+...+...++..|++++.+|..
T Consensus 52 ~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l~~l----~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e 125 (380)
T PRK06176 52 RFALEELIADLEGGVK--GFAFASGLAGIHAVFSLF----QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLS 125 (380)
T ss_pred HHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHc----CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHH
Confidence 3457789999999876 678899998887655322 3799999999999999988887778889999988764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+ +..+.+....|.++|+|++++|+ |.+++|-
T Consensus 126 ~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD-~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~--- 201 (380)
T PRK06176 126 QIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD-NTFATPYYQNPLLLGADIVVHSGTKYLGGHS--- 201 (380)
T ss_pred HHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCCEEEecCceeccCCc---
Confidence 4555 7789999999998 68999999999999999999999994 45565555667789999999998 7665432
Q ss_pred CcceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
..-+|++.+++ ++..++. ..|+.-|. .. .+. ..|+...|-+.+..
T Consensus 202 d~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~--~~--~~~-----~~~l~~~gl~tl~~ 247 (380)
T PRK06176 202 DVVAGLVTTNNEALAQEIA-------------------------FFQNAIGG--VL--GPQ-----DSWLLQRGIKTLGL 247 (380)
T ss_pred cceeeEEEecHHHHHHHHH-------------------------HHHHHhcC--CC--CHH-----HHHHHHhccCcHHH
Confidence 11246777654 3333220 00111010 00 010 12344455666677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..++..+++..+++.|++...+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 77777889999999999874343
No 211
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.65 E-value=6.5e-15 Score=178.65 Aligned_cols=281 Identities=12% Similarity=0.098 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHH-HHHhhcCCCeEEEEeCc-
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI-CITRADGFDIKVVVSDL- 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~-l~~~a~~~gi~v~~vd~- 288 (1016)
..+.+.|+..|+++|++.+.. +++|+|+++.++++|.. ++||+||+++++|.|+... +. ..|.+.+++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyF-lvNGTS~gn~a~i~a~~---~~Gd~VLvdRN~HKSv~hgaLi----LsGa~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYF-VLNGTSASNKVVTNALL---TPGDLVLFDRNNHKSNHHGALI----QAGATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEE-EeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----HcCCeEEEeecc
Confidence 467899999999999997544 77899999999999874 3899999999999999975 42 24777777543
Q ss_pred ------------hh-----hhc-cC---CC-------EeEEEEEcCCCCeeeccHHHHHHH-HHhCCcEEEEEeccc-cc
Q 001769 289 ------------KD-----IDY-KS---GD-------VCGVLVQYPGTEGEVLDYGDFIKN-AHANGVKVVMATDLL-AL 338 (1016)
Q Consensus 289 ------------~~-----L~~-l~---~~-------t~~V~v~~pn~~G~i~dl~eI~~l-ah~~GalviV~a~~~-al 338 (1016)
++ +++ +. ++ .++|++|+|||+|.+.|+++|+++ +|.++ .++|+ .+| ++
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvD-EAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFD-SAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEe-Ccchhh
Confidence 22 443 32 22 689999999999999999999999 68888 88883 333 11
Q ss_pred ----cCC----CCCCcccce----EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecc
Q 001769 339 ----TIL----KPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ 405 (1016)
Q Consensus 339 ----g~l----~~pg~~GaD----ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lq 405 (1016)
..+ ....+.|+| +++.|. |.++. +. .++++++++..++ | .+.|
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lT----QaS~LHvk~~~i~-------g-------~~~~----- 379 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FS----QTSQIHKKDNHIK-------G-------QARY----- 379 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hh----hHhhhhcCCcccc-------c-------cccc-----
Confidence 111 112578999 999999 55543 22 3467776544211 1 0000
Q ss_pred cccccccccccCCccchhhHHHHHHHHHHH--HHh-CcccHHHHHHHHHHHHHHHHHHH-hcCCCeEEcCC---------
Q 001769 406 TREQHIRRDKATSNICTAQALLANMAAMYA--VYH-GPEGLKTIAQRVHGLAGTFALGL-KKLGTVEVQGL--------- 472 (1016)
Q Consensus 406 treqhiRRekaTsnicT~~~l~a~~Aa~y~--~~~-g~~Gl~~ia~~~~~~a~~L~~~L-~~~G~~~l~~~--------- 472 (1016)
-.|.|...+=.-.-|+++.+.++|++-. .++ ++.| +++.+++.+++..+++.| +.+.+++++.+
T Consensus 380 --v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~ 456 (720)
T PRK13578 380 --CPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQ 456 (720)
T ss_pred --CCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccc
Confidence 0111222222233466889999999832 222 2345 556777888899999988 55544776521
Q ss_pred --------------------C------------CccE--EEEecCC--------------HHHHHHHHHHcCceeecccC
Q 001769 473 --------------------P------------FFDT--VKVKCAD--------------AHAIASAAYKIEMNLRVVDS 504 (1016)
Q Consensus 473 --------------------~------------~~~~--v~i~~~~--------------~~~v~~~L~~~GI~~~~~~~ 504 (1016)
. .+|+ ++|.+++ +..+.+.|+++||.++..+.
T Consensus 457 ~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~ 536 (720)
T PRK13578 457 DYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDL 536 (720)
T ss_pred cCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCC
Confidence 0 1232 4444443 37899999888999999888
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001769 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 505 ~~lris~te~~t~edid~ll~aL~ 528 (1016)
..+.+-++..+|++++++|+++|.
T Consensus 537 ~~vL~l~s~g~t~~~~~~Lv~aL~ 560 (720)
T PRK13578 537 NSILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999986
No 212
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.64 E-value=4.9e-14 Score=165.70 Aligned_cols=303 Identities=16% Similarity=0.180 Sum_probs=182.9
Q ss_pred ChHHHHHHHHhCCCcccccCCChhHHh-hhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEE
Q 001769 180 VPPVILRNIMENPAWYTQYTPYQAEIA-QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1016)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytPyq~e~s-qG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~V 258 (1016)
+|..+.+++.+ ++..|++....+. ..+-+.+..+++.+|+|+|.+. +.+++++++++.+++.++ .+|++|
T Consensus 93 l~~~vieAv~~---~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l----~~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTD---AARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL----AKGKEV 163 (454)
T ss_pred CCHHHHHHHHH---HHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh----CCcCEE
Confidence 66666556653 3334432111121 1123456778899999999987 667889988876665443 279999
Q ss_pred EEcCCCCHHHHHH--HHHhhcCCCeEEEEeCc------hhhhc-cCCCEeEEEEEcC-CC--Ce--eeccHHHHHHHHHh
Q 001769 259 IIASNCHPQTIDI--CITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHA 324 (1016)
Q Consensus 259 lvs~~~Hps~~~~--l~~~a~~~gi~v~~vd~------~~L~~-l~~~t~~V~v~~p-n~--~G--~i~dl~eI~~lah~ 324 (1016)
|+++.+|+++-.. +....+..|+++++++. +++++ ++++|++|++.++ |+ .| .+.|+++|+++||+
T Consensus 164 Ivs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~ 243 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGRE 243 (454)
T ss_pred EECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHH
Confidence 9999988643111 01123457999999864 45666 8899999988765 44 46 58899999999999
Q ss_pred CCcEEEEEecccc-------ccC-----CCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeee
Q 001769 325 NGVKVVMATDLLA-------LTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 391 (1016)
Q Consensus 325 ~GalviV~a~~~a-------lg~-----l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s 391 (1016)
+|++++|+. ... +++ +..+.++|+|++++|+ |+| |||.+|++++++++++++...-++
T Consensus 244 ~g~~vivD~-~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~-- 314 (454)
T TIGR00474 244 HGLPVMEDL-GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLT-- 314 (454)
T ss_pred cCCeEEEEC-CCcccccchhccCCCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhH--
Confidence 999999953 110 111 1234578999999999 555 566789999999888776321110
Q ss_pred ecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH--HH----HHhCcccHHHHH---HHHHHHHHHHHHHHh
Q 001769 392 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTIA---QRVHGLAGTFALGLK 462 (1016)
Q Consensus 392 ~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~--y~----~~~g~~Gl~~ia---~~~~~~a~~L~~~L~ 462 (1016)
| ..|-.|- .+.++.+.+ |+ +|..-.|++.+. ++..++|..+++.|+
T Consensus 315 ---------------r--~lr~~k~--------~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~ 369 (454)
T TIGR00474 315 ---------------R--ALRVDKL--------TLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLK 369 (454)
T ss_pred ---------------H--HHhhChH--------HHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHH
Confidence 0 0111111 111222222 21 233333444333 345567888888887
Q ss_pred cC--CCe--EEcC-C--------C--CccEEEEec--CC--HHHHHHHHHHcCc--eeecccCCeEEEEeccCCCHHHHH
Q 001769 463 KL--GTV--EVQG-L--------P--FFDTVKVKC--AD--AHAIASAAYKIEM--NLRVVDSNTVTASFDETTTLEDVD 521 (1016)
Q Consensus 463 ~~--G~~--~l~~-~--------~--~~~~v~i~~--~~--~~~v~~~L~~~GI--~~~~~~~~~lris~te~~t~edid 521 (1016)
++ .++ ++.. . | ..+++.+.+ .+ +.++.++|++... ..+ +..+.+.+-+-- -.++|++
T Consensus 370 ~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r-~~~~~~~ld~r~-~~~~~~~ 447 (454)
T TIGR00474 370 AALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGR-IEDDRFLLDLRT-LLEDEEE 447 (454)
T ss_pred hhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCc-CCHHHHH
Confidence 64 123 3331 1 1 234444433 33 7899999997653 443 445656555443 3567888
Q ss_pred HHHHHH
Q 001769 522 KLFIVF 527 (1016)
Q Consensus 522 ~ll~aL 527 (1016)
.+++.|
T Consensus 448 ~~~~~~ 453 (454)
T TIGR00474 448 LLIEAL 453 (454)
T ss_pred HHHHHh
Confidence 777765
No 213
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.64 E-value=3.1e-14 Score=165.92 Aligned_cols=212 Identities=20% Similarity=0.211 Sum_probs=151.2
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
.++++.+|++.|++. +.++.+|++++.+++++. . ++||+|++++..|+++...++..++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~G~~~--~~~~~sG~~Ai~~~l~~~-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 142 (398)
T PRK07504 68 DMFEKRMCALEGAED--ARATASGMAAVTAAILCQ-V--KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDN 142 (398)
T ss_pred HHHHHHHHHHhCCCe--eeEecCHHHHHHHHHHHH-h--CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 457789999999987 445778888876656554 2 379999999999999888877666778999998764 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|+ +.++.+....|.++|+|++++|. |.|+++ |.
T Consensus 143 l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD-~a~a~~~~~~~~~~gaDivv~S~sK~l~g~---g~ 218 (398)
T PRK07504 143 WEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD-NVFATPLFQKPLELGAHIVVYSATKHIDGQ---GR 218 (398)
T ss_pred HHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE-CCccccccCCchhhCCCEEEeeccccccCC---cc
Confidence 666 7889999999998 68999999999999999999999994 55666666677889999999998 777542 21
Q ss_pred cceEEEEeehhhhhc-CCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~~~l~~~-lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
.-+|++..+++++.+ +. ...+..|. . ... ..|+ +...+-+-+...
T Consensus 219 ~~GG~vv~~~~~i~~~~~-------------------------~~~~~~g~-~---~s~---~~A~--~~l~~L~tl~~R 264 (398)
T PRK07504 219 CLGGVVLSDKAWIEEHLQ-------------------------DYFRHTGP-S---LSP---FNAW--TLLKGLETLPVR 264 (398)
T ss_pred ceEEEEEeCcHHHHHHHH-------------------------HHHHHhCC-C---CCH---HHHH--HHHhccchHHHH
Confidence 224677766554321 10 00011111 0 011 1121 233445556666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++.++++.|++.++++
T Consensus 265 ~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 265 VRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 6777899999999999875454
No 214
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.64 E-value=2.8e-14 Score=162.74 Aligned_cols=244 Identities=13% Similarity=0.166 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHhCCCce--e-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCccc-cHHHHHhCCcEE
Q 001769 630 YQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGT-NPATAAMCGMKI 704 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~~--~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vl-v~~saHg~-~~~~a~~~G~~v 704 (1016)
+.+.+.++++++++++|.+.. . ++..+|++|..+++.++. .++++++ +....++. ....++..|.++
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~ 100 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGKLLVLINGAYGERLAKICEYLGIPH 100 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCeEEEECCCchhhHHHHHHHHcCCce
Confidence 346788999999999999842 2 345566665544433321 1344544 45544443 344567899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccC
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~G 783 (1016)
+.++.++++.+|+++++++++++ ++++.|++.++ |.+|.+. |+++|+++||++|+++++|+++.++... ....+++
T Consensus 101 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~livD~~~s~g~~~-~~~~~~~ 177 (355)
T TIGR03301 101 TDLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILN-PLEAIAKVARSHGAVLIVDAMSSFGAIP-IDIEELD 177 (355)
T ss_pred EEEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchh-HHHHHHHHHHHcCCEEEEEeccccCCcc-cchhhcC
Confidence 99999877889999999999742 46677777776 5689997 8999999999999999999876543211 2345678
Q ss_pred CcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCC----CCCCCcCCCCCCccCCccc-hhhHHHHHHH
Q 001769 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG----IPAPEKSQPLGTIAAAPWG-SALILPISYT 858 (1016)
Q Consensus 784 aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~----~~~re~~~~~g~i~s~~~G-~a~~~~~a~a 858 (1016)
+|+++.++||+++ |+||+|++++++++.+.+.......... +...++. +.. +++ +......+..
T Consensus 178 ~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~t~~~~~~~a~~~ 246 (355)
T TIGR03301 178 VDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKT---GKW---RFTPPTHTVYAFAQ 246 (355)
T ss_pred ccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhc---CCC---CCCCcHHHHHHHHH
Confidence 9999999999984 5578999999987665443211100000 0000000 100 111 1222333345
Q ss_pred HHHHhChhh-HHHHHHHHHHHHHHHHHHHhc-cCCcccc
Q 001769 859 YIAMMGSKG-LTEASKIAILNANYMAKRLEK-HYPILFR 895 (1016)
Q Consensus 859 ~l~~lG~eG-l~~~~~~~~~nA~yla~~L~~-~~~v~y~ 895 (1016)
.+..+-.+| +.+..++...+++++.+.|++ ++++..+
T Consensus 247 al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~ 285 (355)
T TIGR03301 247 ALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLP 285 (355)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecC
Confidence 566665565 888888899999999999987 4555443
No 215
>PRK04311 selenocysteine synthase; Provisional
Probab=99.64 E-value=4.6e-14 Score=166.33 Aligned_cols=305 Identities=17% Similarity=0.185 Sum_probs=183.5
Q ss_pred ChHHHHHHHHhCCCcccccCCChhHHhh-hHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEE
Q 001769 180 VPPVILRNIMENPAWYTQYTPYQAEIAQ-GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1016)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytPyq~e~sq-G~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~V 258 (1016)
+|..+.+++.+ +...|......+.. .+-+.+..+++.+|+|+|.+. +.+++++++++..++.++ .++++|
T Consensus 98 l~~~v~eav~~---~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l----~~GdeV 168 (464)
T PRK04311 98 LSEAAIEAVTE---AARGYSNLEYDLATGKRGSRDRALAALLCALTGAED--ALVVNNNAAAVLLALNAL----AAGKEV 168 (464)
T ss_pred CCHHHHHHHHH---HHhcccccccchhhcccchHHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh----CCCCEE
Confidence 66666556653 23333321111221 122446678899999999985 778899998776655443 278999
Q ss_pred EEcCCCCHHHHHH--HHHhhcCCCeEEEEeCc------hhhhc-cCCCEeEEEEEcC-CC--Ce--eeccHHHHHHHHHh
Q 001769 259 IIASNCHPQTIDI--CITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHA 324 (1016)
Q Consensus 259 lvs~~~Hps~~~~--l~~~a~~~gi~v~~vd~------~~L~~-l~~~t~~V~v~~p-n~--~G--~i~dl~eI~~lah~ 324 (1016)
|+++.+|.++-.. +....+..|+++++++. +++++ ++++|++|++.++ |+ +| .+.|+++|+++||+
T Consensus 169 Ivs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~ 248 (464)
T PRK04311 169 IVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKE 248 (464)
T ss_pred EEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHH
Confidence 9999887643110 11223457999988774 35666 8889999988875 54 45 56799999999999
Q ss_pred CCcEEEEEeccc------cccC-----CCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 325 NGVKVVMATDLL------ALTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 325 ~GalviV~a~~~------alg~-----l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
+|++++||+-.- .+++ +..+.++|+|++++|+ |.| |||.+|++++++++++++...-++
T Consensus 249 ~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~--- 319 (464)
T PRK04311 249 HGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLK--- 319 (464)
T ss_pred cCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhH---
Confidence 999999954110 1111 1223458999999999 554 567789999999988876421111
Q ss_pred cCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH--HH----HHhCcccHHHH---HHHHHHHHHHHHHHHhc
Q 001769 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTI---AQRVHGLAGTFALGLKK 463 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~--y~----~~~g~~Gl~~i---a~~~~~~a~~L~~~L~~ 463 (1016)
| ..|-.|. .+.++-+.+ |+ .+.+-.+++.+ .++..++|..+++.|++
T Consensus 320 --------------r--~lr~dk~--------~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~ 375 (464)
T PRK04311 320 --------------R--ALRVDKL--------TLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKA 375 (464)
T ss_pred --------------H--HHhcchH--------HHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 0 0011121 122222222 21 12222332222 24556678888888876
Q ss_pred CC--Ce--EEcCC---------C--CccEEEEec--CC--HHHHHHHHHHcC--ceeecccCCeEEEEeccCCCHHHHHH
Q 001769 464 LG--TV--EVQGL---------P--FFDTVKVKC--AD--AHAIASAAYKIE--MNLRVVDSNTVTASFDETTTLEDVDK 522 (1016)
Q Consensus 464 ~G--~~--~l~~~---------~--~~~~v~i~~--~~--~~~v~~~L~~~G--I~~~~~~~~~lris~te~~t~edid~ 522 (1016)
.. ++ ++... | ..+++.+.+ .+ +.++.++|++.. |..+ +..+.+.+-+-- -.++|++.
T Consensus 376 ~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~r~-~~~~~~~~ 453 (464)
T PRK04311 376 ALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR-IEDGRLLLDLRT-LEEEDEER 453 (464)
T ss_pred ccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCc-CCHHHHHH
Confidence 52 22 33311 1 234444433 33 789999999754 4444 455666655443 35678888
Q ss_pred HHHHHh
Q 001769 523 LFIVFA 528 (1016)
Q Consensus 523 ll~aL~ 528 (1016)
+++.|.
T Consensus 454 ~~~~~~ 459 (464)
T PRK04311 454 LAAALL 459 (464)
T ss_pred HHHHHH
Confidence 888775
No 216
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.64 E-value=2.3e-15 Score=176.89 Aligned_cols=223 Identities=22% Similarity=0.267 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc----c--cHHHHHhCCcEEE
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIV 705 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg----~--~~~~a~~~G~~vv 705 (1016)
....++++.+++++|.+.+ +.+++|++|...++.+ + .++++||+++..|. + .+..+...|++++
T Consensus 122 ~r~~~le~~lA~l~gae~a-lvv~sg~aAi~l~l~~---l------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~ 191 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDA-LVVNNNAAAVLLALNT---L------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLV 191 (454)
T ss_pred hHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHH---h------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEE
Confidence 3467899999999999875 4567787665333322 1 25789999987652 2 2344667899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCC---cc--ccccHHHHHHHHHHcCcEEEEEcccc-------c--
Q 001769 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTH---GV--YEEGIDEICKIIHDNGGQVYMDGANM-------N-- 771 (1016)
Q Consensus 706 ~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~---G~--i~~di~~I~~ia~~~g~lv~vDga~~-------~-- 771 (1016)
+++.+ +..|+++++++|+ ++|++|++++++++ |. +. |+++|+++||++|+++++|++.- +
T Consensus 192 ~v~~~--~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~-dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl 265 (454)
T TIGR00474 192 EVGTT--NRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEV-SIAELVALGREHGLPVMEDLGSGSLVDLSRYGL 265 (454)
T ss_pred EeCCC--CCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCC-CHHHHHHHHHHcCCeEEEECCCcccccchhccC
Confidence 98763 4578999999998 89999999998643 53 43 89999999999999999996410 0
Q ss_pred -cccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccC---CCC--CCCCcCCCCCCccCC
Q 001769 772 -AQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST---GGI--PAPEKSQPLGTIAAA 845 (1016)
Q Consensus 772 -a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~---g~~--~~re~~~~~g~i~s~ 845 (1016)
..+.+..+.++|+|++++|+||+| |||.+|++++++++.+.+........ ++. .. .+...+...+
T Consensus 266 ~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~--l~~~l~~~~~- 336 (454)
T TIGR00474 266 PDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLTRALRVDKLTLAA--LEATLRLYLD- 336 (454)
T ss_pred CCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhHHHHhhChHHHHH--HHHHHHHHhC-
Confidence 011123566899999999999998 56778999999877665543222110 000 00 0000111110
Q ss_pred ccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 846 ~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+ -.+|+...|.+.|....+++.++|..++++|++
T Consensus 337 ~---------~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~ 370 (454)
T TIGR00474 337 P---------EKALEKIPTLRMLTQSPEELRARAERLAKRLKA 370 (454)
T ss_pred c---------hhhhhhchHHHHhccCHHHHHHHHHHHHHHHHh
Confidence 0 124566667777888888999999999999976
No 217
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=3.5e-14 Score=168.37 Aligned_cols=253 Identities=18% Similarity=0.144 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHhCCCc----eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH--------HhC
Q 001769 633 MFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA--------AMC 700 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~----~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a--------~~~ 700 (1016)
+....++..+++|+.+. ++++++||+++++++++++. +++|+|+..+-.||.|...+ ...
T Consensus 81 lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~ 152 (475)
T PLN03226 81 IETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--------QPHDRIMGLDLPHGGHLSHGYQTDGKKISAT 152 (475)
T ss_pred HHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--------CCCCEEEECCCCcCcchhhhhhhcccccccc
Confidence 33345567888999886 56788999998887777763 36789998554444333221 122
Q ss_pred CcEEEEE--cCC-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-
Q 001769 701 GMKIVSV--GTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL- 776 (1016)
Q Consensus 701 G~~vv~v--~~d-~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l- 776 (1016)
+..+..+ ..+ ++|.+|+++|++++.+ .+++.|++.. +.++... |+++|+++||++|++++||+||..++.+.
T Consensus 153 ~~~~~~~~y~~~~~~g~iD~d~Le~~l~~--~~pklIv~~~-S~~s~~~-D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~ 228 (475)
T PLN03226 153 SIYFESMPYRLDESTGLIDYDKLEKKAML--FRPKLIIAGA-SAYPRDW-DYARMRKIADKVGALLMCDMAHISGLVAAQ 228 (475)
T ss_pred eEEEEeeeeeecCCCCCcCHHHHHHHHhh--cCCeEEEEec-CcCCCcc-CHHHHHHHHHHcCCEEEEEchhhhCcccCC
Confidence 2222222 334 4589999999999974 3556565533 4567766 99999999999999999999997665532
Q ss_pred --CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCC-CccCCccchhhHH
Q 001769 777 --TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALIL 853 (1016)
Q Consensus 777 --~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g-~i~s~~~G~a~~~ 853 (1016)
..|.+ ++|++++++||||. ||.+|+|++++++.+.+.+...+.. .+.. ....+.. ...+++. ...+
T Consensus 229 ~~~~p~~-~~Div~~t~hK~L~------GP~Gg~I~~~~~~~~~~~~g~~~~~-d~~~-~i~~a~~~~~~g~p~--~~~i 297 (475)
T PLN03226 229 EAASPFE-YCDVVTTTTHKSLR------GPRGGMIFFRKGPKPPKGQGEGAVY-DYED-KINFAVFPGLQGGPH--NHTI 297 (475)
T ss_pred CCCCCCC-CCeEEEecCccccc------CCCceEEEEchhhcccccCCCccHH-HHHH-HhccccCCccCCCch--HHHH
Confidence 13433 79999999999994 4444788888765543322110000 0000 0000000 0111111 1222
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
+...+.+..+-..|++++.++...|+++|++.|++ ++++..+|. ..|-+++++++
T Consensus 298 aal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t---~~hi~lv~~~~ 353 (475)
T PLN03226 298 AALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGT---DNHLVLWDLRP 353 (475)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC---CCCEEEEEccC
Confidence 33345566665667888899999999999999987 788876543 35778888864
No 218
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=2.1e-14 Score=168.57 Aligned_cols=142 Identities=24% Similarity=0.251 Sum_probs=118.4
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~ 290 (1016)
..+++.+|++.|.+. +.++.+|++++.++++++ . ++||+|++++..|+.+...+...++..|++++.+|.. +
T Consensus 67 ~~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~l-l--~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~ 141 (431)
T PRK08248 67 DVFEKRIAALEGGIG--ALAVSSGQAAITYSILNI-A--SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPEN 141 (431)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHH
Confidence 346789999999765 889999999998888776 2 2799999999999998888877777899999998864 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~ 361 (1016)
+++ +++++++|++++| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|+ |.+++
T Consensus 142 l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD-~t~a~~~~~~pl~~gaDivv~S~tK~lgg 214 (431)
T PRK08248 142 FEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVD-NTFASPYLLRPIEHGADIVVHSATKFIGG 214 (431)
T ss_pred HHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEe-CCCCccccCChhHcCCCEEEEcCccccCC
Confidence 555 7788999999887 78999999999999999999999994 45555556666789999999998 66643
No 219
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.63 E-value=5.2e-14 Score=165.02 Aligned_cols=272 Identities=14% Similarity=0.121 Sum_probs=173.5
Q ss_pred HHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEeCc------
Q 001769 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL------ 288 (1016)
Q Consensus 216 ~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~-~a~~~gi~v~~vd~------ 288 (1016)
.+..+++++|.+.+++ ++.+||.++++++.++ . ++||+|+++...|+++...+.. .....|++++.++.
T Consensus 76 ~~~~la~~~g~~~~~i-~~~sgt~al~~~l~~l-~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 151 (416)
T PRK00011 76 AIDRAKELFGAEYANV-QPHSGSQANAAVYFAL-L--KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGL 151 (416)
T ss_pred HHHHHHHHhCCCceee-ecCCchHHHHHHHHHh-c--CCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCC
Confidence 3558999999987654 4456787777766666 3 3799999999999875433211 11234566666543
Q ss_pred ---hhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcccceEEEecC-c
Q 001769 289 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA-Q 357 (1016)
Q Consensus 289 ---~~L~~-l~-~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-----~~pg~~GaDivvgs~-k 357 (1016)
+++++ +. .++++|++..+ .+|...|+++|+++||++|++++++ ..++.|.. ..+-. ++|++++|+ |
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~-~~~~~~~~~~I~~la~~~~~~livD-~a~~~g~~~~g~~~~~~~-~~di~~~S~~K 228 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGAS-AYSRPIDFKRFREIADEVGAYLMVD-MAHIAGLVAAGVHPSPVP-HADVVTTTTHK 228 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCC-cCCCccCHHHHHHHHHHcCCEEEEE-CcchhcccccCccCCCCC-CCcEEEecCCc
Confidence 44555 54 36888877654 4677789999999999999999994 23333332 12223 789999998 6
Q ss_pred cccccCCCCCcceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~ 436 (1016)
+|+ ||.+|++.++ +++.+++.... .. + -.+++. .....++.++. .
T Consensus 229 ~l~------g~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~---~~~~aa~~~a~--~ 274 (416)
T PRK00011 229 TLR------GPRGGLILTNDEELAKKINSAV---------FP-G-------------IQGGPL---MHVIAAKAVAF--K 274 (416)
T ss_pred CCC------CCCceEEEeCCHHHHHHHHHHh---------Cc-c-------------ccCCcc---HHHHHHHHHHH--H
Confidence 553 4555777775 56665541000 00 0 001111 11222222222 2
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecC----CHHHHHHHHHHcCceeec----c-----
Q 001769 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA----DAHAIASAAYKIEMNLRV----V----- 502 (1016)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~-~~~~~~v~i~~~----~~~~v~~~L~~~GI~~~~----~----- 502 (1016)
....++++++.++..++++++++.|+++| +++.. ....+.+.+.++ ...++.+.|.++||.++. +
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~ 353 (416)
T PRK00011 275 EALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSP 353 (416)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence 22345788899999999999999999987 88753 121123444443 257889999999998862 1
Q ss_pred -cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001769 503 -DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 503 -~~~~lris~te----~~t~edid~ll~aL~~ 529 (1016)
.+..+|++... ..|++|++.++++|..
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~ 385 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIAD 385 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHHH
Confidence 13568997644 4579999999999863
No 220
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.63 E-value=5.5e-14 Score=162.20 Aligned_cols=212 Identities=21% Similarity=0.184 Sum_probs=150.9
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~ 290 (1016)
..+|+.||+|.|.+. +.++++|.+|+.++++++. ++||+||+++..+..+...++.....+|+++.++|.. +
T Consensus 58 ~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll---~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 58 RALEQRLAALEGGED--ALLFSSGMAAISAALLALL---KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp HHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS----TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred HHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc---ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 346689999999875 8899999999988888773 2799999999999999999998788899999999874 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCC-cEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~G-alviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
+++ ++++|++|++..| |.+..+.||++|+++||++| ++++| ++.++.+++..|-++||||++.|+ |.+++ -|
T Consensus 133 l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vV-DnT~atp~~~~pL~~GaDivv~S~TKyl~G---hs 208 (386)
T PF01053_consen 133 LEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVV-DNTFATPYNQNPLELGADIVVHSATKYLSG---HS 208 (386)
T ss_dssp HHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEE-ECTTTHTTTC-GGGGT-SEEEEETTTTTTT---SS
T ss_pred HHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEe-eccccceeeeccCcCCceEEEeeccccccC---Cc
Confidence 555 7889999999998 78999999999999999999 99999 577777788888999999999998 76652 12
Q ss_pred CcceEEEEeeh--hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHH
Q 001769 367 GPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1016)
Q Consensus 367 GP~~Gfl~~~~--~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~ 444 (1016)
.=-+|.+.++. ++.+++. ..++.-| +.. ++ . ..|+...|-+-|.
T Consensus 209 dv~~G~vv~~~~~~~~~~l~-------------------------~~~~~~G--~~~--~p---~--da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 209 DVMGGAVVVNGSSELYDRLR-------------------------EFRRLLG--ATL--SP---F--DAWLLLRGLRTLP 254 (386)
T ss_dssp SE-EEEEEESSHHHHHHHHH-------------------------HHHHHHT---B----H---H--HHHHHHHHHTTHH
T ss_pred ceeeEEEEECchhhhhhhhc-------------------------chhhhcC--ccc--hH---H--HHHHHhcCCCcHH
Confidence 11246777654 3433320 0011111 000 11 1 1133444445555
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 445 ~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
...++..++|..+++.|++...++
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 566777799999999999985465
No 221
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.63 E-value=2.7e-14 Score=167.40 Aligned_cols=235 Identities=23% Similarity=0.247 Sum_probs=153.4
Q ss_pred HHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH-----HHhCCcEEEEEcCCC
Q 001769 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1016)
Q Consensus 637 l~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~-----a~~~G~~vv~v~~d~ 711 (1016)
+++.+++++|.+...+.+++|++|..+++.++ . +++++|+++...|+.+... ....|++++.++++.
T Consensus 76 ~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l---~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 147 (416)
T PRK00011 76 AIDRAKELFGAEYANVQPHSGSQANAAVYFAL---L-----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE 147 (416)
T ss_pred HHHHHHHHhCCCceeeecCCchHHHHHHHHHh---c-----CCCCEEEEeccccCCccccccccccccceeeEeecCcCc
Confidence 56699999999876676777877654433332 1 3578999999888765321 224467888888874
Q ss_pred -CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccC---cCCCCccCCcEE
Q 001769 712 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSPGYIGADVC 787 (1016)
Q Consensus 712 -~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~---l~~pg~~GaDi~ 787 (1016)
++.+|++++++++++ .++++|+++.++ +|... |+++|+++||++|+++++|+++..++.. ...+.. ++|++
T Consensus 148 ~~~~~d~~~l~~~i~~--~~~k~v~~~~~~-~~~~~-~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 148 ETGLIDYDEVEKLALE--HKPKLIIAGASA-YSRPI-DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred ccCCcCHHHHHHHHHh--cCCCEEEECCCc-CCCcc-CHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 588999999999972 368888886544 46654 8999999999999999999988544321 112334 78999
Q ss_pred EeCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+.|+||+|+ ||.+|+++++ +++.+.+.... ..+..++ +. ....++...+.+. +..+
T Consensus 223 ~~S~~K~l~------g~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~-~~-~~~~aa~~~a~~~-~~~~ 279 (416)
T PRK00011 223 TTTTHKTLR------GPRGGLILTNDEELAKKINSAV--------------FPGIQGG-PL-MHVIAAKAVAFKE-ALEP 279 (416)
T ss_pred EecCCcCCC------CCCceEEEeCCHHHHHHHHHHh--------------CccccCC-cc-HHHHHHHHHHHHH-HHhh
Confidence 999999883 4556777775 45554431100 0001111 11 1122222233333 3356
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEec
Q 001769 867 GLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLR 910 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~ 910 (1016)
++.++.++..++++++.++|++ ++++. ++ +...|-+.+++.
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~~~~~~~~i~~~ 321 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERGFRVV-SG--GTDNHLVLVDLR 321 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--CCCCeEEEEeCc
Confidence 7888999999999999999987 55553 21 122344556664
No 222
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=2.9e-14 Score=165.81 Aligned_cols=212 Identities=20% Similarity=0.106 Sum_probs=155.3
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
.++++.+|++.|.+ ++.++++||+++.++++++ . ++||+||+++..|+.+...+...++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al-~--~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~ 142 (394)
T PRK07050 68 LALAQRLAEIEGGR--HALLQPSGLAAISLVYFGL-V--KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG 142 (394)
T ss_pred HHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHH-h--CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence 45778999999976 4888999999999888777 3 389999999999999888776666778999999876 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ +.++|++|++.+| |.+|.+.|+++|+++||++|++++++ +.++.+....|.++|+||++.|. |.+++. |+
T Consensus 143 l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD-~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~---~~ 218 (394)
T PRK07050 143 IADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID-NTYSAGLAFKPFEHGVDISVQALTKYQSGG---SD 218 (394)
T ss_pred HHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE-CCcccccccCHHHcCCeEEEEECCceecCC---CC
Confidence 666 7889999999998 68899999999999999999999994 56677777778889999999998 877531 22
Q ss_pred cceEEEEe-ehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~-~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
.-+|.+.+ ++++.+++- ..|..-|. |. .+. ..|+...|-+.+...
T Consensus 219 ~~gG~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~-----~a~l~lr~l~tl~~R 264 (394)
T PRK07050 219 VLMGATITADAELHAKLK-------------------------LARMRLGI---GV-SAD-----DCSLVLRGLPSLQVR 264 (394)
T ss_pred eeEEEEEECCHHHHHHHH-------------------------HHHHhcCC---CC-CHH-----HHHHHHcCCCcHHHH
Confidence 22344444 455544430 01111111 10 111 124455566666666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++.++++.|++..++.
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 7777889999999999874343
No 223
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.63 E-value=1.1e-13 Score=161.16 Aligned_cols=213 Identities=19% Similarity=0.194 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~ 289 (1016)
..++++.+|++.|.+. +.++.+|++++.+++.++. ++||+||++...|+++...++..+...|++++.+|. +
T Consensus 66 ~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~all---~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e 140 (398)
T PRK08249 66 VQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTFL---KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHE 140 (398)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHhc---CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHH
Confidence 4567899999999865 7788999988887776652 379999999999999988887667778999998775 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|..+|+|++++|. |.|+++ |
T Consensus 141 ~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~~~Divv~S~sK~l~g~---~ 216 (398)
T PRK08249 141 QIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVD-NTFATPINQNPLALGADLVIHSATKFLSGH---A 216 (398)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCcCccccCCchhhCCCEEeccCceecCCC---C
Confidence 5656 7888999999888 68999999999999999999999994 45555544556678999999998 777532 1
Q ss_pred CcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 367 GP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
.-.+|+++.++++.+++.. .|+..+ . +..+. .+ ++...+.+-+...
T Consensus 217 ~~~gG~vv~~~~l~~~l~~-------------------------~~~~~g---~-~~s~~---~a--~l~l~~l~tL~~R 262 (398)
T PRK08249 217 DALGGVVCGSKELMEQVYH-------------------------YREING---A-TMDPM---SA--YLILRGMKTLKLR 262 (398)
T ss_pred CceEEEEECCHHHHHHHHH-------------------------HHHhcC---C-CCCHH---HH--HHHHhCcchHHHH
Confidence 1124777777666555410 011111 0 11111 11 1234455556666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++..+++.|++.+.++
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 6777899999999999875454
No 224
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=4.2e-14 Score=164.21 Aligned_cols=308 Identities=14% Similarity=0.144 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhccccCCCccccccccccCCCChhhhhccc-----ccccccccCCCCCchhhhhHHHHHHHHHHHHHHH
Q 001769 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPV-----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTI 644 (1016)
Q Consensus 570 E~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~-----~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL 644 (1016)
..++++..+++..+... ..+|.||.|.+.++.+.+.... ..+.+ .|+ | ++|..++.+.+.+++.+.
T Consensus 11 ~~~~~~~~~~~~~~~~~--~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~---~---~~G~~~LReaia~~~~~~ 81 (393)
T COG0436 11 TFAVLAEAKAAAELKGK--EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYT---P---SAGIPELREAIAEKYKRR 81 (393)
T ss_pred hHHHHhHHHHHHHhcCC--CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCC---C---CCCCHHHHHHHHHHHHHH
Confidence 34555544444443322 4578899999888766554432 22222 333 3 679999999999999999
Q ss_pred hCCCc---eeeecCChH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC---CCCCCCH
Q 001769 645 TGFDS---FSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD---AKGNINI 717 (1016)
Q Consensus 645 ~G~~~---~~l~~~sGa-~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d---~~g~iD~ 717 (1016)
.|.+. .++..+.|+ +|.+.+++++. +++|+||+|++.+.++.....+.|.+++.++++ .+..+|+
T Consensus 82 ~~~~~~~~~eiivt~Ga~~al~~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~ 153 (393)
T COG0436 82 YGLDVDPEEEIIVTAGAKEALFLAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDL 153 (393)
T ss_pred hCCCCCCCCeEEEeCCHHHHHHHHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCH
Confidence 88552 225555554 45444444432 478899999999999999999999999999975 3689999
Q ss_pred HHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEcccc-ccccC--cCCCCccC----CcEE
Q 001769 718 EELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVG--LTSPGYIG----ADVC 787 (1016)
Q Consensus 718 ~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~-~a~~~--l~~pg~~G----aDi~ 787 (1016)
++|+++++ ++|++|++++|| .+|.+- +.+++|+++|++||++++.|-+.- +..-+ ..+..+.. -=|+
T Consensus 154 ~~l~~~i~---~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~ 230 (393)
T COG0436 154 EDLEAAIT---PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTIT 230 (393)
T ss_pred HHHHhhcC---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEE
Confidence 99999998 799999999995 688876 478999999999999999997531 11111 11111111 2366
Q ss_pred EeCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhC-h
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG-S 865 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG-~ 865 (1016)
+.|++|+|+++ |+.+|++++. +++.+.+-. + +....+|.+...|. ++.+.|..-. .
T Consensus 231 i~s~SK~~~mt----GwRvG~~v~~~~~l~~~~~~-~-------------~~~~~~~~~~~~Q~----aa~~aL~~~~~~ 288 (393)
T COG0436 231 INSFSKTYGMT----GWRIGWVVGPPEELIAALRK-L-------------KSYLTSCAPTPAQY----AAIAALNGPQSD 288 (393)
T ss_pred Eeccccccccc----ccceeEeecChHHHHHHHHH-H-------------HHhcccCCCHHHHH----HHHHHhcCccch
Confidence 77999999765 7999999999 555544310 0 01112232212221 1222222211 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCccc-cCCCCceeeEEEEEecCchhHHHHHHHHHH
Q 001769 866 KGLTEASKIAILNANYMAKRLEKH--YPILF-RGVNGTVAHEFIVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 866 eGl~~~~~~~~~nA~yla~~L~~~--~~v~y-~g~~~~~~he~i~~~~~~~~~ld~f~~~l~ 924 (1016)
+.++...+....+.+.+.++|.+. +++.- | .|-+ .-| ++++.. ..-..|++.|.
T Consensus 289 ~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p--~Ga~-Y~~-~~i~~~-~d~~~f~~~Ll 345 (393)
T COG0436 289 EVVEEMREEYRERRDLLVEALNEIGGLSVVKPP--EGAF-YLF-PKIPEL-LDSEEFAKKLL 345 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCC--CeeE-EEE-eecCCC-CCHHHHHHHHH
Confidence 244555567788889999999873 66654 3 2222 222 445443 23456666554
No 225
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.62 E-value=3.8e-14 Score=163.28 Aligned_cols=247 Identities=13% Similarity=0.173 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHhCCCc--e-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-Ccccc-HHHHHhCCcEE
Q 001769 630 YQEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTN-PATAAMCGMKI 704 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~--~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~s-aHg~~-~~~a~~~G~~v 704 (1016)
+.+.+.++++.+++++|.+. . .+++++|+.|..+++.++. .++++|+++.. .++.. ...++..|+++
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~ 106 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH 106 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE
Confidence 33567899999999999863 2 3456677766655444431 24556776543 22222 24567889999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccC
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~G 783 (1016)
+.++.++++.+|+++++++++++ +++++|++.+|+ .+|... |+++|+++||++|+++++|+++.++... ....+++
T Consensus 107 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~~livDa~~~~g~~~-~~~~~~~ 183 (368)
T PRK13479 107 VVLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILN-PLDEIAAVAKRHGKRLIVDAMSSFGAIP-IDIAELG 183 (368)
T ss_pred EEEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCcccccc-CHHHHHHHHHHcCCEEEEEcccccCCcc-ccccccC
Confidence 99999888889999999999732 467788899985 689997 8999999999999999999877543222 2334678
Q ss_pred CcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCC-CCCCcCCCCCCccCCccc-hhhHHHHHHHHHH
Q 001769 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI-PAPEKSQPLGTIAAAPWG-SALILPISYTYIA 861 (1016)
Q Consensus 784 aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~-~~re~~~~~g~i~s~~~G-~a~~~~~a~a~l~ 861 (1016)
+|+++.++||+++ |+||+|++++++++.+.+........-.+ .........+.. +|+ +...+....+.+.
T Consensus 184 ~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~t~~~~~~~~l~~al~ 255 (368)
T PRK13479 184 IDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQW---RFTPPTHVVAAFYQALL 255 (368)
T ss_pred ceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCC---CCCCcHHHHHHHHHHHH
Confidence 9999999999985 55678999999876555432211000000 000000000000 011 1111122234444
Q ss_pred HhChh-hHHHHHHHHHHHHHHHHHHHhc-cCCcccc
Q 001769 862 MMGSK-GLTEASKIAILNANYMAKRLEK-HYPILFR 895 (1016)
Q Consensus 862 ~lG~e-Gl~~~~~~~~~nA~yla~~L~~-~~~v~y~ 895 (1016)
.+-.+ |++++.++...+++++.+.|++ ++++..+
T Consensus 256 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 291 (368)
T PRK13479 256 ELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLD 291 (368)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 44333 5788888999999999999987 5665543
No 226
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.62 E-value=5.7e-14 Score=163.84 Aligned_cols=212 Identities=20% Similarity=0.185 Sum_probs=155.6
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~ 290 (1016)
.++++.+|++.|.+ ++.++.+|++++.++++++. ++||+||+++..|+.+...+...++..|++++.+|.. +
T Consensus 73 ~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all---~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 147 (403)
T PRK07810 73 SMFEERLRLIEGAE--ACFATASGMSAVFTALGALL---GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQ 147 (403)
T ss_pred HHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHh---CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 45778999999987 48899999999888777763 3799999999999888877776677789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++|+||+++|+ |.|++ .|.
T Consensus 148 l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~viv-D~a~a~~~~~~~~~~gaDivv~S~tK~l~g---~g~ 223 (403)
T PRK07810 148 WEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVL-DNVFATPLLQRGLPLGADVVVYSGTKHIDG---QGR 223 (403)
T ss_pred HHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCCccccCChhhcCCcEEEccCCceecC---CcC
Confidence 555 7889999999998 6899999999999999999999999 456677766667789999999998 76653 122
Q ss_pred cceEEEEeehhhhhc-CCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~~~l~~~-lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
.-+|+++++++.+.. +. ..++..|. | ..+ ..|+ +...+-+-+...
T Consensus 224 ~~gG~v~~~~~~~~~~l~-------------------------~~~~~~g~---~-~s~---~~a~--l~l~~L~tl~~R 269 (403)
T PRK07810 224 VLGGAILGDREYIDGPVQ-------------------------KLMRHTGP---A-LSA---FNAW--VLLKGLETLALR 269 (403)
T ss_pred ceeEEEEeChHHHHHHHH-------------------------HHHHHhCC---C-CCH---HHHH--HHHhccCcHHHH
Confidence 225788877664421 10 00011111 0 011 1122 244555666777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++.++++.|++.++++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 7778899999999999875454
No 227
>PLN02509 cystathionine beta-lyase
Probab=99.62 E-value=4.8e-14 Score=166.22 Aligned_cols=212 Identities=18% Similarity=0.183 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~ 289 (1016)
..++++.+|++.|.+. +.++.+|++++.+++ ++ . ++||+||+++..|+.+...++......|++++.++. +
T Consensus 135 ~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~l-l--~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e 208 (464)
T PLN02509 135 RDALESLLAKLDKADR--AFCFTSGMAALSAVT-HL-I--KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLD 208 (464)
T ss_pred HHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HH-h--CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHH
Confidence 4567789999999765 677888987765433 33 2 389999999999999988876656678999998775 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+.+..|.++|+|++++|+ |++++| |
T Consensus 209 ~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIV-D~A~a~~~~~~pl~~gaDivv~S~tK~l~G~---g 284 (464)
T PLN02509 209 EVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLV-DNSIMSPVLSRPLELGADIVMHSATKFIAGH---S 284 (464)
T ss_pred HHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEE-ECCccccccCChhhcCCcEEEecCcccccCC---C
Confidence 4555 7889999999998 7899999999999999999999999 456677776777789999999998 777643 3
Q ss_pred CcceEEEEeehhh-hhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~~~l-~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
+..+|+++++++. .+.+ ...++..++ .+....| |+...|-+-|..
T Consensus 285 dv~gG~v~~~~~~l~~~~-------------------------~~~~~~~g~-------~l~p~~A--~l~lr~L~tL~~ 330 (464)
T PLN02509 285 DVMAGVLAVKGEKLAKEV-------------------------YFLQNSEGS-------GLAPFDC--WLCLRGIKTMAL 330 (464)
T ss_pred ccceeEEEeccHHHHHHH-------------------------HHHHHhcCC-------CcCHHHH--HHHHhhhhhHHH
Confidence 3346888876542 2211 000111111 0111111 123333344455
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..++..+++.++++.|++...++
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 56677899999999999875453
No 228
>PLN02242 methionine gamma-lyase
Probab=99.62 E-value=6.9e-14 Score=163.76 Aligned_cols=217 Identities=18% Similarity=0.155 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHh-hcCCCeEEEEeCc---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDL--- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~-a~~~gi~v~~vd~--- 288 (1016)
..++++.+|+++|.+. +.++.+|++++.++++++. ++||+||++...++.+...+... .+..|++++.++.
T Consensus 78 ~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al~---~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~ 152 (418)
T PLN02242 78 VLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQLC---SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDL 152 (418)
T ss_pred HHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh---CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCH
Confidence 4557789999999987 6788999999888877763 37999999999998887776432 3447999888765
Q ss_pred hhhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCC
Q 001769 289 KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 364 (1016)
Q Consensus 289 ~~L~~-l~~-~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g 364 (1016)
+++++ +++ ++++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++. +...+.++|+||+++|. |.|+++
T Consensus 153 e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD-ea~~~-~~~~~~~~g~divv~S~SK~l~g~-- 228 (418)
T PLN02242 153 EAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD-NTFAP-MVLSPARLGADVVVHSISKFISGG-- 228 (418)
T ss_pred HHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE-CCCCc-cCCCHHHcCCcEEEEeCccccCCC--
Confidence 45555 777 4999999998 78999999999999999999999994 45543 23456678999999998 877542
Q ss_pred CCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHH
Q 001769 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1016)
Q Consensus 365 ~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~ 444 (1016)
|..-+|+++++++++..+.... +. + ....|. .+....|+ +...+..-+.
T Consensus 229 -g~~~gG~iv~~~~li~~l~~~~---------------------~~-~----~~~~g~--~~~~~~A~--l~~~~l~tl~ 277 (418)
T PLN02242 229 -ADIIAGAVCGPAELVNSMMDLH---------------------HG-A----LMLLGP--TMNPKVAF--ELSERLPHLS 277 (418)
T ss_pred -CCceEEEEEcCHHHHHHHHHHh---------------------hh-h----hhccCC--CCCHHHHH--HHHcCCCcHH
Confidence 2233588888877765541000 00 0 000110 11111222 2334445566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEc
Q 001769 445 TIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1016)
Q Consensus 445 ~ia~~~~~~a~~L~~~L~~~G~~~l~ 470 (1016)
...++..+++.++++.|++++ +++.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~-~~V~ 302 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CEEE
Confidence 666788899999999999997 7775
No 229
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=4.4e-14 Score=163.43 Aligned_cols=210 Identities=17% Similarity=0.112 Sum_probs=152.6
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---hh
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DI 291 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~L 291 (1016)
.+++.++.|.|.+. +.++.+|++|+.++++++. ++||+||+++..++.+...+...++.+|+++++++.+ ++
T Consensus 68 ~Le~~la~le~~~~--~v~~sSG~aAi~~~l~all---~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l 142 (395)
T PRK05967 68 ALCKAIDALEGSAG--TILVPSGLAAVTVPFLGFL---SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGI 142 (395)
T ss_pred HHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHhc---CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHH
Confidence 45678999988665 6788889999988887763 3899999999999999887766677899999999873 46
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCc
Q 001769 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1016)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP 368 (1016)
++ ++++|++|++++| |.+|.+.||++|+++||++|++++|| +..+.+++..|-++||||++.|. |.+++ -|+=
T Consensus 143 ~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD-~t~a~p~~~~pl~~GaDivv~S~tKy~~G---h~d~ 218 (395)
T PRK05967 143 AKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD-NTWATPLYFRPLDFGVDISIHAATKYPSG---HSDI 218 (395)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE-CCccCceecChhHcCCCEEEEecccccCC---CCCe
Confidence 66 7889999999987 78999999999999999999999994 55666677789999999999999 54431 1222
Q ss_pred ceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHH
Q 001769 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1016)
Q Consensus 369 ~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~ 448 (1016)
-+|.+..++++.+++ ...++..|.. + .+. ..|+...|-+-|.-..+
T Consensus 219 ~~G~v~~~~~~~~~l-------------------------~~~~~~~G~~-~---~p~-----da~l~~rgl~Tl~lR~~ 264 (395)
T PRK05967 219 LLGTVSANEKCWPQL-------------------------LEAHGTLGLC-A---GPD-----DTYQILRGLRTMGIRLE 264 (395)
T ss_pred eEEEEEcCHHHHHHH-------------------------HHHHHHcCCC-C---CHH-----HHHHHHcCcccHHHHHH
Confidence 245555554432222 0011111210 0 111 13455666666666667
Q ss_pred HHHHHHHHHHHHHhcCCCe
Q 001769 449 RVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 449 ~~~~~a~~L~~~L~~~G~~ 467 (1016)
+..++|..+++.|++.+.+
T Consensus 265 ~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 265 HHRKSALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 7789999999999987534
No 230
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.62 E-value=1.4e-13 Score=147.38 Aligned_cols=325 Identities=16% Similarity=0.140 Sum_probs=212.5
Q ss_pred cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCC-ccEEEccchHHHHHHHHHH
Q 001769 169 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMC 247 (1016)
Q Consensus 169 ~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~-anasl~~~~Taa~eA~~~a 247 (1016)
-.+|.| |.-+|..|++++-.+.. +-..||+.|=. .+..+-+--.+.... ....+-.+|+.++|+++..
T Consensus 19 ~L~gPG--Psnl~~~V~~A~~~~~l-----gh~sPe~~qIm----~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 19 TLLGPG--PSNLSGRVQEAMSRPSL-----GHMSPEFVQIM----DEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred eeecCC--CcCCCHHHHHhhcCCcc-----ccCCHHHHHHH----HHHHHHHHHHhccCCCceEEEecCCcchHHHHHHh
Confidence 367888 66788888865543332 22356654433 333333333343322 2244557788999988765
Q ss_pred hccccCCCCEEEEcC-CCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC-CCEeEEEEEcC-CCCeeecc-
Q 001769 248 NNIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS-GDVCGVLVQYP-GTEGEVLD- 314 (1016)
Q Consensus 248 ~~~~~~~gd~Vlvs~-~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~-~~t~~V~v~~p-n~~G~i~d- 314 (1016)
+- .+||+|++-. ..+.+...-+ ++++|++|..++. +++.. +. -...+|+|++. +.+|+++|
T Consensus 88 ~l---ePgd~vLv~~~G~wg~ra~D~---~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~ 161 (385)
T KOG2862|consen 88 LL---EPGDNVLVVSTGTWGQRAADC---ARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL 161 (385)
T ss_pred hc---CCCCeEEEEEechHHHHHHHH---HHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchH
Confidence 53 2899888655 4554433323 4567888887643 34444 43 35678888775 68999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 315 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 315 l~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
++.+.++||+++++++|++ ..|+|... ...+||+|++...+ |.++.| ||++++..+++.+..+..|--+
T Consensus 162 ~~~~g~lc~k~~~lllVD~-VaSlggt~F~mDewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~--- 232 (385)
T KOG2862|consen 162 LAISGELCHKHEALLLVDT-VASLGGTEFEMDEWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTK--- 232 (385)
T ss_pred HHHHHHHhhcCCeEEEEec-hhhcCCccceehhhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCC---
Confidence 7888999999999999943 34676543 34789999988777 778776 4577898898877777443221
Q ss_pred cCCCCcceeeeccccccc------ccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001769 393 DSSGKPALRVAMQTREQH------IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqh------iRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~ 466 (1016)
.-.|.++...+-+. -|+...|..| |.++++.+|+ +.+-++||+++.+|..+++++|+..|+++|
T Consensus 233 ----~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv---~lly~Lr~AL--~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G- 302 (385)
T KOG2862|consen 233 ----PVSFYFDILRLGNFWGCDGEPRAYHHTPPV---QLLYSLRAAL--ALIAEEGLENSWRRHREMSKWLKLSLEALG- 302 (385)
T ss_pred ----ceEEEEeHHhhcchhccCCcccccccCCcH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 11233332111111 1455566666 8999999987 667789999999999999999999999998
Q ss_pred eEEcC--C-CCccEE-EEecCC---HHHHHHHHHHc-Ccee----ecccCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001769 467 VEVQG--L-PFFDTV-KVKCAD---AHAIASAAYKI-EMNL----RVVDSNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 467 ~~l~~--~-~~~~~v-~i~~~~---~~~v~~~L~~~-GI~~----~~~~~~~lris~te-~~t~edid~ll~aL~~ 529 (1016)
++... + ...+++ ++.++. ..+|+..+..+ ++.+ ....+..+||.+.- .-+.+-|+..++.|+.
T Consensus 303 Lq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~ 378 (385)
T KOG2862|consen 303 LQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKL 378 (385)
T ss_pred ccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHH
Confidence 77652 1 233332 233332 67888888876 5554 23346678998664 4567778888877753
No 231
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.62 E-value=1.4e-13 Score=164.45 Aligned_cols=294 Identities=12% Similarity=0.066 Sum_probs=179.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCC-------------CCccEEEccchHHHHHHHHHHhcccc-C------------------
Q 001769 206 AQGRLESLLNFQTMIADLTGL-------------PMSNASLLDEGTAAAEAMAMCNNIQK-G------------------ 253 (1016)
Q Consensus 206 sqG~le~i~e~q~~iA~L~G~-------------~~anasl~~~~Taa~eA~~~a~~~~~-~------------------ 253 (1016)
|...-+.-.+.-.|+++|++. +.+...+.+|||.++-..+++.|... +
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~ 203 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALK 203 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhh
Confidence 333334444555788888752 12335678888876654444332210 0
Q ss_pred ----CCCEEEEcCCCCHHHHHHHHHhhcCCCe---EEEEeCc--------hhhhc-cC----CCEeEEE--EEcC-CCCe
Q 001769 254 ----KKKTFIIASNCHPQTIDICITRADGFDI---KVVVSDL--------KDIDY-KS----GDVCGVL--VQYP-GTEG 310 (1016)
Q Consensus 254 ----~gd~Vlvs~~~Hps~~~~l~~~a~~~gi---~v~~vd~--------~~L~~-l~----~~t~~V~--v~~p-n~~G 310 (1016)
++..|++++..|.|+.+.++.+ |+ +++.++. ++|++ +. .+++.++ .+.. +.+|
T Consensus 204 ~~~~~~~~v~~S~~~H~S~~kaa~~l----glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 204 HYGYDGLAILVSERGHYSLGKAADVL----GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETG 279 (522)
T ss_pred hccCCceEEEECCCchHHHHHHHHHc----CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCC
Confidence 2357999999999998876543 44 4555443 44554 42 3444343 3344 4799
Q ss_pred eeccHHHHHHHHHhCCcEEEEEeccccccCCCCC------Cc-ccceEEEecC-ccccccCCCCCcceEEEEeeh-hhhh
Q 001769 311 EVLDYGDFIKNAHANGVKVVMATDLLALTILKPP------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKR 381 (1016)
Q Consensus 311 ~i~dl~eI~~lah~~GalviV~a~~~alg~l~~p------g~-~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~-~l~~ 381 (1016)
.++|+++|+++|+++|++++|++ +++.+.+..+ .. .+||.++.++ |++++|++ +|++++|+ ++.+
T Consensus 280 aiDpl~eIa~i~~~~g~~lHVDa-A~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~ 353 (522)
T TIGR03799 280 NIDPLDEMADIAQELGCHFHVDA-AWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMS 353 (522)
T ss_pred CcCCHHHHHHHHHHcCCeEEEEc-hhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHH
Confidence 99999999999999999999954 2232222211 22 3899999999 55777764 57888875 4545
Q ss_pred cCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHH
Q 001769 382 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 461 (1016)
Q Consensus 382 ~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L 461 (1016)
.+... ...-.. .|...+ .+.+.|-++++. ++ ++-++ +.++|.+|++++.++..++++||.+.|
T Consensus 354 ~~~~~-~~Yl~~-~~~~d~--------~~~~legsR~~~----al-~lw~a--L~~lG~~G~~~ii~~~~~la~~l~~~L 416 (522)
T TIGR03799 354 AIEHH-AEYILR-KGSKDL--------GSHTLEGSRPGM----AM-LVYAG--LHIIGRKGYELLIDQSIEKAKYFADLI 416 (522)
T ss_pred HhccC-cchhcC-CCCCcc--------ccceeecCcchH----HH-HHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44321 000000 000000 011223222222 21 23233 488899999999999999999999999
Q ss_pred hcCCCeEEcCCCCccEEEEec-CC------------------------HHHHHHHHHHcCce-eec--cc----C----C
Q 001769 462 KKLGTVEVQGLPFFDTVKVKC-AD------------------------AHAIASAAYKIEMN-LRV--VD----S----N 505 (1016)
Q Consensus 462 ~~~G~~~l~~~~~~~~v~i~~-~~------------------------~~~v~~~L~~~GI~-~~~--~~----~----~ 505 (1016)
++..+++++.++.++.|+|+. +. ...+.+++.+.|.. +.. +. . -
T Consensus 417 ~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~ 496 (522)
T TIGR03799 417 QQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTV 496 (522)
T ss_pred hhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcE
Confidence 998559999877677777763 10 23566666667764 332 11 1 3
Q ss_pred eEEEEe-ccCCCHHHHHHHHHH
Q 001769 506 TVTASF-DETTTLEDVDKLFIV 526 (1016)
Q Consensus 506 ~lris~-te~~t~edid~ll~a 526 (1016)
.+|+++ .+.+|.+||+.+++.
T Consensus 497 ~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 497 VFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEecCCCCCHHHHHHHHHH
Confidence 489998 457889999988764
No 232
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.62 E-value=4.6e-14 Score=162.61 Aligned_cols=168 Identities=18% Similarity=0.305 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCC-----------CCCCEEEEcCCCcccc----HHH
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-----------HHRNVCIIPVSAHGTN----PAT 696 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~-----------~~~~~Vlv~~saHg~~----~~~ 696 (1016)
+++.++++++++++|.+.+ +.+++|++|...+++++- ..|+ .++++|++|...+..+ ...
T Consensus 45 ~~~~~~~~~~a~~~g~~~~-~~~~g~t~al~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~ 119 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVEDA-VIVSSASAGIAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETM 119 (363)
T ss_pred HHHHHHHHHHHHhhCCCeE-EEEcCHHHHHHHHHHHHh----cCCCcchhhcccccccccceEEEECccchhcCCchHHH
Confidence 5678999999999999864 667777777765555542 2221 1345888887322222 455
Q ss_pred HHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEE-EEcC-CCCccccccHHHHHHHHHHcCcEEEEEcccccccc
Q 001769 697 AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (1016)
Q Consensus 697 a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~-i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~ 774 (1016)
+.+.|.+++++++ ++.+|+++++++|+ ++|++|+ +++| |.+|.+. |+++|+++||++|+++++|+++..
T Consensus 120 ~~~~g~~~v~v~~--~~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~~gi~vivD~a~~~--- 190 (363)
T TIGR01437 120 VRLGGGKVVEAGY--ANECSAEQLEAAIT---EKTAAILYIKSHHCVQKSML-SVEDAAQVAQEHNLPLIVDAAAEE--- 190 (363)
T ss_pred HHhcCCeEEEEcC--CCCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcC-CHHHHHHHHHHcCCeEEEECCCCC---
Confidence 6788999999986 45699999999998 8898776 5564 6678776 899999999999999999998741
Q ss_pred CcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 775 GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 775 ~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
.+..+..+|+|++++|+||+|. ||.+|+++.++++.+.+
T Consensus 191 ~~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~ 229 (363)
T TIGR01437 191 DLQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWV 229 (363)
T ss_pred chHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHH
Confidence 1223456789999999999883 55578888887665544
No 233
>PRK04311 selenocysteine synthase; Provisional
Probab=99.62 E-value=2.7e-14 Score=168.26 Aligned_cols=220 Identities=22% Similarity=0.256 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc----c--cHHHHHhCCcEEEE
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVS 706 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg----~--~~~~a~~~G~~vv~ 706 (1016)
...++++.+++++|.+.+ +.+++|+.|...+ +..+ .++++||+++..|. + .+......|+++++
T Consensus 128 r~~~~e~~lA~l~Gae~a-~vv~sgtaAl~l~---l~~l------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~ 197 (464)
T PRK04311 128 RDRALAALLCALTGAEDA-LVVNNNAAAVLLA---LNAL------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVE 197 (464)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHH---HHHh------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEE
Confidence 356889999999999864 5667787655333 3222 25679999876553 2 23345678999999
Q ss_pred EcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC---Cccc-cccHHHHHHHHHHcCcEEEEEcccc-------cc---
Q 001769 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGVY-EEGIDEICKIIHDNGGQVYMDGANM-------NA--- 772 (1016)
Q Consensus 707 v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~---~G~i-~~di~~I~~ia~~~g~lv~vDga~~-------~a--- 772 (1016)
++.+ +..++++++++|+ ++|++|+++++++ .|.. ..|+++|+++||++|+++++|++.- ++
T Consensus 198 v~~~--~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~ 272 (464)
T PRK04311 198 VGTT--NRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD 272 (464)
T ss_pred ECCC--CCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC
Confidence 8763 4578999999998 8899999999864 3432 1389999999999999999997421 11
Q ss_pred ccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhH
Q 001769 773 QVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1016)
Q Consensus 773 ~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~ 852 (1016)
.+.+..|.++|+|++++|+||+| |||.+|++++++++.+.+..+..... --.+. ..+.
T Consensus 273 ~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~r~---------lr~dk-------~~l~ 330 (464)
T PRK04311 273 EPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLKRA---------LRVDK-------LTLA 330 (464)
T ss_pred CCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhHHH---------Hhcch-------HHHH
Confidence 11123456689999999999998 56778999999887766543222110 00000 0011
Q ss_pred HHHHH--HHHH----HhChhh---HHHHHHHHHHHHHHHHHHHhcc
Q 001769 853 LPISY--TYIA----MMGSKG---LTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 853 ~~~a~--a~l~----~lG~eG---l~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+..++ .|+. ..+..+ |....+++.++|+.++++|+++
T Consensus 331 ~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~ 376 (464)
T PRK04311 331 ALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAA 376 (464)
T ss_pred HHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 11111 1111 223333 4445788888999999999874
No 234
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=1.5e-13 Score=159.73 Aligned_cols=213 Identities=20% Similarity=0.200 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~ 289 (1016)
..++++.+|++.|.+. +..+.+|++++.++++++. ++||+||++...|+++...+...++..|++++.++. +
T Consensus 63 ~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~all---~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e 137 (388)
T PRK07811 63 RTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAVL---RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLD 137 (388)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHHh---CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHH
Confidence 4467889999999986 5667888988888887762 389999999999998888777666778999998775 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +..+.+....|.++|+||+++|. |.|++|-+
T Consensus 138 ~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD-~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~-- 214 (388)
T PRK07811 138 AVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD-NTFASPYLQQPLALGADVVVHSTTKYIGGHSD-- 214 (388)
T ss_pred HHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCcEEEecCceeecCCCC--
Confidence 5655 7789999999988 67899999999999999999999994 55666655667778999999998 77753311
Q ss_pred CcceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
--+|++++++ ++.+.+.. .|..-+. +. .++ .| |+...+-+-+..
T Consensus 215 -~~gG~vv~~~~~l~~~~~~-------------------------~~~~~g~---~~-s~~---~a--~l~~~~L~tl~~ 259 (388)
T PRK07811 215 -VVGGALVTNDEELDEAFAF-------------------------LQNGAGA---VP-GPF---DA--YLTLRGLKTLAV 259 (388)
T ss_pred -cEEEEEEECCHHHHHHHHH-------------------------HHHhcCC---CC-CHH---HH--HHHHhccCcHHH
Confidence 1147777753 44333310 0000010 00 111 11 223344444556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..++..+++..+++.|++..+++
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 66667789999999999885465
No 235
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=7.4e-14 Score=161.80 Aligned_cols=212 Identities=20% Similarity=0.201 Sum_probs=154.8
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
..+++.+|++.|.+ ++.++.||++++.++++++ . ++||+|+++...|+.+...+.......|++++.+|. ++
T Consensus 56 ~~Le~~lA~leg~e--~ivvt~gg~~Ai~~~l~al-l--~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 56 GLLEQTLSELESGK--GAVVTNCGTSALNLWVSAL-L--GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-c--CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 34668999999975 5889999999999888876 2 379999999999998888776656667899988764 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.++...|-++|||++++|+ |++++|.+
T Consensus 131 l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIv-Dea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d--- 206 (388)
T PRK08861 131 LDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAV-DNTFLTPVLQKPLELGADFVIHSTTKYINGHSD--- 206 (388)
T ss_pred HHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEE-ECCccccccCCCcccCCCEEEeecceeccCCCc---
Confidence 655 7789999999998 6899999999999999999999999 456666666778889999999999 76654321
Q ss_pred cceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
--+|++.+++ ++.+.+. ..|..-|. + ..+. ..|+...|-+-|.-.
T Consensus 207 ~~gG~i~~~~~~~~~~~~-------------------------~~~~~~G~--~--~~p~-----~a~l~~rgl~Tl~lR 252 (388)
T PRK08861 207 VIGGVLITKTKEHAEELA-------------------------WWGNCIGA--T--GTPF-----DSYMTLRGIRTLGAR 252 (388)
T ss_pred ceeEEEEecHHHHHHHHH-------------------------HHHhccCC--C--CChH-----HHHHHHhcCCCHHHH
Confidence 1246776654 3332220 01111110 0 0111 124566666667767
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.+|..++|..+++.|++.+.++
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7888899999999999875453
No 236
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=6.1e-14 Score=164.66 Aligned_cols=140 Identities=24% Similarity=0.245 Sum_probs=117.3
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-ch---h
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LK---D 290 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd-~~---~ 290 (1016)
.+++.+|++.|.+. +.++.+|++|+.++++++. ++||+||++...|..+...+...+...|++++.++ .+ +
T Consensus 73 ~Le~~lA~l~g~~~--av~~sSG~aAi~~al~all---~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 73 VVEQRIAALEGGVA--ALLLASGQAAETFAILNLA---GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh---CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 57789999999886 7899999999888887763 27999999999999988777665667899999985 33 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cccc
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg 360 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+.+..|-++|+|+++.|+ |.++
T Consensus 148 l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD-~t~a~~~~~~pl~~GaDivv~S~tK~lg 219 (436)
T PRK07812 148 WRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVD-NTIATPYLIRPLEHGADIVVHSATKYLG 219 (436)
T ss_pred HHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEEecccccC
Confidence 555 7889999999987 78999999999999999999999994 45666666777889999999998 6664
No 237
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.61 E-value=1.7e-14 Score=163.78 Aligned_cols=220 Identities=17% Similarity=0.175 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH---HHHhCCcEEEEEcCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~---~a~~~G~~vv~v~~d 710 (1016)
..++++.+++++| +...+..++|+++.. ++++.+. .++++|++++..|.++.. .+.+.|++++.++.+
T Consensus 34 ~~~l~~~~a~~~g-~~~~~~~~~gt~a~~---~~~~~l~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 104 (338)
T cd06502 34 TAKLEARAAELFG-KEAALFVPSGTAANQ---LALAAHT-----QPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE 104 (338)
T ss_pred HHHHHHHHHHHhC-CCeEEEecCchHHHH---HHHHHhc-----CCCCeEEEecCcceeeecCCcHHHHcCceEEeecCC
Confidence 5578889999999 544566667766543 3444321 357899999999876432 355689999999985
Q ss_pred CCCCCCHHHHHHHHHcC----CCCEEEEEEEcCCCCcccc--ccHHHHHHHHHHcCcEEEEEccccccc---cCc-CCCC
Q 001769 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGL-TSPG 780 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~----~~~t~~v~i~~Pn~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~---~~l-~~pg 780 (1016)
. +.+|+++|+++++++ .+++++|++++||++|.+. .|+++|+++|+++|+++++|+|+.... .+. ....
T Consensus 105 ~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~ 183 (338)
T cd06502 105 N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY 183 (338)
T ss_pred C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH
Confidence 4 789999999999731 1378999999998666531 378999999999999999998753211 111 0112
Q ss_pred ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHH
Q 001769 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1016)
Q Consensus 781 ~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l 860 (1016)
..++|+++.++||+|+.| |+++++.++++.+.+...... ..++... +... +++.+
T Consensus 184 ~~~~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~---~~a~~ 238 (338)
T cd06502 184 KSGVDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRRKQ------------AGGGMRQ----SGFL---AAAGL 238 (338)
T ss_pred HhcCCEEEEeccccCCCc------cceEEECCHHHHHHHHHHHHH------------hCCChhh----HHHH---HHHHH
Confidence 357899999999999654 334566676665543210000 0011100 1122 23333
Q ss_pred HHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 861 AMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 861 ~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
..+...++.+..++...+++|+.+.|++
T Consensus 239 ~~L~~~~~~~~~~~~~~~~~~l~~~L~~ 266 (338)
T cd06502 239 AALENDLWLRRLRHDHEMARRLAEALEE 266 (338)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 3444446777788999999999999987
No 238
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=1.2e-14 Score=163.50 Aligned_cols=246 Identities=21% Similarity=0.297 Sum_probs=175.1
Q ss_pred ccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCceeeecCChHHHHHHHHHH
Q 001769 589 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMV 667 (1016)
Q Consensus 589 ~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G-~~~~~l~~~sGa~ae~a~l~a 667 (1016)
.++..||+|++++..+...+......-++ -|.. +...++.+.|+++++ ++. .|+.|||++++|++++.
T Consensus 51 iav~~lGH~hP~iv~al~~Q~~kl~h~sn--~~~~--------~~~~~la~~L~~~s~~~d~-vff~NSGaEA~EaAiKl 119 (404)
T COG4992 51 IAVNNLGHCHPALVEALKEQAEKLWHVSN--LFYN--------EPQAELAEKLVELSPFADR-VFFCNSGAEANEAALKL 119 (404)
T ss_pred eeeeccCCCCHHHHHHHHHHHHHhhhccc--ccCC--------hHHHHHHHHHHhhCccccE-EEEcCCcHHHHHHHHHH
Confidence 45678999998888777776544323222 1211 123478899999997 555 47799999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEcCCCccccHHH---------HHhCC---cEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEE
Q 001769 668 IRAYHKARGDHHRNVCIIPVSAHGTNPAT---------AAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM 735 (1016)
Q Consensus 668 ir~~~~~~g~~~~~~Vlv~~saHg~~~~~---------a~~~G---~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~ 735 (1016)
+|.|.. +.++...|....++||.-..+ .+.++ -.++.+|+ -|+++++++|+ ++|++|+
T Consensus 120 ARk~~~--~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai~---~~taAvi 189 (404)
T COG4992 120 ARKYTG--DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAID---EDTAAVI 189 (404)
T ss_pred HHHHcC--CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHhc---cCeEEEE
Confidence 999854 222334555578999843322 22121 13666777 59999999999 7999999
Q ss_pred EEcC-CCCccccc---cHHHHHHHHHHcCcEEEEEccccccccCcCCCCccC--------CcEEEeCccccccCCCCCCC
Q 001769 736 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG--------ADVCHLNLHKTFCIPHGGGG 803 (1016)
Q Consensus 736 i~~P-n~~G~i~~---di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~G--------aDi~~~s~hK~~~~phg~GG 803 (1016)
++-- ...|++.+ -++++.++|++||+++|+|-.| .|+.+.|++- +||++. -|.+ |||-
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ----tG~GRTGk~fA~e~~gV~PDI~tl--aK~L----gGG~ 259 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQ----TGLGRTGKLFAYEHYGVEPDILTL--AKAL----GGGF 259 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccc----cCCCccchHHHHHHhCCCCCEEEe--eccc----cCCc
Confidence 9974 56777762 4788999999999999999765 5666777542 798865 4777 4554
Q ss_pred CeEEEEEEcccccccC-CCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHH
Q 001769 804 PGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYM 882 (1016)
Q Consensus 804 Pg~G~i~~~~~l~~~l-pg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yl 882 (1016)
| +|.+++++.....+ || ...|+|.|+++.++.+.+.|..+-.+++- +++.+...|+
T Consensus 260 P-igA~la~~~~~~~~~~G-------------------~HgSTfGGNpLacAv~~a~l~~l~~e~ll---~~v~~~g~~~ 316 (404)
T COG4992 260 P-IGAMLATEEIASAFTPG-------------------DHGSTFGGNPLACAVALAVLEVLLEEGLL---ENVREKGEYL 316 (404)
T ss_pred c-ceeeEEchhhhhcCCCC-------------------cccCCCCcCHHHHHHHHHHHHHHcchhHH---HHHHHHHHHH
Confidence 4 66777765444432 32 12245889999999999999999988764 4677788999
Q ss_pred HHHHhc
Q 001769 883 AKRLEK 888 (1016)
Q Consensus 883 a~~L~~ 888 (1016)
.++|++
T Consensus 317 ~~~L~~ 322 (404)
T COG4992 317 LQRLRE 322 (404)
T ss_pred HHHHHH
Confidence 999987
No 239
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=1e-13 Score=160.86 Aligned_cols=212 Identities=22% Similarity=0.207 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC--chh
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD--LKD 290 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd--~~~ 290 (1016)
..++++.+|+++|.+. +.++.+|++++.++++++ . ++||+||++...|+++...++.+ +..|++++.++ +++
T Consensus 55 ~~~lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~l-l--~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~d~~~ 128 (385)
T PRK08574 55 LRPLEEALAKLEGGVD--ALAFNSGMAAISTLFFSL-L--KAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYPSTED 128 (385)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECCCHHH
Confidence 3457899999999874 778899999888877765 2 37999999999999999888764 56799888765 456
Q ss_pred hhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 291 IDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 291 L~~-l~~-~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
+++ +++ ++++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.++...|.++|+|++++|. |.|++| |
T Consensus 129 l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~GaDivv~S~sK~l~g~---~ 204 (385)
T PRK08574 129 IIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD-NTFATPLLYRPLRHGADFVVHSLTKYIAGH---N 204 (385)
T ss_pred HHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCcEEEeeCceeecCC---C
Confidence 776 776 8999999887 78999999999999999999999994 56677766666789999999998 777543 1
Q ss_pred CcceEEEEe-ehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~-~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
..-+|.+.+ ++++..++- ..|+..|+. + +++ .| |+...+-+-+..
T Consensus 205 d~~gG~vi~~~~~~~~~~~-------------------------~~~~~~g~~-~---~p~---~a--~l~l~~l~tL~~ 250 (385)
T PRK08574 205 DVVGGVAVAWSGEFLEELW-------------------------EWRRRLGTI-M---QPF---EA--YLVLRGLKTLEV 250 (385)
T ss_pred CceeEEEEECcHHHHHHHH-------------------------HHHHhcCCC-C---CHH---HH--HHHHcccCcHHH
Confidence 112364444 455443330 001111110 0 111 11 234444455666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..++..+++.++++.|++.+.++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC
Confidence 66777789999999999875443
No 240
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=6.6e-14 Score=164.40 Aligned_cols=145 Identities=22% Similarity=0.256 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-c---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L--- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd-~--- 288 (1016)
..++++.+|++.|.+ .+..+.+|++++.++++++ . ++||+||++..+|.++...+...++..|++++++| .
T Consensus 71 ~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~l-l--~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~ 145 (437)
T PRK05613 71 VEALENRIASLEGGV--HAVAFASGQAAETAAILNL-A--GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDP 145 (437)
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCH
Confidence 456789999999986 4778889988888777765 2 37999999999999997766555677899999986 3
Q ss_pred hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecCccccccC
Q 001769 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPM 363 (1016)
Q Consensus 289 ~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~k~lg~P~ 363 (1016)
+++++ ++++|++|++..+ |.+|.+.|+++|+++||++|++++|+ ..++.+.+..|.++|+|++++|++|+.+++
T Consensus 146 e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD-~t~a~g~~~~p~~~GaDivv~S~~K~l~G~ 221 (437)
T PRK05613 146 ESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVD-NTIATAALVRPLELGADVVVASLTKFYTGN 221 (437)
T ss_pred HHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEE-CCCccccccChHHhCCCEEEeeccceecCC
Confidence 44666 7888998888665 78899999999999999999999994 355667666778899999999995554333
No 241
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.61 E-value=2.9e-13 Score=158.15 Aligned_cols=342 Identities=17% Similarity=0.176 Sum_probs=214.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCc-cccccCCCCCC-CCChHHHHHHHHhCCCcccc------cCCChhHH--hhh
Q 001769 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYN-THVPPVILRNIMENPAWYTQ------YTPYQAEI--AQG 208 (1016)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~l~~la~~n~~-~~~~lG~g~y~-~~~p~~i~~~i~~~~~~~t~------ytPyq~e~--sqG 208 (1016)
..|| .+|+++..+...|.+|+.++.. +.+-.|.|--. .+.-+.+.|. ..+|+-. ..--||.. |..
T Consensus 28 ~~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~---~~~~~hgigr~~~l~~~q~ka~gss~ 102 (444)
T TIGR03531 28 RKIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARR---HYRFCHGIGRSGDLVAPQPKAAGSSL 102 (444)
T ss_pred CcCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhc---ccceecCCCCcccccccCccccCccH
Confidence 3677 6899999999999999987643 44445777422 2222222211 1112221 12346653 233
Q ss_pred HHHHHHHHHHHHHHHcCCCC-ccEEEccchHH-HHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 209 RLESLLNFQTMIADLTGLPM-SNASLLDEGTA-AAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 209 ~le~i~e~q~~iA~L~G~~~-anasl~~~~Ta-a~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
......+|+..+++++|.+. ..+.+++++|+ +...++++++..+.++++||+++..|.++.+++.. .|++++.+
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~----~G~~pv~V 178 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST----AGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH----cCCeEEEe
Confidence 56778889999999999973 24778899995 44434455543211578999999999999998754 47777776
Q ss_pred Cc-----------hhhhc-cCC---CEeEEEEEcCCCC--eeeccHHHHHHHHHhCCcEEEEEeccccccCCC------C
Q 001769 287 DL-----------KDIDY-KSG---DVCGVLVQYPGTE--GEVLDYGDFIKNAHANGVKVVMATDLLALTILK------P 343 (1016)
Q Consensus 287 d~-----------~~L~~-l~~---~t~~V~v~~pn~~--G~i~dl~eI~~lah~~GalviV~a~~~alg~l~------~ 343 (1016)
|+ ++|++ |++ ++.++++.+|+++ |.++|+++|+++|+++|++++|++ +.+++... .
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa-Ayg~~~~~~~~~~~~ 257 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN-AYGLQSNKYMELINK 257 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC-cCcCcChhhhhhhhc
Confidence 62 34555 654 5566777777655 478999999999999999999943 33332211 1
Q ss_pred CCccc-ceEEEecC-ccccccCCCCCcceEEEEe-ehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCcc
Q 001769 344 PGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1016)
Q Consensus 344 pg~~G-aDivvgs~-k~lg~P~g~GGP~~Gfl~~-~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsni 420 (1016)
..+.| +|+++++. |.|..|.+ +|++.+ ++++.+.+.. . | +. +. ++
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~-------~------y---------~g-~~---~~- 305 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISK-------S------Y---------PG-RA---SA- 305 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHH-------h------c---------cC-CC---CC-
Confidence 22354 79999998 77876532 356666 4566555410 0 0 00 11 01
Q ss_pred chhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC----CCeEEcCCC---CccEEEEec--CC-HHHHHH
Q 001769 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLP---FFDTVKVKC--AD-AHAIAS 490 (1016)
Q Consensus 421 cT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~----G~~~l~~~~---~~~~v~i~~--~~-~~~v~~ 490 (1016)
.. ...+.+.+..+|.+|++++.++..++++++.+.|+++ | -++++.+ ..--++++. +. ...+..
T Consensus 306 ---s~--~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~-~~~~~~~~n~is~~~~~~~~~~~~~~~~g~ 379 (444)
T TIGR03531 306 ---SP--SLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHG-ERLLDTPENPISSAMTLSTLKGKDPTMLGS 379 (444)
T ss_pred ---hH--HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cEeecCCCCceeEEEecccccccCHHHHHH
Confidence 11 2223333468899999999999999999999999875 4 5565432 211123321 12 778888
Q ss_pred HHHHcCcee-eccc-----------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 491 AAYKIEMNL-RVVD-----------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 491 ~L~~~GI~~-~~~~-----------------------~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.|..+++.- |.+. -..+.+......+++|||.|++.|.
T Consensus 380 ~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~ 441 (444)
T TIGR03531 380 MLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLE 441 (444)
T ss_pred HHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHh
Confidence 998887731 1110 0124444445568888988888875
No 242
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=1.1e-13 Score=161.90 Aligned_cols=143 Identities=20% Similarity=0.182 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---- 288 (1016)
..+||+.+|++.|.+. +..+.+|++|+.++++++. ++||+||++...+..+...+......+|++++++|.
T Consensus 63 v~~lE~~la~leg~~~--av~~~SG~aAi~~al~all---~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~ 137 (432)
T PRK06702 63 LAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNIC---SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTA 137 (432)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhc---CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 3457799999999876 7889999999998888762 389999999999998888876655678999999875
Q ss_pred hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001769 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 289 ~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~ 361 (1016)
+++++ ++++|++|++.+| |..|.+.|+++|+++||++|++++++ +.++.+.+..|-++||||++.|. |.+++
T Consensus 138 ~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD-~T~~tP~~~~pl~~GADIvv~S~TKy~~G 212 (432)
T PRK06702 138 DEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVD-NTLATPYLCQAFEHGANIIVHSTTKYIDG 212 (432)
T ss_pred HHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEE-CCCCchhhCChhhcCCCEEEEccccccCC
Confidence 45766 8899999999887 78999999999999999999999994 45666777788899999999998 87765
No 243
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.60 E-value=1.3e-13 Score=163.46 Aligned_cols=285 Identities=12% Similarity=-0.001 Sum_probs=177.9
Q ss_pred HHHHHHHcCCCCccEEE---ccchHHHHHHHHHHhccccCCCCEEEEcC------CCCHHHHHHHHHhhcCCCeE-----
Q 001769 217 QTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS------NCHPQTIDICITRADGFDIK----- 282 (1016)
Q Consensus 217 q~~iA~L~G~~~anasl---~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~------~~Hps~~~~l~~~a~~~gi~----- 282 (1016)
++...++++.+.+...+ ..+|+.++.++++++. +++|+|++.+ ..|.+.....+- ...++.
T Consensus 86 ~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~---~pgD~Il~~d~~~gGhl~H~~~~~g~~~--s~~~~~~~~~~ 160 (475)
T PLN03226 86 QKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL---QPHDRIMGLDLPHGGHLSHGYQTDGKKI--SATSIYFESMP 160 (475)
T ss_pred HHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC---CCCCEEEECCCCcCcchhhhhhhccccc--ccceEEEEeee
Confidence 45678888887643322 2688889999988874 3899999855 445554443221 112222
Q ss_pred EEE------eCchhhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCc----ccce
Q 001769 283 VVV------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE----LGAD 350 (1016)
Q Consensus 283 v~~------vd~~~L~~-l~-~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~----~GaD 350 (1016)
+.+ +|+++|++ +. .+++.|++.. +.+|...|+++|.++||++|++++|+ .+++.|++...+. .++|
T Consensus 161 y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~~s~~~D~a~i~~ia~~~ga~LlvD-~AH~~Gli~~~~~~~p~~~~D 238 (475)
T PLN03226 161 YRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SAYPRDWDYARMRKIADKVGALLMCD-MAHISGLVAAQEAASPFEYCD 238 (475)
T ss_pred eeecCCCCCcCHHHHHHHHhhcCCeEEEEec-CcCCCccCHHHHHHHHHHcCCEEEEE-chhhhCcccCCCCCCCCCCCe
Confidence 122 26677776 43 3566555544 45788889999999999999999993 4556665532211 2799
Q ss_pred EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHH
Q 001769 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1016)
Q Consensus 351 ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~ 429 (1016)
|+++++ |+|++| ..|++++++++++.+.+. .+...| |....+. ... ....++.+. ..+.++
T Consensus 239 iv~~t~hK~L~GP------~Gg~I~~~~~~~~~~~~g-~~~~~d------~~~~i~~-a~~-~~~~g~p~~---~~iaal 300 (475)
T PLN03226 239 VVTTTTHKSLRGP------RGGMIFFRKGPKPPKGQG-EGAVYD------YEDKINF-AVF-PGLQGGPHN---HTIAAL 300 (475)
T ss_pred EEEecCcccccCC------CceEEEEchhhcccccCC-CccHHH------HHHHhcc-ccC-CccCCCchH---HHHHHH
Confidence 999998 777544 447899988765443221 110000 1000000 000 011222332 334444
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecC--C--HHHHHHHHHHcCceeec---
Q 001769 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRV--- 501 (1016)
Q Consensus 430 ~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~--~--~~~v~~~L~~~GI~~~~--- 501 (1016)
.+++ .++-..|.+++++++++++++|++.|.+.| ++++.. ..-+.+.|.+. + ..++.+.|.+.||.+..
T Consensus 301 ~aAl--~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~ 377 (475)
T PLN03226 301 AVAL--KQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAV 377 (475)
T ss_pred HHHH--HHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCC
Confidence 4444 555567889999999999999999999987 998752 21233444442 2 67899999999997643
Q ss_pred ------ccCCeEEE----EeccCCCHHHHHHHHHHHhC
Q 001769 502 ------VDSNTVTA----SFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 502 ------~~~~~lri----s~te~~t~edid~ll~aL~~ 529 (1016)
+.+..||+ -.+...+++|++++++.|..
T Consensus 378 p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 378 PGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred CCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 23567888 34556788999999998853
No 244
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.60 E-value=3.6e-13 Score=157.23 Aligned_cols=162 Identities=24% Similarity=0.268 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|++.|.+. +.++.+|++++..++.++ . ++||+||++...|+.+...+...++..|++++.+|.+
T Consensus 67 ~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~l-l--~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 141 (403)
T PRK07503 67 LALLEQRMASLEGGEA--AVALASGMGAITATLWTL-L--RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPA 141 (403)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-c--CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHH
Confidence 3457789999999875 678889998887777665 3 3899999999999877776665567789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +.++.+....|..+|+||+++|. |.|+++ |
T Consensus 142 ~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD-~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~---g 217 (403)
T PRK07503 142 ALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD-NTYCTPYLQRPLELGADLVVHSATKYLGGH---G 217 (403)
T ss_pred HHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEccccccccCC---C
Confidence 4555 7788999999887 78999999999999999999999994 55555555556678999999998 777532 2
Q ss_pred CcceEEEEeehhhhhcC
Q 001769 367 GPHAAFLATSQEYKRMM 383 (1016)
Q Consensus 367 GP~~Gfl~~~~~l~~~l 383 (1016)
+.-+|++..++++.+++
T Consensus 218 d~~gG~v~~~~~l~~~l 234 (403)
T PRK07503 218 DITAGLVVGGKALADRI 234 (403)
T ss_pred ceeEEEEEcCHHHHHHH
Confidence 23368888777776554
No 245
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.60 E-value=1.5e-13 Score=158.55 Aligned_cols=228 Identities=18% Similarity=0.176 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|++.|.+. +.++.+|++++.+++ ++ . ++||+||+++..++.+...+...++..|++++.+|..
T Consensus 54 ~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~l-l--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 127 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SL-F--RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLK 127 (366)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HH-h--CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHH
Confidence 3557789999999987 578899998877654 33 2 2789999999999998888776677789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|+++++| +..+.+++..|.++|+||+++|. |.++++ |
T Consensus 128 ~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD-~t~~~~~~~~p~~~g~di~i~S~sK~~~g~---~ 203 (366)
T PRK08247 128 AIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD-NTFYTPVLQRPLEEGADIVIHSATKYLGGH---N 203 (366)
T ss_pred HHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCchhcCCcEEEeecceeccCC---C
Confidence 4555 7788999999998 57899999999999999999999994 55555666667778999999998 877532 1
Q ss_pred CcceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
+--+|++.++ +++.+.+. ..+.. ...|. .++ . .|+...+-+-+..
T Consensus 204 d~~~G~iv~~~~~l~~~~~-------------------------~~~~~---~g~~~-s~~---~--a~l~~~~l~tl~~ 249 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLA-------------------------YYQNA---AGAVL-SPF---D--SWLLIRGMKTLAL 249 (366)
T ss_pred ceeeeEEecChHHHHHHHH-------------------------HHHHh---cCCCC-ChH---H--HHHHHhccCcHHH
Confidence 1134677765 44443330 00000 11111 111 1 1223334445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEcCCC-CccEEEEecCC
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD 484 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~l~~~~-~~~~v~i~~~~ 484 (1016)
..++..+++..+.+.|++.+++..+..| .-..++|.+++
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC
Confidence 6667789999999999998547643222 22234555443
No 246
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.60 E-value=7.1e-14 Score=159.50 Aligned_cols=262 Identities=16% Similarity=0.064 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~- 711 (1016)
...++++.+++++|.+.. +..++|+++.+.++.+++ .+++++|+++...|.++...+...|++++.+++++
T Consensus 19 ~~~~~~~~la~~~~~~~~-~~~~sgt~al~~~l~~l~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKYA-VAVSSGTAALHLALRALG-------IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHcC-------CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCC
Confidence 355889999999998754 455677776544444331 13578999999988887777888999999999987
Q ss_pred CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCC-CCccCCcEEEeC
Q 001769 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (1016)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~-pg~~GaDi~~~s 790 (1016)
++.+|+++++++++ +++++|+++++ +|... |+++|.++|+++|+++++|+++..+...... .+.+ .|+.++|
T Consensus 91 ~~~~d~~~l~~~i~---~~~~~v~~~~~--~G~~~-~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~-~d~~~~S 163 (352)
T cd00616 91 TYNIDPELIEAAIT---PRTKAIIPVHL--YGNPA-DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTF-GDAGAFS 163 (352)
T ss_pred cCCcCHHHHHHhcC---cCCeEEEEECC--CCCcC-CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccC-cceeEEc
Confidence 68899999999997 78999999864 68886 8999999999999999999998654322111 2222 5888888
Q ss_pred cc--ccccCCCCCCCCeEEEEEEcc-cccccCCCCc-cccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 791 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHP-VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 791 ~h--K~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~-~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+| |+|+ + +.+|++++++ ++.+.+.... .+.......+ ...+.+.. ...+...+ .+.....+
T Consensus 164 ~~~~K~~~-----~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~a-----a~~~~~l~ 228 (352)
T cd00616 164 FHPTKNLT-----T-GEGGAVVTNDEELAERARLLRNHGRDRDRFKY--EHEILGYN--YRLSEIQA-----AIGLAQLE 228 (352)
T ss_pred CCCCCCCc-----c-cCceEEEECCHHHHHHHHHHHHcCCCCCCCcc--ccceeeec--cCcCHHHH-----HHHHHHHH
Confidence 66 9883 2 2246676664 4443321100 0000000000 00000000 00011211 12222345
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc--cCCccccCCC-CceeeEEEEEecCc-hhHHHHHHHHHH
Q 001769 867 GLTEASKIAILNANYMAKRLEK--HYPILFRGVN-GTVAHEFIVDLRGL-KEELDRYCDALI 924 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~-~~~~he~i~~~~~~-~~~ld~f~~~l~ 924 (1016)
++.++.++...+++++.++|.+ ++++..+..+ ....+-+.+.+++. ...-+.+.+.|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~ 290 (352)
T cd00616 229 KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALK 290 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHH
Confidence 6778888899999999999987 4565543221 12334455666531 123344454443
No 247
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=1.7e-13 Score=158.63 Aligned_cols=212 Identities=17% Similarity=0.196 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~ 289 (1016)
..++++.+|++.|.+. +.++.+|++++.+++ ++ . ++||+||+++..|+++...+...++..|++++.++. +
T Consensus 52 ~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~-~~-l--~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 125 (377)
T PRK07671 52 RAALEELIAVLEGGHA--GFAFGSGMAAITAVM-ML-F--SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLE 125 (377)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHH-HH-h--CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHH
Confidence 4567789999999876 677888888776554 32 2 279999999999998887776666778999999875 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~G 366 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +..+.+....|.++|+||+++|. |.|++|-+
T Consensus 126 ~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD-~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~-- 202 (377)
T PRK07671 126 EVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD-NTFMTPYWQSPISLGADIVLHSATKYLGGHSD-- 202 (377)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCeEEEecCcccccCCcc--
Confidence 5655 7889999999998 67899999999999999999999994 45555555566789999999998 87764421
Q ss_pred CcceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 367 GP~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
--+|++.+++ ++.+++. ..|..-| .. ..+. ..|+...|.+-+..
T Consensus 203 -~~~G~~v~~~~~l~~~~~-------------------------~~~~~~g--~~--~~~~-----~a~l~~~~l~tl~~ 247 (377)
T PRK07671 203 -VVAGLVVVNSPELAEDLH-------------------------FVQNSTG--GI--LGPQ-----DSWLLLRGLKTLGI 247 (377)
T ss_pred -ceeEEEEeCcHHHHHHHH-------------------------HHHHhhc--CC--CCHH-----HHHHHHcCcChHHH
Confidence 1246666643 4433331 0000000 00 0111 11234445555666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeE
Q 001769 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..++..+++..|.+.|++..++.
T Consensus 248 R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 248 RMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHcCCCee
Confidence 67777899999999999875453
No 248
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.60 E-value=2.2e-13 Score=155.68 Aligned_cols=143 Identities=25% Similarity=0.265 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh--
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~-- 290 (1016)
...+|+.+|+|.|.+. +..|++|.+|+.+.++++. ++||+||+++..+..+...+....+++|+++..+|..+
T Consensus 65 ~~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll---~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~ 139 (396)
T COG0626 65 RDALEEALAELEGGED--AFAFSSGMAAISTALLALL---KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDE 139 (396)
T ss_pred HHHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc---CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChH
Confidence 3457789999999887 8899999999998887764 26999999999999999999888888999999988643
Q ss_pred -hhc-cC-CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001769 291 -IDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 291 -L~~-l~-~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~ 361 (1016)
+++ +. ++|++|++..| |.+..+.||++|+++||++|++++| ++.++.+++..|-++||||++.|+ |.+++
T Consensus 140 ~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvV-DNTfatP~~q~PL~~GaDIVvhSaTKyl~G 214 (396)
T COG0626 140 ALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVV-DNTFATPVLQRPLELGADIVVHSATKYLGG 214 (396)
T ss_pred HHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEE-ECCcccccccChhhcCCCEEEEeccccccC
Confidence 333 44 58999999998 7899999999999999999988888 688999999999999999999998 77753
No 249
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=2.6e-13 Score=156.23 Aligned_cols=227 Identities=19% Similarity=0.118 Sum_probs=152.9
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE-eCchhhh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV-SDLKDID 292 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~-vd~~~L~ 292 (1016)
.++++.+|++.|.+. +.++.+|++++.+++..+ ++||+||++...+......+.......++++.+ .|+++++
T Consensus 57 ~~le~~lA~leg~~~--~v~~~sG~aAi~~~l~~l----~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~ 130 (364)
T PRK07269 57 AKLEETLAAIESADY--ALATSSGMSAIVLAFSVF----PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELI 130 (364)
T ss_pred HHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHh----CCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHH
Confidence 457789999999764 889999998888766433 279999999988877666554433344666554 3467787
Q ss_pred c-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCcc
Q 001769 293 Y-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPH 369 (1016)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~ 369 (1016)
+ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|-++|+||+++|+ |.++++ |.--
T Consensus 131 ~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD-~t~~~~~~~~pl~~gaDivv~S~tK~l~g~---~d~~ 206 (364)
T PRK07269 131 AAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD-NTFYSPIYQRPIELGADIVLHSATKYLSGH---NDVL 206 (364)
T ss_pred HhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEecCceeccCC---Cccc
Confidence 7 8889999999998 67999999999999999999999994 44555555667789999999998 777643 1111
Q ss_pred eEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHH
Q 001769 370 AAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1016)
Q Consensus 370 ~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~ 448 (1016)
+|+++++ +++.+++- ..|...| .| ..++ .| |+...|-+-|....+
T Consensus 207 gG~v~~~~~~l~~~~~-------------------------~~~~~~G---~~-~s~~---~a--~l~~~~L~tL~~r~~ 252 (364)
T PRK07269 207 AGVVVTNDLELYEKLF-------------------------YNLNTTG---AV-LSPF---DS--YLLMRGLKTLSLRME 252 (364)
T ss_pred ceEEEeCcHHHHHHHH-------------------------HHHHHhC---CC-CCHH---HH--HHHHcCCCcHHHHHH
Confidence 3666664 34433330 0000111 11 0111 11 234555566777778
Q ss_pred HHHHHHHHHHHHHhcCCCeE-EcCCCCccEEEEecCC
Q 001769 449 RVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCAD 484 (1016)
Q Consensus 449 ~~~~~a~~L~~~L~~~G~~~-l~~~~~~~~v~i~~~~ 484 (1016)
+..+++.++++.|++.+++. +..++.-..++|...+
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~ 289 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVAD 289 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECC
Confidence 88899999999999875443 3333333345665543
No 250
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=1.7e-13 Score=160.69 Aligned_cols=154 Identities=19% Similarity=0.217 Sum_probs=122.7
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hhh
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~L 291 (1016)
++++.+|++.|.+. +.++.+|++++.++++++. ++||+||++...|+.+...+.......|+++.++|. +++
T Consensus 62 ~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~---~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 62 VLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA---EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred HHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh---CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 57789999999764 7788999988888877763 278999999999988777776555667899888764 556
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCc
Q 001769 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1016)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GGP 368 (1016)
++ +++++++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++|+||+++|+ |.|+++ |..
T Consensus 137 e~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVv-D~a~a~~~~~~p~~~gaDivv~S~tK~l~G~---g~~ 212 (425)
T PRK06084 137 EALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIV-DNTVATPVLCRPFEHGADIVVHSLTKYIGGH---GTS 212 (425)
T ss_pred HHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCcccccCChhhcCCCEEEECchhccccc---ccc
Confidence 66 7788999999887 7999999999999999999999999 456677777777889999999998 777643 223
Q ss_pred ceEEEEeeh
Q 001769 369 HAAFLATSQ 377 (1016)
Q Consensus 369 ~~Gfl~~~~ 377 (1016)
-+|++..+.
T Consensus 213 ~gG~v~~~~ 221 (425)
T PRK06084 213 IGGIVVDSG 221 (425)
T ss_pred eeEEEEeCC
Confidence 345555433
No 251
>PRK06460 hypothetical protein; Provisional
Probab=99.58 E-value=5.6e-13 Score=154.33 Aligned_cols=213 Identities=21% Similarity=0.211 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh-
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~- 290 (1016)
...++++.+|++.|.+. +.++.+|++++.++++++. ++||+||++...++.+...+...++..|++++.++.++
T Consensus 46 ~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al~---~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~ 120 (376)
T PRK06460 46 TVLELTKKIVELENAEM--GVAFSSGMGAISTTALALL---KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD 120 (376)
T ss_pred cHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHh---CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH
Confidence 34567789999999976 5567888887777766652 37999999988886666666555667899999887643
Q ss_pred --hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001769 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1016)
Q Consensus 291 --L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~ 365 (1016)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|| +..+.+....+.++|+||++.|. |.|++ .
T Consensus 121 ~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD-ea~~~~~~~~~l~~~~divv~S~sK~l~G---~ 196 (376)
T PRK06460 121 NIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD-ATFSTPINQKPLELGADIVVHSASKFLAG---H 196 (376)
T ss_pred HHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCcCccccCChhhcCCCEEEeecceeccC---C
Confidence 334 4678999999998 68999999999999999999999994 44444433344567899999998 77752 2
Q ss_pred CCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHH
Q 001769 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1016)
Q Consensus 366 GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ 445 (1016)
|+.-+|+++.++++.+++.- .++. .++|. .+. ..|+...|.+-++.
T Consensus 197 ~~~~~G~~~~~~~l~~~l~~-------------------------~~~~---~g~~~-~~~-----~a~~~l~~~~~l~~ 242 (376)
T PRK06460 197 NDVIAGLAAGYGKLLNVIDQ-------------------------MRRT---LGTSL-DPH-----AAYLTLRGIKTLKI 242 (376)
T ss_pred CCceEEEEecCHHHHHHHHH-------------------------HHHh---cCCCC-CHH-----HHHHHHhchhhHHH
Confidence 22336888887776654410 0111 11221 111 12334455566777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCe
Q 001769 446 IAQRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 446 ia~~~~~~a~~L~~~L~~~G~~ 467 (1016)
..+++.+++.++++.|++.+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 8888999999999999987534
No 252
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=3e-13 Score=158.97 Aligned_cols=152 Identities=22% Similarity=0.232 Sum_probs=124.1
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~ 290 (1016)
.++++.+|++.|.+. +.++.+|++++++++.++. ++||+||++...|+.+...+...++..|++++.+|.. +
T Consensus 66 ~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~all---~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (427)
T PRK05994 66 AVLEERVAALEGGTA--ALAVASGHAAQFLVFHTLL---QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPAS 140 (427)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHh---CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 357789999999886 7789999999888877762 3799999999999998888776666789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|-++|+|+++.|+ |.+++| ||
T Consensus 141 l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~pl~~gaDivv~S~tK~lgg~---~~ 216 (427)
T PRK05994 141 FERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD-NTLASPYLIRPIEHGADIVVHSLTKFLGGH---GN 216 (427)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCcEEEEcCccccCCC---CC
Confidence 555 7888999999987 78999999999999999999999994 45666666677789999999998 666543 44
Q ss_pred cceEEEE
Q 001769 368 PHAAFLA 374 (1016)
Q Consensus 368 P~~Gfl~ 374 (1016)
+-+|++.
T Consensus 217 ~~gG~v~ 223 (427)
T PRK05994 217 SMGGIIV 223 (427)
T ss_pred cEEEEEE
Confidence 5556655
No 253
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.58 E-value=2.9e-13 Score=148.69 Aligned_cols=140 Identities=26% Similarity=0.276 Sum_probs=116.6
Q ss_pred HHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh---hh
Q 001769 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---ID 292 (1016)
Q Consensus 216 ~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~---L~ 292 (1016)
+|+.||.|.|--. +.-+.+|.||...+++.+. +.||+||.+...+..+...+....+.+||+++++|.++ ++
T Consensus 67 lE~RiAaLEGG~a--a~a~aSG~AA~~~ai~~la---~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 67 LEERIAALEGGVA--ALAVASGQAAITYAILNLA---GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred HHHHHHHhhcchh--hhhhccchHHHHHHHHHhc---cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 5579999998654 4455677777666655553 37999999999998888887766788999999998755 55
Q ss_pred c-cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001769 293 Y-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 293 ~-l~~~t~~V~v~~-pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~ 361 (1016)
+ |+++|++|++.. .|.-+.|.|++.|+++||++|++++| ++.++.+.+..|-+.|||||+.|. |++|+
T Consensus 142 ~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliV-DNT~atpyl~rP~~hGADIVvHS~TK~igG 212 (426)
T COG2873 142 AAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIV-DNTFATPYLCRPIEHGADIVVHSATKYIGG 212 (426)
T ss_pred HHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEE-ecCCCcceecchhhcCCCEEEEeecccccC
Confidence 5 899999999975 68999999999999999999999999 467777788889999999999998 77764
No 254
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.58 E-value=2.1e-13 Score=165.43 Aligned_cols=271 Identities=14% Similarity=0.121 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-- 288 (1016)
..+.+.|+..|+++|++.+.. +++|+|.++.+++++.. ++||+||+++++|.|+...+.. .|++.+++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyf-vvNGTS~~n~av~~a~~---~~Gd~VLvdRN~HKSv~~aLil----sga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYI-VTNGTSTSNKIVGMYAA---PAGSTLLIDRNCHKSLAHLLMM----SDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCChHHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeeEEecccc
Confidence 467889999999999997544 77888999999998874 3899999999999999987642 4888888643
Q ss_pred ----------------hhhhc-c--CCCE---eEEEEEcCCCCeeeccHHHHHHHHHhCCcEE-EEEecccc-c----cC
Q 001769 289 ----------------KDIDY-K--SGDV---CGVLVQYPGTEGEVLDYGDFIKNAHANGVKV-VMATDLLA-L----TI 340 (1016)
Q Consensus 289 ----------------~~L~~-l--~~~t---~~V~v~~pn~~G~i~dl~eI~~lah~~Galv-iV~a~~~a-l----g~ 340 (1016)
+.+++ + .++. +++++|+|+|+|.+.|+++|++++ |+.+ +|+ .+|. + ..
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvD-EAhgah~~F~p~ 342 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFD-SAWVPYTHFHPI 342 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEe-ccchhhhhcCcc
Confidence 22333 3 2343 689999999999999999999999 6766 473 3331 1 11
Q ss_pred CCCCCc--c--cceEE---EecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccccccc
Q 001769 341 LKPPGE--L--GADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1016)
Q Consensus 341 l~~pg~--~--GaDiv---vgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiR 412 (1016)
+++... . |+|.+ +.|. |.++. +. .+++++++.. + | |.|
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~a-lT----QaS~iHvk~~----v---------d----------------~~~ 388 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAA-FS----QASLIHIKGE----Y---------D----------------EET 388 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccc-cc----hheeeeecCC----C---------C----------------HHH
Confidence 221111 2 57888 8888 55543 22 3567776432 1 0 001
Q ss_pred ccccCCccchhhHHHHHHHHHH--HHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCC------eEEcCC-----------
Q 001769 413 RDKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGL----------- 472 (1016)
Q Consensus 413 RekaTsnicT~~~l~a~~Aa~y--~~~~g-~~Gl~~ia~~~~~~a~~L~~~L~~~G~------~~l~~~----------- 472 (1016)
.+.+=.-.-|+++.+.++|++- ..++. +.| +++.++..+++..+++.|.++++ ++++++
T Consensus 389 ~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l 467 (713)
T PRK15399 389 FNEAFMMHTSTSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPV 467 (713)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceec
Confidence 1111122335688899999883 23333 355 56778888899999999988754 455421
Q ss_pred ----C------------CccE--EEEecC-----------C--HHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHH
Q 001769 473 ----P------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVD 521 (1016)
Q Consensus 473 ----~------------~~~~--v~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid 521 (1016)
. ..|+ ++|.++ + +..+.+.|.++||.+...+...+.+.++..+|+++++
T Consensus 468 ~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~ 547 (713)
T PRK15399 468 APGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAM 547 (713)
T ss_pred CCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHH
Confidence 0 1243 445443 3 6789999999999999988899999999999999999
Q ss_pred HHHHHHh
Q 001769 522 KLFIVFA 528 (1016)
Q Consensus 522 ~ll~aL~ 528 (1016)
+|+++|.
T Consensus 548 ~L~~aL~ 554 (713)
T PRK15399 548 GLLRGLT 554 (713)
T ss_pred HHHHHHH
Confidence 9999986
No 255
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.58 E-value=8e-14 Score=157.75 Aligned_cols=228 Identities=18% Similarity=0.170 Sum_probs=157.1
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC---ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~---~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++..++++++....|.+ ...++.++|+++..+++.++. +++++|+++...|+++...++..|++
T Consensus 35 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~ 106 (350)
T cd00609 35 DPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAE 106 (350)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCE
Confidence 4577777777777777776632 223455566555533333321 25689999999999998889999999
Q ss_pred EEEEcCCCCCCCCH--HHHHHHHHcCCCCEEEEEEEcCC-CCccccccHH---HHHHHHHHcCcEEEEEcccccccc-Cc
Q 001769 704 IVSVGTDAKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEEGID---EICKIIHDNGGQVYMDGANMNAQV-GL 776 (1016)
Q Consensus 704 vv~v~~d~~g~iD~--~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~---~I~~ia~~~g~lv~vDga~~~a~~-~l 776 (1016)
++.++.++++..+. +.++..++ +++++|++++|+ .+|.+. |++ +|.++||++|+++++|+++..... +.
T Consensus 107 ~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~ 182 (350)
T cd00609 107 VVPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVL-SEEELEELAELAKKHGILIISDEAYAELVYDGE 182 (350)
T ss_pred EEEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCCc
Confidence 99999988877765 67776665 789999999985 678887 554 555899999999999998743211 11
Q ss_pred -----CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchh
Q 001769 777 -----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1016)
Q Consensus 777 -----~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a 850 (1016)
..+...+.|+++.++||+|+. +|+++|++++++ .+.+.+.... ...+.+. +.
T Consensus 183 ~~~~~~~~~~~~~~~~~~s~~K~~~~----~g~~~G~i~~~~~~~~~~~~~~~------------~~~~~~~------~~ 240 (350)
T cd00609 183 PPPALALLDAYERVIVLRSFSKTFGL----PGLRIGYLIAPPEELLERLKKLL------------PYTTSGP------ST 240 (350)
T ss_pred ccccccCcCccCcEEEEeecccccCC----cccceEEEecCHHHHHHHHHHHH------------HhcccCC------Ch
Confidence 234567789999999999852 457789999988 6665542110 0001111 11
Q ss_pred hHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
.....+..++.... ++++++.++..++++++.+.|++.
T Consensus 241 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 278 (350)
T cd00609 241 LSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKEL 278 (350)
T ss_pred HHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22223344444332 678888999999999999999974
No 256
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=5.2e-13 Score=154.95 Aligned_cols=272 Identities=15% Similarity=0.107 Sum_probs=180.3
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
..+++.+|++.|.+ .+.++.+|++++..++.++. ++||+|++++..|+++...+...+...++++..++. ++
T Consensus 55 ~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~---~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 55 DVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFL---KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHc---CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 34678999999965 48889999988887776653 379999999999998888877666666788887653 55
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ +++++++|++.+| |.+|.+.|+++|.++||++|++++|+ +..+.+....|-++|+|++++|. |+++++- +
T Consensus 130 l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD-eay~~~~~~~pl~~gaDivv~S~tK~l~G~~---d 205 (386)
T PRK08045 130 LRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 205 (386)
T ss_pred HHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCCEEEeecceeccCCC---C
Confidence 665 7788999999998 68999999999999999999999994 45555555667789999999998 7675331 1
Q ss_pred cceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
--+|++.++ +++.+.+ ++-+-...+|. .++ ..|+...|-+-|...
T Consensus 206 ~~~G~vi~~~~~~~~~l----------------------------~~~~~~~g~~~-~p~-----~~~l~~rgl~tl~~R 251 (386)
T PRK08045 206 VVAGVVIAKDPDVVTEL----------------------------AWWANNIGVTG-GAF-----DSYLLLRGLRTLVPR 251 (386)
T ss_pred ceeEEEEeCcHHHHHHH----------------------------HHHHHhcCCCC-CHH-----HHHHHHhhhccHHHH
Confidence 114666553 4443332 00000011111 111 123455555567777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE-EcCC-----CC----------c-cEEEEecCC----HHHHHHHHHHc--Cceee---
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE-VQGL-----PF----------F-DTVKVKCAD----AHAIASAAYKI--EMNLR--- 500 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~-l~~~-----~~----------~-~~v~i~~~~----~~~v~~~L~~~--GI~~~--- 500 (1016)
.++..+++..+++.|++.+.++ +..+ |. + ..|+|.+++ +.++.+.|.=- +..+.
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCc
Confidence 7888899999999999886454 2211 10 1 146666644 33454554421 21110
Q ss_pred -----c-----------------ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 501 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 501 -----~-----------------~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+ +.++.||+|++--+.++-+++|.++|.
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 381 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFR 381 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 124678999987765555667776665
No 257
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.57 E-value=2.4e-13 Score=159.38 Aligned_cols=242 Identities=21% Similarity=0.282 Sum_probs=153.3
Q ss_pred HHHHHHHH----HHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH-HHH--hCCcEE
Q 001769 632 EMFNNLGE----WLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAA--MCGMKI 704 (1016)
Q Consensus 632 e~~~el~~----~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~-~a~--~~G~~v 704 (1016)
+...++++ .+++++|.+.+.+.++||..|+++++.++- +++|+|+++...|+++-. .+. ..+..+
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~ 141 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL--------KPGDTILGMSLSHGGHLTHGAKVSLSGKWY 141 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------CCCCEEEEcCccceeeeecCCcceecccee
Confidence 33455665 999999999876778899888876666542 367899999998876311 111 122222
Q ss_pred --EEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcC-CCC
Q 001769 705 --VSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPG 780 (1016)
Q Consensus 705 --v~v~~d~-~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~-~pg 780 (1016)
+.++.+. ++.+|+++++++++. .++++|+++.+. +|... |+++|.++||++|+++++|+|+.++..+.. .++
T Consensus 142 ~~~~~~~~~~~~~~d~~~le~~l~~--~~~klVi~~~~~-~g~~~-dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~ 217 (416)
T PRK13034 142 NAVQYGVDRLTGLIDYDEVEELAKE--HKPKLIIAGFSA-YPREL-DFARFREIADEVGALLMVDMAHIAGLVAAGEHPN 217 (416)
T ss_pred eeEEcccccccCCcCHHHHHHHHhh--cCCeEEEECCCc-ccccc-CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCC
Confidence 3444443 467999999999863 367888876654 57765 999999999999999999999865543321 111
Q ss_pred c-cCCcEEEeCccccccCCCCCCCCeEEEEEEccc-ccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 781 Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 781 ~-~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~-l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
. .++|++++++||+++ ||.+|+++++++ +...+...+. .+ +.+.++ ....++.+.+
T Consensus 218 ~~~~~Di~~~s~~K~l~------g~~GG~v~~~~~~~~~~~~~~~~--------------~~-~~~~~~-~~~~aa~~~a 275 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLR------GPRGGMILTNDEEIAKKINSAVF--------------PG-LQGGPL-MHVIAAKAVA 275 (416)
T ss_pred CCCCceEEEEeCcccCC------CCCCeEEEECcHHHHHHHHhhcC--------------Cc-ccCCcc-HHHHHHHHHH
Confidence 1 258999999999995 233466766653 3222211010 00 001111 1122333344
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
.+..+.. +..++.++..+|++||+++|++ ++++..++ ...|-+.+.+..
T Consensus 276 l~~~~~~-~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~---~~t~i~~v~~~~ 325 (416)
T PRK13034 276 FGEALQP-EFKTYAKQVIANAQALAEVLKERGYDLVSGG---TDNHLLLVDLRP 325 (416)
T ss_pred HHHHhCh-hHHHHHHHHHHHHHHHHHHHHHcCCEeccCC---CCCcEEEEEcCC
Confidence 4444432 3446678999999999999986 67776421 234667777754
No 258
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.57 E-value=1.2e-13 Score=167.69 Aligned_cols=272 Identities=13% Similarity=0.115 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-- 288 (1016)
..+.+.|+..|+++|++.+.. +++|+|+++.+++++.. ++||+||+++++|.|+...+.. .|++.+++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyf-vvNGTS~~n~av~~a~~---~~Gd~VLvdRN~HKSv~haLil----sga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYM-VTNGTSTANKIVGMYSA---PAGSTVLIDRNCHKSLTHLMMM----SDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCchHHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 467889999999999997544 77888999999988874 3899999999999999987642 4788887643
Q ss_pred ----------------hhhhc-c--CCCEe---EEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccc-cc----cCC
Q 001769 289 ----------------KDIDY-K--SGDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL-AL----TIL 341 (1016)
Q Consensus 289 ----------------~~L~~-l--~~~t~---~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~-al----g~l 341 (1016)
+.+++ + .++.+ .+++|+|+|+|.+.|+++|++++|.++ ++|+ .+| ++ ..+
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvD-EAwgah~~F~p~~ 343 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFD-SAWVPYTNFSPIY 343 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEE-ccchhhhccCccc
Confidence 22333 3 23444 799999999999999999999999988 4663 333 11 222
Q ss_pred C--CCCcccc---e--EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccc
Q 001769 342 K--PPGELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1016)
Q Consensus 342 ~--~pg~~Ga---D--ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRR 413 (1016)
+ .+-..|+ | +++.|. |.++. ++ .+++++++.. + | |.|.
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~a-lT----QaS~LHvkg~----v---------d----------------~~~~ 389 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAA-FS----QASMIHVKGD----V---------N----------------EETF 389 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccc-hh----HHhHHHHcCC----C---------C----------------HHHH
Confidence 2 2223567 5 999999 55542 11 2344443221 0 1 0111
Q ss_pred cccCCccchhhHHHHHHHHHH--HHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCC------eEEcCCC-----------
Q 001769 414 DKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP----------- 473 (1016)
Q Consensus 414 ekaTsnicT~~~l~a~~Aa~y--~~~~g-~~Gl~~ia~~~~~~a~~L~~~L~~~G~------~~l~~~~----------- 473 (1016)
+.+=.-.-|+++.+.++|++- ..++. +.| +++.+++.+.+..+++.|.++.+ ++++.+.
T Consensus 390 n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~ 468 (714)
T PRK15400 390 NEAYMMHTTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLR 468 (714)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccC
Confidence 112222335688899999883 23333 345 56778888899999999988765 5554211
Q ss_pred ----------------CccE--EEEecC-----------C--HHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHH
Q 001769 474 ----------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDK 522 (1016)
Q Consensus 474 ----------------~~~~--v~i~~~-----------~--~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ 522 (1016)
..|+ ++|.++ + +..+.+.|.++||.++..+...+.+.++..+|++++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~ 548 (714)
T PRK15400 469 SDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALS 548 (714)
T ss_pred ccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHH
Confidence 1243 444442 2 67899999999999999888999999999999999999
Q ss_pred HHHHHh
Q 001769 523 LFIVFA 528 (1016)
Q Consensus 523 ll~aL~ 528 (1016)
|+++|.
T Consensus 549 L~~aL~ 554 (714)
T PRK15400 549 LLRALT 554 (714)
T ss_pred HHHHHH
Confidence 999986
No 259
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=6.2e-13 Score=155.17 Aligned_cols=212 Identities=16% Similarity=0.148 Sum_probs=150.2
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
.++++.+|++.|.+. +.++.+|++++..+++++ . ++||+|+++...|+.+...++..++..|++++.++. ++
T Consensus 63 ~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~al-l--~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 63 DLLGEALAELEGGAG--GVITATGMGAINLVLNAL-L--QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred HHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHH-h--CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346689999999754 668888888887777666 2 389999999999998887777767778999998875 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|+ |.|++|- +
T Consensus 138 l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD-~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~---~ 213 (405)
T PRK08776 138 LADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD-NTFLSPALQKPLEFGADLVLHSTTKYINGHS---D 213 (405)
T ss_pred HHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCCcccccCCcccccCCEEEecCceeecCCC---C
Confidence 655 7788999999998 78999999999999999999999994 45555555567789999999998 7776442 1
Q ss_pred cceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
-.+|.+.++ +++.+++-. .+...| ++. .++ ..++...|.+-++..
T Consensus 214 ~~~G~vv~~~~~l~~~l~~-------------------------~~~~~g---~~~-s~~-----~a~l~~~gl~tl~~r 259 (405)
T PRK08776 214 VVGGAVVARDAELHQQLVW-------------------------WANALG---LTG-SPF-----DAFLTLRGLRTLDAR 259 (405)
T ss_pred ceEEEEEeCCHHHHHHHHH-------------------------HHHhcC---CCC-CHH-----HHHHHHhhhCcHHHH
Confidence 124566553 444433300 000001 110 111 112233455566777
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++..+.+.|++.+.++
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 7888899999999999875454
No 260
>PLN02721 threonine aldolase
Probab=99.57 E-value=2.7e-13 Score=154.87 Aligned_cols=273 Identities=15% Similarity=0.106 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---- 288 (1016)
..++++.+|+++|.+. +.++.+||.++.+++.++.. .+||+|++++..|.+...... .+...|++++.++.
T Consensus 42 ~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~~--~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHCD--VRGSEVILGDNSHIHLYENGG-ISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred HHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHcc--CCCCeEEEcCccceehhcccc-hhhhcCceeEecCCCcCC
Confidence 3567889999999875 56777788776655555431 278999999999976554210 13456888877653
Q ss_pred ----hhhhc-cC-------CCEeEEEEEcC--CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCC----CCCC--
Q 001769 289 ----KDIDY-KS-------GDVCGVLVQYP--GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPG-- 345 (1016)
Q Consensus 289 ----~~L~~-l~-------~~t~~V~v~~p--n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l----~~pg-- 345 (1016)
+++++ ++ +++++|+++++ |..|.+.| +++|.++||++|++++++. ...++.. .++.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDG-ARIFNASVALGVPVHRL 195 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEc-hhhhcchhhhCCCHHHH
Confidence 44555 55 57899998764 45787765 7899999999999999943 2222211 1122
Q ss_pred cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhh
Q 001769 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1016)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~ 424 (1016)
..++|+++.++ |+|++ |.+++++.++++++.+... ... ..++.+. .
T Consensus 196 ~~~~d~~~~s~sK~l~~------~~G~~~~~~~~~~~~~~~~-----~~~-------------------~~~~~~~---~ 242 (353)
T PLN02721 196 VKAADSVSVCLSKGLGA------PVGSVIVGSKSFIRKAKRL-----RKT-------------------LGGGMRQ---V 242 (353)
T ss_pred hhhCCEEEEecccccCC------ceeeEEecCHHHHHhHHHH-----HHh-------------------cCCCeeh---h
Confidence 23789988887 77754 3335666677766543110 000 0000000 0
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEE-cCCCCccEEEEecC----C-HHHHHHHHHHcCce
Q 001769 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCA----D-AHAIASAAYKIEMN 498 (1016)
Q Consensus 425 ~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l-~~~~~~~~v~i~~~----~-~~~v~~~L~~~GI~ 498 (1016)
+..+. +++. .+ .+-++++ ++..++++++.+.|++++++++ ...+..+-+.++.+ . ..++.++|.++||.
T Consensus 243 ~~~~~-~~~~-~l--~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 317 (353)
T PLN02721 243 GVLAA-AALV-AL--QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL 317 (353)
T ss_pred HHHHH-HHHH-HH--HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE
Confidence 11111 1110 11 1112223 3335678899999999844755 33322222444443 2 67899999999999
Q ss_pred eecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 499 ~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++....+.+|++++..++++|+++++++|..
T Consensus 318 v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 318 LMPGNSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EecCCCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9887778999999999999999999999963
No 261
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.56 E-value=9.6e-14 Score=174.93 Aligned_cols=242 Identities=13% Similarity=0.115 Sum_probs=161.0
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCce--eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH---HHhCC
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG 701 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~~--~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~---a~~~G 701 (1016)
++-..+.+++.++.+++++|.+.. .+.+++|++ ++..+++..+. -+++++||++...|.++... ++..|
T Consensus 73 s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT--~alnlva~~l~----~~~gd~Iv~t~~eH~svl~~~~~a~~~G 146 (805)
T PLN02724 73 SMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT--AALKLVGETFP----WSSESHFCYTLENHNSVLGIREYALEKG 146 (805)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH--HHHHHHHHHCC----CCCCCeEEEeeccccchHHHHHHHHHcC
Confidence 455677899999999999999643 345555543 24455555431 13567899998889776544 34569
Q ss_pred cEEEEEcCC--------CCCCCCH--HHHHHHHH----c---CCCCEEEEEEEc-CCCCccccccHHHHHHHHHHc----
Q 001769 702 MKIVSVGTD--------AKGNINI--EELRKAAE----A---NRDNLSTLMVTY-PSTHGVYEEGIDEICKIIHDN---- 759 (1016)
Q Consensus 702 ~~vv~v~~d--------~~g~iD~--~~L~~~i~----~---~~~~t~~v~i~~-Pn~~G~i~~di~~I~~ia~~~---- 759 (1016)
+++++++++ .+|.+|+ ++|++.++ . ..++|++|.+++ .|.+|.+. ||+.|.++++..
T Consensus 147 ~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~-pi~~i~~~~~~~~~~~ 225 (805)
T PLN02724 147 AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKF-PLDLVKLIKDNQHSNF 225 (805)
T ss_pred CeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcC-CHHHHHHHHHhccccc
Confidence 999999987 4455654 66776642 0 124678888887 47899998 899875555432
Q ss_pred ----CcEEEEEccccccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCcccc-CCC-----
Q 001769 760 ----GGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS-TGG----- 829 (1016)
Q Consensus 760 ----g~lv~vDga~~~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~-~g~----- 829 (1016)
+++++||+||..++..+ ...++++|++++|+||+|+.| .|+|++++++++...+....+|+ +..
T Consensus 226 ~~~g~~~v~vDaaQ~~g~~pi-Dv~~~~~Dfl~~S~HK~~GgP-----~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~ 299 (805)
T PLN02724 226 SKSGRWMVLLDAAKGCGTSPP-DLSRYPADFVVVSFYKIFGYP-----TGLGALLVRRDAAKLLKKKYFGGGTVAASIAD 299 (805)
T ss_pred ccCcceEEEeehhhhcCCCCC-ChhhcCCCEEEEecceeccCC-----CCceEEEEehhhhhhhcCCccCCCceEEEecc
Confidence 35799999997666543 445789999999999998422 37899999987766555444443 110
Q ss_pred --C-CCC-----CcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 830 --I-PAP-----EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 830 --~-~~r-----e~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+ ..+ ..+.+|.++.+ ...+..|..|+..+ |+..+.++...+++|+.++|++.
T Consensus 300 ~~~~~~~~~~~~rfE~GT~n~~~-----i~~l~aal~~l~~i---g~~~I~~~~~~L~~~l~~~L~~l 359 (805)
T PLN02724 300 IDFVKRRERVEQRFEDGTISFLS-----IAALRHGFKLLNRL---TISAIAMHTWALTHYVANSLRNL 359 (805)
T ss_pred cceeeccccHHHHhcCCCcchhH-----HHHHHHHHHHHHHh---ChHHHHHHHHHHHHHHHHHHHhc
Confidence 0 000 02334444432 23344556666655 46678889999999999999863
No 262
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.55 E-value=1.3e-13 Score=139.09 Aligned_cols=161 Identities=27% Similarity=0.367 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHh--CCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccH-HHHHhCCcEEEEEcCC
Q 001769 634 FNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-ATAAMCGMKIVSVGTD 710 (1016)
Q Consensus 634 ~~el~~~laeL~--G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~-~~a~~~G~~vv~v~~d 710 (1016)
+.++++++++++ +.+.+.+.+ +|+.|...++++++ .++++|+++...|+.+. ..+...|.+++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~-~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVP-SGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeC-CcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 357899999999 555544544 66666655555543 23678999998888777 7788899999999987
Q ss_pred CCCCCCHH--HHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCc--CCCCccCCc
Q 001769 711 AKGNINIE--ELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL--TSPGYIGAD 785 (1016)
Q Consensus 711 ~~g~iD~~--~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l--~~pg~~GaD 785 (1016)
.++..+.+ .+++... .++++++++++|+ ..|... |+++|+++||++|+++++|+++....... ..+...++|
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d 149 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLV-PLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGAD 149 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEc-CHHHHHHHHHHcCCEEEEecccccccccccccccccccCC
Confidence 76544433 5544332 3789999999986 567776 89999999999999999998875333221 124567899
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEc
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~ 812 (1016)
+++.|+||+|+ +|++|++++|
T Consensus 150 ~~~~s~~K~~~------~~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNLG------GEGGGVVIVK 170 (170)
T ss_pred EEEEEcccccC------CCceEEEEeC
Confidence 99999999993 4889999875
No 263
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.55 E-value=2.3e-13 Score=157.65 Aligned_cols=227 Identities=14% Similarity=0.069 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHHHHhCCCc---eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH--HHhCCc-E
Q 001769 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGM-K 703 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~---~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~--a~~~G~-~ 703 (1016)
+.+++++.++.+++++|.+. +.+...+|+.|.++++ +.+.. .++..|++ ...|+.+... ++..|+ +
T Consensus 46 f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~---~~l~~----~~~~~vi~-~g~f~~~~~~~~~~~~g~~~ 117 (378)
T PRK03080 46 VKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMAL---WSLLG----ARRVDHLA-WESFGSKWATDVVKQLKLED 117 (378)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHH---HhcCC----CCcceEEE-eCHHHHHHHHHHHhhcCCCC
Confidence 34678899999999999853 2233446666554443 33211 12445555 4577765442 356799 9
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc-CCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY-PSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~-Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
++.++.++++.+|++++ + . ++.|.+++ .|.+|++. |+++|++ |++|++++||+++.++...+ ...
T Consensus 118 v~~~~~~~g~~~d~~~i----~---~-~~~V~~~h~~t~tG~~~-pi~~I~~--~~~g~~~vVDa~qs~G~~pi-dv~-- 183 (378)
T PRK03080 118 PRVLEADYGSLPDLSAV----D---F-DRDVVFTWNGTTTGVRV-PVARWIG--ADREGLTICDATSAAFALPL-DWS-- 183 (378)
T ss_pred ceEeccCCCCCCCHhhc----C---C-CCCEEEEecCCccceec-cchhhcc--ccCCCeEEEecccccccCCC-CHH--
Confidence 99999887778888874 3 1 34566776 46789998 8999999 89999999999987555433 222
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC--CC--------CCCCcCCCCCCccCCccchhhH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG--GI--------PAPEKSQPLGTIAAAPWGSALI 852 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g--~~--------~~re~~~~~g~i~s~~~G~a~~ 852 (1016)
.+|++++++||||+ |.||+|++++++++.+.+.....++.. .+ .....+..+.++.. ...
T Consensus 184 ~iD~~~~s~~K~l~-----~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~-----i~~ 253 (378)
T PRK03080 184 KLDVYTFSWQKVLG-----GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPS-----MLT 253 (378)
T ss_pred HCcEEEEehhhhCC-----CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCch-----HHH
Confidence 27999999999995 346899999998776554322222110 00 00001112222211 111
Q ss_pred HHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhc
Q 001769 853 LPISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 853 ~~~a~a~l~~lG~e-Gl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+....+.|..+-.+ |+..+.+++..+++++.++|++
T Consensus 254 i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~ 290 (378)
T PRK03080 254 VEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEK 290 (378)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 22223445555455 7888899999999999999987
No 264
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.55 E-value=1.6e-12 Score=150.69 Aligned_cols=212 Identities=18% Similarity=0.177 Sum_probs=148.8
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---hh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~~ 290 (1016)
.++++.+|++.|.+ ++.++.|+++++.+++.++ . ++||+|+++...|+++...+..++...++++..++. ++
T Consensus 54 ~~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~al-l--~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 54 DLLQQALAELEGGA--GAVVTNTGMSAIHLVTTAL-L--GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-c--CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 34678999999964 5889999999998888776 2 379999999999999888887766666888888764 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|-++|+|++++|. |.++++ +|
T Consensus 129 l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~pl~~gaDivv~S~sK~l~G~---~~ 204 (382)
T TIGR02080 129 LRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGH---SD 204 (382)
T ss_pred HHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeecceeccCC---CC
Confidence 655 7788999999998 68999999999999999999999994 55555555566678999999998 766432 11
Q ss_pred cceEEEEee-hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
--.|++.++ +++.+++. ..|...| +|. .++ . .|+...|-+-|...
T Consensus 205 ~~~G~i~~~~~~~~~~l~-------------------------~~~~~~g---~~~-sp~---~--a~l~lr~l~tl~~R 250 (382)
T TIGR02080 205 VIAGAVIAKDPQVAEELA-------------------------WWANNLG---VTG-GAF---D--SYLTLRGLRTLVAR 250 (382)
T ss_pred ceeEEEEeCCHHHHHHHH-------------------------HHHHccC---CCC-CHH---H--HHHHHcccchHHHH
Confidence 125676664 34433330 0001111 111 111 1 12334444445555
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE
Q 001769 447 AQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
.++..+++..+++.|++.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 5667799999999999875454
No 265
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.55 E-value=2.1e-12 Score=148.74 Aligned_cols=265 Identities=15% Similarity=0.092 Sum_probs=175.9
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----- 288 (1016)
.++++.+|+++|.+..++.+.+|++.+...++.++ . +++|+|++++..|+.+...+ +..|++++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~--~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-L--GPGDEVIYSEHGFAVYPIAA----QAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-c--CCCCEEEEecCCHHHHHHHH----HHcCCeEEEecccCCCC
Confidence 46778999999998888988888887766655554 2 37899999998887665543 346888887764
Q ss_pred --hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccccccCCCC---C----Ccccc-eEEEe
Q 001769 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKP---P----GELGA-DIVVG 354 (1016)
Q Consensus 289 --~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~--GalviV~a~~~alg~l~~---p----g~~Ga-Divvg 354 (1016)
+++++ +++++++|++.+| |.+|.+.|.++|.++++.. |++++++ +......... + .+.+- .|+++
T Consensus 143 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D-e~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 143 DLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLD-EAYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred CHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEE-CcHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 34555 6778899999888 6899999999999999875 8888884 3322111110 0 01112 35555
Q ss_pred cC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 355 s~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
|. |.||. +|...||+++++++++.+.. -+.+.++++ . +..++.
T Consensus 222 S~SK~~g~----~G~RiG~l~~~~~~~~~l~~----------------------------~~~~~~~~~-~---~~~~a~ 265 (367)
T PRK02731 222 TFSKAYGL----AGLRVGYGIAPPEIIDALNR----------------------------VRQPFNVNS-L---ALAAAV 265 (367)
T ss_pred eehHhhcC----cccceeeeeCCHHHHHHHHH----------------------------ccCCCCCCH-H---HHHHHH
Confidence 65 76653 34456999998887765510 001112221 1 112222
Q ss_pred HHHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecC---CHHHHHHHHHHcCceeeccc----CC
Q 001769 434 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA---DAHAIASAAYKIEMNLRVVD----SN 505 (1016)
Q Consensus 434 y~~~~g-~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~---~~~~v~~~L~~~GI~~~~~~----~~ 505 (1016)
.++. .+.++++.++..++.+++.+.|++.| +.+..+ ...-+.+.++ .+.++.++|.++||.++... ++
T Consensus 266 --~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 266 --AALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPS-VGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred --HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC-CceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 1222 23467777888888899999999886 766531 1122444553 27899999999999886542 46
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 001769 506 TVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 506 ~lris~te~~t~edid~ll~aL~~ 529 (1016)
.+|+|++ +.+|+++++++|+.
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHH
Confidence 8999985 78999999999863
No 266
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.54 E-value=2.8e-13 Score=156.28 Aligned_cols=313 Identities=16% Similarity=0.178 Sum_probs=182.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCC-ccc--cccCCCCCCCCChHHHHHHHH--hCCCcccccCCChhHHhhhHHHHH
Q 001769 139 MKFSKFDEGLTESQMIEHMQKLASMNK-VYK--SFIGMGYYNTHVPPVILRNIM--ENPAWYTQYTPYQAEIAQGRLESL 213 (1016)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~l~~la~~n~-~~~--~~lG~g~y~~~~p~~i~~~i~--~~~~~~t~ytPyq~e~sqG~le~i 213 (1016)
..+| .++.+..++++.+++...... .+. .|.|.-.-+.-.++.+.+.+. -|.. .+..+.+....+.-
T Consensus 10 ~~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n------~~~~~~~P~~~~~E 81 (373)
T PF00282_consen 10 EELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQN------GFTWEASPAATEIE 81 (373)
T ss_dssp CCHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-B------TTSTTTSHHHHHHH
T ss_pred cccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhccc------ccccccccccccch
Confidence 4566 467789999999987654432 222 333322211112222322221 1111 11223344455566
Q ss_pred HHHHHHHHHHcCCCC-------ccEEEccchHHHHHHHHHHhccc-------cC----CCCEEEEcCCCCHHHHHHHHHh
Q 001769 214 LNFQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQTIDICITR 275 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~-------anasl~~~~Taa~eA~~~a~~~~-------~~----~gd~Vlvs~~~Hps~~~~l~~~ 275 (1016)
.+.-.++++|+|++. ....+++|||.++...+++.|.. ++ ++-.|++++..|.|+.+.++-
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~- 160 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI- 160 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH-
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce-
Confidence 677789999999992 34678899987776555544321 01 234788999999999988654
Q ss_pred hcCCCeEEEEeCch--------hhhc-c-----CCCEe-EEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecccccc
Q 001769 276 ADGFDIKVVVSDLK--------DIDY-K-----SGDVC-GVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT 339 (1016)
Q Consensus 276 a~~~gi~v~~vd~~--------~L~~-l-----~~~t~-~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg 339 (1016)
.|+.++.|+.+ +|++ + +..+. +|+.+.+ +.+|.++|+++|+++|++++++++|++-.-+..
T Consensus 161 ---lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 161 ---LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp ---TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred ---eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccc
Confidence 47777777653 3544 3 22333 5666776 578999999999999999999999965322211
Q ss_pred CCCCC------CcccceEEEecC-ccccccCCCCCcceEEEEeehh-hh-hcC--CCceEeeeecCCCCcceeeeccccc
Q 001769 340 ILKPP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE-YK-RMM--PGRIVGVSIDSSGKPALRVAMQTRE 408 (1016)
Q Consensus 340 ~l~~p------g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~-l~-~~l--pgrivG~s~d~~g~~~~~l~lqtre 408 (1016)
++.+. +--+||-+..+. |+++.|++ +|++.+|++ .+ +.+ ....++- .+.+....+
T Consensus 238 ~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~-~~~~~~~~~-------- 303 (373)
T PF00282_consen 238 LLSPEYRHLLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGN-DDRESDESY-------- 303 (373)
T ss_dssp GGHCTTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT--S-SSS-GGG--------
T ss_pred cccccccccccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhcc-ccccccccc--------
Confidence 22111 224689999999 66777764 467777764 22 222 1111110 000000000
Q ss_pred ccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEec
Q 001769 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 482 (1016)
Q Consensus 409 qhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~ 482 (1016)
..++..+-......++..-+.+..+|.+|++++.++..+++++|++.|++.++++++.++.+..|.|+.
T Consensus 304 -----~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 304 -----DYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp -----CEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred -----ccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 111111111123334444444688999999999999999999999999999769999888787887764
No 267
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.54 E-value=2.2e-14 Score=165.05 Aligned_cols=223 Identities=22% Similarity=0.257 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
.+.|.|+.+++++|.+.+.+..|++++|+.++++++- +++++||++..+|-+.-..+.+.|.++++++...+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~--------~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC--------RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT--------TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc
Confidence 4779999999999999988888888889988888764 36889999999998887788899999999987522
Q ss_pred -----CCCCH-----HHHHHHHHcCCCCEE---EEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcC--
Q 001769 713 -----GNINI-----EELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-- 777 (1016)
Q Consensus 713 -----g~iD~-----~~L~~~i~~~~~~t~---~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~-- 777 (1016)
+.+++ +.++++|+++ ++.+ +|++++|++.|++- ||++|+++||++|..|+||.|+. ++..+.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~-p~~k~~~~vvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhG-ah~~F~~l 215 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEH-PDAKAPRLVVLTSPTYYGVCY-DIKEIAEICHKHGIPLLVDEAHG-AHFGFHPL 215 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHC-TTCHCESEEEEESS-TTSEEE--HHHHHHHHCCTECEEEEE-TT--TTGGCSGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhC-ccccCceEEEEeCCCCCeEEE-CHHHHHHHhcccCCEEEEEcccc-ccccCCCC
Confidence 35677 9999999876 4444 59999999999998 99999999999999999998873 232222
Q ss_pred --CCCccCCc-------EEEeCccccccCCCCCCCCeEEEEEEcccc-cccCCCCccccCCCCCCCCcCCCCCCccCCcc
Q 001769 778 --SPGYIGAD-------VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1016)
Q Consensus 778 --~pg~~GaD-------i~~~s~hK~~~~phg~GGPg~G~i~~~~~l-~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~ 847 (1016)
....+|+| +++.|.||+++ +--....+-++... ... ..+.. .++ .-.+|+ |
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~-----altQts~lh~~~~~~v~~---~~~~~--~l~---~~~TTS-----P- 276 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLP-----ALTQTSMLHVKGDRIVDH---ERVNE--ALS---MHQTTS-----P- 276 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSS-----S-TT-EEEEEETCCCTTH---HHHHH--HHH---HHS-SS-------
T ss_pred ccchhhccCccccccceeeeechhhccc-----ccccceEEEecCCCcccH---HHHHH--HHH---HHcCCC-----h-
Confidence 23568999 99999999984 22245677777643 110 00000 000 001111 1
Q ss_pred chhhHHHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHh
Q 001769 848 GSALILPISYTYIAMM-GSKGLTEASKIAILNANYMAKRLE 887 (1016)
Q Consensus 848 G~a~~~~~a~a~l~~l-G~eGl~~~~~~~~~nA~yla~~L~ 887 (1016)
+-.+++.--....+| +.+| +++.++.+.++.+++++|+
T Consensus 277 -SY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 277 -SYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp --HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHH
Confidence 112222222344455 5555 5568889999999999993
No 268
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.54 E-value=1.3e-12 Score=153.36 Aligned_cols=142 Identities=23% Similarity=0.216 Sum_probs=117.8
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---h
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---~ 290 (1016)
.++++.+|++.|.+. +.++++|++++.++++++. ++||+||++...|+.+...+...++..|++++.+|.+ +
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~---~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNLA---QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh---CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 467889999999864 7889999999888877663 2789999999999988888776677789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001769 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 291 L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~ 361 (1016)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|| +.++.+....|.++|+||++.|. |.|++
T Consensus 135 l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD-~t~~~~~~~~~l~~g~Divv~S~sK~l~g 207 (418)
T TIGR01326 135 FEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD-NTFATPYLCRPIDHGADIVVHSATKYIGG 207 (418)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCchhhcCCchhcCCeEEEECccccccC
Confidence 555 7788999999887 68999999999999999999999994 55566655667788999999998 77753
No 269
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.54 E-value=1.7e-13 Score=151.98 Aligned_cols=261 Identities=17% Similarity=0.173 Sum_probs=179.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHhCCCc--eeeecCChHHHHHHHHHHHHHHH---H--hcCC--CCCCEEEEcCCCccccHH
Q 001769 625 DQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYH---K--ARGD--HHRNVCIIPVSAHGTNPA 695 (1016)
Q Consensus 625 e~~qG~~e~~~el~~~laeL~G~~~--~~l~~~sGa~ae~a~l~air~~~---~--~~g~--~~~~~Vlv~~saHg~~~~ 695 (1016)
|+.++..-+.+++-..+.++.|.+. ..++..+|+-+++-+.+++| |. + .+|- -+.-.+++++.+|.+..+
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Ar-yk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k 212 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCAR-YKNFPEVKTKGMFALPPLILFTSEESHYSIKK 212 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHH-hhcCchhhhhhhhcCCcEEEEecccchhhHHH
Confidence 7788887788889999999999985 45666677766644444444 22 1 1121 122345668899999999
Q ss_pred HHHhCC---cEEEEEcCCCCCCCCHHHHHHHHHcCCCC---EEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEcc
Q 001769 696 TAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGA 768 (1016)
Q Consensus 696 ~a~~~G---~~vv~v~~d~~g~iD~~~L~~~i~~~~~~---t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga 768 (1016)
.|+++| ..++.|++|+.|.+++++||++|-+.+.+ +..|-++..+ ..|.|+ ||..|+++|++|+.|+|||+|
T Consensus 213 aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD-dL~~iadiC~k~~lWmHvDAA 291 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD-DLNGIADICEKHKLWMHVDAA 291 (510)
T ss_pred HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC-cHHHHHHHHHhcCEEEEeecc
Confidence 999988 58999999999999999999999654444 5667777765 589999 999999999999999999976
Q ss_pred ccccccCcCC-------CCccCCcEEEeCccccccCCCCCCCCeEEEEEEccc-ccccCCC---CccccCCCCCCCCcCC
Q 001769 769 NMNAQVGLTS-------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPS---HPVVSTGGIPAPEKSQ 837 (1016)
Q Consensus 769 ~~~a~~~l~~-------pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~-l~~~lpg---~~~g~~g~~~~re~~~ 837 (1016)
-. -+.+.+ .|-.-+|.+.-|.||+++.|..++ .+.++++ +....-. ...-..+. .++...
T Consensus 292 wG--GglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCs-----a~l~r~~gll~~Cn~~~A~YLFq~dK--~YdvS~ 362 (510)
T KOG0629|consen 292 WG--GGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCS-----AFLTREEGLLQRCNQMSAIYLFQQDK--FYDVSY 362 (510)
T ss_pred cc--cccccChhhHhhccCccccCceeecHHHhhcCcchhh-----HHHHHHHHHHHhhcccchhhhhccCc--eeeccc
Confidence 32 111222 255568999999999998776544 4555532 2211110 00000011 000111
Q ss_pred CCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCC
Q 001769 838 PLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGV 897 (1016)
Q Consensus 838 ~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~ 897 (1016)
.||.-. ..-|....+-+-|-..+.-|.+|+++..++++++|+|+.++|++ ++..++.+.
T Consensus 363 DTgdK~-iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~ 423 (510)
T KOG0629|consen 363 DTGDKA-IQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELE 423 (510)
T ss_pred ccccch-hhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCC
Confidence 233221 13343344556688889999999999999999999999999987 677777653
No 270
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.54 E-value=1.8e-12 Score=153.47 Aligned_cols=291 Identities=19% Similarity=0.179 Sum_probs=172.4
Q ss_pred HHHHHHHHHhccccCCCccccccccccC--CCChhh---hhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHh
Q 001769 572 ELLRYIHLLQSKELSLCHSMIPLGSCTM--KLNATT---EMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1016)
Q Consensus 572 e~~r~l~~l~~~n~~~~~~~i~LGs~t~--~~~~~~---~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~ 645 (1016)
.+....+.|.+... .++.|+++.+ ++.+.. .+....|..... -+-|.+ ++|. .++++.+++++
T Consensus 23 ~~~~~~~~l~~~g~----~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~---~~g~----~~Lreaia~~~ 91 (460)
T PRK13238 23 TREERERALAEAGY----NPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAG---SRSY----YRLEDAVKDIF 91 (460)
T ss_pred CHHHHHHHHHHcCC----CEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCC---CCCH----HHHHHHHHHHh
Confidence 33444445555543 3577888876 454433 122111111101 123444 4554 46778899999
Q ss_pred CCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC----------CCCC
Q 001769 646 GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA----------KGNI 715 (1016)
Q Consensus 646 G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~----------~g~i 715 (1016)
|.+.+ +.+++|++|+..+++++- +++| |+++++.+.++.....+.|.+++.+++++ .|.+
T Consensus 92 ~~~~v-v~t~ggt~A~~~~~~all--------~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~i 161 (460)
T PRK13238 92 GYPYT-IPTHQGRAAEQILFPVLI--------KKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNF 161 (460)
T ss_pred CCCcE-EECCCHHHHHHHHHHHhC--------CCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCc
Confidence 98865 566777777755444431 3678 88888755667777889999999999863 2569
Q ss_pred CHHHHHHHHHcCC-CCEEEEEEEcCC-CCc-ccc--ccHHHHHHHHHHcCcEEEEEcccccc--cc------Cc--CCCC
Q 001769 716 NIEELRKAAEANR-DNLSTLMVTYPS-THG-VYE--EGIDEICKIIHDNGGQVYMDGANMNA--QV------GL--TSPG 780 (1016)
Q Consensus 716 D~~~L~~~i~~~~-~~t~~v~i~~Pn-~~G-~i~--~di~~I~~ia~~~g~lv~vDga~~~a--~~------~l--~~pg 780 (1016)
|+++|+++|++++ ++|++|++++|+ .+| .+. .++++|+++|+++|++++.|+|+... .. +. ....
T Consensus 162 d~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~ 241 (460)
T PRK13238 162 DLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIK 241 (460)
T ss_pred CHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHH
Confidence 9999999998433 479999999995 455 332 36889999999999999999987431 11 10 1111
Q ss_pred c------cCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHH
Q 001769 781 Y------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1016)
Q Consensus 781 ~------~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~ 853 (1016)
+ -.+|++++|+||.+.. |.+|++++++ ++...+....+... |.+. +.|.+...
T Consensus 242 ~i~~~~~s~~D~~~~Sg~K~g~~------~~GG~i~~~d~~l~~~~~~~~~~~~------------g~~t--~~g~~~~~ 301 (460)
T PRK13238 242 EIAREMFSYADGLTMSAKKDAMV------NIGGLLCFRDEDLFTECRTLCILYE------------GFPT--YGGLAGRD 301 (460)
T ss_pred HHhhhhcccCcEEEEecccCCCC------cceeEEEcChHHHHHHhhhcccccC------------Cccc--ccCcHHHH
Confidence 1 2489999999998643 3347888884 66655432211100 1110 11222221
Q ss_pred HHHHH-HH-HHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 854 PISYT-YI-AMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 854 ~~a~a-~l-~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
..|.+ .+ ..+..+- .+..+.+.+||.+.|.+ ++++..|. |- |-+.++++.
T Consensus 302 ~~Ala~~l~e~~~~~~----~~~~~~~~~~l~~~L~~~G~~~~~p~--Gg--~~v~~d~~~ 354 (460)
T PRK13238 302 MEALAVGLYEGMDEDY----LAYRIGQVEYLGEGLEEAGVPIQTPA--GG--HAVFVDAGK 354 (460)
T ss_pred HHHHHhhHHHhhChHH----HHHHHHHHHHHHHHHHHCCCCeEccC--Cc--eEEEEEchh
Confidence 22222 22 2223332 33345567999999977 67776542 22 335566653
No 271
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.53 E-value=5.8e-13 Score=148.87 Aligned_cols=281 Identities=19% Similarity=0.148 Sum_probs=187.8
Q ss_pred HHHHHHHHHhccccCCCccccccccccCCCChhhhhc----c-cccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC
Q 001769 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMM----P-VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (1016)
Q Consensus 572 e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~----~-~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G 646 (1016)
.++-++.+|+.+.... .+||-|-+.++++.-.. - +..+.+..|++ .-|..++...+.+++++++|
T Consensus 18 ~vw~e~~~la~e~~~~----~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~------~~G~p~L~~aL~k~~se~~~ 87 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP----NPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTR------GYGLPQLRKALAKAYSEFYG 87 (420)
T ss_pred cHHHHHHHHHHhcCCC----CcccCCCCCCCCcHHHHHHHHHHhccchhccccc------cCCchHHHHHHHHHHHHHhc
Confidence 6778888888876432 23898888777652221 1 22333333443 44777888888999999887
Q ss_pred CC---ceeeecCChHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC--------CCCC
Q 001769 647 FD---SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--------AKGN 714 (1016)
Q Consensus 647 ~~---~~~l~~~sGa~-ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d--------~~g~ 714 (1016)
.. ...++.++||. +.+.+++++- +++|+|+|.++++.++-....|.|.+.+.|+.. .++.
T Consensus 88 ~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 88 GLLDPDDEVLVTAGANEAISSALLGLL--------NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred cccCCcccEEEecCchHHHHHHHHHHc--------CCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 54 23467777764 3333444332 478999999998877777789999999999876 3478
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccc---------cccccCcCCCCcc
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGAN---------MNAQVGLTSPGYI 782 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~---------~~a~~~l~~pg~~ 782 (1016)
+|.++++.+++ ++|++|++.+|+ .+|-+. +.+++|+++|++||.+++.|-+. ..... ..||.+
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~a--slPgm~ 234 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIA--SLPGMY 234 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeee--cCCchh
Confidence 99999999999 899999999995 678776 57999999999999999988652 11111 238888
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~ 862 (1016)
.--+-++|+.|+|++. |+.+|.++..+++...+.. +- ....-.+| ++.-.+...+-+.... +
T Consensus 235 ertitvgS~gKtf~~T----GWrlGW~igp~~L~~~~~~--vh----------~~~~~~~~-Tp~q~A~a~a~~~~~~-~ 296 (420)
T KOG0257|consen 235 ERTITVGSFGKTFGVT----GWRLGWAIGPKHLYSALFP--VH----------QNFVFTCP-TPIQEASAAAFALELA-C 296 (420)
T ss_pred heEEEeccccceeeee----eeeeeeeechHHhhhhHHH--Hh----------hccccccC-cHHHHHHHHHHhhhhh-c
Confidence 8889999999999654 7999999997776654311 10 01111223 2332222111111111 1
Q ss_pred hChhh---HHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 863 MGSKG---LTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 863 lG~eG---l~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
.-++| ++++.+.-.++-+.|++.|++ ++++.
T Consensus 297 ~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~ 331 (420)
T KOG0257|consen 297 LQPGGSYFITELVKEYKEKRDILAKALEELGLKVT 331 (420)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 21222 333667778889999999998 45543
No 272
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.53 E-value=1e-12 Score=152.39 Aligned_cols=287 Identities=15% Similarity=0.150 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---- 288 (1016)
..+|++.+|+++|.+. +..+.+||+++..++.++.. ++||+||++...|+++...+. ..|++++.+|+
T Consensus 35 ~~~le~~la~~~g~~~--~v~~~sgt~al~lal~al~~--~~Gd~Viv~~~~~~~~~~~~~----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQH--AIAVSSATAGMHITLMALGI--GPGDEVITPSLTWVSTLNMIV----LLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCC--CCCCEEEECCCcHHHHHHHHH----HcCCEEEEEecCCCc
Confidence 4568899999999874 77889999888887777643 379999999999999987764 35888887764
Q ss_pred -----hhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC---CCCcccceEEEecC-cc
Q 001769 289 -----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-QR 358 (1016)
Q Consensus 289 -----~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~---~pg~~GaDivvgs~-k~ 358 (1016)
+++++ ++++|++|+..++ +|...|+++|.++|+++|++++++ ...++|... ..+.+|+|+..++. |.
T Consensus 107 ~~~d~~~l~~~i~~~tkav~~~~~--~G~~~d~~~i~~~a~~~gi~vi~D-~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~ 183 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAIIPVHY--AGAPADLDAIRAIGERYGIPVIED-AAHAVGTYYKGRHIGARGTAIFSFHAIKN 183 (379)
T ss_pred CCcCHHHHHHhcccCCeEEEEeCC--CCCcCCHHHHHHHHHHcCCeEEEE-CCCccCCeECCeecCCCCCEEEeCCCCCc
Confidence 33555 7788998886664 899999999999999999999994 344555432 35778888777776 65
Q ss_pred ccccCCCCCcceEEEEee-hhhhhcCCC-ceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHH
Q 001769 359 FGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1016)
Q Consensus 359 lg~P~g~GGP~~Gfl~~~-~~l~~~lpg-rivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~ 436 (1016)
+.+ | .+|++.++ +++.+++.. +..|...+.... .......+..+.+.|+ |. -+..+.|++-
T Consensus 184 l~~-----g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~G~-n~----~~~~l~AAl~-- 246 (379)
T PRK11658 184 ITC-----A-EGGLVVTDDDELADRLRSLKFHGLGVDAFDR----QTQGRAPQAEVLTPGY-KY----NLADINAAIA-- 246 (379)
T ss_pred Ccc-----c-CceEEEECCHHHHHHHHHHHHcCCCcchhhh----hcccCCCcceeecccc-cc----CcCHHHHHHH--
Confidence 632 2 34666664 565544421 122322111000 0000011111123343 11 1224455552
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc-CC--C---CccEEEEecC----C--HHHHHHHHHHcCceeecc--
Q 001769 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--P---FFDTVKVKCA----D--AHAIASAAYKIEMNLRVV-- 502 (1016)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~-~~--~---~~~~v~i~~~----~--~~~v~~~L~~~GI~~~~~-- 502 (1016)
+...++++++.++-.++++++.+.|++++ +..+ .+ . ....+.+.++ + ..++.+.|.++||..+..
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc
Confidence 22236789999999999999999999886 3322 11 1 1123444432 2 678999999999965310
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 -----------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 -----------------------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
....|.+-++..-|++|++++++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 02345666667778888888888775
No 273
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.53 E-value=6e-13 Score=154.30 Aligned_cols=263 Identities=17% Similarity=0.115 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC-
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~- 712 (1016)
..++++.+++++|.+.+ +.+++|++|...++.++ +.+++++||+++..|..+...+...|++++.++++++
T Consensus 35 ~~~le~~la~~~g~~~~-v~~~sgt~al~lal~al-------~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQHA-IAVSSATAGMHITLMAL-------GIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHc-------CCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCc
Confidence 35788999999999854 55677776654433332 1136789999999887777777889999999999865
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-CCCCccCCcEEEeCc
Q 001769 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNL 791 (1016)
Q Consensus 713 g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~~pg~~GaDi~~~s~ 791 (1016)
+.+|+++++++++ ++|++|+..++ +|... |+++|+++|+++|+++++|+++..+.... ...+.+|.|+..++.
T Consensus 107 ~~~d~~~l~~~i~---~~tkav~~~~~--~G~~~-d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~ 180 (379)
T PRK11658 107 LMVTPEAIEAAIT---PRTKAIIPVHY--AGAPA-DLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHA 180 (379)
T ss_pred CCcCHHHHHHhcc---cCCeEEEEeCC--CCCcC-CHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCC
Confidence 4689999999998 78999987665 68886 89999999999999999999986443321 135678887777777
Q ss_pred cccccCCCCCCCCeEEEEEEc-ccccccCCC-CccccCCC-CCCC--Cc----CC-CCCCccCCccchhhHHHHHHHHHH
Q 001769 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGG-IPAP--EK----SQ-PLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 792 hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg-~~~g~~g~-~~~r--e~----~~-~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
+|.+. +| .+|+++++ +++...+.. +..|.... +... .. .. ..|. ++--+.+. +| |.
T Consensus 181 ~K~l~-----~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~---n~~~~~l~--AA---l~ 246 (379)
T PRK11658 181 IKNIT-----CA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGY---KYNLADIN--AA---IA 246 (379)
T ss_pred CCcCc-----cc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecccc---ccCcCHHH--HH---HH
Confidence 78773 22 24667665 444433211 00111000 0000 00 00 0110 00001122 22 22
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhcc-C-CccccCCC-CceeeEEEEEecCc--hhHHHHHHHHHH
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEKH-Y-PILFRGVN-GTVAHEFIVDLRGL--KEELDRYCDALI 924 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~~-~-~v~y~g~~-~~~~he~i~~~~~~--~~~ld~f~~~l~ 924 (1016)
....++|.+..++..++++++.+.|++. . .+..+... .+..|-+++.++.. ...-++|++.|+
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~ 314 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALK 314 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHH
Confidence 2334678889999999999999999873 2 22222211 12345666766431 113455666664
No 274
>PRK05939 hypothetical protein; Provisional
Probab=99.53 E-value=2.3e-12 Score=150.11 Aligned_cols=142 Identities=16% Similarity=0.187 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---h
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---~ 289 (1016)
..++++.+|+|.|.+. +.++.+|++++.++++++ . ++||+||+++..|+++...+.. ++..|++++.+|. +
T Consensus 49 ~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~al-l--~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e 122 (397)
T PRK05939 49 TAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTL-L--RAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQ 122 (397)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-c--CCCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHH
Confidence 4457789999999876 778889999888887776 3 3799999999999988877755 3567999999876 4
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~ 361 (1016)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||+++|. |.|++
T Consensus 123 ~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 123 NVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVD-NTMTSPWLFRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEE-CCcccccccCccccCCEEEEecCeecccC
Confidence 5666 7889999999887 78999999999999999999999994 34455544567789999999998 77753
No 275
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.53 E-value=4.5e-13 Score=156.76 Aligned_cols=278 Identities=14% Similarity=0.134 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--- 288 (1016)
.+.+.|+..|+++|.+.+.. +++|.|+++.++.+|.. ++||+||+++++|.|+...+-. .|...+++.+
T Consensus 71 ~i~eAqe~aA~~fgAd~tyF-vvNGTS~ank~vi~a~~---~~GD~VLvdRN~HKSi~~glil----aGa~Pvyl~p~~n 142 (557)
T COG1982 71 PIKEAQELAARVFGADHTYF-VVNGTSTANKAVINAVL---TPGDKVLVDRNCHKSIHHGLIL----AGATPVYLEPSRN 142 (557)
T ss_pred cHHHHHHHHHHHhCCCceEE-EECCccHHHHHHHHhhc---CCCCEEEecCCccHHHHHHHHH----cCCceEEecCCCC
Confidence 57889999999999997644 67888889999999874 3899999999999999998532 3666666432
Q ss_pred -----------hhhhc--c-CCCE-eEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEecccc-----ccCCCC-CCcc
Q 001769 289 -----------KDIDY--K-SGDV-CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA-----LTILKP-PGEL 347 (1016)
Q Consensus 289 -----------~~L~~--l-~~~t-~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~a-----lg~l~~-pg~~ 347 (1016)
+.+++ + .++. +++++++|+++|++.++++|.+.+|..++++.+ ++++. .+.+.. ..+.
T Consensus 143 p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~-deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 143 PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLY-DEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred ccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEh-hhcCcccccccccCcchhhhc
Confidence 33433 2 3456 899999999999999999999999999999999 23322 122222 2347
Q ss_pred cceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHH
Q 001769 348 GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1016)
Q Consensus 348 GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~ 427 (1016)
|+|+++.|.+|...-+. .+.++++++. +.+. .++ =+.+|.+ .-|+++.+
T Consensus 222 ~~~~~tqS~HK~l~alS----QaS~iHv~~~--~~~~-------~~r-~nea~~~-----------------h~STSPsY 270 (557)
T COG1982 222 GADFVTQSTHKLLAALS----QASMIHVKDG--RAVN-------HER-FNEALMM-----------------HQSTSPSY 270 (557)
T ss_pred CceEEEechhhhhhhhh----hhHHHhhCCC--ccCC-------HHH-HHHHHHH-----------------HccCCchH
Confidence 99999999955432222 3456666543 1111 000 0011111 12446777
Q ss_pred HHHHHHH--HHHhCcccHHH---HHHHHHHHHHHHHHHHhcCCCeEEcCCC-------------------CccE--EEEe
Q 001769 428 ANMAAMY--AVYHGPEGLKT---IAQRVHGLAGTFALGLKKLGTVEVQGLP-------------------FFDT--VKVK 481 (1016)
Q Consensus 428 a~~Aa~y--~~~~g~~Gl~~---ia~~~~~~a~~L~~~L~~~G~~~l~~~~-------------------~~~~--v~i~ 481 (1016)
.++|++- ..+.+..|.+- ..+...+..+++++..+++++|.++.+. .+|+ +++.
T Consensus 271 ~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~ 350 (557)
T COG1982 271 PLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTIT 350 (557)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEe
Confidence 7888773 23445555332 2455567777777777777657776432 1243 5566
Q ss_pred cCC----HHHHHHHHHHcCceeecccCC--eEEEEeccCCCHHHHHHHHHHHhC
Q 001769 482 CAD----AHAIASAAYKIEMNLRVVDSN--TVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 482 ~~~----~~~v~~~L~~~GI~~~~~~~~--~lris~te~~t~edid~ll~aL~~ 529 (1016)
+++ +..+.+.|+++||......+. .+.+++.+..+..+++.|++.+..
T Consensus 351 tp~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 351 TPEFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKRR 404 (557)
T ss_pred cCCCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHHh
Confidence 543 889999999999988766543 455566666788888888888863
No 276
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.52 E-value=8.6e-13 Score=149.12 Aligned_cols=161 Identities=22% Similarity=0.201 Sum_probs=131.3
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY 293 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~ 293 (1016)
..+|+.+++|.|.+. +.++++|.+|+.+++..+. ..+++||..+.++..+...++.....+|++...+|+++++.
T Consensus 80 ~~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~---~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~ 154 (409)
T KOG0053|consen 80 DVLESGIAALEGAAH--ALLFSSGMAAITVALLHLL---PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKK 154 (409)
T ss_pred HHHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc---CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHH
Confidence 346689999999886 7889999988888777664 37899999999999999999888889999999999877654
Q ss_pred ----cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 294 ----KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 294 ----l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
++++|.+|++..| |.+..+.||++|+++||++|++++| ++.++-++...|-.+|||||+.|+ |.|++--..
T Consensus 155 ~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvV-DnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdv-- 231 (409)
T KOG0053|consen 155 ILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVV-DNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDV-- 231 (409)
T ss_pred HHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEE-eCCcCcccccChhhcCCCEEEEeeeeeecCCcce--
Confidence 6788999999998 8999999999999999999999999 466776777889999999999998 887642111
Q ss_pred cceEEEEee-hhhhhcC
Q 001769 368 PHAAFLATS-QEYKRMM 383 (1016)
Q Consensus 368 P~~Gfl~~~-~~l~~~l 383 (1016)
-+|.++++ +++.+++
T Consensus 232 -i~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 232 -IGGSVVLNSEELASRL 247 (409)
T ss_pred -eeeEEecCcHHHHHHH
Confidence 12555554 4554443
No 277
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.52 E-value=7.3e-13 Score=150.89 Aligned_cols=220 Identities=18% Similarity=0.177 Sum_probs=148.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEc
Q 001769 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~ 708 (1016)
|......++++.+++++|.+. .+.+++|++++++++.++. +++++|++++..|+.+...+...|.+++.++
T Consensus 43 ~~~~~~~~l~~~la~~~~~~~-~iv~~sg~~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~ 113 (349)
T cd06454 43 GTSDLHEELEEELAEFHGKEA-ALVFSSGYAANDGVLSTLA--------GKGDLIISDSLNHASIIDGIRLSGAKKRIFK 113 (349)
T ss_pred CCchHHHHHHHHHHHHhCCCC-EEEeccHHHHHHHHHHHhc--------CCCCEEEEehhhhHHHHHHHHHcCCceEEec
Confidence 334456688899999999875 4667788776654443332 3578999999888877777788899998886
Q ss_pred CCCCCCCCHHHHHHHHHcCC--CCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-------CC
Q 001769 709 TDAKGNINIEELRKAAEANR--DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-------TS 778 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~--~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-------~~ 778 (1016)
. .|++++++++++.. +++++|++++| |.+|.+. |+++|+++|+++|+++++|+++..+..+. ..
T Consensus 114 ~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~ 187 (349)
T cd06454 114 H-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFG 187 (349)
T ss_pred C-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhc
Confidence 4 68899999997431 46788888887 4689987 89999999999999999999875332211 11
Q ss_pred CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 779 pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
....+.|+++.|+||+|+. +| |+++.++++.+.+...... ....+.. +...++.+.+
T Consensus 188 ~~~~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~~a~~~ 244 (349)
T cd06454 188 GLTDDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYARG----------FIFSTSL------PPAVAAAALA 244 (349)
T ss_pred cccccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhchh----------hhccCCC------CHHHHHHHHH
Confidence 2356889999999999953 33 6777776654432110000 0000111 1122233344
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.+..+-. +..+.++...+++++.+.|++
T Consensus 245 ~l~~~~~--~~~~~~~~~~~~~~l~~~l~~ 272 (349)
T cd06454 245 ALEVLQG--GPERRERLQENVRYLRRGLKE 272 (349)
T ss_pred HHHHHhc--CHHHHHHHHHHHHHHHHHHHh
Confidence 4444422 355678888999999999987
No 278
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.52 E-value=1.6e-12 Score=150.37 Aligned_cols=276 Identities=12% Similarity=0.117 Sum_probs=171.2
Q ss_pred HHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCc
Q 001769 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITG--FDS 649 (1016)
Q Consensus 573 ~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G--~~~ 649 (1016)
.++.+..++..+ ..++.|+.+.+.+++.......-.....+ .+-|.+ .+|..++...+.+++.+.+| .+.
T Consensus 12 ~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~la~~~~~~~~~~~~~ 84 (382)
T PRK06108 12 GIREVANAGRGR----EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTH---NLGIPELREALARYVSRLHGVATPP 84 (382)
T ss_pred HHHHHHHHHhcc----CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCcCc
Confidence 445555554332 24678888887776432222110000000 112333 57888888888888888888 443
Q ss_pred eeeecC-ChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC---CCCCHHHHHHHHH
Q 001769 650 FSLQPN-AGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK---GNINIEELRKAAE 725 (1016)
Q Consensus 650 ~~l~~~-sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~---g~iD~~~L~~~i~ 725 (1016)
..+..+ +|++|. .++++.+. ++++.|+++++.|..+...+...|++++.++.+.+ +.+|+++++++++
T Consensus 85 ~~i~~t~g~~~al---~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~ 156 (382)
T PRK06108 85 ERIAVTSSGVQAL---MLAAQALV-----GPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT 156 (382)
T ss_pred ceEEEeCChHHHH---HHHHHHhc-----CCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC
Confidence 444444 444443 33333321 35688999999888888888899999999999743 4689999999987
Q ss_pred cCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccccC--cCCCC------ccCCcEEEeCcccc
Q 001769 726 ANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG--LTSPG------YIGADVCHLNLHKT 794 (1016)
Q Consensus 726 ~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~--l~~pg------~~GaDi~~~s~hK~ 794 (1016)
+++++|++++|+ .+|.+. .++++|+++|+++|+++++|.++...... -..|. ...-.+++.|++|+
T Consensus 157 ---~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 233 (382)
T PRK06108 157 ---PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKN 233 (382)
T ss_pred ---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhh
Confidence 689999999994 678765 25789999999999999999775311100 00010 11234778899999
Q ss_pred ccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHH
Q 001769 795 FCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKI 874 (1016)
Q Consensus 795 ~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~ 874 (1016)
|+.| |.++|++++++++...+.... ......+ +.....++..+|. .+.+-+++..++
T Consensus 234 ~g~~----G~RiG~~~~~~~~~~~~~~~~------------~~~~~~~------~~~~q~a~~~~l~-~~~~~~~~~~~~ 290 (382)
T PRK06108 234 WAMT----GWRLGWLVAPPALGQVLEKLI------------EYNTSCV------AQFVQRAAVAALD-EGEDFVAELVAR 290 (382)
T ss_pred ccCc----ccceeeeeCCHHHHHHHHHHH------------HhcccCC------ChHHHHHHHHHHh-CChHHHHHHHHH
Confidence 8543 567999999877655432100 0001111 1122222333333 344456777777
Q ss_pred HHHHHHHHHHHHhcc
Q 001769 875 AILNANYMAKRLEKH 889 (1016)
Q Consensus 875 ~~~nA~yla~~L~~~ 889 (1016)
...+..++.+.|++.
T Consensus 291 ~~~~~~~l~~~L~~~ 305 (382)
T PRK06108 291 LRRSRDHLVDALRAL 305 (382)
T ss_pred HHHHHHHHHHHHHhC
Confidence 788888899988763
No 279
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.52 E-value=7.9e-13 Score=155.75 Aligned_cols=332 Identities=15% Similarity=0.124 Sum_probs=196.2
Q ss_pred CCHHHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccc-cccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHh
Q 001769 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVT-WPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1016)
Q Consensus 568 ~sE~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~-~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~ 645 (1016)
+.|.++.+.+-.|.+.-..+++++.+|+-|.++++......... ...... ...+ ....|. ...++++.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~---~~~~G~--~~~~fe~~lA~~~ 76 (438)
T PRK15407 2 MTEEELRQQILELVREYAELAHAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDF---WLTTGR--FNDAFEKKLAEFL 76 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCCHHHHHHHHHHHHhC---cccCCh--hHHHHHHHHHHHh
Confidence 46777777777777766556666667776666554322111100 000000 0000 001121 2458899999999
Q ss_pred CCCceeeecCChHHHHHHHHHHHHHH-HHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHH
Q 001769 646 GFDSFSLQPNAGAAGEYAGLMVIRAY-HKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKA 723 (1016)
Q Consensus 646 G~~~~~l~~~sGa~ae~a~l~air~~-~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~g~iD~~~L~~~ 723 (1016)
|.+. .+.++||++|...++.++... ....+.+++++||++...|......+...|++++.++++. ++.+|+++++++
T Consensus 77 g~~~-~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~ 155 (438)
T PRK15407 77 GVRY-ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAA 155 (438)
T ss_pred CCCe-EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHH
Confidence 9886 466788887765555544210 0111234678999999988777777778999999999974 688999999999
Q ss_pred HHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-CCCCccCCcEEEeCccccccCCCCCC
Q 001769 724 AEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNLHKTFCIPHGGG 802 (1016)
Q Consensus 724 i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~~pg~~GaDi~~~s~hK~~~~phg~G 802 (1016)
++ ++|++|+++++ +|... |+++|.++|+++|++|++|+++.++...- ...|.+| |+.++|+|..=.++ .
T Consensus 156 i~---~~tkaVi~~~~--~G~p~-dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~---~ 225 (438)
T PRK15407 156 VS---PKTKAIMIAHT--LGNPF-DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHIT---M 225 (438)
T ss_pred cC---cCCeEEEEeCC--CCChh-hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCcc---c
Confidence 98 88999999875 46665 89999999999999999999986543322 2356676 99999887543222 2
Q ss_pred CCeEEEEEEccc-ccccCCCC-ccccC-------------------CCC-CCCCcC---CCCCCccCCccchhhHHHHHH
Q 001769 803 GPGMGPIGVKKH-LAPFLPSH-PVVST-------------------GGI-PAPEKS---QPLGTIAAAPWGSALILPISY 857 (1016)
Q Consensus 803 GPg~G~i~~~~~-l~~~lpg~-~~g~~-------------------g~~-~~re~~---~~~g~i~s~~~G~a~~~~~a~ 857 (1016)
|.| |+++++++ +...+... ..|.. +.+ +..+.. ...| .+.--+-+.++++.
T Consensus 226 geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G---~n~rmsel~AAig~ 301 (438)
T PRK15407 226 GEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLG---YNLKITDMQAAIGL 301 (438)
T ss_pred cCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccc---cccCccHHHHHHHH
Confidence 334 88888853 33221100 00100 000 000000 0011 00000122233233
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhccCC-ccccCC---CCceeeEEEEEecCc-hhHHHHHHHHHH
Q 001769 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRGV---NGTVAHEFIVDLRGL-KEELDRYCDALI 924 (1016)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~~~-v~y~g~---~~~~~he~i~~~~~~-~~~ld~f~~~l~ 924 (1016)
.- .+.|.+..++-.+++.++.+.|.+... +..+.. ..+..|-|.+.++.. ...-|+|++.|+
T Consensus 302 ~q-----L~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~ 368 (438)
T PRK15407 302 AQ-----LEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLE 368 (438)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHH
Confidence 33 345677788889999999999986321 222211 124556777777532 123567777775
No 280
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.52 E-value=4.8e-13 Score=152.74 Aligned_cols=216 Identities=17% Similarity=0.181 Sum_probs=147.7
Q ss_pred HHHHHHHHHHhCCCceeeecCChHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~-ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g 713 (1016)
.++++.+++++|++...+..++|++ +.. ++++.+. +++++|++++..|+.+...+...|++++.++++++|
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~---~~~~~l~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIE---LLIRAFL-----EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 3788899999998755555555553 332 3333321 256899999887766666678899999999998889
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHc--CcEEEEEccccccccCcCCC----CccCCcE
Q 001769 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP----GYIGADV 786 (1016)
Q Consensus 714 ~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~--g~lv~vDga~~~a~~~l~~p----g~~GaDi 786 (1016)
.+|+++++++++ +++++|++++|+ .+|.+. +++++.++++.+ |+++++|.++. .+..-..+ ....-++
T Consensus 129 ~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 129 QLDLEDILVAID---DKPKLVFLCSPNNPTGNLL-SRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEE
Confidence 999999999886 789999999985 689987 899999999887 99999998753 11110011 1122346
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
++.|++|+|+.| |+++|++++++++.+.+.... ...++ +......+.+++...+
T Consensus 204 ~~~S~sK~~g~~----G~r~G~~~~~~~~~~~~~~~~--------------~~~~~------~~~~~~~~~~~l~~~~-- 257 (346)
T TIGR01141 204 VLRTLSKAFGLA----GLRIGYAIANAEIIDALNKVR--------------APFNL------SRLAQAAAIAALRDDD-- 257 (346)
T ss_pred EEehhhHhhhch----hhhceeeecCHHHHHHHHhcc--------------CCCCC------CHHHHHHHHHHhCCHH--
Confidence 678999999533 567999999877665542110 00111 1122333344444332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 001769 867 GLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
.+++..++..++..++.+.|++.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 46777788888899999999863
No 281
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.52 E-value=1e-13 Score=155.18 Aligned_cols=153 Identities=18% Similarity=0.262 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC----
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---- 287 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd---- 287 (1016)
.+.++|+.+|+++|++.+ ..+++|+|.++.++++++. +++|+|++++.+|+++...+.. .|+++++++
T Consensus 60 ~i~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~---~~gd~Vlv~~~~h~s~~~~~~~----~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVC---GPGDKILIDRNCHKSVINGLVL----SGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcC---CCCCEEEEeCCchHHHHHHHHH----CCCEEEEecCccC
Confidence 577889999999998752 2247888888888888763 3799999999999999988753 466666553
Q ss_pred ----------chhhhc-c--CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccc-----cCCC-CCCccc
Q 001769 288 ----------LKDIDY-K--SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TILK-PPGELG 348 (1016)
Q Consensus 288 ----------~~~L~~-l--~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~al-----g~l~-~pg~~G 348 (1016)
++++++ + ++++++|++++||++|.+.|+++|+++||++|++++|+ +.++. +.+. ...++|
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livD-eA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVD-EAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEE-CcchhhhccCcccCcchhhcC
Confidence 234555 4 35789999999999999999999999999999999994 33321 1111 224579
Q ss_pred ceEEEecC-ccccccCCCCCcceEEEEeehh
Q 001769 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 378 (1016)
Q Consensus 349 aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~ 378 (1016)
+|++++|+ |++++|. ++|+++++++
T Consensus 211 ~div~~S~hK~l~g~~-----~~~~l~~~~~ 236 (294)
T cd00615 211 ADIVVQSTHKTLPALT-----QGSMIHVKGD 236 (294)
T ss_pred CcEEEEchhcccchHh-----HHHHHHhCCC
Confidence 99999999 6664321 3466666543
No 282
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.52 E-value=3.7e-12 Score=143.65 Aligned_cols=352 Identities=15% Similarity=0.202 Sum_probs=223.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCccc--cccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHH
Q 001769 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 216 (1016)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~l~~la~~n~~~~--~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~ 216 (1016)
..|| ..+++..++++.+.+...-+-.+. -..|..++. -|... .+.. +-+.-|+|-.+.+.++.-+.-.+.
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~--~~~~~--~l~~--~~~~k~N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG--EPELD--KLIM--EAYNKFNPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC--Ccchh--hHHH--HHHhhcCccCccccchhHHHHHHH
Confidence 3577 589999999999987765543322 123444433 22222 1211 012334677777888888888888
Q ss_pred HHHHHHHcCCCCc-cEEEccchHHHHHHHHHHhcccc-C----CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch-
Q 001769 217 QTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQK-G----KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (1016)
Q Consensus 217 q~~iA~L~G~~~a-nasl~~~~Taa~eA~~~a~~~~~-~----~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~- 289 (1016)
-.|+|.|++.+.+ ....+.|+|.++.++..+.+..+ . ....|+++.++|.+ |+.+++.++++++.++++
T Consensus 126 Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a----~eK~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 126 VNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA----FEKAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH----HHHHHhhEEEEEEeeeccc
Confidence 8999999998753 34456677755443333322111 1 12346666555544 455567789999998765
Q ss_pred -----h---hhc-cCCCEeEEEEEcCC-CCeeeccHHHHHHHHHh-CCcEEEEEeccccccC---CCCCCcccc-----e
Q 001769 290 -----D---IDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTI---LKPPGELGA-----D 350 (1016)
Q Consensus 290 -----~---L~~-l~~~t~~V~v~~pn-~~G~i~dl~eI~~lah~-~GalviV~a~~~alg~---l~~pg~~Ga-----D 350 (1016)
| +.+ ++++|++|+...|| .+|.++|+++|.++.-+ ++..++|++.+-++-. ...+.+||+ -
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 2 233 78999999999997 58999999999999999 9999999553322211 112234442 2
Q ss_pred EEEecCccccccCCCCCcceE-EEEeehhhhhcCCCceEeeeecCCCCc--ceeeecccccccccccccCCccchhhHHH
Q 001769 351 IVVGSAQRFGVPMGYGGPHAA-FLATSQEYKRMMPGRIVGVSIDSSGKP--ALRVAMQTREQHIRRDKATSNICTAQALL 427 (1016)
Q Consensus 351 ivvgs~k~lg~P~g~GGP~~G-fl~~~~~l~~~lpgrivG~s~d~~g~~--~~~l~lqtreqhiRRekaTsnicT~~~l~ 427 (1016)
-.-.+++++|.-+ +|.+ .++..++++ |-.++- ..|-.|.- .+.+.. -++-++
T Consensus 282 Sisa~~HKYGl~~----~G~~~vl~r~k~~~---~~q~~~-~~~w~Gg~y~s~Tlng---------SR~g~~-------- 336 (491)
T KOG1383|consen 282 SISADGHKYGLAP----AGSSWVLYRNKELL---PHQLFF-HTDWLGGIYASPTLNG---------SRPGSQ-------- 336 (491)
T ss_pred eEeeccceeeeee----cCcEEEEEcccccc---cceEEE-eccccCccccCccccc---------CCcccH--------
Confidence 2334457776522 2333 444444432 222221 12222221 122322 122222
Q ss_pred HHHHHHH--HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeecc-
Q 001769 428 ANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV- 502 (1016)
Q Consensus 428 a~~Aa~y--~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~- 502 (1016)
.++.| +..+|.+|+++..++|.+++++|+++|++++++.++++|...-+.+.... -.++.+.|.++||++..+
T Consensus 337 --va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq 414 (491)
T KOG1383|consen 337 --VAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQ 414 (491)
T ss_pred --HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccC
Confidence 23333 57899999999999999999999999999966999877644323333333 679999999999999876
Q ss_pred cCCeEEEEeccCCCHHHH-HHHHHHHhC
Q 001769 503 DSNTVTASFDETTTLEDV-DKLFIVFAG 529 (1016)
Q Consensus 503 ~~~~lris~te~~t~edi-d~ll~aL~~ 529 (1016)
.|..+.+|++-.+..+++ ++|+..+..
T Consensus 415 ~P~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 415 FPAAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred CCCceEEEEEeeeccHHHHHHHHHHHHH
Confidence 467899999999998886 566666653
No 283
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.51 E-value=2.4e-12 Score=148.91 Aligned_cols=210 Identities=17% Similarity=0.110 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhh
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID 292 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~ 292 (1016)
..+|++.+|++.|.+. +..+.+||+|+.++++++ . ++||+||++...+..+...+...+..+|++++++|+++.+
T Consensus 66 ~~~lE~~la~leg~~~--av~~sSG~aAi~~al~al-l--~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSL-I--KKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 3457789999999876 789999999999888776 3 3799999998877777766655566789999999986543
Q ss_pred c--cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001769 293 Y--KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1016)
Q Consensus 293 ~--l~~-~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~lg~P~g~GG 367 (1016)
. +++ ++++|++..| |.++.+.|+++|+++||++| ++| ++.++.+....|-.+|+|++++|+ |.++++-..
T Consensus 141 ~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvV-D~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~-- 215 (384)
T PRK06434 141 SLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIV-DATFASPYNQNPLDLGADVVIHSATKYISGHSDV-- 215 (384)
T ss_pred heeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEE-ECCCCCcccCCchhcCCCEEEeecccccCCCCCc--
Confidence 3 555 6899999887 68899999999999999998 456 344555566667789999999998 777543211
Q ss_pred cceEEEEeeh-hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHH
Q 001769 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1016)
Q Consensus 368 P~~Gfl~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~i 446 (1016)
-+|.+.+++ ++..++- ..|+..|.. . .+ ..|+ +...|-+-|..+
T Consensus 216 -~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~~-~---~~---~~A~--l~~~gL~tL~~R 260 (384)
T PRK06434 216 -VMGVAGTNNKSIFNNLV-------------------------ERRKTLGSN-P---DP---IQAY--LALRGLKTLGLR 260 (384)
T ss_pred -eEEEEecCcHHHHHHHH-------------------------HHHHhcCCC-C---CH---HHHH--HHHhCCCcHHHH
Confidence 146666643 3332220 001111100 0 11 1222 344555667777
Q ss_pred HHHHHHHHHHHHHHHhcCCCe
Q 001769 447 AQRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 447 a~~~~~~a~~L~~~L~~~G~~ 467 (1016)
.++..+++..+++.|++.+.+
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCc
Confidence 788889999999999987544
No 284
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=5.1e-12 Score=144.71 Aligned_cols=268 Identities=15% Similarity=0.128 Sum_probs=178.5
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh----
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---- 290 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~---- 290 (1016)
++++.+|++++.++.++.++.|++.++..++.++. .+||+|++++-.|+.+...+ +..|++++.++.++
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~---~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF---NHDRPLLFPDITYSFYPVYA----GLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc---CCCCEEEEeCCCHHHHHHHH----HHcCCEEEEeecCCCCCC
Confidence 67789999999999999999999988777666653 37999999999887766554 34588888876532
Q ss_pred -hhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC-CcEEEEEeccccccC---CCCCCcccceEEEecC-ccccccC
Q 001769 291 -IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTI---LKPPGELGADIVVGSA-QRFGVPM 363 (1016)
Q Consensus 291 -L~~l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~-GalviV~a~~~alg~---l~~pg~~GaDivvgs~-k~lg~P~ 363 (1016)
++++...+++|++.+| |.+|.+.+.+++.++++.+ |++++++.....++. +.......-.|+++|. |.|+.|
T Consensus 137 d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 215 (353)
T PRK05387 137 DVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLA- 215 (353)
T ss_pred CHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcch-
Confidence 2223235677888888 6899999999999999876 888888421111211 0000122346888887 888654
Q ss_pred CCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccH
Q 001769 364 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 443 (1016)
Q Consensus 364 g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl 443 (1016)
|...||+++++++++.+. +.+...+..+...+ +..++. ..+...+.+
T Consensus 216 ---GlR~G~~~~~~~~~~~l~----------------------------~~~~~~~~~~~~~~-~q~~~~-~~l~~~~~~ 262 (353)
T PRK05387 216 ---GLRVGFAIGHPELIEALN----------------------------RVKNSFNSYPLDRL-AQAGAI-AAIEDEAYF 262 (353)
T ss_pred ---hhhceeeecCHHHHHHHH----------------------------HhhccCCCCCcCHH-HHHHHH-HHhcCHHHH
Confidence 445789988877765541 00000011111111 111221 112223446
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeccc----CCeEEEEeccCCCH
Q 001769 444 KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTTL 517 (1016)
Q Consensus 444 ~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~~----~~~lris~te~~t~ 517 (1016)
+++.+++.++.+++.+.|+++| +++.... ..-+.+..++ +.++.+.|.++||.++... .+.+|++++ +.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~ 337 (353)
T PRK05387 263 EETRAKVIATRERLVEELEALG-FEVLPSK-ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TD 337 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CeECCCc-CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CH
Confidence 7788888899999999999987 8765321 1123345543 7889999999999886542 468999987 67
Q ss_pred HHHHHHHHHHh
Q 001769 518 EDVDKLFIVFA 528 (1016)
Q Consensus 518 edid~ll~aL~ 528 (1016)
+++++++++|.
T Consensus 338 ~~~~~~~~~L~ 348 (353)
T PRK05387 338 EEMEALVDALK 348 (353)
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 285
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.50 E-value=8.3e-13 Score=153.43 Aligned_cols=227 Identities=16% Similarity=0.201 Sum_probs=151.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~ 706 (1016)
..|..+...++++.+++++|.+.. +.+++|++|..+++.++. +++|+|++++..|.++...+.+.+.+.+.
T Consensus 78 ~~G~~~~~~~le~~ia~~~g~~~~-ii~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~~~~~~~~~~ 148 (393)
T TIGR01822 78 ICGTQDIHKELEAKIAAFLGTEDT-ILYASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGVRLCKAKRYR 148 (393)
T ss_pred ccCChHHHHHHHHHHHHHhCCCcE-EEECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHhcCCceEE
Confidence 347777888999999999998754 445677666644433331 36789999999998877777777776655
Q ss_pred EcCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcC-----
Q 001769 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT----- 777 (1016)
Q Consensus 707 v~~d~~g~iD~~~L~~~i~~~---~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~----- 777 (1016)
++ .+|++++++++++. +.+|++|+++++ |.+|.+. |+++|+++|+++|+++++|.++..+..+..
T Consensus 149 ~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~ 222 (393)
T TIGR01822 149 YA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-PLDEICDLADKYDALVMVDECHATGFLGPTGRGSH 222 (393)
T ss_pred eC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchH
Confidence 43 37999999999732 127888888876 5789987 899999999999999999998753332211
Q ss_pred -CCC-ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHH
Q 001769 778 -SPG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1016)
Q Consensus 778 -~pg-~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~ 855 (1016)
..+ ..++|+++.++||+++ |+.+|++++++++.+.+..... ....++.. + ...+..
T Consensus 223 ~~~~~~~~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~~~-----------~~~~~~~~-~----~~~~~a 280 (393)
T TIGR01822 223 ELCGVMGRVDIITGTLGKALG------GASGGFTTARKEVVELLRQRSR-----------PYLFSNSL-P----PAVVGA 280 (393)
T ss_pred HhcCCCCCCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHhCc-----------cceecCCC-C----HHHHHH
Confidence 011 1258999999999983 4567899888766554311000 00001100 1 111222
Q ss_pred HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 856 a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
+.+.+..+ ++.++..++...+.+++.+.|++ ++++
T Consensus 281 ~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 316 (393)
T TIGR01822 281 SIKVLEML--EASNELRDRLWANTRYFRERMEAAGFDI 316 (393)
T ss_pred HHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34444443 23556677888899999999987 4554
No 286
>PLN02271 serine hydroxymethyltransferase
Probab=99.50 E-value=1.8e-12 Score=152.21 Aligned_cols=291 Identities=12% Similarity=0.024 Sum_probs=188.8
Q ss_pred HHHHHHHHcCCCC----ccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHH-----HhhcCCCeEEEEe
Q 001769 216 FQTMIADLTGLPM----SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-----TRADGFDIKVVVS 286 (1016)
Q Consensus 216 ~q~~iA~L~G~~~----anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~-----~~a~~~gi~v~~v 286 (1016)
.++...+|+|++. +|+-.+ +|+.|+.++++|+ + ++||+|+..+..|...+.... ..+...|+.+..+
T Consensus 199 a~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~AL-l--~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~v 274 (586)
T PLN02271 199 CCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGL-L--LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESL 274 (586)
T ss_pred HHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHh-c--CCCCEEEEecCCCCCchhcccccccccccccccceEEEE
Confidence 4577888999887 787777 7777888888888 3 389999999988876655421 1123345444432
Q ss_pred -----------Cchhhhc--cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCccc
Q 001769 287 -----------DLKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELG 348 (1016)
Q Consensus 287 -----------d~~~L~~--l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-----~~pg~~G 348 (1016)
|++++++ ...++++|++....+. ...|+++|.++|+++|++++|++ .+..|++ ..|.. +
T Consensus 275 pY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp-r~~D~~~i~eIAdevGA~LmvD~-AH~aGLIa~g~~~sP~~-~ 351 (586)
T PLN02271 275 PYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP-REWDYARFRQIADKCGAVLMCDM-AHISGLVAAKECVNPFD-Y 351 (586)
T ss_pred EcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-CcCCHHHHHHHHHHcCCEEEEEC-cccccccccCcCCCCCc-C
Confidence 3455665 4678898888665444 66799999999999999999942 3444544 23333 6
Q ss_pred ceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHH
Q 001769 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1016)
Q Consensus 349 aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~ 427 (1016)
|||+++++ |+|.+|. .|+++++++....+.|...+++.+.. .+.+.-.+ .+.-.-..+.|+.|. .+.
T Consensus 352 aDvvt~TTHKtLrGPr------GG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI-~~aVfPglqgGphn~----~IA 419 (586)
T PLN02271 352 CDIVTSTTHKSLRGPR------GGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKI-NFAVFPSLQGGPHNN----HIA 419 (586)
T ss_pred CcEEEeCCcccCCCCC------ceEEEecccccccccCCccccccccc-cHHHHHHh-hcccCCccccChhHH----HHH
Confidence 99999999 8776554 46788888776666666555542210 00000000 000000233444443 344
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCC----HHHHHHHHHHcCceeec-
Q 001769 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD----AHAIASAAYKIEMNLRV- 501 (1016)
Q Consensus 428 a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~~----~~~v~~~L~~~GI~~~~- 501 (1016)
|++.++ .+......++-++++.+||+.|++.|.+.| ++++.. ..-+.|.+++.. ...+.+.|.+.||.+..
T Consensus 420 alAval--kea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn 496 (586)
T PLN02271 420 ALAIAL--KQVATPEYKAYMQQVKKNAQALASALLRRK-CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKT 496 (586)
T ss_pred HHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHHHCC-CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccc
Confidence 554444 333333458899999999999999999998 998842 333446665532 67788888888997643
Q ss_pred --------ccCCeEEEEeccCCC----HHHHHHHHHHHh
Q 001769 502 --------VDSNTVTASFDETTT----LEDVDKLFIVFA 528 (1016)
Q Consensus 502 --------~~~~~lris~te~~t----~edid~ll~aL~ 528 (1016)
..++.||+...+.++ ++|++.+.+.+.
T Consensus 497 ~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 497 AIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred cCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 235779999888765 577777666664
No 287
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.50 E-value=4.4e-12 Score=145.90 Aligned_cols=294 Identities=15% Similarity=0.076 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHcCCCCcc--EEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHH-HhhcCCCe-EEEE
Q 001769 210 LESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-TRADGFDI-KVVV 285 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~~~an--asl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~-~~a~~~gi-~v~~ 285 (1016)
.+.+.+.++.+.++++.+..+ +.+..+||+++||+++.+-- .++++|++.. .+. .-|. ..++.+|+ ++..
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~--~~g~~vLv~g-~FG---~r~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG--CRGVDVLAWE-SFG---KGWVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC--CCCCeEEEEC-HHH---HHHHHHHHHhcCCCCcEE
Confidence 467778888999999975332 44568899999999887631 1577888864 333 2222 34556677 3555
Q ss_pred eCch-----hhhccCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cc
Q 001769 286 SDLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QR 358 (1016)
Q Consensus 286 vd~~-----~L~~l~~~t~~V~v~~-pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~GaDivvgs~-k~ 358 (1016)
++.+ +++.+..+ +.|++++ -+.+|+..|+++|++.. ++++++|++ ..++|...-.-+ ++|+++.++ |.
T Consensus 112 l~~~~g~~~~~~~ve~~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa-vSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDFK-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA-TSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred EcCCCCCCCCHHHcCCC-CCEEEecCCCchheecccccccccc--CCCcEEEEc-cchhcCCCCChh-HCcEEEEechhc
Confidence 4421 12222222 2244554 57899999998777433 488888843 235554432222 599999999 66
Q ss_pred ccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccc---ccccccccCCccchhhHHHHHHHHHHH
Q 001769 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYA 435 (1016)
Q Consensus 359 lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtre---qhiRRekaTsnicT~~~l~a~~Aa~y~ 435 (1016)
|++| ||++|+.++++.+.++.-+--- .| -+. .+.++... .+.+ ..-|.|......++++..++
T Consensus 187 L~~p-----pGls~v~vs~~Al~~~~~~~~y--~~---~~~-~~~~~~~~~~~~~~~-~~~t~~TP~v~~l~a~~~~l-- 252 (374)
T TIGR01365 187 LGGE-----GAHGMLILSPRAVARLESYTPA--WP---LPK-IFRLTKGGKLNKKIF-EGSTINTPSMLCVEDWLDAL-- 252 (374)
T ss_pred cCCC-----CceEEEEECHHHHHHHhhcCCC--CC---Chh-hhccccccchhhhhh-cCCCCCChHHHHHHHHHHHH--
Confidence 7655 6789999999887664310000 00 000 11111100 0111 22356654445555554444
Q ss_pred HHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---CCccE-EEEec--C-------C-----HHHHHHHHHHcC
Q 001769 436 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDT-VKVKC--A-------D-----AHAIASAAYKIE 496 (1016)
Q Consensus 436 ~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~---~~~~~-v~i~~--~-------~-----~~~v~~~L~~~G 496 (1016)
.++..+ |++++.+|..++++.+++.++++|.++++.. ...++ +++.. + + +.++.+.|.++|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 445454 8999999999999999999999974566532 12332 22333 2 1 468999999999
Q ss_pred ceeec----ccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 497 MNLRV----VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 497 I~~~~----~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
|.+.. .-+..+||.-.-..+.+|++.|++.|.
T Consensus 333 i~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 333 VAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred EEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 97642 124789999999999999999999874
No 288
>PRK09082 methionine aminotransferase; Validated
Probab=99.50 E-value=1.3e-12 Score=151.72 Aligned_cols=274 Identities=12% Similarity=0.131 Sum_probs=174.3
Q ss_pred HHHHHHHHhccccCCCccccccccccCCCChhhhhcccccccc-cccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCc--
Q 001769 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (1016)
Q Consensus 573 ~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~-- 649 (1016)
+++.+..+.+++ ++|.||.|.+.+++.......-.... ..++.|.+ .+|..++..++++++.+++|.+.
T Consensus 19 ~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~ 90 (386)
T PRK09082 19 IFTVMSALAAEH-----GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPP---MTGVAALREAIAAKTARLYGRQYDA 90 (386)
T ss_pred HHHHHHHHHhhC-----CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 556666665542 46889888776653322221111001 11233444 57888899999999999999752
Q ss_pred -eeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHc
Q 001769 650 -FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (1016)
Q Consensus 650 -~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~g~iD~~~L~~~i~~ 726 (1016)
..+..++| ++|. .++++.+. .++++|+++...|+.+...++..|.+++.++.+. ++.+|+++++++++
T Consensus 91 ~~~i~~t~G~~~al---~~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~- 161 (386)
T PRK09082 91 DSEITVTAGATEAL---FAAILALV-----RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161 (386)
T ss_pred CCcEEEeCCHHHHH---HHHHHHHc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-
Confidence 23445555 4443 33343331 3578999999988888777888999999999974 57899999999997
Q ss_pred CCCCEEEEEEEcC-CCCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cC--cCC----CCccCCcEEEeCcccccc
Q 001769 727 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTS----PGYIGADVCHLNLHKTFC 796 (1016)
Q Consensus 727 ~~~~t~~v~i~~P-n~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~--l~~----pg~~GaDi~~~s~hK~~~ 796 (1016)
+++++|++++| |.+|.+. .++++|.++|+++|+++++|.+...-. .+ ... ++..+-.+++.|++|.|+
T Consensus 162 --~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 162 --PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH 239 (386)
T ss_pred --ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc
Confidence 78999999998 5688762 379999999999999999997642111 01 011 111223477889999986
Q ss_pred CCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHH
Q 001769 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1016)
Q Consensus 797 ~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~ 876 (1016)
+| |..+|++++++++...+-.. ......+. +.....++..+|.. +.+-++++.+...
T Consensus 240 ~~----G~RiG~iv~~~~l~~~~~~~--------------~~~~~~~~----~~~~q~~~~~~l~~-~~~~~~~~~~~~~ 296 (386)
T PRK09082 240 VT----GWKVGYCVAPAALSAEFRKV--------------HQYNTFTV----NTPAQLALADYLRA-EPEHYLELPAFYQ 296 (386)
T ss_pred ch----hhhhhhhhCCHHHHHHHHHH--------------HhhhcCCC----ChHHHHHHHHHHhC-ChHHHHHHHHHHH
Confidence 44 56789999887665433110 00000111 11122223344432 3445666666677
Q ss_pred HHHHHHHHHHhc
Q 001769 877 LNANYMAKRLEK 888 (1016)
Q Consensus 877 ~nA~yla~~L~~ 888 (1016)
++.+++.+.|++
T Consensus 297 ~~~~~~~~~L~~ 308 (386)
T PRK09082 297 AKRDRFRAALAN 308 (386)
T ss_pred HHHHHHHHHHHh
Confidence 888889899887
No 289
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.50 E-value=2.4e-12 Score=149.21 Aligned_cols=289 Identities=14% Similarity=0.119 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---- 288 (1016)
..++++.+|+++|.+. +..+.+||++...++.++... +||+|+++...|+++...++ ..|++++.+|+
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGVG--PGDRVWTTPITFVATANCAL----YCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHH----HcCCEEEEEecCCCc
Confidence 3457889999999864 567788998888877776443 79999999999999887754 35888888665
Q ss_pred -----hhhhc-cC----CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccc----eEEEe
Q 001769 289 -----KDIDY-KS----GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA----DIVVG 354 (1016)
Q Consensus 289 -----~~L~~-l~----~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~~Ga----Divvg 354 (1016)
+++++ ++ ++|++|++++ ++|...|+++|.++|+++|++++++ ..+++|.......+|. |++++
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~~~~~i~~l~~~~~~~lI~D-~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSVDMQAIAALAKKHGLKIIED-ASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccCCHHHHHHHHHHcCCEEEEE-CCCcccCccCCEeCCCccccceEEE
Confidence 33555 66 6789888766 4799999999999999999999984 3556654322334555 99999
Q ss_pred cC---ccccccCCCCCcceEEEEe-ehhhhhcCCC-ceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHH
Q 001769 355 SA---QRFGVPMGYGGPHAAFLAT-SQEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1016)
Q Consensus 355 s~---k~lg~P~g~GGP~~Gfl~~-~~~l~~~lpg-rivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~ 429 (1016)
|+ |.++.+ .+|++.+ ++++.+++.. +.-|...+... + ...+ +...+.+..+ +..+..+..+
T Consensus 180 S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~---~-~~~~--~~~~~~~~~~--~g~n~~m~~l 245 (380)
T TIGR03588 180 SFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLL---F-EKQD--EGPWYYEQQE--LGFNYRMTDI 245 (380)
T ss_pred ecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCccc---c-cccc--cCcceeeeec--cccccCccHH
Confidence 96 445322 2345555 4555544421 11121111000 0 0000 0000111111 0001111122
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-------CccEEEEecC---CHHHHHHHHHHcCcee
Q 001769 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-------FFDTVKVKCA---DAHAIASAAYKIEMNL 499 (1016)
Q Consensus 430 ~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~-------~~~~v~i~~~---~~~~v~~~L~~~GI~~ 499 (1016)
.|++-... -+.++++.++-.++++++.+.|.+++++++...+ ..-.+.+... ...++.+.|.++||.+
T Consensus 246 ~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 246 QAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 33321111 1346788888899999999999998645544221 1112333321 2689999999999965
Q ss_pred ecc-------------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 500 RVV-------------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 500 ~~~-------------------------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.. ....|.+.++...|++|++.++++|.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~ 377 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence 310 01558888999999999999999886
No 290
>PLN00175 aminotransferase family protein; Provisional
Probab=99.50 E-value=3.5e-12 Score=149.60 Aligned_cols=276 Identities=18% Similarity=0.178 Sum_probs=175.0
Q ss_pred HHHHHHHHhccccCCCccccccccccCCCChhhhhccccccccc-ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--c
Q 001769 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--S 649 (1016)
Q Consensus 573 ~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~ 649 (1016)
.++.+.+++.. .++|.|+.|.+.+++............. ..+.|.+ .+|..++...+.+++.+..|.+ .
T Consensus 43 ~~~~~~~~~~~-----~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~ 114 (413)
T PLN00175 43 IFTQMSSLAIK-----HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYAR---GFGVPELNSAIAERFKKDTGLVVDP 114 (413)
T ss_pred HHHHHHHHhhc-----CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCC---CCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 34555555443 2578899988877654322211000000 1233444 5688888888888888877865 2
Q ss_pred e-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHcC
Q 001769 650 F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEAN 727 (1016)
Q Consensus 650 ~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~g~iD~~~L~~~i~~~ 727 (1016)
. .+..++|++. +..++++.+. +++++|+++++.|..+...+...|.+++.+++++ ++.+|+++|+++++
T Consensus 115 ~~~I~vt~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-- 185 (413)
T PLN00175 115 EKEVTVTSGCTE--AIAATILGLI-----NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-- 185 (413)
T ss_pred CCCEEEeCCHHH--HHHHHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC--
Confidence 2 4555666532 2233333321 3678999999988877778889999999999974 47899999999997
Q ss_pred CCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cC----c-CCCCccCCcEEEeCccccccCC
Q 001769 728 RDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG----L-TSPGYIGADVCHLNLHKTFCIP 798 (1016)
Q Consensus 728 ~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~----l-~~pg~~GaDi~~~s~hK~~~~p 798 (1016)
+++++|++++|+ .+|.+. .++++|+++|+++|+++++|.+...-. .+ + ..++..+-.|++.|+.|.|++|
T Consensus 186 -~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 186 -SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred -cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 789999999995 688875 368889999999999999998753111 11 0 0112223347788999999655
Q ss_pred CCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHH
Q 001769 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1016)
Q Consensus 799 hg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~n 878 (1016)
|..+|++++++++...+-.. ......+.+ ...-.++..+|.. +.+-+++..+....+
T Consensus 265 ----G~RiG~~v~~~~l~~~l~~~--------------~~~~~~~~s----~~~Q~a~~~~l~~-~~~~~~~~~~~~~~~ 321 (413)
T PLN00175 265 ----GWKIGWAIAPPHLTWGVRQA--------------HSFLTFATA----TPMQWAAVAALRA-PESYYEELKRDYSAK 321 (413)
T ss_pred ----chheeeeEeCHHHHHHHHHH--------------HhhccCCCC----HHHHHHHHHHHhC-CHHHHHHHHHHHHHH
Confidence 57799999987765543110 000011111 1122222334432 333366677777888
Q ss_pred HHHHHHHHhcc
Q 001769 879 ANYMAKRLEKH 889 (1016)
Q Consensus 879 A~yla~~L~~~ 889 (1016)
.+++.+.|++.
T Consensus 322 ~~~l~~~L~~~ 332 (413)
T PLN00175 322 KDILVEGLKEV 332 (413)
T ss_pred HHHHHHHHHHC
Confidence 89999999873
No 291
>PRK07179 hypothetical protein; Provisional
Probab=99.49 E-value=3.8e-12 Score=148.98 Aligned_cols=219 Identities=19% Similarity=0.205 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
...++++.|++++|.+.+ +++++|++++.+++.++. .+++.|+++...|.+....+...|.+++.++.
T Consensus 100 ~~~~le~~la~~~g~~~~-~~~~sG~~An~~~l~~l~--------~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~--- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFESC-LLCQSGWAANVGLLQTIA--------DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH--- 167 (407)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEECCcCHHHHHHHHHCCCeEEEecC---
Confidence 445788899999999865 668888876655444432 24678999988887776667788888876653
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcC------CCC-ccCC
Q 001769 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YIGA 784 (1016)
Q Consensus 713 g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~------~pg-~~Ga 784 (1016)
.|+++|++++++ .++++|++++|+ .+|.+. |+++|.++|+++|+++++|.++..+..+.. ..+ ..++
T Consensus 168 --~d~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~-pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~v 242 (407)
T PRK07179 168 --NDVDHLRRQIER--HGPGIIVVDSVYSTTGTIA-PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRV 242 (407)
T ss_pred --CCHHHHHHHHHh--cCCeEEEECCCCCCCCccc-cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCC
Confidence 699999999972 247888888875 689997 899999999999999999999864432211 011 1246
Q ss_pred cEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhC
Q 001769 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1016)
Q Consensus 785 Di~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG 864 (1016)
|+++.|+||+++ + ++|++++++++.+.++.... ....+ +++..+ .++.+.+.+..+.
T Consensus 243 di~~~S~sK~~g------~-~~G~l~~~~~~~~~~~~~~~-----------~~~~~---~t~~~~--~~aa~~aal~~~~ 299 (407)
T PRK07179 243 HFITASLAKAFA------G-RAGIITCPRELAEYVPFVSY-----------PAIFS---STLLPH--EIAGLEATLEVIE 299 (407)
T ss_pred CEEEeechHhhh------c-cCeEEEeCHHHHHHHHHhCc-----------CeeeC---CCCCHH--HHHHHHHHHHHHh
Confidence 999999999984 2 36889888776554421000 00001 111111 1122234444442
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 865 SKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 865 ~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
. ..+..++...+++++.++|++ ++++.
T Consensus 300 ~--~~~~~~~l~~~~~~l~~~L~~~g~~v~ 327 (407)
T PRK07179 300 S--ADDRRARLHANARFLREGLSELGYNIR 327 (407)
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 2 245667888899999999987 45543
No 292
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.49 E-value=1.8e-11 Score=141.91 Aligned_cols=304 Identities=11% Similarity=0.092 Sum_probs=184.3
Q ss_pred cCCCCCCCCChHHHHHHHHhC--CCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHh
Q 001769 171 IGMGYYNTHVPPVILRNIMEN--PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~--~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~ 248 (1016)
+|.|..+...|+.+.+.+.+- ..+++.|.+. +| ..++++.+|+++|.+..++.+++|+|.++..++.++
T Consensus 33 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 33 MGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPP-----EG----FPELRELILKDLGLDDDEALITAGATESLYLVMRAF 103 (380)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC-----cc----hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 355655555566655444321 2233444332 22 456788999999999889999999998877666554
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----------hhhhc-cCCCEeEEEEEcC-CCCeeec--
Q 001769 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL-- 313 (1016)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-----------~~L~~-l~~~t~~V~v~~p-n~~G~i~-- 313 (1016)
. ++|++|++++..|+.....+ +..|.+++.+++ ++++. +++++++|++.+| |.+|.+.
T Consensus 104 ~---~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 104 L---SPGDNAVTPDPGYLIIDNFA----SRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred c---CCCCEEEEcCCCCcchHHHH----HHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 2 37899999998887655443 345777776553 33444 6678999988888 5799865
Q ss_pred -cHHHHHHHHHhCCcEEEEEecccc---ccCCCCCC--cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCc
Q 001769 314 -DYGDFIKNAHANGVKVVMATDLLA---LTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1016)
Q Consensus 314 -dl~eI~~lah~~GalviV~a~~~a---lg~l~~pg--~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgr 386 (1016)
++++|+++|+++|++++++. ... .+.. ... .-...+++.+. |.||.| |-..|++++++++++.+...
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~-~~~~~~~~~~i~~~s~SK~~g~~----G~RiG~i~~~~~l~~~~~~~ 250 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDC-TYRDFAREHT-LAAEYAPEHTVTSYSFSKIFGMA----GLRIGAVVATPDLIEVVKSI 250 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEeh-hHHHHhccCC-chhhcCCCCEEEEeechhhcCCc----cceeEEEecCHHHHHHHHHH
Confidence 59999999999999999942 210 1100 001 11345677775 877432 33469999988877665210
Q ss_pred eEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001769 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1016)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~ 466 (1016)
. +...+++... ..++...+.. ..+-++++.+...++..++.+.|+++.+
T Consensus 251 ~-----------------------------~~~~~~~~~~-~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 251 V-----------------------------INDLGTNVIA-QEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred H-----------------------------hcccCCCHHH-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 0 0011111111 1111111111 1122355555566677788888887522
Q ss_pred eEEc-CCCCccEEEEecC----CHHHHHHHHHHcCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 467 VEVQ-GLPFFDTVKVKCA----DAHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 467 ~~l~-~~~~~~~v~i~~~----~~~~v~~~L~~~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+.+. .++.-.-+.+.++ ...++.+.|.++||.++.. .++.+|+|+.. ++++++++++.|..
T Consensus 300 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~ 372 (380)
T PRK06225 300 VFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPD 372 (380)
T ss_pred CccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHH
Confidence 4321 1111111333332 2788999999999987542 23589999863 78999999999963
No 293
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.49 E-value=3.8e-12 Score=148.05 Aligned_cols=263 Identities=16% Similarity=0.144 Sum_probs=165.5
Q ss_pred cccccccccCCCChhhhhcccccccc--cccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC---ceeeecCChHHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSF--ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAG 664 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f--~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~---~~~l~~~sGa~ae~a~ 664 (1016)
+.+.||.|.+.+++......+....+ .....|.+ .+|..++...+++++++.+|.+ ...+..++|++. +.
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~--~l 102 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNM--AF 102 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHH--HH
Confidence 35678888776544322221111011 01123443 5788889999999999999974 334556666531 22
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCc
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THG 743 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G 743 (1016)
..+++.+. .++++|+++++.+..+...+...|++++.++.+.++.+|+++++++++ +++++|++.+|+ .+|
T Consensus 103 ~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~~p~NPtG 174 (389)
T PRK05957 103 MNAILAIT-----DPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT---PKTRAIVTISPNNPTG 174 (389)
T ss_pred HHHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC---cCceEEEEeCCCCCCC
Confidence 33333321 357899999888877777778899999999998778899999999997 789999999985 689
Q ss_pred cccc--cHHHHHHHHHHcCcEEEEEccccc-cccC--cCC----CCccCCcEEEeCccccccCCCCCCCCeEEEEEEccc
Q 001769 744 VYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG--LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 814 (1016)
Q Consensus 744 ~i~~--di~~I~~ia~~~g~lv~vDga~~~-a~~~--l~~----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~ 814 (1016)
.+.+ ++++|+++|+++|+++++|.+... .... ... +....--|++.|++|.|+.| |..+|+++++++
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~ 250 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFA----SWRIGYMVIPIH 250 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCc----cceeEEEecCHH
Confidence 8872 499999999999999999977420 0010 001 11222236778999998543 456999999877
Q ss_pred ccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 815 LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 815 l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+.+.+.... .+...+.+. ..-.++..+|. -|.+-+++..++..++.+++.+.|++
T Consensus 251 ~~~~~~~~~--------------~~~~~~~~~----~~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~ 305 (389)
T PRK05957 251 LLEAIKKIQ--------------DTILICPPV----VSQYAALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQ 305 (389)
T ss_pred HHHHHHHHH--------------hhcccCCCc----HHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 665542110 000111111 11111222332 12233556666667777888888876
No 294
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=1.1e-12 Score=146.83 Aligned_cols=313 Identities=15% Similarity=0.173 Sum_probs=203.0
Q ss_pred ccccCCCCCC-CCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHH
Q 001769 168 KSFIGMGYYN-THVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1016)
Q Consensus 168 ~~~lG~g~y~-~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~ 246 (1016)
-||+|.+... .-.|++.. .+...+-|.. .+..-.|+.+.+.++++.+|+++|.+. +..+.-|-+.+...+-
T Consensus 144 YNYLGFa~~~g~ca~~~~~-~~~kygl~~c-----ss~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~mGf~TNs~~~p 215 (519)
T KOG1357|consen 144 YNYLGFAQSVGPCAEASLK-SFDKYGLSRC-----SSRHEAGTTEEHKELEELVARFLGVED--AIVFSMGFATNSMNIP 215 (519)
T ss_pred cccccccccCCcCChHHHH-HHHHhccccc-----ccchhcccHHHHHHHHHHHHHhcCCcc--eEEEeccccccccCcc
Confidence 3577766422 22555553 4544333322 233457999999999999999999998 5555555443332222
Q ss_pred HhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE---eCchhhhc-c-------CCCE-----e-EEEEEc-CCC
Q 001769 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV---SDLKDIDY-K-------SGDV-----C-GVLVQY-PGT 308 (1016)
Q Consensus 247 a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~---vd~~~L~~-l-------~~~t-----~-~V~v~~-pn~ 308 (1016)
++ . +++.-|+.++.+|.|++-.+ +..|..+++ .|+.+||+ + .++| + .|++.. -++
T Consensus 216 ~l-~--~~gsLIiSDelNHaSi~~Ga----RLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysm 288 (519)
T KOG1357|consen 216 SL-L--GKGSLIISDELNHASLITGA----RLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSM 288 (519)
T ss_pred ee-e--cCCcceeeccccchheeccc----cccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceec
Confidence 33 2 47888999999999988775 345665555 56666664 2 2333 2 334443 478
Q ss_pred CeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCc-----c-----cceEEEecC-ccccccCCCCCcceEEEEeeh
Q 001769 309 EGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE-----L-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQ 377 (1016)
Q Consensus 309 ~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~-----~-----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~ 377 (1016)
-|.|.++++++++.+++.+++++ +.+++.|.+.+-|. + .+||.+|+. |+||. + .|+++.++
T Consensus 289 Eg~iv~Lp~vvalkkkykayl~l-DEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga----~---GGyiagsk 360 (519)
T KOG1357|consen 289 EGTIVDLPEVVALKKKYKAYLYL-DEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA----A---GGYIAGSK 360 (519)
T ss_pred cCeecccHHHHHhhccccEEEEe-eccccccccCCCCcceeeccCCCchhheeecceehhhccc----c---cceecCcH
Confidence 99999999999999999999999 45677776654332 2 379999998 76652 2 37999999
Q ss_pred hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhC---cccHHHHHHHHHHHH
Q 001769 378 EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG---PEGLKTIAQRVHGLA 454 (1016)
Q Consensus 378 ~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g---~~Gl~~ia~~~~~~a 454 (1016)
++++.+--. .+ +.. -+|+ + ..++....-.......| ..+.++..+++.+++
T Consensus 361 ~lid~lrt~--------s~---~~~------------yat~-~--sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns 414 (519)
T KOG1357|consen 361 ELIDYLRTP--------SP---SAL------------YATS-L--SPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENS 414 (519)
T ss_pred HHHhhhccC--------CC---cee------------eccc-C--ChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhh
Confidence 988776210 00 000 0110 0 01111111111123344 345678889999999
Q ss_pred HHHHHHHhcCCCeEEcCC--CCccEEEEecCC-HHHHHHHHHHcCceeec-------ccCCeEEEEeccCCCHHHHHHHH
Q 001769 455 GTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-AHAIASAAYKIEMNLRV-------VDSNTVTASFDETTTLEDVDKLF 524 (1016)
Q Consensus 455 ~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~-------~~~~~lris~te~~t~edid~ll 524 (1016)
+|++..|++.| |.+++. +...++.+..+. ...+.+.|.+++|-+-. +-.+++|+|.+..||+|+++.++
T Consensus 415 ~yfr~~l~~~g-fivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l 493 (519)
T KOG1357|consen 415 RYFRWELQKMG-FIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRAL 493 (519)
T ss_pred HHHHHhhhcCc-EEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHH
Confidence 99999999988 888753 333345555554 56778888888774321 22477899999999999999999
Q ss_pred HHHhCC
Q 001769 525 IVFAGG 530 (1016)
Q Consensus 525 ~aL~~~ 530 (1016)
+.+...
T Consensus 494 ~~i~~~ 499 (519)
T KOG1357|consen 494 EVIDRV 499 (519)
T ss_pred HHHhhh
Confidence 998653
No 295
>PLN02721 threonine aldolase
Probab=99.49 E-value=1.8e-12 Score=148.01 Aligned_cols=170 Identities=17% Similarity=0.196 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH---HHHhCCcEEEEEcCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~---~a~~~G~~vv~v~~d 710 (1016)
..++++.+++++|.+.. ++.++|+++.++++.++. + .++++|++++.+|..... .+...|.+++.++.+
T Consensus 42 ~~~l~~~la~~~~~~~~-~~~~~Gs~a~~~~l~~~~------~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKEAA-LFVPSGTMGNLISVLVHC------D-VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN 113 (353)
T ss_pred HHHHHHHHHHHhCCcee-EEecCccHHHHHHHHHHc------c-CCCCeEEEcCccceehhcccchhhhcCceeEecCCC
Confidence 45788999999998864 555667766544433321 1 157899999998854333 467789999999988
Q ss_pred CCCCCCHHHHHHHHHcCC----CCEEEEEEEcC-C-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc---cCcCCC
Q 001769 711 AKGNINIEELRKAAEANR----DNLSTLMVTYP-S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSP 779 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~----~~t~~v~i~~P-n-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~---~~l~~p 779 (1016)
++|.+|+++++++|++.. +++++|+++++ | .+|.+. .++++|.++|+++|+++++|+++.+.. .+. .+
T Consensus 114 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CH
Confidence 889999999999997321 47899999874 4 457664 238899999999999999999864321 111 22
Q ss_pred C--ccCCcEEEeCccccccCCCCCCCCeEEEEEEccccccc
Q 001769 780 G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 818 (1016)
Q Consensus 780 g--~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~ 818 (1016)
. ..++|.++.++||+|+ +|.+|+++.++++...
T Consensus 193 ~~~~~~~d~~~~s~sK~l~------~~~G~~~~~~~~~~~~ 227 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLG------APVGSVIVGSKSFIRK 227 (353)
T ss_pred HHHhhhCCEEEEecccccC------CceeeEEecCHHHHHh
Confidence 2 3378999999999985 3433455566665543
No 296
>PRK07505 hypothetical protein; Provisional
Probab=99.48 E-value=1.2e-11 Score=144.54 Aligned_cols=316 Identities=16% Similarity=0.182 Sum_probs=177.0
Q ss_pred CCccccccCCCCCC-CCChHHHHHHHHhCCC-cc-cccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHH
Q 001769 164 NKVYKSFIGMGYYN-THVPPVILRNIMENPA-WY-TQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAA 240 (1016)
Q Consensus 164 n~~~~~~lG~g~y~-~~~p~~i~~~i~~~~~-~~-t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa 240 (1016)
++.|.+|.+.++.+ |.-|.++. ++.+.-. |. + +++.+.. ....+.+.++++.+++++|. .+.++.+|+.+
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~-A~~~~l~~~g~~--~~~~~~~-~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a 117 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIE-GAVDALKRTGSL--HLSSSRT-RVRSQILKDLEEALSELFGA---SVLTFTSCSAA 117 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHH-HHHHHHHHhCCC--CCCccch-hhhhHHHHHHHHHHHHHhCC---CEEEECChHHH
Confidence 34456666655555 55555543 4432111 11 1 1111111 12356778899999999997 35667777777
Q ss_pred HHHHH-HHhc-c-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---chhhhc-cCCCEeEEEEEcC-CCCeee
Q 001769 241 AEAMA-MCNN-I-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-KSGDVCGVLVQYP-GTEGEV 312 (1016)
Q Consensus 241 ~eA~~-~a~~-~-~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd---~~~L~~-l~~~t~~V~v~~p-n~~G~i 312 (1016)
+++++ ++.+ . ..++++.|+.+...|+++...... .+ .+.+++.++ ++++++ +.++++++++.+| |.+|.+
T Consensus 118 ~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~-~~-~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~ 195 (402)
T PRK07505 118 HLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI-CA-DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGI 195 (402)
T ss_pred HHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh-hh-cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCc
Confidence 77554 3322 1 111334556667999986432211 22 245666665 455665 6666778888887 578999
Q ss_pred ccHHHHHHHHHhCCcEEEEEeccccccCCCCCC------cccc---e--EEEecC-ccccccCCCCCcceEEEEe-ehhh
Q 001769 313 LDYGDFIKNAHANGVKVVMATDLLALTILKPPG------ELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLAT-SQEY 379 (1016)
Q Consensus 313 ~dl~eI~~lah~~GalviV~a~~~alg~l~~pg------~~Ga---D--ivvgs~-k~lg~P~g~GGP~~Gfl~~-~~~l 379 (1016)
.|+++|.++|+++|+++++| +.++++.+.+.+ .+|. | +++.|. |.|+++ | |++.+ ++++
T Consensus 196 ~~~~~i~~l~~~~~~~li~D-Ea~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~----G---g~~~~~~~~~ 267 (402)
T PRK07505 196 APVKELLRLQEKYGLFLYID-DAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS----G---GVIMLGDAEQ 267 (402)
T ss_pred CCHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc----C---eEEEeCCHHH
Confidence 99999999999999999994 454443222111 2332 3 555565 877532 2 56654 5555
Q ss_pred hhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001769 380 KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 459 (1016)
Q Consensus 380 ~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~ 459 (1016)
.+.+... ...+.. . .|+++ .+..+..+++ ..+..+.+.+..+++.++..++.+
T Consensus 268 ~~~~~~~----------~~~~t~------------~--~~~~~-~a~aa~~a~l--~~~~~~~~~~~~~~l~~~~~~~~~ 320 (402)
T PRK07505 268 IELILRY----------AGPLAF------------S--QSLNV-AALGAILASA--EIHLSEELDQLQQKLQNNIALFDS 320 (402)
T ss_pred HHHHHHh----------CCCcee------------C--CCCCH-HHHHHHHHHH--HHHhccCcHHHHHHHHHHHHHHHH
Confidence 5544100 000100 0 11111 1222222222 344556666666666666555544
Q ss_pred HHhcCCCeEEcCCCCccEEEEecC--C-HHHHHHHHHHcCceeeccc-------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 460 GLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 460 ~L~~~G~~~l~~~~~~~~v~i~~~--~-~~~v~~~L~~~GI~~~~~~-------~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+... ....++....+..+ . +.++.++|.++||.++... .+.||+++...+|++|+++++++|.
T Consensus 321 ~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~ 394 (402)
T PRK07505 321 LIPTE-----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLK 394 (402)
T ss_pred HHHhc-----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHH
Confidence 33211 01122221122222 2 6789999999999886531 2589999999999999999999985
No 297
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.48 E-value=3e-12 Score=148.47 Aligned_cols=266 Identities=15% Similarity=0.105 Sum_probs=159.2
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-CC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KG 713 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~g 713 (1016)
.++++.+++++|.+.. +.+++|++|...++.++ +.+++++|++|...|......+...|++++.+++++ ++
T Consensus 32 ~~le~~la~~~g~~~~-v~~~sgt~al~~~l~al-------~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 32 PAFEEALAEYVGAKYA-VAFNSATSALHIACLAL-------GVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred HHHHHHHHHHHCCCeE-EEEcCHHHHHHHHHHHc-------CCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcC
Confidence 4788899999998764 55567766554333332 123678999999877666666778999999999975 57
Q ss_pred CCCHHHHHHHHHcCC-CCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCC----cEEE
Q 001769 714 NINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA----DVCH 788 (1016)
Q Consensus 714 ~iD~~~L~~~i~~~~-~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~Ga----Di~~ 788 (1016)
.+|++++++++++++ ++|++|+++++ +|... |+++|+++|+++|+++++|+++..+.. .....+|. |+++
T Consensus 104 ~~d~~~l~~~i~~~~~~~t~~v~~~~~--~G~~~-~~~~i~~l~~~~~~~lI~D~a~a~g~~--~~~~~~g~~~~~d~~~ 178 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGKLPKAIVPVDF--AGKSV-DMQAIAALAKKHGLKIIEDASHALGAE--YGGKPVGNCRYADATV 178 (380)
T ss_pred CcCHHHHHHHhhcccCCCceEEEEeCC--CCccC-CHHHHHHHHHHcCCEEEEECCCcccCc--cCCEeCCCccccceEE
Confidence 899999999997321 47889888765 58776 899999999999999999999865432 12222344 9999
Q ss_pred eCcc--ccccCCCCCCCCeEEEEEEc-ccccccCCCC-ccccCCC---CCCC-CcCC--CCCCccCCccchhhHHHHHHH
Q 001769 789 LNLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPSH-PVVSTGG---IPAP-EKSQ--PLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 789 ~s~h--K~~~~phg~GGPg~G~i~~~-~~l~~~lpg~-~~g~~g~---~~~r-e~~~--~~g~i~s~~~G~a~~~~~a~a 858 (1016)
+|+| |+++.| .+|+++++ +++.+.+... ..+.... +... .... ..+.+..+..-+.+.++.+.+
T Consensus 179 ~S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~ 252 (380)
T TIGR03588 179 FSFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLS 252 (380)
T ss_pred EecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHH
Confidence 9998 788533 23556665 3443322110 0010000 0000 0000 000000000001121121222
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcc--CCccccCCC-CceeeEEEEEecC-chhHHHHHHHHHH
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRG-LKEELDRYCDALI 924 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~--~~v~y~g~~-~~~~he~i~~~~~-~~~~ld~f~~~l~ 924 (1016)
- .+.+.++.++..++++++.+.|.+. ..+..+... .+..+-+++.+.. ....-+++.+.|+
T Consensus 253 q-----L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~ 317 (380)
T TIGR03588 253 Q-----LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALR 317 (380)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHH
Confidence 2 3447788899999999999999874 232222111 1233556666643 1124466666664
No 298
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.48 E-value=2.1e-11 Score=141.14 Aligned_cols=278 Identities=15% Similarity=0.160 Sum_probs=176.7
Q ss_pred hhHHHHHHHHHHHHHHHcC--CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 207 QGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G--~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
+|..+....+.+.+.+..| .++.++.+++|++.+...++.++. +++|+|++++-.|+.+...++ ..|++++
T Consensus 61 ~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vl~~~p~y~~~~~~~~----~~g~~~~ 133 (382)
T PRK06108 61 LGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV---GPGDEVVAVTPLWPNLVAAPK----ILGARVV 133 (382)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchHHHHH----HCCCEEE
Confidence 4444444444455555667 566788889999987776665552 378999999999998877654 4578877
Q ss_pred EeCc-----------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC----CC
Q 001769 285 VSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PP 344 (1016)
Q Consensus 285 ~vd~-----------~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l~----~p 344 (1016)
.++. +++++ +++++++|++++| |.+|.+. ++++|+++|+++|++++++ +..+..... .+
T Consensus 134 ~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D-e~y~~~~~~~~~~~~ 212 (382)
T PRK06108 134 CVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVAD-EVYERLYYAPGGRAP 212 (382)
T ss_pred EeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEe-hhhhhhccCCCCCCC
Confidence 7654 23444 5667889999888 6899775 5788999999999999994 322211111 01
Q ss_pred ------CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccC
Q 001769 345 ------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1016)
Q Consensus 345 ------g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaT 417 (1016)
....-.++++|. |.||.| |-..|++++++++++.+.... ..
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~~~~~~~~~--------------------------~~-- 260 (382)
T PRK06108 213 SFLDIAEPDDRIIFVNSFSKNWAMT----GWRLGWLVAPPALGQVLEKLI--------------------------EY-- 260 (382)
T ss_pred CHhhcCCCcCCEEEEeechhhccCc----ccceeeeeCCHHHHHHHHHHH--------------------------Hh--
Confidence 011235778886 877543 334799999887776551100 00
Q ss_pred CccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHH-
Q 001769 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY- 493 (1016)
Q Consensus 418 snicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~- 493 (1016)
...|.+.. +..++..+...+.+-++++.+++.++.+++.+.|+++.++++..+..-.-+.+.++. ..++.+.|.
T Consensus 261 ~~~~~~~~--~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~ 338 (382)
T PRK06108 261 NTSCVAQF--VQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVD 338 (382)
T ss_pred cccCCChH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHH
Confidence 01111111 112222112233445678888899999999999988733776532111112334442 678888875
Q ss_pred HcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 494 KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 494 ~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
++||.+.+. .++.+|+|++. +.+++++.++.|.
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLR 377 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 579987542 24789999997 8899998888875
No 299
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.47 E-value=7.6e-12 Score=145.48 Aligned_cols=260 Identities=17% Similarity=0.192 Sum_probs=161.8
Q ss_pred cccccccccCCCChhhhhccccc----ccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeec-CChHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTW----PSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQP-NAGAAGEY 662 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~----~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~-~sGa~ae~ 662 (1016)
.++.|+.+.+..++......... .... .|.+ .+|..++...+.+++.+..|.. ...+.. ++++++..
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 105 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGKT---KYTP---AAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALY 105 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCCC---CcCC---CCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHH
Confidence 46778888777664322211100 1122 2433 4677666666777766665643 233444 44445543
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC
Q 001769 663 AGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS 740 (1016)
Q Consensus 663 a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~Pn 740 (1016)
.+ ++.+. .+++.|++++..|+.+...++..|.+++.++.+++ +.+|+++++++++ +++++|++++|+
T Consensus 106 ~~---~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~ 174 (393)
T PRK05764 106 NA---FMALL-----DPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT---PKTKALILNSPS 174 (393)
T ss_pred HH---HHHhc-----CCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC---ccceEEEEECCC
Confidence 33 33221 25678999999998888888899999999999743 5789999999997 788999999985
Q ss_pred -CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cCcC-------CCCccCCcEEEeCccccccCCCCCCCCeEEEE
Q 001769 741 -THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-------SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPI 809 (1016)
Q Consensus 741 -~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~l~-------~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i 809 (1016)
.+|.+. .++++|+++|+++|+++++|.+..... .+.. .+...+-++++.|++|+|+.| |..+|++
T Consensus 175 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~i 250 (393)
T PRK05764 175 NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMT----GWRLGYA 250 (393)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCc----cceeEEE
Confidence 678874 368999999999999999997642111 0100 022334678888999999654 4568999
Q ss_pred EEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 810 GVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 810 ~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+.++++.+.+.... .....+++ ......+...+.. ..+-+++..+....+.+++.+.|+++
T Consensus 251 ~~~~~~~~~~~~~~------------~~~~~~~~------~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (393)
T PRK05764 251 AGPKELIKAMSKLQ------------SHSTSNPT------SIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEI 311 (393)
T ss_pred ecCHHHHHHHHHHH------------hhcccCCC------hHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 98877665442100 00011111 1111222233321 23445566666777888899999874
No 300
>PRK07777 aminotransferase; Validated
Probab=99.46 E-value=7.8e-12 Score=145.27 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=150.3
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCc--e-e-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCc
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDS--F-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~--~-~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~ 702 (1016)
.+|..++...+.+++.+.+|.+. . . +.+++|++|..++ +..+. .++++|+++...|+.+...+...|.
T Consensus 60 ~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~---~~~~~-----~~gd~vli~~p~y~~~~~~~~~~g~ 131 (387)
T PRK07777 60 GPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA---VLGLV-----EPGDEVLLIEPYYDSYAAVIAMAGA 131 (387)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH---HHHhc-----CCCCEEEEeCCCchhhHHHHHHCCC
Confidence 46777777777788877888762 2 2 4444444454333 33221 3578999998888777777888999
Q ss_pred EEEEEcCCCC---CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc--c
Q 001769 703 KIVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ--V 774 (1016)
Q Consensus 703 ~vv~v~~d~~---g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~--~ 774 (1016)
+++.++.+++ +.+|+++++++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|.+..... .
T Consensus 132 ~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~ 208 (387)
T PRK07777 132 HRVPVPLVPDGRGFALDLDALRAAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDG 208 (387)
T ss_pred EEEEeecCCccCCCcCCHHHHHHhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCC
Confidence 9999998764 4689999999987 789999999985 678864 368999999999999999997653110 0
Q ss_pred ----CcC-CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccch
Q 001769 775 ----GLT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 775 ----~l~-~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~ 849 (1016)
.+. .++..+.++++.|++|+|++| |.++|++++++++...+-... .......+ ++
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~~~~~~------------~~~~~~~~-~~--- 268 (387)
T PRK07777 209 ARHLPLATLPGMRERTVTISSAAKTFNVT----GWKIGWACGPAPLIAAVRAAK------------QYLTYVGG-AP--- 268 (387)
T ss_pred CCcccHhhCCCCcCcEEEEeechhhccCc----CceeEEEecCHHHHHHHHHHH------------hhcccCCC-CH---
Confidence 111 122245678899999999654 566899998876654331100 00000111 11
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
....+..++. .+.+-+++..+...++.+++.+.|++ ++++
T Consensus 269 --~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 309 (387)
T PRK07777 269 --FQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAGFEV 309 (387)
T ss_pred --HHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 1111222332 23344555566777888899999987 3443
No 301
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.46 E-value=3.5e-11 Score=139.98 Aligned_cols=307 Identities=11% Similarity=0.103 Sum_probs=189.8
Q ss_pred ccCCCCCCCCChHHHHHHHHh---CCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCC---CccEEEccchHHHHHH
Q 001769 170 FIGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP---MSNASLLDEGTAAAEA 243 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~---~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~---~anasl~~~~Taa~eA 243 (1016)
.+|.|..+...|..+.+++.+ ++. ...|.+ .+|..+....+++.+++.+|.. ..++.+++|++.++..
T Consensus 31 ~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 31 SLGQGVVSYPPPPEAIEALNNFLANPE-NHKYQA-----VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 467777665566666544432 222 122332 4677777788888999999974 4568888898887776
Q ss_pred HHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeec
Q 001769 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVL 313 (1016)
Q Consensus 244 ~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~ 313 (1016)
+++++. ++||+|++++-.|+.....++ ..|++++.++. +++++ +++++++|++.+| |.+|.+.
T Consensus 105 ~~~~~~---~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~ 177 (389)
T PRK05957 105 AILAIT---DPGDEIILNTPYYFNHEMAIT----MAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVY 177 (389)
T ss_pred HHHHhc---CCCCEEEEeCCCCcCHHHHHH----hcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCc
Confidence 666552 378999999988877655443 45888877654 34555 6778999999888 6899988
Q ss_pred c---HHHHHHHHHhCCcEEEEEeccccccCCC-----C----CCcccceEEEecC-ccccccCCCCCcc--eEEEEeehh
Q 001769 314 D---YGDFIKNAHANGVKVVMATDLLALTILK-----P----PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQE 378 (1016)
Q Consensus 314 d---l~eI~~lah~~GalviV~a~~~alg~l~-----~----pg~~GaDivvgs~-k~lg~P~g~GGP~--~Gfl~~~~~ 378 (1016)
+ +++|+++||++|+++++|. ..+.-... + +...+--|+++|. |.||. || .|++++.++
T Consensus 178 ~~~~~~~i~~~a~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~------~GlRiG~~~~~~~ 250 (389)
T PRK05957 178 PEALLRAVNQICAEHGIYHISDE-AYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF------ASWRIGYMVIPIH 250 (389)
T ss_pred CHHHHHHHHHHHHHcCcEEEEec-cchhccCCCCCccChhhCCCccCcEEEEecchhhccC------ccceeEEEecCHH
Confidence 6 8999999999999999943 22110101 1 1112234667776 76643 45 789998887
Q ss_pred hhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 001769 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 458 (1016)
Q Consensus 379 l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~ 458 (1016)
+++++... +.+...|++.. +..+++-+...+..-+++..+++.++.+++.
T Consensus 251 ~~~~~~~~----------------------------~~~~~~~~~~~--~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~ 300 (389)
T PRK05957 251 LLEAIKKI----------------------------QDTILICPPVV--SQYAALGALQVGKSYCQQHLPEIAQVRQILL 300 (389)
T ss_pred HHHHHHHH----------------------------HhhcccCCCcH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 77665210 11112222111 1111110011122235667777788888899
Q ss_pred HHHhcCCCe-EEcCCCCcc-EEEEecC-C--HHHHHHHHH-HcCceeecc-----c-CCeEEEEeccCCCHHHHHHHHHH
Q 001769 459 LGLKKLGTV-EVQGLPFFD-TVKVKCA-D--AHAIASAAY-KIEMNLRVV-----D-SNTVTASFDETTTLEDVDKLFIV 526 (1016)
Q Consensus 459 ~~L~~~G~~-~l~~~~~~~-~v~i~~~-~--~~~v~~~L~-~~GI~~~~~-----~-~~~lris~te~~t~edid~ll~a 526 (1016)
+.|++++++ .+.. +.-. -+.++++ + ..++.+.|. ++||.+.+. . ++.+|+++... +.+++.+.++.
T Consensus 301 ~~L~~~~~~~~~~~-~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~~ 378 (389)
T PRK05957 301 KSLGQLQDRCTLHP-ANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIER 378 (389)
T ss_pred HHHHhcCCCccccC-CCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHHH
Confidence 999887533 3322 2111 1223433 2 778999987 579987542 1 35799999754 56666666666
Q ss_pred Hh
Q 001769 527 FA 528 (1016)
Q Consensus 527 L~ 528 (1016)
|.
T Consensus 379 l~ 380 (389)
T PRK05957 379 LV 380 (389)
T ss_pred HH
Confidence 64
No 302
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.46 E-value=7.4e-12 Score=143.64 Aligned_cols=268 Identities=19% Similarity=0.261 Sum_probs=173.2
Q ss_pred HHHHHHHHHcC------CCCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 215 NFQTMIADLTG------LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 215 e~q~~iA~L~G------~~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
++++.+|++++ .+.. ++.+..|+.++..++...++. +++++|++++-.|+.+...++. .|++++.++
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~--~~~~~vlv~~P~y~~~~~~~~~----~g~~~~~~~ 121 (363)
T PF00155_consen 48 ELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI--NPGDTVLVPDPCYPSYIEAARL----LGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS--STTSEEEEEESSSTHHHHHHHH----TTSEEEEEE
T ss_pred HHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc--cccccceecCCccccccccccc----cCceeeecc
Confidence 46678888888 6666 677777777666665555522 2789999999999999998764 366666555
Q ss_pred ----------chhhhc-cCC------CEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCCCCC-
Q 001769 288 ----------LKDIDY-KSG------DVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILKPPG- 345 (1016)
Q Consensus 288 ----------~~~L~~-l~~------~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~~pg- 345 (1016)
+++|++ +++ ++.+|++.+| |.+|.+.+ +.+|+++|+++|++++++ +..+......++
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~D-e~y~~~~~~~~~~ 200 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVD-EAYSDLIFGDPDF 200 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEE-ETTTTGBSSSSHT
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeee-eceeccccCCCcc
Confidence 445655 433 5688888898 68998765 556666699999999994 343332222111
Q ss_pred -------cccc-eEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccccccccccc
Q 001769 346 -------ELGA-DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1016)
Q Consensus 346 -------~~Ga-Divvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRReka 416 (1016)
+.+. .|++.|. |.||.| |--.|++.+.+++.+.+.. - .
T Consensus 201 ~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~----------------------------~-~ 247 (363)
T PF00155_consen 201 GPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRR----------------------------F-Q 247 (363)
T ss_dssp HHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHH----------------------------H-H
T ss_pred Ccccccccccccceeeeecccccccc----ccccccccchhhhhhhhhh----------------------------c-c
Confidence 1123 3777776 878654 1236899998877766510 0 0
Q ss_pred CCccchhhHHHHHHHHHHHH-HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC--HHHHHHH
Q 001769 417 TSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD--AHAIASA 491 (1016)
Q Consensus 417 TsnicT~~~l~a~~Aa~y~~-~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~--~~~v~~~ 491 (1016)
++..++ ......++.++.. ....+-++++.+++.++.+++.+.|++.| +.+..+ .++ +.+..+. ..++.+.
T Consensus 248 ~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 323 (363)
T PF00155_consen 248 RSGLSS-SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPEAGFF--LWVRLDPNDAEELAQE 323 (363)
T ss_dssp HHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHSBSSE--EEEEESHHHHHHHHHH
T ss_pred cccccc-chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeeccCccE--EEEEcccchHHHHHHH
Confidence 011111 2222222222111 10111457788888999999999999887 887642 232 1222232 5789999
Q ss_pred HHHc-Cceeecc----cCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 492 AYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 492 L~~~-GI~~~~~----~~~~lris~te~~t~edid~ll~aL 527 (1016)
|.++ ||.+.+. .++.+|+++ ...+++++++++++|
T Consensus 324 L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 324 LLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred HHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 9988 9987542 267899999 889999999999875
No 303
>PRK08960 hypothetical protein; Provisional
Probab=99.46 E-value=1.1e-11 Score=144.13 Aligned_cols=213 Identities=13% Similarity=0.143 Sum_probs=137.7
Q ss_pred ccccccccccCCCChhhhhccccccccc-ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeecCChHHHHHHHH
Q 001769 589 HSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGL 665 (1016)
Q Consensus 589 ~~~i~LGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l 665 (1016)
..++.|+.+.+.+++............. ...-|.| .+|..++...+.+++.+.+|.+ ...+..++|++. +..
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~--al~ 106 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTA---ARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSG--ALL 106 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCC---CCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHH--HHH
Confidence 3467899887765432211111000000 1112333 4677666666677776666654 334555555431 233
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCC
Q 001769 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STH 742 (1016)
Q Consensus 666 ~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~ 742 (1016)
++++.+. .++++|+++++.|..+...+...|.+++.++++.+ +.+|+++++++++ ++++++++.+| |.+
T Consensus 107 ~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPt 178 (387)
T PRK08960 107 LASSLLV-----DPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANPT 178 (387)
T ss_pred HHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCCC
Confidence 3344331 36789999999998888888889999999999765 4789999999987 77889999999 568
Q ss_pred cccc--ccHHHHHHHHHHcCcEEEEEccccccc-cC-cCCCCccCCc-EEEeCccccccCCCCCCCCeEEEEEEcccccc
Q 001769 743 GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTSPGYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP 817 (1016)
Q Consensus 743 G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~-l~~pg~~GaD-i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~ 817 (1016)
|... .++++|+++|+++|+++++|.+...-. .. .........+ +++.|++|.|++| |..+|++++++++.+
T Consensus 179 G~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRiG~~~~~~~~~~ 254 (387)
T PRK08960 179 GTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMT----GWRLGWLVAPPAAVP 254 (387)
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCc----ccEEEEEEcCHHHHH
Confidence 8876 246778888999999999997642110 00 0111122234 5677999998544 567999999877655
Q ss_pred c
Q 001769 818 F 818 (1016)
Q Consensus 818 ~ 818 (1016)
.
T Consensus 255 ~ 255 (387)
T PRK08960 255 E 255 (387)
T ss_pred H
Confidence 4
No 304
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.45 E-value=1.7e-11 Score=143.20 Aligned_cols=276 Identities=18% Similarity=0.188 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc----cC---CCCEEE-EcCCCCHHHHHHHHHh-------
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ----KG---KKKTFI-IASNCHPQTIDICITR------- 275 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~----~~---~gd~Vl-vs~~~Hps~~~~l~~~------- 275 (1016)
+...++++.+++++|.+ .+.++++||.|+|+++.+.+.. ++ .+++|+ .+...|.++...+..-
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 35567888999999975 4888999999999877655321 01 234555 5556787766554210
Q ss_pred -hcCCCeEEEE---eCchhhhc-cCCCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEecccc-ccCCCC-
Q 001769 276 -ADGFDIKVVV---SDLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP- 343 (1016)
Q Consensus 276 -a~~~gi~v~~---vd~~~L~~-l~~~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~a-lg~l~~- 343 (1016)
.......+.. .|++++++ +.+++++|++..| |..|.+.| +++|.++|+++|++++++ +..+ +|-...
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D-Ev~~g~g~~g~~ 239 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD-EIQTGLGRTGKL 239 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-chhhCCCCCchH
Confidence 0111123333 34567777 7788999999887 67899886 999999999999999994 3333 332110
Q ss_pred ----CCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCc
Q 001769 344 ----PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (1016)
Q Consensus 344 ----pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsn 419 (1016)
......|+++. +|+|++ |.-..|++.+++++++.+... .. + +.
T Consensus 240 ~~~~~~g~~~D~~~~-~K~l~g----g~~~ig~v~~~~~~~~~l~~~----------~~-----------------~-~t 286 (401)
T PRK00854 240 LAEEHEGIEADVTLI-GKALSG----GFYPVSAVLSNSEVLGVLKPG----------QH-----------------G-ST 286 (401)
T ss_pred hHHhhcCCCCCEEEe-cccccC----CccCeEEEEEcHHHHhcccCC----------CC-----------------C-CC
Confidence 01124688876 488852 221257777888877655210 00 0 01
Q ss_pred cchhhH-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc----CCCCccEEEEecC-C-HHHHHHHH
Q 001769 420 ICTAQA-LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ----GLPFFDTVKVKCA-D-AHAIASAA 492 (1016)
Q Consensus 420 icT~~~-l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~----~~~~~~~v~i~~~-~-~~~v~~~L 492 (1016)
+|.+.. ..+..+++ ..+..++ +.++..++.+++.+.|++++ .... +...+-.+.+..+ . ..++.+.|
T Consensus 287 ~~~~~~~~aa~~a~L--~~l~~~~---~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L 360 (401)
T PRK00854 287 FGGNPLACAVARAAL--KVLTEEG---MIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGARQYCEAL 360 (401)
T ss_pred CCcCHHHHHHHHHHH--HHHHHcC---HHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHHHHHHHH
Confidence 121111 11222222 3332222 45677788899999998875 3221 1111112333222 2 67899999
Q ss_pred HHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 493 ~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++||.+.....+.||++++..+|++||+++++.|.
T Consensus 361 ~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 361 KERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 999999876556899999999999999999999985
No 305
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.45 E-value=4.9e-12 Score=147.18 Aligned_cols=261 Identities=16% Similarity=0.194 Sum_probs=160.8
Q ss_pred cccccccccCCCChhhhhccccccccc-ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeecCCh-HHHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGL 665 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~~sG-a~ae~a~l 665 (1016)
.++.|+.|.+.+++...........+. ....|.| .+|..++...+.+++.+.+|.. ...+..++| +++. .
T Consensus 34 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al---~ 107 (391)
T PRK08361 34 NVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTP---NAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT---Y 107 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH---H
Confidence 357788887776543222111000000 1122444 4677777777777777666654 334444444 4443 3
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 666 ~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
++++.+. .+++.|++++..|......+...|++++.++++++ +.+|+++++++++ +++++|++++|+ .+
T Consensus 108 ~~~~~l~-----~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPt 179 (391)
T PRK08361 108 LAFESLL-----EEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPT 179 (391)
T ss_pred HHHHHhc-----CCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCC
Confidence 3333321 35689999999888888888899999999999764 4699999999997 789999999995 68
Q ss_pred cccccc---HHHHHHHHHHcCcEEEEEccccccc-cCc-CCC-C--ccCCcEEEeCccccccCCCCCCCCeEEEEEEccc
Q 001769 743 GVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSP-G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 814 (1016)
Q Consensus 743 G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~-~~l-~~p-g--~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~ 814 (1016)
|.+. | +++|+++|+++|+++++|.+...-. .+. ..+ . +...++++.|++|+|+.| |..+|+++++++
T Consensus 180 G~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~----GlRiG~~~~~~~ 254 (391)
T PRK08361 180 GATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT----GWRLGFVIAPEQ 254 (391)
T ss_pred CcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc----HhhhhhhccCHH
Confidence 9887 6 8999999999999999997752111 000 001 1 123467889999999543 345899998876
Q ss_pred ccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhCh--hhHHHHHHHHHHHHHHHHHHHhc
Q 001769 815 LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 815 l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~--eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+...+-. . .....+++++ .....+...|.. +. +.+++..+...++.+++.+.|++
T Consensus 255 ~~~~~~~-~-----------~~~~~~~~~~------~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~ 311 (391)
T PRK08361 255 VIKDMIK-L-----------HAYIIGNVAS------FVQIAGIEALRS-KESWKAVEEMRKEYNERRKLVLKRLKE 311 (391)
T ss_pred HHHHHHH-H-----------HhhhccCCCh------HHHHHHHHHhcC-CcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6543310 0 0001112221 111112222221 21 34666677777778888888886
No 306
>PRK09105 putative aminotransferase; Provisional
Probab=99.45 E-value=2.9e-11 Score=139.86 Aligned_cols=264 Identities=14% Similarity=0.094 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|+..|.++.++.+++|++.++..++.++. ++||+|++++-.|+.+...++ ..|++++.++.+
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~---~~gd~Vli~~P~y~~~~~~~~----~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT---SPTAGLVTADPTYEAGWRAAD----AQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc---CCCCEEEEeCCChHHHHHHHH----HcCCeEEEecCCCCC
Confidence 4457788999999999999999999988777666652 378999999999998877643 468888887652
Q ss_pred -----hhhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEeccccccCCCCCC---cccceEEEe-cC-
Q 001769 290 -----DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILKPPG---ELGADIVVG-SA- 356 (1016)
Q Consensus 290 -----~L~~l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~--~GalviV~a~~~alg~l~~pg---~~GaDivvg-s~- 356 (1016)
++++..+++++|++.+| |.+|.+.+.++|.++++. +|++++++.-...+....+.. +.+-++++. |.
T Consensus 153 ~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 153 AHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred CCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEeccc
Confidence 23222356888889998 689999988888877654 488888843111221111111 124455554 54
Q ss_pred ccccccCCCCCcc--eEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHH
Q 001769 357 QRFGVPMGYGGPH--AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1016)
Q Consensus 357 k~lg~P~g~GGP~--~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y 434 (1016)
|.||. || .||+++.+++++.+-. - ...+.+ .. +..+++
T Consensus 233 K~~g~------~GlRiG~~v~~~~~i~~l~~----------------------------~-~~~~~~-~~---~~~aa~- 272 (370)
T PRK09105 233 KLYGM------AGMRLGLAAARPDLLAKLAR----------------------------F-GHNPLP-VP---AAAAGL- 272 (370)
T ss_pred HhhcC------CccceeeeecCHHHHHHHHh----------------------------c-CCCCcC-HH---HHHHHH-
Confidence 76654 44 6899888777665410 0 111111 11 112222
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC-HHHHHHHHHHcCceeecc---cCCeEEEE
Q 001769 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV---DSNTVTAS 510 (1016)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~---~~~~lris 510 (1016)
..+..++-+++..++..++.+++.+.|++.| +++..+ .-.-+.++.+. ..++.+.|.++||.++.. .++.+|++
T Consensus 273 ~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~-~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris 350 (370)
T PRK09105 273 ASLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPS-QANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVT 350 (370)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCC-CCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEE
Confidence 1122234456667778888889999999887 776532 11223355543 788999999999988432 25789999
Q ss_pred eccCCCHHHHHHHHHHHh
Q 001769 511 FDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 511 ~te~~t~edid~ll~aL~ 528 (1016)
+. +++++++|+++|.
T Consensus 351 ~~---~~~~~~~l~~al~ 365 (370)
T PRK09105 351 VG---SEEEMAAFRSAFA 365 (370)
T ss_pred cC---CHHHHHHHHHHHH
Confidence 77 6888999999885
No 307
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.45 E-value=9.8e-12 Score=145.47 Aligned_cols=230 Identities=16% Similarity=0.163 Sum_probs=150.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC--c-eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~--~-~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++.+.+.+++++..|.+ . ..+..++|++. +..++++.+. .++|+|+++.+.|..+...+...|.+
T Consensus 77 ~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~--al~~~~~~l~-----~~Gd~Vlv~~P~y~~~~~~~~~~g~~ 149 (405)
T PRK06207 77 YRGDADIRELLAARLAAFTGAPVDAADELIITPGTQG--ALFLAVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGE 149 (405)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH--HHHHHHHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCE
Confidence 4677788888889999998964 2 34555555432 2233333321 36789999999888888888899999
Q ss_pred EEEEcCC-----CCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-c
Q 001769 704 IVSVGTD-----AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-V 774 (1016)
Q Consensus 704 vv~v~~d-----~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~ 774 (1016)
++.++++ .+..+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|.+...-. .
T Consensus 150 v~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~ 226 (405)
T PRK06207 150 MVPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD 226 (405)
T ss_pred EEEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 9999886 246799999999997 678999999995 688887 258889999999999999997653111 0
Q ss_pred C--cCCCCccCC--c--EEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccc
Q 001769 775 G--LTSPGYIGA--D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1016)
Q Consensus 775 ~--l~~pg~~Ga--D--i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G 848 (1016)
+ ......+.. | +++.|++|+|++| |..+|++++++++...+-.. .....++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~~--------------~~~~~~~~~~-- 286 (405)
T PRK06207 227 GTSYTHLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEKL--------------QAIVSLRAAG-- 286 (405)
T ss_pred CCCCCchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHHH--------------HhHhccCCCH--
Confidence 1 011111222 2 6778999999766 56799999887665543110 0001111111
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
....++..+|.. +..-+.+..+....+.+++.+.|++.
T Consensus 287 --~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~ 324 (405)
T PRK06207 287 --YSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGV 324 (405)
T ss_pred --HHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 112222333432 22225566666777778888888763
No 308
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.45 E-value=3.9e-12 Score=136.49 Aligned_cols=233 Identities=16% Similarity=0.176 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHhCCCce--eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH----HHhCCcE
Q 001769 630 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMK 703 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~~--~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~----a~~~G~~ 703 (1016)
..+++.++.+-+..+|...+. .+..++|..|.++++.-+. .++|+|++-.. |.+... ++..|++
T Consensus 48 ~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~--G~wg~ra~D~~~r~ga~ 117 (385)
T KOG2862|consen 48 FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLL--------EPGDNVLVVST--GTWGQRAADCARRYGAE 117 (385)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEe--chHHHHHHHHHHhhCce
Confidence 456777888888888877643 4667788878877655332 36788888654 444432 5688999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCcccccc-HHHHHHHHHHcCcEEEEEccccccccCc-CCCC
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG-IDEICKIIHDNGGQVYMDGANMNAQVGL-TSPG 780 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~d-i~~I~~ia~~~g~lv~vDga~~~a~~~l-~~pg 780 (1016)
|..|+.+..+.+.++.+++++.+| +.++|++++. +.+|+.+ | ++.+.++||+|+++++||++.. +++. ....
T Consensus 118 V~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q-~~~~~~g~lc~k~~~lllVD~VaS--lggt~F~mD 192 (385)
T KOG2862|consen 118 VDVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQ-DLLAISGELCHKHEALLLVDTVAS--LGGTEFEMD 192 (385)
T ss_pred eeEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccc-hHHHHHHHHhhcCCeEEEEechhh--cCCccceeh
Confidence 999998888889999999999864 4567888886 5789998 6 7778899999999999998754 3432 3567
Q ss_pred ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCcc-------cc--CCCCCCC--C--cCCCCCCccCCcc
Q 001769 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-------VS--TGGIPAP--E--KSQPLGTIAAAPW 847 (1016)
Q Consensus 781 ~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~-------g~--~g~~~~r--e--~~~~~g~i~s~~~ 847 (1016)
+||+|++....+|.++.| ||+++|+.+++....+..+-- .. -+.++.- + .-..|..+
T Consensus 193 ewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv----- 262 (385)
T KOG2862|consen 193 EWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPV----- 262 (385)
T ss_pred hhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcH-----
Confidence 999999999999999644 688899888765444322211 00 0111100 0 01112222
Q ss_pred chhhHHHHH-HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCC
Q 001769 848 GSALILPIS-YTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYP 891 (1016)
Q Consensus 848 G~a~~~~~a-~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~ 891 (1016)
.++-+ -+.|..+-.|||+++.+++.++++++...|++ +.+
T Consensus 263 ----~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq 304 (385)
T KOG2862|consen 263 ----QLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQ 304 (385)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 22222 35677788999999999999999999999998 443
No 309
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.45 E-value=9.6e-12 Score=145.27 Aligned_cols=224 Identities=18% Similarity=0.175 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC
Q 001769 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (1016)
Q Consensus 631 ~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d 710 (1016)
.+...++++.+++++|.+. .+..++|++++++++.++..+ .+++.|+.+...|++....+...|.++..++.
T Consensus 89 ~~~~~~Le~~la~~~g~~~-~l~~~sG~~an~~ai~~l~~~------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~- 160 (402)
T TIGR01821 89 NIPHVELEAELADLHGKES-ALVFTSGYVANDATLATLAKI------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH- 160 (402)
T ss_pred cHHHHHHHHHHHHHhCCCe-EEEECchHHHHHHHHHHhhCC------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-
Confidence 3455689999999999764 577888887776555544321 13566666667787766666778888776654
Q ss_pred CCCCCCHHHHHHHHHcCCC-CEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCc------CCCC-c
Q 001769 711 AKGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL------TSPG-Y 781 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~-~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l------~~pg-~ 781 (1016)
.|+++++++++...+ ++++|++++|+ .+|.+. |+++|+++|+++|+++++|.++..+..+- ..++ .
T Consensus 161 ----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~ 235 (402)
T TIGR01821 161 ----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM 235 (402)
T ss_pred ----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCC
Confidence 488999998864333 68999999985 679987 89999999999999999999986443221 0111 1
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
..+|+++.++.|.|+. +| |++++++++.+.+.... . +.+.+ ..+++..++.+.+.|.
T Consensus 236 ~~~div~~t~sKa~g~------~G-G~i~~~~~~~~~l~~~~-------------~--~~~~t-~~~~~~~~aaa~aaL~ 292 (402)
T TIGR01821 236 HRIDIIEGTLAKAFGV------VG-GYIAASRKLIDAIRSYA-------------P--GFIFT-TSLPPAIAAGATASIR 292 (402)
T ss_pred CCCeEEEEechhhhcc------CC-ceeecCHHHHHHHHHhC-------------c--Cceec-CcCCHHHHHHHHHHHH
Confidence 2368888899999853 22 67777766554431100 0 00000 0112233444455565
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
.+-.+ ..+.++..++++++.++|++ ++++
T Consensus 293 ~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~ 322 (402)
T TIGR01821 293 HLKES--QDLRRAHQENVKRLKNLLEALGIPV 322 (402)
T ss_pred HhhcC--HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 54333 34455566889999999987 3443
No 310
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.44 E-value=5.1e-12 Score=146.39 Aligned_cols=266 Identities=15% Similarity=0.099 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
...++++++++.+|.+.+ +..++|++|...++.++ +.+++++|+++...|.+....+...|++++.+++|++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~al~~~l~~~-------~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~ 103 (375)
T PRK11706 32 FTRRCQQWLEQRFGSAKV-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (375)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHh-------CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 345778889999998754 55667766543322222 1236789999999887777778889999999999877
Q ss_pred -CCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCC-CCccCCcEEEeC
Q 001769 713 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (1016)
Q Consensus 713 -g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~-pg~~GaDi~~~s 790 (1016)
+.+|+++++++++ ++|++|+++++ +|... |+++|.++|+++|++++.|+++.++...-.+ .+.+ .|+.++|
T Consensus 104 ~~~~d~~~le~~i~---~~tk~i~~~~~--~G~~~-~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~-~~~~~~S 176 (375)
T PRK11706 104 TMNIDETLIEAAIT---PKTRAIVPVHY--AGVAC-EMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTI-GHIGCFS 176 (375)
T ss_pred cCCcCHHHHHHhcC---CCCeEEEEeCC--CCCcc-CHHHHHHHHHHcCCEEEEECccccccccCCeeeecC-cCEEEEe
Confidence 4799999999998 78999998764 68776 8999999999999999999988644321112 2333 5888999
Q ss_pred cc--ccccCCCCCCCCeEEEEEEcccccccCCCCc-cccCCCCCCCCc-CC-CCCCccCCccchhhHHHHHHHHHHHhCh
Q 001769 791 LH--KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP-VVSTGGIPAPEK-SQ-PLGTIAAAPWGSALILPISYTYIAMMGS 865 (1016)
Q Consensus 791 ~h--K~~~~phg~GGPg~G~i~~~~~l~~~lpg~~-~g~~g~~~~re~-~~-~~g~i~s~~~G~a~~~~~a~a~l~~lG~ 865 (1016)
+| |.++.+ -|++++..++++...+.... .|.......+.. .. ....+..++.-+...++...+-+
T Consensus 177 f~~~K~l~~g-----~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql----- 246 (375)
T PRK11706 177 FHETKNYTAG-----EGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQL----- 246 (375)
T ss_pred CCCCcccccc-----CCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHH-----
Confidence 88 988532 22344443444443221000 000000000000 00 00001111111222222222223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC---CccccC-CC--CceeeEEEEEecCchhHHHHHHHHHH
Q 001769 866 KGLTEASKIAILNANYMAKRLEKHY---PILFRG-VN--GTVAHEFIVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 866 eGl~~~~~~~~~nA~yla~~L~~~~---~v~y~g-~~--~~~~he~i~~~~~~~~~ld~f~~~l~ 924 (1016)
+-+.+..++-.++++++.+.|++.. .+.++- .+ .+..|-+.+.+... ..-++|.+.|+
T Consensus 247 ~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~l~~~L~ 310 (375)
T PRK11706 247 EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-EDRSALINFLK 310 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-CCHHHHHHHHH
Confidence 2366777788889999999997632 122221 11 13345566666432 23456666654
No 311
>PRK07682 hypothetical protein; Validated
Probab=99.44 E-value=5.7e-12 Score=145.88 Aligned_cols=261 Identities=13% Similarity=0.158 Sum_probs=165.8
Q ss_pred cccccccccCCCChhhhhcc--cc-cccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCCh-HHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMP--VT-WPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEY 662 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~--~~-~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sG-a~ae~ 662 (1016)
++|.|+.+.+.+.+...... .. ... .++.|.| .+|..++...+.+++.+.+|.+ .. .+..++| +++.
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al- 94 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQ--GYTSYTA---NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL- 94 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhc--CCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH-
Confidence 46889988877654321111 00 111 1233444 4688888888888888877764 22 3445555 4444
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC
Q 001769 663 AGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS 740 (1016)
Q Consensus 663 a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn 740 (1016)
.++++.+. ++++.|++++..|+.+...+++.|.+++.++.+. ++.+|+++++++++ +++++|++++|+
T Consensus 95 --~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~ 164 (378)
T PRK07682 95 --DVAMRAII-----NPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPN 164 (378)
T ss_pred --HHHHHHhC-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCC
Confidence 33344331 3578999999988877777888999999998763 46899999999997 789999999995
Q ss_pred -CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cC-cCC----CCccCCcEEEeCccccccCCCCCCCCeEEEEEE
Q 001769 741 -THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1016)
Q Consensus 741 -~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~-l~~----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~ 811 (1016)
.+|.+. .++++|+++|+++|+++++|.+...-. .+ ... ++...-.+++.|++|.|++| |.++|++++
T Consensus 165 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlR~G~~~~ 240 (378)
T PRK07682 165 NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMT----GWRLGFIAA 240 (378)
T ss_pred CCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccCh----hhhhhhhhc
Confidence 678775 258999999999999999997643111 00 000 11112357788999999654 456899999
Q ss_pred cccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 812 ~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
++++.+.+-... .....+. +.....++..+|. -|.+-+++..+...++.+++.+.|++.
T Consensus 241 ~~~~i~~l~~~~--------------~~~~~~~----~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~ 299 (378)
T PRK07682 241 PVYFSEAMLKIH--------------QYSMMCA----PTMAQFAALEALR-AGNDDVIRMRDSYRKRRNFFVTSFNEI 299 (378)
T ss_pred CHHHHHHHHHHH--------------HhhccCC----CHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 887665431100 0001111 1122222334443 243446666777788889999999873
No 312
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=3.5e-11 Score=138.22 Aligned_cols=264 Identities=13% Similarity=0.065 Sum_probs=174.4
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----- 288 (1016)
.++++.+|+++|.+..++.+++|++.++..++.++. ++||+|+++.-.++.+...++ ..|++++.++.
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~---~~gd~v~~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~ 139 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL---NPGTNTVMAEPTFSQYRHNAI----IEGAEVREVPLKDGGH 139 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh---CCCCEEEEcCCCHHHHHHHHH----HcCCeEEEEecCCCCc
Confidence 457789999999988889999999888776655542 278999999988888766643 35777777654
Q ss_pred --hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEeccccccCCC----CC----CcccceEEEe
Q 001769 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILK----PP----GELGADIVVG 354 (1016)
Q Consensus 289 --~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~--~GalviV~a~~~alg~l~----~p----g~~GaDivvg 354 (1016)
+++++ +++++++|++.+| |.+|.+.+.++|.++++. +|++++++ +........ ++ ...+-.|+++
T Consensus 140 d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 218 (359)
T PRK03158 140 DLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD-EAYYEYVTAEDYPDTLPLLEKYENLIVLR 218 (359)
T ss_pred CHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE-CchHhhcCCcccccHHHHHHhcCCEEEEE
Confidence 34544 6678899998888 689999999999998887 58888884 332211111 11 1234567888
Q ss_pred cC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 355 s~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
|. |.||.| |--.||+.+++++++.+- +.+.+ .+++......++.+
T Consensus 219 S~SK~~g~~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~--~~~~~~~q~~~~~~ 264 (359)
T PRK03158 219 TFSKAYGLA----ALRVGYGIASEELIEKLN----------------------------IARPP--FNTTRIAQYAAIAA 264 (359)
T ss_pred echHhhcCc----chhhehhcCCHHHHHHHH----------------------------HhcCC--CCCCHHHHHHHHHH
Confidence 86 877543 222488888877766541 00111 11212211111111
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceeecc----cCCeE
Q 001769 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV----DSNTV 507 (1016)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~----~~~~l 507 (1016)
+ ...+-++++.++..++.+++.+.|++.| +.+..+ ..| +.+..+. ..++.+.|.++||.+... .++.+
T Consensus 265 -l--~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~--i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~i 338 (359)
T PRK03158 265 -L--EDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNF--IFVDTGRDANELFEALLKKGYIVRSGAALGFPTGV 338 (359)
T ss_pred -h--cCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcE--EEEECCCCHHHHHHHHHHCCeEEeeCCCCCCCCeE
Confidence 1 1122245666666777778888888876 776532 222 3344443 788999999999988652 25789
Q ss_pred EEEeccCCCHHHHHHHHHHHh
Q 001769 508 TASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 508 ris~te~~t~edid~ll~aL~ 528 (1016)
|+++. +.+|+++++++|.
T Consensus 339 Ri~~~---~~~~~~~l~~al~ 356 (359)
T PRK03158 339 RITIG---LKEQNDKIIELLK 356 (359)
T ss_pred EEecC---CHHHHHHHHHHHH
Confidence 99977 8999999999985
No 313
>PRK12414 putative aminotransferase; Provisional
Probab=99.43 E-value=4e-12 Score=147.60 Aligned_cols=224 Identities=13% Similarity=0.145 Sum_probs=149.7
Q ss_pred HHHHHHHHhccccCCCccccccccccCCCChhhhhccccccccc-ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCc--
Q 001769 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (1016)
Q Consensus 573 ~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~-- 649 (1016)
+.+.+.++.+.. .+|.|+.+.+.+++.......-..... ....|.| .+|..++..++++++++.+|.+.
T Consensus 18 ~~~~~~~~~~~~-----~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~l~~~~g~~~~~ 89 (384)
T PRK12414 18 IFTVIGQLAAQH-----DALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAP---MAGIAALREALAEKTERLYGARYDP 89 (384)
T ss_pred HHHHHHHHHHhC-----CeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 445555544322 467898888776543322211000000 1223444 57888899999999999999852
Q ss_pred -ee-eecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHc
Q 001769 650 -FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (1016)
Q Consensus 650 -~~-l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~g~iD~~~L~~~i~~ 726 (1016)
.. +.+++|++|.. ++++.+. .++++|++++..|..+...++..|.+++.+++++ ++.+|+++|+++++
T Consensus 90 ~~~i~it~g~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~- 160 (384)
T PRK12414 90 ASEVTVIASASEGLY---AAISALV-----HPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT- 160 (384)
T ss_pred CCcEEEECChHHHHH---HHHHHhc-----CCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-
Confidence 23 44444444443 3333321 3578999999988777777888999999999875 46799999999997
Q ss_pred CCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccC-cCCC-Cc----cCCcEEEeCcccccc
Q 001769 727 NRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LTSP-GY----IGADVCHLNLHKTFC 796 (1016)
Q Consensus 727 ~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~-l~~p-g~----~GaDi~~~s~hK~~~ 796 (1016)
+++++|++++|+ .+|.+. .++++|+++|+++|+++++|.+... ...+ ...| .. .+--+++.|++|.|+
T Consensus 161 --~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~ 238 (384)
T PRK12414 161 --PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYH 238 (384)
T ss_pred --cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEeccccccc
Confidence 789999999985 678863 3799999999999999999987531 1111 0011 11 112378889999996
Q ss_pred CCCCCCCCeEEEEEEcccccccC
Q 001769 797 IPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 797 ~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
+| |.++|++++.+++...+
T Consensus 239 ~p----GlRiG~~v~~~~l~~~l 257 (384)
T PRK12414 239 VT----GWRVGYCLAPAELMDEI 257 (384)
T ss_pred Cc----cceEEEEecCHHHHHHH
Confidence 55 57799999987765543
No 314
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.43 E-value=3.3e-12 Score=147.61 Aligned_cols=167 Identities=11% Similarity=0.106 Sum_probs=115.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhC-CcE
Q 001769 625 DQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMC-GMK 703 (1016)
Q Consensus 625 e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~-G~~ 703 (1016)
....|..+.+.++++.+++++|.+.+ +.+++|+.++.+. +..+ . ++++.|++...+|++....+... |..
T Consensus 49 ~~~~g~~~~~~~~e~~la~~~~~~~~-l~~~sG~~a~~~~---~~~~---~--~~~d~ii~d~~~H~sv~~~~~~~~~~~ 119 (370)
T PRK05937 49 RAILGPSSLLDDLEHKIAHFHGAPEA-FIVPSGYMANLGL---CAHL---S--SVTDYVLWDEQVHISVVYSLSVISGWH 119 (370)
T ss_pred CcccCChHHHHHHHHHHHHHhCCCeE-EEECChHHHHHHH---HHHh---C--CCCCEEEEEhhhhHHHHHHHHHcCCce
Confidence 55667778899999999999999765 7788887655322 2111 1 24578888889998776665544 433
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCC---CCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 704 IVSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 704 vv~v~~d~~g~iD~~~L~~~i~~~~---~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
+. ++ ..|+++|++++++.. +++.+|++++++ .+|.+. |+++|+++||++|++++||+++..+..+..--
T Consensus 120 ~~-~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~~~livDea~~~G~~g~~g~ 192 (370)
T PRK05937 120 QS-FR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGK 192 (370)
T ss_pred EE-ec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCC
Confidence 33 33 379999999997421 346677788875 689997 89999999999999999999997554332110
Q ss_pred ---CccCC---cEEEeCccccccCCCCCCCCeEEEEEEcc
Q 001769 780 ---GYIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1016)
Q Consensus 780 ---g~~Ga---Di~~~s~hK~~~~phg~GGPg~G~i~~~~ 813 (1016)
..+++ |++..+++|.++ ++|+|+++.++
T Consensus 193 g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~ 226 (370)
T PRK05937 193 GFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE 226 (370)
T ss_pred chHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH
Confidence 12342 356677889873 34566665543
No 315
>PRK08912 hypothetical protein; Provisional
Probab=99.43 E-value=1.9e-11 Score=142.09 Aligned_cols=211 Identities=13% Similarity=0.112 Sum_probs=139.5
Q ss_pred cccccccccCCCChhhhhccccccccc-ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCCh-HHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAG 664 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sG-a~ae~a~ 664 (1016)
..+.||.|.+..+...+.......... ...-|.+ .+|..++...+.+++.+.+|.+ .. .+..++| ++|.
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al--- 100 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPP---MMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL--- 100 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH---
Confidence 357788776655432211111000000 1122433 5777777777777777777764 32 4444444 4443
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
.++++.+. +++++|+++...|+.+...+...|.+++.+++++ ++.+|+++++++++ +++++|++++|+ .+
T Consensus 101 ~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPt 172 (387)
T PRK08912 101 AAALLALV-----EPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS---PRTKAVLLNNPLNPA 172 (387)
T ss_pred HHHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC---ccceEEEEeCCCCCc
Confidence 23333321 3578999999988888788899999999999975 57899999999997 789999999984 68
Q ss_pred cccc--ccHHHHHHHHHHcCcEEEEEccccccc-cC-----cC-CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcc
Q 001769 743 GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-----LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1016)
Q Consensus 743 G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~-----l~-~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~ 813 (1016)
|.+. .++++|+++|+++|+++++|.+...-. .+ +. .++..+-++++.|++|.|++| |..+|++++++
T Consensus 173 G~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~ 248 (387)
T PRK08912 173 GKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLT----GWKVGFVCAAP 248 (387)
T ss_pred CcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCc----CceeEEEecCH
Confidence 8876 247889999999999999997752110 00 10 112224568899999998654 56799999987
Q ss_pred ccccc
Q 001769 814 HLAPF 818 (1016)
Q Consensus 814 ~l~~~ 818 (1016)
++.+.
T Consensus 249 ~~~~~ 253 (387)
T PRK08912 249 PLLRV 253 (387)
T ss_pred HHHHH
Confidence 66543
No 316
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.43 E-value=9.9e-12 Score=143.33 Aligned_cols=262 Identities=19% Similarity=0.177 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC-C
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 711 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d-~ 711 (1016)
...++++.+++.+|.+.+ +.++||+.|.++++.++ |.+++++|++|.....+........|.+++++++| +
T Consensus 26 ~~~~fE~~~a~~~g~~~~-~~~~sgt~Al~~al~~l-------~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYA-VAVSSGTSALHLALRAL-------GLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSEE-EEESSHHHHHHHHHHHT-------TGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChhHHHHHHHHhc-------CCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCC
Confidence 466899999999998765 66788887766555543 22468899999875544555567899999999999 5
Q ss_pred CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-CCCCccCCcEEEeC
Q 001769 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 790 (1016)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~~pg~~GaDi~~~s 790 (1016)
++.+|+++++++|+ ++|++|++++ ..|... |+++|.++|+++|+.+|-|+|+.++...- ...|.+| |+.++|
T Consensus 98 ~~~id~~~~~~~i~---~~t~ai~~~h--~~G~~~-d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g-d~~~fS 170 (363)
T PF01041_consen 98 TLNIDPEALEKAIT---PKTKAILVVH--LFGNPA-DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG-DIAIFS 170 (363)
T ss_dssp TSSB-HHHHHHHHH---TTEEEEEEE---GGGB----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS-SEEEEE
T ss_pred cCCcCHHHHHHHhc---cCccEEEEec--CCCCcc-cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC-CceEec
Confidence 69999999999999 8999999987 668887 99999999999999999999986543211 2356666 999999
Q ss_pred cc--ccccCCCCCCCCeEEEEEEcc-cccccCCC-CccccC-CCCCCCCcCCCCC-CccCCccchhhHHHHHHHHHHHhC
Q 001769 791 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVST-GGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMG 864 (1016)
Q Consensus 791 ~h--K~~~~phg~GGPg~G~i~~~~-~l~~~lpg-~~~g~~-g~~~~re~~~~~g-~i~s~~~G~a~~~~~a~a~l~~lG 864 (1016)
+| |.+.. | .+|+|++++ ++.+.+.. +..|.. ............| |.. -+...++.+.+-|
T Consensus 171 f~~~K~i~~--g----eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~r----m~~~~AAigl~QL---- 236 (363)
T PF01041_consen 171 FHPTKIITT--G----EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFR----MSELQAAIGLAQL---- 236 (363)
T ss_dssp SSTTSSS-S--S----S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-----BHHHHHHHHHHH----
T ss_pred CCCCCCCcC--C----CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccc----cHHHHHHHHHHHH----
Confidence 86 66632 1 237888885 33322210 001100 0000000000011 111 1223333333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCc---cccCCCC-ceeeEEEEEecCch-hHHHHHHHHHH
Q 001769 865 SKGLTEASKIAILNANYMAKRLEKHYPI---LFRGVNG-TVAHEFIVDLRGLK-EELDRYCDALI 924 (1016)
Q Consensus 865 ~eGl~~~~~~~~~nA~yla~~L~~~~~v---~y~g~~~-~~~he~i~~~~~~~-~~ld~f~~~l~ 924 (1016)
+-|.+..++-.++++++.+.|.+...+ ..+.... +..|-|.+.+++.. .+-|++++.|+
T Consensus 237 -~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~ 300 (363)
T PF01041_consen 237 -KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALR 300 (363)
T ss_dssp -HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHH
T ss_pred -HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHH
Confidence 347778888899999999999985322 2221111 45667778776531 13566666665
No 317
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.43 E-value=1.6e-11 Score=142.11 Aligned_cols=265 Identities=15% Similarity=0.134 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
...++++++++.+|.+.+ +.+++|++|...++.++ +.+++++||++...|......+...|.+++.++++++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~aL~~~l~al-------~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~ 103 (376)
T TIGR02379 32 FSRRCETWLENRTGTKKA-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (376)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHc-------CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 345788899999998764 55667766543333322 1246789999998777666667788999999999876
Q ss_pred -CCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-CCCCccCCcEEEeC
Q 001769 713 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 790 (1016)
Q Consensus 713 -g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~~pg~~GaDi~~~s 790 (1016)
+.+|+++++++++ ++|++|+.++| +|... |+++|.++|+++|++++.|+++..+...- ...+.+ .|+.++|
T Consensus 104 ~~~~d~~~le~~i~---~~tk~Iip~~~--~G~~~-d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-~~~~~fS 176 (376)
T TIGR02379 104 TMNIDETLIESAIT---HRTKAIVPVHY--AGVAC-DMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-GHLGTFS 176 (376)
T ss_pred cCCCCHHHHHHhcC---cCceEEEEeCC--CCCcc-CHHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-CCEEEEe
Confidence 5899999999998 78999987776 47776 89999999999999999999886433211 123333 3888898
Q ss_pred ccccccCCCCCCCCeEEEEEEc-ccccccCCCC-ccccCC-CCC--CCCcC--CCCCCccCCccchhhHHHHHHHHHHHh
Q 001769 791 LHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSH-PVVSTG-GIP--APEKS--QPLGTIAAAPWGSALILPISYTYIAMM 863 (1016)
Q Consensus 791 ~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~-~~g~~g-~~~--~re~~--~~~g~i~s~~~G~a~~~~~a~a~l~~l 863 (1016)
+|++= ....|+. +|+++++ +++.+.+... ..|... ... ..... ...| .++--+-..++...+-|
T Consensus 177 f~~~K--~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g---~n~~~~~~~Aa~g~~qL--- 247 (376)
T TIGR02379 177 FHETK--NYTSGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIG---SSYLPSELQAAYLWAQL--- 247 (376)
T ss_pred CCCCC--cCcccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeec---ccCCccHHHHHHHHHHH---
Confidence 87642 2222333 4666665 4554433210 011100 000 00000 0011 00000112222222323
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhccC---CccccCC---CCceeeEEEEEecCchhHHHHHHHHHH
Q 001769 864 GSKGLTEASKIAILNANYMAKRLEKHY---PILFRGV---NGTVAHEFIVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 864 G~eGl~~~~~~~~~nA~yla~~L~~~~---~v~y~g~---~~~~~he~i~~~~~~~~~ld~f~~~l~ 924 (1016)
+-|.+..++..+++++..+.|++.. .+..++. ..+..|-|.+.++.. ..-|+|.+.|+
T Consensus 248 --~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~r~~l~~~L~ 311 (376)
T TIGR02379 248 --EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-DDRNELIKYLK 311 (376)
T ss_pred --HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-CCHHHHHHHHH
Confidence 3466777888889999999987632 1222221 123456677776532 13456666665
No 318
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.43 E-value=1.9e-11 Score=142.45 Aligned_cols=261 Identities=17% Similarity=0.209 Sum_probs=160.4
Q ss_pred ccccccccCCCChhhhhccccccccc--ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChH-HHHHHH
Q 001769 591 MIPLGSCTMKLNATTEMMPVTWPSFA--NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAG 664 (1016)
Q Consensus 591 ~i~LGs~t~~~~~~~~~~~~~~~~f~--~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa-~ae~a~ 664 (1016)
.+.|+.+.+..++............. ..+.|.+ .+|..++...+.+++.+..|.+ .. .+..++|+ +|.
T Consensus 37 ~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al--- 110 (394)
T PRK05942 37 LIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPP---FEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL--- 110 (394)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCC---CCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH---
Confidence 56788776655432211111000111 1234444 5687777777788887776754 33 35555554 443
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-C
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-T 741 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~ 741 (1016)
.++++.+. .++++|+++++.|+.+...+...|++++.++++.+ +.+|+++++++++ +++++|++++|+ .
T Consensus 111 ~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NP 182 (394)
T PRK05942 111 THLALAYV-----NPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNP 182 (394)
T ss_pred HHHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCC
Confidence 33333331 36789999999887777777889999999998754 4699999999997 789999999984 6
Q ss_pred Ccccc--ccHHHHHHHHHHcCcEEEEEccccccc-cC-----cC-CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEc
Q 001769 742 HGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-----LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1016)
Q Consensus 742 ~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~-----l~-~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~ 812 (1016)
+|.+. .++++|+++|+++|+++++|.+...-. .+ +. .++..+..+++.|+.|.|++| |.++|+++++
T Consensus 183 tG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~----GlRiG~i~~~ 258 (394)
T PRK05942 183 TTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMA----GWRVGFVVGN 258 (394)
T ss_pred CCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCCh----hhheeeeecC
Confidence 88887 248899999999999999998742111 00 00 011112346778999998543 5669999988
Q ss_pred ccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 813 KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 813 ~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+++...+.... .....++.+ .....+..+|. ...+.+++..++..++.+++.+.|++
T Consensus 259 ~~l~~~l~~~~------------~~~~~~~~~------~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~ 315 (394)
T PRK05942 259 RHIIQGLRTLK------------TNLDYGIFS------ALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGE 315 (394)
T ss_pred HHHHHHHHHHH------------hhcccCCCH------HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665442100 000001111 11112223333 23455666666777777888888876
No 319
>PRK07908 hypothetical protein; Provisional
Probab=99.43 E-value=3.5e-11 Score=137.89 Aligned_cols=297 Identities=14% Similarity=0.113 Sum_probs=183.8
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
..+..+...|+.+.+.+.+...-+..|.+. +| ..++++.+|+.+|.++.++.++.|++.++..++. ..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~---l~ 95 (349)
T PRK07908 28 AVNVRHDTPPEWLRERLAARLGDLAAYPST-----ED----ERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR---LR 95 (349)
T ss_pred cCCCCCCCCCHHHHHHHHHHhhHhhcCCCc-----cc----hHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh---cC
Confidence 344444557777665655433223445432 22 3456789999999999999999999977665443 22
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh-----hhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-----IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN 325 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~-----L~~l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~ 325 (1016)
+ +.+++. ||++...+.. ++..|++++.++.++ ++.+.++++++++.+| |.+|.+.+.++|.++++.
T Consensus 96 --~-~~viv~---~P~y~~~~~~-~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~- 167 (349)
T PRK07908 96 --P-RRAAVV---HPSFTEPEAA-LRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQLLALRRP- 167 (349)
T ss_pred --C-CeEEEe---CCCChHHHHH-HHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-
Confidence 4 456665 4554444432 345799998887642 1224567888889888 689999999999999975
Q ss_pred CcEEEEEeccccc---cCCCCCC--cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcc
Q 001769 326 GVKVVMATDLLAL---TILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (1016)
Q Consensus 326 GalviV~a~~~al---g~l~~pg--~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~ 399 (1016)
+.+++++ +..+. +-..+.. +.+--++++|. |.|+.| |.-.||+++++++++.+....
T Consensus 168 ~~~iIvD-e~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~------------ 230 (349)
T PRK07908 168 GRILVVD-EAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLA----GLRVGYALGAPDVLARLTRGR------------ 230 (349)
T ss_pred CCEEEEE-CcchhhccCCccccccccCCCEEEEeecccccCCc----cceeeeeecCHHHHHHHHhcC------------
Confidence 7788883 33221 1111111 12223556675 877533 445699999888776652100
Q ss_pred eeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEE
Q 001769 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVK 479 (1016)
Q Consensus 400 ~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~ 479 (1016)
. ..++++.+ ..++ ..++.-.+.+-++++.++..++.+++.+.|+++| +++..++.-.-+.
T Consensus 231 -------------~---~~~~~~~~-~~a~--~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~ 290 (349)
T PRK07908 231 -------------A---HWPVGTLQ-LEAI--AACCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVL 290 (349)
T ss_pred -------------C---CCCccHHH-HHHH--HHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEE
Confidence 0 01222211 1111 1111111122356777888888999999999886 8776422222244
Q ss_pred EecCCHHHHHHHHHHcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 480 VKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 480 i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+..++..++.+.|.++||.+... .++.+|+|+. +++|+++|+++|.
T Consensus 291 ~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~---~~~~~~~l~~al~ 342 (349)
T PRK07908 291 VRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR---PRAEVPVLVQALA 342 (349)
T ss_pred EECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC---CCccHHHHHHHHH
Confidence 45555678888999999987542 2578999994 7889999999885
No 320
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.43 E-value=1.1e-11 Score=143.79 Aligned_cols=170 Identities=18% Similarity=0.193 Sum_probs=120.0
Q ss_pred HHHHHHHHHHhCCCceeeecCC-hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC--
Q 001769 635 NNLGEWLCTITGFDSFSLQPNA-GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~s-Ga~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-- 711 (1016)
.++++.+++.+|++...+..++ +++|. .++++.+. .++++|++++..|..+...+...|.+++.++++.
T Consensus 69 ~~lr~~ia~~l~~~~~~v~~~~g~t~al---~~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 140 (380)
T PRK06225 69 PELRELILKDLGLDDDEALITAGATESL---YLVMRAFL-----SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEE 140 (380)
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCHHHHH---HHHHHHhc-----CCCCEEEEcCCCCcchHHHHHHhCceEEeecccccc
Confidence 4677889999998865544444 44443 33444321 2567899999888777777889999999999743
Q ss_pred -CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccccCcCCCC--ccCCc
Q 001769 712 -KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--YIGAD 785 (1016)
Q Consensus 712 -~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg--~~GaD 785 (1016)
++.+|+++++++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|.+..--........ +....
T Consensus 141 ~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 217 (380)
T PRK06225 141 CNYKLTPELVKENMD---ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHT 217 (380)
T ss_pred CCccCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCE
Confidence 35799999999997 789999999985 678764 3699999999999999999976420000110111 11235
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
+++.+++|+|+.| |..+|++++++++.+.+
T Consensus 218 i~~~s~SK~~g~~----G~RiG~i~~~~~l~~~~ 247 (380)
T PRK06225 218 VTSYSFSKIFGMA----GLRIGAVVATPDLIEVV 247 (380)
T ss_pred EEEeechhhcCCc----cceeEEEecCHHHHHHH
Confidence 6777889998533 46689999987766544
No 321
>PRK07550 hypothetical protein; Provisional
Probab=99.43 E-value=1.8e-11 Score=142.08 Aligned_cols=226 Identities=13% Similarity=0.145 Sum_probs=147.9
Q ss_pred HHHHHHHHHHhccccCCCccccccccccCCCChhhhhcccccc--cccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC
Q 001769 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWP--SFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1016)
Q Consensus 571 ~e~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~--~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~ 648 (1016)
.++.+.+.++++.+. .++.|+++.+.+++.......... .-..+..|.| .+|..++...+.+++.+..|..
T Consensus 15 ~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 15 PEVRAWLAGYDGADG----PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHhhcCC----CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCCHHHHHHHHHHHHHHhCCC
Confidence 466667777765543 467888887766543222111000 0011223444 4687788888888888777754
Q ss_pred --ceeeecCChH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-C-CCCCHHHHHHH
Q 001769 649 --SFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIEELRKA 723 (1016)
Q Consensus 649 --~~~l~~~sGa-~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~-g~iD~~~L~~~ 723 (1016)
...+..++|+ +|. .++++.+. +++++|+++.+.+..+...++..|++++.++.++ + +.+|+++++++
T Consensus 88 ~~~~~i~~t~G~~~al---~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~ 159 (386)
T PRK07550 88 ISPEQVHITSGCNQAF---WAAMVTLA-----GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEAL 159 (386)
T ss_pred CCcceEEEecCcHHHH---HHHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHH
Confidence 3345555554 333 33333321 3578999999888777777889999999999974 3 46799999999
Q ss_pred HHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccccCcCCC---C---ccCC-cEEEeCccc
Q 001769 724 AEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---G---YIGA-DVCHLNLHK 793 (1016)
Q Consensus 724 i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p---g---~~Ga-Di~~~s~hK 793 (1016)
++ +++++|++.+|| .+|.+. .++++|+++|+++|+++++|.+...-......+ . +.+. .+++.|++|
T Consensus 160 ~~---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 160 IT---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred hc---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchh
Confidence 97 688999999985 678765 248999999999999999998642110000011 1 1122 356789999
Q ss_pred cccCCCCCCCCeEEEEEEccccccc
Q 001769 794 TFCIPHGGGGPGMGPIGVKKHLAPF 818 (1016)
Q Consensus 794 ~~~~phg~GGPg~G~i~~~~~l~~~ 818 (1016)
+|++| |.++|++++++++...
T Consensus 237 ~~g~~----G~RiG~i~~~~~~~~~ 257 (386)
T PRK07550 237 SYALT----GHRVGAVVASPARIAE 257 (386)
T ss_pred hccCc----ccceEeeecCHHHHHH
Confidence 99654 4679999988765543
No 322
>PRK07324 transaminase; Validated
Probab=99.43 E-value=9.6e-12 Score=143.95 Aligned_cols=220 Identities=13% Similarity=0.126 Sum_probs=139.1
Q ss_pred HHHHHHHHhccccCCCccccccccccCCCChhhhh---cccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC-CC
Q 001769 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEM---MPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FD 648 (1016)
Q Consensus 573 ~~r~l~~l~~~n~~~~~~~i~LGs~t~~~~~~~~~---~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G-~~ 648 (1016)
-++.+++-++-|.+ ..++++|+.+.+......+. ..........|. + .+|.. ++++.++++++ .+
T Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~Y~---~---~~G~~----~lr~~ia~~~~~~~ 79 (373)
T PRK07324 11 WLNVYEKSATYDIA-ESCIDSLTLEELLALAGKNPEAFYQELGQKKLTYG---W---IEGSP----EFKEAVASLYQNVK 79 (373)
T ss_pred HHHHhhccCccccc-cCCCCCCcHHHHHhccCcchHHHHHHHhcCCccCC---C---CCCCH----HHHHHHHHHhcCCC
Confidence 33333333333433 34577777766554433321 101111222333 3 34654 56666777664 55
Q ss_pred ceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHH
Q 001769 649 SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAE 725 (1016)
Q Consensus 649 ~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~ 725 (1016)
...+..++| ++|.. ++++.+. +++++|+++.+.|..+...++..|.+++.++++.+ ..+|+++++++++
T Consensus 80 ~~~vi~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~ 151 (373)
T PRK07324 80 PENILQTNGATGANF---LVLYALV-----EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR 151 (373)
T ss_pred hhhEEEcCChHHHHH---HHHHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC
Confidence 444444444 44443 3333321 35789999998887777778899999999999754 3589999999887
Q ss_pred cCCCCEEEEEEEcCC-CCcccccc---HHHHHHHHHHcCcEEEEEccccc-cccC-cCCCCcc-CCcEEEeCccccccCC
Q 001769 726 ANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMN-AQVG-LTSPGYI-GADVCHLNLHKTFCIP 798 (1016)
Q Consensus 726 ~~~~~t~~v~i~~Pn-~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~-a~~~-l~~pg~~-GaDi~~~s~hK~~~~p 798 (1016)
++|++|++++|+ .+|.+. + +++|+++|+++|+++++|.+... ...+ .....+. .-.|++.|++|+|++|
T Consensus 152 ---~~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~ 227 (373)
T PRK07324 152 ---PNTKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLP 227 (373)
T ss_pred ---CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCc
Confidence 789999999995 688876 5 89999999999999999976421 1100 0011111 1236778999999654
Q ss_pred CCCCCCeEEEEEEcccccccC
Q 001769 799 HGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 799 hg~GGPg~G~i~~~~~l~~~l 819 (1016)
|.++|++++++++.+.+
T Consensus 228 ----G~RiG~i~~~~~li~~~ 244 (373)
T PRK07324 228 ----GIRVGWIAANEEVIDIL 244 (373)
T ss_pred ----cceeEEEecCHHHHHHH
Confidence 67899999887665543
No 323
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.43 E-value=1.7e-11 Score=140.64 Aligned_cols=180 Identities=16% Similarity=0.218 Sum_probs=126.2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++...+.+++.+..|.+ .. .+..++|++. +..++++.+. ..|+ .+++|+++...+..+...+...|.+
T Consensus 35 ~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~--ai~~~~~~~~-~~g~-~~d~Vl~~~p~y~~~~~~~~~~g~~ 110 (350)
T TIGR03537 35 ALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE--AIFHFPLVFI-DPEE-DRRRVIFGTPGYPVYERGALFAGGE 110 (350)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHHc-CCCC-CCceEEEcCCCCcchHHHHHhcCCE
Confidence 4677777777778887777854 33 5667777642 3333443321 1221 3479999999888888888999999
Q ss_pred EEEEcCCC-C-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccccc---HHHHHHHHHHcCcEEEEEccccccccCcC
Q 001769 704 IVSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1016)
Q Consensus 704 vv~v~~d~-~-g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~~l~ 777 (1016)
++.++.+. + ..+|+++++++++ +++++|++++|+ .+|.+. + +++|+++|+++|+++++|.+...-..+-.
T Consensus 111 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 186 (350)
T TIGR03537 111 PTAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGEP 186 (350)
T ss_pred EEEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCCC
Confidence 99999974 3 3589999999997 689999999994 788776 4 89999999999999999977531111100
Q ss_pred CC--CccCCc--EEEeCccccccCCCCCCCCeEEEEEEccccccc
Q 001769 778 SP--GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 818 (1016)
Q Consensus 778 ~p--g~~GaD--i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~ 818 (1016)
.+ ..++.| +++.|++|+++.| |..+|+++.++++...
T Consensus 187 ~~~~~~~~~~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~ 227 (350)
T TIGR03537 187 PHSALEVGIENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISF 227 (350)
T ss_pred CCchhhcCcCCEEEEeecccccCCc----cccceeeecCHHHHHH
Confidence 01 112233 6777999998544 4668999877665543
No 324
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.43 E-value=9e-11 Score=134.59 Aligned_cols=268 Identities=14% Similarity=0.158 Sum_probs=170.2
Q ss_pred HHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-
Q 001769 217 QTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 288 (1016)
Q Consensus 217 q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~- 288 (1016)
++.+++.+ |. +.. ++.+++|++.++..+++++.-...++|+|++++-.|+.+...++ ..|++++.++.
T Consensus 42 r~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~ 117 (350)
T TIGR03537 42 REAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGAL----FAGGEPTAVKLK 117 (350)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHH----hcCCEEEEcccC
Confidence 34555543 64 455 78889999988777666653110023799999999998888764 35888877654
Q ss_pred ---------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC-CC---Ccccce
Q 001769 289 ---------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-PP---GELGAD 350 (1016)
Q Consensus 289 ---------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~-~p---g~~GaD 350 (1016)
+++++ +.++++++++.+| |.+|.+.+ +++|+++|+++|++++++ +..+..... ++ ..++.|
T Consensus 118 ~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~ 196 (350)
T TIGR03537 118 KEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSD-ECYTEIYFGEPPHSALEVGIE 196 (350)
T ss_pred cccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEe-ccccccccCCCCCchhhcCcC
Confidence 23444 5678899999988 68999887 899999999999999994 333211111 11 122333
Q ss_pred --EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHH
Q 001769 351 --IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1016)
Q Consensus 351 --ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~ 427 (1016)
|+++|. |.||.| |=-.|++...+++...+- +-+...+++++....
T Consensus 197 ~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~q 244 (350)
T TIGR03537 197 NVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLR----------------------------KLRANFGVASPDFVQ 244 (350)
T ss_pred CEEEEeecccccCCc----cccceeeecCHHHHHHHH----------------------------HHHHhhccCCCHHHH
Confidence 677775 877543 112578877766655441 001112233322111
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-CccEEEEecCC---HHHHHHHHHHcCceeecc-
Q 001769 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (1016)
Q Consensus 428 a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~-~~~~v~i~~~~---~~~v~~~L~~~GI~~~~~- 502 (1016)
..+.+ .+...+-++++.+++.++.+++.+.|++.| +++..+. -+ -+-++++. ..++.+.|.++||.+...
T Consensus 245 ~~~~~---~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~g~~-~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~ 319 (350)
T TIGR03537 245 AAAKA---AWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPDATF-YLWVKVPSGIDAKDYALRLLENGIVVAPGE 319 (350)
T ss_pred HHHHH---HhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeEE-EEEEECCCCCCHHHHHHHHHHCCEEEcCch
Confidence 11111 233345567788888888999999999887 7655321 11 12244443 788999999999987531
Q ss_pred -----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 -----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 -----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+|+++. .+.+++++.++.|+
T Consensus 320 ~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~ 348 (350)
T TIGR03537 320 NFGSGEEGYVRVALV--PTLEECEEALRLWE 348 (350)
T ss_pred hhCCCCCCEEEEEec--CCHHHHHHHHHHHh
Confidence 1478999985 57888888888775
No 325
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.43 E-value=2.6e-11 Score=141.26 Aligned_cols=215 Identities=16% Similarity=0.189 Sum_probs=138.7
Q ss_pred cccccccccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCC---ceeeecCCh-HHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFD---SFSLQPNAG-AAGEYAG 664 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~---~~~l~~~sG-a~ae~a~ 664 (1016)
+++.|+.+.+.+.+.............. +.-|.| .+|..++.+.+.+++....|.. ...+..++| ++|..
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~-- 105 (391)
T PRK07309 31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTG---MAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALS-- 105 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH--
Confidence 4678888777665432211110000001 122333 4566666666666766666653 223444444 44443
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~-g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
++++.+. .+++.|+++++.|+.+...++..|.+++.++.+++ +.+|+++++++++++.+++++|++++|+ .+
T Consensus 106 -~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPt 179 (391)
T PRK07309 106 -ASLTAIL-----EPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPT 179 (391)
T ss_pred -HHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCC
Confidence 3333321 35789999998888777778899999999998764 4799999999997443579999999985 67
Q ss_pred cccc--ccHHHHHHHHHHcCcEEEEEcccccccc-C-cCCC-CccCCc--EEEeCccccccCCCCCCCCeEEEEEEcccc
Q 001769 743 GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-G-LTSP-GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL 815 (1016)
Q Consensus 743 G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~-~-l~~p-g~~GaD--i~~~s~hK~~~~phg~GGPg~G~i~~~~~l 815 (1016)
|.+- .++++|+++|+++|+++++|.+...-.. + ...+ ..+..| +++.|++|.|++| |.++|++++++++
T Consensus 180 G~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~ 255 (391)
T PRK07309 180 GVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEF 255 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCc----cceeEEEEeCHHH
Confidence 8764 3699999999999999999987531110 1 0001 111223 7788999999655 5679999998776
Q ss_pred cccC
Q 001769 816 APFL 819 (1016)
Q Consensus 816 ~~~l 819 (1016)
.+.+
T Consensus 256 ~~~~ 259 (391)
T PRK07309 256 TAQL 259 (391)
T ss_pred HHHH
Confidence 5543
No 326
>PRK07049 methionine gamma-lyase; Validated
Probab=99.42 E-value=3.4e-11 Score=141.59 Aligned_cols=211 Identities=18% Similarity=0.138 Sum_probs=145.8
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC----chh
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD----LKD 290 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd----~~~ 290 (1016)
.+++.+|++.|.+. +.++.+|++++.++++++. ++||+|++++..++.+...+...++..|++++.++ .++
T Consensus 87 ~Le~~lA~leg~~~--~iv~~sG~~Ai~~~l~al~---~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~ 161 (427)
T PRK07049 87 IVEDRLAVYEGAES--AALFSSGMSAIATTLLAFV---RPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA 161 (427)
T ss_pred HHHHHHHHHhCCCc--EEEEccHHHHHHHHHHHHh---CCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence 46689999999774 7889999988877776653 37999999999999888776655567899855442 344
Q ss_pred hhc-c-----CCCEeEEEEEcC-CCCeeeccHHHHHHHHHh------CCcEEEEEeccccccCCCCCCcccceEEEecC-
Q 001769 291 IDY-K-----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA------NGVKVVMATDLLALTILKPPGELGADIVVGSA- 356 (1016)
Q Consensus 291 L~~-l-----~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~------~GalviV~a~~~alg~l~~pg~~GaDivvgs~- 356 (1016)
+++ + .+++++|++.+| |.+|.+.|+++|.++++. +|++++|+ +...-.....|.++|+||++.|.
T Consensus 162 l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvD-ety~~~~~~~pl~~g~divv~S~S 240 (427)
T PRK07049 162 IGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACD-NTLLGPVFQKPLEHGADLSVYSLT 240 (427)
T ss_pred HHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEE-CCccccccCCccccCCCEEEEcCc
Confidence 543 3 257999999998 689999999999999998 78888884 45433344456688999999998
Q ss_pred ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHH
Q 001769 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1016)
Q Consensus 357 k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~ 436 (1016)
|.|++ .+|--+|++..++++.+.+-. .+. ..+.|. +++.+ |+.
T Consensus 241 K~~gG---~~glr~G~vv~~~~l~~~l~~-------------------------~~~---~~g~~l-s~~~a-----~l~ 283 (427)
T PRK07049 241 KYVGG---HSDLVAGAVLGRKALIRQVRA-------------------------LRS---AIGTQL-DPHSC-----WML 283 (427)
T ss_pred eeecC---CCCcEEEEEECCHHHHHHHHH-------------------------HHH---hcCCCC-CHHHH-----HHH
Confidence 88863 234456888877766554410 000 001111 11111 123
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
..+-+-+....++..+++..+++.|++..+++
T Consensus 284 ~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 284 GRSLETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33444566666777889999999999874353
No 327
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.42 E-value=2.3e-11 Score=141.98 Aligned_cols=221 Identities=18% Similarity=0.175 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHh-cCCC-CCCEE-EEcCCCccccHHHHHh----------
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVC-IIPVSAHGTNPATAAM---------- 699 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~-~g~~-~~~~V-lv~~saHg~~~~~a~~---------- 699 (1016)
...++++.+++++|.+. .++.+||++|+++++.++|.|+.. +|.. ++++| +.+.+.||+.......
T Consensus 84 ~~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 84 QLAPLYEELAALTGSHK-VLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 45578899999998764 577899999999999999887432 2221 23454 4567889876443321
Q ss_pred --CCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccc---cHHHHHHHHHHcCcEEEEEcccc-cc
Q 001769 700 --CGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANM-NA 772 (1016)
Q Consensus 700 --~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~---di~~I~~ia~~~g~lv~vDga~~-~a 772 (1016)
....+..++. .|++++++++. ++|++|++++|+ ..|.+.+ .+++|+++|+++|+++++|.++. ++
T Consensus 163 ~~~~~~~~~~~~-----~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g 234 (401)
T PRK00854 163 GPFTPGFRVVPF-----GDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLG 234 (401)
T ss_pred CCCCCCeEEeCC-----CCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 1123445554 58999999997 789999999984 6788762 29999999999999999998875 22
Q ss_pred ccCc---CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccch
Q 001769 773 QVGL---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 773 ~~~l---~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~ 849 (1016)
..+. .......+|+++++ |+|+ +|...+|++++++++...+.... .+. ++.++
T Consensus 235 ~~g~~~~~~~~g~~~D~~~~~--K~l~----gg~~~ig~v~~~~~~~~~l~~~~---------------~~~---t~~~~ 290 (401)
T PRK00854 235 RTGKLLAEEHEGIEADVTLIG--KALS----GGFYPVSAVLSNSEVLGVLKPGQ---------------HGS---TFGGN 290 (401)
T ss_pred CCchHhHHhhcCCCCCEEEec--cccc----CCccCeEEEEEcHHHHhcccCCC---------------CCC---CCCcC
Confidence 1110 00112347988874 9884 34345788988887766542100 000 11224
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
...++.+.+.|..+..++ ..++...+++++.+.|++.
T Consensus 291 ~~~~aa~~a~L~~l~~~~---~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 291 PLACAVARAALKVLTEEG---MIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred HHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhh
Confidence 455555666666654443 3566777889999999873
No 328
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.42 E-value=1.3e-11 Score=140.39 Aligned_cols=258 Identities=18% Similarity=0.130 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHH---HhCCcEEEEEcCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a---~~~G~~vv~v~~d 710 (1016)
..+|++.+++.+|.+.+ +..+||+.|...+++++ +.+++|+||+|.. ++.+++ ...|.+.++|++|
T Consensus 36 v~~FE~~~ae~~G~k~a-va~~sgT~AL~laL~al-------~ig~GDeVI~ps~---TfvATan~i~~~Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLGVKYA-VAVSSGTAALHLALLAL-------AIGPGDEVIVPSF---TFVATANAVLLVGAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHhc-------CCCCCCEEEecCC---chHHHHHHHHHcCCeEEEEecC
Confidence 45889999999999986 55677876654444433 2357899999987 666654 4789999999999
Q ss_pred CC-CCCCHHHHHHHHHcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-CCCCccCCcEEE
Q 001769 711 AK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCH 788 (1016)
Q Consensus 711 ~~-g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~~pg~~GaDi~~ 788 (1016)
++ +.+|++.||++|+ ++|++|+..+ ..|..- |+++|.++|++||++|+-|+|+.++...- ...|.+| |+.+
T Consensus 105 ~~T~nid~~~ie~aIt---~~tKAIipVh--l~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G-d~~~ 177 (374)
T COG0399 105 PDTLNIDPDLIEAAIT---PRTKAIIPVH--LAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG-DIGA 177 (374)
T ss_pred CcccCCCHHHHHHHcc---cCCeEEEEeh--hccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-ceEE
Confidence 76 8999999999999 8899999875 678886 99999999999999999999986544322 2356665 6666
Q ss_pred eCc--cccccCCCCCCCCeEEEEEEcc-cccccCCC-CccccCCC-CCCCCcCCCCCCccCCccchhhHHHHHHHHHHHh
Q 001769 789 LNL--HKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS-HPVVSTGG-IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1016)
Q Consensus 789 ~s~--hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg-~~~g~~g~-~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~l 863 (1016)
+|+ +|.+. - | -+|.+++++ ++++.+.- +..|.... ...++ ....| .-..+.---+.|...
T Consensus 178 fSF~~~K~it--t--g--EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~-~~~~G--------~N~rm~~iqAAigl~ 242 (374)
T COG0399 178 FSFHATKNLT--T--G--EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYL-HEELG--------YNYRLTEIQAAIGLA 242 (374)
T ss_pred EEecCCCCcc--c--c--CceEEEeCCHHHHHHHHHHHHhCcCCCccccce-eeecc--------cccCHHHHHHHHHHH
Confidence 666 56553 2 2 246788885 44433210 00111000 00000 00111 001111112333344
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcc--CCccccCCC-CceeeEEEEEecCchhHHHHHHHHHH
Q 001769 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 864 G~eGl~~~~~~~~~nA~yla~~L~~~--~~v~y~g~~-~~~~he~i~~~~~~~~~ld~f~~~l~ 924 (1016)
..+.+.+..++-..++++..+.|++. ..+...... .+..|-+.+.++.....-+++++.|+
T Consensus 243 QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~ 306 (374)
T COG0399 243 QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLK 306 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHH
Confidence 44567888888999999999999974 444443332 26678888877653122344444443
No 329
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.42 E-value=2.8e-11 Score=140.42 Aligned_cols=261 Identities=14% Similarity=0.149 Sum_probs=162.1
Q ss_pred cccccccccCCCChhhhhcc-----cccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGE 661 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~ae 661 (1016)
.++.|+.+.+.+++...... +..+. ++-|.+ .+|..++...+.+++.+.+|.+ .. .+..++|++.
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~- 102 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAENPE---NHRYPS---YEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE- 102 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCCC---CCCCCC---CCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH-
Confidence 45778888776654321111 11111 233433 5677777777888887777764 22 3555555432
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC
Q 001769 662 YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP 739 (1016)
Q Consensus 662 ~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~P 739 (1016)
+..++++.+. .+++.|+++++.++.+...++..|.+++.++++.+ ..+|++++++++. +++++|++++|
T Consensus 103 -~l~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P 173 (383)
T TIGR03540 103 -GIAHIPLAFV-----NPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYP 173 (383)
T ss_pred -HHHHHHHHhC-----CCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCC
Confidence 2233333331 35789999999887777778899999999999754 4579999999987 78999999998
Q ss_pred C-CCccccc--cHHHHHHHHHHcCcEEEEEcccccc-ccCcCCC--C----ccCCcEEEeCccccccCCCCCCCCeEEEE
Q 001769 740 S-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGLTSP--G----YIGADVCHLNLHKTFCIPHGGGGPGMGPI 809 (1016)
Q Consensus 740 n-~~G~i~~--di~~I~~ia~~~g~lv~vDga~~~a-~~~l~~p--g----~~GaDi~~~s~hK~~~~phg~GGPg~G~i 809 (1016)
+ .+|.+.+ .+++|+++|+++|+++++|.++..- ..+...+ . ...-.|++.|+.|+|+.| |..+|++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~----GlRiG~~ 249 (383)
T TIGR03540 174 NNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMT----GWRIGMA 249 (383)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCc----cceeeEE
Confidence 5 6888872 3799999999999999999876311 0110001 1 112346778999998544 5669999
Q ss_pred EEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 810 GVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 810 ~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+.++++...+... .......++ ......+..+|.. +.+-+++..+...++..++.+.|++.
T Consensus 250 i~~~~l~~~~~~~------------~~~~~~~~~------~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 310 (383)
T TIGR03540 250 VGNADLIAGLGKV------------KTNVDSGVF------QAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI 310 (383)
T ss_pred eCCHHHHHHHHHH------------HHhcccCCC------hHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9887665543110 000001111 1122222333332 34445666667778888899999873
No 330
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.42 E-value=5.4e-12 Score=146.45 Aligned_cols=228 Identities=15% Similarity=0.178 Sum_probs=151.1
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEE
Q 001769 626 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 626 ~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv 705 (1016)
..+|..++..++++++++++|.+. .+..++|+++..+++.++ . +++++|++++..|.++...+...|.+++
T Consensus 81 ~~~G~~~l~~~l~~~la~~~g~~~-~i~~tsG~~a~~~~~~~l---~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~~ 151 (397)
T PRK06939 81 FICGTQDLHKELEEKLAKFLGTED-AILYSSCFDANGGLFETL---L-----GKEDAIISDALNHASIIDGVRLCKAKRY 151 (397)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc-EEEEcChHHHHHHHHHHh---C-----CCCCEEEEEhhhhHHHHHHHHhcCCceE
Confidence 357888889999999999999774 466777876664443332 1 3678999999988887777888899888
Q ss_pred EEcCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcC---C
Q 001769 706 SVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT---S 778 (1016)
Q Consensus 706 ~v~~d~~g~iD~~~L~~~i~~~---~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~---~ 778 (1016)
.++. .|+++++++++++ +.++++|+.... |.+|.+. ++++|.++|+++|+++++|.++..+..+.. .
T Consensus 152 ~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~-~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~ 225 (397)
T PRK06939 152 RYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA-PLPEICDLADKYDALVMVDDSHAVGFVGENGRGT 225 (397)
T ss_pred EeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCH
Confidence 8765 5899999988631 226777777643 4578887 899999999999999999988743221110 0
Q ss_pred ---CC-ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHH
Q 001769 779 ---PG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1016)
Q Consensus 779 ---pg-~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~ 854 (1016)
.+ ..+.|+++.|+||+|+ |+.+|++++++++.+.+..... ....++.. ....+.
T Consensus 226 ~~~~~~~~~~~i~~~S~sK~~~------g~r~G~v~~~~~~~~~l~~~~~-----------~~~~~~~~-----~~~~~~ 283 (397)
T PRK06939 226 VEHFGVMDRVDIITGTLGKALG------GASGGYTAGRKEVIDWLRQRSR-----------PYLFSNSL-----APAIVA 283 (397)
T ss_pred HHHcCCCCCCcEEEEECHHHhC------ccCceEEEeCHHHHHHHHHhCc-----------cccccCCC-----CHHHHH
Confidence 01 1257899999999983 2356899988776654421000 00001111 111122
Q ss_pred HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
.+.+.+..+. + ..++.++...+.+++.+.|++ ++++
T Consensus 284 a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~~~~~ 320 (397)
T PRK06939 284 ASIKVLELLE-E-SDELRDRLWENARYFREGMTAAGFTL 320 (397)
T ss_pred HHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 2333344432 2 245567778889999999987 4444
No 331
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.42 E-value=1.2e-10 Score=133.55 Aligned_cols=297 Identities=15% Similarity=0.116 Sum_probs=185.5
Q ss_pred cCCCCCCCCChHHHHHHHHhCC--CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHh
Q 001769 171 IGMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~--~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~ 248 (1016)
++.|--+...|+.+.+++.+.- .....|.+ + + ..++++.+|++++.++.++.+++|+++++..++.++
T Consensus 27 l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~---~---~----~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 27 MDANETPFELPEEVIKNIQEIVKSSQVNIYPD---P---T----AEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC---c---c----HHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh
Confidence 3444445556666665554311 12333432 1 1 245778999999998889989999988776665554
Q ss_pred ccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cC-CCEeEEEEEcC-CCCeeeccHHH
Q 001769 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS-GDVCGVLVQYP-GTEGEVLDYGD 317 (1016)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~-~~t~~V~v~~p-n~~G~i~dl~e 317 (1016)
. ++||+|++++-.++.+...+ +..|.+++.++. +++++ ++ .++++|++.+| |.+|.+.+.++
T Consensus 97 -~--~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~ 169 (351)
T PRK14807 97 -I--NKGDVVIYPHPSFAMYSVYS----KIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERED 169 (351)
T ss_pred -c--CCCCEEEEeCCChHHHHHHH----HHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHH
Confidence 2 37999999988777655543 346777777654 33444 54 37899999888 68999999999
Q ss_pred HHHHHHhCCcEEEEEeccc-cc-cC-CCC-CCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 318 FIKNAHANGVKVVMATDLL-AL-TI-LKP-PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 318 I~~lah~~GalviV~a~~~-al-g~-l~~-pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
+.+++++++.+++++ +.. .+ +- ..+ .....--|+++|. |.|+.| |=-.||+...+++++.+-.
T Consensus 170 l~~l~~~~~~~~ivD-e~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----GlRiG~~v~~~~~~~~~~~------- 237 (351)
T PRK14807 170 IIKIIEKSRGIVVVD-EAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLA----GLRVGYAVANENILKYLNL------- 237 (351)
T ss_pred HHHHHHhCCCEEEEe-CcchhhcccchHHHhhhCCCEEEEecchHhcccc----hhceeeeecCHHHHHHHHH-------
Confidence 999999988887774 332 11 10 000 0112234777776 888644 2246888877776655410
Q ss_pred cCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC
Q 001769 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL 472 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~ 472 (1016)
.+...+++ .+.-.++..++. ...+++..++..++.+++.+.|+++.|+++..+
T Consensus 238 ---------------------~~~~~~~~---~~~q~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~ 290 (351)
T PRK14807 238 ---------------------VKSPYNIN---SLSQVIALKVLR---TGVLKERVNYILNERERLIKELSKIPGIKVYPS 290 (351)
T ss_pred ---------------------ccCCCCcC---HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC
Confidence 00011111 111111111111 223556666677778888899987733776532
Q ss_pred -CCccEEEEecCCHHHHHHHHHHcCceeeccc-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 473 -PFFDTVKVKCADAHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 473 -~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~-----~~~lris~te~~t~edid~ll~aL~ 528 (1016)
..| +.+.++...++.+.|.++||.++... ++.+|+++. +.++.++|+++|.
T Consensus 291 ~~~~--~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~ 347 (351)
T PRK14807 291 KTNF--ILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLK 347 (351)
T ss_pred CccE--EEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHH
Confidence 222 33555557789999999999886532 467999987 6788889988885
No 332
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.41 E-value=3.9e-11 Score=126.52 Aligned_cols=225 Identities=20% Similarity=0.289 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHhCCCceeeecCChH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC--
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-- 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa-~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d-- 710 (1016)
+..+.+.|++.+|||.+-+ +.|| .|-++++.++. +++|-|++...+|.+.--+|+..|++|..||-.
T Consensus 63 I~~F~~dlaeFlg~D~~R~--t~GARe~KfavMhal~--------~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~ 132 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRV--TAGAREAKFAVMHALC--------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGY 132 (382)
T ss_pred HHHHHHHHHHHhCCceeee--cccchhhHHHHHHHhc--------cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCC
Confidence 4567777999999998544 4454 46666655553 367899999999988777789999999999954
Q ss_pred CCCCCCHHHHHHHHHcC----CCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCccCCc
Q 001769 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~----~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~GaD 785 (1016)
++..++++...+.|++. ++.+++.++++|. .+|.+. |.+.|+++|+++|+++++.+|.+.+-.. .+-.+.|+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~-Dakkva~ic~e~gvPlllN~AYt~Grmp-vs~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA-DAKKVAKICREYGVPLLLNCAYTVGRMP-VSGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch-hhHHHHHHHHHcCCceEeecceeecccc-ccccccCCC
Confidence 35789999888887542 2457888999995 789997 9999999999999999999887655443 245688999
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCC-CCCCCcCCCCCCccCCccchhhHHHHH-HHHHHHh
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG-IPAPEKSQPLGTIAAAPWGSALILPIS-YTYIAMM 863 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~-~~~re~~~~~g~i~s~~~G~a~~~~~a-~a~l~~l 863 (1016)
+++.|+||+++. .+| +|+++.++++.+..-.+. |. +...|. .-.| |+ ..|...+.++| .-+..
T Consensus 211 FiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~r~S----g~~~~~KEv-ellG--CT-~rGapivTlmASfP~V~-- 275 (382)
T COG1103 211 FIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVLRRS----GRAFPKKEV-ELLG--CT-VRGAPIVTLMASFPHVV-- 275 (382)
T ss_pred EEEecCccchhc----cCC-eeEEeehhHHHHHHHhhc----cccccccee-eeec--cc-ccCchHHHHHhcCHHHH--
Confidence 999999999863 345 789999988765432111 11 000010 1122 22 23333322222 22222
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 864 GSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 864 G~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+-. +.++..+++|+|+.+.|++
T Consensus 276 --eRV-krWdeEv~kaR~fv~elEk 297 (382)
T COG1103 276 --ERV-KRWDEEVEKARWFVAELEK 297 (382)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHH
Confidence 212 3477889999999999997
No 333
>PRK09082 methionine aminotransferase; Validated
Probab=99.41 E-value=8.7e-11 Score=136.53 Aligned_cols=322 Identities=14% Similarity=0.123 Sum_probs=196.5
Q ss_pred HHHHHHHHhcCCCccccccCCCCCCCCChHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCC---
Q 001769 153 MIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--- 228 (1016)
Q Consensus 153 ~~~~l~~la~~n~~~~~~lG~g~y~~~~p~~i~~~i~~~~-~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~--- 228 (1016)
+.+.+.++.+++...+ +|.|.-+...|..+.+.+.+.- .....|.| .+|..+....+++.+.++.|.+.
T Consensus 19 ~~~~~~~~~~~~~~i~--l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~G~~~lr~~~a~~l~~~~~~~~~~~ 91 (386)
T PRK09082 19 IFTVMSALAAEHGAIN--LSQGFPDFDGPPYLVEALAYAMAAGHNQYPP-----MTGVAALREAIAAKTARLYGRQYDAD 91 (386)
T ss_pred HHHHHHHHHhhCCEEE--ecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC-----CCCcHHHHHHHHHHHHHHhCCCCCCC
Confidence 5566666655543332 3444322223344432332210 11344544 35666666677778888888753
Q ss_pred ccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---------hhhhc-cCCCE
Q 001769 229 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDV 298 (1016)
Q Consensus 229 anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---------~~L~~-l~~~t 298 (1016)
.++.++.|++.++..++.++. ++||+|++++..|+.+...++. .|.+++.++. +++++ +.+++
T Consensus 92 ~~i~~t~G~~~al~~~~~~~~---~~gd~Vli~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 164 (386)
T PRK09082 92 SEITVTAGATEALFAAILALV---RPGDEVIVFDPSYDSYAPAIEL----AGGRAVRVALQPPDFRVDWQRFAAAISPRT 164 (386)
T ss_pred CcEEEeCCHHHHHHHHHHHHc---CCCCEEEEeCCCchhhHHHHHH----cCCEEEEEecCcccccCCHHHHHHhcCccc
Confidence 268888999988887776653 3799999999999998877653 4777777654 33555 66788
Q ss_pred eEEEEEcC-CCCeee---ccHHHHHHHHHhCCcEEEEEeccccccCC-----CC----CCcccceEEEecC-ccccccCC
Q 001769 299 CGVLVQYP-GTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTIL-----KP----PGELGADIVVGSA-QRFGVPMG 364 (1016)
Q Consensus 299 ~~V~v~~p-n~~G~i---~dl~eI~~lah~~GalviV~a~~~alg~l-----~~----pg~~GaDivvgs~-k~lg~P~g 364 (1016)
++|++.+| |.+|.+ +++++|+++|+++|++++++ +..+.... .+ ++..+-.|+++|. |.||.|
T Consensus 165 ~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~D-e~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~-- 241 (386)
T PRK09082 165 RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSD-EVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVT-- 241 (386)
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEe-hhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccch--
Confidence 99999888 789977 68999999999999999984 33221111 01 1112345788886 877543
Q ss_pred CCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHH
Q 001769 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1016)
Q Consensus 365 ~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~ 444 (1016)
|=-.|++.+.+++++.+- +.+-....+.+... ..+++-++.. .++-++
T Consensus 242 --G~RiG~iv~~~~l~~~~~----------------------------~~~~~~~~~~~~~~-q~~~~~~l~~-~~~~~~ 289 (386)
T PRK09082 242 --GWKVGYCVAPAALSAEFR----------------------------KVHQYNTFTVNTPA-QLALADYLRA-EPEHYL 289 (386)
T ss_pred --hhhhhhhhCCHHHHHHHH----------------------------HHHhhhcCCCChHH-HHHHHHHHhC-ChHHHH
Confidence 223588888777665441 00000111211211 1122222221 345567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC---C--HHHHHHHH-HHcCceeecc--------cCCeEE
Q 001769 445 TIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA---D--AHAIASAA-YKIEMNLRVV--------DSNTVT 508 (1016)
Q Consensus 445 ~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~---~--~~~v~~~L-~~~GI~~~~~--------~~~~lr 508 (1016)
++.+...++.+++.+.|++.| +++... .++ +.++++ + ..++++.| .++||.+.+. ..+.+|
T Consensus 290 ~~~~~~~~~~~~~~~~L~~~~-~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~R 366 (386)
T PRK09082 290 ELPAFYQAKRDRFRAALANSR-FKLLPCEGTYF--QLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVR 366 (386)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CcccCCCeeEE--EEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEE
Confidence 777778888999999999876 765432 222 222322 2 77888886 4679976431 136799
Q ss_pred EEeccCCCHHHHHHHHHHHh
Q 001769 509 ASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 509 is~te~~t~edid~ll~aL~ 528 (1016)
+|+.. +++++++.++.|+
T Consensus 367 i~~~~--~~~~l~~~~~rl~ 384 (386)
T PRK09082 367 LCFAK--QEETLDAAAERLC 384 (386)
T ss_pred EEecC--CHHHHHHHHHHHh
Confidence 99984 6888888888775
No 334
>PRK15029 arginine decarboxylase; Provisional
Probab=99.41 E-value=4.2e-12 Score=155.94 Aligned_cols=153 Identities=15% Similarity=0.120 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
.+.|.|+..++++|.+.+.+.+|++++|+.++++++. +++++||++..+|-+.-..+.+.|.+.++++...+
T Consensus 206 ~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~ 277 (755)
T PRK15029 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRN 277 (755)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 4779999999999999988999998889887777653 36789999999999888888999999999975432
Q ss_pred -----CCCC-----HHHHHHHHHcCCCCEE--------EEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEcccccccc
Q 001769 713 -----GNIN-----IEELRKAAEANRDNLS--------TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (1016)
Q Consensus 713 -----g~iD-----~~~L~~~i~~~~~~t~--------~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~ 774 (1016)
|.++ ++.++++|.++ +.++ ++++++|++.|++. |+++|+++||++|++++||.|+. ++.
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhG-ah~ 354 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWY-GYA 354 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCCcceee-CHHHHHHHHHhcCCeEEEECccc-ccc
Confidence 4455 99999999765 3344 99999999999998 99999999999999999998763 222
Q ss_pred Cc---C---CCC-----c-cCCc-EEEeCcccccc
Q 001769 775 GL---T---SPG-----Y-IGAD-VCHLNLHKTFC 796 (1016)
Q Consensus 775 ~l---~---~pg-----~-~GaD-i~~~s~hK~~~ 796 (1016)
.+ . .+. . .|+| +++.|.||+++
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~ 389 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN 389 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhccc
Confidence 11 1 111 3 7899 99999999984
No 335
>PRK07337 aminotransferase; Validated
Probab=99.41 E-value=2.4e-11 Score=141.17 Aligned_cols=210 Identities=18% Similarity=0.228 Sum_probs=137.2
Q ss_pred cccccccccCCCChhhhhccccccccc--ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeecCChH-HHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSFA--NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGA-AGEYAG 664 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f~--~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa-~ae~a~ 664 (1016)
+++.|+.+.+.+++......... +.. ..+.|.+ .+|..++...+.+++.+..|.+ ...+..++|+ +|.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al--- 103 (388)
T PRK07337 31 DIIHMGIGEPDFTAPEPVVEAAA-RALRRGVTQYTS---ALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAAL--- 103 (388)
T ss_pred CEEEeCCcCCCCCCCHHHHHHHH-HHHhcCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHH---
Confidence 45778887766543221111000 011 1122333 4677777777777777666754 3344444444 333
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-C
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-T 741 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~ 741 (1016)
.++++.+. +++++|+++++.|..+...+...|.+++.++.+. ++.+|+++++++++ +++++|++.+|+ .
T Consensus 104 ~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NP 175 (388)
T PRK07337 104 LLACLALV-----ERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNP 175 (388)
T ss_pred HHHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCC
Confidence 23333321 3578999999988888777888999999999975 35899999999997 789999999985 6
Q ss_pred Ccccc--ccHHHHHHHHHHcCcEEEEEccccc-cccC-cCCCCccCCcE-EEeCccccccCCCCCCCCeEEEEEEccccc
Q 001769 742 HGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LTSPGYIGADV-CHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (1016)
Q Consensus 742 ~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~-l~~pg~~GaDi-~~~s~hK~~~~phg~GGPg~G~i~~~~~l~ 816 (1016)
+|.+. .++++|+++|+++|+++++|.+... .... ......++.++ ++.|++|.|++| |..+|++++.+++.
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~~~~~~l~ 251 (388)
T PRK07337 176 TGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMT----GWRLGWLVVPEALV 251 (388)
T ss_pred CCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCc----hhheeeeecCHHHH
Confidence 88866 2589999999999999999976421 1100 11122344455 466999999644 56799999887655
Q ss_pred cc
Q 001769 817 PF 818 (1016)
Q Consensus 817 ~~ 818 (1016)
..
T Consensus 252 ~~ 253 (388)
T PRK07337 252 GT 253 (388)
T ss_pred HH
Confidence 43
No 336
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.40 E-value=2.7e-11 Score=139.93 Aligned_cols=225 Identities=13% Similarity=0.117 Sum_probs=145.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEE
Q 001769 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v 707 (1016)
+|......++++.+++++|.+. .+.+++|+++.++ +++.+. +++++|++++..|+.+...+.+.|.+++.+
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~~-~i~~~~g~~~~~~---~l~~~~-----~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~ 150 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAER-ALLFSSGYAANLA---VLTALA-----GKGDLIVSDKLNHASLIDGARLSRARVRRY 150 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEeCccCHHHHHHHHhcCCceEEe
Confidence 4445567789999999999654 4666777765433 333321 357899999999988887788899999988
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcC--------C
Q 001769 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--------S 778 (1016)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~--------~ 778 (1016)
+. .|+++++++++..+++++++++++++ .+|... ++++|+++|+++|+++++|.++..+..+.. .
T Consensus 151 ~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~-~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~ 224 (385)
T PRK05958 151 PH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLA-PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAG 224 (385)
T ss_pred CC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC-CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhC
Confidence 76 48999999997322246666666664 578887 899999999999999999998853321100 0
Q ss_pred CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 779 pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
.....-++++.++||+|+. +| |+++.++++.+.+-... +....+. . ++...++.+++
T Consensus 225 ~~~~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~-----------~~~~~~~-~----~~~~~~aa~~a 281 (385)
T PRK05958 225 LAGEPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINRA-----------RPFIFTT-A----LPPAQAAAARA 281 (385)
T ss_pred CCCCCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHhC-----------ccceecC-C----CCHHHHHHHHH
Confidence 1112234778899999952 23 67777766554321000 0000000 0 11222333444
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
.+..+... .++.++...+.+++.+.|++ ++++
T Consensus 282 al~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~ 314 (385)
T PRK05958 282 ALRILRRE--PERRERLAALIARLRAGLRALGFQL 314 (385)
T ss_pred HHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 55544222 45677888899999999987 4554
No 337
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.40 E-value=2.6e-11 Score=139.87 Aligned_cols=281 Identities=17% Similarity=0.169 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~-- 289 (1016)
.+.+|++.+++++|.+. +..+++||+|..+++.++.+. +|++|++|...++++..++.. .|.+++.+|++
T Consensus 26 ~~~~fE~~~a~~~g~~~--~~~~~sgt~Al~~al~~l~~~--~gdeVi~p~~t~~~~~~ai~~----~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKY--AVAVSSGTSALHLALRALGLG--PGDEVIVPAYTFPATASAILW----AGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSE--EEEESSHHHHHHHHHHHTTGG--TTSEEEEESSS-THHHHHHHH----TT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCe--EEEeCChhHHHHHHHHhcCCC--cCceEecCCCcchHHHHHHHH----hccEEEEEeccCC
Confidence 35568899999999765 899999999999999988764 899999999999999998754 59999998764
Q ss_pred -------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC---CCCCcccceEEEecC--
Q 001769 290 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGELGADIVVGSA-- 356 (1016)
Q Consensus 290 -------~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l---~~pg~~GaDivvgs~-- 356 (1016)
++++ ++++|++|++++ ++|...|+++|.++|+++|++++-++ .+++|.. +..|.+| |+.++|.
T Consensus 98 ~~~id~~~~~~~i~~~t~ai~~~h--~~G~~~d~~~i~~~~~~~~i~lIeD~-a~a~g~~~~g~~~G~~g-d~~~fSf~~ 173 (363)
T PF01041_consen 98 TLNIDPEALEKAITPKTKAILVVH--LFGNPADMDAIRAIARKHGIPLIEDA-AQAFGARYKGRPVGSFG-DIAIFSFHP 173 (363)
T ss_dssp TSSB-HHHHHHHHHTTEEEEEEE---GGGB---HHHHHHHHHHTT-EEEEE--TTTTT-EETTEETTSSS-SEEEEESST
T ss_pred cCCcCHHHHHHHhccCccEEEEec--CCCCcccHHHHHHHHHHcCCcEEEcc-ccccCceeCCEeccCCC-CceEecCCC
Confidence 3556 788999999887 89999999999999999999999843 4455532 2346677 9999996
Q ss_pred -ccccccCCCCCcceEEEEeeh-hhhhcCCC-ceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 357 -QRFGVPMGYGGPHAAFLATSQ-EYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 357 -k~lg~P~g~GGP~~Gfl~~~~-~l~~~lpg-rivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
|.+ +.| .+|++.+++ ++.+++.- +-.|...+ .. ++......+..+.-+.-+.|++
T Consensus 174 ~K~i--~~g----eGG~v~~~~~~~~~~~~~~~~~g~~~~--~~--------------~~~~~~~~~g~n~rm~~~~AAi 231 (363)
T PF01041_consen 174 TKII--TTG----EGGAVVTNDPELAERARALRNHGRSRD--AF--------------RRYRHELPPGYNFRMSELQAAI 231 (363)
T ss_dssp TSSS---SS----S-EEEEESTHHHHHHHHHHTBTTEETS--EC--------------STTEESSSS--B-B-BHHHHHH
T ss_pred CCCC--cCC----CCeeEEecHHHHHHHhhhhhccCcCcc--cc--------------ccccccccCCcccccHHHHHHH
Confidence 444 222 237888875 33333310 00111100 00 0000000000111111223333
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---C---CccEEEEecC-----CHHHHHHHHHHcCceeecc
Q 001769 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---P---FFDTVKVKCA-----DAHAIASAAYKIEMNLRVV 502 (1016)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~---~---~~~~v~i~~~-----~~~~v~~~L~~~GI~~~~~ 502 (1016)
-+..+ +-++++.++-.++++++.+.|.++.++..... . ....+.+.++ .-.++.+.|.++||..+..
T Consensus 232 gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 232 GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPH 309 (363)
T ss_dssp HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCS
T ss_pred HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCccccc
Confidence 22222 34666667777899999999999865655421 1 1123444444 2578999999999964321
Q ss_pred c----------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 D----------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 ~----------------------------~~~lris~te~~t~edid~ll~aL~ 528 (1016)
. ...+.+-+++.-+.+|+++++++|+
T Consensus 310 ~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 310 YPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 1346777788889999999988873
No 338
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.40 E-value=1.5e-10 Score=135.06 Aligned_cols=274 Identities=15% Similarity=0.164 Sum_probs=167.8
Q ss_pred HHHHHHHHHHcCCC-CccEEEccchHHHHHHHHHHhccccCCCCEEEEc-CCCCHHHHHHHHHh--------hcCCCeEE
Q 001769 214 LNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA-SNCHPQTIDICITR--------ADGFDIKV 283 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~-~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs-~~~Hps~~~~l~~~--------a~~~gi~v 283 (1016)
.++.+.+++++|.+ ...+.++++|+.++++++...+.. .+++|+.. ..-|..+...+... ....+..+
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~--g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT--GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGV 165 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH--CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCc
Confidence 36778999998854 356888899999999876644433 23455544 56666655443210 01112233
Q ss_pred EEe---Cchhhhc-cCCCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEecccc-ccCCCCC-----Cccc
Q 001769 284 VVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKPP-----GELG 348 (1016)
Q Consensus 284 ~~v---d~~~L~~-l~~~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~a-lg~l~~p-----g~~G 348 (1016)
..+ |++++++ +.+++++|++..+ |..|.+.| +++|.++|+++|++++++ +..+ +|-.... ....
T Consensus 166 ~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D-Ev~~g~gr~g~~~~~~~~~~~ 244 (398)
T PRK03244 166 EHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLD-EVQTGIGRTGAWFAHQHDGVT 244 (398)
T ss_pred eEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-ccccCCcccchHHhhhhhCCC
Confidence 333 4566776 6678888888765 78899887 899999999999999994 4332 2211110 1123
Q ss_pred ceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHH
Q 001769 349 ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1016)
Q Consensus 349 aDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a 428 (1016)
.|+++. +|.|+. |-| .|++.+++++.+.+... .. ..| ++..++..
T Consensus 245 pDi~t~-sK~l~~----G~~-ig~~~~~~~~~~~~~~~----------~~----------------~~t---~~~~~~~~ 289 (398)
T PRK03244 245 PDVVTL-AKGLGG----GLP-IGACLAFGPAADLLTPG----------LH----------------GST---FGGNPVAC 289 (398)
T ss_pred CCEEEE-chhhhC----Ccc-cEEEEEcHHHHhhccCC----------CC----------------cCC---CCCCHHHH
Confidence 577644 488862 223 46677777776655210 00 001 11122222
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc----CCCCccEEEEecCCHHHHHHHHHHcCceeecccC
Q 001769 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ----GLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDS 504 (1016)
Q Consensus 429 ~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~----~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~~ 504 (1016)
.++...+..+..+ ++.+++.++.++|++.|++++ +.++ +...+-.+.+..+.+.++.+.|.++||.++....
T Consensus 290 aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~-~~~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~~ 365 (398)
T PRK03244 290 AAALAVLDTIASE---GLLENAERLGEQLRAGIEALG-HPLVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVAP 365 (398)
T ss_pred HHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcC-CCceeeEeeccEEEEEEEeccHHHHHHHHHHHCCeEEeecCC
Confidence 2222223434333 356778888999999999865 3221 1111212233211277899999999999977556
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 505 NTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 505 ~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+.||++++..+|++||++++++|..
T Consensus 366 ~~iR~~p~~~~t~~~i~~~~~~l~~ 390 (398)
T PRK03244 366 DVIRLAPPLIITDAQVDAFVAALPA 390 (398)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHH
Confidence 8899999999999999999999964
No 339
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.40 E-value=7.5e-11 Score=135.49 Aligned_cols=262 Identities=14% Similarity=0.110 Sum_probs=161.9
Q ss_pred HHHHHHHHHHcCCCCccEEE-ccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001769 214 LNFQTMIADLTGLPMSNASL-LDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl-~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---- 288 (1016)
.++++.+|+++|.++.++.+ ..|+++++..++.++ . +++++|++++-.++.+...+ +..|++++.++.
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~-~--~~gd~vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTF-I--DPGDEVIIPTPTFSYYEISA----KAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHh-c--CCCCEEEEcCCChHHHHHHH----HHcCCEEEEeecCCCC
Confidence 56788999999998888888 456665555554444 2 27899999998887766554 345888877653
Q ss_pred ----hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC----CcccceEEEecC-c
Q 001769 289 ----KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----GELGADIVVGSA-Q 357 (1016)
Q Consensus 289 ----~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~~p----g~~GaDivvgs~-k 357 (1016)
+++++ +++++++|++.+| |.+|.+.|.+++.++++++|+++++| +......-.+. .+.+--++++|. |
T Consensus 145 ~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~D-e~y~~~~~~~~~~~~~~~~~vi~~~S~SK 223 (361)
T PRK00950 145 SLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVD-EAYVEFAEYDYTPLALEYDNLIIGRTFSK 223 (361)
T ss_pred CcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEE-CchhhhCccchHHHHHhcCCEEEEEeehH
Confidence 33554 5667888888888 68999999999999999999999994 32211000000 111222566775 8
Q ss_pred cccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~ 437 (1016)
.||.| |=-.|++.+++++++.+- +-+...+++ .+ +..++. ..+
T Consensus 224 ~~g~~----GlRiG~~~~~~~~~~~~~----------------------------~~~~~~~~~---~~-~~~~a~-~~l 266 (361)
T PRK00950 224 VFGLA----GLRIGYGFVPEWLIDYYM----------------------------RAKTPFSLT---RL-SQAAAI-AAL 266 (361)
T ss_pred hhcCc----hhhcchhcCCHHHHHHHH----------------------------HhcCCCCCC---HH-HHHHHH-HHh
Confidence 77543 112578887776655431 000011111 11 111221 111
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeecc------cCCeEEE
Q 001769 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------DSNTVTA 509 (1016)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~------~~~~lri 509 (1016)
...+-+++..++..++.+++.+.|. +++..+. -.-+.+.++. +.++.+.|.++||.++.. .++.+|+
T Consensus 267 ~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRi 341 (361)
T PRK00950 267 SDKEYIEKSIEHGIKSREYLYNELP----FKVYPSE-ANFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRV 341 (361)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhcC----eeECCCc-ceEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEE
Confidence 1222245555666666666666554 4443211 1123344443 789999999999988642 2467999
Q ss_pred EeccCCCHHHHHHHHHHHh
Q 001769 510 SFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 510 s~te~~t~edid~ll~aL~ 528 (1016)
|++ +.+|+++++++|.
T Consensus 342 s~~---~~~~~~~l~~~L~ 357 (361)
T PRK00950 342 SIG---TFEENERFLEILK 357 (361)
T ss_pred ECC---CHHHHHHHHHHHH
Confidence 987 7889999999985
No 340
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=3e-11 Score=138.61 Aligned_cols=216 Identities=18% Similarity=0.194 Sum_probs=144.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++.+++.++.+...+..++|++. +..++++.+. .++++|+++++.+..+...++..|.+++.++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~--~l~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDE--IIHLIMLAFI-----NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46778888888987656666667642 2233344331 3578999998877666666788999999999987788
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCC-C--CccCCcEEEeC
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-P--GYIGADVCHLN 790 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~-p--g~~GaDi~~~s 790 (1016)
+|+++++++++. .++++|++++|+ .+|.+. +.+++.+++++++.++++|.+... +.+-.. + ....--|++.|
T Consensus 135 ~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVI-EREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEeCcchh-hcccchHHHhhhCCCEEEEec
Confidence 999999999972 378999999995 789987 899999999998899999987631 111100 1 11222477789
Q ss_pred ccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHH
Q 001769 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1016)
Q Consensus 791 ~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~ 870 (1016)
++|+|++| |.++|+++.++++...+-.. +...+++ ......+..+|.. ..+.+
T Consensus 211 ~SK~~~~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~------~~~q~~~~~~l~~---~~~~~ 263 (351)
T PRK14807 211 LSKAFGLA----GLRVGYAVANENILKYLNLV--------------KSPYNIN------SLSQVIALKVLRT---GVLKE 263 (351)
T ss_pred chHhcccc----hhceeeeecCHHHHHHHHHc--------------cCCCCcC------HHHHHHHHHHHhH---HHHHH
Confidence 99999655 57799999887665543110 0011111 1112223344432 23556
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 001769 871 ASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 871 ~~~~~~~nA~yla~~L~~ 888 (1016)
..+....+.+++.+.|++
T Consensus 264 ~~~~~~~~r~~l~~~l~~ 281 (351)
T PRK14807 264 RVNYILNERERLIKELSK 281 (351)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 666666777788888865
No 341
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.40 E-value=5.6e-11 Score=135.23 Aligned_cols=261 Identities=16% Similarity=0.157 Sum_probs=172.6
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-chhhh
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LKDID 292 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd-~~~L~ 292 (1016)
.++++.+|+++|.++.++.+.+|++++..++..++ . ++ +|++++-.|+.+...++ ..|++++.++ +++++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l--~--~g-~vl~~~p~y~~~~~~~~----~~g~~~~~~~d~~~l~ 120 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL--A--PG-RVLVLAPTYSEYARAWR----AAGHEVVELPDLDRLP 120 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh--C--CC-eEEEeCCCcHHHHHHHH----HcCCEEEEeCCHHHHH
Confidence 45778999999998888988888888877754443 2 45 69998888888877764 4588888875 55666
Q ss_pred c-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC-CCC----cccceEEEecC-ccccc
Q 001769 293 Y-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-PPG----ELGADIVVGSA-QRFGV 361 (1016)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~-~pg----~~GaDivvgs~-k~lg~ 361 (1016)
+ + .++++|++.+| |.+|.+.| +++|+++|+++|++++++ +...-.... +.. ..+-+|+++|. |.||.
T Consensus 121 ~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 198 (330)
T TIGR01140 121 AAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVD-EAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGL 198 (330)
T ss_pred hhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEE-CcccccCCccchhhHhccCCCEEEEEecchhhcC
Confidence 6 6 45778888888 68999988 677888899999999994 332111111 111 23567889997 87764
Q ss_pred cCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcc
Q 001769 362 PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 441 (1016)
Q Consensus 362 P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~ 441 (1016)
| |. .+|++++++++++.+... ....++++ . +..++. .++...
T Consensus 199 ~-G~---R~G~i~~~~~~~~~l~~~----------------------------~~~~~~s~-~---~q~~~~--~~l~~~ 240 (330)
T TIGR01140 199 A-GL---RLGFVVAHPALLARLREA----------------------------LGPWTVNG-P---ARAAGR--AALADT 240 (330)
T ss_pred c-hh---hhhheeCCHHHHHHHHhc----------------------------CCCCCchH-H---HHHHHH--HHHhch
Confidence 3 11 248999988877665210 00011111 1 111221 122222
Q ss_pred c-HHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCCHHHHHHHHHHcCceeecc------cCCeEEEEecc
Q 001769 442 G-LKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDE 513 (1016)
Q Consensus 442 G-l~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~te 513 (1016)
+ .+.+.+++..+.+++.+.|++++.+++... ..| +.+..+...++.+.|.++||.+.+. ..+.+|++++.
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f--~~~~~~~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~ 318 (330)
T TIGR01140 241 AWQAATRARLAAERARLAALLARLGGLEVVGGTALF--LLVRTPDAAALHEALARRGILIRDFDNFPGLDPRYLRFALPT 318 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeE--EEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC
Confidence 2 366778888999999999999864555432 222 3344555778999999999987542 23689999874
Q ss_pred CCCHHHHHHHHHHHh
Q 001769 514 TTTLEDVDKLFIVFA 528 (1016)
Q Consensus 514 ~~t~edid~ll~aL~ 528 (1016)
..++ ++|+++|+
T Consensus 319 --~~~~-~~~~~~l~ 330 (330)
T TIGR01140 319 --DEEN-DRLEEALA 330 (330)
T ss_pred --HHHH-HHHHHhhC
Confidence 3355 88888763
No 342
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=3.2e-11 Score=138.53 Aligned_cols=265 Identities=16% Similarity=0.167 Sum_probs=169.3
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchh---
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~g-d~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~--- 290 (1016)
++++.+|+.+|+++.++.+++|++.++..++.++. ++| |+|+++.-.++.+...+ +..|++++.+++++
T Consensus 64 ~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~---~~g~d~vlv~~P~y~~y~~~~----~~~g~~v~~v~~~~~~~ 136 (354)
T PRK04635 64 ELINAYSAYAGVAPEQILTSRGADEAIELLIRAFC---EPGQDSIACFGPTYGMYAISA----ETFNVGVKALPLTADYQ 136 (354)
T ss_pred HHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhc---CCCCCeEEEcCCChHHHHHHH----HHcCCEEEEEecCCCCC
Confidence 45678999999999999999999988877766653 256 89999998888766543 45688888877631
Q ss_pred --hhcc--CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC-CcEEEEEeccc-cccCCCCCCcc----cceEEEecC-cc
Q 001769 291 --IDYK--SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLL-ALTILKPPGEL----GADIVVGSA-QR 358 (1016)
Q Consensus 291 --L~~l--~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~-GalviV~a~~~-alg~l~~pg~~----GaDivvgs~-k~ 358 (1016)
++.+ .+++++|++.+| |.+|.+.|.+++.++++.. +++++++ +.. .+....+...+ .-=+++.|. |.
T Consensus 137 ~~~~~l~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivD-eay~~~~~~~s~~~~~~~~~~~iv~~S~SK~ 215 (354)
T PRK04635 137 LPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVD-EAYIEFCPEYSVADLLASYPNLVVLRTLSKA 215 (354)
T ss_pred CCHHHHHhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEe-CchHhhccCcchHHHHhhCCCEEEEechHHH
Confidence 1111 257899999998 6899999999999998864 6777773 221 11100010011 111466666 87
Q ss_pred ccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHh
Q 001769 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 438 (1016)
Q Consensus 359 lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~ 438 (1016)
||.| |--.||+++++++++.+-. +. . ..+.+... . .+++ .++
T Consensus 216 ~~l~----GlRlG~~i~~~~~~~~l~~-~~---------------------------~--~~~~~~~~-~-~~a~--~~l 257 (354)
T PRK04635 216 FALA----GARCGFTLANEELIEILMR-VI---------------------------A--PYPVPLPV-S-EIAT--QAL 257 (354)
T ss_pred hhhh----HHHHhhhhCCHHHHHHHHh-hc---------------------------C--CCCCCHHH-H-HHHH--HHH
Confidence 7533 2236899888877765511 00 0 00111111 1 1111 222
Q ss_pred CcccH---HHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeccc----CCeEEEEe
Q 001769 439 GPEGL---KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD----SNTVTASF 511 (1016)
Q Consensus 439 g~~Gl---~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~----~~~lris~ 511 (1016)
...|. ++..++..++.+++.+.|++++++++..+. -.-+.++++++.++.+.|.++||.++... ++.+|+|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~ 336 (354)
T PRK04635 258 SEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSF 336 (354)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe
Confidence 22333 444455666678899999988646665321 11133455557788889999999886542 46899996
Q ss_pred ccCCCHHHHHHHHHHHhC
Q 001769 512 DETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 512 te~~t~edid~ll~aL~~ 529 (1016)
. +.+|+++|+++|+.
T Consensus 337 ~---~~e~~~~l~~al~~ 351 (354)
T PRK04635 337 S---NRAETDKLIGLIRN 351 (354)
T ss_pred C---CHHHHHHHHHHHHH
Confidence 4 89999999999963
No 343
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.40 E-value=7.9e-11 Score=137.41 Aligned_cols=275 Identities=16% Similarity=0.139 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHH-Hhccc------cCCCCEEEEc-CCCCHHHHHHHHH-----hhcC
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQ------KGKKKTFIIA-SNCHPQTIDICIT-----RADG 278 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~-a~~~~------~~~gd~Vlvs-~~~Hps~~~~l~~-----~a~~ 278 (1016)
...++.+.++++++.+ .+.++++||.|+|+++. ++.+. +..+++||+. ...|..+...+.. +-..
T Consensus 83 ~~~~l~~~l~~~~~~~--~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~ 160 (396)
T PRK04073 83 QLGPWYEKVAKLTGKD--MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRG 160 (396)
T ss_pred HHHHHHHHHHhcCCCC--eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccC
Confidence 3455678899998865 47788999999998665 43321 0134566655 5688777655431 0000
Q ss_pred CC---eEEEEe---Cchhhhc-cCCCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEecccc-ccCCCC--
Q 001769 279 FD---IKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP-- 343 (1016)
Q Consensus 279 ~g---i~v~~v---d~~~L~~-l~~~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~a-lg~l~~-- 343 (1016)
++ ..+..+ |++++++ +++++++|++..+ |..|.+.| +++|.++|+++|++++++ +..+ +|--..
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D-Ev~~g~g~~g~~~ 239 (396)
T PRK04073 161 FGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIAD-EIQTGLGRTGKLF 239 (396)
T ss_pred CCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-cchhCCCcCcHHH
Confidence 11 012333 4456666 7778988888876 78898875 899999999999999993 3322 321110
Q ss_pred ---CCcccceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCcc
Q 001769 344 ---PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1016)
Q Consensus 344 ---pg~~GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsni 420 (1016)
......|+++. +|.+++ ||=-.|++.+++++.+.+.. +. ...| .
T Consensus 240 ~~~~~~~~pdi~~~-sK~lg~----gg~~ig~~~~~~~i~~~~~~----------~~----------------~~~t--~ 286 (396)
T PRK04073 240 ACDWDNVTPDMYIL-GKALGG----GVFPISCVAANRDILGVFTP----------GS----------------HGST--F 286 (396)
T ss_pred HhhhcCCCCCEEEe-cccccC----CCCcceEEEEcHHHHhhhcC----------CC----------------CCCC--C
Confidence 11123577664 477752 32125788888887766521 00 0011 1
Q ss_pred chhh-HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC-HHHHHHHHHHcC
Q 001769 421 CTAQ-ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-AHAIASAAYKIE 496 (1016)
Q Consensus 421 cT~~-~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~-~~~v~~~L~~~G 496 (1016)
+.+. +..+..+++ ..+..++ +.++..++.++|.+.|++++ ...+.. +.-.-+.+.++. +.++.++|.++|
T Consensus 287 ~~~~~~~aaa~aaL--~~~~~~~---l~~~~~~~~~~l~~~L~~l~-~~~i~~~~~~g~~~~~~~~~~~~~~~~~l~~~G 360 (396)
T PRK04073 287 GGNPLACAVSIAAL--EVLEEEK---LPERSLELGEYFKEQLKEID-NPMIKEVRGRGLFIGVELNEPARPYCEALKEEG 360 (396)
T ss_pred CCCHHHHHHHHHHH--HHHHhcC---HHHHHHHHHHHHHHHHHhhc-CCcccceecceEEEEEEecchHHHHHHHHHHCC
Confidence 1111 121222222 3332333 44666778999999998874 221211 111113344444 778999999999
Q ss_pred ceeecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 497 I~~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
|.+....++.||++++..+|++|+++++++|.
T Consensus 361 v~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~ 392 (396)
T PRK04073 361 LLCKETHETVIRFAPPLVITKEELDWAFEKIK 392 (396)
T ss_pred eEEecCCCCEEEEECCcccCHHHHHHHHHHHH
Confidence 99876556789999999999999999999985
No 344
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.40 E-value=5.2e-11 Score=138.88 Aligned_cols=216 Identities=14% Similarity=0.139 Sum_probs=140.6
Q ss_pred ccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC---ce-eeecCChHHHHHHH
Q 001769 589 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAG 664 (1016)
Q Consensus 589 ~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~---~~-~l~~~sGa~ae~a~ 664 (1016)
..++.|+.|.+.+++.......-........-|.+ .+|..++...+.+++.+..|.+ .. .+..+.|++. +.
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~--al 103 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGLASYPT---TAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE--AL 103 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCC---CCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH--HH
Confidence 35678888887776432221110000111223333 4677777777778887777854 32 5655555442 23
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-C
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-T 741 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~ 741 (1016)
.++++.+.. .| +.++.|+++.+.+..+...+.+.|.+++.||++++ +.+|++++++++. +++++|++.+|+ .
T Consensus 104 ~~~~~~l~~-~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NP 178 (396)
T PRK09147 104 FAFAQTVID-RD-GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFVCSPGNP 178 (396)
T ss_pred HHHHHHHcC-CC-CCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh---hccEEEEEcCCCCC
Confidence 333443321 10 12678999998887777778899999999999754 4799999998887 689999999995 6
Q ss_pred Ccccc--ccHHHHHHHHHHcCcEEEEEcccccc-ccCc-CCC------CccCCc-----EEEeCccccccCCCCCCCCeE
Q 001769 742 HGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL-TSP------GYIGAD-----VCHLNLHKTFCIPHGGGGPGM 806 (1016)
Q Consensus 742 ~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a-~~~l-~~p------g~~GaD-----i~~~s~hK~~~~phg~GGPg~ 806 (1016)
+|.+. .++++|+++|+++++++++|-+...- ...- ..+ ..++.| +++.|+.|.|++| |..+
T Consensus 179 TG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----GlRi 254 (396)
T PRK09147 179 TGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP----GLRS 254 (396)
T ss_pred cCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCc----ccee
Confidence 78776 46888999999999999999765311 1110 000 012222 7788999988654 5779
Q ss_pred EEEEEccccccc
Q 001769 807 GPIGVKKHLAPF 818 (1016)
Q Consensus 807 G~i~~~~~l~~~ 818 (1016)
|++++++++.+.
T Consensus 255 G~~~~~~~l~~~ 266 (396)
T PRK09147 255 GFVAGDAALLKK 266 (396)
T ss_pred eeecCCHHHHHH
Confidence 999988766544
No 345
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.40 E-value=5.6e-11 Score=138.79 Aligned_cols=233 Identities=12% Similarity=0.119 Sum_probs=150.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCC--c-eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEE
Q 001769 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~--~-~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~v 704 (1016)
+|..++...+.+++.+-.|.+ . ..+..++|++. +..++++.+. .+++.|+++++.|..+...+...|+++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~--al~~~~~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~ 141 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQD--GLVHLPMVYA-----NPGDIILVPDPGYTAYETGIQMAGATS 141 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEECCCCccchHHHHHhcCCEE
Confidence 577777777777777766753 3 45666666542 2333333331 367899999998888888889999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cCc--
Q 001769 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-- 776 (1016)
Q Consensus 705 v~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~l-- 776 (1016)
+.++++++ ..+|++++++++. +++++|++++|+ .+|.+. ..+++|+++|+++|+++++|.+...-. .+-
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 142 YYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 99999765 3679999999887 689999999984 688887 238889999999999999998753111 110
Q ss_pred CC----CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhH
Q 001769 777 TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1016)
Q Consensus 777 ~~----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~ 852 (1016)
.. +....-.|++.|++|.|+.| |..+|++++++++.+.+-.. +.....+. +...
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~~i~~~~l~~~~~~~--------------~~~~~~~~----s~~~ 276 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLA----GSRIGYMIGNEEIVRALTQF--------------KSNTDYGV----FLPI 276 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCc----cceeEEEecCHHHHHHHHHH--------------HhhcccCC----CHHH
Confidence 00 11112347778999999644 56799999887665443110 00000011 1111
Q ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
..++..+|. -|.+-+++..+....+.+++.+.|++ ++++.
T Consensus 277 q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 317 (399)
T PRK07681 277 QKAACAALR-NGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD 317 (399)
T ss_pred HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 222233333 23333555555666778888888887 44443
No 346
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.40 E-value=1.3e-10 Score=133.63 Aligned_cols=296 Identities=13% Similarity=0.151 Sum_probs=183.7
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
+.|..|...|+.+.+++.+.-.-...|.+ ++ ..++++.+|+++|.++.++.+++|++.++..++.++ .
T Consensus 26 ~~~~~~~~~p~~~~~a~~~~~~~~~~y~~------~~----~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l--~ 93 (356)
T PRK08056 26 SANINPLGMPVSLKRAIIDNLDCAERYPD------VE----YRHLHQALARHHQVPASWILAGNGETESIFAVVSGL--K 93 (356)
T ss_pred ccccCCCCCCHHHHHHHHHHHHhcccCcC------cc----HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh--C
Confidence 45666667777776665432111222321 11 356778999999999989999999987776665554 2
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHH
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGD 317 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---------~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~e 317 (1016)
+++ +++..-.++.+...+ +..|++++.++.+ ++.+ +.+++++|++.+| |.+|.+.+ +++
T Consensus 94 --~g~-viv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~ 166 (356)
T PRK08056 94 --PRR-AMIVTPGFAEYRRAL----QQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQA 166 (356)
T ss_pred --CCC-EEEeCCCcHHHHHHH----HHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHH
Confidence 555 455555566555544 3468888887642 1223 5578899999888 68999888 888
Q ss_pred HHHHHHhCCcEEEEEeccccc---c--CCCCCCcccceEEEecC-ccccccCCCCCcceEEEEee-hhhhhcCCCceEee
Q 001769 318 FIKNAHANGVKVVMATDLLAL---T--ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGV 390 (1016)
Q Consensus 318 I~~lah~~GalviV~a~~~al---g--~l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~-~~l~~~lpgrivG~ 390 (1016)
|+++|+++|++++++.-...+ + .+.....+.-+|+++|. |.|+.| |--.||+++. +++++.+-
T Consensus 167 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~------ 236 (356)
T PRK08056 167 IAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMR------ 236 (356)
T ss_pred HHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCc----chhheeeecCCHHHHHHHH------
Confidence 999999999999994311111 1 00011234567888887 888654 2346888763 34443330
Q ss_pred eecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc
Q 001769 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1016)
Q Consensus 391 s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~ 470 (1016)
+... +.+. ..+ +..++.. .+.+..-++++.++..++.+++.+.|++++++.+.
T Consensus 237 ----------------------~~~~--~~~~-~~~-~~~~a~~-~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 289 (356)
T PRK08056 237 ----------------------RQQM--PWSI-NAF-AALAGEV-ILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW 289 (356)
T ss_pred ----------------------HhCC--CCch-hHH-HHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc
Confidence 0000 1111 122 2222221 12223335666777888889999999888437665
Q ss_pred CC-CCccEEEEecCC-HHHHHHHHHHcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 471 GL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 471 ~~-~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+ ..| +.++++. ..++.+.|.++||.++.. .++.|||++. +.++.++|+++|.
T Consensus 290 ~~~~~~--~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~ 350 (356)
T PRK08056 290 PGRANY--LFLRCERPDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALR 350 (356)
T ss_pred CCCCcE--EEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHH
Confidence 32 222 3445544 678999999999987542 1368999986 6788888888885
No 347
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.39 E-value=7.9e-11 Score=136.97 Aligned_cols=266 Identities=15% Similarity=0.155 Sum_probs=171.4
Q ss_pred HHHHHHHHHc------CCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 215 NFQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 215 e~q~~iA~L~------G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
++++.+|+++ +.++.++.+++|++.++..++.++. +++++|++++..|+.+...++ ..|++++.++.
T Consensus 72 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~---~~gd~vl~~~p~y~~~~~~~~----~~g~~~~~~~~ 144 (393)
T PRK05764 72 ELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALL---DPGDEVIIPAPYWVSYPEMVK----LAGGVPVFVPT 144 (393)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhc---CCCCEEEecCCCCcchHHHHH----HcCCEEEEEec
Confidence 4556666665 3456678899999988877766652 278999999999998776654 35788777654
Q ss_pred ----------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCC-C----C-----
Q 001769 289 ----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL-K----P----- 343 (1016)
Q Consensus 289 ----------~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l-~----~----- 343 (1016)
+++++ +++++++|++.+| |.+|.+. ++++|+++|+++|++++++ +..+.... . +
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 145 GEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSD-EIYEKLVYDGAEFTSIASLS 223 (393)
T ss_pred CcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEe-ccccceeeCCCCcccHHHcC
Confidence 33444 6678899999988 6799885 5889999999999999994 22221111 0 0
Q ss_pred CCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 344 pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
+...+-+++++|. |.|+.| |.-.|++..++++.+.+.... . ..+.+.
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~~-------------------------~-~~~~~~-- 271 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKLQ-------------------------S-HSTSNP-- 271 (393)
T ss_pred CCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHHH-------------------------h-hcccCC--
Confidence 1234567888886 877644 234689988887776551100 0 001111
Q ss_pred hhHHHHHHHHH-HHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEEcCCC--CccEEEEecCC--------HHHHHH
Q 001769 423 AQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLP--FFDTVKVKCAD--------AHAIAS 490 (1016)
Q Consensus 423 ~~~l~a~~Aa~-y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G~~~l~~~~--~~~~v~i~~~~--------~~~v~~ 490 (1016)
..+ +..++. .+. ...+-++++.++..++.+++++.|+++ | +++..+. ++ +.+.++. +.++.+
T Consensus 272 -~~~-~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~ 345 (393)
T PRK05764 272 -TSI-AQYAAVAALN-GPQDEVEEMRQAFEERRDLMVDGLNEIPG-LECPKPEGAFY--VFPNVSKLLGKSITDSLEFAE 345 (393)
T ss_pred -ChH-HHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHhhCCC-CcccCCCcceE--EEEecccccccccCCHHHHHH
Confidence 111 111111 111 123446677777888889999999988 5 7765321 22 1222221 367887
Q ss_pred HHH-HcCceeecc----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 491 AAY-KIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 491 ~L~-~~GI~~~~~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.|. ++||.+..- .++.+|+|+. ++++++++.++.|.
T Consensus 346 ~l~~~~gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~ 386 (393)
T PRK05764 346 ALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIE 386 (393)
T ss_pred HHHHhCCEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHH
Confidence 775 579987542 2478999987 47999999998886
No 348
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.39 E-value=3.3e-10 Score=131.44 Aligned_cols=269 Identities=13% Similarity=0.091 Sum_probs=166.1
Q ss_pred HHHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 215 NFQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 215 e~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
++++.+|+++ |. +.. ++.+++|++.++..++.++. ++||+|++++-.++.+...++ ..|++++.++
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~---~~gd~vlv~~P~y~~~~~~~~----~~G~~v~~v~ 143 (383)
T TIGR03540 71 AYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFV---NPGDIVLVPDPGYPVYRIGTL----FAGGEPYEMP 143 (383)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhC---CCCCEEEEeCCCCcchHHHHH----hcCCEEEEEe
Confidence 3445555554 44 334 46677888888777666552 379999999999998777654 3577777665
Q ss_pred c----------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCC-----CCCC--
Q 001769 288 L----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KPPG-- 345 (1016)
Q Consensus 288 ~----------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l-----~~pg-- 345 (1016)
. +++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +....... .+..
T Consensus 144 ~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D-e~y~~l~~~~~~~~~~~~~ 222 (383)
T TIGR03540 144 LKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHD-NAYSEITFDGYKAPSFLEV 222 (383)
T ss_pred cCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEe-cchhhhccCCCCCcCcccC
Confidence 4 23333 5668899999988 68999887 789999999999999984 33221000 0001
Q ss_pred --cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 346 --ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 346 --~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
...-.|+++|. |.||.| |=-.|++..++++++.+.. .+.+...++
T Consensus 223 ~~~~~~~i~~~SfSK~~g~~----GlRiG~~i~~~~l~~~~~~----------------------------~~~~~~~~~ 270 (383)
T TIGR03540 223 DGAKDVGIEFHSLSKTYNMT----GWRIGMAVGNADLIAGLGK----------------------------VKTNVDSGV 270 (383)
T ss_pred CCcccCEEEEEecccccCCc----cceeeEEeCCHHHHHHHHH----------------------------HHHhcccCC
Confidence 11235677776 877533 1126898888777665410 000011111
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC---HHHHHHHHH-HcCce
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMN 498 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~v~~~L~-~~GI~ 498 (1016)
+... ..++..+.-.+.+-++++.++..++..++.+.|++.| +.+..+..---+.+.++. ..++.+.|. ++||.
T Consensus 271 ~~~~--q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~ 347 (383)
T TIGR03540 271 FQAI--QYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVV 347 (383)
T ss_pred ChHH--HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEE
Confidence 1111 1111111112334466777788888999999999987 876542111013344442 678888875 67998
Q ss_pred eecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 499 LRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 499 ~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+... .++.+|+++. .+.+++.+.++.|+
T Consensus 348 v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 348 VTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIK 381 (383)
T ss_pred EecchhhCccCCCeEEEEec--CCHHHHHHHHHHHh
Confidence 8642 2468999997 45777777777664
No 349
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.39 E-value=9.6e-11 Score=136.80 Aligned_cols=267 Identities=13% Similarity=0.121 Sum_probs=170.8
Q ss_pred HHHHHHHHc----C--CCC-ccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----G--LPM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G--~~~-anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.||+++ | .++ .++.+++|++.+...++.++. ++||+|+++.-.|+.+...++ ..|++++.+++
T Consensus 74 lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~---~~Gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~ 146 (399)
T PRK07681 74 FHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYA---NPGDIILVPDPGYTAYETGIQ----MAGATSYYMPL 146 (399)
T ss_pred HHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhC---CCCCEEEECCCCccchHHHHH----hcCCEEEEEec
Confidence 445566555 3 355 578889999988877766653 379999999999998887764 35888877654
Q ss_pred h----------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC-----C----C
Q 001769 289 K----------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-----P----P 344 (1016)
Q Consensus 289 ~----------~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~-----~----p 344 (1016)
+ ++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +..+.-... + +
T Consensus 147 ~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~D-e~y~~~~~~~~~~~~~~~~~ 225 (399)
T PRK07681 147 KKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHD-FAYAEFYFDGNKPISFLSVP 225 (399)
T ss_pred CCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEe-ccchhheeCCCCCCChhhCC
Confidence 2 2333 5567899999988 78999886 788999999999999984 322211100 0 1
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 345 g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
+...-.|+++|. |.|+.| |=-.||+.+++++++.+- +.+.+...|++
T Consensus 226 ~~~~~~i~~~S~SK~~~~~----GlRiG~~i~~~~l~~~~~----------------------------~~~~~~~~~~s 273 (399)
T PRK07681 226 GAKEVGVEINSLSKSYSLA----GSRIGYMIGNEEIVRALT----------------------------QFKSNTDYGVF 273 (399)
T ss_pred CCcccEEEEeecccccCCc----cceeEEEecCHHHHHHHH----------------------------HHHhhcccCCC
Confidence 112235778886 877543 123689988777765541 00001111211
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC---HHHHHHHHHH-cCc
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD---AHAIASAAYK-IEM 497 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~---~~~v~~~L~~-~GI 497 (1016)
.. ...++..+.-.+.+-+++..++..++.+++.+.|++.| +++..+ .+| +.++++. ..++.+.|.+ +||
T Consensus 274 ~~--~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~~g~f--~~~~l~~~~~~~~~~~~l~~~~gv 348 (399)
T PRK07681 274 LP--IQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-WNVDKPAGSMF--VWAEIPKGWTSLSFAYALMDRANV 348 (399)
T ss_pred HH--HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeeE--EEEECCCCCCHHHHHHHHHHhCCE
Confidence 11 11122211112223456666777788889999999887 776422 222 2334432 6788888887 899
Q ss_pred eeecc------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 498 NLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 498 ~~~~~------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.+.+. .++.+|+++. .+.+++++.++.|..
T Consensus 349 ~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 349 VVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred EEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 87542 1468999998 468999999999975
No 350
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.39 E-value=6.4e-11 Score=124.89 Aligned_cols=304 Identities=20% Similarity=0.232 Sum_probs=190.6
Q ss_pred ChHHHHHHHHhCCCcccccCCChhHHhhhHHH-----HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCC
Q 001769 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLE-----SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK 254 (1016)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le-----~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~ 254 (1016)
+|+....++++. .-.|+--. -...|+|. .|..|-..+++++|||. +-.+.|+-.+-.|++-++. ++
T Consensus 29 Lt~eArkal~E~---gDGYSvCD-~C~~Grldei~kPpI~~F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~---~~ 99 (382)
T COG1103 29 LTEEARKALLEW---GDGYSVCD-FCLEGRLDEITKPPIKDFLEDLAEFLGMDE--VRVTAGAREAKFAVMHALC---KE 99 (382)
T ss_pred CCHHHHHHHHHh---cCCcchhh-hhccCccccccCCcHHHHHHHHHHHhCCce--eeecccchhhHHHHHHHhc---cC
Confidence 555555567753 33442110 01134443 45677788999999998 7778888877777776764 37
Q ss_pred CCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----------hh----hhc-c---CCCEeEEEEEcCC-CCeeeccH
Q 001769 255 KKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KD----IDY-K---SGDVCGVLVQYPG-TEGEVLDY 315 (1016)
Q Consensus 255 gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----------~~----L~~-l---~~~t~~V~v~~pn-~~G~i~dl 315 (1016)
+|-|+++.++|-++.-. |++.|.++..+|- +. ++. . .+...+.++++|+ .+|.+.|.
T Consensus 100 gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Da 175 (382)
T COG1103 100 GDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADA 175 (382)
T ss_pred CCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhh
Confidence 99999999999776655 4556888888763 11 222 1 1346777889985 78999999
Q ss_pred HHHHHHHHhCCcEEEE-EeccccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 316 GDFIKNAHANGVKVVM-ATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 316 ~eI~~lah~~GalviV-~a~~~alg~l~-~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
+.++++||++|+++++ ++ ...|-+. +..+.|+||+|+|+ |++.. .|| .|+|+.++++.+.+- |..|
T Consensus 176 kkva~ic~e~gvPlllN~A--Yt~Grmpvs~ke~g~DFiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~-r~Sg--- 244 (382)
T COG1103 176 KKVAKICREYGVPLLLNCA--YTVGRMPVSGKEIGADFIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVL-RRSG--- 244 (382)
T ss_pred HHHHHHHHHcCCceEeecc--eeeccccccccccCCCEEEecCccchhc----cCC-eeEEeehhHHHHHHH-hhcc---
Confidence 9999999999999999 33 2444332 34688999999999 77642 333 589999998766541 1111
Q ss_pred cCCCCcceeeecccccccccccccCCccchhh--HHHHHHHHH-HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 001769 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQ--ALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 469 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqhiRRekaTsnicT~~--~l~a~~Aa~-y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l 469 (1016)
+. |. ..|- ...-||.. ++..+||++ +. .+-. .......++++++.++|+++||++.
T Consensus 245 ----~~-~~----------~KEv-ellGCT~rGapivTlmASfP~V----~eRV-krWdeEv~kaR~fv~elEkigg~~q 303 (382)
T COG1103 245 ----RA-FP----------KKEV-ELLGCTVRGAPIVTLMASFPHV----VERV-KRWDEEVEKARWFVAELEKIGGVKQ 303 (382)
T ss_pred ----cc-cc----------ccee-eeecccccCchHHHHHhcCHHH----HHHH-HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 10 10 0000 01225543 444566665 11 1111 1234456899999999999987877
Q ss_pred cC-CCCc-cEEEEecCCHHHHHHHHHHcCceeec---------cc---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 470 QG-LPFF-DTVKVKCADAHAIASAAYKIEMNLRV---------VD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 470 ~~-~~~~-~~v~i~~~~~~~v~~~L~~~GI~~~~---------~~---~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++ .|.- +-+.|..|.-.+|++.-..+|+++.. +. ...+-+| ...-+.|+++..+++|.+
T Consensus 304 lG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afke 376 (382)
T COG1103 304 LGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKE 376 (382)
T ss_pred hCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEE-eecCCHHHHHHHHHHHHH
Confidence 75 3433 33445555455666655555555421 01 1234444 245689999999999863
No 351
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.39 E-value=1.1e-11 Score=144.34 Aligned_cols=213 Identities=12% Similarity=0.091 Sum_probs=139.1
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
...++++.+++++|.+. .+..++|.++..++++++. +++|+|++++..|++....+.+.+.++++++.
T Consensus 44 ~~~~LE~~lA~~~g~e~-al~~~sG~~a~~~~i~~l~--------~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~--- 111 (392)
T PLN03227 44 AHLELEQCMAEFLGTES-AILYSDGASTTSSTVAAFA--------KRGDLLVVDRGVNEALLVGVSLSRANVRWFRH--- 111 (392)
T ss_pred HHHHHHHHHHHHhCCCc-EEEecCcHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHHcCCeEEEeCC---
Confidence 35589999999999885 4666777655544444431 36789999999998776666777888888876
Q ss_pred CCCCHHHHHHHHHcC-----------CCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCc----
Q 001769 713 GNINIEELRKAAEAN-----------RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---- 776 (1016)
Q Consensus 713 g~iD~~~L~~~i~~~-----------~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l---- 776 (1016)
.|++++++.++.. .++++.|+++.+ |..|.+. |+++|+++|+++|+++++|.++.++..+-
T Consensus 112 --~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g 188 (392)
T PLN03227 112 --NDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFHYRLILDESFSFGTLGKSGRG 188 (392)
T ss_pred --CCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcCCEEEEECcccccccCCCCCc
Confidence 3556555543211 146889999987 4678886 89999999999999999998875332221
Q ss_pred ------CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccch-
Q 001769 777 ------TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS- 849 (1016)
Q Consensus 777 ------~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~- 849 (1016)
..| ..|+|+++++++|+++ |.+|++++++++...+.. .+ .+.+ +.++
T Consensus 189 ~~~~~g~~p-~~~~Div~~slsk~~g-------~~gg~v~~~~~~~~~~~~--~~-------------~~~~---~~~~~ 242 (392)
T PLN03227 189 SLEHAGLKP-MVHAEIVTFSLENAFG-------SVGGMTVGSEEVVDHQRL--SG-------------SGYC---FSASA 242 (392)
T ss_pred HHHHcCCCC-CCCceEEEeechhhhh-------ccCcEEecCHHHHHHHHH--hC-------------cCcc---ccCCC
Confidence 122 3478999999999763 445677777765543210 00 0000 1111
Q ss_pred -hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 850 -ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 850 -a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+..+.++.+.+..+-. -.++.++..++++|++++|++
T Consensus 243 ~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 243 PPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred CHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHh
Confidence 2223333333332211 234567788999999999985
No 352
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.38 E-value=3.8e-10 Score=130.07 Aligned_cols=254 Identities=13% Similarity=0.086 Sum_probs=162.0
Q ss_pred CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhcc-CCCEeEEEEE
Q 001769 226 LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYK-SGDVCGVLVQ 304 (1016)
Q Consensus 226 ~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~l-~~~t~~V~v~ 304 (1016)
.++.++.+++|++.++..+..++.. ++||+|++++-.|+.+...++ ..|++++.++ +++.+ .+++++|++.
T Consensus 84 ~~~~~I~it~G~~~~i~~~~~~l~~--~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~--~~~~l~~~~~~~v~~~ 155 (364)
T PRK07865 84 LDPAAVLPVIGSKELVAWLPTLLGL--GPGDVVVIPELAYPTYEVGAR----LAGATVVRAD--SLTELGPQRPALIWLN 155 (364)
T ss_pred CCcccEEEccChHHHHHHHHHHHcC--CCCCEEEECCCCcccHHHHHH----hcCCEEEecC--ChhhCCcccceEEEEc
Confidence 4567898889998887665444422 278999999999998877764 3588887775 23332 3578889988
Q ss_pred cC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC--CCC---------cccceEEEecC-ccccccCCCCCc
Q 001769 305 YP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK--PPG---------ELGADIVVGSA-QRFGVPMGYGGP 368 (1016)
Q Consensus 305 ~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~--~pg---------~~GaDivvgs~-k~lg~P~g~GGP 368 (1016)
+| |.+|.+.+ +++|.++|+++|+++++| +..+.-... .+. +..-.|+++|. |.|+.| |-
T Consensus 156 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----Gl 230 (364)
T PRK07865 156 SPSNPTGRVLGVDHLRKVVAWARERGAVVASD-ECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA----GY 230 (364)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-cchhhhccCCCCCccccccccCCccceEEEEeechhccCCC----ce
Confidence 88 68998764 688899999999999984 332211110 011 11224778886 888644 22
Q ss_pred ceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHH
Q 001769 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1016)
Q Consensus 369 ~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~ 448 (1016)
-.||+.+++++++.+- +.+...+.|++......++.+ +...+-+++..+
T Consensus 231 RiG~i~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~q~~~~~~---l~~~~~~~~~~~ 279 (364)
T PRK07865 231 RAGFVAGDPALVAELL----------------------------EVRKHAGMMVPAPVQAAMVAA---LGDDAHVREQRE 279 (364)
T ss_pred eeEEEecCHHHHHHHH----------------------------HHHHhcCCCcCHHHHHHHHHH---hCCHHHHHHHHH
Confidence 4688888777665541 001111122222222222211 111234566677
Q ss_pred HHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC-HHHHHHHHHHcCceeecc------cCCeEEEEeccCCCHHH
Q 001769 449 RVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLED 519 (1016)
Q Consensus 449 ~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~------~~~~lris~te~~t~ed 519 (1016)
+..++.+++.+.|++.| +.+..+ .++ +.+..+. ..++.+.|.++||.+.+. .++.+|+++.. ++++
T Consensus 280 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~ 354 (364)
T PRK07865 280 RYARRRAVLRPALEAAG-FRVDHSEAGLY--LWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA--TDER 354 (364)
T ss_pred HHHHHHHHHHHHHHHcC-CcccCCCccEE--EEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC--CHHH
Confidence 77888889999998886 765432 222 2334333 678889999999987441 24689999975 5899
Q ss_pred HHHHHHHHh
Q 001769 520 VDKLFIVFA 528 (1016)
Q Consensus 520 id~ll~aL~ 528 (1016)
+++.++.|+
T Consensus 355 ~~~~~~~l~ 363 (364)
T PRK07865 355 IAAAVERLA 363 (364)
T ss_pred HHHHHHHhh
Confidence 999998875
No 353
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.38 E-value=5.4e-11 Score=135.90 Aligned_cols=220 Identities=15% Similarity=0.171 Sum_probs=144.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEc
Q 001769 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~ 708 (1016)
|..+...++++.+++++|.+. .+..++|+++.+. +++.+. +++++|++++..|+.+...+.+.|.+++.++
T Consensus 58 g~~~~~~~l~~~la~~~~~~~-~i~~~~G~~~~~~---~l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~ 128 (360)
T TIGR00858 58 GNSPLHEELEEELAEWKGTEA-ALLFSSGYLANVG---VISALV-----GKGDLILSDALNHASLIDGCRLSGARVRRYR 128 (360)
T ss_pred CCcHHHHHHHHHHHHHhCCCC-EEEECchHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEec
Confidence 334456688899999998654 5667777665433 333331 3578999999989888877888999998887
Q ss_pred CCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcC-CC------
Q 001769 709 TDAKGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP------ 779 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~-~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~-~p------ 779 (1016)
. +|+++++++++.+. +++++|++.+++ .+|.+. |+++|.++|+++|+++++|.++.....+.. .+
T Consensus 129 ~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 202 (360)
T TIGR00858 129 H-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFG 202 (360)
T ss_pred C-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcC
Confidence 5 69999999997432 357888888774 678887 899999999999999999998753221111 00
Q ss_pred -CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 780 -GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 780 -g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
...+.||++.|+||+|+. +| |+++.++++.+.+.... .....+. ..++ ..++.+.+
T Consensus 203 ~~~~~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~-~~~~----~~~~a~~~ 259 (360)
T TIGR00858 203 LKPEPVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINRA-----------RTLIFST-ALPP----AVAAAALA 259 (360)
T ss_pred CCccCCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHhC-----------ccceecC-CCCH----HHHHHHHH
Confidence 023678999999999953 33 77887776554431100 0000000 1111 11222233
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.+..+. .+.+..++...+.+++.+.|++
T Consensus 260 al~~~~--~~~~~~~~~~~~~~~l~~~L~~ 287 (360)
T TIGR00858 260 ALELIQ--EEPWRREKLLALIARLRAGLEA 287 (360)
T ss_pred HHHHHh--hCHHHHHHHHHHHHHHHHHHHH
Confidence 343332 1345677888899999999987
No 354
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.38 E-value=7.7e-12 Score=138.48 Aligned_cols=242 Identities=18% Similarity=0.155 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH---HHHhCCcEEEEEc
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVG 708 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~---~a~~~G~~vv~v~ 708 (1016)
+...++++.+++++|. ...++..||++++..++.+.. .++..|++...+|-.... .....++....+.
T Consensus 35 ~~~~~~e~~~ae~~g~-~a~~Fv~sGT~aN~lal~~~~--------~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~ 105 (342)
T COG2008 35 PTTNALEQRIAELFGK-EAALFVPSGTQANQLALAAHC--------QPGESVICHETAHIYTDECGAPEFFGGGQKLPIV 105 (342)
T ss_pred HHHHHHHHHHHHHhCC-ceEEEecCccHHHHHHHHHhc--------CCCCeEEEeccccceecccCcHHHHcCCceeccC
Confidence 3456888999999999 445667788887744443321 256689998888954332 2233344444444
Q ss_pred CCCCCCCCHHHHHHHHHc----CCCCEEEEEEEcCCCCcccc--ccHHHHHHHHHHcCcEEEEEcccc-ccccCcCCC--
Q 001769 709 TDAKGNINIEELRKAAEA----NRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGLTSP-- 779 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~----~~~~t~~v~i~~Pn~~G~i~--~di~~I~~ia~~~g~lv~vDga~~-~a~~~l~~p-- 779 (1016)
..++|.+++++|+++|.. |.+...++.+++++..|.+. ..|++|+++||++|+.+|+|||-. +++..+..+
T Consensus 106 ~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~ 185 (342)
T COG2008 106 PGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALK 185 (342)
T ss_pred CCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHH
Confidence 457899999999998863 22334555666677778876 357788899999999999999853 233333322
Q ss_pred -CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHH
Q 001769 780 -GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 780 -g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a 858 (1016)
-..++|++.+.++|.+ |.|+..+++.+.+++....-+ .|..|...+ ++..++++|.
T Consensus 186 ~~~~~~D~v~~~~tK~g------~~~~gAiv~gn~~~~~~a~~~-------------rK~~Ggl~~----k~r~laA~~~ 242 (342)
T COG2008 186 TIKSYVDSVSFCLTKGG------GAPVGAIVFGNRDFAKRARRW-------------RKRAGGLMR----KARFLAAQGL 242 (342)
T ss_pred HHHhhCCEEEEecccCC------cceeeeEEEcCHHHHHHHHHH-------------HHHhcccHh----hhhHHHHHHH
Confidence 2457999999999964 455556677776665543210 111222111 2334444454
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCccccCCCCceeeEEEEEecC
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
|.. ..+-.+....+....|++|++.|.+ ++++.+| +..|++-++++.
T Consensus 243 ~~l--~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~~ 291 (342)
T COG2008 243 YAL--EDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLPE 291 (342)
T ss_pred HHH--hccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECCh
Confidence 433 3333455566666669999999984 6888875 345666666653
No 355
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.38 E-value=2.4e-11 Score=132.80 Aligned_cols=304 Identities=19% Similarity=0.239 Sum_probs=189.4
Q ss_pred HhccccCCCccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCc----eeeecC
Q 001769 580 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPN 655 (1016)
Q Consensus 580 l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~----~~l~~~ 655 (1016)
++++|+....-|-.||||- .|.+.+-.|-.+ ||.-+-| .-++..-+|+.--+.||+|. +++||.
T Consensus 46 IaSENFts~aVmeAlGS~l--tNKYSEGyPG~R--YYGGne~--------ID~iE~LCq~RALeaF~ldp~kWGVNVQp~ 113 (477)
T KOG2467|consen 46 IASENFTSRAVMEALGSCL--TNKYSEGYPGAR--YYGGNEY--------IDQIELLCQKRALEAFGLDPEKWGVNVQPY 113 (477)
T ss_pred eecccchHHHHHHHHhHHh--hcccccCCCccc--ccCcchH--------HHHHHHHHHHHHHHHhCCCHHHCceeeccC
Confidence 4566665434455788872 344555544333 3222211 22344446677778999994 589999
Q ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCEEEE---cCCCccccHHHHHhCCc-------EEEEEcCC-CCCCCCHHHHHHHH
Q 001769 656 AGAAGEYAGLMVIRAYHKARGDHHRNVCII---PVSAHGTNPATAAMCGM-------KIVSVGTD-AKGNINIEELRKAA 724 (1016)
Q Consensus 656 sGa~ae~a~l~air~~~~~~g~~~~~~Vlv---~~saHg~~~~~a~~~G~-------~vv~v~~d-~~g~iD~~~L~~~i 724 (1016)
||+-+++++..++. .+.++|.- |+-.|-+|.-......+ +-....+| ..|.+|.|.|++..
T Consensus 114 SGSPANfavYtall--------~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A 185 (477)
T KOG2467|consen 114 SGSPANFAVYTALL--------KPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTA 185 (477)
T ss_pred CCCchhhHHHhhhc--------CCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHH
Confidence 99999988887775 25566654 44444444322111111 11112234 35999999999877
Q ss_pred HcCCCCEEEEEEEcCCCCccccccHHHHHHHHHHcCcEEEEEcccccccc---CcCCCCccCCcEEEeCccccccCCCCC
Q 001769 725 EANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---GLTSPGYIGADVCHLNLHKTFCIPHGG 801 (1016)
Q Consensus 725 ~~~~~~t~~v~i~~Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~---~l~~pg~~GaDi~~~s~hK~~~~phg~ 801 (1016)
.. -+++.|+.....+.-.+ |.+.+.+||.+.|+.+.+|.|+..++. ...+|.++ +|||+...||++
T Consensus 186 ~~--frPk~iiaG~SaY~R~~--DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsL------ 254 (477)
T KOG2467|consen 186 TL--FRPKLIIAGTSAYSRLI--DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSL------ 254 (477)
T ss_pred Hh--cCCcEEEeccccchhhc--cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccc------
Confidence 63 45666776665555555 799999999999999999998853333 34467765 899999999999
Q ss_pred CCCeEEEEEEcccccccCCCCccccCCC--CCCCC-c--CCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHH
Q 001769 802 GGPGMGPIGVKKHLAPFLPSHPVVSTGG--IPAPE-K--SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1016)
Q Consensus 802 GGPg~G~i~~~~~l~~~lpg~~~g~~g~--~~~re-~--~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~ 876 (1016)
.||..|.|..++.....-|+. |. +...| + ..-.+...+.|. +.-+++.|.| |+.-....+++..++.+
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~-----g~~i~ydlE~kINfaVFP~lQGGPH-NhtIaalAvA-LkQa~tpefk~Yq~qV~ 327 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQ-----GKEILYDLEDKINFAVFPGLQGGPH-NHTIAALAVA-LKQAMTPEFKEYQKQVL 327 (477)
T ss_pred cCCcceeEEEeccCCcCCCCC-----CCcceechhhhhhhhccccccCCCC-cchHHHHHHH-HHhhCCHHHHHHHHHHH
Confidence 689899999987544332221 11 00011 0 000111112233 2233344444 44445556999999999
Q ss_pred HHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecCc---hhHHHHHHHHHH
Q 001769 877 LNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGL---KEELDRYCDALI 924 (1016)
Q Consensus 877 ~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~~---~~~ld~f~~~l~ 924 (1016)
.||+.|+++|.+ +|++.-- |.-.|-+++|+++. .....+.|+.+.
T Consensus 328 ~Nakala~~l~~~Gy~lvtg---GTDnHlvLvDLr~~G~dGarvE~vle~~~ 376 (477)
T KOG2467|consen 328 KNAKALASALISRGYKLVTG---GTDNHLVLVDLRPKGVDGARVEKVLELCH 376 (477)
T ss_pred HHHHHHHHHHHHcCceEecC---CccceEEEEeccccCCchHHHHHHHHHhh
Confidence 999999999987 8999863 55678899999853 235666666554
No 356
>PRK07324 transaminase; Validated
Probab=99.38 E-value=1.4e-10 Score=134.18 Aligned_cols=270 Identities=14% Similarity=0.095 Sum_probs=169.1
Q ss_pred HHHHHHHHHcC-CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001769 215 NFQTMIADLTG-LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1016)
Q Consensus 215 e~q~~iA~L~G-~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----- 288 (1016)
++++.||++++ .++.++.++.|++.++..++.++. ++||+|+++.-.|++....++ ..|.+++.++.
T Consensus 66 ~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~~~----~~g~~v~~v~~~~~~~ 138 (373)
T PRK07324 66 EFKEAVASLYQNVKPENILQTNGATGANFLVLYALV---EPGDHVISVYPTYQQLYDIPE----SLGAEVDYWQLKEENG 138 (373)
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC---CCCCEEEEcCCCchhHHHHHH----HcCCEEEEEecccccC
Confidence 57788999874 677889999999988877776663 379999999988988877654 35777777654
Q ss_pred -----hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccC---CCCCCc-ccceEEEe
Q 001769 289 -----KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTI---LKPPGE-LGADIVVG 354 (1016)
Q Consensus 289 -----~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~---l~~pg~-~GaDivvg 354 (1016)
+++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++.-...+.. ..+..+ ..-.|+++
T Consensus 139 ~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~ 218 (373)
T PRK07324 139 WLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTN 218 (373)
T ss_pred CCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEe
Confidence 23444 5678999999998 68998887 89999999999999999431111110 111111 12246677
Q ss_pred cC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 355 s~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
|. |.|+.| |--.|++.+++++++.+. +-+..+.+|++.. ...++.
T Consensus 219 s~SK~~~~~----G~RiG~i~~~~~li~~~~----------------------------~~~~~~~~~~~~~--~q~~a~ 264 (373)
T PRK07324 219 SMSKTYSLP----GIRVGWIAANEEVIDILR----------------------------KYRDYTMICAGVF--DDMLAS 264 (373)
T ss_pred cchhhcCCc----cceeEEEecCHHHHHHHH----------------------------HHhCcEEecCChH--HHHHHH
Confidence 76 877543 345689988777766551 0011112332221 112222
Q ss_pred HHHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC--CccEEEEecCC-HHHHHHHHH-HcCceeecc----cC
Q 001769 434 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD-AHAIASAAY-KIEMNLRVV----DS 504 (1016)
Q Consensus 434 y~~~~g-~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~--~~~~v~i~~~~-~~~v~~~L~-~~GI~~~~~----~~ 504 (1016)
++ +.. ..=+++..+...++.+.+.+.|++.+++....+. .+.-+.+..+. ..++.++|. ++||.+.+- .+
T Consensus 265 ~~-l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~ 343 (373)
T PRK07324 265 LA-LEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLE 343 (373)
T ss_pred HH-HcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCC
Confidence 11 111 1224455566667777888888877436554321 22122333332 678888875 679987553 25
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001769 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 505 ~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.+|+|+.. +++.+.+-++.|+
T Consensus 344 ~~iRis~~~--~~~~l~~~l~rl~ 365 (373)
T PRK07324 344 GHVRIGYCC--DTETLKKGLKKLS 365 (373)
T ss_pred CeEEEEecC--CHHHHHHHHHHHH
Confidence 789999874 5677766666664
No 357
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.38 E-value=4.4e-11 Score=140.14 Aligned_cols=222 Identities=17% Similarity=0.154 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~ 712 (1016)
...++++.|++++|.+. .+.+++|++++.+++.++. . . .+++.|+++...|+++...+.+.|.+++.++.
T Consensus 92 ~~~~Le~~la~~~g~~~-~i~~~sG~~a~~~~i~~l~---~-~--~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~--- 161 (410)
T PRK13392 92 PHVLLERELADLHGKES-ALLFTSGYVSNDAALSTLG---K-L--LPGCVILSDALNHASMIEGIRRSGAEKQVFRH--- 161 (410)
T ss_pred HHHHHHHHHHHHhCCCC-EEEECcHHHHHHHHHHHHh---c-C--CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---
Confidence 34589999999999764 5777888876655444321 1 0 24577888777898876677788999887754
Q ss_pred CCCCHHHHHHHHHcC-CCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcC------CCC-ccC
Q 001769 713 GNINIEELRKAAEAN-RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YIG 783 (1016)
Q Consensus 713 g~iD~~~L~~~i~~~-~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~------~pg-~~G 783 (1016)
.|.+++++.++.. .++|++|++++|+ .+|.+. |+++|.++|+++|+++++|.++..+..+.. .++ ...
T Consensus 162 --~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~ 238 (410)
T PRK13392 162 --NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA-PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDR 238 (410)
T ss_pred --CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCC
Confidence 3677777777532 2578999999995 679887 899999999999999999998863332110 011 124
Q ss_pred CcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHh
Q 001769 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1016)
Q Consensus 784 aDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~l 863 (1016)
+|+++.+++|+|+++ | |++++++++.+.+.... .. ...+.+. +...+..+.+.|..+
T Consensus 239 ~div~~tlsK~~g~~------G-G~~~~~~~~~~~l~~~~-----------~~-~~~s~~~----~~~~~~a~~aaL~~~ 295 (410)
T PRK13392 239 IDMIQGTLAKAFGCL------G-GYIAASADLIDFVRSFA-----------PG-FIFTTAL----PPAVAAGATAAIRHL 295 (410)
T ss_pred CcEEEEEChHhhhcc------c-chhhcCHHHHHHHHHhC-----------cc-hhccCcC----CHHHHHHHHHHHHHH
Confidence 689989999999643 3 67777766555321100 00 0000011 112233344455544
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 864 GSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 864 G~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
-..+ ...++...+.+++.+.|++ ++++
T Consensus 296 ~~~~--~~~~~~~~~~~~l~~~L~~~g~~~ 323 (410)
T PRK13392 296 KTSQ--TERDAHQDRVAALKAKLNANGIPV 323 (410)
T ss_pred hcCH--HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3322 3346678888999999987 4554
No 358
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.37 E-value=3e-11 Score=139.78 Aligned_cols=239 Identities=17% Similarity=0.182 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCcc-ccHHHHHhCCcEEEEEcCC--
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPATAAMCGMKIVSVGTD-- 710 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg-~~~~~a~~~G~~vv~v~~d-- 710 (1016)
+.+|++.+++++|++.+ +.+++|+.|+.. +. .. +.+++++| |...|. +..+.....|...+.++.+
T Consensus 73 ~~~lE~~va~~~G~~~a-v~v~sGT~Al~l-l~---~l----~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea 141 (450)
T TIGR02618 73 FYHLERTVRELYGFKYV-VPTHQGRGAENL-LS---QI----AIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEA 141 (450)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHH-HH---Hh----CCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccc
Confidence 45889999999999974 667888877632 21 11 22456765 555553 3333356788866666443
Q ss_pred --------CCCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-CC-cccc--ccHHHHHHHHHHcCcEEEEEccccccccCcC
Q 001769 711 --------AKGNINIEELRKAAEANR-DNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1016)
Q Consensus 711 --------~~g~iD~~~L~~~i~~~~-~~t~~v~i~~Pn-~~-G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~l~ 777 (1016)
.+|.+|+++|+++|+.+. +++++|.++.++ .. |... .|+++|.++|+++|+.+|.|||+.+.-..+.
T Consensus 142 ~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 142 HDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhh
Confidence 358999999999998421 256677777764 34 5552 3799999999999999999999865222111
Q ss_pred ---CCC-------------ccCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCC
Q 001769 778 ---SPG-------------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1016)
Q Consensus 778 ---~pg-------------~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g 840 (1016)
.++ --.+|.+++|+||.++.|. +|++++++ ++..++....+ ..+
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~------GG~l~~~d~~l~~k~r~~~~-------------~~e 282 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI------GGFLCMNDDEMFQSAKELVV-------------VFE 282 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC------ceEEEeCCHHHHHHHHHHhh-------------hcC
Confidence 111 1258999999999986554 46788664 44443321110 001
Q ss_pred CccCCccchhhHHHHHHHH-HHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEec
Q 001769 841 TIAAAPWGSALILPISYTY-IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLR 910 (1016)
Q Consensus 841 ~i~s~~~G~a~~~~~a~a~-l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~ 910 (1016)
...+ ..|-+..-..|.++ |..+-. +...++.+.+++||+++|.+ +.+|..|. -.|-+.++.+
T Consensus 283 G~~t-yGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p~----ggh~V~vda~ 346 (450)
T TIGR02618 283 GMPS-YGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEPV----GGHAVFLDAR 346 (450)
T ss_pred Cccc-cCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCCC----CcceEEEEhH
Confidence 1111 11111111111121 222111 13456677789999999987 67776542 2255556543
No 359
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.37 E-value=1.1e-10 Score=136.99 Aligned_cols=278 Identities=14% Similarity=0.144 Sum_probs=170.5
Q ss_pred CHHHHHHHHHH-HhccccCCCccccccccccCCCChhhhhcc-c----ccccccccCCCCCchhhhhHHHHHHHHHHHHH
Q 001769 569 TEHELLRYIHL-LQSKELSLCHSMIPLGSCTMKLNATTEMMP-V----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLC 642 (1016)
Q Consensus 569 sE~e~~r~l~~-l~~~n~~~~~~~i~LGs~t~~~~~~~~~~~-~----~~~~f~~~~P~~p~e~~qG~~e~~~el~~~la 642 (1016)
+..+.++...+ +..++- ...++.|+++.+.+.+...... + ..... +-| | + +|..++...+.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~--~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~---~~Y-~-~--~G~~~lr~aia~~~~ 95 (410)
T PRK06290 25 YKFEKIKRAKRAAKEKHP--DMELIDMGVGEPDEMADESVVEVLCEEAKKPEN---RGY-A-D--NGIQEFKEAAARYME 95 (410)
T ss_pred hHHHHHHHHHHHHhhhcC--CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCC---CCC-C-C--CCcHHHHHHHHHHHH
Confidence 34455554443 433332 2246789988877654332211 1 11111 112 2 1 577777777777777
Q ss_pred HHhCCC---ce-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCC
Q 001769 643 TITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNIN 716 (1016)
Q Consensus 643 eL~G~~---~~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD 716 (1016)
+..|.+ .. .+..++|++. +..++++.+. .+++.|+++.+.+..+...++..|.+++.++++++ +.+|
T Consensus 96 ~~~g~~~~~~~~~I~it~Gs~~--al~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d 168 (410)
T PRK06290 96 KVFGVKDIDPVTEVIHSIGSKP--ALAMLPSCFI-----NPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPD 168 (410)
T ss_pred HHcCCCcCCCcceEEEccCHHH--HHHHHHHHhC-----CCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCC
Confidence 766754 33 5767777652 2233333321 36789999999887777888899999999999864 4679
Q ss_pred HHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cCcC-C----CCccCCcEE
Q 001769 717 IEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-S----PGYIGADVC 787 (1016)
Q Consensus 717 ~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~l~-~----pg~~GaDi~ 787 (1016)
++++++++. +++++|++++|| .+|.+. ..+++|.++|+++|+++++|.+..... .+.. . +...+.+|+
T Consensus 169 ~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~ 245 (410)
T PRK06290 169 LDSIPKDIK---EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVE 245 (410)
T ss_pred HHHHHHhhc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEE
Confidence 999999987 689999999995 688887 237888999999999999997753111 1100 0 112235688
Q ss_pred EeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhh
Q 001769 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1016)
Q Consensus 788 ~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eG 867 (1016)
+.|+.|.|++| |..+|++++++++...+... .....++. +......+..+|.. + +=
T Consensus 246 i~SfSK~~g~~----GlRiG~ii~~~~l~~~l~~~--------------~~~~~~~~----~~~~q~aa~~~l~~-~-~~ 301 (410)
T PRK06290 246 IHSLSKAYNMT----GWRLAFVVGNELIVKAFATV--------------KDNNDSGQ----FIAIQKAGIYALDH-P-EI 301 (410)
T ss_pred EeechhhcCCc----hhheEeEEeCHHHHHHHHHH--------------HhccccCC----cHHHHHHHHHHhhC-c-HH
Confidence 99999999654 56799999887665443110 00011111 01111222333332 2 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001769 868 LTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 868 l~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+++..++..++.+++.+.|++.
T Consensus 302 ~~~~~~~~~~~~~~l~~~L~~~ 323 (410)
T PRK06290 302 TEKIREKYSRRLDKLVKILNEV 323 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 4555666677888898999873
No 360
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.37 E-value=7.7e-11 Score=136.83 Aligned_cols=263 Identities=15% Similarity=0.168 Sum_probs=160.6
Q ss_pred ccccccccCCCChhhhhccccccc--ccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHHHHHHHH
Q 001769 591 MIPLGSCTMKLNATTEMMPVTWPS--FANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGL 665 (1016)
Q Consensus 591 ~i~LGs~t~~~~~~~~~~~~~~~~--f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~ae~a~l 665 (1016)
++.|+.+.+.+++........... ....+.|.+ .+|..++...+.+++.+.+|.+ .. .+..++|++. +..
T Consensus 33 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~--~i~ 107 (385)
T PRK09276 33 VISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS---YEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE--GIA 107 (385)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH--HHH
Confidence 567888777665432221110000 011223333 4676677777777777766753 32 3666566542 223
Q ss_pred HHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 666 MVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 666 ~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
++++.+. ++++.|+++++.+..+...++..|.+++.++.+.+ ..+|++++++++. +++++|++++|+ .+
T Consensus 108 ~~~~~~~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NPt 179 (385)
T PRK09276 108 HIPLAFV-----NPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNPT 179 (385)
T ss_pred HHHHHhC-----CCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCC
Confidence 3344331 35789999999887777778899999999998743 4589999999887 789999999985 68
Q ss_pred ccccc--cHHHHHHHHHHcCcEEEEEccccccc-cCcC--C----CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcc
Q 001769 743 GVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGLT--S----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1016)
Q Consensus 743 G~i~~--di~~I~~ia~~~g~lv~vDga~~~a~-~~l~--~----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~ 813 (1016)
|.+.+ ++++|+++|+++|+++++|.+...-. .+.. . +...+-.+++.|+.|.|+.| |..+|++++++
T Consensus 180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~i~~~ 255 (385)
T PRK09276 180 GAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMT----GWRIGFAVGNA 255 (385)
T ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCc----chhheeeeCCH
Confidence 88872 36899999999999999998753111 1110 1 11123357788999998544 45699999887
Q ss_pred cccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 814 HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 814 ~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
++.+.+... . .... .+. +......+..+|.. ..+-+++..+....+.+++.+.|++.
T Consensus 256 ~l~~~~~~~------------~-~~~~-~~~----~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 256 DLIAGLGKV------------K-SNVD-SGV----FQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL 312 (385)
T ss_pred HHHHHHHHH------------H-hhcc-CCC----CHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 765543110 0 0000 010 11122222333321 23445666666777788899999873
No 361
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.37 E-value=4.9e-11 Score=138.14 Aligned_cols=227 Identities=15% Similarity=0.147 Sum_probs=147.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~ 706 (1016)
.+|..++..++++++++++|.+. .+..++|+++.++ +++.+. ++++.|++++..|+++...+.+.|.+++.
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~-~i~~~sG~~a~~~---a~~~~~-----~~gd~vi~~~~~~~~~~~~~~~~g~~~~~ 143 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEA-ALVFQSGFNTNQG---VLSALL-----RKGDIVLSDELNHASIIDGLRLTKATKKI 143 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEE
Confidence 56777888999999999999765 4667788765543 333321 35678999998888877667788888877
Q ss_pred EcCCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCc-C------
Q 001769 707 VGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-T------ 777 (1016)
Q Consensus 707 v~~d~~g~iD~~~L~~~i~~~~-~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~------ 777 (1016)
++ .+|++++++.+++.. +++++|+++++ |.+|.+. |+++|+++|+++|+++++|.++.....+. .
T Consensus 144 ~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 144 YK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred eC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 65 379999999887432 36888888775 5679887 89999999999999999999874321110 0
Q ss_pred CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHH
Q 001769 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1016)
Q Consensus 778 ~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~ 857 (1016)
...+.+.|+++.+++|+|+. +| |+++.++++.+.+.... .....+.. . +...+..+.
T Consensus 218 ~~~~~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~~-~----~~~~~~a~~ 274 (385)
T TIGR01825 218 FGLEDKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNRA-----------RPFLFSTA-Q----PPAVVAALA 274 (385)
T ss_pred cCCCcCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHhC-----------ccccccCC-C----CHHHHHHHH
Confidence 01124678889999999953 22 67777766554431100 00001110 1 112222333
Q ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
+.+..+-.. .+..++...+.+++.+.|++ ++++.
T Consensus 275 ~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~ 309 (385)
T TIGR01825 275 AAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTG 309 (385)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 444433221 23455667788999999987 45543
No 362
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.37 E-value=8.8e-11 Score=135.64 Aligned_cols=296 Identities=14% Similarity=0.103 Sum_probs=185.8
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhcc
Q 001769 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~ 250 (1016)
++.|-.|...|+.+.+.+.+...-...| | ..|. .++++.+|+++|.++.++.+..|++.++..++.++.
T Consensus 34 l~~nen~~~~~~~v~~a~~~~~~~~~~Y-p-----~~g~----~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~- 102 (366)
T PRK01533 34 LASNENPFGCSPRVLDELQKSWLDHALY-P-----DGGA----TTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVL- 102 (366)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHhcCcC-C-----CCCH----HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc-
Confidence 4666667667777765665421101122 2 1232 346789999999999999999999988777766653
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001769 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1016)
Q Consensus 251 ~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~l 321 (1016)
++||+|+++.-.++.+...++ ..|++++.++. +++++ +++++++|++.+| |.+|.+.+.+++.++
T Consensus 103 --~~gd~vlv~~P~y~~~~~~~~----~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l 176 (366)
T PRK01533 103 --KAGDNIVTAGATFPQYRHHAI----IEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQF 176 (366)
T ss_pred --CCCCEEEEcCCcHHHHHHHHH----HcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHH
Confidence 378999999988888877654 45888877654 34555 6678899999998 689999886666555
Q ss_pred HH---hCCcEEEEEeccccccC-------CCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEee
Q 001769 322 AH---ANGVKVVMATDLLALTI-------LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1016)
Q Consensus 322 ah---~~GalviV~a~~~alg~-------l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~ 390 (1016)
++ +++ +++++.....+.. +......+--|++.|. |.||.| |=-.||+.+.+++++.+-
T Consensus 177 ~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~i~~~~~~~~l~------ 245 (366)
T PRK01533 177 IEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLA----SFRVGYAVGHEELIEKLN------ 245 (366)
T ss_pred HHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcCh----HHHHhHHhCCHHHHHHHH------
Confidence 54 444 6666422111110 0000112234777886 888644 223578777766665541
Q ss_pred eecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc
Q 001769 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1016)
Q Consensus 391 s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~ 470 (1016)
+-+.+ .|.+.. +..++.. .+-..+-++++.+...+..+++.+.|+.+| +++.
T Consensus 246 ----------------------~~~~~--~~~~~~--~q~aa~~-~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~ 297 (366)
T PRK01533 246 ----------------------VVRLP--FNVSSL--AQKAATI-AFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFY 297 (366)
T ss_pred ----------------------HhcCC--CCcCHH--HHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccC
Confidence 00011 111111 2222221 111222345566666677778888888887 7765
Q ss_pred CC-CCccEEEEecCCHHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 471 GL-PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 471 ~~-~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+ ..| +.+.++++.++.+.|.++||.++.. ++.+||++. +.+|.++|+++|.
T Consensus 298 ~~~~nf--~~~~~~~~~~~~~~l~~~GI~Vr~~-~~~iRis~~---~~~~~~~l~~al~ 350 (366)
T PRK01533 298 QSQTNF--IFLPVENGGEIYEACAHAGFIIRPF-PNGVRITVG---TREQNEGVISVLQ 350 (366)
T ss_pred CCcCcE--EEEeCCCHHHHHHHHHHCCcEEccC-CCceEEeCC---CHHHHHHHHHHHH
Confidence 32 222 3345545778999999999999875 678999977 7899999999985
No 363
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.37 E-value=1.2e-11 Score=142.28 Aligned_cols=224 Identities=8% Similarity=-0.014 Sum_probs=142.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCc---eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-Cccc-cHHHHHhCCcE
Q 001769 629 GYQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGT-NPATAAMCGMK 703 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~---~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~s-aHg~-~~~~a~~~G~~ 703 (1016)
-+.+++.++++.+++++|.+. +-+..++|+.+.+++++.+- .+++++++..+ ..|- ....++.+|..
T Consensus 45 ~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~--------~~g~~~l~i~~G~fg~r~~~~a~~~g~~ 116 (360)
T PRK05355 45 EFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL--------GGGKKADYVDTGSWSKKAIKEAKKYGEV 116 (360)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCCc
Confidence 345788899999999999742 34556677767766655432 12344444322 1221 12346678865
Q ss_pred EEEEcCCC-CCCCCHHHHHH-HHHcCCCCEEEEEEEc-CCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCC
Q 001769 704 IVSVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTY-PSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1016)
Q Consensus 704 vv~v~~d~-~g~iD~~~L~~-~i~~~~~~t~~v~i~~-Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg 780 (1016)
+.+..++ .|..+..++++ +++ +++++|.+++ .+++|+..+||++| +|++++||+++.++...+ ...
T Consensus 117 -~~~~~~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i-dv~ 185 (360)
T PRK05355 117 -NVAASSEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPI-DVS 185 (360)
T ss_pred -eEEecccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccC-CHH
Confidence 6666654 67777666666 676 5788888887 46799996467766 899999999986554332 233
Q ss_pred ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCC---CCCCcCCCCCCccCCccchhhHHHHHH
Q 001769 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISY 857 (1016)
Q Consensus 781 ~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~---~~re~~~~~g~i~s~~~G~a~~~~~a~ 857 (1016)
+ .|++++|+||+|+ .||+|++++++++.+.+.... +..-.+ ........|.++. ....+ .
T Consensus 186 ~--~d~~~~ssqK~lg------P~Glg~l~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~Tp~~~-----~i~aL---~ 248 (360)
T PRK05355 186 K--FGLIYAGAQKNIG------PAGLTIVIVREDLLGRALPSI-PSMLDYKTHADNDSMYNTPPTF-----AIYLA---G 248 (360)
T ss_pred H--ccEEEEecccccc------CCceEEEEECHHHHhhcccCC-ChHHHHHHHHhcCCccCCCcHH-----HHHHH---H
Confidence 3 4699999999884 468999999998776654321 100000 0000001222222 11223 3
Q ss_pred HHHHHhChh-hHHHHHHHHHHHHHHHHHHHhc
Q 001769 858 TYIAMMGSK-GLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 858 a~l~~lG~e-Gl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+.|.++-.+ |+..+.+++..+++++.++|++
T Consensus 249 ~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~ 280 (360)
T PRK05355 249 LVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS 280 (360)
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 445555456 7999999999999999999997
No 364
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.37 E-value=4.6e-11 Score=139.44 Aligned_cols=246 Identities=16% Similarity=0.150 Sum_probs=158.4
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..||++.+.+..+...+......+... +. .+...++++.|+++++.+ ..++.+||++++++++.++|.|
T Consensus 47 ~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~--------~~~~~~la~~L~~~~~~~-~~~f~~SGseA~e~Alk~ar~~ 115 (397)
T TIGR03246 47 NALGHAHPELVKALIEQADKLWHIGNG--YT--------NEPVLRLAKKLVDATFAD-KVFFCNSGAEANEAALKLARRY 115 (397)
T ss_pred ccCCCCCHHHHHHHHHHHHhcccccCc--cC--------CHHHHHHHHHHHhhCCCC-EEEEeCCcHHHHHHHHHHHHHH
Confidence 467877666655554443221111110 11 123457889999998765 4577899999999999999988
Q ss_pred HHhcCCCCCCEEE-EcCCCccccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001769 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1016)
Q Consensus 672 ~~~~g~~~~~~Vl-v~~saHg~~~~~a~~~G~------------~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~ 738 (1016)
...++..+|++|+ ...+.||.........|. .+..++. .|+++++++++ +++++|+++.
T Consensus 116 ~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~---~~~aavi~Ep 187 (397)
T TIGR03246 116 ALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALIS---DKTCAVIVEP 187 (397)
T ss_pred HHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhc---cCeEEEEEec
Confidence 6543222344554 466889987655443321 2344444 48999999997 7899999996
Q ss_pred CC-CCcccc---ccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc--------cCCcEEEeCccccccCCCCCCCCeE
Q 001769 739 PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGM 806 (1016)
Q Consensus 739 Pn-~~G~i~---~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~--------~GaDi~~~s~hK~~~~phg~GGPg~ 806 (1016)
++ +.|++. ..+++|.++|+++|+++++|.+++ ++ .+.|. ..+|++++ .|.++ ||.-+
T Consensus 188 i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~---Gr~G~~~a~~~~gv~pDi~t~--~K~lg-----gG~pi 256 (397)
T TIGR03246 188 IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GV---GRTGELYAYMHYGVTPDILTS--AKALG-----GGFPI 256 (397)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC---CccccchhhhhcCCCCCEEEe--ehhhh-----CCcce
Confidence 54 456552 369999999999999999998763 22 22222 23677754 57763 34457
Q ss_pred EEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 001769 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1016)
Q Consensus 807 G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L 886 (1016)
|.+++++++.+.+.... ..+++.|++..++++.+.|..+..+. +.++..++.+++.++|
T Consensus 257 gav~~~~~i~~~~~~~~------------------~~~t~~~~p~~~aaa~a~l~~~~~~~---l~~~~~~~~~~l~~~L 315 (397)
T TIGR03246 257 GAMLTTTEIAAHLKVGT------------------HGTTYGGNPLACAVAGKVLDLVNTPE---LLAGVKQRHDLFVDGL 315 (397)
T ss_pred eEEEEcHHHHHhccCCC------------------cCCCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHH
Confidence 88888887765542100 01123345666777778888775443 4567778889999999
Q ss_pred hc
Q 001769 887 EK 888 (1016)
Q Consensus 887 ~~ 888 (1016)
++
T Consensus 316 ~~ 317 (397)
T TIGR03246 316 EK 317 (397)
T ss_pred HH
Confidence 76
No 365
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.37 E-value=2.3e-12 Score=143.43 Aligned_cols=231 Identities=21% Similarity=0.215 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc---cHHHHHhCCcEEEEEc
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT---NPATAAMCGMKIVSVG 708 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~---~~~~a~~~G~~vv~v~ 708 (1016)
....++++.+++++|.+.+. +..+|+.++..+ ++.+. . ++..||+.+++|-. ..+...+.|.+++.++
T Consensus 29 ~~~~~l~~~i~~l~g~e~a~-f~~sGT~An~~a---l~~~~-~----~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~ 99 (290)
T PF01212_consen 29 PTTARLEERIAELFGKEAAL-FVPSGTMANQLA---LRAHL-R----PGESVICADTAHIHFDETGAIEELSGAKLIPLP 99 (290)
T ss_dssp HHHHHHHHHHHHHHTSSEEE-EESSHHHHHHHH---HHHHH-H----TTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEB
T ss_pred hhHHHHHHHHHHHcCCCEEE-EeCCCChHHHHH---HHHHH-h----cCCceeccccceeeeeccchhhHhcCcEEEECC
Confidence 35568999999999999774 455787777444 44332 1 45689998888853 3345578999999999
Q ss_pred CCCCCCCCHHHHHHHHHc---CCCCEEEEEEEcCCCC--cccc--ccHHHHHHHHHHcCcEEEEEccccc-cccCc-CCC
Q 001769 709 TDAKGNINIEELRKAAEA---NRDNLSTLMVTYPSTH--GVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL-TSP 779 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~---~~~~t~~v~i~~Pn~~--G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~l-~~p 779 (1016)
.+++|.+|+++|++.++. |..++++|++++|+.. |.+. .+|++|+++||++|+.+|+|||-++ +...+ ..+
T Consensus 100 ~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~ 179 (290)
T PF01212_consen 100 SDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSL 179 (290)
T ss_dssp ECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHH
T ss_pred CcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccH
Confidence 866699999999999986 4468999999999876 7655 4789999999999999999998531 11111 111
Q ss_pred --CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHH
Q 001769 780 --GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1016)
Q Consensus 780 --g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~ 857 (1016)
...++|++.++++|.+ |.|+.++++.+++++..... . +.+.-|... +.+.+....
T Consensus 180 ~e~~~~~D~v~~~~tK~~------g~~~Gavl~~~~~~i~~~~~-~-----------~k~~gg~~~-----~~G~~~a~~ 236 (290)
T PF01212_consen 180 AEIAAGADSVSFGGTKNG------GAPGGAVLAGNKEFIAKARR-Q-----------RKRLGGGMR-----QAGVLAAAE 236 (290)
T ss_dssp HHHHTTSSEEEEETTSTT-------SSSEEEEEESHHHHHHHHH-H-----------HHHHTHHHH-----HTTHHHHHH
T ss_pred HHHhhhCCEEEEEEEccc------ccccceEEEechHHHHHHHH-H-----------HHHhccCee-----ecceeeeec
Confidence 2357999999999976 45667899999874432110 0 000001111 111222212
Q ss_pred HHH--HHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccc
Q 001769 858 TYI--AMMGSKGLTEASKIAILNANYMAKRLEK-HYPILF 894 (1016)
Q Consensus 858 a~l--~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y 894 (1016)
.|+ ...+.+.-...+.+..++|++|++.|+. ++.+.+
T Consensus 237 ~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~~~~~ 276 (290)
T PF01212_consen 237 LYQFAALRALELWLERARHANAMAKRLAAGLEALGGVLPR 276 (290)
T ss_dssp HHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEECEEEET
T ss_pred hhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 221 1112222245678888899999999987 344443
No 366
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=1.4e-11 Score=135.80 Aligned_cols=315 Identities=14% Similarity=0.132 Sum_probs=204.7
Q ss_pred ccccccCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHH
Q 001769 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1016)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~ 245 (1016)
...||+|.+-..+....++. .+.+.+ .-+.+| +=+=|+...++.+++.||.++|.+. +.+|+-+-++++..+
T Consensus 100 aS~NfL~l~~~~~ike~a~~--~lrkyG-vGsCGP---rGFYGt~DvHldlE~~iakF~G~E~--aivYs~gF~ti~S~i 171 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASF--TLRKYG-VGSCGP---RGFYGTIDVHLDLEKRIAKFMGTED--AIVYSYGFSTIESAI 171 (467)
T ss_pred cchhhhhhcccHHHHHHHHH--HHHHhC-CCCcCC---CcccccceeecccHHHHHHhhCCcc--eeeeccccchhhhcc
Confidence 45689999977666666664 333333 122333 4466899999999999999999998 778888877777777
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-cCC------------CEeEEEEEcC--CCCe
Q 001769 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG------------DVCGVLVQYP--GTEG 310 (1016)
Q Consensus 246 ~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~-l~~------------~t~~V~v~~p--n~~G 310 (1016)
-|+. ++||-|++++.++-.+..+++. .+.....+.+.|++++++ +.+ .|+-.+|... -.+|
T Consensus 172 pafs---KrGDIi~~de~~nfaIq~Glql-SRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g 247 (467)
T KOG1358|consen 172 PAFS---KRGDIIFVDEAVNFAIQKGLQL-SRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTG 247 (467)
T ss_pred hhhh---ccCcEEEEehhhhHHHHHHHhh-hhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCC
Confidence 6664 2799999999999999998864 345567777788888765 211 2344444432 5689
Q ss_pred eeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCc-----cc-----ceEEEecC-ccccccCCCCCcceEEEEeehhh
Q 001769 311 EVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGE-----LG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEY 379 (1016)
Q Consensus 311 ~i~dl~eI~~lah~~GalviV~a~~~alg~l~~pg~-----~G-----aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l 379 (1016)
.+.|+++|+++..++...+++ +..+++|++..-|. +| +|+++++. ..++ +|| ||.+.+.
T Consensus 248 ~i~pl~~iv~lk~Kyk~Rvil-dEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala----s~G---gFc~G~~-- 317 (467)
T KOG1358|consen 248 DICPLPEIVKLKNKYKFRVIL-DESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA----SGG---GFCAGKS-- 317 (467)
T ss_pred cccccHHHHHHHhhheEEEEE-ecccccccccccCccccccCCCCccceeeeeeccccccc----ccC---ceeecce--
Confidence 999999999999999999999 56788888865432 23 68999988 5554 343 5554321
Q ss_pred hhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001769 380 KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 459 (1016)
Q Consensus 380 ~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~ 459 (1016)
|....| |-.|.+.+++++.++.++.+.+.+..-.+--.++.+.+......+..
T Consensus 318 --------------------~i~~hQ-------rLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~ 370 (467)
T KOG1358|consen 318 --------------------FIADHQ-------RLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHA 370 (467)
T ss_pred --------------------eeEeee-------eccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccch
Confidence 222222 33444555555444444333332111111112245555666677777
Q ss_pred HHhcCCCeEEcCCCCccEEEEecCC-----------HHHHHHHHHHcCceee---c------c-cCCeEEEEeccCCCHH
Q 001769 460 GLKKLGTVEVQGLPFFDTVKVKCAD-----------AHAIASAAYKIEMNLR---V------V-DSNTVTASFDETTTLE 518 (1016)
Q Consensus 460 ~L~~~G~~~l~~~~~~~~v~i~~~~-----------~~~v~~~L~~~GI~~~---~------~-~~~~lris~te~~t~e 518 (1016)
.|+...++.+.+.+..+.+.+.... .+++++....+|+.+- . . .+..+|||+...++++
T Consensus 371 ~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~see 450 (467)
T KOG1358|consen 371 ALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEE 450 (467)
T ss_pred hhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHH
Confidence 8877633777765433333333221 3456666555577541 1 1 2467999999999999
Q ss_pred HHHHHHHHHhC
Q 001769 519 DVDKLFIVFAG 529 (1016)
Q Consensus 519 did~ll~aL~~ 529 (1016)
|++++.+.++.
T Consensus 451 el~ra~~~ik~ 461 (467)
T KOG1358|consen 451 ELERAAELIKE 461 (467)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 367
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.37 E-value=2.2e-10 Score=131.54 Aligned_cols=299 Identities=14% Similarity=0.153 Sum_probs=188.4
Q ss_pred cCCCCCCCCChHHHHHHHHhCC--CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCc-cEEEccchHHHHHHHHHH
Q 001769 171 IGMGYYNTHVPPVILRNIMENP--AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMC 247 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~--~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~a-nasl~~~~Taa~eA~~~a 247 (1016)
++.|.-+...|+.+.+.+.+.- .-...|.+ +| ..++++.+|+++|.+.. ++.+.+|++.+...+..+
T Consensus 31 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~----~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~ 100 (356)
T PRK04870 31 LDAMENPYRLPAELRAELGERLAEVALNRYPD------PR----AAALKAALRAAMGVPAGADVLLGNGSDELIQLLALA 100 (356)
T ss_pred CcCCCCCCCCCHHHHHHHHHHhhccccccCCC------CC----HHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHH
Confidence 4566556667777766665421 11234443 12 24577899999998754 787888887776665555
Q ss_pred hccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch--------hhhc-c-CCCEeEEEEEcC-CCCeeeccHH
Q 001769 248 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-K-SGDVCGVLVQYP-GTEGEVLDYG 316 (1016)
Q Consensus 248 ~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--------~L~~-l-~~~t~~V~v~~p-n~~G~i~dl~ 316 (1016)
+. ++||+|+++.-.|+.+...+ +..|++++.++.+ ++++ + ..++++|++.+| |.+|.+.+.+
T Consensus 101 ~~---~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~ 173 (356)
T PRK04870 101 CA---KPGATVLAPEPGFVMYRMSA----KLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDA 173 (356)
T ss_pred hc---CCCCEEEECCCCHHHHHHHH----HHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHH
Confidence 42 37999999998888776654 3468888887653 3444 4 347899999988 6899999988
Q ss_pred HHHHHHHhCCcEEEEEeccccccC---CCCCCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 317 DFIKNAHANGVKVVMATDLLALTI---LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 317 eI~~lah~~GalviV~a~~~alg~---l~~pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
++.++++..+.+++++.....+.. ........--+++.|. | ++.| |.-.||+++++++++.+-..
T Consensus 174 ~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~----GlRiG~~i~~~~~i~~~~~~------ 242 (356)
T PRK04870 174 DVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLA----GLRLGYLAGHPAWIAELDKV------ 242 (356)
T ss_pred HHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhH----HHhhhhhhCCHHHHHHHHHc------
Confidence 888888877888887432222221 1111122223566666 6 7543 33468888877776554110
Q ss_pred cCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC
Q 001769 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL 472 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~ 472 (1016)
+...++ ..+ +..++.++ +...+-+++..++..++.+++.+.|++++|+.+...
T Consensus 243 ----------------------~~~~~~---~~~-~q~~a~~~-l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 295 (356)
T PRK04870 243 ----------------------RPPYNV---NVL-TQATALFA-LEHVDVLDAQAAQLRAERTRLAAALAALPGVTVFPS 295 (356)
T ss_pred ----------------------cCCCcC---CHH-HHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence 000111 111 11222211 111233677778888899999999998833766432
Q ss_pred CCccEEEEecCCHHHHHHHHHHcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 473 PFFDTVKVKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 473 ~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.. .-+.+..+...++.+.|.++||.++.. .++.+|+++. +.++.++|+++|.
T Consensus 296 ~~-~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~ 353 (356)
T PRK04870 296 AA-NFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALK 353 (356)
T ss_pred CC-eEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHH
Confidence 11 124445555678889999999988542 1468999988 7899999999985
No 368
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=3.5e-10 Score=131.28 Aligned_cols=263 Identities=16% Similarity=0.150 Sum_probs=173.7
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc------
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL------ 288 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~------ 288 (1016)
++++.+|+++|.++.++.+++|++.++..++.++. .+||+|++++-.++.+...++ ..|++++.++.
T Consensus 90 ~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~---~~gd~Vlv~~P~y~~y~~~~~----~~g~~~~~v~~~~~~~~ 162 (380)
T PLN03026 90 RLRAALAEDSGLESENILVGCGADELIDLLMRCVL---DPGDKIIDCPPTFGMYVFDAA----VNGAEVIKVPRTPDFSL 162 (380)
T ss_pred HHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhc---CCCCEEEEcCCChHHHHHHHH----HcCCEEEEeecCCCCCc
Confidence 57789999999998899999999988776665542 278999999988876665543 45888877654
Q ss_pred --hhhhc-c-CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecccc-ccCCCC----CCcccceEEEecC-c
Q 001769 289 --KDIDY-K-SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLA-LTILKP----PGELGADIVVGSA-Q 357 (1016)
Q Consensus 289 --~~L~~-l-~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~a-lg~l~~----pg~~GaDivvgs~-k 357 (1016)
+++++ + ++++++|++.+| |.+|.+.|.+++.++++.. +++++| +... +..... .....-.|++.|. |
T Consensus 163 d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~D-eaY~~~~~~~~~~~~~~~~~~viv~~SfSK 240 (380)
T PLN03026 163 DVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLD-EAYIEFSTQESRMKWVKKYDNLIVLRTFSK 240 (380)
T ss_pred CHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEE-CcchhhcCCcchHHHHHhCCCEEEEecchH
Confidence 33444 5 578999999998 6899999999999999865 677773 3321 110000 1122345788887 8
Q ss_pred cccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~ 437 (1016)
.||.| |=-.||+...+++++.+- +.+...++.+ ....+..+++
T Consensus 241 ~~gla----GlRiGy~~~~~~~i~~l~----------------------------~~~~~~~~~~-~~q~aa~~aL---- 283 (380)
T PLN03026 241 RAGLA----GLRVGYGAFPLSIIEYLW----------------------------RAKQPYNVSV-AAEVAACAAL---- 283 (380)
T ss_pred hhcCc----cccceeeecCHHHHHHHH----------------------------HhcCCCCCCH-HHHHHHHHHh----
Confidence 88643 223688888777765541 0000111211 1111222221
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecC---CHHHHHHHHHHcCceeeccc----CCeEEE
Q 001769 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA---DAHAIASAAYKIEMNLRVVD----SNTVTA 509 (1016)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~---~~~~v~~~L~~~GI~~~~~~----~~~lri 509 (1016)
...+=+++..+++.+..+++.+.|+++|++.+... ..| +.+..+ ...++.+.|.++||.++... ++.+||
T Consensus 284 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f--~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRi 361 (380)
T PLN03026 284 SNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANF--ILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRV 361 (380)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeE--EEEECCCCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEE
Confidence 11222566777778888899999998864554322 222 334444 27889999999999886542 468999
Q ss_pred EeccCCCHHHHHHHHHHHh
Q 001769 510 SFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 510 s~te~~t~edid~ll~aL~ 528 (1016)
|+. +.++.++|+++|.
T Consensus 362 s~~---~~~~~~~l~~al~ 377 (380)
T PLN03026 362 SVG---KPEHTDALMEALK 377 (380)
T ss_pred ecC---CHHHHHHHHHHHH
Confidence 988 7889999999885
No 369
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.36 E-value=1e-11 Score=142.56 Aligned_cols=169 Identities=18% Similarity=0.202 Sum_probs=121.2
Q ss_pred HHHHHHHHHHhCCCceeeec-CChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~-~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g 713 (1016)
.++++.+++++|++...+.. ++|+++ +..++++.+. +++++|++++..+..+...++..|++++.++.+.++
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~--~i~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDE--VIDTLMRTFI-----DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 47888899999987655555 566543 2233333321 256789999876666666678899999999987777
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCC--ccCCcEEEeC
Q 001769 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--YIGADVCHLN 790 (1016)
Q Consensus 714 ~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg--~~GaDi~~~s 790 (1016)
.+|+++++++++ +++++|++++|+ .+|.+. +++++.++|+++|+++++|.++..-...-..+. ...--+++.|
T Consensus 145 ~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 145 SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLI-PEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEe
Confidence 899999999997 678899999985 689997 899999999999999999988742111100110 1111256679
Q ss_pred ccccccCCCCCCCCeEEEEEEccccccc
Q 001769 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPF 818 (1016)
Q Consensus 791 ~hK~~~~phg~GGPg~G~i~~~~~l~~~ 818 (1016)
++|.|++| |.++|++.+++++...
T Consensus 221 ~SK~~g~~----GlRiG~~~~~~~~~~~ 244 (361)
T PRK00950 221 FSKVFGLA----GLRIGYGFVPEWLIDY 244 (361)
T ss_pred ehHhhcCc----hhhcchhcCCHHHHHH
Confidence 99998544 4568999888766543
No 370
>PRK08068 transaminase; Reviewed
Probab=99.36 E-value=9.2e-11 Score=136.44 Aligned_cols=259 Identities=13% Similarity=0.115 Sum_probs=159.4
Q ss_pred cccccccccCCCChhhhhcc-----cccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChH-HH
Q 001769 590 SMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AG 660 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa-~a 660 (1016)
.++.|+.+.+..++...... ...... .-|.| .+|..++..++.+++.+..|.+ .. .+..++|+ ++
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~---~~Y~~---~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPAN---HKYSP---FRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCC---CCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 46788887766543221111 111112 22333 4677777777777776666754 33 44444454 43
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001769 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTY 738 (1016)
Q Consensus 661 e~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~ 738 (1016)
.. .+++.+. .+++.|+++++.++.+...+++.|++++.++++++ ..+|+++++++++ +++++|++++
T Consensus 107 l~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~ 175 (389)
T PRK08068 107 LV---ELPQCLM-----NPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNY 175 (389)
T ss_pred HH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc---ccceEEEEEC
Confidence 32 2333321 35789999999888888888999999999999753 4689999999987 6789999999
Q ss_pred CC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccC--c----CCCCccCCcEEEeCccccccCCCCCCCCeEEE
Q 001769 739 PS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--L----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGP 808 (1016)
Q Consensus 739 Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~--l----~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~ 808 (1016)
|| .+|.+. ..+++|.++|+++|+++++|-+... ...+ . ...+...-.+++.|++|.|++| |-.+|+
T Consensus 176 P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~ 251 (389)
T PRK08068 176 PNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA----GWRVAF 251 (389)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc----cceeEe
Confidence 95 688887 2457888899999999999977521 1111 0 0011112337788999999654 567999
Q ss_pred EEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 809 IGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 809 i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+++++++...+-... . .. .++. + .....++..++. -+.+-++...+...++.+++.+.|++
T Consensus 252 ~~~~~~l~~~l~~~~------------~-~~-~~~~-~---~~~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~ 312 (389)
T PRK08068 252 AVGNESVIEAINLLQ------------D-HL-FVSL-F---GAIQDAAIEALL-SDQSCVAELVARYESRRNAFISACRE 312 (389)
T ss_pred EecCHHHHHHHHHHH------------h-hc-cCCC-C---hHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998877665431100 0 00 1111 1 011111222232 23344666677777788889899987
No 371
>PLN02656 tyrosine transaminase
Probab=99.36 E-value=4.7e-11 Score=139.93 Aligned_cols=207 Identities=15% Similarity=0.174 Sum_probs=134.8
Q ss_pred ccccccccccCC----CChhhhhccccccccc--ccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeecCChHHH
Q 001769 589 HSMIPLGSCTMK----LNATTEMMPVTWPSFA--NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAG 660 (1016)
Q Consensus 589 ~~~i~LGs~t~~----~~~~~~~~~~~~~~f~--~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa~a 660 (1016)
.++|.|+.|.+. +++.......-...+. ..+.|.| .+|..++...+.+++....|.. ...+..++|++.
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 467899988876 4433222221100011 1234444 4677666666666666655543 334445555431
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001769 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTY 738 (1016)
Q Consensus 661 e~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~ 738 (1016)
+..++++.+. +++++|++++..|..+...+...|++++.+++++ ++.+|+++++++++ +++++|++++
T Consensus 108 --al~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~ 177 (409)
T PLN02656 108 --AIDVALSMLA-----RPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD---QNTVALVIIN 177 (409)
T ss_pred --HHHHHHHHHh-----CCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEEC
Confidence 2333443331 3578999999988877777888999999999863 35799999999997 7899999999
Q ss_pred CC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccCc-CCC-CccC---CcEEEeCccccccCCCCCCCCeEEEE
Q 001769 739 PS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL-TSP-GYIG---ADVCHLNLHKTFCIPHGGGGPGMGPI 809 (1016)
Q Consensus 739 Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~l-~~p-g~~G---aDi~~~s~hK~~~~phg~GGPg~G~i 809 (1016)
|+ .+|.+. .++++|+++|+++|+++++|.+..- ...+- ..| ..++ -=|++.|+.|+|++| |..+|++
T Consensus 178 P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~p----GlRiG~~ 253 (409)
T PLN02656 178 PGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVP----GWRLGWF 253 (409)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCc----ceeEEEE
Confidence 95 688874 2799999999999999999976531 11110 011 1111 125677899998665 6889999
Q ss_pred EEc
Q 001769 810 GVK 812 (1016)
Q Consensus 810 ~~~ 812 (1016)
++.
T Consensus 254 i~~ 256 (409)
T PLN02656 254 VTT 256 (409)
T ss_pred EEe
Confidence 984
No 372
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.36 E-value=5e-10 Score=130.48 Aligned_cols=302 Identities=13% Similarity=0.157 Sum_probs=179.8
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHc-----CCCCccEEEccchHHHHHHHH
Q 001769 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLT-----GLPMSNASLLDEGTAAAEAMA 245 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~-----G~~~anasl~~~~Taa~eA~~ 245 (1016)
++.|.-+...|+.+.+.+.+.......|.|. +|. .++++.+++++ +.+..++.++.|+|.++..++
T Consensus 35 l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 105 (397)
T PRK07568 35 LNIGQPDIKTPEVFFEAIKNYDEEVLAYSHS-----QGI----PELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAM 105 (397)
T ss_pred ecCCCCCCCCCHHHHHHHHHHhcCCcCcCCC-----CCC----HHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHH
Confidence 4555444445666655554322223445542 222 34556677766 466778999999998888776
Q ss_pred HHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----------hhhhc-cCCCEeEEEEEcC-CCCeee
Q 001769 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEV 312 (1016)
Q Consensus 246 ~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-----------~~L~~-l~~~t~~V~v~~p-n~~G~i 312 (1016)
.++. ++||+|++++-.|+.+...++ ..|++++.++. +++++ +++++++|++.+| |.+|.+
T Consensus 106 ~~l~---~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~ 178 (397)
T PRK07568 106 MAIC---DPGDEILVPEPFYANYNGFAT----SAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVV 178 (397)
T ss_pred HHhc---CCCCEEEEecCCCccHHHHHH----HcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCcc
Confidence 6652 378999999987776555443 45777776653 23444 5678899998888 689988
Q ss_pred c---cHHHHHHHHHhCCcEEEEEecccc-ccC----CCCCCcc-c---ceEEEecC-ccccccCCCCCcceEEEEee-hh
Q 001769 313 L---DYGDFIKNAHANGVKVVMATDLLA-LTI----LKPPGEL-G---ADIVVGSA-QRFGVPMGYGGPHAAFLATS-QE 378 (1016)
Q Consensus 313 ~---dl~eI~~lah~~GalviV~a~~~a-lg~----l~~pg~~-G---aDivvgs~-k~lg~P~g~GGP~~Gfl~~~-~~ 378 (1016)
. ++++|+++|+++|++++++. ... +.. ..+...+ + --|++.|. |.|+.| |--.|++.+. ++
T Consensus 179 ~~~~~~~~i~~~~~~~~~~ii~De-~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~~~~~~~~ 253 (397)
T PRK07568 179 YTKEELEMLAEIAKKHDLFLISDE-VYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSAC----GARIGCLISKNKE 253 (397)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEec-cchhcccCCCCccChhhcCCCcCCEEEEecchhhccCC----CcceEEEecCCHH
Confidence 6 58999999999999999943 221 110 0011111 1 22677776 877643 2246887764 45
Q ss_pred hhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 001769 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 458 (1016)
Q Consensus 379 l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~ 458 (1016)
+++.+-. ... ...|++......++. ++. .+.+-++++.++..++..++.
T Consensus 254 ~~~~~~~---------------------------~~~--~~~~~s~~~q~~~~~-~l~-~~~~~~~~~~~~~~~~~~~l~ 302 (397)
T PRK07568 254 LIAAAMK---------------------------LCQ--ARLSPPTLEQIGAAA-LLD-TPESYFDEVREEYKKRRDILY 302 (397)
T ss_pred HHHHHHH---------------------------Hhh--ccCCCCcHHHHHHHH-Hhh-CCHHHHHHHHHHHHHHHHHHH
Confidence 5443200 000 011211111111111 111 233446677777888889999
Q ss_pred HHHhcCCCeEEcCC--CCccEEEEecCC--HHHHHHHHHH------cCceeecc---------cCCeEEEEeccCCCHHH
Q 001769 459 LGLKKLGTVEVQGL--PFFDTVKVKCAD--AHAIASAAYK------IEMNLRVV---------DSNTVTASFDETTTLED 519 (1016)
Q Consensus 459 ~~L~~~G~~~l~~~--~~~~~v~i~~~~--~~~v~~~L~~------~GI~~~~~---------~~~~lris~te~~t~ed 519 (1016)
+.|++++++.+..+ .++ +.++.+. ..++.+.|.+ +||.+.+. ..+.+|+|+. .+.++
T Consensus 303 ~~L~~~~~~~~~~p~g~~~--~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~ 378 (397)
T PRK07568 303 EELNKIPGVVCEKPKGAFY--IIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEED 378 (397)
T ss_pred HHHhcCCCceecCCCcceE--EEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHH
Confidence 99988743655422 122 2344442 6788888865 58876431 1358999987 35788
Q ss_pred HHHHHHHHh
Q 001769 520 VDKLFIVFA 528 (1016)
Q Consensus 520 id~ll~aL~ 528 (1016)
+++.++.|.
T Consensus 379 ~~~~~~~l~ 387 (397)
T PRK07568 379 LKRAMEILK 387 (397)
T ss_pred HHHHHHHHH
Confidence 888888885
No 373
>PLN02452 phosphoserine transaminase
Probab=99.35 E-value=1.3e-10 Score=133.79 Aligned_cols=282 Identities=13% Similarity=0.050 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHcCCCCc-cE-EEccchHHHHHHHHHHhccccCCCCEEEE-cCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 210 LESLLNFQTMIADLTGLPMS-NA-SLLDEGTAAAEAMAMCNNIQKGKKKTFII-ASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~~~a-na-sl~~~~Taa~eA~~~a~~~~~~~gd~Vlv-s~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
.+.+.+.++.+.+|++.+.. .+ .+..|||.+.|++.+.+-. +++++++ ....+..-.. ..|+.+|...+..
T Consensus 51 ~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~---~~~~~l~~~~G~fg~r~~---~~a~~~g~~~~~~ 124 (365)
T PLN02452 51 LSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCK---PGDKADFVVTGSWSKKAA---KEAKKYCKTNVIA 124 (365)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCC---CCCeEEEEECCHHHHHHH---HHHHHhCCCcEEE
Confidence 46778888999999998643 23 3447889999999887731 4566554 4444433221 2234455433332
Q ss_pred C--c------hhhhc--cCCCEeEEEEEcC-CCCee-eccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEE
Q 001769 287 D--L------KDIDY--KSGDVCGVLVQYP-GTEGE-VLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (1016)
Q Consensus 287 d--~------~~L~~--l~~~t~~V~v~~p-n~~G~-i~dl~eI~~lah~~GalviV~a~~~alg~l-~~pg~~GaDivv 353 (1016)
. . -+++. .+++...|.+++- +.+|+ +.|++++.+ ++++||+ ..+++.. .+..+||+|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa-~Ss~g~~pidv~~~~v~~-- 195 (365)
T PLN02452 125 SGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFKDYPDVGN------VPLVADM-SSNFLSKPVDVSKYGVIY-- 195 (365)
T ss_pred ecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcEecCcccccCC------CeEEEEC-CccccCcccCHHHcCEEE--
Confidence 1 1 12222 3456777776654 67899 589988853 7888843 2233332 3457889877
Q ss_pred ecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHH
Q 001769 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1016)
Q Consensus 354 gs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~ 433 (1016)
.++||. +|-||+|++++|++++++++... + ..+.+....++ ..-..|+|+ ..++++.+++
T Consensus 196 ~saqK~-----lGP~Gl~~v~vr~~~l~~~~~~~----------~-~~~~~~~~~~~-~s~~~TP~v---~~i~~l~~aL 255 (365)
T PLN02452 196 AGAQKN-----VGPSGVTIVIIRKDLIGNARPIT----------P-GMLDYKIHAEN-DSLYNTPPC---FGIYMCGLVF 255 (365)
T ss_pred Eecccc-----cCCCCeEEEEEcHHHHhhcccCC----------C-chhhHHHHHhc-CCccCChhH---HHHHHHHHHH
Confidence 466553 23357899999999987764211 1 11211110000 011246666 5666666665
Q ss_pred HHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCe-EE-cCCC--CccEEEEecCC---HHHHHHHHHHcCceeec--cc
Q 001769 434 YAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTV-EV-QGLP--FFDTVKVKCAD---AHAIASAAYKIEMNLRV--VD 503 (1016)
Q Consensus 434 y~~~~g~~-Gl~~ia~~~~~~a~~L~~~L~~~G~~-~l-~~~~--~~~~v~i~~~~---~~~v~~~L~~~GI~~~~--~~ 503 (1016)
.|+..+ |++.+.+|..+++++|++.|++..|+ .. ..+. ....++|++++ ..++.+.+.++|+..-. ..
T Consensus 256 --~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~ 333 (365)
T PLN02452 256 --EDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRS 333 (365)
T ss_pred --HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccc
Confidence 666665 89999999999999999999986226 11 1111 11246666655 67899999999996522 12
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 504 SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 504 ~~~lris~te~~t~edid~ll~aL~ 528 (1016)
-+.+|+|.=...+.+++++|++.++
T Consensus 334 ~gg~R~s~yna~~~~~v~~L~~~m~ 358 (365)
T PLN02452 334 VGGMRASIYNAMPLAGVEKLVAFMK 358 (365)
T ss_pred cCceEEECcCCCCHHHHHHHHHHHH
Confidence 2349999999999999999999886
No 374
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.35 E-value=2.6e-10 Score=131.79 Aligned_cols=298 Identities=12% Similarity=0.103 Sum_probs=183.8
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhcc
Q 001769 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~ 250 (1016)
++.|..+...|+.+.+++.+...-...|.+-+ ..++++.+|+.+|+++.++.+.+|++.++..++.++.
T Consensus 37 l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~----------~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~- 105 (369)
T PRK08153 37 IGANESGFGPSPSVIAAMREAAAEIWKYGDPE----------NHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV- 105 (369)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCc----------cHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-
Confidence 34554455566666555554322123344311 3467789999999988899999999887776665542
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-------hhhhc-c-CCCEeEEEEEcC-CCCeeeccHHHHHH
Q 001769 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------KDIDY-K-SGDVCGVLVQYP-GTEGEVLDYGDFIK 320 (1016)
Q Consensus 251 ~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-------~~L~~-l-~~~t~~V~v~~p-n~~G~i~dl~eI~~ 320 (1016)
++||.|++++-.||.+...++. .|.+++.++. +++.+ + .+++++|++.+| |.+|.+.+.+++.+
T Consensus 106 --~~gd~vlv~~p~y~~~~~~~~~----~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~ 179 (369)
T PRK08153 106 --EPGDPVVTSLGAYPTFNYHVAG----FGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVA 179 (369)
T ss_pred --CCCCEEEECCCcchHHHHHHHH----cCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 3799999999999988866542 4777777654 23332 2 457888888888 67999998877777
Q ss_pred HHHhC--CcEEEEEecccc-ccCCCCCCcc----cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeee
Q 001769 321 NAHAN--GVKVVMATDLLA-LTILKPPGEL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1016)
Q Consensus 321 lah~~--GalviV~a~~~a-lg~l~~pg~~----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~ 392 (1016)
+++.. |+++++| +... +..-.....+ .--|++.|. |.||.| |=-.|++++.+++++.+.-
T Consensus 180 l~~~~~~~~~lI~D-E~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~----GlRiG~~v~~~~~~~~l~~------- 247 (369)
T PRK08153 180 FIEALPETTLLVLD-EAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLA----GARVGYAIGAPGTIKAFDK------- 247 (369)
T ss_pred HHHhCCCCcEEEEe-CchhhhcCcccchhhhhcCCCEEEEecchHhccCc----chheeeeecCHHHHHHHHH-------
Confidence 76543 8888883 3322 1100000011 112566675 888543 2235888887776655410
Q ss_pred cCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC
Q 001769 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL 472 (1016)
Q Consensus 393 d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~ 472 (1016)
-+.+.+ .+.. +..++.. .+-..+-++++.++..++.+++.+.|++.| +.....
T Consensus 248 ---------------------~~~~~~--~s~~--~q~~~~~-~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~p~ 300 (369)
T PRK08153 248 ---------------------VRNHFG--MNRI--AQAAALA-ALKDQAYLAEVVGKIAAARDRIAAIARANG-LTPLPS 300 (369)
T ss_pred ---------------------hhcCCC--CCHH--HHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC
Confidence 000111 1111 1112111 111223356677777888888988998887 764432
Q ss_pred -CCccEEEEecC---C-HHHHHHHHHHcCceeecc----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 473 -PFFDTVKVKCA---D-AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 473 -~~~~~v~i~~~---~-~~~v~~~L~~~GI~~~~~----~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
..| +.+..+ . +.++.+.|.++||.++.. .++.+|+++. +++|++.++++|..
T Consensus 301 ~~~f--~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~ 361 (369)
T PRK08153 301 ATNF--VAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPE 361 (369)
T ss_pred cCcE--EEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHH
Confidence 222 333332 2 778999999999998531 2468999987 79999999999963
No 375
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.35 E-value=1.9e-10 Score=135.71 Aligned_cols=206 Identities=15% Similarity=0.227 Sum_probs=132.6
Q ss_pred ccccccccccCC----CChhhhhcccccccc--cccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeecCCh-HH
Q 001769 589 HSMIPLGSCTMK----LNATTEMMPVTWPSF--ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AA 659 (1016)
Q Consensus 589 ~~~i~LGs~t~~----~~~~~~~~~~~~~~f--~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~~sG-a~ 659 (1016)
+.+|+||.|.+. +.+..+....-.... ..++.|.+ .+|..++...+.+++..-.|.+ ...+..++| ++
T Consensus 52 ~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~ 128 (430)
T PLN00145 52 RPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST---CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ 128 (430)
T ss_pred CCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCC---CccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH
Confidence 457899988663 332222111100000 01234444 4676666655555555444443 233444555 44
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEE
Q 001769 660 GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVT 737 (1016)
Q Consensus 660 ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~ 737 (1016)
|. .++++.+. .++++|+++++.+..+...+.+.|++++.+++.+ ++.+|+++++++++ +++++++++
T Consensus 129 al---~l~~~~l~-----~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~ 197 (430)
T PLN00145 129 AI---EIIMSVLA-----QPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD---ENTVAMVII 197 (430)
T ss_pred HH---HHHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC---cCceEEEEe
Confidence 44 34444331 3578999999888777777889999999998743 46899999999997 789999999
Q ss_pred cCC-CCccccc--cHHHHHHHHHHcCcEEEEEccccc-cccC--cCCCCccC---CcEEEeCccccccCCCCCCCCeEEE
Q 001769 738 YPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG--LTSPGYIG---ADVCHLNLHKTFCIPHGGGGPGMGP 808 (1016)
Q Consensus 738 ~Pn-~~G~i~~--di~~I~~ia~~~g~lv~vDga~~~-a~~~--l~~pg~~G---aDi~~~s~hK~~~~phg~GGPg~G~ 808 (1016)
+|| .+|.+.+ ++++|+++|+++|+++++|.+... .... ......++ -=+++.|++|.|++| |..+|+
T Consensus 198 ~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~p----G~RlG~ 273 (430)
T PLN00145 198 NPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVP----GWRLGW 273 (430)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCC----CeeEEE
Confidence 995 6888872 488999999999999999987421 1111 11111121 126677999998776 688999
Q ss_pred EEEc
Q 001769 809 IGVK 812 (1016)
Q Consensus 809 i~~~ 812 (1016)
+++.
T Consensus 274 iv~~ 277 (430)
T PLN00145 274 IATC 277 (430)
T ss_pred EEEe
Confidence 9974
No 376
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.35 E-value=5.1e-11 Score=138.99 Aligned_cols=250 Identities=15% Similarity=0.181 Sum_probs=156.5
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..||++.+++..+...+......... .+.. +...++.+.|+++++.+. .++.+||++++++++.++|.|
T Consensus 52 ~~lGh~~p~v~~ai~~~~~~~~~~~~--~~~~--------~~~~~l~~~l~~~~~~~~-~~~~~SGseA~e~Alk~a~~~ 120 (396)
T PRK04073 52 VNQGHRHPKIIQALKDQADKVTLTSR--AFHS--------DQLGPWYEKVAKLTGKDM-VLPMNTGAEAVETAIKAARRW 120 (396)
T ss_pred ccCCCCCHHHHHHHHHHHhhcccccc--ccCC--------HHHHHHHHHHHhcCCCCe-EEEcCChHHHHHHHHHHHHHH
Confidence 45788876666555554322211111 1111 123467888999888754 477899999999999999887
Q ss_pred HHh-cCC-CCCCEEEE-cCCCccccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEE
Q 001769 672 HKA-RGD-HHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1016)
Q Consensus 672 ~~~-~g~-~~~~~Vlv-~~saHg~~~~~a~~~G~------------~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i 736 (1016)
+.. +|. ..+++|+. ..+.||.........+- .+..++. .|+++++++++ +++++|++
T Consensus 121 ~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~---~~~~~vii 192 (396)
T PRK04073 121 AYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAIT---PNTAAFLV 192 (396)
T ss_pred hhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcc---cCeEEEEE
Confidence 432 231 13345554 57789876544332221 1234443 38999999997 78999999
Q ss_pred EcC-CCCcccccc---HHHHHHHHHHcCcEEEEEcccccccc--C--cC-CCCccCCcEEEeCccccccCCCCCCCCeEE
Q 001769 737 TYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV--G--LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMG 807 (1016)
Q Consensus 737 ~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~--~--l~-~pg~~GaDi~~~s~hK~~~~phg~GGPg~G 807 (1016)
+.| |.+|.+.++ +++|.++|+++|+++++|.++. +++ + +. ......+|++++ .|.++ +||..+|
T Consensus 193 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg----~gg~~ig 265 (396)
T PRK04073 193 EPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALG----GGVFPIS 265 (396)
T ss_pred cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--ccccc----CCCCcce
Confidence 988 567887632 8999999999999999998875 121 1 00 111234687765 48774 4555588
Q ss_pred EEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHh
Q 001769 808 PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE 887 (1016)
Q Consensus 808 ~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~ 887 (1016)
++++++++.+.+.... . .+++.|+...++++.+.|..+-.+++. ++..++.+++.+.|+
T Consensus 266 ~~~~~~~i~~~~~~~~--------------~----~~t~~~~~~~~aaa~aaL~~~~~~~l~---~~~~~~~~~l~~~L~ 324 (396)
T PRK04073 266 CVAANRDILGVFTPGS--------------H----GSTFGGNPLACAVSIAALEVLEEEKLP---ERSLELGEYFKEQLK 324 (396)
T ss_pred EEEEcHHHHhhhcCCC--------------C----CCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHH
Confidence 8999887765542100 0 011223455566666777766445544 455667899999998
Q ss_pred c
Q 001769 888 K 888 (1016)
Q Consensus 888 ~ 888 (1016)
+
T Consensus 325 ~ 325 (396)
T PRK04073 325 E 325 (396)
T ss_pred h
Confidence 6
No 377
>PRK07777 aminotransferase; Validated
Probab=99.35 E-value=6.9e-10 Score=129.02 Aligned_cols=264 Identities=14% Similarity=0.142 Sum_probs=165.4
Q ss_pred HHHHcCCC--Cc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------
Q 001769 220 IADLTGLP--MS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-------- 288 (1016)
Q Consensus 220 iA~L~G~~--~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-------- 288 (1016)
+.+..|.+ +. ++.+++|++.++++++.++. ++||+|+++...|+.+...++. .|.+++.++.
T Consensus 74 ~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~---~~gd~vli~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~ 146 (387)
T PRK07777 74 RRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV---EPGDEVLLIEPYYDSYAAVIAM----AGAHRVPVPLVPDGRGFA 146 (387)
T ss_pred HHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc---CCCCEEEEeCCCchhhHHHHHH----CCCEEEEeecCCccCCCc
Confidence 33345765 33 58889999988887776652 3789999999999988766543 3666555432
Q ss_pred ---hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccc----c-----CCCCCCcccceE
Q 001769 289 ---KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLAL----T-----ILKPPGELGADI 351 (1016)
Q Consensus 289 ---~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~al----g-----~l~~pg~~GaDi 351 (1016)
+++++ +++++++|++.+| |.+|.+. ++++|+++|+++|++++++ +..+. + +...++..+.+|
T Consensus 147 ~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D-e~y~~~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK07777 147 LDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITD-EVYEHLVFDGARHLPLATLPGMRERTV 225 (387)
T ss_pred CCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEe-ccchhcccCCCCcccHhhCCCCcCcEE
Confidence 34555 5678899999888 6899875 5889999999999999994 22211 1 111122245789
Q ss_pred EEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHH
Q 001769 352 VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (1016)
Q Consensus 352 vvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~ 430 (1016)
+++|. |.||.| | =-.|++.+++++++.+-.. +...+.+.+... ..+
T Consensus 226 ~~~S~SK~~g~~-G---lRiG~~~~~~~l~~~~~~~----------------------------~~~~~~~~~~~~-q~~ 272 (387)
T PRK07777 226 TISSAAKTFNVT-G---WKIGWACGPAPLIAAVRAA----------------------------KQYLTYVGGAPF-QPA 272 (387)
T ss_pred EEeechhhccCc-C---ceeEEEecCHHHHHHHHHH----------------------------HhhcccCCCCHH-HHH
Confidence 99997 877644 1 1358888887776554100 000011111111 111
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEe-cC--CHHHHHHHHH-HcCceeecc--
Q 001769 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVK-CA--DAHAIASAAY-KIEMNLRVV-- 502 (1016)
Q Consensus 431 Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~-~~--~~~~v~~~L~-~~GI~~~~~-- 502 (1016)
++.++. .+.+-++++.+...++.+++.+.|++.| +++..+ .++-.+.+. .+ .+.++++.|. ++||.+.+.
T Consensus 273 ~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~ 350 (387)
T PRK07777 273 VAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAG-FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSV 350 (387)
T ss_pred HHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCC-CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchH
Confidence 122122 2334456677888889999999999886 765532 222111221 12 2688999996 579987431
Q ss_pred -c------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 -D------SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 -~------~~~lris~te~~t~edid~ll~aL~ 528 (1016)
. .+.+|+++.. .++++++.++.|.
T Consensus 351 f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~ 381 (387)
T PRK07777 351 FYDPADAWNHLVRFAFCK--RDDTLDEAIRRLR 381 (387)
T ss_pred hCCCCcCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 1 3579999974 6888888888775
No 378
>PRK12414 putative aminotransferase; Provisional
Probab=99.35 E-value=4.7e-10 Score=130.35 Aligned_cols=303 Identities=11% Similarity=0.090 Sum_probs=183.6
Q ss_pred cCCCCCCCCChHHHHHHHH---hCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCC---ccEEEccchHHHHHHH
Q 001769 171 IGMGYYNTHVPPVILRNIM---ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM---SNASLLDEGTAAAEAM 244 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~---~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~---anasl~~~~Taa~eA~ 244 (1016)
++.|.-+...|+.+.+.+. .++ .+.|.|. +|..+....+.+.++++.|++. .++.+++|++.++..+
T Consensus 34 l~~g~p~~~~~~~~~~~~~~~~~~~--~~~Y~~~-----~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 34 LSQGAPNFAPDPALVEGVARAMRDG--HNQYAPM-----AGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHhC--CCCcCCC-----CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 3555434444555544433 222 2446542 5655666667778888889852 4688999999888777
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---------hhhhc-cCCCEeEEEEEcC-CCCeee-
Q 001769 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGEV- 312 (1016)
Q Consensus 245 ~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---------~~L~~-l~~~t~~V~v~~p-n~~G~i- 312 (1016)
+.++. .+||+|++++-.|+.+...++. .|.+++.+++ ++|++ +++++++|++.+| |.+|.+
T Consensus 107 ~~~l~---~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~ 179 (384)
T PRK12414 107 ISALV---HPGDEVIYFEPSFDSYAPIVRL----QGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVF 179 (384)
T ss_pred HHHhc---CCCCEEEEeCCCccchHHHHHH----cCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCC
Confidence 66652 3799999999999887666543 4666666543 33444 6678899998888 689987
Q ss_pred --ccHHHHHHHHHhCCcEEEEEecccc---c-c-CCCCCCcc----cceEEEecC-ccccccCCCCCcceEEEEeehhhh
Q 001769 313 --LDYGDFIKNAHANGVKVVMATDLLA---L-T-ILKPPGEL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYK 380 (1016)
Q Consensus 313 --~dl~eI~~lah~~GalviV~a~~~a---l-g-~l~~pg~~----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~ 380 (1016)
+++++|+++|+++|++++++. ... + + ...+...+ +--|+++|. |.||.| |=-.||+.+.++++
T Consensus 180 s~~~~~~i~~~a~~~~~~ii~De-~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRiG~~v~~~~l~ 254 (384)
T PRK12414 180 SAADLARLAQLTRNTDIVILSDE-VYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVT----GWRVGYCLAPAELM 254 (384)
T ss_pred CHHHHHHHHHHHHHCCeEEEEhh-hhhhccCCCCCccCcccCcCccCcEEEEecccccccCc----cceEEEEecCHHHH
Confidence 478999999999999999832 221 1 1 00011111 123777776 877543 22358888887776
Q ss_pred hcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHH
Q 001769 381 RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALG 460 (1016)
Q Consensus 381 ~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~ 460 (1016)
+.+.. -+....+|++..... ++.. .+..+....++.+...++.+++.+.
T Consensus 255 ~~l~~----------------------------~~~~~~~~~s~~~q~--a~~~-~l~~~~~~~~~~~~~~~~r~~l~~~ 303 (384)
T PRK12414 255 DEIRK----------------------------VHQFMVFSADTPMQH--AFAE-ALAEPASYLGLGAFYQRKRDLLARE 303 (384)
T ss_pred HHHHH----------------------------HHhheecCCCcHHHH--HHHH-HhcCChHHHHHHHHHHHHHHHHHHH
Confidence 55410 011111222222111 1111 1111223445666777888899999
Q ss_pred HhcCCCeEEcCC--CCccEEEEecC-----CHHHHH-HHHHHcCceeecc------c--CCeEEEEeccCCCHHHHHHHH
Q 001769 461 LKKLGTVEVQGL--PFFDTVKVKCA-----DAHAIA-SAAYKIEMNLRVV------D--SNTVTASFDETTTLEDVDKLF 524 (1016)
Q Consensus 461 L~~~G~~~l~~~--~~~~~v~i~~~-----~~~~v~-~~L~~~GI~~~~~------~--~~~lris~te~~t~edid~ll 524 (1016)
|++.| +++..+ .++ +.+.++ ...++. +.|.++||.+.+. . .+.+|+++.. +++++++.+
T Consensus 304 L~~~g-~~~~~~~gg~~--~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~ 378 (384)
T PRK12414 304 LAGSR-FELLPSEGSFF--MLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGA 378 (384)
T ss_pred HHhCC-CeecCCCcceE--EEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHH
Confidence 99887 776532 222 222322 244555 5566789977542 1 3679999994 688888888
Q ss_pred HHHh
Q 001769 525 IVFA 528 (1016)
Q Consensus 525 ~aL~ 528 (1016)
+.|.
T Consensus 379 ~rl~ 382 (384)
T PRK12414 379 RRLC 382 (384)
T ss_pred HHHh
Confidence 8775
No 379
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.34 E-value=1.8e-10 Score=133.73 Aligned_cols=178 Identities=15% Similarity=0.168 Sum_probs=123.3
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~v 704 (1016)
.+|..++.+.+.+++.+-.|+. ...+..++|++. +..++++.+. .++++|+++.+.++.+...+...|.++
T Consensus 65 ~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 137 (384)
T PRK06348 65 SGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACH--GMYLALQSIL-----DPGDEVIIHEPYFTPYKDQIEMVGGKP 137 (384)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHH--HHHHHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEE
Confidence 5676666667777776666654 344555555431 2333444331 357899999998887888888999999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccCcCC
Q 001769 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLTS 778 (1016)
Q Consensus 705 v~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~l~~ 778 (1016)
+.++.++ +..+|+++|+++++ +++++|++++|+ .+|.+. .++++|.++|+++|+++++|.+..- ....-..
T Consensus 138 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 138 IILETYEEDGFQINVKKLEALIT---SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEecCCcCcCCcCCHHHHHHhhC---cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 9998743 34699999999997 688999999995 678876 3588999999999999999976531 1111001
Q ss_pred C-----CccCCcEEEeCccccccCCCCCCCCeEEEEEEccccccc
Q 001769 779 P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 818 (1016)
Q Consensus 779 p-----g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~ 818 (1016)
+ +..+-.+++.|+.|+|++| |..+|++++++++...
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~ 255 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMT----GWRIGYVIAPDYIIET 255 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCc----cccceeeecCHHHHHH
Confidence 1 1112346778999999655 5679999998766544
No 380
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.34 E-value=3.9e-10 Score=130.90 Aligned_cols=267 Identities=15% Similarity=0.155 Sum_probs=166.5
Q ss_pred HHHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 215 NFQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 215 e~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
++++.+|+++ |. +.. ++.+++|++.++..++.++. ++||+|++++-.++.+...++ ..|.+++.++
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~---~~gd~Vl~~~P~y~~~~~~~~----~~g~~~~~v~ 145 (385)
T PRK09276 73 EFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFV---NPGDVVLVPDPGYPVYKIGTI----FAGGEPYFMP 145 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC---CCCCEEEEcCCCCcChHHHHH----HcCCEEEEEe
Confidence 3445666655 54 344 47677888888776665552 379999999999988776654 3577777665
Q ss_pred c----------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCC-----CC----
Q 001769 288 L----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL-----KP---- 343 (1016)
Q Consensus 288 ~----------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l-----~~---- 343 (1016)
. +++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +....... .+
T Consensus 146 ~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~ 224 (385)
T PRK09276 146 LKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHD-AAYSEIAYDGYKPPSFLEV 224 (385)
T ss_pred cCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEe-cchhheecCCCCCCChhcc
Confidence 4 22333 5567899999988 68999886 588999999999999994 33221110 01
Q ss_pred CCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 344 pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
+...+..|+++|. |.||.| |=-.|++++++++++.+.. -+...+.|.
T Consensus 225 ~~~~~~~i~~~S~SK~~g~~----GlRiG~~i~~~~l~~~~~~----------------------------~~~~~~~~~ 272 (385)
T PRK09276 225 PGAKDVGIEFHSLSKTYNMT----GWRIGFAVGNADLIAGLGK----------------------------VKSNVDSGV 272 (385)
T ss_pred CCCcCCEEEEecchhhcCCc----chhheeeeCCHHHHHHHHH----------------------------HHhhccCCC
Confidence 1112446778886 877543 1126899888777665510 000111122
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC---HHHHHHHHH-HcC
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD---AHAIASAAY-KIE 496 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~---~~~v~~~L~-~~G 496 (1016)
++.. ..++..+......-++++.++..++.+++.+.|++.| +++..+ .+| +.+.++. ..++.+.|. ++|
T Consensus 273 ~~~~--q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~--~~v~~~~~~~~~~l~~~ll~~~g 347 (385)
T PRK09276 273 FQAI--QEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-LEVEPPKATFY--VWAPVPKGYTSAEFATLLLDKAG 347 (385)
T ss_pred CHHH--HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceE--EEEECCCCCCHHHHHHHHHHhCC
Confidence 2221 1111111112234467778888888999999999986 776532 222 3344442 678888876 579
Q ss_pred ceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 497 MNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 497 I~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
|.+... .++.+|+++. .+++++.+.++.|.
T Consensus 348 i~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 383 (385)
T PRK09276 348 VVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIK 383 (385)
T ss_pred EEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHh
Confidence 987552 1468999997 46777777777664
No 381
>PRK07550 hypothetical protein; Provisional
Probab=99.34 E-value=9.1e-10 Score=127.97 Aligned_cols=327 Identities=12% Similarity=0.099 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCCCChHHHHHHHH---hCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcC--
Q 001769 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIM---ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG-- 225 (1016)
Q Consensus 151 ~e~~~~l~~la~~n~~~~~~lG~g~y~~~~p~~i~~~i~---~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G-- 225 (1016)
.++.+.+.++.+.++...+ ++.|.-+...+..+.+.+. .++. ...|.|. +|..+.-..+.+.+.+..|
T Consensus 15 ~~~~~~~~~~~~~~~~~i~-l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 15 PEVRAWLAGYDGADGPLID-LSQAVPGYPPPPELLRALAEAAADPA-AHLYGPV-----EGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHhhcCCCeEE-eCCCCCCCCCCHHHHHHHHHHHhCcC-CcCCCCC-----CCCHHHHHHHHHHHHHHhCCC
Confidence 5566666666655554322 3444433333444443332 2222 3445442 3443333333344444445
Q ss_pred CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch----------hhhc-c
Q 001769 226 LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-K 294 (1016)
Q Consensus 226 ~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~----------~L~~-l 294 (1016)
.++.++.+++|++.+...++.++. ++||+|++++-.|+.....++ ..|++++.++.+ ++++ +
T Consensus 88 ~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~~~~~l~~~~ 160 (386)
T PRK07550 88 ISPEQVHITSGCNQAFWAAMVTLA---GAGDEVILPLPWYFNHKMWLD----MLGIRPVYLPCDEGPGLLPDPAAAEALI 160 (386)
T ss_pred CCcceEEEecCcHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHH----hcCCEEEEEecCCCcCCCCCHHHHHHHh
Confidence 345678888888888776665653 379999999998887766653 468888776652 2444 5
Q ss_pred CCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c--c--CCCCCC---cccc-eEEEecC-cccc
Q 001769 295 SGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L--T--ILKPPG---ELGA-DIVVGSA-QRFG 360 (1016)
Q Consensus 295 ~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-l--g--~l~~pg---~~Ga-Divvgs~-k~lg 360 (1016)
++++++|++.+| |.+|.+.+ +++|+++|+++|++++++. ..+ + . ...+.. +.+. .++++|. |.||
T Consensus 161 ~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd-~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 161 TPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDE-TYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA 239 (386)
T ss_pred cccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEec-cchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence 667888888888 68998765 8899999999999999843 211 1 0 000010 1222 3456676 8786
Q ss_pred ccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCc
Q 001769 361 VPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 440 (1016)
Q Consensus 361 ~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~ 440 (1016)
.| |-..|++.++++++..+-. ...+..+|.+......++.+ +. ...
T Consensus 240 ~~----G~RiG~i~~~~~~~~~~~~----------------------------~~~~~~~~~s~~~q~~~~~~-l~-~~~ 285 (386)
T PRK07550 240 LT----GHRVGAVVASPARIAEIEK----------------------------FMDTVAICAPRIGQIAVAWG-LP-NLA 285 (386)
T ss_pred Cc----ccceEeeecCHHHHHHHHH----------------------------HHhhcccCCCcHHHHHHHHH-hc-cHH
Confidence 44 2236899888776655410 00111222212111111111 11 112
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecC--C--HHHHHHHHH-HcCceeecc------cCCeEE
Q 001769 441 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAY-KIEMNLRVV------DSNTVT 508 (1016)
Q Consensus 441 ~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~--~--~~~v~~~L~-~~GI~~~~~------~~~~lr 508 (1016)
+-+++..+++.++.+++.+.|.++.++.+... .++ +.+..+ + ..++++.|. ++||.+.+. ..+.+|
T Consensus 286 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iR 363 (386)
T PRK07550 286 DWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYF--AYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLR 363 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEE--EEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEE
Confidence 33455566777888899999988633655422 122 223332 2 788998875 579987542 246899
Q ss_pred EEeccCCCHHHHHHHHHHHhC
Q 001769 509 ASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 509 is~te~~t~edid~ll~aL~~ 529 (1016)
+++.. .+.+++++.++.|..
T Consensus 364 is~~~-~~~~~~~~~~~~l~~ 383 (386)
T PRK07550 364 LAFAN-ADVAGIGELVERLRA 383 (386)
T ss_pred EEeec-CCHHHHHHHHHHHHh
Confidence 99974 458899999888853
No 382
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.34 E-value=9.1e-10 Score=126.68 Aligned_cols=273 Identities=15% Similarity=0.112 Sum_probs=166.6
Q ss_pred hhHHHHHHHHHHHHHHHcC---CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001769 207 QGRLESLLNFQTMIADLTG---LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1016)
Q Consensus 207 qG~le~i~e~q~~iA~L~G---~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v 283 (1016)
+|..+...++.+.+.+..| .++.++.+++|++.++..++.++.. ++||+|++++-.|+.+...++ ..|.++
T Consensus 56 ~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~--~~gd~Vl~~~p~y~~~~~~~~----~~g~~~ 129 (357)
T TIGR03539 56 WGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL--GPGDTVVIPELAYPTYEVGAL----LAGATP 129 (357)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC--CCCCEEEECCCCcHHHHHHHH----hcCCEE
Confidence 4443333333344444434 5567898999999877665544422 379999999999998876653 358888
Q ss_pred EEeCchhhhcc-CCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-cc-------CCCC---CCcc
Q 001769 284 VVSDLKDIDYK-SGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-LT-------ILKP---PGEL 347 (1016)
Q Consensus 284 ~~vd~~~L~~l-~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-lg-------~l~~---pg~~ 347 (1016)
+.+| +++.+ .+++++|++.+| |.+|.+.+ +++|+++|+++|++++++. ... +. .+.+ ++..
T Consensus 130 ~~v~--~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~~~~~~ 206 (357)
T TIGR03539 130 VAAD--DPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDE-CYLELGWEGRPVSILDPRVCGGDH 206 (357)
T ss_pred eccC--ChhhcCccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEec-chhhhccCCCCccceecccCCCcc
Confidence 7764 33333 357889998888 78998875 6779999999999999942 221 11 1100 0111
Q ss_pred cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHH
Q 001769 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1016)
Q Consensus 348 GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l 426 (1016)
.=.|+++|. |.|+.| |--.|++.+.+++++.+. +.+...+.|++...
T Consensus 207 ~~vi~~~S~SK~~~~~----G~R~G~~i~~~~~~~~~~----------------------------~~~~~~~~~~~~~~ 254 (357)
T TIGR03539 207 TGLLAVHSLSKRSNLA----GYRAGFVAGDPALVAELL----------------------------TVRKHAGLMVPAPV 254 (357)
T ss_pred ccEEEEeccccccCCC----ceeEEEEecCHHHHHHHH----------------------------HHHhhcccCCCHHH
Confidence 113777776 877543 334688887776655441 00000112222222
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccE-EEEecCC-HHHHHHHHHHcCceeecc--
Q 001769 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDT-VKVKCAD-AHAIASAAYKIEMNLRVV-- 502 (1016)
Q Consensus 427 ~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~-v~i~~~~-~~~v~~~L~~~GI~~~~~-- 502 (1016)
...++.+ +.....++++.++..++.+++.+.|++.| +++..+. -.- +.+..+. ..++.+.|.++||.+.+.
T Consensus 255 q~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~-~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~ 329 (357)
T TIGR03539 255 QAAMVAA---LGDDGHVAEQKARYAARRAQLKPALEKAG-FRIDHSE-AGLYLWATRGEDAWDTVDRLAELGILVAPGDF 329 (357)
T ss_pred HHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCC-ccEEEEEECCCCHHHHHHHHHhCCEEECCccc
Confidence 1111111 11223456667777788888999998876 7654321 111 2223333 678889999999987542
Q ss_pred ----cCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 503 ----DSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 503 ----~~~~lris~te~~t~edid~ll~aL 527 (1016)
.++.+|+|+.. +.+++++.++.|
T Consensus 330 f~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 330 YGPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred cCCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 14789999975 578898888765
No 383
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.34 E-value=1.9e-10 Score=133.99 Aligned_cols=267 Identities=13% Similarity=0.151 Sum_probs=167.6
Q ss_pred HHHHHHHHc----C--CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-
Q 001769 216 FQTMIADLT----G--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 288 (1016)
Q Consensus 216 ~q~~iA~L~----G--~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~- 288 (1016)
+++.+|+++ | .++.++.++.|+|.++..++.++. ++|++|++++-.|+.+...++ ..|++++.++.
T Consensus 75 lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~~g~~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~ 147 (391)
T PRK08361 75 LREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLL---EEGDEVIIPDPAFVCYVEDAK----IAEAKPIRIPLR 147 (391)
T ss_pred HHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhc---CCCCEEEEcCCCCcccHHHHH----HcCCEEEEEecC
Confidence 445555554 4 456688899999988777666652 378999999999988777653 35777766543
Q ss_pred ---------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC-----CCC--cc
Q 001769 289 ---------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-----PPG--EL 347 (1016)
Q Consensus 289 ---------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~-----~pg--~~ 347 (1016)
+++++ +++++++|++.+| |.+|.+.| +++|+++|++++++++++ +..+..... +.. ..
T Consensus 148 ~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~ 226 (391)
T PRK08361 148 EENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSD-EPYEHFLYEGAKHYPMIKYAP 226 (391)
T ss_pred CccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEE-cccccceeCCCCCCCHhhcCC
Confidence 34555 6678899999988 67999988 899999999999999984 332211110 101 12
Q ss_pred cceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHH
Q 001769 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1016)
Q Consensus 348 GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l 426 (1016)
..+++++|. |.||.| |+ -.|++.+++++++.+-. . +...+.+++ .+
T Consensus 227 ~~~i~~~s~SK~~~~~-Gl---RiG~~~~~~~~~~~~~~-------------------------~-~~~~~~~~~---~~ 273 (391)
T PRK08361 227 DNTILANSFSKTFAMT-GW---RLGFVIAPEQVIKDMIK-------------------------L-HAYIIGNVA---SF 273 (391)
T ss_pred CCEEEEecCchhcCCc-Hh---hhhhhccCHHHHHHHHH-------------------------H-HhhhccCCC---hH
Confidence 357888887 877543 11 15888887776654410 0 000011221 11
Q ss_pred HHHHHHHHHHHhCc--ccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC--C--HHHHHHHHH-HcCc
Q 001769 427 LANMAAMYAVYHGP--EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA--D--AHAIASAAY-KIEM 497 (1016)
Q Consensus 427 ~a~~Aa~y~~~~g~--~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~--~--~~~v~~~L~-~~GI 497 (1016)
...++..+...+. +.++++.++..++.+.+.+.|++++++++..+ .++ +.+.++ + ..++.+.|. ++||
T Consensus 274 -~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~--~~~~l~~~~~~~~~l~~~l~~~~gv 350 (391)
T PRK08361 274 -VQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY--VFANIDETGMSSEDFAEWLLEKARV 350 (391)
T ss_pred -HHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE--EEEECCCCCCCHHHHHHHHHHhCCE
Confidence 1122221111121 34778888888889999999998843766532 122 222333 2 678888886 4799
Q ss_pred eeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 498 NLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 498 ~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+.+. .++.+|++++. +.+++++.++.|.
T Consensus 351 ~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~ 385 (391)
T PRK08361 351 VVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERME 385 (391)
T ss_pred EEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 87542 24789999884 5677777776664
No 384
>PRK10534 L-threonine aldolase; Provisional
Probab=99.34 E-value=2.4e-10 Score=129.90 Aligned_cols=287 Identities=15% Similarity=0.161 Sum_probs=166.5
Q ss_pred hHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEE
Q 001769 181 PPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 260 (1016)
Q Consensus 181 p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlv 260 (1016)
++.+.+++.........|+| +. ...++++.+|+++|.+. +.++.+|+++....+++. . .+|++|++
T Consensus 13 ~~~~~~a~~~~~~~~~~Y~~---~~------~~~~L~~~la~~~g~~~--~~v~~~g~~a~~~~l~~~-~--~~gd~vi~ 78 (333)
T PRK10534 13 SRAMLEAMMAAPVGDDVYGD---DP------TVNALQDYAAELSGKEA--ALFLPTGTQANLVALLSH-C--ERGEEYIV 78 (333)
T ss_pred CHHHHHHHHhccCCCcccCC---CH------HHHHHHHHHHHHhCCCe--EEEeCchHHHHHHHHHHh-c--CCCCeeEE
Confidence 34444566654444555543 21 23457789999999977 457777876655444444 2 37899999
Q ss_pred cCCCCHHHHHH--HHHhhcCCCeEEEEeC--------chhhhc-cCC------CEeEEEEEcCCCCeeeccHH---HHHH
Q 001769 261 ASNCHPQTIDI--CITRADGFDIKVVVSD--------LKDIDY-KSG------DVCGVLVQYPGTEGEVLDYG---DFIK 320 (1016)
Q Consensus 261 s~~~Hps~~~~--l~~~a~~~gi~v~~vd--------~~~L~~-l~~------~t~~V~v~~pn~~G~i~dl~---eI~~ 320 (1016)
+...|...... ... ..+++++.++ +++|++ +.+ ++++|++.+|+ +|.+.|.+ +|++
T Consensus 79 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~-~G~v~~~~~l~~i~~ 154 (333)
T PRK10534 79 GQAAHNYLYEAGGAAV---LGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH-NGKVLPREYLKQAWE 154 (333)
T ss_pred echhhhhHhcCCchHH---hcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC-CCeecCHHHHHHHHH
Confidence 88777644322 111 1134555443 345555 544 58888888887 49987765 5567
Q ss_pred HHHhCCcEEEEEeccccccCC---C-CCC--cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeec
Q 001769 321 NAHANGVKVVMATDLLALTIL---K-PPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1016)
Q Consensus 321 lah~~GalviV~a~~~alg~l---~-~pg--~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d 393 (1016)
+|+++|++++|| ++..+... . ... ..+.|.++.+. |.|+.+. | |++...+++++.+..
T Consensus 155 ~~~~~~~~lvvD-EA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~--G----~~~~~~~~~i~~~~~-------- 219 (333)
T PRK10534 155 FTRERNLALHVD-GARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPV--G----SLLVGNRDYIKRARR-------- 219 (333)
T ss_pred HHHHcCCeEEee-HHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcc--c----ceEEcCHHHHHHHHH--------
Confidence 889999999994 22112100 1 100 11357555555 7676541 2 366667777655410
Q ss_pred CCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC
Q 001769 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (1016)
Q Consensus 394 ~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~ 473 (1016)
++...+ .++ ++..++..++.. . + +...+..++..+..+++.+.|+++| +++..+
T Consensus 220 -----------------~~~~~~-~~~--~~~~~~~a~~~~-~-l--~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~- 273 (333)
T PRK10534 220 -----------------WRKMTG-GGM--RQAGILAAAGLY-A-L--KHNVARLQEDHDNAAWLAEQLREAG-ADVMRQ- 273 (333)
T ss_pred -----------------HHHHhC-Cch--hhHHHHHHHHHH-H-H--HhhHHHHHHHHHHHHHHHHHHHhCC-CccCCC-
Confidence 000000 011 111111222221 1 1 1112223344556789999999997 877643
Q ss_pred CccEEEEecCC--HHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 474 FFDTVKVKCAD--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 474 ~~~~v~i~~~~--~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
..+-+.+++++ ..++.+.|.++||.++.. ..+|++.+..+|+++++++++.|.
T Consensus 274 ~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~--~~~rl~~~~r~t~e~~~~~~~~l~ 328 (333)
T PRK10534 274 DTNMLFVRVGEEQAAALGEYMRERNVLINAS--PIVRLVTHLDVSREQLAEVVAHWR 328 (333)
T ss_pred CceEEEEECCchhHHHHHHHHHHcCeeecCC--ceEEEEEEeCCCHHHHHHHHHHHH
Confidence 22224455543 678889999999998753 358898877789999999999986
No 385
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.33 E-value=2.5e-10 Score=133.52 Aligned_cols=280 Identities=16% Similarity=0.158 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcC-CCCHHHHHHHHHhhc--------CCC
Q 001769 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIAS-NCHPQTIDICITRAD--------GFD 280 (1016)
Q Consensus 210 le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~-~~Hps~~~~l~~~a~--------~~g 280 (1016)
-+...++.+.+++++|.+...+.++++||.++++++.+.+.. .++++|++.+ ..|.+....+..-.. ..+
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~-~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY-TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH-cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 355677889999999966667889999999999877654321 2577777766 566666555432111 012
Q ss_pred eEEEEeC--------------chhhhc-cCC---CEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEecccc
Q 001769 281 IKVVVSD--------------LKDIDY-KSG---DVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA 337 (1016)
Q Consensus 281 i~v~~vd--------------~~~L~~-l~~---~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~a 337 (1016)
.++..++ +++|++ +.. ++++|++... ++.|.+.+ +++|.++|+++|++++++ +.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D-ev~~ 235 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIAD-EVQT 235 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-cccc
Confidence 2333443 334554 443 5666666543 46698877 999999999999999994 4433
Q ss_pred -ccCCCCC---Cccc--ceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccc
Q 001769 338 -LTILKPP---GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI 411 (1016)
Q Consensus 338 -lg~l~~p---g~~G--aDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhi 411 (1016)
++-.... ..+| .|++.. +|.|++ |-| .|++++++++++.++.. . +.
T Consensus 236 g~g~~g~~~~~~~~~~~~d~~t~-sK~l~~----g~~-~g~~~~~~~~~~~~~~~----------~--~~---------- 287 (413)
T cd00610 236 GFGRTGKMFAFEHFGVEPDIVTL-GKGLGG----GLP-LGAVLGREEIMDAFPAG----------P--GL---------- 287 (413)
T ss_pred CCCcCcchhhHhhcCCCCCeEEE-cccccC----ccc-cEEEEEcHHHHHhhccC----------C--CC----------
Confidence 2211111 1233 466533 388863 222 56777888887765100 0 00
Q ss_pred cccccCCccchhhHH-HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC-eEEc----CCCCccEEEEecC--
Q 001769 412 RRDKATSNICTAQAL-LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT-VEVQ----GLPFFDTVKVKCA-- 483 (1016)
Q Consensus 412 RRekaTsnicT~~~l-~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~-~~l~----~~~~~~~v~i~~~-- 483 (1016)
...|. +.+... .+..++ +.++.. .++.+++.++.+++++.|++++. ..+. ....+-.+.+..+
T Consensus 288 --~~~t~--~~~~~~~~a~~a~--l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 358 (413)
T cd00610 288 --HGGTF--GGNPLACAAALAV--LEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRA 358 (413)
T ss_pred --CCCCC--CcCHHHHHHHHHH--HHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCC
Confidence 00111 111111 122222 234333 34677888889999998887631 1111 1111212333322
Q ss_pred ------C-HHHHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 484 ------D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 484 ------~-~~~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
. ..++.+.|.++||.+....++.+|++++..+|++||++++++|.
T Consensus 359 ~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~ 410 (413)
T cd00610 359 TKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALD 410 (413)
T ss_pred cCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHH
Confidence 2 57789999999999877556789999999999999999999986
No 386
>PRK08960 hypothetical protein; Provisional
Probab=99.33 E-value=7.7e-10 Score=128.68 Aligned_cols=305 Identities=16% Similarity=0.153 Sum_probs=178.0
Q ss_pred ccCCCCCCCCChHHHHHHHHhCCC-cccccCCChhHHhhhHHHHHHHHHHHHHHHc----C--CCCccEEEccchHHHHH
Q 001769 170 FIGMGYYNTHVPPVILRNIMENPA-WYTQYTPYQAEIAQGRLESLLNFQTMIADLT----G--LPMSNASLLDEGTAAAE 242 (1016)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~i~~~~~-~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~----G--~~~anasl~~~~Taa~e 242 (1016)
.++.|.-+...|..+.+.+.+.-. -...|.| .+|. .++++.+|+++ | .++.++.+++|++.++.
T Consensus 36 ~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~-----~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 106 (387)
T PRK08960 36 HLEIGEPDFTTAEPIVAAGQAALAAGHTRYTA-----ARGL----PALREAIAGFYAQRYGVDVDPERILVTPGGSGALL 106 (387)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHhcCCCccCC-----CCCC----HHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH
Confidence 356665554556666544432111 0133543 2333 33556677765 3 56678999999998887
Q ss_pred HHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----------hhhhc-cCCCEeEEEEEcC-CCCe
Q 001769 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KDIDY-KSGDVCGVLVQYP-GTEG 310 (1016)
Q Consensus 243 A~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----------~~L~~-l~~~t~~V~v~~p-n~~G 310 (1016)
.++.++. ++||+|++++-.|+.+...++. .|.+++.+++ +++++ ++++++++++.+| |.+|
T Consensus 107 ~~~~~~~---~~gd~vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG 179 (387)
T PRK08960 107 LASSLLV---DPGKHWLLADPGYPCNRHFLRL----VEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTG 179 (387)
T ss_pred HHHHHhc---CCCCEEEEcCCCCcchHHHHHh----cCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCC
Confidence 7665552 3799999999999999887754 3555555443 23444 5677888888888 7899
Q ss_pred eecc---HHHHHHHHHhCCcEEEEEeccccccC---CCCCCcccce-EEEecC-ccccccCCCCCcceEEEEeehhhhhc
Q 001769 311 EVLD---YGDFIKNAHANGVKVVMATDLLALTI---LKPPGELGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRM 382 (1016)
Q Consensus 311 ~i~d---l~eI~~lah~~GalviV~a~~~alg~---l~~pg~~GaD-ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~ 382 (1016)
.+.+ +++|+++||++|++++++.....+.. ..+...+.-+ |+++|. |.||.| |=-.|++++.+++++.
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRiG~~~~~~~~~~~ 255 (387)
T PRK08960 180 TLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMT----GWRLGWLVAPPAAVPE 255 (387)
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCc----ccEEEEEEcCHHHHHH
Confidence 9876 56778889999999999431111110 0111122223 566666 777533 1237999988777655
Q ss_pred CCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHh
Q 001769 383 MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLK 462 (1016)
Q Consensus 383 lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~ 462 (1016)
+.. -+...++|++...-..+.+++ .-....-++++.++..++.+.+.+.|+
T Consensus 256 ~~~----------------------------~~~~~~~~~s~~~q~a~~~~l-~~~~~~~l~~~~~~~~~~~~~l~~~L~ 306 (387)
T PRK08960 256 LEK----------------------------LAQNLYISASTPAQHAALACF-EPETLAILEARRAEFARRRDFLLPALR 306 (387)
T ss_pred HHH----------------------------HHhhhccCCCHHHHHHHHHHh-hcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 410 000112232222111112221 111123355666677777888999998
Q ss_pred cCCCeEEcC-C--CCccEEEEecC----CHHHHHHHHH-HcCceeecc-------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 463 KLGTVEVQG-L--PFFDTVKVKCA----DAHAIASAAY-KIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 463 ~~G~~~l~~-~--~~~~~v~i~~~----~~~~v~~~L~-~~GI~~~~~-------~~~~lris~te~~t~edid~ll~aL 527 (1016)
+.| +.+.. + .+| +.++.+ +..++++.|. ++||.+.+. .++.+|++++. +.+.+.+.++.|
T Consensus 307 ~~~-~~~~~~p~g~~f--~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l 381 (387)
T PRK08960 307 ELG-FGIAVEPQGAFY--LYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERI 381 (387)
T ss_pred hcC-CcCCcCCCeeEE--EEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 886 65421 1 122 233332 2678888765 579987542 13689999995 456665555554
Q ss_pred h
Q 001769 528 A 528 (1016)
Q Consensus 528 ~ 528 (1016)
.
T Consensus 382 ~ 382 (387)
T PRK08960 382 A 382 (387)
T ss_pred H
Confidence 3
No 387
>PRK09148 aminotransferase; Validated
Probab=99.33 E-value=1.3e-10 Score=136.12 Aligned_cols=262 Identities=16% Similarity=0.164 Sum_probs=158.9
Q ss_pred cccccccccCCCChhhhhcc-----cccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGE 661 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~ae 661 (1016)
.+|.|+.+.+.+++...... ...+. ++.|.+ .+|..++...+.+++.+.+|.+ .. .+..++|++.
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~- 103 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPR---THRYSA---SKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE- 103 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcc---cCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH-
Confidence 46788888776654322211 11111 233444 5677777777888887776764 33 4556666542
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-
Q 001769 662 YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS- 740 (1016)
Q Consensus 662 ~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn- 740 (1016)
+..++++.+. .+++.|+++++.+..+...+...|.+++.++.+.++. ++++++++++.+.+++++|++++||
T Consensus 104 -al~~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~N 176 (405)
T PRK09148 104 -GFANMAQAIT-----APGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSN 176 (405)
T ss_pred -HHHHHHHHhc-----CCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCC
Confidence 2333333331 3578999999988877777888999999999876543 4556666665444789999999985
Q ss_pred CCccccc--cHHHHHHHHHHcCcEEEEEccccccc-cC--cCC----CCccCCcEEEeCccccccCCCCCCCCeEEEEEE
Q 001769 741 THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1016)
Q Consensus 741 ~~G~i~~--di~~I~~ia~~~g~lv~vDga~~~a~-~~--l~~----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~ 811 (1016)
.+|.+.+ .+++|+++|+++|+++++|.+...-. .. ... ++..+..+++.|++|.|++| |..+|++++
T Consensus 177 PtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~p----GlR~G~~v~ 252 (405)
T PRK09148 177 PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMA----GWRMGFAVG 252 (405)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCc----chheeeeeC
Confidence 6888872 35789999999999999998753111 00 001 11112235678999999655 467999998
Q ss_pred cccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 812 ~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
++++...+-. . +...+.+. +.....++..+|. -+.+-+++..+...++.+++.+.|++
T Consensus 253 ~~~~i~~l~~-~-------------~~~~~~~~----~~~~q~~~~~~L~-~~~~~~~~~~~~~~~~r~~l~~~L~~ 310 (405)
T PRK09148 253 NERLIAALTR-V-------------KSYLDYGA----FTPIQVAATAALN-GPQDCIAEMRELYKKRRDVLVESFGR 310 (405)
T ss_pred CHHHHHHHHH-H-------------HHHhccCC----ChHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8766554311 0 00000111 1111122223332 12333556566677788888888877
No 388
>PRK03321 putative aminotransferase; Provisional
Probab=99.33 E-value=3.8e-11 Score=137.57 Aligned_cols=170 Identities=15% Similarity=0.161 Sum_probs=120.6
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++.+++++|.+...+..++|++.. ...+++... +++++|+++...+..++..++..|.+++.++.++++.
T Consensus 60 ~~lr~~ia~~~~~~~~~I~~~~G~~~~--l~~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 132 (352)
T PRK03321 60 VELRAALAEHLGVPPEHVAVGCGSVAL--CQQLVQATA-----GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHT 132 (352)
T ss_pred HHHHHHHHHHhCcCHHHEEECCCHHHH--HHHHHHHhc-----CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCC
Confidence 467788888889876566667776532 223333321 3578999987766556666788999999999987788
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHH--cCcEEEEEccccc-cccCcCCCC----ccCCc-
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMN-AQVGLTSPG----YIGAD- 785 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~--~g~lv~vDga~~~-a~~~l~~pg----~~GaD- 785 (1016)
+|+++++++++ +++++|++++| |.+|.+. |.++|.++|+. +|+++++|.+... .......+. +...+
T Consensus 133 ~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 208 (352)
T PRK03321 133 HDLDAMAAAIT---DRTRLIFVCNPNNPTGTVV-TPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNV 208 (352)
T ss_pred CCHHHHHHhhc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCE
Confidence 99999999997 78899999998 4689997 89999999997 5899999987531 111110010 11123
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
+++.|+.|.|++| |-++|++++++++.+.+
T Consensus 209 i~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~ 238 (352)
T PRK03321 209 VVLRTFSKAYGLA----GLRVGYAVGHPEVIAAL 238 (352)
T ss_pred EEEecchHHhhhH----HHhhhhhcCCHHHHHHH
Confidence 4566889998543 45689999887766544
No 389
>PRK03321 putative aminotransferase; Provisional
Probab=99.33 E-value=3.4e-10 Score=129.72 Aligned_cols=264 Identities=14% Similarity=0.141 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+|+++|.+..++.+.+|+++++..++.++ . ++||+|+++...++.+...+ +..|++++.++.+
T Consensus 59 ~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~-~--~~gd~Vli~~p~y~~~~~~~----~~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 59 AVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT-A--GPGDEVIFAWRSFEAYPILV----QVAGATPVQVPLTPDH 131 (352)
T ss_pred HHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh-c--CCCCEEEeCCCCHHHHHHHH----HHcCCEEEEccCCCCC
Confidence 456778999999998888988888887766655444 2 37999999987776654443 3468888877653
Q ss_pred -----hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEeccccccCCC----CCC----cccceEE
Q 001769 290 -----DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILK----PPG----ELGADIV 352 (1016)
Q Consensus 290 -----~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~--~GalviV~a~~~alg~l~----~pg----~~GaDiv 352 (1016)
++++ +++++++|++.+| |.+|.+.|.++|.++++. +|++++++ +........ ++- ...--++
T Consensus 132 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~vi~ 210 (352)
T PRK03321 132 THDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD-EAYVEYVRDDDVPDGLELVRDHPNVVV 210 (352)
T ss_pred CCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe-chHHHhccCcCCCcHHHHHhhCCCEEE
Confidence 3444 5678899999888 789999999999999997 48888884 322110110 100 0111245
Q ss_pred EecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHH-HHHH
Q 001769 353 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL-LANM 430 (1016)
Q Consensus 353 vgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l-~a~~ 430 (1016)
++|. |.||.| |=-.||+++++++++.+... . ...+.+... .+..
T Consensus 211 ~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~----------------------------~--~~~~~s~~~q~~a~ 256 (352)
T PRK03321 211 LRTFSKAYGLA----GLRVGYAVGHPEVIAALRKV----------------------------A--VPFSVNSLAQAAAI 256 (352)
T ss_pred EecchHHhhhH----HHhhhhhcCCHHHHHHHHHh----------------------------c--CCCCCCHHHHHHHH
Confidence 6665 877533 11258888887776655100 0 011111111 1111
Q ss_pred HHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceeecccCCeEE
Q 001769 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVT 508 (1016)
Q Consensus 431 Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~~~~~lr 508 (1016)
+++ ...+-+.+..++..+...++.+.|++.| +.+... ..| +.+..+. ..++.+.|.++||.+.......+|
T Consensus 257 ~~l----~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~~~~g~~--i~i~l~~~~~~~~~~l~~~gI~v~~~~~~~iR 329 (352)
T PRK03321 257 ASL----AAEDELLERVDAVVAERDRVRAALRAAG-WTVPPSQANF--VWLPLGERTADFAAAAAEAGVVVRPFAGEGVR 329 (352)
T ss_pred HHh----cCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCCCE--EEEeCCCCHHHHHHHHHHCCEEEEccCCCcEE
Confidence 211 1222233333444555567888888876 665421 222 3444444 788999999999998876566799
Q ss_pred EEeccCCCHHHHHHHHHHHh
Q 001769 509 ASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 509 is~te~~t~edid~ll~aL~ 528 (1016)
+++ .+.++.++++++|.
T Consensus 330 i~~---~~~~~~~~~~~al~ 346 (352)
T PRK03321 330 VTI---GAPEENDAFLRAAR 346 (352)
T ss_pred Eee---CCHHHHHHHHHHHH
Confidence 997 58999999999985
No 390
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=6.6e-10 Score=129.29 Aligned_cols=307 Identities=17% Similarity=0.185 Sum_probs=190.5
Q ss_pred cCCCCCCCCChHHHHHHHHh---CCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCC--CCcc-EEEccchHHHHHHH
Q 001769 171 IGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL--PMSN-ASLLDEGTAAAEAM 244 (1016)
Q Consensus 171 lG~g~y~~~~p~~i~~~i~~---~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~--~~an-asl~~~~Taa~eA~ 244 (1016)
+|.|.=+...|..+.+++.. ++. +.|+|. +|..+.-....+...+-.|. ++.+ +.++.|++.++..+
T Consensus 33 l~iG~Pd~~~p~~i~~a~~~a~~~~~--~~Y~~~-----~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~ 105 (393)
T COG0436 33 LSIGEPDFPTPEHIIEAAIEALEEGG--THYTPS-----AGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLA 105 (393)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHhccc--CCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHH
Confidence 46775455677777645443 332 156553 44444333333444455453 3444 88999999887777
Q ss_pred HHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----------hhhhc-cCCCEeEEEEEcC-CCCee
Q 001769 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGE 311 (1016)
Q Consensus 245 ~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~-----------~~L~~-l~~~t~~V~v~~p-n~~G~ 311 (1016)
++++. ++||+|++++-.+|++...++. .|.+++.+++ ++|++ ++++|++|++.+| |.+|.
T Consensus 106 ~~a~~---~pGDeVlip~P~Y~~y~~~~~~----~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGa 178 (393)
T COG0436 106 FLALL---NPGDEVLIPDPGYPSYEAAVKL----AGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGA 178 (393)
T ss_pred HHHhc---CCCCEEEEeCCCCcCHHHHHHh----cCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCc
Confidence 77763 3899999999999999988754 3666666552 34555 7789999999999 68998
Q ss_pred ec---cHHHHHHHHHhCCcEEEEEeccccc--cC--CCCCCcc----cceEEEecC-ccccccCCCCCcceEEEEee-hh
Q 001769 312 VL---DYGDFIKNAHANGVKVVMATDLLAL--TI--LKPPGEL----GADIVVGSA-QRFGVPMGYGGPHAAFLATS-QE 378 (1016)
Q Consensus 312 i~---dl~eI~~lah~~GalviV~a~~~al--g~--l~~pg~~----GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~-~~ 378 (1016)
+. .+++|+++|+++|++++.+--...+ .- ..+..+. ..=|.+.|. |.|+.+ |=-.||+++. ++
T Consensus 179 v~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt----GwRvG~~v~~~~~ 254 (393)
T COG0436 179 VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMT----GWRIGWVVGPPEE 254 (393)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccc----ccceeEeecChHH
Confidence 87 4899999999999999984211111 10 1111111 123455565 888643 3346888877 55
Q ss_pred hhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCc---ccHHHHHHHHHHHHH
Q 001769 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP---EGLKTIAQRVHGLAG 455 (1016)
Q Consensus 379 l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~---~Gl~~ia~~~~~~a~ 455 (1016)
+++.+ ++-+....+|++.. +..|++. ++-++ .-++...+...++.+
T Consensus 255 l~~~~----------------------------~~~~~~~~~~~~~~--~Q~aa~~-aL~~~~~~~~~~~~~~~~~~rrd 303 (393)
T COG0436 255 LIAAL----------------------------RKLKSYLTSCAPTP--AQYAAIA-ALNGPQSDEVVEEMREEYRERRD 303 (393)
T ss_pred HHHHH----------------------------HHHHHhcccCCCHH--HHHHHHH-HhcCccchHHHHHHHHHHHHHHH
Confidence 55443 11223345565443 3344442 23333 245566677888999
Q ss_pred HHHHHHhcCCCeEEcCCCCccE-EEEecC---CHHHHHHHHHHc-Cceeec---c----cCCeEEEEeccCCCHHHHHHH
Q 001769 456 TFALGLKKLGTVEVQGLPFFDT-VKVKCA---DAHAIASAAYKI-EMNLRV---V----DSNTVTASFDETTTLEDVDKL 523 (1016)
Q Consensus 456 ~L~~~L~~~G~~~l~~~~~~~~-v~i~~~---~~~~v~~~L~~~-GI~~~~---~----~~~~lris~te~~t~edid~l 523 (1016)
.+.+.|.+++|+++...|.-.- +-++++ +..++++.|.++ ||.+-+ . ..+.+|+|+.... +++++.
T Consensus 304 ~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a 381 (393)
T COG0436 304 LLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEA 381 (393)
T ss_pred HHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCH--HHHHHH
Confidence 9999999986688775321111 112333 277888888864 887643 1 2368999988654 777777
Q ss_pred HHHHh
Q 001769 524 FIVFA 528 (1016)
Q Consensus 524 l~aL~ 528 (1016)
++.+.
T Consensus 382 ~~rl~ 386 (393)
T COG0436 382 LRRLA 386 (393)
T ss_pred HHHHH
Confidence 77664
No 391
>PRK07682 hypothetical protein; Validated
Probab=99.33 E-value=5.4e-10 Score=129.41 Aligned_cols=268 Identities=13% Similarity=0.171 Sum_probs=167.7
Q ss_pred HHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.+|+++ |. ++. ++.+++|++.++..++.++. ++||+|++++..|+.+...++. .|.+++.++.
T Consensus 62 lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~---~~gd~vl~~~p~y~~~~~~~~~----~g~~~~~~~~ 134 (378)
T PRK07682 62 LRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII---NPGDEVLIVEPSFVSYAPLVTL----AGGVPVPVAT 134 (378)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC---CCCCEEEEeCCCchhhHHHHHH----cCCEEEEeec
Confidence 445555554 44 333 68888999988887766653 3789999999999977766543 3555555432
Q ss_pred ----------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC----C----CC
Q 001769 289 ----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----P----PG 345 (1016)
Q Consensus 289 ----------~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l~----~----pg 345 (1016)
+++++ +.+++++|++.+| |.+|.+. ++++|+++|+++|++++++ +..+..... + ++
T Consensus 135 ~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~ 213 (378)
T PRK07682 135 TLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSD-EIYAELTYDEAYTSFASIKG 213 (378)
T ss_pred CCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEe-hhhhhcccCCCCCChhhccc
Confidence 34555 6678899988888 6899886 4899999999999999984 222211110 0 11
Q ss_pred cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhh
Q 001769 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1016)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~ 424 (1016)
...-.++++|. |.|+.| |=-.||+++++++++.+-. ....+..|++.
T Consensus 214 ~~~~~i~~~S~SK~~~~~----GlR~G~~~~~~~~i~~l~~----------------------------~~~~~~~~~~~ 261 (378)
T PRK07682 214 MRERTILISGFSKGFAMT----GWRLGFIAAPVYFSEAMLK----------------------------IHQYSMMCAPT 261 (378)
T ss_pred ccCCEEEEecCcccccCh----hhhhhhhhcCHHHHHHHHH----------------------------HHHhhccCCCH
Confidence 11235777776 877543 1126899988887766510 00001112222
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC--HHHHHHHHH-HcCcee
Q 001769 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD--AHAIASAAY-KIEMNL 499 (1016)
Q Consensus 425 ~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~--~~~v~~~L~-~~GI~~ 499 (1016)
. +..++..+...+..-++++.++..++.+++.+.|+++| +++..+ .++--+.+...+ ..++.+.|. ++||.+
T Consensus 262 ~--~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 338 (378)
T PRK07682 262 M--AQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-LTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAV 338 (378)
T ss_pred H--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence 1 11222211222334467788888899999999999987 765432 122111121112 678888876 679987
Q ss_pred ecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 500 RVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 500 ~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+- .++.+|+|++. +.+++++.++.|+
T Consensus 339 ~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~ 371 (378)
T PRK07682 339 VPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMK 371 (378)
T ss_pred cCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHH
Confidence 542 25789999984 6889988888885
No 392
>PRK08912 hypothetical protein; Provisional
Probab=99.33 E-value=7.8e-10 Score=128.56 Aligned_cols=268 Identities=16% Similarity=0.163 Sum_probs=166.3
Q ss_pred HHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.+|+++ |. ++. ++.+++|++.+..+++.++. +++|+|+++.-.|+.+...++ ..|++++.+++
T Consensus 68 lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~---~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~ 140 (387)
T PRK08912 68 LRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALV---EPGDEVVLFQPLYDAYLPLIR----RAGGVPRLVRL 140 (387)
T ss_pred HHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhc---CCCCEEEEeCCCchhhHHHHH----HcCCEEEEEec
Confidence 444555443 54 444 78889999988876666552 378999999999998877654 45777776554
Q ss_pred ---------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccc---c------CCCCCC
Q 001769 289 ---------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLAL---T------ILKPPG 345 (1016)
Q Consensus 289 ---------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~al---g------~l~~pg 345 (1016)
+++++ +++++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +.... . +...++
T Consensus 141 ~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~ 219 (387)
T PRK08912 141 EPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICD-EVWEHVVFDGRRHIPLMTLPG 219 (387)
T ss_pred CcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEh-hhhhhcccCCCCCcChhhCCC
Confidence 33444 5678889998888 78998875 777999999999999984 22211 0 000111
Q ss_pred cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhh
Q 001769 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1016)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~ 424 (1016)
..+-+|+++|. |.||.| |--.||+++++++++.+-. .+.....+++.
T Consensus 220 ~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~l~~----------------------------~~~~~~~~~~~ 267 (387)
T PRK08912 220 MRERTVKIGSAGKIFSLT----GWKVGFVCAAPPLLRVLAK----------------------------AHQFLTFTTPP 267 (387)
T ss_pred ccCceEEEeechhhccCc----CceeEEEecCHHHHHHHHH----------------------------HHhhccccCCh
Confidence 12457889997 877543 2347999988877655410 00000111111
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEec---C-CHHHHHHHHH-HcCc
Q 001769 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKC---A-DAHAIASAAY-KIEM 497 (1016)
Q Consensus 425 ~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~---~-~~~~v~~~L~-~~GI 497 (1016)
.....++.. + ....+-++++.++..++.+++.+.|++.| +++... .+|-.+.+.. . ...++++.|. ++||
T Consensus 268 ~~q~~~~~~-l-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV 344 (387)
T PRK08912 268 NLQAAVAYG-L-GKPDDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGV 344 (387)
T ss_pred HHHHHHHHH-H-hCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCE
Confidence 111111111 1 11122346677888888999999999987 776532 2221222211 1 2667888875 5799
Q ss_pred eeecc--------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 498 NLRVV--------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 498 ~~~~~--------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+.+. ..+.+|+++.. ..+++++.++.|.
T Consensus 345 ~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~ 381 (387)
T PRK08912 345 AAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLA 381 (387)
T ss_pred EEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHH
Confidence 77542 13789999995 4777777777664
No 393
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.32 E-value=1.8e-10 Score=134.16 Aligned_cols=213 Identities=13% Similarity=0.161 Sum_probs=138.3
Q ss_pred ccccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC----ce-eeecCChHHHHHH
Q 001769 589 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD----SF-SLQPNAGAAGEYA 663 (1016)
Q Consensus 589 ~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~----~~-~l~~~sGa~ae~a 663 (1016)
..++.|+.|.+.+++.................|.+ .+|..++...+.+++.+.+|.+ .. .+..++|++. +
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~--a 102 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPT---TKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE--A 102 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCC---CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH--H
Confidence 34677888877765542222111111111223433 5677777777777887776654 32 4666666542 2
Q ss_pred HHHHHHHHHHhcCCCCCC--EEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC
Q 001769 664 GLMVIRAYHKARGDHHRN--VCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP 739 (1016)
Q Consensus 664 ~l~air~~~~~~g~~~~~--~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~P 739 (1016)
..++++.+. ++++ .|+++.+.+..+...+.+.|.+++.++++++ ..+|++++++++. +++++|++++|
T Consensus 103 l~~~~~~l~-----~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p 174 (393)
T TIGR03538 103 LFAFAQAVI-----NPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVCSP 174 (393)
T ss_pred HHHHHHHHc-----CCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEeCC
Confidence 333444332 2344 4999998777777778899999999999754 4689999999987 68999999999
Q ss_pred C-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cCc-CCC------CccCCc-----EEEeCccccccCCCCCCC
Q 001769 740 S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSP------GYIGAD-----VCHLNLHKTFCIPHGGGG 803 (1016)
Q Consensus 740 n-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~l-~~p------g~~GaD-----i~~~s~hK~~~~phg~GG 803 (1016)
+ .+|.+. ..+++|+++|+++|+++++|.+...-. ..- ..+ ...+.| |++.|+.|.|++| |
T Consensus 175 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~----G 250 (393)
T TIGR03538 175 GNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLP----G 250 (393)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCc----c
Confidence 5 688876 248899999999999999997643111 100 000 112221 6788999988654 5
Q ss_pred CeEEEEEEccccccc
Q 001769 804 PGMGPIGVKKHLAPF 818 (1016)
Q Consensus 804 Pg~G~i~~~~~l~~~ 818 (1016)
..+|++++++++...
T Consensus 251 lRvG~~i~~~~l~~~ 265 (393)
T TIGR03538 251 LRSGFVAGDAEILKA 265 (393)
T ss_pred cceEEEecCHHHHHH
Confidence 789999988766544
No 394
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.32 E-value=6.1e-10 Score=129.91 Aligned_cols=277 Identities=17% Similarity=0.172 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhc-c--c-cC---CCCEEE-EcCCCCHHHHHHHHHhhcC-----
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-I--Q-KG---KKKTFI-IASNCHPQTIDICITRADG----- 278 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~-~--~-~~---~gd~Vl-vs~~~Hps~~~~l~~~a~~----- 278 (1016)
.+.++++.++++.|++. +.++++||.++|+++...+ + . ++ .+++|| .....|..+...+...-..
T Consensus 74 ~~~~~~~~l~~~~~~~~--~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~ 151 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDK--VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNN 151 (400)
T ss_pred HHHHHHHHHHhCCCCCE--EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhcc
Confidence 56778899999998864 7788999999998765442 1 1 00 235555 5556787777665421100
Q ss_pred -----CCe-EEEEeCchhhhc-cC-CCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEeccc-cccCCCC-
Q 001769 279 -----FDI-KVVVSDLKDIDY-KS-GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLL-ALTILKP- 343 (1016)
Q Consensus 279 -----~gi-~v~~vd~~~L~~-l~-~~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~-alg~l~~- 343 (1016)
.++ .+.+.|+++|++ +. +++++|++..+ |.+|.+.| +++|.++|+++|++++++ +.. ++|--..
T Consensus 152 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D-ev~~g~g~~G~~ 230 (400)
T PTZ00125 152 FGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVD-EIQTGLGRTGKL 230 (400)
T ss_pred CCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-ccccCCCccchh
Confidence 011 122235677777 64 67898888655 68899887 999999999999999984 333 2331111
Q ss_pred --CCccc--ceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCc
Q 001769 344 --PGELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (1016)
Q Consensus 344 --pg~~G--aDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsn 419 (1016)
...+| .|+++. +|.|++ |+...|++++++++.+.+.... . ..|.
T Consensus 231 ~~~~~~~~~pd~~~~-sK~l~~----g~~~ig~v~~~~~~~~~~~~~~----------~----------------~~t~- 278 (400)
T PTZ00125 231 LAHDHEGVKPDIVLL-GKALSG----GLYPISAVLANDDVMLVIKPGE----------H----------------GSTY- 278 (400)
T ss_pred hHHHhcCCCCCEEEE-cccccC----CCcCcEEEEEcHHHHhhccCCC----------C----------------CCCC-
Confidence 11234 487765 488852 4434788999998877652100 0 0010
Q ss_pred cchhhH-HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC----CCeEEc-CCCCccEEEEecC-C--HHHHHH
Q 001769 420 ICTAQA-LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQ-GLPFFDTVKVKCA-D--AHAIAS 490 (1016)
Q Consensus 420 icT~~~-l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~----G~~~l~-~~~~~~~v~i~~~-~--~~~v~~ 490 (1016)
+.+.. ..+..++ +.++..+++ .++..++.+++++.|+++ +.+... +...+-.+.+..+ . +.++.+
T Consensus 279 -~~~~~~~~aa~~~--l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~ 352 (400)
T PTZ00125 279 -GGNPLACAVAVEA--LEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCL 352 (400)
T ss_pred -CcCHHHHHHHHHH--HHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcchHHHHHHH
Confidence 11111 1111122 234333343 345556677777777664 211111 1112222334322 2 678999
Q ss_pred HHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 491 AAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 491 ~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.|.++||.+.+..++.||++++..++++|++++++.|..
T Consensus 353 ~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~ 391 (400)
T PTZ00125 353 KLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKK 391 (400)
T ss_pred HHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 999999998765568899999999999999999999963
No 395
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.32 E-value=1.8e-10 Score=132.23 Aligned_cols=266 Identities=13% Similarity=0.120 Sum_probs=166.4
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~g-d~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----- 288 (1016)
++++.+++..|.++.++.+.+|++.++..++.++. ++| ++|+++.-.|+.+...+ +..|++++.++.
T Consensus 61 ~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~---~~g~~~vli~~P~y~~y~~~~----~~~G~~~~~v~~~~~~~ 133 (351)
T PRK01688 61 AVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC---EPGKDAILYCPPTYGMYSVSA----ETIGVEIRTVPTLDNWQ 133 (351)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc---CCCCCEEEEcCCCHHHHHHHH----HHcCCEEEEeecCCCCC
Confidence 45578999999999999999999988777666652 255 89999998888776554 346888887765
Q ss_pred ---hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccc-cccCCCCC----CcccceEEEecC
Q 001769 289 ---KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLL-ALTILKPP----GELGADIVVGSA 356 (1016)
Q Consensus 289 ---~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~--GalviV~a~~~-alg~l~~p----g~~GaDivvgs~ 356 (1016)
+++++ + +++++|++.+| |.+|.+.+.+++.++++.. +.+++|| +.. .+....+. .+.+==|++.|.
T Consensus 134 ~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivD-Eay~~f~~~~s~~~~~~~~~n~iv~rSf 211 (351)
T PRK01688 134 LDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVAD-EAYIEFCPQASLAGWLAEYPHLVILRTL 211 (351)
T ss_pred CCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE-CchhhcCCCCChHHHHhhCCCEEEEecc
Confidence 23433 4 57899999999 6899999777766665432 5777773 322 12110010 112222566665
Q ss_pred -ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHH
Q 001769 357 -QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1016)
Q Consensus 357 -k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~ 435 (1016)
|.||.| |=-.||+++++++++.+... +...++.+ +...+|...+
T Consensus 212 SK~~gla----GlRiGy~i~~~~~i~~l~~~----------------------------~~~~~v~~---~~~~~a~~~L 256 (351)
T PRK01688 212 SKAFALA----GLRCGFTLANEEVINLLLKV----------------------------IAPYPLST---PVADIAAQAL 256 (351)
T ss_pred hHhhcCH----HHHHhHHhCCHHHHHHHHhc----------------------------cCCCCCCH---HHHHHHHHHH
Confidence 877543 11248888888777655210 00012211 1111111111
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeE-EcCCCCccEEEEecCCHHHHHHHHHHcCceeeccc-----CCeEEE
Q 001769 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-----SNTVTA 509 (1016)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~-l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~-----~~~lri 509 (1016)
...+.+-+++..+++.+..+++.+.|+++++++ +..+ .-+-+.++++.+.++.+.|.++||.++... ++.+|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps-~~nfi~~~~~~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRi 335 (351)
T PRK01688 257 SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDS-ETNYILARFTASSAVFKSLWDQGIILRDQNKQPGLSNCLRI 335 (351)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcCCHHHHHHHHHHCCeEEEECCCcCCCCCeEEE
Confidence 111112244455666677789999999885464 4332 112244455557889999999999887531 478999
Q ss_pred EeccCCCHHHHHHHHHHHh
Q 001769 510 SFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 510 s~te~~t~edid~ll~aL~ 528 (1016)
|++ +.+|.++|+++|+
T Consensus 336 s~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 336 TIG---TREECQRVIDALR 351 (351)
T ss_pred eCC---CHHHHHHHHHhhC
Confidence 988 7899999999873
No 396
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.32 E-value=2.1e-10 Score=130.62 Aligned_cols=288 Identities=20% Similarity=0.242 Sum_probs=189.4
Q ss_pred CCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHH
Q 001769 191 NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTID 270 (1016)
Q Consensus 191 ~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~ 270 (1016)
+.+|+|. +|+ ..+||+.+|+++|... +..+.+||+|...+++|+.+ ++||+||++...+.++..
T Consensus 26 ~sg~i~~-G~~-----------v~~FE~~~ae~~G~k~--ava~~sgT~AL~laL~al~i--g~GDeVI~ps~TfvATan 89 (374)
T COG0399 26 KSGWLTG-GPF-----------VRRFEQAFAEYLGVKY--AVAVSSGTAALHLALLALAI--GPGDEVIVPSFTFVATAN 89 (374)
T ss_pred HcCCeec-ChH-----------HHHHHHHHHHHhCCCe--EEEecChHHHHHHHHHhcCC--CCCCEEEecCCchHHHHH
Confidence 4578886 553 4568899999999987 88899999999888887765 489999999999999998
Q ss_pred HHHHhhcCCCeEEEEeCch---------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccC
Q 001769 271 ICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI 340 (1016)
Q Consensus 271 ~l~~~a~~~gi~v~~vd~~---------~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~ 340 (1016)
++.. .|.+.+.+|+| .+++ |.++|++|+..+ .+|...|+++|.++|+++|.+|+-++ ++++|.
T Consensus 90 ~i~~----~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVh--l~G~~~dm~~i~~la~~~~l~vIEDa-Aqa~Ga 162 (374)
T COG0399 90 AVLL----VGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVH--LAGQPCDMDAIMALAKRHGLPVIEDA-AQAHGA 162 (374)
T ss_pred HHHH----cCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEeh--hccCCCCHHHHHHHHHHcCCeEEEEc-chhccC
Confidence 8743 48888887764 3666 888899999765 89999999999999999999999843 346664
Q ss_pred C---CCCCcccceEEEecC---ccccccCCCCCcceEEEEeeh-hhhhcCC-CceEeeeecCCCCcceeeeccccccccc
Q 001769 341 L---KPPGELGADIVVGSA---QRFGVPMGYGGPHAAFLATSQ-EYKRMMP-GRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1016)
Q Consensus 341 l---~~pg~~GaDivvgs~---k~lg~P~g~GGP~~Gfl~~~~-~l~~~lp-grivG~s~d~~g~~~~~l~lqtreqhiR 412 (1016)
. +..|.+| |+.++|. |.++ .| .+|.+.+++ ++.+++. -|.-|.+.+. + ..| .|.+
T Consensus 163 ~y~gk~vGt~G-d~~~fSF~~~K~it----tg--EGGav~tnd~ela~k~~~lr~hG~~~~~-~-~~y--------~~~~ 225 (374)
T COG0399 163 TYKGKKVGSFG-DIGAFSFHATKNLT----TG--EGGAVVTNDEELAEKARSLRNHGLSRDA-V-FKY--------LHEE 225 (374)
T ss_pred eecCccccccc-ceEEEEecCCCCcc----cc--CceEEEeCCHHHHHHHHHHHHhCcCCCc-c-ccc--------eeee
Confidence 3 2345555 7777775 6553 33 236777765 4544431 1112222211 0 001 1111
Q ss_pred ccccC-CccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCC-----CccEEEEecCC--
Q 001769 413 RDKAT-SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCAD-- 484 (1016)
Q Consensus 413 RekaT-snicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~-----~~~~v~i~~~~-- 484 (1016)
-|. .+++. +.|++-+..+ +.++++-++=.+++++..+.|+++.++.+...+ .+.-+.+.++.
T Consensus 226 --~G~N~rm~~------iqAAigl~QL--~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~ 295 (374)
T COG0399 226 --LGYNYRLTE------IQAAIGLAQL--ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEG 295 (374)
T ss_pred --cccccCHHH------HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCC
Confidence 111 22332 2333311222 345666666678899999999987435443211 12223343332
Q ss_pred --HHHHHHHHHHcCce----eec-----------------c------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 485 --AHAIASAAYKIEMN----LRV-----------------V------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 485 --~~~v~~~L~~~GI~----~~~-----------------~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
-.++.+.|.++||. .++ + ....+.+-+++.-+.+|+++.+++|.
T Consensus 296 ~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 296 ISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALK 368 (374)
T ss_pred CCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 47899999999773 211 0 12457777888889999999999886
No 397
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.32 E-value=3e-10 Score=132.27 Aligned_cols=227 Identities=18% Similarity=0.206 Sum_probs=136.8
Q ss_pred hhhHHHHHHHHHHHHHHHhC--CCceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G--~~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++...+.+++.. .| ++...+..++| ++|. .++++.+. .++++|+++++.++.+...++..|++
T Consensus 65 ~~g~~~lr~~ia~~~~~-~~~~~~~~~i~~t~G~~~al---~~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 135 (397)
T PRK07568 65 SQGIPELREAFAKYYKK-WGIDVEPDEILITNGGSEAI---LFAMMAIC-----DPGDEILVPEPFYANYNGFATSAGVK 135 (397)
T ss_pred CCCCHHHHHHHHHHHHH-hCCCCCcceEEEcCChHHHH---HHHHHHhc-----CCCCEEEEecCCCccHHHHHHHcCCE
Confidence 45655555444444431 23 34434444444 4443 33333321 35689999988777666667889999
Q ss_pred EEEEcCCC-CCC--CCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEcccccc-ccC-
Q 001769 704 IVSVGTDA-KGN--INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG- 775 (1016)
Q Consensus 704 vv~v~~d~-~g~--iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a-~~~- 775 (1016)
++.++.+. +|. .|+++++++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|.+...- ..+
T Consensus 136 ~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~ 212 (397)
T PRK07568 136 IVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL 212 (397)
T ss_pred EEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC
Confidence 99999863 442 36899999997 789999999995 688876 25899999999999999999765210 001
Q ss_pred -cCCCCcc-C-Cc--EEEeCccccccCCCCCCCCeEEEEEEc-ccccccCCCCccccCCCCCCCCcCCCCCCccCCccch
Q 001769 776 -LTSPGYI-G-AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 776 -l~~pg~~-G-aD--i~~~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~ 849 (1016)
......+ + .| +++.|++|.|++| |..+|++++. +++...+-. . ... ..+.+.
T Consensus 213 ~~~s~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~~~~~~~~~~~~~~~--~-----------~~~--~~~~s~--- 270 (397)
T PRK07568 213 KYTSALSLEGLEDRVIIIDSVSKRYSAC----GARIGCLISKNKELIAAAMK--L-----------CQA--RLSPPT--- 270 (397)
T ss_pred CccChhhcCCCcCCEEEEecchhhccCC----CcceEEEecCCHHHHHHHHH--H-----------hhc--cCCCCc---
Confidence 0011111 1 22 6778999999644 5679999875 444432200 0 000 011111
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
....++..+|. .+.+-++++.+...++..++.+.|++.
T Consensus 271 -~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (397)
T PRK07568 271 -LEQIGAAALLD-TPESYFDEVREEYKKRRDILYEELNKI 308 (397)
T ss_pred -HHHHHHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11122223333 234446666667777888898999763
No 398
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.32 E-value=1.4e-10 Score=135.91 Aligned_cols=240 Identities=19% Similarity=0.237 Sum_probs=150.3
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC---
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--- 711 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~--- 711 (1016)
.+|++.+++++|.+.+ +.+++|++|+..+++++- +++|+| ++.+...++.....+.|.+++.+++++
T Consensus 56 ~~Leeaia~~~g~~~v-v~t~~Gt~Al~la~~al~--------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 56 YDLEDAVQDLFGFKHI-IPTHQGRGAENILFSILL--------KPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHD 125 (431)
T ss_pred HHHHHHHHHHHCCCeE-EEcCCHHHHHHHHHHHhC--------CCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccc
Confidence 4778889999999864 667788877755554431 357766 565434455566788999999999873
Q ss_pred -------CCCCCHHHHHHHHHcC-CCCEEEEEEEcCCC-C-cccc--ccHHHHHHHHHHcCcEEEEEccccc--ccc---
Q 001769 712 -------KGNINIEELRKAAEAN-RDNLSTLMVTYPST-H-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV--- 774 (1016)
Q Consensus 712 -------~g~iD~~~L~~~i~~~-~~~t~~v~i~~Pn~-~-G~i~--~di~~I~~ia~~~g~lv~vDga~~~--a~~--- 774 (1016)
.|.+|+++|+++|+++ .+++++|++++|++ + |..- .++++|+++|+++|++++.|+|+.. +..
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~ 205 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKE 205 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhc
Confidence 3669999999999843 23589999999965 4 6653 3578899999999999999999652 111
Q ss_pred ---Cc--CCCCc------cCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCCCc
Q 001769 775 ---GL--TSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (1016)
Q Consensus 775 ---~l--~~pg~------~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g~i 842 (1016)
+. .++++ -..|.+++|+||.++.| -+|++++++ ++...+....+.. +.....|..
T Consensus 206 r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~------~GG~i~~~d~~l~~~~~~~~~~~-------~~~~~~gG~ 272 (431)
T cd00617 206 REEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN------IGGFLALRDDELYEEARQRVVLY-------EGFVTYGGM 272 (431)
T ss_pred ccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc------cceEEEeCcHHHHHHHHHhcccc-------CCccccccc
Confidence 11 11222 15899999999987543 357888886 4655442111100 000001111
Q ss_pred cCCccchhhHHHHHHH-HHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEecC
Q 001769 843 AAAPWGSALILPISYT-YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 843 ~s~~~G~a~~~~~a~a-~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~~~ 911 (1016)
......|.+ .|... .+ .+..+..+...+||.+.|++ ++++..|. + .|-+.++.+.
T Consensus 273 -------~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~G~~v~~P~--G--gh~v~~d~~~ 329 (431)
T cd00617 273 -------AGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEAGVPIVEPA--G--GHAVFIDARE 329 (431)
T ss_pred -------cHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHCCCCccCCC--c--ceEEEEEhHH
Confidence 111111222 22211 11 13345556677999999987 77877652 2 2556677663
No 399
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.32 E-value=4.1e-11 Score=120.91 Aligned_cols=150 Identities=20% Similarity=0.181 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHH-HHHHHhhcCCCeEEEEeCch--
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTI-DICITRADGFDIKVVVSDLK-- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~-~~l~~~a~~~gi~v~~vd~~-- 289 (1016)
+.++++.++++++.+..++.++.++|.+++.+++++. +++++|++++..|++.. .. ++..|.+++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL---GPGDEVIVDANGHGSRYWVA----AELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC---CCCCEEEEeecccceehhhH----HHhcCCEEEEeccCCC
Confidence 4578899999996555568888999999998888874 25789999999999887 33 34568888887642
Q ss_pred --------hhhc--cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC----CCCcccceEEEe
Q 001769 290 --------DIDY--KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK----PPGELGADIVVG 354 (1016)
Q Consensus 290 --------~L~~--l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~----~pg~~GaDivvg 354 (1016)
+++. ..++++++++++| +..|.+.|+++|.++||++|++++++ ...+.+... .+...|+|++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D-~a~~~~~~~~~~~~~~~~~~d~~~~ 153 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVD-AASAGGASPAPGVLIPEGGADVVTF 153 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEe-cccccccccccccccccccCCEEEE
Confidence 2222 3567888999887 46789999999999999999999994 233333222 245678999999
Q ss_pred cC-ccccccCCCCCcceEEEEee
Q 001769 355 SA-QRFGVPMGYGGPHAAFLATS 376 (1016)
Q Consensus 355 s~-k~lg~P~g~GGP~~Gfl~~~ 376 (1016)
|. |.| |||++|++++|
T Consensus 154 s~~K~~------~~~~~G~l~~~ 170 (170)
T cd01494 154 SLHKNL------GGEGGGVVIVK 170 (170)
T ss_pred Eccccc------CCCceEEEEeC
Confidence 98 555 44778999875
No 400
>PRK09105 putative aminotransferase; Provisional
Probab=99.31 E-value=2.3e-10 Score=132.40 Aligned_cols=219 Identities=13% Similarity=0.128 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCC
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g 713 (1016)
..++++.+++.+|.+...+..+.|++. +..++++.+. +++++|+++++.|+.+...+++.|.+++.++.++++
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~--ai~~~~~~l~-----~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSE--PLNYAVLAFT-----SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHH--HHHHHHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCC
Confidence 346778888999988766666666542 3444444442 257899999998888888889999999999998888
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHH--cCcEEEEEccccccccCcCCCC---ccCCcE-
Q 001769 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGADV- 786 (1016)
Q Consensus 714 ~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~--~g~lv~vDga~~~a~~~l~~pg---~~GaDi- 786 (1016)
.+|++++++. . +++++|++++|| .+|.+. +.+++.++++. +|+++++|.+... +....... +.+.++
T Consensus 153 ~~d~~~l~~~-~---~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 153 AHDVKAMLAA-D---PNAGLIYICNPNNPTGTVT-PRADIEWLLANKPAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCHHHHHhc-C---CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCCCCcEEEEECchHH-hccCcchHHHHhhCCCEE
Confidence 8999999876 3 578899999995 689987 67777777653 4899999987621 11111111 123454
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
++.|++|+|++| |.++|++++++++.+.+-.. ....++ .....++.+++.. .+
T Consensus 227 ~~~SfSK~~g~~----GlRiG~~v~~~~~i~~l~~~---------------~~~~~~------~~~~~aa~~~L~~--~~ 279 (370)
T PRK09105 227 VLRTFSKLYGMA----GMRLGLAAARPDLLAKLARF---------------GHNPLP------VPAAAAGLASLRD--PK 279 (370)
T ss_pred EEecccHhhcCC----ccceeeeecCHHHHHHHHhc---------------CCCCcC------HHHHHHHHHHHhC--HH
Confidence 455889999654 56799999887665543110 001111 1122223333332 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 867 GLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
-+++..+....+.+++.+.|++ ++++
T Consensus 280 ~~~~~~~~~~~~r~~l~~~L~~~g~~~ 306 (370)
T PRK09105 280 LVPQRRAENAAVREDTIAWLKKKGYKC 306 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 3455556666777888888887 4444
No 401
>PLN00175 aminotransferase family protein; Provisional
Probab=99.31 E-value=1.1e-09 Score=128.73 Aligned_cols=260 Identities=13% Similarity=0.132 Sum_probs=166.4
Q ss_pred HHcCC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---------h
Q 001769 222 DLTGL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------K 289 (1016)
Q Consensus 222 ~L~G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~---------~ 289 (1016)
+..|. ++. ++.+++|++.+...++.++. ++||+|++++-.|+.+...++. .|.+++.+++ +
T Consensus 106 ~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~---~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~~~ 178 (413)
T PLN00175 106 KDTGLVVDPEKEVTVTSGCTEAIAATILGLI---NPGDEVILFAPFYDSYEATLSM----AGAKIKTVTLRPPDFAVPED 178 (413)
T ss_pred HHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC---CCCCEEEEeCCCchhHHHHHHH----cCCEEEEEECCcccCCCCHH
Confidence 33354 344 58888999988777666652 3799999999999988777653 5777776654 3
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC--------CCCcccceEEEecC
Q 001769 290 DIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK--------PPGELGADIVVGSA 356 (1016)
Q Consensus 290 ~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l~--------~pg~~GaDivvgs~ 356 (1016)
+|++ +.+++++|++.+| |.+|.+. ++++|+++|+++|++++++ +........ -++..+-.|+++|.
T Consensus 179 ~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~D-e~Y~~l~~~~~~~s~~~~~~~~~~vi~i~Sf 257 (413)
T PLN00175 179 ELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTD-EVYDKLAFEGDHISMASLPGMYERTVTMNSL 257 (413)
T ss_pred HHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe-cccCccccCCcccChhhCCCCcCcEEEEecc
Confidence 3555 6678999998888 6899886 5788999999999999984 322211110 11222345778886
Q ss_pred -ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHH
Q 001769 357 -QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1016)
Q Consensus 357 -k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~ 435 (1016)
|.|+.| |=-.|++.+.+++++.+- +.+.....|++......++.+ +
T Consensus 258 SK~~~~~----G~RiG~~v~~~~l~~~l~----------------------------~~~~~~~~~~s~~~Q~a~~~~-l 304 (413)
T PLN00175 258 GKTFSLT----GWKIGWAIAPPHLTWGVR----------------------------QAHSFLTFATATPMQWAAVAA-L 304 (413)
T ss_pred hhhccCc----chheeeeEeCHHHHHHHH----------------------------HHHhhccCCCCHHHHHHHHHH-H
Confidence 888643 223588888777665441 111112233333322222211 1
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEec---C--CHHHHHHHHH-HcCceeecc-----
Q 001769 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKC---A--DAHAIASAAY-KIEMNLRVV----- 502 (1016)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~---~--~~~~v~~~L~-~~GI~~~~~----- 502 (1016)
. .+..-++++.++..++.+++.+.|++.| +++..+ .+| +.++. + ...++++.|. ++||.+.+.
T Consensus 305 ~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~~f--~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~ 380 (413)
T PLN00175 305 R-APESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSSGTYF--VMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYL 380 (413)
T ss_pred h-CCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEE--EEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCC
Confidence 1 2233467788888889999999999987 876532 222 22332 1 2568888886 569976431
Q ss_pred ----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 ----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 ----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
..+.+|+++.. +++++++.++.|.
T Consensus 381 ~~~~~~~~iRls~~~--~~e~l~~~~~rL~ 408 (413)
T PLN00175 381 NPEDGKNLVRFAFCK--DEETLRAAVERMK 408 (413)
T ss_pred CCCCCCCEEEEEEcC--CHHHHHHHHHHHH
Confidence 13589999983 6888888888775
No 402
>PRK07683 aminotransferase A; Validated
Probab=99.31 E-value=2.6e-10 Score=132.61 Aligned_cols=262 Identities=14% Similarity=0.170 Sum_probs=158.1
Q ss_pred cccccccccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCCh-HHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAG 664 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sG-a~ae~a~ 664 (1016)
.++.|+.+.+.+++...........+.+ +..|.| .+|..++..++.+++.+..|.. .. .+..++| +++.
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al--- 102 (387)
T PRK07683 29 NLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTH---NAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAI--- 102 (387)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH---
Confidence 4577888776655432221111111111 122333 3676666767777776655653 33 4444445 4443
Q ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 665 LMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 665 l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~-g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
.++++.+. .++++|+++.+.+..+...+...|++++.++.+.+ ..+|+++++++++ +++++|++.+|+ .+
T Consensus 103 ~~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NPt 174 (387)
T PRK07683 103 DIAFRTIL-----EPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT---EKTRCVVLPYPSNPT 174 (387)
T ss_pred HHHHHHhC-----CCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC---cCceEEEEeCCCCCC
Confidence 33333321 25689999998777777778899999999998765 4679999999987 688999999985 68
Q ss_pred cccc--ccHHHHHHHHHHcCcEEEEEccccccc-cCcCCC-C----ccCCcEEEeCccccccCCCCCCCCeEEEEEEccc
Q 001769 743 GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTSP-G----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 814 (1016)
Q Consensus 743 G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~l~~p-g----~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~ 814 (1016)
|.+. .++++|+++|+++|+++++|.+...-. ..-..+ . ..+-.+++.|++|.|++| |-.+|++++.++
T Consensus 175 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~ 250 (387)
T PRK07683 175 GVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMT----GWRIGFLFAPSY 250 (387)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCc----cceeEEEEcCHH
Confidence 8874 258999999999999999998753111 110001 1 112347788999999765 567999999877
Q ss_pred ccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 815 LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 815 l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+.+.+-.. ......+.+. ....++..+|. .|..-+++..+....+.+++.+.|++
T Consensus 251 l~~~~~~~--------------~~~~~~~~~~----~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (387)
T PRK07683 251 LAKHILKV--------------HQYNVTCASS----ISQYAALEALT-AGKDDAKMMRHQYKKRRDYVYNRLIS 305 (387)
T ss_pred HHHHHHHH--------------HHhccCCCCh----HHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543110 0000111111 11122223332 23333445555666778888888876
No 403
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.31 E-value=1.1e-09 Score=126.76 Aligned_cols=296 Identities=16% Similarity=0.152 Sum_probs=180.5
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
+.|..+...|+.+.+.+.+.......|.+. +|. ++++.+|+++|.+..++.+.+|++.++..++.++.
T Consensus 42 ~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~-----~g~-----~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~-- 109 (371)
T PRK05166 42 GSNENPLGPSPAVRRAFADIAELLRLYPDP-----QGR-----ALREAIAARTGVPADRIILGNGSEDLIAVICRAVL-- 109 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-----cHH-----HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc--
Confidence 444434445555554544322223345432 331 46678999999988899999999877766655542
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------hhhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~--------~~L~~-l~~~t~~V~v~~p-n~~G~i~dl~eI~~l 321 (1016)
++||+|+++.-.|+.....+ +..|++++.++. +++++ +++++++|++.+| |.+|.+.|.+++.++
T Consensus 110 -~~gd~vli~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l 184 (371)
T PRK05166 110 -RPGDRVVTLYPSFPLHEDYP----TMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARV 184 (371)
T ss_pred -CCCCEEEEcCCChHHHHHHH----HHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 37899999998888776554 346888887655 33444 6677888989988 689999987777776
Q ss_pred HHh--CCcEEEEEeccccccCCCC--CC------ccc-ceEEEecC-ccccccCCCCCcceEEEEe-ehhhhhcCCCceE
Q 001769 322 AHA--NGVKVVMATDLLALTILKP--PG------ELG-ADIVVGSA-QRFGVPMGYGGPHAAFLAT-SQEYKRMMPGRIV 388 (1016)
Q Consensus 322 ah~--~GalviV~a~~~alg~l~~--pg------~~G-aDivvgs~-k~lg~P~g~GGP~~Gfl~~-~~~l~~~lpgriv 388 (1016)
++. .+++++++ +....-.... +. +.+ --|+++|. |.|+.| |--.||+.+ .+++.+.+-
T Consensus 185 ~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~----GlRiG~~i~~~~~l~~~~~---- 255 (371)
T PRK05166 185 LDATPPETLIVVD-EAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLA----GLRVGYGLVSDPELVGLLD---- 255 (371)
T ss_pred HHhCCCCcEEEEE-CcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcc----hhheeeeecCCHHHHHHHH----
Confidence 664 37787773 3322111110 10 111 12667776 888643 445788766 455544430
Q ss_pred eeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 001769 389 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1016)
Q Consensus 389 G~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~ 468 (1016)
+-+...++ +......+.+ .+...+-+++..+...++.+++.+.|++.| ++
T Consensus 256 ------------------------~~~~~~~~--~~~~q~~~~~---~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~ 305 (371)
T PRK05166 256 ------------------------RVRTPFNV--NGAAQAAALA---ALDDEEHLAKGVALALAERERLKKELAEMG-YR 305 (371)
T ss_pred ------------------------HhccCCCC--CHHHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-Ce
Confidence 00111122 1111111111 222233456666677777788999999887 76
Q ss_pred EcCC-CCccEEEEecCC-HHHHHHHHHHcCceeecc----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 469 VQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 469 l~~~-~~~~~v~i~~~~-~~~v~~~L~~~GI~~~~~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+..+ ..| +.++.+. ..++.+.|.++||.+... ..+.+|++++ +.++.++|+++|.
T Consensus 306 ~~p~~g~f--l~~~~~~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~ 366 (371)
T PRK05166 306 IAPSRANF--LFFDARRPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALD 366 (371)
T ss_pred eCCCcCCE--EEEeCCCCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHH
Confidence 5432 222 3445544 788999999999988653 2578999998 5677777777774
No 404
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.31 E-value=5.3e-10 Score=130.57 Aligned_cols=276 Identities=17% Similarity=0.144 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHh-ccc--c--CCCCEEE-EcCCCCHHHHHHHHHhhc-----C--
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQ--K--GKKKTFI-IASNCHPQTIDICITRAD-----G-- 278 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~-~~~--~--~~gd~Vl-vs~~~Hps~~~~l~~~a~-----~-- 278 (1016)
...++.+.++++++.+ .+.++++|+.++|+++... .++ + .++++|| .+...|.++...+..-.. .
T Consensus 78 ~~~~la~~L~~~~~~~--~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~ 155 (397)
T TIGR03246 78 PVLRLAKKLVDATFAD--KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFA 155 (397)
T ss_pred HHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCC
Confidence 3456788999998765 4888899999999876543 332 0 1344555 566788887765532100 0
Q ss_pred ---CCeE-EEEeCchhhhc-cCCCEeEEEEEcCC-CCeee----ccHHHHHHHHHhCCcEEEEEeccc-cccCCCC---C
Q 001769 279 ---FDIK-VVVSDLKDIDY-KSGDVCGVLVQYPG-TEGEV----LDYGDFIKNAHANGVKVVMATDLL-ALTILKP---P 344 (1016)
Q Consensus 279 ---~gi~-v~~vd~~~L~~-l~~~t~~V~v~~pn-~~G~i----~dl~eI~~lah~~GalviV~a~~~-alg~l~~---p 344 (1016)
.++. +.+.|++++++ +.+++++|++..++ +.|.+ ..+++|.++|+++|++++++ +.+ ++|-... .
T Consensus 156 ~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D-Ev~tG~Gr~G~~~a~ 234 (397)
T TIGR03246 156 PLPGGIKHAPYNDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFD-EVQTGVGRTGELYAY 234 (397)
T ss_pred CCCCceEEeCCCCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-chhhcCCccccchhh
Confidence 1221 22235567777 77788888887543 55644 35999999999999999983 443 2221111 1
Q ss_pred Cccc--ceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 345 GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 345 g~~G--aDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
..+| .|+++ -+|.++ .|=| .|.+.+++++.+.+... . ...|. +.
T Consensus 235 ~~~gv~pDi~t-~~K~lg----gG~p-igav~~~~~i~~~~~~~----------~----------------~~~t~--~~ 280 (397)
T TIGR03246 235 MHYGVTPDILT-SAKALG----GGFP-IGAMLTTTEIAAHLKVG----------T----------------HGTTY--GG 280 (397)
T ss_pred hhcCCCCCEEE-eehhhh----CCcc-eeEEEEcHHHHHhccCC----------C----------------cCCCC--CC
Confidence 1233 47653 257774 1223 45666787776655210 0 00111 11
Q ss_pred hhHHH-HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC-eEEcC----CCCccEEEEec--CC-HHHHHHHHH
Q 001769 423 AQALL-ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT-VEVQG----LPFFDTVKVKC--AD-AHAIASAAY 493 (1016)
Q Consensus 423 ~~~l~-a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~-~~l~~----~~~~~~v~i~~--~~-~~~v~~~L~ 493 (1016)
+.... +..++ +..+.. +++.++..++.++|+++|++++. +.++. ...+-.+.+.. .. +.++.+.|.
T Consensus 281 ~p~~~aaa~a~--l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~ 355 (397)
T TIGR03246 281 NPLACAVAGKV--LDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAA 355 (397)
T ss_pred CHHHHHHHHHH--HHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHH
Confidence 12111 12222 233322 34677888889999999988641 11111 11111122211 12 678999999
Q ss_pred HcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 494 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 494 ~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++|+.+....++.+|++++..+|++||++++++|..
T Consensus 356 ~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 356 EEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFER 391 (397)
T ss_pred HCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 999998765567899999999999999999999853
No 405
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.31 E-value=4.1e-10 Score=131.64 Aligned_cols=276 Identities=16% Similarity=0.175 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhc-cc-c-----CCCCEEEEcCCC-CHHHHHHHHHhh-----c
Q 001769 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ-K-----GKKKTFIIASNC-HPQTIDICITRA-----D 277 (1016)
Q Consensus 211 e~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~-~~-~-----~~gd~Vlvs~~~-Hps~~~~l~~~a-----~ 277 (1016)
+...++++.+++++|.+. +.++++|+.++|+++...+ ++ + ..+++|+..+.. |.+++..+..-- .
T Consensus 79 ~~~~~l~~~l~~~~~~~~--~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYDK--VLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred HHHHHHHHHHHhhcCCCE--EEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 345677889999998764 7788999999998765432 21 0 135677777766 556666654210 0
Q ss_pred CCC------eEEEEeCchhhhc-cC---CCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEeccc-cccCC
Q 001769 278 GFD------IKVVVSDLKDIDY-KS---GDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLL-ALTIL 341 (1016)
Q Consensus 278 ~~g------i~v~~vd~~~L~~-l~---~~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~-alg~l 341 (1016)
.++ ..+.+.|+++|++ +. +++++|++..+ ++.|.+.+ +++|.++|+++|++++++ +.+ ++|--
T Consensus 157 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D-Ev~~g~g~~ 235 (401)
T TIGR01885 157 NFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIAD-EIQTGLGRT 235 (401)
T ss_pred ccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-chhhCCCcc
Confidence 111 2233345667766 52 56777777643 67798886 999999999999999983 332 33311
Q ss_pred CCC-----CcccceEEEecCccccccCCCCC-cceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccc
Q 001769 342 KPP-----GELGADIVVGSAQRFGVPMGYGG-PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK 415 (1016)
Q Consensus 342 ~~p-----g~~GaDivvgs~k~lg~P~g~GG-P~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRek 415 (1016)
... ..+..|+++. +|.|++ || | .|++..++++.+.+... .. .
T Consensus 236 G~~~~~~~~~~~~di~~~-gK~l~~----g~~~-ig~v~~~~~i~~~~~~~----------~~----------------~ 283 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVLL-GKALSG----GVYP-VSAVLADDDVMLTIKPG----------EH----------------G 283 (401)
T ss_pred chhhHHhhcCCCCCEEEe-eccccC----CCCC-cEEEEEcHHHHhhccCC----------CC----------------C
Confidence 111 1245687764 387752 32 3 46677777777655210 00 0
Q ss_pred cCCccchh-hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC----CCCccEEEEecC----CHH
Q 001769 416 ATSNICTA-QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG----LPFFDTVKVKCA----DAH 486 (1016)
Q Consensus 416 aTsnicT~-~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~----~~~~~~v~i~~~----~~~ 486 (1016)
.| .+.+ ....+..++ +..+..++ +.++..++++++++.|++++ ..++. ...+..+.+..+ .+.
T Consensus 284 ~t--~~~~p~~~~aa~a~--L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~ 355 (401)
T TIGR01885 284 ST--YGGNPLACAVAVAA--LEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESKTGRTAW 355 (401)
T ss_pred CC--CCCCHHHHHHHHHH--HHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCcchhHHH
Confidence 01 1111 122222222 23333333 45677888999999999885 33321 122223344433 167
Q ss_pred HHHHHHHHcCceeecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 487 AIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 487 ~v~~~L~~~GI~~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
++.+.|.++||.+....++.+|++++..+|++||++++++|..
T Consensus 356 ~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~ 398 (401)
T TIGR01885 356 DLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKK 398 (401)
T ss_pred HHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 8999999999998766668899999999999999999999863
No 406
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.31 E-value=5.2e-11 Score=136.67 Aligned_cols=269 Identities=18% Similarity=0.221 Sum_probs=162.0
Q ss_pred ccccccccCCCC----hhhhhccccc---ccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCce-eeecCChHHH
Q 001769 591 MIPLGSCTMKLN----ATTEMMPVTW---PSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSF-SLQPNAGAAG 660 (1016)
Q Consensus 591 ~i~LGs~t~~~~----~~~~~~~~~~---~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G--~~~~-~l~~~sGa~a 660 (1016)
+|.||+|.+... +..+...... ......+-|.| .+|..++.+.+.+++.+-.| .+.. .++.++|++.
T Consensus 3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPP---PQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTC---TTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred EEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCC---chhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 577888776665 2211111111 11111344444 56766555444444443333 4444 6778888764
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC--CCCCCCHHHHHHHHHcCC-C--CEEEEE
Q 001769 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--AKGNINIEELRKAAEANR-D--NLSTLM 735 (1016)
Q Consensus 661 e~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d--~~g~iD~~~L~~~i~~~~-~--~t~~v~ 735 (1016)
....+..+. . . .+++.|+++.+.|..+...++..|++++.++++ .++.+|+++|++.+++.. + ++++|+
T Consensus 80 ~~~~~~~~~---~--~-~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~ 153 (363)
T PF00155_consen 80 ALFLLLRLL---K--I-NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVL 153 (363)
T ss_dssp HHHHHHHHH---H--S-STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEE
T ss_pred chhhhhhcc---c--c-cccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceee
Confidence 322222221 1 1 256789999999988888899999999999965 567899999999998421 1 578999
Q ss_pred EEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccccCcC-----CC-CccCCc-EEEeCccccccCCCCCCCCe
Q 001769 736 VTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLT-----SP-GYIGAD-VCHLNLHKTFCIPHGGGGPG 805 (1016)
Q Consensus 736 i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~l~-----~p-g~~GaD-i~~~s~hK~~~~phg~GGPg 805 (1016)
+++|+ .+|..- .++++|+++|+++|+++++|.++.....+-. .. .+.+.+ +++.|++|.|+.| |..
T Consensus 154 ~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlR 229 (363)
T PF00155_consen 154 ICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLP----GLR 229 (363)
T ss_dssp EESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSG----GGT
T ss_pred ecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecccccccc----ccc
Confidence 99995 688765 3567777779999999999977532211100 00 122334 7888999998654 456
Q ss_pred EEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhCh--hhHHHHHHHHHHHHHHHH
Q 001769 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS--KGLTEASKIAILNANYMA 883 (1016)
Q Consensus 806 ~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~--eGl~~~~~~~~~nA~yla 883 (1016)
+|++++++++.+.+..... . ...+ ......+...+..-+. +=++++.+....+.+++.
T Consensus 230 vG~i~~~~~~~~~l~~~~~------------~--~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~ 289 (363)
T PF00155_consen 230 VGYIVAPPELIERLRRFQR------------S--GLSS------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLR 289 (363)
T ss_dssp EEEEEEEHHHHHHHHHHHH------------H--TTSS------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhhhccc------------c--cccc------chhhHHHHHhhhcccccccccccchhhHHHHHHHHH
Confidence 8999998766654421100 0 0111 1122222333333322 146677888888999999
Q ss_pred HHHhc-cCCc
Q 001769 884 KRLEK-HYPI 892 (1016)
Q Consensus 884 ~~L~~-~~~v 892 (1016)
+.|++ ++.+
T Consensus 290 ~~L~~~~~~~ 299 (363)
T PF00155_consen 290 EALEEIGITV 299 (363)
T ss_dssp HHHHHTTSEE
T ss_pred HHHHHhhhhe
Confidence 99977 4443
No 407
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.31 E-value=4.2e-10 Score=131.31 Aligned_cols=211 Identities=18% Similarity=0.211 Sum_probs=139.4
Q ss_pred HHHHHHHHHHhCCC--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCc----------
Q 001769 635 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM---------- 702 (1016)
Q Consensus 635 ~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~---------- 702 (1016)
.++.+++++++|.+ ...++.+||+++.++++.+++.+ | +.+.|.+..+.||.........|.
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~----g--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 161 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT----G--RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPL 161 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH----C--CCeEEEECCCcCCccHHHHhccCCcccccCCCCC
Confidence 37888999998854 24577788988887777766542 2 223344445778776554433332
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCcccccc---HHHHHHHHHHcCcEEEEEcccccccc--
Q 001769 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV-- 774 (1016)
Q Consensus 703 --~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~-- 774 (1016)
++..+|. .|+++++++++ +++++|+++.+ |.+|.+.++ +++|.++|+++|+++++|.+++ +++
T Consensus 162 ~~~~~~~~~-----~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~ 232 (398)
T PRK03244 162 PGGVEHVPY-----GDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-GIGRT 232 (398)
T ss_pred CCCceEeCC-----CCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCccc
Confidence 3344443 48999999986 78999999987 567887633 8999999999999999998874 221
Q ss_pred C--cC-CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 775 G--LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 775 ~--l~-~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
+ +. .......|++++ .|+|+ ||-.+|++++++++.+.+.... ..+++.++..
T Consensus 233 g~~~~~~~~~~~pDi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~------------------~~~t~~~~~~ 287 (398)
T PRK03244 233 GAWFAHQHDGVTPDVVTL--AKGLG-----GGLPIGACLAFGPAADLLTPGL------------------HGSTFGGNPV 287 (398)
T ss_pred chHHhhhhhCCCCCEEEE--chhhh-----CCcccEEEEEcHHHHhhccCCC------------------CcCCCCCCHH
Confidence 1 00 011234788766 59885 3345788888877665442100 0112344667
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.+.++.++|..+..+.+ .++...+.+++.+.|++
T Consensus 288 ~~aaa~a~l~~~~~~~~---~~~~~~~~~~l~~~L~~ 321 (398)
T PRK03244 288 ACAAALAVLDTIASEGL---LENAERLGEQLRAGIEA 321 (398)
T ss_pred HHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHh
Confidence 77888888887765544 45666778889999986
No 408
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.31 E-value=4.6e-10 Score=130.11 Aligned_cols=284 Identities=16% Similarity=0.089 Sum_probs=170.3
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----- 288 (1016)
.++++.+++++|.+ ++.+++|||++...++.++.. ++||+|+++...|+++...++. .|++++.+|.
T Consensus 34 ~~~e~~la~~~g~~--~~v~~~sgt~al~~~l~~~~~--~~Gd~Viv~~~t~~~~~~~~~~----~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 34 RRCQQWLEQRFGSA--KVLLTPSCTAALEMAALLLDI--QPGDEVIMPSYTFVSTANAFVL----RGAKIVFVDIRPDTM 105 (375)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHhCC--CCCCEEEECCCCcHHHHHHHHH----cCCEEEEEecCCCcC
Confidence 44667888999886 488899999888776555433 3799999999999999888753 4888887654
Q ss_pred ----hhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-C--CCCcccceEEEecC---c
Q 001769 289 ----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-K--PPGELGADIVVGSA---Q 357 (1016)
Q Consensus 289 ----~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l-~--~pg~~GaDivvgs~---k 357 (1016)
+++++ +++++++|++.+ ++|...|+++|.++|+++|++++++ +.++++.. . +.+.+ .|+.++|. |
T Consensus 106 ~~d~~~le~~i~~~tk~i~~~~--~~G~~~~~~~i~~la~~~~i~vIeD-~a~a~g~~~~~~~~g~~-~~~~~~Sf~~~K 181 (375)
T PRK11706 106 NIDETLIEAAITPKTRAIVPVH--YAGVACEMDTIMALAKKHNLFVVED-AAQGVMSTYKGRALGTI-GHIGCFSFHETK 181 (375)
T ss_pred CcCHHHHHHhcCCCCeEEEEeC--CCCCccCHHHHHHHHHHcCCEEEEE-CccccccccCCeeeecC-cCEEEEeCCCCc
Confidence 34665 677899988775 5899999999999999999999984 45555542 1 12333 48888774 6
Q ss_pred cccccCCCCCcceEEEEeehhhhhcCCC-ceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATSQEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~~~l~~~lpg-rivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~ 436 (1016)
.++. |.| ++++..++++.+++.. +-.|...+ .+.. ...+...-..-|++. -+..+.|++-+.
T Consensus 182 ~l~~--g~g---G~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~--~~~~~~~~~~~g~~~-----~~~~~~aa~~~~ 244 (375)
T PRK11706 182 NYTA--GEG---GALLINDPALIERAEIIREKGTNRS-----QFFR--GQVDKYTWVDIGSSY-----LPSELQAAYLWA 244 (375)
T ss_pred cccc--cCC---eEEEECCHHHHHHHHHHHHcCCCcc-----hhhc--cCCCcceeeeccccc-----CcCHHHHHHHHH
Confidence 5632 333 2455445566544311 11111000 0000 000000000112221 111223333222
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCC---CeEEcCCC-----CccEEEEecC--C-HHHHHHHHHHcCceeecc---
Q 001769 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQGLP-----FFDTVKVKCA--D-AHAIASAAYKIEMNLRVV--- 502 (1016)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G---~~~l~~~~-----~~~~v~i~~~--~-~~~v~~~L~~~GI~~~~~--- 502 (1016)
.+ +-++++.++-.++++++.+.|.++. ++.+...+ ....+.+.++ . ..++.+.|.++||..+..
T Consensus 245 ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p 322 (375)
T PRK11706 245 QL--EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVFHYIP 322 (375)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCCccccCCc
Confidence 22 2366777777888899999998763 23332111 1112334333 2 789999999999964210
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 -----------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 -----------------------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
....+.+-++..-|++|++.++++|.
T Consensus 323 ~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 371 (375)
T PRK11706 323 LHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTIL 371 (375)
T ss_pred cCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHH
Confidence 02335666666677888888887775
No 409
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.31 E-value=8.5e-11 Score=137.54 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC
Q 001769 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (1016)
Q Consensus 631 ~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d 710 (1016)
.+...++++.|++++|.+. .+++++|++++.+++.++..+ .+++.|+.....|++....+...|.++..++.
T Consensus 90 ~~~~~~l~~~la~~~g~~~-~~~~~sG~~an~~ai~~l~~~------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~- 161 (407)
T PRK09064 90 NHYHVELERELADLHGKEA-ALVFTSGYVSNDATLSTLAKL------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH- 161 (407)
T ss_pred HHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHHHHHHhCC------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-
Confidence 3456789999999999654 466788877665555544321 13455555556676665556677888766664
Q ss_pred CCCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcC------CCC-c
Q 001769 711 AKGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-Y 781 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~-~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~------~pg-~ 781 (1016)
.|++++++.++... +++++|++++|+ ..|.+. |+++|.++|+++|+++++|.++..+..+-. ..+ .
T Consensus 162 ----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~ 236 (407)
T PRK09064 162 ----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM 236 (407)
T ss_pred ----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC
Confidence 48899999886432 468999999985 678887 899999999999999999999864321100 011 1
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHH
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~ 861 (1016)
...|+++.+++|.|+.+ | |++++++++.+.+.... ....... + ++...+..+.+.+.
T Consensus 237 ~~~div~~t~sKa~g~~------G-G~~~~~~~~~~~l~~~~-----------~~~~~t~-~----~~~~~~~aa~~al~ 293 (407)
T PRK09064 237 DRIDIIEGTLAKAFGVM------G-GYIAGSAALVDAVRSYA-----------PGFIFTT-S----LPPAIAAAALASIR 293 (407)
T ss_pred CCCeEEEEecchhhhcc------C-ceEecCHHHHHHHHHhC-----------ccccccC-c----CCHHHHHHHHHHHH
Confidence 24689988999999532 2 67777776555431100 0000000 1 12223334445555
Q ss_pred HhChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 862 MMGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 862 ~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
.+-..+ ...++...+++++.++|++ ++++
T Consensus 294 ~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~ 323 (407)
T PRK09064 294 HLKESN--EERERHQERAAKLKAALDAAGIPV 323 (407)
T ss_pred HHhcCH--HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 554332 3356778899999999987 4554
No 410
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.31 E-value=3e-10 Score=133.81 Aligned_cols=264 Identities=14% Similarity=0.162 Sum_probs=162.1
Q ss_pred ccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCceeeecCChHHHHHHHHHHH
Q 001769 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVI 668 (1016)
Q Consensus 591 ~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G--~~~~~l~~~sGa~ae~a~l~ai 668 (1016)
...||++.+.+..+...+..... +....-+.. +...++.+.|++++. ++. .++.+||+++++++++.+
T Consensus 53 ~~~lGh~~p~v~~ai~~q~~~~~-~~~~~~~~~--------~~~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~A~kla 122 (423)
T PRK05964 53 VATHGHNHPYIDQAIREQLDRLD-HVIFAGFTH--------EPAERLAQRLVALTPGGLDH-VFFSDSGSVAVEVALKMA 122 (423)
T ss_pred hccCCCCCHHHHHHHHHHHhhCC-CccccccCC--------HHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHH
Confidence 34678887666665555432221 111000111 223467888888884 443 466899999999999999
Q ss_pred HHHHHhcCCCCCCEEEE-cCCCccccHHHHHhCC------------cEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEE
Q 001769 669 RAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------------MKIVSVGTDAK--GNINIEELRKAAEANRDNLST 733 (1016)
Q Consensus 669 r~~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G------------~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~ 733 (1016)
|.|...+|..+|.+||. ..+.||.........+ ..+..+++..+ ...+++++++.+.++.+++++
T Consensus 123 r~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaa 202 (423)
T PRK05964 123 LQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAA 202 (423)
T ss_pred HHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEE
Confidence 99876565434555554 6788886544332111 12334444321 112388999999765578999
Q ss_pred EEEEc-C-CCCcccc---ccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc--------cCCcEEEeCccccccCCCC
Q 001769 734 LMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHG 800 (1016)
Q Consensus 734 v~i~~-P-n~~G~i~---~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~--------~GaDi~~~s~hK~~~~phg 800 (1016)
|+++. . ...|+.. ..+++|.++|++||+++++|.+++ ++.++|. ..+|++++ .|+|+
T Consensus 203 vi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t----g~gr~G~~~a~~~~~v~pDi~~~--~K~l~---- 272 (423)
T PRK05964 203 FIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT----GFGRTGTLFACEQAGVSPDIMCL--SKGLT---- 272 (423)
T ss_pred EEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh----CCCcCcchhHHHhcCCCCCeeee--ehhhh----
Confidence 98875 2 3456544 248999999999999999998764 2223322 24788766 49884
Q ss_pred CCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 001769 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1016)
Q Consensus 801 ~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~ 880 (1016)
+|+-.+|.+++++++.+.+...... .. ....+++.|++..++++.+.|..+-.+++ .++...+.+
T Consensus 273 gG~~p~~av~~~~~i~~~~~~~~~~-----------~~-~~~~~T~~~np~~~aaa~a~l~~l~~~~~---~~~~~~~g~ 337 (423)
T PRK05964 273 GGYLPLAATLCTAEIFEAFYSDDRA-----------KA-FMHSPSYTANPLACAAANASLDLFEDEPV---LERVAALSA 337 (423)
T ss_pred cCcccceEEEEcHHHHHhhhcCCcc-----------cc-cccCCCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 3323366788888776655311000 00 00112355677778888888887765544 567778889
Q ss_pred HHHHHHhcc
Q 001769 881 YMAKRLEKH 889 (1016)
Q Consensus 881 yla~~L~~~ 889 (1016)
++.++|++.
T Consensus 338 ~l~~~l~~l 346 (423)
T PRK05964 338 GLAEGLEPF 346 (423)
T ss_pred HHHHHHHhh
Confidence 999988763
No 411
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.30 E-value=7.5e-10 Score=128.32 Aligned_cols=282 Identities=18% Similarity=0.116 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
..++++.+++++|.+. +.+++|||++...++.++.. ++||+||++...|+++...+.. .|++++.+|++
T Consensus 33 ~~~~e~~la~~~g~~~--~v~~~sgt~aL~~~l~al~~--~pGd~Viv~~~t~~~~~~~~~~----~G~~~v~vd~d~~~ 104 (376)
T TIGR02379 33 SRRCETWLENRTGTKK--ALLTPSCTAALEMAALLLDI--QPGDEVIMPSYTFVSTANAFVL----RGAKIVFVDIRPDT 104 (376)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHcCC--CCcCEEEECCCCcHHHHHHHHH----cCCEEEEEecCCCc
Confidence 3456688889888764 88899999988877766644 3899999999999999888743 48888887653
Q ss_pred ------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccC-CC--CCCcccceEEEecC---
Q 001769 290 ------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI-LK--PPGELGADIVVGSA--- 356 (1016)
Q Consensus 290 ------~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~-l~--~pg~~GaDivvgs~--- 356 (1016)
++++ ++++|++|++.+| +|...|+++|.++|+++|++++++ ...+++. .. +.+.+| |+.++|.
T Consensus 105 ~~~d~~~le~~i~~~tk~Iip~~~--~G~~~d~~~I~~la~~~~i~vIeD-aa~~~g~~~~~~~~g~~~-~~~~fSf~~~ 180 (376)
T TIGR02379 105 MNIDETLIESAITHRTKAIVPVHY--AGVACDMDTIMALANKHQLFVIED-AAQGVMSTYKGRALGSIG-HLGTFSFHET 180 (376)
T ss_pred CCCCHHHHHHhcCcCceEEEEeCC--CCCccCHHHHHHHHHHCCCEEEEE-CccccCCccCCcccCCCC-CEEEEeCCCC
Confidence 3555 6778999887664 699999999999999999999994 3445543 21 223332 7878885
Q ss_pred ccccccCCCCCcceEEEEee-hhhhhcCCCc-eEeeeecCC--CC-cceeeecccccccccccccCCccchhhHHHHHHH
Q 001769 357 QRFGVPMGYGGPHAAFLATS-QEYKRMMPGR-IVGVSIDSS--GK-PALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (1016)
Q Consensus 357 k~lg~P~g~GGP~~Gfl~~~-~~l~~~lpgr-ivG~s~d~~--g~-~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~A 431 (1016)
|.+. .||. .|++.++ +++.+++... -.|...+.. +. ..|.. ...|+..- +.-+.|
T Consensus 181 K~l~----~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~g~n~~-----~~~~~A 240 (376)
T TIGR02379 181 KNYT----SGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTW----------RDIGSSYL-----PSELQA 240 (376)
T ss_pred CcCc----ccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCccee----------eeecccCC-----ccHHHH
Confidence 5442 3333 3555554 6666555211 112111000 00 00000 01121111 111123
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC---CeEEcC-C-C---CccEEEEecCC---HHHHHHHHHHcCceee
Q 001769 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVEVQG-L-P---FFDTVKVKCAD---AHAIASAAYKIEMNLR 500 (1016)
Q Consensus 432 a~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G---~~~l~~-~-~---~~~~v~i~~~~---~~~v~~~L~~~GI~~~ 500 (1016)
++-+..+ +-++++.++-.+++++..+.|.++. ..++.. . . ...-+.+.++. -.++.+.|.++||..+
T Consensus 241 a~g~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~~~ 318 (376)
T TIGR02379 241 AYLWAQL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLKEQEIMAV 318 (376)
T ss_pred HHHHHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHHHCCCCcc
Confidence 3211222 2355666666777788888887642 122221 1 1 11124444432 6789999999999653
Q ss_pred cc--------------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 501 VV--------------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 501 ~~--------------------------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.. ....+.+-++..-|++|++.+++++.
T Consensus 319 ~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~ 372 (376)
T TIGR02379 319 FHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTIC 372 (376)
T ss_pred ccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHH
Confidence 10 01346666777788888888888875
No 412
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.30 E-value=1.8e-10 Score=132.32 Aligned_cols=250 Identities=14% Similarity=0.129 Sum_probs=156.3
Q ss_pred cccccccccCCCChhhhhccc-----ccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCce-eeecCChHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPV-----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYA 663 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~-----~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~-~l~~~sGa~ae~a 663 (1016)
.++.|+.+...+++..+.... ....+..| | + +|. .++++.+++.+|.+.. .+..++|++. +
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~--~----~~~----~~lr~~ia~~~~~~~~~~I~~t~G~~~--~ 93 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRY-P--D----PRA----AALKAALRAAMGVPAGADVLLGNGSDE--L 93 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccC-C--C----CCH----HHHHHHHHHHhCcCCCCcEEEcCCHHH--H
Confidence 467788887776554333221 11122223 2 1 232 3677888889898642 5666667642 2
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 664 GLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 664 ~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
..++++.+. .++++|+++.+.|..+...++..|++++.+++++++.+|+++++++++. .++++|++++|+ .+
T Consensus 94 i~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt 166 (356)
T PRK04870 94 IQLLALACA-----KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHHHhc-----CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence 223333321 3578999999877767677889999999999988888999999999962 478999999985 68
Q ss_pred ccccccHHHHHHHHHHcCcEEEEEccccccccC--cC-CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 743 GVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 743 G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~--l~-~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
|.+. +.+++.++++..++++++|.+.. .+.. .. ......--+++.|++| +++| |..+|++++++++.+.+
T Consensus 167 G~~~-~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~----GlRiG~~i~~~~~i~~~ 239 (356)
T PRK04870 167 GNLF-DDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLPRLARFPNLLVMRTVSK-LGLA----GLRLGYLAGHPAWIAEL 239 (356)
T ss_pred CCCC-CHHHHHHHHHHCCCEEEEECCch-hhcCcchHHHHhhCCCEEEEecchh-hhhH----HHhhhhhhCCHHHHHHH
Confidence 9997 78888888877789999998752 1111 00 0112222367778999 6543 56699999887665443
Q ss_pred CCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 820 PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 820 pg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
... ....+++ . ....++...+.. .+-+++..++...+..++.+.|++
T Consensus 240 ~~~--------------~~~~~~~--~----~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~ 286 (356)
T PRK04870 240 DKV--------------RPPYNVN--V----LTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAA 286 (356)
T ss_pred HHc--------------cCCCcCC--H----HHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 210 0001111 1 111222233332 233666677777888888888876
No 413
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.30 E-value=1.9e-09 Score=126.24 Aligned_cols=273 Identities=13% Similarity=0.105 Sum_probs=168.5
Q ss_pred hHHHHHHHHHHHHHHHcCC--CC-ccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001769 208 GRLESLLNFQTMIADLTGL--PM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1016)
Q Consensus 208 G~le~i~e~q~~iA~L~G~--~~-anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~ 284 (1016)
|..+.-..+.+.+++..|. ++ .++.+++|++.++..++.++. ++||+|+++.-.|+.+...++ ..|.+++
T Consensus 79 G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~---~~Gd~Vlv~~P~y~~~~~~~~----~~g~~v~ 151 (405)
T PRK06207 79 GDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATV---ARGDKVAIVQPDYFANRKLVE----FFEGEMV 151 (405)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc---CCCCEEEEeCCCchhHHHHHH----HcCCEEE
Confidence 4333333344566666685 44 679899999988877776653 379999999999998777654 3466666
Q ss_pred EeCc-------------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCC-----
Q 001769 285 VSDL-------------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----- 341 (1016)
Q Consensus 285 ~vd~-------------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l----- 341 (1016)
.+++ ++|++ +++++++|++.+| |.+|.+.+ +++|+++|+++|+++++| +..+.-..
T Consensus 152 ~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~D-e~Y~~~~~~~~~~ 230 (405)
T PRK06207 152 PVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVD-QLYSRLLYDGTSY 230 (405)
T ss_pred EEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-ccccccccCCCCC
Confidence 5543 33544 5667888989998 68999876 788999999999999984 33221111
Q ss_pred CCCCcccce----EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeeccccccccccccc
Q 001769 342 KPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1016)
Q Consensus 342 ~~pg~~GaD----ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRReka 416 (1016)
.+...+..| |+++|. |.|+.| |=-.||+++.+++++.+-- .+.
T Consensus 231 ~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~----------------------------~~~ 278 (405)
T PRK06207 231 THLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEK----------------------------LQA 278 (405)
T ss_pred CchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHH----------------------------HHh
Confidence 111122222 677776 888654 2236898887777665510 001
Q ss_pred CCccchhhHHHHHHHHHHHHHhC-ccc-HHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC----CHHHH
Q 001769 417 TSNICTAQALLANMAAMYAVYHG-PEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA----DAHAI 488 (1016)
Q Consensus 417 TsnicT~~~l~a~~Aa~y~~~~g-~~G-l~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~----~~~~v 488 (1016)
..++|++.. ...++. .++. ..+ +++..++..++.+++.+.|++++++++..+ .+| +-++++ ...++
T Consensus 279 ~~~~~~~~~--~q~a~~--~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--l~~~l~~~~~~~~~~ 352 (405)
T PRK06207 279 IVSLRAAGY--SQAVLR--TWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSY--LFPRLPRLAVSLHDF 352 (405)
T ss_pred HhccCCCHH--HHHHHH--HHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE--EEEeCcccCCCHHHH
Confidence 112222221 111111 1221 112 455566667777888899988733766532 122 223433 26788
Q ss_pred HHHHH-HcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 489 ASAAY-KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 489 ~~~L~-~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+.|. ++||.+.+- .++.+|+|+.. +.+++++-++.|.
T Consensus 353 ~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~ 397 (405)
T PRK06207 353 VKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIA 397 (405)
T ss_pred HHHHHHhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 99887 679987542 24789999985 5777777776664
No 414
>PLN02187 rooty/superroot1
Probab=99.29 E-value=1.8e-10 Score=136.93 Aligned_cols=204 Identities=15% Similarity=0.211 Sum_probs=135.9
Q ss_pred CccccccccccCCCCh----hhhhcc-----cccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCC--CceeeecCC
Q 001769 588 CHSMIPLGSCTMKLNA----TTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNA 656 (1016)
Q Consensus 588 ~~~~i~LGs~t~~~~~----~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~--~~~~l~~~s 656 (1016)
.+.+|+||.|.|.+.+ ..+... +..+. .+.|.| .+|..++...+.+++.+-.|. +...+..++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK---GNSYGP---GAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC---CCCCCC---CCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 4678999999776321 111111 11122 234444 568777776666766655554 333455555
Q ss_pred hH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC--CCCCCCHHHHHHHHHcCCCCEEE
Q 001769 657 GA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--AKGNINIEELRKAAEANRDNLST 733 (1016)
Q Consensus 657 Ga-~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d--~~g~iD~~~L~~~i~~~~~~t~~ 733 (1016)
|+ +|. .++++.+. .++++|+++++.+..+...+...|++++.++.. .+..+|+++|+++++ +++++
T Consensus 139 G~~~al---~~~~~~l~-----~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~ 207 (462)
T PLN02187 139 GCNQGI---EIVFESLA-----RPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVA 207 (462)
T ss_pred CHHHHH---HHHHHHhc-----CCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEE
Confidence 54 343 33444331 367899999998877777788999999999874 346899999999987 78999
Q ss_pred EEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEcccccc-ccCc-CCC-CccCC---cEEEeCccccccCCCCCCCC
Q 001769 734 LMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL-TSP-GYIGA---DVCHLNLHKTFCIPHGGGGP 804 (1016)
Q Consensus 734 v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a-~~~l-~~p-g~~Ga---Di~~~s~hK~~~~phg~GGP 804 (1016)
|++.+|| .+|.+. .++++|+++|+++|+++++|.+...- ..+- ..+ ..+.- =+++.|+.|+|++| |.
T Consensus 208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p----Gl 283 (462)
T PLN02187 208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP----GW 283 (462)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc----cc
Confidence 9999995 688876 25899999999999999999765311 1110 001 11111 15667999999766 68
Q ss_pred eEEEEEEc
Q 001769 805 GMGPIGVK 812 (1016)
Q Consensus 805 g~G~i~~~ 812 (1016)
.+|++++.
T Consensus 284 RiG~~v~~ 291 (462)
T PLN02187 284 KIGWIALN 291 (462)
T ss_pred eeEEEEec
Confidence 89999984
No 415
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.29 E-value=9.7e-11 Score=135.04 Aligned_cols=226 Identities=11% Similarity=0.063 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHhCCCc---eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHH-HHHh---CCc
Q 001769 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAM---CGM 702 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~---~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~-~a~~---~G~ 702 (1016)
..+.+++.++.+++++|.+. +.|.+++|+.+.++++ .++.. ++.+++....|+.... .+.+ .+
T Consensus 39 f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~---~~l~~------~~~l~i~~G~~~~~~~~~a~~~~~~~- 108 (361)
T TIGR01366 39 VKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAAT---FGLIE------KKSLHLSFGEFSSKFAKAVKLAPWLG- 108 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHH---Hhccc------ccccEEecCHHHHHHHHHHHhhhccC-
Confidence 45678899999999999853 2233455666554444 33211 1233444445554332 2343 34
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc-CCCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCc
Q 001769 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY-PSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1016)
Q Consensus 703 ~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~-Pn~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~ 781 (1016)
++..+++++...++. .++ ++|++|.+++ .|.+|++. ||++| +|++|++++||+++.++...+ ...
T Consensus 109 ~~~~~~~~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~-pi~~I---~~~~g~~~iVDavqs~g~~~i-dv~- 174 (361)
T TIGR01366 109 EPIIVTADPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAV-PVRRP---EGSDDALVVIDATSGAGGLPV-DIA- 174 (361)
T ss_pred CceEEecCCCCCCCC-----ccC---CCCCEEEEcccCCccceec-ccccc---cccCCCeEEEEcCccccCCCC-CHH-
Confidence 777787765444443 234 7899998887 57899998 89888 589999999999987554332 222
Q ss_pred cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCC--CC------CCCCcCCCCCCccCCccchhhHH
Q 001769 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG--GI------PAPEKSQPLGTIAAAPWGSALIL 853 (1016)
Q Consensus 782 ~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g--~~------~~re~~~~~g~i~s~~~G~a~~~ 853 (1016)
.+|++++++||+|+.| ||++++++++++.+.+.....+..+ .+ .....+..+.++.. ......+
T Consensus 175 -~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~--i~~i~~l 246 (361)
T TIGR01366 175 -ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPA--IATLALL 246 (361)
T ss_pred -HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCch--HHHHHHH
Confidence 2899999999999632 4688888898765444321111100 00 00001122222221 0011233
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
..+..|+...| |+..+.+++..+++++.++|++.
T Consensus 247 ~~al~~l~~~g--g~e~~~~r~~~l~~~l~~~l~~~ 280 (361)
T TIGR01366 247 AEQIDWMNGNG--GLDWAVARTADSSSRLYSWAQER 280 (361)
T ss_pred HHHHHHHHHcc--CHHHHHHHHHHHHHHHHHHHHhC
Confidence 44455555442 57888899999999999999883
No 416
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.29 E-value=1.1e-10 Score=136.51 Aligned_cols=223 Identities=15% Similarity=0.141 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC
Q 001769 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~ 711 (1016)
+...++++.+++++|.+. .++.+||++++++++.++.. . .+++.|++....|++....+...|.+++.++.
T Consensus 90 ~~~~~le~~la~~~g~~~-~~~~~SG~~An~~ai~~l~~-----~-~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-- 160 (406)
T PRK13393 90 HYHVLLEAELADLHGKEA-ALLFTSGYVSNWAALSTLGS-----R-LPGCVILSDELNHASMIEGIRHSRAEKRIFRH-- 160 (406)
T ss_pred HHHHHHHHHHHHHhCCCc-EEEeCCcHHHHHHHHHHhhc-----C-CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC--
Confidence 346689999999999764 47778888766555553311 1 13567777888998877667778888887775
Q ss_pred CCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcC------CCC-cc
Q 001769 712 KGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YI 782 (1016)
Q Consensus 712 ~g~iD~~~L~~~i~~~~-~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~------~pg-~~ 782 (1016)
.|++++++.++... +++++|++++++ .+|.+. |+++|.++|+++|+++++|.++..++.+-. .++ ..
T Consensus 161 ---~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~ 236 (406)
T PRK13393 161 ---NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLAD 236 (406)
T ss_pred ---CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCC
Confidence 58889988886432 368889999884 679997 899999999999999999999864442210 111 11
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~ 862 (1016)
..|+++.++.|.|+. +| |+++.++++.+.+.... +....+. + +++..++.+.+.|..
T Consensus 237 ~~~i~~~tlsKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~~t~-~----~~p~~~aa~~aaL~~ 293 (406)
T PRK13393 237 RLTIIEGTLAKAFGV------MG-GYITGSAALCDFIRSFA-----------SGFIFTT-S----LPPAVAAGALASVRH 293 (406)
T ss_pred CCeEEEEeCchhhcc------cC-ceeeCCHHHHHHHHHhC-----------cCceecC-c----cCHHHHHHHHHHHHH
Confidence 258888899999853 22 67777766554432100 0000000 0 122233444555555
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhc-cCCc
Q 001769 863 MGSKGLTEASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 863 lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
+-..+.. .++..++.+|+.++|++ ++++
T Consensus 294 ~~~~~~~--~~~~~~~~~~l~~~L~~~g~~~ 322 (406)
T PRK13393 294 LKASSAE--RERHQDRVARLRARLDKAGIPH 322 (406)
T ss_pred HhhCHHH--HHHHHHHHHHHHHHHHHcCCCc
Confidence 4333322 24557788999999986 4544
No 417
>PRK08068 transaminase; Reviewed
Probab=99.29 E-value=2.1e-09 Score=125.08 Aligned_cols=268 Identities=14% Similarity=0.135 Sum_probs=167.0
Q ss_pred HHHHHHHHHc----C--CCCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 215 NFQTMIADLT----G--LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 215 e~q~~iA~L~----G--~~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
++++.+|+++ | .+.. ++.+++|++.++..++.++. ++||+|++++-.|+.+...++ ..|++++.++
T Consensus 74 ~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~---~~gd~vlv~~P~y~~~~~~~~----~~g~~~~~i~ 146 (389)
T PRK08068 74 FLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLM---NPGDTILVPDPGYPDYLSGVA----LARAQFETMP 146 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhC---CCCCEEEEcCCCCcchHHHHH----hcCCEEEEee
Confidence 3556666665 5 3445 67788999888776655552 378999999999998877754 3578877766
Q ss_pred ch----------hhhc-cCCCEeEEEEEcC-CCCeeeccH---HHHHHHHHhCCcEEEEEecccc-ccC--------CCC
Q 001769 288 LK----------DIDY-KSGDVCGVLVQYP-GTEGEVLDY---GDFIKNAHANGVKVVMATDLLA-LTI--------LKP 343 (1016)
Q Consensus 288 ~~----------~L~~-l~~~t~~V~v~~p-n~~G~i~dl---~eI~~lah~~GalviV~a~~~a-lg~--------l~~ 343 (1016)
.+ ++++ +.+++++|++.+| |.+|.+-+. ++|+++|+++|++++++ +... +.. +..
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~D-eay~~~~~~~~~~~s~~~~ 225 (389)
T PRK08068 147 LIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHD-FAYGAIGFDGQKPVSFLQT 225 (389)
T ss_pred cccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEe-hhhhhhccCCCCCcChhhC
Confidence 52 2333 5567889999988 689998765 68888999999999984 3221 110 000
Q ss_pred CCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 344 pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
.+...-.|+++|. |.||.| |=-.|+++..+++++.+- +.+...++++
T Consensus 226 ~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~l~----------------------------~~~~~~~~~~ 273 (389)
T PRK08068 226 PGAKDVGIELYTLSKTFNMA----GWRVAFAVGNESVIEAIN----------------------------LLQDHLFVSL 273 (389)
T ss_pred CCccCCEEEEecchhccCCc----cceeEeEecCHHHHHHHH----------------------------HHHhhccCCC
Confidence 1112234777786 887643 223688888777765541 0001111221
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccE-EEEecCC---HHHHHHHHHH-cCc
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDT-VKVKCAD---AHAIASAAYK-IEM 497 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~-v~i~~~~---~~~v~~~L~~-~GI 497 (1016)
.+....++..++ ..+.+-++++.++..++.+++.+.|+++| +.+..+. -.- +.+..++ +.++.+.|.+ +||
T Consensus 274 -~~~~q~~~~~~l-~~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~~~~-g~~~~~v~~~~~~~~~~~~~~l~~~~gi 349 (389)
T PRK08068 274 -FGAIQDAAIEAL-LSDQSCVAELVARYESRRNAFISACREIG-WEVDAPK-GSFFAWMPVPKGYTSEQFADLLLEKAHV 349 (389)
T ss_pred -ChHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-eeEEEEEECCCCCCHHHHHHHHHHhCCE
Confidence 111111111111 12334467778888888899999999887 7654321 111 2345442 7889999986 699
Q ss_pred eeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 498 NLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 498 ~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+.+. .++.+|+++. ..++.+...++.|.
T Consensus 350 ~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~ 384 (389)
T PRK08068 350 AVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIG 384 (389)
T ss_pred EEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHH
Confidence 88542 1468999996 35666666666664
No 418
>PRK08175 aminotransferase; Validated
Probab=99.29 E-value=4.2e-10 Score=131.22 Aligned_cols=229 Identities=14% Similarity=0.164 Sum_probs=145.1
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCc
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~-ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~ 702 (1016)
.+|..++...+.+++.+..|.+ .. ++..++|++ |. .++++.+. .++++|+++++.|..+...+...|.
T Consensus 66 ~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l---~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 137 (395)
T PRK08175 66 SRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL---AHLMLATL-----DHGDTVLVPNPSYPIHIYGAVIAGA 137 (395)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH---HHHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 5788777777777777766764 23 465666654 33 23333321 3578999999988877777889999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccH---HHHHHHHHHcCcEEEEEccccccc-cCcC
Q 001769 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGI---DEICKIIHDNGGQVYMDGANMNAQ-VGLT 777 (1016)
Q Consensus 703 ~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di---~~I~~ia~~~g~lv~vDga~~~a~-~~l~ 777 (1016)
+++.++.++++ .++++++++++.+.+++++|++++| |.+|.+. +. ++|+++|+++|+++++|.+...-. .+..
T Consensus 138 ~~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~ 215 (395)
T PRK08175 138 QVRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWK 215 (395)
T ss_pred eEEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCC
Confidence 99999987654 3589999988744458999999988 4688876 45 799999999999999997652111 1100
Q ss_pred -C-----CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 778 -S-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 778 -~-----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
. ++..+..+++.|+.|.|+.| |.++|+++.++++.+.+-. . ......+.+ ..
T Consensus 216 ~~~~~~~~~~~~~~i~~~S~SK~~g~p----GlRiG~~~~~~~l~~~~~~-~-------------~~~~~~~~~----~~ 273 (395)
T PRK08175 216 APSIMQVPGAKDVAVEFFTLSKSYNMA----GWRIGFMVGNPELVSALAR-I-------------KSYHDYGTF----TP 273 (395)
T ss_pred CcchhcCCCcccCEEEEeeccccccCc----chhheeeeCCHHHHHHHHH-H-------------HhhcccCCC----cH
Confidence 1 11112335678999999544 4568999988766554311 0 000011110 11
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
...++.+.+.. +.+-+++..+...++.+++.+.|++
T Consensus 274 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~ 309 (395)
T PRK08175 274 LQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHE 309 (395)
T ss_pred HHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112233321 2333556566667778888888887
No 419
>PLN02483 serine palmitoyltransferase
Probab=99.29 E-value=1.4e-10 Score=138.73 Aligned_cols=228 Identities=17% Similarity=0.162 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCC
Q 001769 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (1016)
Q Consensus 631 ~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d 710 (1016)
.....++++.+++++|.+. .+..++|..++.+++.++. ++++.|++++..|.+....++..|++++.++.
T Consensus 145 ~~~~~ele~~lA~~~g~~~-ai~~~~G~~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~- 214 (489)
T PLN02483 145 TKLHRELEELVARFVGKPA-AIVFGMGYATNSTIIPALI--------GKGGLIISDSLNHNSIVNGARGSGATIRVFQH- 214 (489)
T ss_pred cHHHHHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHhC--------CCCCEEEEcchhhHHHHHHHHHcCCeEEEEeC-
Confidence 3456689999999999766 4556777655533333321 36789999999998888788899999999986
Q ss_pred CCCCCCHHHHHHHHHcC----CCCE-----EEEEEEcC--CCCccccccHHHHHHHHHHcCcEEEEEccccccccCc---
Q 001769 711 AKGNINIEELRKAAEAN----RDNL-----STLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL--- 776 (1016)
Q Consensus 711 ~~g~iD~~~L~~~i~~~----~~~t-----~~v~i~~P--n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l--- 776 (1016)
.|++++++++++. .++| +.+++..+ |..|.+. ++++|.++|+++|+++++|.++..+..+.
T Consensus 215 ----~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~-~l~~I~~la~~~~~~livDEa~s~g~~G~~G~ 289 (489)
T PLN02483 215 ----NTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC-KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR 289 (489)
T ss_pred ----CCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc-CHHHHHHHHHHcCCEEEEECcCccCccCCCCC
Confidence 3678887776521 1233 54555443 4578887 89999999999999999999875332211
Q ss_pred -----CCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 777 -----TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 777 -----~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
......+.||++.+++|+|++ .| |++++++++.+.+.....+ ...+..+ ++. ...
T Consensus 290 g~~~~~~v~~~~~dI~~~SfSKs~g~------~G-G~i~~~~~li~~l~~~~~~-----------~~~~~~~-~p~-~~~ 349 (489)
T PLN02483 290 GVCELLGVDPADVDIMMGTFTKSFGS------CG-GYIAGSKELIQYLKRTCPA-----------HLYATSM-SPP-AVQ 349 (489)
T ss_pred chHHhcCCCcccCcEEEEecchhccc------Cc-eEEEcCHHHHHHHHHhCcc-----------ccccCCc-CHH-HHH
Confidence 000113579999999999953 22 7888887776654211000 0001111 111 111
Q ss_pred HHHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhc-cCCcc
Q 001769 852 ILPISYTYIAMM-GSKGLTEASKIAILNANYMAKRLEK-HYPIL 893 (1016)
Q Consensus 852 ~~~~a~a~l~~l-G~eGl~~~~~~~~~nA~yla~~L~~-~~~v~ 893 (1016)
.++.++.+|..- |.+-..+..++..++.+++.+.|++ ++++.
T Consensus 350 ~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~ 393 (489)
T PLN02483 350 QVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVL 393 (489)
T ss_pred HHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 122233333211 1122344567788999999999988 45543
No 420
>PRK10534 L-threonine aldolase; Provisional
Probab=99.29 E-value=6.3e-11 Score=134.67 Aligned_cols=168 Identities=15% Similarity=0.175 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccc-cHHH-HHhC-CcEEEEEcCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT-AAMC-GMKIVSVGTDA 711 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~-~~~~-a~~~-G~~vv~v~~d~ 711 (1016)
.++++.|++++|.+... ...+|++++...+.+.. .++++|+++.+.|.. +... +... +.+++.++.++
T Consensus 37 ~~L~~~la~~~g~~~~~-v~~~g~~a~~~~l~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (333)
T PRK10534 37 NALQDYAAELSGKEAAL-FLPTGTQANLVALLSHC--------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA 107 (333)
T ss_pred HHHHHHHHHHhCCCeEE-EeCchHHHHHHHHHHhc--------CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC
Confidence 47889999999998764 45556655644444321 256788888776642 2221 2333 47888888888
Q ss_pred CCCCCHHHHHHHHHcC---CCCEEEEEEEcCCCCcccc--ccHHHHHHHHHHcCcEEEEEccccccccC-cC-CCC--cc
Q 001769 712 KGNINIEELRKAAEAN---RDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG-LT-SPG--YI 782 (1016)
Q Consensus 712 ~g~iD~~~L~~~i~~~---~~~t~~v~i~~Pn~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~-l~-~pg--~~ 782 (1016)
++.+|+++|+++++++ ..++++|++++|++ |.+. .+|++|+++|+++|+++++|.|..+.... .. ... ..
T Consensus 108 ~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~-G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~ 186 (333)
T PRK10534 108 DGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN-GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQ 186 (333)
T ss_pred CCCCCHHHHHHhhcccCcCcccceEEEEecCCC-CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHh
Confidence 8999999999999621 01689999999886 7775 24556678899999999999875421110 00 110 12
Q ss_pred CCcEEEeCccccccCCCCCCCCeEE-EEEEcccccccC
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFL 819 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G-~i~~~~~l~~~l 819 (1016)
+.|.++.+++|.|+++ +| +++.+++++..+
T Consensus 187 ~~~~~~~s~SK~~~~~-------~G~~~~~~~~~i~~~ 217 (333)
T PRK10534 187 YCDSFTICLSKGLGTP-------VGSLLVGNRDYIKRA 217 (333)
T ss_pred cCCEEEEEeEcCCCCc-------ccceEEcCHHHHHHH
Confidence 3576667889987543 34 566676665543
No 421
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.29 E-value=1.4e-10 Score=128.56 Aligned_cols=295 Identities=17% Similarity=0.111 Sum_probs=187.1
Q ss_pred CCChHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCC
Q 001769 178 THVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK 256 (1016)
Q Consensus 178 ~~~p~~i~~~i~~~~-~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd 256 (1016)
...|++. +++.+.+ +.-..| |.-+...++++.+++++|.. .+.++.+||+++...+.+.. +++.
T Consensus 11 g~~~~m~-eam~~a~~~~~~~Y---------G~D~~~~~~e~~~ae~~g~~--a~~Fv~sGT~aN~lal~~~~---~~~~ 75 (342)
T COG2008 11 GPTPEMR-EALAAANAVGDDVY---------GEDPTTNALEQRIAELFGKE--AALFVPSGTQANQLALAAHC---QPGE 75 (342)
T ss_pred CCCHHHH-HHHHhccccCCCCC---------CCCHHHHHHHHHHHHHhCCc--eEEEecCccHHHHHHHHHhc---CCCC
Confidence 3466665 4666554 333333 23356677889999999994 48888999999887777664 3788
Q ss_pred EEEEcCCCCHHHHHH--HHHhhcCCCeEEEEe-------Cchhhhc-cC------CCEeEE-EEEcCCCCeeecc---HH
Q 001769 257 TFIIASNCHPQTIDI--CITRADGFDIKVVVS-------DLKDIDY-KS------GDVCGV-LVQYPGTEGEVLD---YG 316 (1016)
Q Consensus 257 ~Vlvs~~~Hps~~~~--l~~~a~~~gi~v~~v-------d~~~L~~-l~------~~t~~V-~v~~pn~~G~i~d---l~ 316 (1016)
.|++.+..|-.+... ...+ ..+.++..+ ++++++. +. ..+.++ +.+.+|..|+|.+ |+
T Consensus 76 ~vi~~~~aHi~~~E~Ga~~~~--~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~ 153 (342)
T COG2008 76 SVICHETAHIYTDECGAPEFF--GGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELE 153 (342)
T ss_pred eEEEeccccceecccCcHHHH--cCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHH
Confidence 999999999443321 1111 123444433 3466665 32 224444 4556678899986 56
Q ss_pred HHHHHHHhCCcEEEE-Eeccc-cccCCCCC---CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEee
Q 001769 317 DFIKNAHANGVKVVM-ATDLL-ALTILKPP---GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1016)
Q Consensus 317 eI~~lah~~GalviV-~a~~~-alg~l~~p---g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~ 390 (1016)
+|.++||++|..+++ |+=++ ++..+.++ -..|+|++..++ |.++ .|..++++.+.+++.++.-+
T Consensus 154 ~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~------~~~gAiv~gn~~~~~~a~~~---- 223 (342)
T COG2008 154 AISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGG------APVGAIVFGNRDFAKRARRW---- 223 (342)
T ss_pred HHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCc------ceeeeEEEcCHHHHHHHHHH----
Confidence 778889999999999 44221 22222222 235899998887 7554 45568888888777655211
Q ss_pred eecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCeEE
Q 001769 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEV 469 (1016)
Q Consensus 391 s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G~~~l 469 (1016)
|+..|--. + + ..++|+.++.++...-....+.+..+.|++|++.|.+. | +++
T Consensus 224 ---------------------rK~~Ggl~--~-k--~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G-~~~ 276 (342)
T COG2008 224 ---------------------RKRAGGLM--R-K--ARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPG-VKL 276 (342)
T ss_pred ---------------------HHHhcccH--h-h--hhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCC-cee
Confidence 01111000 0 1 13344444556655545666777777799999999966 6 998
Q ss_pred cCCCCccEEEEecCCHHHHHHHHHHcCceeec--c-cC--CeEEEEeccCCCHHHHHHHHHHHh
Q 001769 470 QGLPFFDTVKVKCADAHAIASAAYKIEMNLRV--V-DS--NTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 470 ~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~--~-~~--~~lris~te~~t~edid~ll~aL~ 528 (1016)
..++.-|.|-+..+. ...+.|...|+.... . .. ..+|+..+..+|++|+++++..++
T Consensus 277 ~~~~~tN~vf~~l~~--~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~ 338 (342)
T COG2008 277 AFPVETNMVFVRLPE--SAIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIK 338 (342)
T ss_pred ccCCcccEEEEECCh--HHHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHH
Confidence 765666666666664 222667767775432 2 23 369999999999999999998875
No 422
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.28 E-value=1.3e-09 Score=124.14 Aligned_cols=261 Identities=15% Similarity=0.125 Sum_probs=169.1
Q ss_pred HHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc-
Q 001769 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY- 293 (1016)
Q Consensus 215 e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~- 293 (1016)
++++.+|+.+|.+ ++.++.|++.++..+. .. .+||+|++++-.++.+...++ ..|++++.++.+++++
T Consensus 53 ~Lr~~ia~~~~~~--~I~it~Gs~~al~~~~---~~--~~gd~v~v~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~ 121 (330)
T PRK05664 53 GLEAAARAYYGAP--QLLPVAGSQAAIQALP---RL--RAPGRVGVLSPCYAEHAHAWR----RAGHQVRELDEAEVEAA 121 (330)
T ss_pred HHHHHHHHHhCCC--CEEECcCHHHHHHHHH---Hc--cCCCEEEEcCCChHHHHHHHH----HcCCeEEEechhhHhhh
Confidence 4567899999865 6888888886665443 22 278999999999998888764 4699999999888776
Q ss_pred cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-ccCCCCCCcc-cce--EEEecC-ccccccCC
Q 001769 294 KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-LTILKPPGEL-GAD--IVVGSA-QRFGVPMG 364 (1016)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-lg~l~~pg~~-GaD--ivvgs~-k~lg~P~g 364 (1016)
+ ++++++++.+| |.+|.+-+ +++|+++|+++|+++++| +... +....+...+ .-| |+++|. |.||.|
T Consensus 122 ~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~D-E~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~-- 197 (330)
T PRK05664 122 L-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVD-EAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLA-- 197 (330)
T ss_pred h-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEE-CCcccCCCcccccccccCCCEEEEeeccccccCC--
Confidence 5 36777888888 68998876 566667778899998884 3321 1100111111 112 667776 888654
Q ss_pred CCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHH
Q 001769 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1016)
Q Consensus 365 ~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~ 444 (1016)
|=-.||+.+.+++++.+-. -+.+.++++ ....+..+++ . ...-.+
T Consensus 198 --GlRiG~~v~~~~l~~~~~~----------------------------~~~~~~~~~-~~~~~~~~~L--~--~~~~~~ 242 (330)
T PRK05664 198 --GARLGFVLAEPALLRALAE----------------------------LLGPWTVSG-PTRWLAQAAL--A--DTPWQR 242 (330)
T ss_pred --CcceEEEEeCHHHHHHHHH----------------------------hcCCCCCCH-HHHHHHHHHH--h--ChHHHH
Confidence 2236899888777665510 000111211 1111111111 1 112245
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeecc-cCCeEEEEeccCCCHHHHHHH
Q 001769 445 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTTLEDVDKL 523 (1016)
Q Consensus 445 ~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~-~~~~lris~te~~t~edid~l 523 (1016)
++.++..++.+++.+.|++.| ++..+... .-+.+..+++.++.+.|.++||.++.. .++.+|++++. +.++.++|
T Consensus 243 ~~~~~~~~~r~~l~~~L~~~~-~~~~~~~~-~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~--~~~~~~~l 318 (330)
T PRK05664 243 RQRERLLAASQRLAALLRRHG-LTPAGGCA-LFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA--DEADWARL 318 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CcccCCcc-eEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC--CHHHHHHH
Confidence 667777788889999999887 65432211 112334445788999999999998765 35789999885 67889999
Q ss_pred HHHHhC
Q 001769 524 FIVFAG 529 (1016)
Q Consensus 524 l~aL~~ 529 (1016)
+++|..
T Consensus 319 ~~al~~ 324 (330)
T PRK05664 319 DQALLA 324 (330)
T ss_pred HHHHHH
Confidence 998863
No 423
>PRK08363 alanine aminotransferase; Validated
Probab=99.28 E-value=4.2e-10 Score=131.37 Aligned_cols=232 Identities=16% Similarity=0.124 Sum_probs=140.9
Q ss_pred hhhHHHHHHHHHHHHHHHhCC--CceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~--~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++.+.+.+++....|. +...+..++| ++|.. ++++.+. ++++.|+++.+.|..+...++..|.+
T Consensus 69 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 140 (398)
T PRK08363 69 SEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQ---LIFGALL-----DPGDEILIPGPSYPPYTGLVKFYGGV 140 (398)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCE
Confidence 456666665555555555454 3334444455 44443 3333321 36789999999888887778889999
Q ss_pred EEEE-cCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEcccccc-ccC-c
Q 001769 704 IVSV-GTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-L 776 (1016)
Q Consensus 704 vv~v-~~d~~-g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a-~~~-l 776 (1016)
++.+ +.+++ +.+|+++++++++ +++++|++++|+ .+|.+. .++++|+++|+++|+++++|.+...- ..+ .
T Consensus 141 ~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~ 217 (398)
T PRK08363 141 PVEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKH 217 (398)
T ss_pred EEEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcc
Confidence 8888 55555 4689999999997 789999999985 688876 24899999999999999999875310 001 0
Q ss_pred CCCCcc-CCc--EEEeCccccccCCCCCCCCeEEEEEE--cccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 777 TSPGYI-GAD--VCHLNLHKTFCIPHGGGGPGMGPIGV--KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 777 ~~pg~~-GaD--i~~~s~hK~~~~phg~GGPg~G~i~~--~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
.....+ +.+ +++.|++|+|+.| |.++|++++ ++++.+.+-...... .. ...+. +..
T Consensus 218 ~~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~~~~~~~~~~~~~l~~~~~~~---------~~--~~~~~----s~~ 278 (398)
T PRK08363 218 VSPGSLTKDVPVIVMNGLSKVYFAT----GWRLGYIYFVDPEGKLAEVREAIDKL---------AR--IRLCP----NTP 278 (398)
T ss_pred cCHHHcCcCCcEEEEecchhccCCc----cceEEEEEEeCcHHHHHHHHHHHHHH---------hc--ccccC----ChH
Confidence 011111 112 4567999998654 678999998 444332211000000 00 00111 111
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
....+..+|.. ..+-+++..++...+.+++.+.|++.
T Consensus 279 ~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~ 315 (398)
T PRK08363 279 AQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEI 315 (398)
T ss_pred HHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 12222333332 34556666777778888888988763
No 424
>PLN02822 serine palmitoyltransferase
Probab=99.28 E-value=3.9e-10 Score=134.65 Aligned_cols=222 Identities=16% Similarity=0.173 Sum_probs=146.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEc
Q 001769 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~ 708 (1016)
|..+...++++.|++++|.+.. +..++|.++.++ +++++. ++++.|++....|++....+.+.|.++++++
T Consensus 151 g~~~~~~~Lee~La~~~~~~~~-i~~s~G~~a~~s---ai~a~~-----~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~ 221 (481)
T PLN02822 151 GTIDVHLDCETKIAKFLGTPDS-ILYSYGLSTIFS---VIPAFC-----KKGDIIVADEGVHWGIQNGLYLSRSTIVYFK 221 (481)
T ss_pred cCHHHHHHHHHHHHHHhCCCCE-EEECCHHHHHHH---HHHHhC-----CCCCEEEEeCCccHHHHHHHHHcCCeEEEEC
Confidence 4556677899999999998764 444455444433 455441 3678899998888877667788899999998
Q ss_pred CCCCCCCCHHHHHHHHHcC------CCCE-EEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCC
Q 001769 709 TDAKGNINIEELRKAAEAN------RDNL-STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1016)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~------~~~t-~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg 780 (1016)
.+ |.++++..+++. ++++ ++|+++.+ +.+|.+. |+++|+++|++||+++++|.++.++..+ +.|
T Consensus 222 ~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~-~L~~i~~l~~k~~~~LIvDEa~s~gvlG--~~G 293 (481)
T PLN02822 222 HN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIA-PLDEIVRLKEKYRFRVLLDESNSFGVLG--KSG 293 (481)
T ss_pred CC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccC--CCC
Confidence 73 677777666431 1335 78888876 4689987 8999999999999999999888643322 111
Q ss_pred -----c-----cCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCc-cCCccch
Q 001769 781 -----Y-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI-AAAPWGS 849 (1016)
Q Consensus 781 -----~-----~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i-~s~~~G~ 849 (1016)
. ..+|+++.|++|.|+++ | |++++++++++.+... ..+.+ +++. .
T Consensus 294 ~G~~e~~~v~~~~~dii~~s~sKalg~~------G-G~i~g~~~ii~~~~~~---------------~~~~~fsa~l--P 349 (481)
T PLN02822 294 RGLSEHFGVPIEKIDIITAAMGHALATE------G-GFCTGSARVVDHQRLS---------------SSGYVFSASL--P 349 (481)
T ss_pred CChHHHcCCCCCCCeEEEecchhhhhhC------C-eEEEcCHHHHHHHHhc---------------CCceeecccc--C
Confidence 1 24689999999998532 2 7888887766543210 00000 1100 1
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCcc
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPIL 893 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~ 893 (1016)
+..+.++.+.|..+-. ..++.++..++.+++.++|++ ++++.
T Consensus 350 p~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 393 (481)
T PLN02822 350 PYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIG 393 (481)
T ss_pred HHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 2233334445554422 245677888999999999987 35554
No 425
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.28 E-value=2e-10 Score=133.90 Aligned_cols=217 Identities=18% Similarity=0.238 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCccccHHHHHhCCcEE---EEEc
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKI---VSVG 708 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vl-v~~saHg~~~~~a~~~G~~v---v~v~ 708 (1016)
...++.+++++..+++. .++.+||++++++++.++|.|....+ ..+++|+ ...+.||.........|... ...|
T Consensus 79 ~~~~la~~l~~~~~~~~-v~f~~SGseA~e~Aik~ar~~~~~~~-~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 79 PMAKLAGLLTQHSCFDK-VFFANSGAEANEGAIKLARKWGRKHK-NGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred HHHHHHHHHhhccCCCE-EEEeCCcHHHHHHHHHHHHHHhhccC-CCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 34567778887776654 47789999999999999998753222 2334454 46688997665555444221 1111
Q ss_pred CCCC----CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccccc----HHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 709 TDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 709 ~d~~----g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~d----i~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
.... ...|++++++++. +++++|+++... ..|++. + +++|.++|+++|+++++|.+++ + +.+.
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~-~~~~~l~~l~~l~~~~~~llI~DEv~t-G---~GRt 228 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIP-ATREFMQQLRALTKQHGLLLIVDEVQT-G---CGRT 228 (395)
T ss_pred CCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEecccc-C---CCCC
Confidence 1111 1258999999997 789999998654 556665 4 9999999999999999998765 2 3344
Q ss_pred Ccc--------CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhh
Q 001769 780 GYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1016)
Q Consensus 780 g~~--------GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~ 851 (1016)
|.+ .+|+++++ |.++ +|-| +|.+++++++..+.++. +.+++.|++.
T Consensus 229 G~~~a~~~~gv~PDi~t~g--K~lg----~G~p-~~av~~~~~i~~~~~~~-------------------~~~T~~g~pl 282 (395)
T PRK03715 229 GTLFAYELSGIEPDIMTLG--KGIG----GGVP-LAALLAKAEVAVFEAGD-------------------QGGTYNGNPL 282 (395)
T ss_pred cchhhHhhcCCCCceeeeh--hhhh----CCcc-eEEEEEccccccccCCC-------------------cCCCCCCCHH
Confidence 432 36887763 8884 3445 56667787765433221 1123456777
Q ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
.++++.+.|..+-.++ +.++..++.+++.++|++
T Consensus 283 ~~aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~ 316 (395)
T PRK03715 283 MTAVGVAVISQLLAPG---FLEGVRARGEYLKEKLLE 316 (395)
T ss_pred HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHH
Confidence 8888889998886554 456788889999999975
No 426
>PRK07337 aminotransferase; Validated
Probab=99.28 E-value=2.2e-09 Score=124.83 Aligned_cols=269 Identities=14% Similarity=0.175 Sum_probs=163.3
Q ss_pred HHHHHHHHHc----C--CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 215 NFQTMIADLT----G--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 215 e~q~~iA~L~----G--~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
++++.+|+++ | .++.++.+++|++.+...++.++. +++|+|++++-.|+.+...++. .|.+++.++.
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~ 143 (388)
T PRK07337 71 PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV---ERGDEVLMPDPSYPCNRHFVAA----AEGRPVLVPS 143 (388)
T ss_pred HHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc---CCCCEEEEeCCCchhhHHHHHH----cCCEEEEeec
Confidence 3555666665 4 366788899999988776665552 3799999999999998776643 4666666554
Q ss_pred ----------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCC---CCCCcccce
Q 001769 289 ----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL---KPPGELGAD 350 (1016)
Q Consensus 289 ----------~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l---~~pg~~GaD 350 (1016)
+++++ +++++++|++.+| |.+|.+. ++++|+++|+++|++++++.....+..- .+...++.+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 223 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDD 223 (388)
T ss_pred CCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCC
Confidence 33444 6678999999888 6899876 4788999999999999994322122211 112234545
Q ss_pred EE-EecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHH
Q 001769 351 IV-VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1016)
Q Consensus 351 iv-vgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a 428 (1016)
++ ++|. |.|+.| |--.|++.+.+++++.+-. .+....+|++.....
T Consensus 224 vi~~~S~SK~~~~~----G~RiG~~~~~~~l~~~l~~----------------------------~~~~~~~~~s~~~q~ 271 (388)
T PRK07337 224 VITINSFSKYFNMT----GWRLGWLVVPEALVGTFEK----------------------------LAQNLFICASALAQH 271 (388)
T ss_pred EEEEEechhhcCCc----hhheeeeecCHHHHHHHHH----------------------------HHHHhccCCChHHHH
Confidence 54 5665 777543 3347999888776654410 000011222222111
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEc--CC-CCccEEEEecC--------CHHHHHHHH-HHcC
Q 001769 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--GL-PFFDTVKVKCA--------DAHAIASAA-YKIE 496 (1016)
Q Consensus 429 ~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~--~~-~~~~~v~i~~~--------~~~~v~~~L-~~~G 496 (1016)
.+..+ +..-..+-+++..++..++.+++.+.|+++| +.+. .. .+| +.++++ ...++++.| .++|
T Consensus 272 ~~~~~-l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~ll~~~g 347 (388)
T PRK07337 272 AALAC-FEPDTLAIYERRRAEFKRRRDFIVPALESLG-FKVPVMPDGAFY--VYADCRGVAHPAAGDSAALTQAMLHDAG 347 (388)
T ss_pred HHHHH-hccCchHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCCeeEE--EEEecccccCCCCCCHHHHHHHHHHhCC
Confidence 11111 1111112245566677788888999998876 5532 11 122 222332 256777765 5689
Q ss_pred ceeec---c----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 497 MNLRV---V----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 497 I~~~~---~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
|.+.+ . ..+.+|+++.. +.+++.+-++.|.
T Consensus 348 v~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~ 384 (388)
T PRK07337 348 VVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLG 384 (388)
T ss_pred EEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 98743 1 14789999985 5777777666664
No 427
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.28 E-value=2.6e-10 Score=128.55 Aligned_cols=252 Identities=16% Similarity=0.199 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCce----------eeecCChHHHHHHHHHHHHHHHH-hcCC----------CCCCEEEEcC
Q 001769 629 GYQEMFNNLGEWLCTITGFDSF----------SLQPNAGAAGEYAGLMVIRAYHK-ARGD----------HHRNVCIIPV 687 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~~----------~l~~~sGa~ae~a~l~air~~~~-~~g~----------~~~~~Vlv~~ 687 (1016)
...|+..-.-+||+++++++.. .+..++.+++++.++++.|.-.- .-+. ..+-.++.++
T Consensus 110 a~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SD 189 (511)
T KOG0628|consen 110 ACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSD 189 (511)
T ss_pred chHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecC
Confidence 4556666677999999999842 13334445667777777775211 1111 1233678899
Q ss_pred CCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCC---EEEEEEEcCC-CCccccccHHHHHHHHHHcCcEE
Q 001769 688 SAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQV 763 (1016)
Q Consensus 688 saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~---t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv 763 (1016)
.+|.+..+.+...|++++.++.|.+..++.+.|+++|+++..+ +..|..+..+ ..-.++ +|.+|..+|+++|+|+
T Consensus 190 qahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D-~l~elg~Vc~~~glWL 268 (511)
T KOG0628|consen 190 QAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFD-ELEELGPVCREEGLWL 268 (511)
T ss_pred cccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccc-cHHHhcchhhhcCEEE
Confidence 9999999999999999999999999999999999999842111 3334444443 355666 8999999999999999
Q ss_pred EEEccccccccCcC---C---CCccCCcEEEeCccccccCCCCCCCCeEEEEEEccc--ccccCCCCccccCCCCCCCC-
Q 001769 764 YMDGANMNAQVGLT---S---PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPVVSTGGIPAPE- 834 (1016)
Q Consensus 764 ~vDga~~~a~~~l~---~---pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~--l~~~lpg~~~g~~g~~~~re- 834 (1016)
|||+|..- ...++ + -|-.-+|...++.|||+.+-.++. .+++++. +.+......+-....+|...
T Consensus 269 HVDAAYAG-sa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs-----~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~ 342 (511)
T KOG0628|consen 269 HVDAAYAG-SAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCS-----PLWVKDGTKLSRAFNVDPLYLKHAYQGSAP 342 (511)
T ss_pred Eeehhhcc-ccccCHHHHHHhhcchhhccccCChhheeEEeeeee-----cceeecCceeeeeeecChHhhcchhhccCC
Confidence 99987641 11111 1 134458999999999997766554 4666653 22221100000001111000
Q ss_pred --cCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc--cCCcc
Q 001769 835 --KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPIL 893 (1016)
Q Consensus 835 --~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~ 893 (1016)
+... -|.|.....++-|..++.+|.++|++..++++++|+++-+-+.+ .|++.
T Consensus 343 Dyrhwq------ipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~ 399 (511)
T KOG0628|consen 343 DYRHWQ------IPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIV 399 (511)
T ss_pred Cccccc------cccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceee
Confidence 0110 13345567788999999999999999999999999999888776 35554
No 428
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.28 E-value=2.2e-10 Score=132.06 Aligned_cols=217 Identities=14% Similarity=0.108 Sum_probs=140.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++.+++++|.+...+..++|++.. ...+++.+. ++++.|++++..|..+...+...|.+++.++. .++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~ 141 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEI--LELLARAYL-----GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYG 141 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCC
Confidence 368888999999876556666676532 222333321 25689999988776666667889999999998 4567
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHc--CcEEEEEcccccccc-CcCCC----CccCC-c
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQV-GLTSP----GYIGA-D 785 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~--g~lv~vDga~~~a~~-~l~~p----g~~Ga-D 785 (1016)
+|+++++++++ +++++|++++|+ .+|.+. +.+++.++++.+ |+++++|.++..... ....+ .+..- .
T Consensus 142 ~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 142 HDLDAMLAAVT---PRTRLVFIANPNNPTGTYL-PAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 89999999997 788999999995 689987 899999999875 899999987531110 00001 01112 3
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhCh
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~ 865 (1016)
+++.|+.|.|+. +|.++|++++++++.+.+... ....++ +.....++..+|.. .
T Consensus 218 i~~~S~SK~~g~----~G~RiG~l~~~~~~~~~l~~~--------------~~~~~~------~~~~~~~a~~~l~~--~ 271 (367)
T PRK02731 218 VVTRTFSKAYGL----AGLRVGYGIAPPEIIDALNRV--------------RQPFNV------NSLALAAAVAALDD--D 271 (367)
T ss_pred EEEeeehHhhcC----cccceeeeeCCHHHHHHHHHc--------------cCCCCC------CHHHHHHHHHHhCC--H
Confidence 556688898853 356789999987765543210 000011 11222333444432 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 866 KGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 866 eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
+-+++..+....+..++.+.|++.
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~ 295 (367)
T PRK02731 272 AFVEKSRALNAEGMAWLTEFLAEL 295 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 335566666667777888888773
No 429
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.28 E-value=5.1e-11 Score=145.14 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH-HHhCCcEEEEEcCCC
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDA 711 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~-a~~~G~~vv~v~~d~ 711 (1016)
.+.+.|+..++++|.+.+.+..|++++|+.++++++- ++++.||++..+|-+.-.. +.+.|.+.+++....
T Consensus 175 ~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--------~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~ 246 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--------TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR 246 (720)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc
Confidence 4679999999999999988999999989988877754 3678999999999887764 789999999998654
Q ss_pred C-----CCCCHHH-----HHHHHHcCCCC-------EEEEEEEcCCCCccccccHHHHHHH-HHHcCcEEEEEccccccc
Q 001769 712 K-----GNINIEE-----LRKAAEANRDN-------LSTLMVTYPSTHGVYEEGIDEICKI-IHDNGGQVYMDGANMNAQ 773 (1016)
Q Consensus 712 ~-----g~iD~~~-----L~~~i~~~~~~-------t~~v~i~~Pn~~G~i~~di~~I~~i-a~~~g~lv~vDga~~~a~ 773 (1016)
+ |.++.+. ++++|.++.++ .+++++++|++.|++- |+++|+++ +|.++ .++||.|+. +.
T Consensus 247 n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~y-di~~I~~~~~h~~~-~llvDEAhg-ah 323 (720)
T PRK13578 247 NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIY-NARQVVDKIGHLCD-YILFDSAWV-GY 323 (720)
T ss_pred cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceee-cHHHHHHHhhccCC-cEEEeCcch-hh
Confidence 3 4567555 99999865222 6899999999999998 99999998 68888 999998763 22
Q ss_pred cCcC-----C---CCccCCc----EEEeCcccccc
Q 001769 774 VGLT-----S---PGYIGAD----VCHLNLHKTFC 796 (1016)
Q Consensus 774 ~~l~-----~---pg~~GaD----i~~~s~hK~~~ 796 (1016)
..+. . ..+.|+| +++.|.||+++
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~ 358 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA 358 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcch
Confidence 2221 1 2578999 99999999984
No 430
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.28 E-value=3.4e-10 Score=131.60 Aligned_cols=210 Identities=13% Similarity=0.128 Sum_probs=137.9
Q ss_pred cccccccccCCCChhhhhcc-----cccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGE 661 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~ae 661 (1016)
.++.|+.+.+.+++...... ...+.... |.+ .+|..++...+.+++.+..|.+ .. .+..++|++.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~- 103 (388)
T PRK07366 31 ELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHG---YLL---FHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE- 103 (388)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCC---CCC---CCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH-
Confidence 35778877776654322211 11112222 333 4677777777777777766753 33 4666666542
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC
Q 001769 662 YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP 739 (1016)
Q Consensus 662 ~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~~i~~~~~~t~~v~i~~P 739 (1016)
+..++++.+. .+++.|+++++.+..+...++..|.+++.++++++ ...|++++++++. +++++|++++|
T Consensus 104 -al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p 174 (388)
T PRK07366 104 -GTAHLPLAVL-----NPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYP 174 (388)
T ss_pred -HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCC
Confidence 2333333321 35789999999888888888999999999999754 3578999988876 67899999998
Q ss_pred C-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc-cCcC-CC--Ccc--CCc--EEEeCccccccCCCCCCCCeEEE
Q 001769 740 S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGP 808 (1016)
Q Consensus 740 n-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~-~~l~-~p--g~~--GaD--i~~~s~hK~~~~phg~GGPg~G~ 808 (1016)
+ .+|.+. ..+++|+++|+++|+++++|-+...-. .+.. .| ..+ ..+ +++.|+.|+|++| |..+|+
T Consensus 175 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~----GlRiG~ 250 (388)
T PRK07366 175 HNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMG----GFRIGF 250 (388)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCc----chhhee
Confidence 5 678876 357788889999999999997642111 1100 11 111 112 5677999999655 577999
Q ss_pred EEEcccccccC
Q 001769 809 IGVKKHLAPFL 819 (1016)
Q Consensus 809 i~~~~~l~~~l 819 (1016)
++.++++...+
T Consensus 251 ~v~~~~li~~l 261 (388)
T PRK07366 251 AIGNAQLIQAL 261 (388)
T ss_pred hcCCHHHHHHH
Confidence 99887766543
No 431
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.27 E-value=1e-09 Score=127.30 Aligned_cols=251 Identities=16% Similarity=0.207 Sum_probs=168.1
Q ss_pred cccccccccCCCChhhhhcccccccccc-cCCCCCchhhhhHHHHHHHHHHHHHHHhCCC--ceeeecCChHHHHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLM 666 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l~ 666 (1016)
++..+|++++++-.++..+........+ +.+| +..-++.+.|.+++.-+ ...++.+|||+++++++.
T Consensus 66 ~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----------e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiK 135 (447)
T COG0160 66 AVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYY----------EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIK 135 (447)
T ss_pred chhccCCCCHHHHHHHHHHHHHhhcccCCcccc----------hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHH
Confidence 3456888888887777777544321111 2222 23346777888887643 346888999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEcCCCccccHHHHHh--------CC-----cEEEEEcCCCCCC------------CCHHHHH
Q 001769 667 VIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM--------CG-----MKIVSVGTDAKGN------------INIEELR 721 (1016)
Q Consensus 667 air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~--------~G-----~~vv~v~~d~~g~------------iD~~~L~ 721 (1016)
.+|.|. ++...|-...+.||.-..+..+ .| -.|..+|.....+ -..+.++
T Consensus 136 iAr~~T-----gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e 210 (447)
T COG0160 136 IARAYT-----GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210 (447)
T ss_pred HHHHHh-----CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHH
Confidence 999872 1234455578889965444321 11 1377777643221 1244566
Q ss_pred HHHHcC---CCCEEEEEEEcC-CCCccccc---cHHHHHHHHHHcCcEEEEEccccccccCcCCCCccC--------CcE
Q 001769 722 KAAEAN---RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG--------ADV 786 (1016)
Q Consensus 722 ~~i~~~---~~~t~~v~i~~P-n~~G~i~~---di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~G--------aDi 786 (1016)
..+.+. ..++++++++.- +..|++.+ =++++.++|++||+++|+|-+| .|+.+.|.|- +||
T Consensus 211 ~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ----tG~GRTG~~fa~E~~gv~PDi 286 (447)
T COG0160 211 RALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ----TGFGRTGKMFAFEHFGVEPDI 286 (447)
T ss_pred HHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCccccchhhhhcCCCCCE
Confidence 655432 246899999874 56777763 3789999999999999999765 5566766542 799
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
+++ .|.++ +|-| +|.++.++++....|+... .++.|+...++++.+.|..+-.+
T Consensus 287 vt~--aK~ig----~G~P-l~avv~r~ei~~~~~g~~~-------------------~Tf~GNpva~Aaa~AvL~vie~e 340 (447)
T COG0160 287 VTL--AKSLG----GGLP-LSAVVGRAEIMDWPPGGHG-------------------GTFGGNPVACAAALAVLDVIEEE 340 (447)
T ss_pred EEe--ccccc----CCCc-eeEEeccHHhcccCCcccC-------------------CCCCcCHHHHHHHHHHHHHHHHc
Confidence 977 37774 4444 6677788887764443221 12667888999999999988887
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 001769 867 GLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+| .+++....+||.++|.+
T Consensus 341 ~L---~~~a~~~G~~l~~~L~~ 359 (447)
T COG0160 341 NL---LERAAELGEYLRDRLEE 359 (447)
T ss_pred cH---HHHHHHHHHHHHHHHHH
Confidence 65 55778889999999975
No 432
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.27 E-value=1.3e-09 Score=127.01 Aligned_cols=265 Identities=14% Similarity=0.124 Sum_probs=161.8
Q ss_pred HHHHHHHHc----CC--CCcc-EEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----GL--PMSN-ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G~--~~an-asl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.+|+++ |. +..+ +.+++|++.++..++.++. ++||+|++++-.|+.+...+. ..|++++.++.
T Consensus 78 lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~---~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~ 150 (394)
T PRK05942 78 FRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV---NPGDVVLVPSPAYPAHFRGPL----IAGAQIYPIIL 150 (394)
T ss_pred HHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC---CCCCEEEEcCCCCcchHHHHH----HcCCEEEEeec
Confidence 445555554 54 3444 6677888888877666652 379999999999998877654 35777776543
Q ss_pred ----------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccC--------CC-CC
Q 001769 289 ----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTI--------LK-PP 344 (1016)
Q Consensus 289 ----------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~--------l~-~p 344 (1016)
+++++ +++++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +...... +. -+
T Consensus 151 ~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~D-e~y~~~~~~~~~~~~~~~~~ 229 (394)
T PRK05942 151 KPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHD-LCYAELAFDGYQPTSLLEIP 229 (394)
T ss_pred CCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEe-ccchhhccCCCCCCChhhCC
Confidence 33444 5678999999988 78999886 889999999999999984 2221110 00 01
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 345 g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
+..+..|.++|. |.||.| |=..|++++++++++.+.. -+.+...+.+
T Consensus 230 ~~~~~~i~~~SfSK~~~~~----GlRiG~i~~~~~l~~~l~~----------------------------~~~~~~~~~~ 277 (394)
T PRK05942 230 GAKDIGVEFHTLSKTYNMA----GWRVGFVVGNRHIIQGLRT----------------------------LKTNLDYGIF 277 (394)
T ss_pred CccccEEEEecchhccCCh----hhheeeeecCHHHHHHHHH----------------------------HHhhcccCCC
Confidence 112345667776 877543 1136899888877665510 0000011111
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC---HHHHHHH-HHHcCc
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD---AHAIASA-AYKIEM 497 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~---~~~v~~~-L~~~GI 497 (1016)
......++.+ +. +..+.++++.++..++.+++.+.|++.| +++..+ .+| +-++.+. ..++... |.++||
T Consensus 278 ~~~q~~~~~~-l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~f--~~~~~~~~~~~~~~~~~~l~~~gV 352 (394)
T PRK05942 278 SALQKAAETA-LQ-LPDSYLQQVQERYRTRRDFLIQGLGELG-WNIPPTKATMY--LWVPCPVGMGSTDFALNVLQKTGV 352 (394)
T ss_pred HHHHHHHHHH-Hh-CcHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeeE--EEEECCCCCCHHHHHHHHHHHCCE
Confidence 1111111111 22 2345677888888888999999998887 776532 122 2234432 5666665 457899
Q ss_pred eeecc------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001769 498 NLRVV------DSNTVTASFDETTTLEDVDKLFIVF 527 (1016)
Q Consensus 498 ~~~~~------~~~~lris~te~~t~edid~ll~aL 527 (1016)
.+... ..+.+|+++.. ..+.+.+.++.+
T Consensus 353 ~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l 386 (394)
T PRK05942 353 VVTPGNAFGEGGEGYVRISLIA--DCDRLGEALDRL 386 (394)
T ss_pred EEeCChhhCcCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 87542 24789999963 344444444444
No 433
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.27 E-value=2.9e-10 Score=132.05 Aligned_cols=238 Identities=18% Similarity=0.195 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHH-HHhCCcEEEEEcC---
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGT--- 709 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~-a~~~G~~vv~v~~--- 709 (1016)
+.+|++.+++++|++.+ +.+++|+.|+.. +.. . +.+++++| |...|..-... ....|...+.+..
T Consensus 80 ~~~LE~~vAe~lG~e~a-V~v~sGTaAl~l-l~~---l----~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a 148 (460)
T PRK13237 80 FYHLEETVQEYYGFKHV-VPTHQGRGAENL-LSR---I----AIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEA 148 (460)
T ss_pred HHHHHHHHHHHHCCCeE-EEeCCHHHHHHH-HHH---h----CCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccc
Confidence 45789999999999974 667788776632 211 1 22356654 55545432222 4567775554431
Q ss_pred -------CCCCCCCHHHHHHHHHcC-CCCEEEEEEEcC-CCC-cccc--ccHHHHHHHHHHcCcEEEEEcccccccc---
Q 001769 710 -------DAKGNINIEELRKAAEAN-RDNLSTLMVTYP-STH-GVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV--- 774 (1016)
Q Consensus 710 -------d~~g~iD~~~L~~~i~~~-~~~t~~v~i~~P-n~~-G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~--- 774 (1016)
..+|.+|+++|+++|+++ .+++..|.++.+ |.. |... .|+++|.++|+++|+.||.|+|+.+.-.
T Consensus 149 ~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI 228 (460)
T PRK13237 149 HDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFI 228 (460)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhh
Confidence 135899999999999843 234555555554 444 4331 2799999999999999999999864421
Q ss_pred -----CcC-CC-C------ccCCcEEEeCccccccCCCCCCCCeEEEEEEcc-cccccCCCCccccCCCCCCCCcCCCCC
Q 001769 775 -----GLT-SP-G------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1016)
Q Consensus 775 -----~l~-~p-g------~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~-~l~~~lpg~~~g~~g~~~~re~~~~~g 840 (1016)
++. .+ + --.+|++++|+||.+..|. +|+|++++ ++..++....+- ++ |
T Consensus 229 ~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~------GG~i~t~D~eL~~~~r~~~~~-------~e-----G 290 (460)
T PRK13237 229 KEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI------GGFLAMNDEELFDEAKELVVV-------YE-----G 290 (460)
T ss_pred cccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC------ceEEEECCHHHHHHHHHhccc-------cC-----C
Confidence 111 11 1 1248999999999986543 46888885 444433221110 01 0
Q ss_pred CccCCccchhhHHHHHHH-HHHHhChhhHHHHHHHHHHHHHHHHHHHhc-cCCccccCCCCceeeEEEEEe
Q 001769 841 TIAAAPWGSALILPISYT-YIAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDL 909 (1016)
Q Consensus 841 ~i~s~~~G~a~~~~~a~a-~l~~lG~eGl~~~~~~~~~nA~yla~~L~~-~~~v~y~g~~~~~~he~i~~~ 909 (1016)
- . ++.|-++.=..|.+ -|...-.+ ...+..+.+++||.++|.+ +.+|..|. .| |.+.++.
T Consensus 291 ~-~-tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~p~-gg---H~v~vda 352 (460)
T PRK13237 291 M-P-SYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVEPV-GG---HAVFLDA 352 (460)
T ss_pred C-c-CCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceecCC-Cc---eEEEEEh
Confidence 0 0 12222121111111 12211111 5566788899999999977 78888763 23 5565653
No 434
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.27 E-value=2.4e-10 Score=134.74 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=159.5
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCceeeecCChHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 670 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G-~~~~~l~~~sGa~ae~a~l~air~ 670 (1016)
..+|+|.+.+..+...+......+...|| ...++.+.|++++. ++ ..++.+||++++++++..+|.
T Consensus 65 ~~lGh~~p~v~~ai~~q~~~~~~~~~~~~------------~~~~la~~l~~~~p~~~-~v~f~~sGseA~e~AlklAr~ 131 (428)
T PRK12389 65 IITGHAHPHITKAITEAAENGVLYGTPTE------------LEIEFAKMLKEAIPSLE-KVRFVNSGTEAVMTTIRVARA 131 (428)
T ss_pred cccCCCCHHHHHHHHHHHHhCCccCCCCH------------HHHHHHHHHHHhCCCCc-EEEEeCCHHHHHHHHHHHHHH
Confidence 45888887776666555433222221121 23467788888774 33 346789999999999999988
Q ss_pred HHHhcCCCCCCEEE-EcCCCccccHHHHHhCCc-------------------EEEEEcCCCCCCCCHHHHHHHHHcCCCC
Q 001769 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------------KIVSVGTDAKGNINIEELRKAAEANRDN 730 (1016)
Q Consensus 671 ~~~~~g~~~~~~Vl-v~~saHg~~~~~a~~~G~-------------------~vv~v~~d~~g~iD~~~L~~~i~~~~~~ 730 (1016)
|. +|.+|+ ...+.||.........|. .+..++. .|++++++.++++.++
T Consensus 132 ~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 132 YT------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWGDE 200 (428)
T ss_pred hh------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcCCc
Confidence 72 234454 467889976544332221 1222222 3799999999766678
Q ss_pred EEEEEEEcC-CCCcccccc----HHHHHHHHHHcCcEEEEEccccccccCcCCCC--------ccCCcEEEeCccccccC
Q 001769 731 LSTLMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCI 797 (1016)
Q Consensus 731 t~~v~i~~P-n~~G~i~~d----i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg--------~~GaDi~~~s~hK~~~~ 797 (1016)
+++|+++.. +..|++. + +++|.++|+++|+++++|-+++ |+ +.+ ..-+|++++ -|.+
T Consensus 201 vaavi~EPv~g~~G~~~-p~~~yl~~l~~lc~~~g~llI~DEV~t----G~-Rt~~~~a~~~~gv~PDivt~--gK~l-- 270 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVE-PKPGFLEAVNELAHEAGALVIYDEVIT----AF-RFMYGGAQDLLGVEPDLTAL--GKII-- 270 (428)
T ss_pred EEEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEcccc----cc-ccCcchhhHHhCCCCCeeee--chhh--
Confidence 999999863 5667776 5 9999999999999999998764 22 221 123788755 3766
Q ss_pred CCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHH
Q 001769 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1016)
Q Consensus 798 phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~ 877 (1016)
++|-| +|.+++++++.+.+... + .....+++.|+++.++++.+.|..+-.+++ .++...
T Consensus 271 --ggG~P-i~av~~~~~i~~~~~~~--~-------------~~~~~~T~~gnpl~~Aaala~L~~l~~~~l---~~~~~~ 329 (428)
T PRK12389 271 --GGGLP-IGAYGGRKDIMEQVAPL--G-------------PAYQAGTMAGNPASMAAGIACLEVLQQEGV---YEKLDR 329 (428)
T ss_pred --cCCCc-eeEEeEHHHHHhhhccC--C-------------CcccccCCccCHHHHHHHHHHHHHHhcccH---HHHHHH
Confidence 44556 55567888776654210 0 011223466788899999999999977654 557778
Q ss_pred HHHHHHHHHhc
Q 001769 878 NANYMAKRLEK 888 (1016)
Q Consensus 878 nA~yla~~L~~ 888 (1016)
+.+||.++|++
T Consensus 330 ~g~~l~~~L~~ 340 (428)
T PRK12389 330 LGAMLEEGILE 340 (428)
T ss_pred HHHHHHHHHHH
Confidence 89999999976
No 435
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.27 E-value=6.2e-10 Score=128.21 Aligned_cols=225 Identities=15% Similarity=0.165 Sum_probs=147.9
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..+|+|.+++..+...+......+... |.. +...++.+.+++++|.+. .++.+||+++.++++.++|.|
T Consensus 36 ~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~--------~~~~~la~~l~~~~~~~~-v~~~~SGseA~e~Alklar~~ 104 (364)
T PRK04013 36 NVLGHNHPEWVEEMSEQLEKLVVAGPM--FEH--------EEKEEMLEELSKWVNYEY-VYMGNSGTEAVEAALKFARLY 104 (364)
T ss_pred ccCCCCCHHHHHHHHHHHHhcCCccCC--cCC--------HHHHHHHHHHHhhcCCCE-EEEeCchHHHHHHHHHHHHHH
Confidence 457888766665555544322111111 111 223477888999988775 466899999999999998876
Q ss_pred HHhcCCCCCCEEEE-cCCCccccHHHHHh-------CCc-----EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001769 672 HKARGDHHRNVCII-PVSAHGTNPATAAM-------CGM-----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1016)
Q Consensus 672 ~~~~g~~~~~~Vlv-~~saHg~~~~~a~~-------~G~-----~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~ 738 (1016)
+ +|++|+. ..+.||....+... .++ .++.++. .|++++++.+. +++++|+++.
T Consensus 105 ---~---gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~---~~~aAvivEp 170 (364)
T PRK04013 105 ---T---GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAIT---KETAAVIFEP 170 (364)
T ss_pred ---h---CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhc---CCcEEEEEcC
Confidence 2 2455555 66888875444321 111 2334443 37899999997 7899999987
Q ss_pred C-CCCcccccc---HHHHHHHHHHcCcEEEEEccccccccCcCCCCcc--------CCcEEEeCccccccCCCCCCCCeE
Q 001769 739 P-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGM 806 (1016)
Q Consensus 739 P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~--------GaDi~~~s~hK~~~~phg~GGPg~ 806 (1016)
. ...|++.+| +++|.++|+++|+++++|.+++ |+ +.|.+ .+|++++ -|.+ ++|-| +
T Consensus 171 i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t----G~-RtG~~~a~~~~gv~PDiv~~--gK~l----ggG~P-~ 238 (364)
T PRK04013 171 IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS----GL-RTGKFLAIEHYKVEPDIVTM--GKGI----GNGVP-V 238 (364)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh----cC-CCCchhHHHhcCCCCCEEEe--cccc----cCCce-e
Confidence 4 355666656 9999999999999999998764 44 55543 3688876 3776 34545 4
Q ss_pred EEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHH
Q 001769 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1016)
Q Consensus 807 G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~ 875 (1016)
|.++.++++.+ +. ..+++.|+++.++++.+.|..+-.++|.+.++..
T Consensus 239 ~a~~~~~~~~~---~~-------------------~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~ 285 (364)
T PRK04013 239 SLTLTNFDVER---GK-------------------HGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK 285 (364)
T ss_pred EEEEecccccC---CC-------------------cCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 55555654311 10 1124677889999999999999888877665543
No 436
>PRK08363 alanine aminotransferase; Validated
Probab=99.26 E-value=6.5e-09 Score=121.40 Aligned_cols=274 Identities=12% Similarity=0.136 Sum_probs=164.1
Q ss_pred HHHHHHHHHHc----C--CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe-
Q 001769 214 LNFQTMIADLT----G--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS- 286 (1016)
Q Consensus 214 ~e~q~~iA~L~----G--~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v- 286 (1016)
.++++.+|+++ | .+..++.+++|++.++..++.++ . ++||+|+++...|+.+...++. .|.+++.+
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~-~--~~gd~Vl~~~p~y~~~~~~~~~----~g~~~v~~~ 145 (398)
T PRK08363 73 PELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGAL-L--DPGDEILIPGPSYPPYTGLVKF----YGGVPVEYR 145 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-C--CCCCEEEEcCCCCcchHHHHHH----cCCEEEEec
Confidence 34566777776 3 45668889999998888777666 2 3799999999999988776543 45555444
Q ss_pred C---------chhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC----CCCcc-
Q 001769 287 D---------LKDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK----PPGEL- 347 (1016)
Q Consensus 287 d---------~~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~----~pg~~- 347 (1016)
+ ++++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++. ........ +...+
T Consensus 146 ~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~De-ay~~~~~~~~~~~~~~~~ 224 (398)
T PRK08363 146 TIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDE-IYDLMTYEGKHVSPGSLT 224 (398)
T ss_pred cccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhh-hhhhhccCCcccCHHHcC
Confidence 2 233444 6678899999888 68998876 8999999999999999942 22110110 10111
Q ss_pred cc--eEEEecC-ccccccCCCCCcceEEEEe--ehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 348 GA--DIVVGSA-QRFGVPMGYGGPHAAFLAT--SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 348 Ga--Divvgs~-k~lg~P~g~GGP~~Gfl~~--~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
+. =|++.|. |.|+.| |-..||+++ .+++++.+-..+ ... ...++|.
T Consensus 225 ~~~~vi~~~SfSK~~~~~----GlRiG~~~~~~~~~~~~~l~~~~--------------------~~~-----~~~~~~~ 275 (398)
T PRK08363 225 KDVPVIVMNGLSKVYFAT----GWRLGYIYFVDPEGKLAEVREAI--------------------DKL-----ARIRLCP 275 (398)
T ss_pred cCCcEEEEecchhccCCc----cceEEEEEEeCcHHHHHHHHHHH--------------------HHH-----hcccccC
Confidence 11 2445665 877543 345799987 444444331000 000 0001122
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEec---CCHHHH-HHHHHHcC
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKC---ADAHAI-ASAAYKIE 496 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~---~~~~~v-~~~L~~~G 496 (1016)
+......++.+ +. ...+-++++.++..++.+++.+.|++++++++..+ .++--+.+.. ....++ .+.|.++|
T Consensus 276 s~~~q~~~~~~-l~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~g 353 (398)
T PRK08363 276 NTPAQFAAIAG-LT-GPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAH 353 (398)
T ss_pred ChHHHHHHHHH-Hh-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCC
Confidence 12211111111 11 13455777788888899999999988843765432 1221112221 123444 45567889
Q ss_pred ceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 497 MNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 497 I~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
|.+... .++.+|+|+. .+.+++++.++.|+
T Consensus 354 V~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~ 389 (398)
T PRK08363 354 VLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFE 389 (398)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 987542 2468999986 56888888887775
No 437
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.26 E-value=1.2e-09 Score=127.95 Aligned_cols=167 Identities=14% Similarity=0.171 Sum_probs=111.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCC------CceeeecCCh-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHh
Q 001769 627 AQGYQEMFNNLGEWLCTITGF------DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM 699 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~------~~~~l~~~sG-a~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~ 699 (1016)
.+|..+ +++.+++++|. +...+..++| ++|. .++++.+. .++++|+++...+..+...+..
T Consensus 72 ~~g~~~----lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al---~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~ 139 (403)
T TIGR01265 72 SVGALA----AREAVAEYLSSDLPGKLTADDVVLTSGCSQAI---EICIEALA-----NPGANILVPRPGFPLYDTRAAF 139 (403)
T ss_pred CCCCHH----HHHHHHHHHHhhcCCCCCHHHEEEecChHHHH---HHHHHHhC-----CCCCEEEEeCCCchhHHHHHHH
Confidence 356544 44555555553 2223444444 4443 34444431 2567899999877766667788
Q ss_pred CCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEcccccc-c
Q 001769 700 CGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-Q 773 (1016)
Q Consensus 700 ~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a-~ 773 (1016)
.|++++.++++. ++.+|+++++++++ +++++|++++|+ .+|.+. .++++|.++|+++|+++++|.+...- .
T Consensus 140 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~ 216 (403)
T TIGR01265 140 SGLEVRLYDLLPEKDWEIDLDGLEALAD---EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVF 216 (403)
T ss_pred cCCEEEEecCCcccCCccCHHHHHHHhC---cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccc
Confidence 999999998753 46799999999987 789999999984 688885 24899999999999999999875311 1
Q ss_pred cC--cCCCCccCC--c-EEEeCccccccCCCCCCCCeEEEEEEc
Q 001769 774 VG--LTSPGYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1016)
Q Consensus 774 ~~--l~~pg~~Ga--D-i~~~s~hK~~~~phg~GGPg~G~i~~~ 812 (1016)
.+ ......+.. . |++.|++|.|+.| |.++|++++.
T Consensus 217 ~~~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~ 256 (403)
T TIGR01265 217 GDAPFIPMASFASIVPVLSLGGISKRWVVP----GWRLGWIIIH 256 (403)
T ss_pred CCCCccchhhhccCCcEEEEeecccccCCC----cceEEEEEEe
Confidence 11 001111111 2 5667999998655 5679999874
No 438
>PLN02624 ornithine-delta-aminotransferase
Probab=99.26 E-value=3.9e-10 Score=134.45 Aligned_cols=217 Identities=18% Similarity=0.261 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHh-cCCC-CCCEEEE-cCCCccccHHHHHhCC---------
Q 001769 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCII-PVSAHGTNPATAAMCG--------- 701 (1016)
Q Consensus 634 ~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~-~g~~-~~~~Vlv-~~saHg~~~~~a~~~G--------- 701 (1016)
..++.+.|++++|++. .++.+||++++++++..+|.|+.. +|.. .+.+|+. ..+.||....+..+.|
T Consensus 119 ~~~la~~L~~~~~~~~-~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 197 (474)
T PLN02624 119 FPEFAEYLTSMFGYDM-VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG 197 (474)
T ss_pred HHHHHHHHHhhcCCCe-EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCC
Confidence 3478889999998775 466899999999999998887533 2321 1233443 5678886544432211
Q ss_pred ---cEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc-cc--HHHHHHHHHHcCcEEEEEcccccccc
Q 001769 702 ---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE-EG--IDEICKIIHDNGGQVYMDGANMNAQV 774 (1016)
Q Consensus 702 ---~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~-~d--i~~I~~ia~~~g~lv~vDga~~~a~~ 774 (1016)
-.+..++. .|++.+++.++.+.+++++|+++.+. ..|.+. ++ +++|.++|+++|+++++|.+++ +++
T Consensus 198 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~G 271 (474)
T PLN02624 198 PLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLA 271 (474)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcC
Confidence 11334444 37899999997555789999999874 678765 22 9999999999999999998875 222
Q ss_pred CcCCCC--------ccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccC-CCCccccCCCCCCCCcCCCCCCccCC
Q 001769 775 GLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1016)
Q Consensus 775 ~l~~pg--------~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l-pg~~~g~~g~~~~re~~~~~g~i~s~ 845 (1016)
+.| ...+|+++++ |.|+ +|+..+|.+++++++...+ ++. ..++
T Consensus 272 ---rtG~~~a~~~~~i~pDiv~ls--K~lg----gG~~pigav~~~~~i~~~~~~~~-------------------~~~T 323 (474)
T PLN02624 272 ---RTGKMLACDWEEVRPDVVILG--KALG----GGVIPVSAVLADKDVMLCIKPGE-------------------HGST 323 (474)
T ss_pred ---cCcchhhHHhcCCCCCEEEec--cccc----CCCCcceeeeecHHHHhHhccCC-------------------cCCC
Confidence 222 2346888763 8764 4545578888887655433 110 1112
Q ss_pred ccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 846 ~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+.|+...++++.+.|..+-.+++ .++...+.+++.++|++
T Consensus 324 ~~g~pl~~aaa~aaLe~l~~~~l---~~~~~~~~~~l~~~L~~ 363 (474)
T PLN02624 324 FGGNPLASAVAMAALQVVQDEKL---AERSAKLGQELRDQLQK 363 (474)
T ss_pred CCCCHHHHHHHHHHHHHHHhchH---HHHHHHHHHHHHHHHHH
Confidence 33455666777777777655444 34556677788887765
No 439
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.26 E-value=3.3e-10 Score=129.82 Aligned_cols=218 Identities=16% Similarity=0.191 Sum_probs=143.7
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCC
Q 001769 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1016)
Q Consensus 636 el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~i 715 (1016)
++++.+++.++.+...+..++|++. +..++++.+. .++++|+++++.|..+...++..|++++.++.++++.+
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDE--VLAHAFLAFF-----NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCC
Confidence 6788888888988666666666541 3344444432 35789999998887777778899999999999888889
Q ss_pred CHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHc-CcEEEEEccccccccCcC-CC--CccCCcEEEeC
Q 001769 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLT-SP--GYIGADVCHLN 790 (1016)
Q Consensus 716 D~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~-g~lv~vDga~~~a~~~l~-~p--g~~GaDi~~~s 790 (1016)
|++++++ ++++|++.+|+ .+|.+. +.+++.++++.+ |+++++|.+... +.+-. .+ ....-.+++.|
T Consensus 137 d~~~l~~-------~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~S 207 (353)
T PRK05387 137 DVEDYLR-------PNGGIIFPNPNAPTGIAL-PLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQT 207 (353)
T ss_pred CHHHHHh-------cCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEEe
Confidence 9998863 24578888995 689997 799999998876 999999976521 11100 01 12233588889
Q ss_pred ccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHH
Q 001769 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1016)
Q Consensus 791 ~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~ 870 (1016)
++|.|++| |..+|++++++++.+.+... .......+. +.....++.+.+. ..+.+++
T Consensus 208 ~SK~~~~~----GlR~G~~~~~~~~~~~l~~~-------------~~~~~~~~~----~~~~q~~~~~~l~--~~~~~~~ 264 (353)
T PRK05387 208 FSKSRSLA----GLRVGFAIGHPELIEALNRV-------------KNSFNSYPL----DRLAQAGAIAAIE--DEAYFEE 264 (353)
T ss_pred hhHhhcch----hhhceeeecCHHHHHHHHHh-------------hccCCCCCc----CHHHHHHHHHHhc--CHHHHHH
Confidence 99999655 56799999887665443110 000011111 1111122223332 2344667
Q ss_pred HHHHHHHHHHHHHHHHhc-cCCc
Q 001769 871 ASKIAILNANYMAKRLEK-HYPI 892 (1016)
Q Consensus 871 ~~~~~~~nA~yla~~L~~-~~~v 892 (1016)
..++..++.+++.+.|++ ++++
T Consensus 265 ~~~~~~~~~~~l~~~L~~~g~~~ 287 (353)
T PRK05387 265 TRAKVIATRERLVEELEALGFEV 287 (353)
T ss_pred HHHHHHHHHHHHHHHHHHCCCeE
Confidence 777788888999999987 4443
No 440
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.26 E-value=7.2e-09 Score=121.30 Aligned_cols=270 Identities=11% Similarity=0.095 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHcCC------CCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 213 LLNFQTMIADLTGL------PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 213 i~e~q~~iA~L~G~------~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
..++++.+|+++|. +..++.++.|+|.++..++.++. .+||+|++++..|+.+...+ +..|++++.+
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~ 147 (403)
T TIGR01265 75 ALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALA---NPGANILVPRPGFPLYDTRA----AFSGLEVRLY 147 (403)
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhC---CCCCEEEEeCCCchhHHHHH----HHcCCEEEEe
Confidence 34567788888874 45678899999988887777663 37899999999988765544 3457777765
Q ss_pred Cc----------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c--cC--CCCCCc
Q 001769 287 DL----------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L--TI--LKPPGE 346 (1016)
Q Consensus 287 d~----------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-l--g~--l~~pg~ 346 (1016)
++ +++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++. ..+ + .. ..+...
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~ 226 (403)
T TIGR01265 148 DLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADE-IYGHMVFGDAPFIPMAS 226 (403)
T ss_pred cCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEc-cccccccCCCCccchhh
Confidence 43 34444 5678899999988 68998865 8999999999999999943 221 1 10 001111
Q ss_pred cc--ce-EEEecC-ccccccCCCCCcceEEEEeeh--hh-----hhcCCCceEeeeecCCCCcceeeecccccccccccc
Q 001769 347 LG--AD-IVVGSA-QRFGVPMGYGGPHAAFLATSQ--EY-----KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK 415 (1016)
Q Consensus 347 ~G--aD-ivvgs~-k~lg~P~g~GGP~~Gfl~~~~--~l-----~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRek 415 (1016)
+. .. |+++|. |.|+.| |=-.||+.+.. ++ ++.+ ++..
T Consensus 227 ~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~----------------------------~~~~ 274 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVP----GWRLGWIIIHDPHGIFRDTVLQGL----------------------------KNLL 274 (403)
T ss_pred hccCCcEEEEeecccccCCC----cceEEEEEEeCchhhhHHHHHHHH----------------------------HHHh
Confidence 21 12 455665 777654 22368877632 21 1111 0000
Q ss_pred cCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC--------CH
Q 001769 416 ATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA--------DA 485 (1016)
Q Consensus 416 aTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~--------~~ 485 (1016)
. ...+.+......++. ++......=+++..+++.++.+++.+.|+.++|+++..+ ..| +-++++ ..
T Consensus 275 ~-~~~~~~~~~q~~~~~-~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~ 350 (403)
T TIGR01265 275 Q-RILGPATIVQGALPD-ILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMY--LMVKLELELFPEIKDD 350 (403)
T ss_pred h-hhcCCChHHHHHHHH-HHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeE--EEEeccccccCCCCCH
Confidence 0 001111111111111 122112223566677778888899999988733764322 122 223332 25
Q ss_pred HHHHHHH-HHcCceeecc----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 486 HAIASAA-YKIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 486 ~~v~~~L-~~~GI~~~~~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+.| .++||.+.+- .++.+|+++.. .++.+++-++.|.
T Consensus 351 ~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~~l~ 396 (403)
T TIGR01265 351 VDFCEKLVREESVICLPGSAFGLPNWVRITITV--PESMLEEACSRIK 396 (403)
T ss_pred HHHHHHHHHhCCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 6787776 5679987542 25789999983 4677777776664
No 441
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.26 E-value=2.8e-09 Score=124.99 Aligned_cols=269 Identities=17% Similarity=0.184 Sum_probs=170.3
Q ss_pred HHHHHHHHH----cCC---CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 215 NFQTMIADL----TGL---PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 215 e~q~~iA~L----~G~---~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
++++.+|+. .|. ++. ++.+++|++.++..++.++. ++||+|+++.-.++.+...++ ..|.+++.+
T Consensus 85 ~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~---~~gd~Vlv~~P~y~~~~~~~~----~~g~~v~~v 157 (410)
T PRK06290 85 EFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI---NPGDVTLMTVPGYPVTGTHTK----YYGGEVYNL 157 (410)
T ss_pred HHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC---CCCCEEEEeCCCCccHHHHHH----HcCCEEEEE
Confidence 344566665 354 444 68888888887766665552 379999999999988776654 458888776
Q ss_pred Cch----------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC----C----
Q 001769 287 DLK----------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK----P---- 343 (1016)
Q Consensus 287 d~~----------~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~alg~l~----~---- 343 (1016)
+++ ++++ +.+++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +........ +
T Consensus 158 ~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~D-EaY~~~~~~~~~~s~~~~ 236 (410)
T PRK06290 158 PLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQD-AAYAALTFDGKPLSFLSV 236 (410)
T ss_pred ecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEe-cchhhceeCCCCcChhcC
Confidence 652 2333 5567899999988 78999987 688888999999999984 322211000 1
Q ss_pred CCcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 344 pg~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
....+.+|+++|. |.||.| |=-.||+++.+++++.+. +-+.+.++++
T Consensus 237 ~~~~~~~I~i~SfSK~~g~~----GlRiG~ii~~~~l~~~l~----------------------------~~~~~~~~~~ 284 (410)
T PRK06290 237 PGAKEVGVEIHSLSKAYNMT----GWRLAFVVGNELIVKAFA----------------------------TVKDNNDSGQ 284 (410)
T ss_pred CCccccEEEEeechhhcCCc----hhheEeEEeCHHHHHHHH----------------------------HHHhccccCC
Confidence 1123467888887 887543 113589888777665441 1111122222
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC----------CHHHHHH
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA----------DAHAIAS 490 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~----------~~~~v~~ 490 (1016)
.... ..++..+... .+-++++.++..++.+++.+.|++.| +.+..+ .++ +-+..+ +..++.+
T Consensus 285 ~~~~--q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~f~--l~v~lp~~~~~~~~~~~~~~~~~ 358 (410)
T PRK06290 285 FIAI--QKAGIYALDH-PEITEKIREKYSRRLDKLVKILNEVG-FKAEMPGGTFY--LYVKAPKGTKSGIKFENAEEFSQ 358 (410)
T ss_pred cHHH--HHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCeeeE--EEEECCCccccCCCCCCHHHHHH
Confidence 1111 1222211111 22356777888888999999999987 776532 222 112332 2678999
Q ss_pred HHHHcCceee-cc--cCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001769 491 AAYKIEMNLR-VV--DSNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 491 ~L~~~GI~~~-~~--~~~~lris~te-~~t~edid~ll~aL~~ 529 (1016)
.|.++|+.+. +. .++.+||+++. ..++++-++++++|..
T Consensus 359 ~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~ 401 (410)
T PRK06290 359 YLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKR 401 (410)
T ss_pred HHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHH
Confidence 9998876442 21 24689999984 5688888999999864
No 442
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.26 E-value=3.1e-10 Score=132.73 Aligned_cols=228 Identities=14% Similarity=0.108 Sum_probs=145.7
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCc--eeeecCChH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~~--~~l~~~sGa-~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++...+.+++.+.+|.+. .++..++|+ +|...+ ++.+ . ++++.|++++..++.+...+...|.+
T Consensus 69 ~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~---~~~~---~--~~gd~vl~~~p~y~~y~~~~~~~~~~ 140 (402)
T PRK06107 69 VNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLA---LMAT---L--EAGDEVIIPAPYWVSYPDMVLANDGT 140 (402)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH---HHHh---c--CCCCEEEEecCCCcCHHHHHHHcCCE
Confidence 56888888888899988888753 345555554 444333 2222 1 35789999998888888777888888
Q ss_pred EEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHc-CcEEEEEccccc-cccC-
Q 001769 704 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDN-GGQVYMDGANMN-AQVG- 775 (1016)
Q Consensus 704 vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~-g~lv~vDga~~~-a~~~- 775 (1016)
++.++++. ++.+|+++++++++ +++++|++++|+ .+|.+. .++++|+++|+++ |+++++|.+... ....
T Consensus 141 ~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~ 217 (402)
T PRK06107 141 PVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE 217 (402)
T ss_pred EEEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC
Confidence 88888863 25689999999987 788999999985 688776 2578889999998 999999965421 0000
Q ss_pred -cCC-----CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccch
Q 001769 776 -LTS-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1016)
Q Consensus 776 -l~~-----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~ 849 (1016)
... ++..+--+++.|++|.|+.| |-.+|++++++++...+... ......+.+.
T Consensus 218 ~~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~s~--- 276 (402)
T PRK06107 218 PTPHLLAAAPELRDRVLVTNGVSKTYAMT----GWRIGYAAGPADLIAAINKL--------------QSQSSSCPSS--- 276 (402)
T ss_pred CCCCHHHhCcCccCCEEEEeccchhhcCc----ccceeeeecCHHHHHHHHHH--------------HHhcccCCCh---
Confidence 000 11111235677889999655 46689999887765543210 0000111111
Q ss_pred hhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 850 a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
....++..+|. -+..-+++..+...++.+++.+.|++
T Consensus 277 -~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~ 313 (402)
T PRK06107 277 -ISQAAAAAALN-GDQSFVTESVAVYKQRRDYALALLNA 313 (402)
T ss_pred -HHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11122223332 13334555566667777888888876
No 443
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.26 E-value=4.3e-09 Score=122.99 Aligned_cols=274 Identities=10% Similarity=0.114 Sum_probs=161.7
Q ss_pred HHHHHHHHHcC-----CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-
Q 001769 215 NFQTMIADLTG-----LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 288 (1016)
Q Consensus 215 e~q~~iA~L~G-----~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~- 288 (1016)
++++.+|++++ .+..++.+++|++.++..++.++. +++|+|+++.-.++.+...++ ..|++++.+++
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~---~~gd~v~i~~P~y~~~~~~~~----~~g~~v~~~~~~ 149 (401)
T TIGR01264 77 SAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALA---NAGQNILVPRPGFPLYETLAE----SMGIEVKLYNLL 149 (401)
T ss_pred HHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhC---CCCCEEEEeCCCChhHHHHHH----HcCCEEEEeecC
Confidence 45667777776 566789899999988877776663 378999999988887766543 45777776543
Q ss_pred ---------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEecccc-c--cC--CCCCCcc-c
Q 001769 289 ---------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLA-L--TI--LKPPGEL-G 348 (1016)
Q Consensus 289 ---------~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~a-l--g~--l~~pg~~-G 348 (1016)
+++++ +++++++|++.+| |.+|.+. ++++|+++|+++|++++++ +... + .- ..+...+ .
T Consensus 150 ~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~ 228 (401)
T TIGR01264 150 PDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIAD-EIYGDMVFSGATFEPLASLSS 228 (401)
T ss_pred CccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE-hhhhhhccCCcccccHHHcCC
Confidence 23444 5567888988888 6899886 5889999999999999994 2221 1 00 0000111 1
Q ss_pred -c-eEEEecC-ccccccCCCCCcceEEEEeeh--hhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 349 -A-DIVVGSA-QRFGVPMGYGGPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 349 -a-Divvgs~-k~lg~P~g~GGP~~Gfl~~~~--~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
. -|+++|. |.|+.| |=-.||+++.+ +..+.+ -+.+++.+. ...+.+
T Consensus 229 ~~~vi~~~SfSK~~~~~----GlRiG~iv~~~~~~~~~~~------------------------~~~~~~~~~-~~~~~~ 279 (401)
T TIGR01264 229 TVPILSCGGLAKRWLVP----GWRLGWIIIHDRRGILRDI------------------------RDGLVKLSQ-RILGPC 279 (401)
T ss_pred CCcEEEEccCcccCCCc----cceEEEEEecCcchhHHHH------------------------HHHHHHHhh-ccCCCC
Confidence 1 2566775 877644 22357877642 111000 000111110 011111
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEe---cC---CHHHHHHHHH-H
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVK---CA---DAHAIASAAY-K 494 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~---~~---~~~~v~~~L~-~ 494 (1016)
......++.+ +.-...+-+++..++..++.+++.+.|++++++....+ ..|--+.+. .+ ...++.+.|. +
T Consensus 280 ~~~q~a~~~~-l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 358 (401)
T TIGR01264 280 TIVQGALPSI-LLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAE 358 (401)
T ss_pred cHHHHHHHHH-HHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHh
Confidence 1111111111 22111334666777778888889999998833654321 222122221 12 2567778875 7
Q ss_pred cCceeecc----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 495 IEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 495 ~GI~~~~~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+||.+.+. .++.+|++++. ..+++++.++.|.
T Consensus 359 ~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~ 394 (401)
T TIGR01264 359 QSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQ 394 (401)
T ss_pred CCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 89987542 35889999984 4778877777775
No 444
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.26 E-value=2.9e-10 Score=130.25 Aligned_cols=165 Identities=19% Similarity=0.165 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCc-eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEc---CCCccccHHHHHhCCcEE
Q 001769 629 GYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP---VSAHGTNPATAAMCGMKI 704 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~-~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~---~saHg~~~~~a~~~G~~v 704 (1016)
|..+...++++.+++.+|.+. ..+..++|.+++.+++.++. +++++|+++ ...|.++...+++.|.++
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--------~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~ 122 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--------PPGRKVVHYLPEKPAHPSIPRSCKLAGAEY 122 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--------CCCCEEEECCCCCCCchhHHHHHHHcCCEE
Confidence 344677899999999999953 34667777776655554442 357888874 357877777788999886
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCCcccc--ccHHHHHHHHHHcCcEEEEEccccccccCc-C--CC
Q 001769 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL-T--SP 779 (1016)
Q Consensus 705 v~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~~~l-~--~p 779 (1016)
+.. .|+++++. . +++++|+++..+..|.+. .||++|+++|+++|+++++|.|+.....+. . ..
T Consensus 123 ~~~-------~~l~~l~~--~---~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 123 FES-------DELSELKK--I---DGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred ecc-------CCHHHHhh--C---cCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH
Confidence 432 25666432 2 567888887666677761 389999999999999999998875332111 1 11
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
..+++|+++.+++|++ .|+.+|++++++++++.+
T Consensus 191 ~~~~~divv~s~SKal------aG~r~G~v~~~~~li~~l 224 (346)
T TIGR03576 191 LDLGADLVVTSTDKLM------DGPRGGLLAGRKELVDKI 224 (346)
T ss_pred HHcCCcEEEeccchhc------cccceEEEEeCHHHHHHH
Confidence 2457899999999966 356789999998776654
No 445
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.25 E-value=4.4e-10 Score=127.91 Aligned_cols=207 Identities=16% Similarity=0.135 Sum_probs=134.6
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++++++++|.+...+..++|++..... +.+.+ .++ .|++++..|..+...+...|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~--~~~~l------~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYL--LPRLL------APG-RVLVLAPTYSEYARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHH--HHHHh------CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence 478889999999875555566665432222 22221 134 588888777777777889999998887
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccccc---HHHHHHHHHHcCcEEEEEccccccccCcCCCC----ccCCcE
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPG----YIGADV 786 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg----~~GaDi 786 (1016)
|++++++.++ ++++|++++|+ .+|.+. | +++|+++|+++|+++++|.+....... .... ..+-++
T Consensus 115 -d~~~l~~~~~----~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~i 187 (330)
T TIGR01140 115 -DLDRLPAALE----ELDVLVLCNPNNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFTPD-ASLAPQAARFPGLV 187 (330)
T ss_pred -CHHHHHhhcc----cCCEEEEeCCCCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccCCc-cchhhHhccCCCEE
Confidence 8899998884 46688899995 688887 5 777888999999999999875311111 0111 124568
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
++.|++|+|+.| |-++|++++++++...+.... ....+ +.....++..++.. .+
T Consensus 188 ~~~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~~--------------~~~~~------s~~~q~~~~~~l~~--~~ 241 (330)
T TIGR01140 188 VLRSLTKFFGLA----GLRLGFVVAHPALLARLREAL--------------GPWTV------NGPARAAGRAALAD--TA 241 (330)
T ss_pred EEEecchhhcCc----hhhhhheeCCHHHHHHHHhcC--------------CCCCc------hHHHHHHHHHHHhc--hH
Confidence 899999999543 455799999887665442110 00111 11223333444442 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 001769 867 GLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
-.+...++...+.+++.+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~ 264 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARL 264 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 23555677777888888888874
No 446
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.25 E-value=7.8e-10 Score=129.79 Aligned_cols=171 Identities=15% Similarity=0.193 Sum_probs=117.4
Q ss_pred hhhHHHHHHHHHHHHHHHhC--------CCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHH
Q 001769 627 AQGYQEMFNNLGEWLCTITG--------FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA 698 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G--------~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~ 698 (1016)
.+|..++...+.+++.+.++ ++...+..++|++. +..++++.+. .++++|+++.+.|..+...++
T Consensus 74 ~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~ 146 (412)
T PTZ00433 74 TVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSH--AILMALTALC-----DEGDNILVPAPGFPHYETVCK 146 (412)
T ss_pred CCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHH--HHHHHHHHhc-----CCCCEEEEccCCcccHHHHHH
Confidence 46776666666666655432 33344555555431 2333344321 357899999998888888889
Q ss_pred hCCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccccc
Q 001769 699 MCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1016)
Q Consensus 699 ~~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~a~ 773 (1016)
..|++++.+++++ ++.+|+++|+++++ +++++|++++|| .+|.+. .++++|+++|+++|+++++|.+...-.
T Consensus 147 ~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 147 AYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 9999999999864 36799999999987 689999999995 588754 368889999999999999998753111
Q ss_pred -cCcC-CC-Ccc---CCcEEEeCccccccCCCCCCCCeEEEEEE
Q 001769 774 -VGLT-SP-GYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1016)
Q Consensus 774 -~~l~-~p-g~~---GaDi~~~s~hK~~~~phg~GGPg~G~i~~ 811 (1016)
.+-. .+ ..+ ..-|++.|++|.|++| |-++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRlG~~i~ 263 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVP----GWRLGWLLL 263 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCC----CeeEEEEEE
Confidence 1100 01 111 1125677999998654 678999997
No 447
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.25 E-value=2.7e-10 Score=130.89 Aligned_cols=216 Identities=14% Similarity=0.115 Sum_probs=142.1
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 636 el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~-~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
++++.+++.+|++..++..+.|++. +..++++.+. +++ ++|+++.+.+..+...++..|++++.+|+++++.
T Consensus 64 ~Lr~aia~~~~~~~~~I~it~Gs~~--~i~~~~~~~~-----~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~ 136 (354)
T PRK04635 64 ELINAYSAYAGVAPEQILTSRGADE--AIELLIRAFC-----EPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQ 136 (354)
T ss_pred HHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCC
Confidence 6778888889998777777777642 3344444432 234 7899998877666677889999999999987788
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHc-CcEEEEEccccccccCcCCCCcc---CCc-EEE
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPGYI---GAD-VCH 788 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~-g~lv~vDga~~~a~~~l~~pg~~---GaD-i~~ 788 (1016)
+|++.++ ++ +++++|++++|| .+|.+. +.+++.++++.. ++++++|.+... +........+ ... +++
T Consensus 137 ~~~~~l~-~~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv~ 209 (354)
T PRK04635 137 LPLDYIE-QL----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVVL 209 (354)
T ss_pred CCHHHHH-hc----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEEE
Confidence 9999987 33 578999999995 689998 789999988763 789999987531 1100010011 111 567
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
.|++|+|++| |.++|++++++++.+.+-. .. ...+++ ......+.+++...|.+-+
T Consensus 210 ~S~SK~~~l~----GlRlG~~i~~~~~~~~l~~-~~-------------~~~~~~------~~~~~~a~~~l~~~~~~~~ 265 (354)
T PRK04635 210 RTLSKAFALA----GARCGFTLANEELIEILMR-VI-------------APYPVP------LPVSEIATQALSEAGLARM 265 (354)
T ss_pred echHHHhhhh----HHHHhhhhCCHHHHHHHHh-hc-------------CCCCCC------HHHHHHHHHHHhcccHHHH
Confidence 7999998544 5668999988776654311 00 000111 1222334455544444445
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 001769 869 TEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~~ 889 (1016)
++..+....+.+++.+.|++.
T Consensus 266 ~~~~~~~~~~r~~l~~~L~~~ 286 (354)
T PRK04635 266 KFQVLDLNAQGARLQAALSMY 286 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 555566667778889999873
No 448
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.25 E-value=4.2e-10 Score=132.66 Aligned_cols=249 Identities=18% Similarity=0.241 Sum_probs=161.7
Q ss_pred ccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-ceeeecCChHHHHHHHHHHHH
Q 001769 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1016)
Q Consensus 591 ~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~-~~~l~~~sGa~ae~a~l~air 669 (1016)
...+|+|.+.+..+...+....+.+..+.+ . +...++.+.|++++..+ ...++.+||+++++++++.+|
T Consensus 86 ~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~-~---------~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr 155 (442)
T TIGR03372 86 IFNVGHRNPNVIAAVENQLAKQPLHSQELL-D---------PLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK 155 (442)
T ss_pred hhhcCCCCHHHHHHHHHHHHhCCCcccccC-C---------HHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHH
Confidence 346788887777666665433322221111 1 12347888899988543 335778999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCccccHHHHHhCC------------cEEEEEcCCCCCCCCHHHHHHHHHc---CCCCEEE
Q 001769 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKGNINIEELRKAAEA---NRDNLST 733 (1016)
Q Consensus 670 ~~~~~~g~~~~~~Vl-v~~saHg~~~~~a~~~G------------~~vv~v~~d~~g~iD~~~L~~~i~~---~~~~t~~ 733 (1016)
.|...+| +.+|| ...+.||....+....| -.+..+|. .|++++++.+++ +.+++++
T Consensus 156 ~~t~~~g---r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAa 227 (442)
T TIGR03372 156 AYQSPRG---KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAA 227 (442)
T ss_pred HHHhhcC---CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEE
Confidence 8854332 34454 46678997655443221 12344554 378888887753 3467999
Q ss_pred EEEEcC-CCCcccccc----HHHHHHHHHHcCcEEEEEccccccccCcCCCCcc--------CCcEEEeCccccccCCCC
Q 001769 734 LMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHG 800 (1016)
Q Consensus 734 v~i~~P-n~~G~i~~d----i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~--------GaDi~~~s~hK~~~~phg 800 (1016)
|+++.- +..|++. + +++|.++|+++|+++|+|-+++ |+.+.|.+ -+|++++ .|.++
T Consensus 228 vIvEpv~g~gG~~~-p~~~yl~~l~~lc~~~g~llI~DEV~t----G~GRtG~~~a~e~~gv~PDivt~--gK~lg---- 296 (442)
T TIGR03372 228 IILEPIQGEGGVIL-PPEGYLPAVRALCDEFGALLILDEVQT----GMGRTGKMFACEHEGVQPDILCL--AKALG---- 296 (442)
T ss_pred EEEeCccCCCCccc-CCHHHHHHHHHHHHHcCCEEEEeeccc----CCCccccchhhhhcCCCCCeeee--hhhhc----
Confidence 999864 4567776 5 8999999999999999998764 33344433 2688864 47663
Q ss_pred CC-CCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHH
Q 001769 801 GG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (1016)
Q Consensus 801 ~G-GPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA 879 (1016)
+| -| +|.+++++++...+.... ....+++.|++..++++.+.|..+-.+++. +++....
T Consensus 297 ~G~~P-igavv~~~~i~~~~~~~~----------------~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~---~~~~~~G 356 (442)
T TIGR03372 297 GGVMP-IGATIATEAVFSVLFDNP----------------FLHTTTFGGNPLACAAALATINELLEKNLP---AQAAIKG 356 (442)
T ss_pred CCccc-ceEEEecHHHHHhhhccC----------------ccccCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHH
Confidence 33 25 455666776655442100 011234677888889999999988766644 4666788
Q ss_pred HHHHHHHhc
Q 001769 880 NYMAKRLEK 888 (1016)
Q Consensus 880 ~yla~~L~~ 888 (1016)
+|+.++|++
T Consensus 357 ~~l~~~L~~ 365 (442)
T TIGR03372 357 DFLLDGFQQ 365 (442)
T ss_pred HHHHHHHHH
Confidence 899998876
No 449
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.25 E-value=1.4e-09 Score=128.53 Aligned_cols=296 Identities=15% Similarity=0.105 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhcc------ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001769 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI------QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1016)
Q Consensus 213 i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~------~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1016)
..+|++.+|+++|.+. +.++++||+++..++.++.. .-++||+||++...|+++..++.. .|.+++.+
T Consensus 65 ~~~fe~~lA~~~g~~~--~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~----~G~~pv~v 138 (438)
T PRK15407 65 NDAFEKKLAEFLGVRY--ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQ----NGLVPVFV 138 (438)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHH----cCCEEEEE
Confidence 3468899999999874 78889999888877765510 113789999999999999988754 47777766
Q ss_pred Cc---------hhhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC---CCCcccceEEE
Q 001769 287 DL---------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVV 353 (1016)
Q Consensus 287 d~---------~~L~~-l~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~---~pg~~GaDivv 353 (1016)
|+ +++++ ++++|++|++.++ .|...|+++|.++|+++|++++++ ...++|... ..|.+| |+.+
T Consensus 139 dvd~~~~~id~~~le~~i~~~tkaVi~~~~--~G~p~dl~~I~~la~~~gi~vIeD-aa~a~G~~~~g~~~G~~g-d~~~ 214 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSPKTKAIMIAHT--LGNPFDLAAVKAFCDKHNLWLIED-NCDALGSTYDGRMTGTFG-DIAT 214 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCcCCeEEEEeCC--CCChhhHHHHHHHHHHCCCEEEEE-CccchhhhcCCeeeeccC-ceEE
Confidence 54 33555 7788999998874 688889999999999999999994 355666432 246677 9998
Q ss_pred ecC---ccccccCCCCCcceEEEEeehh-hhhcCCC-ceEeeeec-CCCCc-----ceeeecccccc--cccccccCCcc
Q 001769 354 GSA---QRFGVPMGYGGPHAAFLATSQE-YKRMMPG-RIVGVSID-SSGKP-----ALRVAMQTREQ--HIRRDKATSNI 420 (1016)
Q Consensus 354 gs~---k~lg~P~g~GGP~~Gfl~~~~~-l~~~lpg-rivG~s~d-~~g~~-----~~~l~lqtreq--hiRRekaTsni 420 (1016)
+|. |.+. . |+| |++.++++ +.+.+.- +-.|.... ..++. .+...+..-.. ..++. -..+
T Consensus 215 fSf~~~k~~~----~-geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 286 (438)
T PRK15407 215 LSFYPAHHIT----M-GEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYT--YSHL 286 (438)
T ss_pred EeCCCCCCcc----c-cCc-eEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccc--cccc
Confidence 886 4342 2 333 78888764 3332210 11121000 00000 00000000000 00000 0001
Q ss_pred chhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC-eEEcC-C----CCccEEEEecCC-----HHHHH
Q 001769 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT-VEVQG-L----PFFDTVKVKCAD-----AHAIA 489 (1016)
Q Consensus 421 cT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~-~~l~~-~----~~~~~v~i~~~~-----~~~v~ 489 (1016)
..+.-+.-+.|++-+.- -+.++++.++-+++++++.+.|.++++ +.+.. + +....+.+.++. -.++.
T Consensus 287 G~n~rmsel~AAig~~q--L~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~ 364 (438)
T PRK15407 287 GYNLKITDMQAAIGLAQ--LEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELV 364 (438)
T ss_pred ccccCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHH
Confidence 11112222334442222 234566777778899999999988742 32221 1 111123343321 57899
Q ss_pred HHHHHcCceeeccc----------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 490 SAAYKIEMNLRVVD----------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 490 ~~L~~~GI~~~~~~----------------------------~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.|.++||..+... ...+.+-++..-|++|++.++++|.
T Consensus 365 ~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~ 431 (438)
T PRK15407 365 KYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIE 431 (438)
T ss_pred HHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHH
Confidence 99999999543110 1224444455557888888888875
No 450
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.25 E-value=2.5e-09 Score=122.32 Aligned_cols=262 Identities=16% Similarity=0.160 Sum_probs=165.9
Q ss_pred HHHHHHHHHcCCCC-ccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCchhhhc
Q 001769 215 NFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY 293 (1016)
Q Consensus 215 e~q~~iA~L~G~~~-anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~~L~~ 293 (1016)
++++.+|+.+|.+. .++.+++|++.++..+.. + . ++++ |++..-.++.+...++ ..|++++.++.++ +.
T Consensus 57 ~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~-~--~~g~-v~v~~P~y~~y~~~~~----~~g~~~~~v~~~~-~~ 126 (339)
T PRK06959 57 GLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-L-L--PRGR-VGIAPLAYSEYAPAFA----RHGHRVVPLDEAA-DT 126 (339)
T ss_pred HHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-h-c--CCCe-EEEcCCCcHHHHHHHH----HCCCEEEeecccc-hh
Confidence 45679999999974 789899999887765432 2 2 2455 8888888888877764 3588888887654 22
Q ss_pred cCCCEeEEEEEcC-CCCeeeccHHHHHHH---HHhCCcEEEEEecccc-ccCCCCCCcc-cce--EEEecC-ccccccCC
Q 001769 294 KSGDVCGVLVQYP-GTEGEVLDYGDFIKN---AHANGVKVVMATDLLA-LTILKPPGEL-GAD--IVVGSA-QRFGVPMG 364 (1016)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~dl~eI~~l---ah~~GalviV~a~~~a-lg~l~~pg~~-GaD--ivvgs~-k~lg~P~g 364 (1016)
+.+.++.+++.+| |.+|.+.+.+++.++ +.+++.+++++ +... +....+...+ .-| |++.|. |.||.|
T Consensus 127 ~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~D-Eay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~-- 203 (339)
T PRK06959 127 LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVD-EAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLA-- 203 (339)
T ss_pred ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCCccCCCcccchhccCCCCEEEEecChhhcCCc--
Confidence 3345678888998 689999876655554 55778888883 3322 1100111111 112 667776 888654
Q ss_pred CCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHH
Q 001769 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1016)
Q Consensus 365 ~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~ 444 (1016)
|=-.||+.+.+++++.+-- -+...++.+ . +..++.. .+...+=++
T Consensus 204 --GlRiGy~v~~~~li~~l~~----------------------------~~~~~~vs~-~---~q~a~~~-~L~~~~~~~ 248 (339)
T PRK06959 204 --GVRAGFVLAAPALLAALRD----------------------------ALGAWTVSG-P---ARHAVRA-AFADAAWQA 248 (339)
T ss_pred --chheEEEecCHHHHHHHHH----------------------------hcCCCCCcH-H---HHHHHHH-HhCcHHHHH
Confidence 2235899888877766510 011112211 1 1112211 111112245
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeccc-CCeEEEEeccCCCHHHHHHH
Q 001769 445 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKL 523 (1016)
Q Consensus 445 ~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~-~~~lris~te~~t~edid~l 523 (1016)
+..+++.+..+++.+.|+++| +++.....| +.++.+.+.++.+.|.++||.++... .+++||+++ .+.+|.++|
T Consensus 249 ~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~f--~~~~~~~~~~l~~~l~~~GI~vr~~~~~~~lRisi~--~~~~e~~~l 323 (339)
T PRK06959 249 AMRERLAADGARLAALLRAHG-FAVHATPLF--SWTDDPRAAALHAALARRGIWTRYFAPPPSVRFGLP--ADEAEWQRL 323 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CCccCcceE--EEEeCCCHHHHHHHHHhCCeEEEECCCCCeEEEECC--CCHHHHHHH
Confidence 667777888889999999987 776532222 22344457789999999999997653 478999974 366799999
Q ss_pred HHHHhC
Q 001769 524 FIVFAG 529 (1016)
Q Consensus 524 l~aL~~ 529 (1016)
+++|..
T Consensus 324 ~~al~~ 329 (339)
T PRK06959 324 EDALAE 329 (339)
T ss_pred HHHHHH
Confidence 999963
No 451
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.24 E-value=2.1e-09 Score=124.28 Aligned_cols=274 Identities=13% Similarity=0.110 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccC----CCCEEEEcCC-CCHHHHHHHHHhhc--------C
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG----KKKTFIIASN-CHPQTIDICITRAD--------G 278 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~----~gd~Vlvs~~-~Hps~~~~l~~~a~--------~ 278 (1016)
...++++.+++++|.+ ++.++.||+.+.++++.+.+...+ ++++|++.+. -|......+..-+. .
T Consensus 70 ~~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00707 70 PQEELAEKLVEHSGAD--RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEP 147 (379)
T ss_pred HHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCC
Confidence 4557789999999987 588889999888887765532111 2688887764 44433333211110 1
Q ss_pred CCeEEEEe---Cchhhhc-cCCCEeEEEEEcCC-CCeeec----cHHHHHHHHHhCCcEEEEEecccc-ccCCCC---CC
Q 001769 279 FDIKVVVS---DLKDIDY-KSGDVCGVLVQYPG-TEGEVL----DYGDFIKNAHANGVKVVMATDLLA-LTILKP---PG 345 (1016)
Q Consensus 279 ~gi~v~~v---d~~~L~~-l~~~t~~V~v~~pn-~~G~i~----dl~eI~~lah~~GalviV~a~~~a-lg~l~~---pg 345 (1016)
...++..+ |++++++ +++++++|++..++ +.|.+. ++++|.++|+++|++++++ +..+ ++.... ..
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~D-e~~~~~~~~g~~~~~~ 226 (379)
T TIGR00707 148 LVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFD-EVQTGIGRTGKFFAYE 226 (379)
T ss_pred CCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEe-ccccCCCccchhhhHH
Confidence 11122222 4566766 77788888886544 455432 4899999999999999984 3332 321111 11
Q ss_pred cc--cceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 346 EL--GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 346 ~~--GaDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
.+ ..|+++. +|.|+ | |-..|++++++++++.+... .. ++ ..+.+
T Consensus 227 ~~~~~~d~~t~-sK~~~-~----G~riG~~~~~~~~~~~~~~~----------~~-----------------~~-~~~~~ 272 (379)
T TIGR00707 227 HYGIEPDIITL-AKGLG-G----GVPIGATLAKEEVAEAFTPG----------DH-----------------GS-TFGGN 272 (379)
T ss_pred hcCCCCCEEEE-ccccc-C----CcccEEEEEcHHHHhhhcCC----------CC-----------------CC-CCCCC
Confidence 22 3466543 48885 2 22368888888877665210 00 00 01111
Q ss_pred h-HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC---CCccEEEEecCC-HHHHHHHHHHcCce
Q 001769 424 Q-ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD-AHAIASAAYKIEMN 498 (1016)
Q Consensus 424 ~-~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~---~~~~~v~i~~~~-~~~v~~~L~~~GI~ 498 (1016)
. ...+..+++ ..+.. .++.++..++.++++++|++++ ...... ..-.-+.+.++. +.++.+.|.++||.
T Consensus 273 ~~~~~aa~aaL--~~~~~---~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~ 346 (379)
T TIGR00707 273 PLACAAALAVL--EVIEK---ERLLENVKEKGDYFKERLEELG-KNYPNKEVRGKGLMLGIELEAPCKDIVKKALEKGLL 346 (379)
T ss_pred HHHHHHHHHHH--HHHHh---hhHHHHHHHHHHHHHHHHHHHH-hhCCCCccccCceEEEEEecCcHHHHHHHHHHCCcE
Confidence 1 122222222 33322 2456777888888888888764 322110 111123444443 77899999999999
Q ss_pred eecccCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 499 ~~~~~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.+...+.+|++++..+|.++++++++.|.
T Consensus 347 v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 347 VNCAGPKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred EeeCCCCEEEEECCCcCCHHHHHHHHHHHH
Confidence 877555789999999999999999999986
No 452
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=5.2e-10 Score=128.60 Aligned_cols=169 Identities=16% Similarity=0.159 Sum_probs=119.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++.+++.+|.+...+..++|++. +...+++.+. ++++.|+++++.++.+...+...|.+++.++++ ++.
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~ 138 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDE--VIQMISRALL-----NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGG 138 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHH--HHHHHHHHHh-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCC
Confidence 35777888888887655666666542 2334444432 256899999887766666678899999999997 677
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHH--cCcEEEEEccccccc-cCcCCC-----CccCCc
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ-VGLTSP-----GYIGAD 785 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~--~g~lv~vDga~~~a~-~~l~~p-----g~~GaD 785 (1016)
+|+++++++++ +++++|++++|+ .+|.+. +.++|.++++. +|+++++|.+...-. .+...+ ...+-.
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 139 HDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred cCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 99999999887 788999999995 689987 78898888887 589999998753111 110001 122345
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
+++.|+.|.|++| |..+|++++++++.+.+
T Consensus 215 i~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~ 244 (359)
T PRK03158 215 IVLRTFSKAYGLA----ALRVGYGIASEELIEKL 244 (359)
T ss_pred EEEEechHhhcCc----chhhehhcCCHHHHHHH
Confidence 7778999998543 45679999887665543
No 453
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.24 E-value=1.1e-10 Score=133.89 Aligned_cols=222 Identities=11% Similarity=0.044 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHhCCCc---eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-Cccc-cHHHHHhCCcEE
Q 001769 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGT-NPATAAMCGMKI 704 (1016)
Q Consensus 630 ~~e~~~el~~~laeL~G~~~---~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~s-aHg~-~~~~a~~~G~~v 704 (1016)
+.+++.++++.+++++|.+. +.++.+||+.|.++++..+- .+++++++... .+|- ....++..|. +
T Consensus 35 f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--------~~~~~~l~i~~G~fg~r~~~~a~~~g~-~ 105 (349)
T TIGR01364 35 FEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--------AEGKVADYIVTGAWSKKAAKEAKKYGV-V 105 (349)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCC-c
Confidence 55788899999999999742 33555667776665554432 13445555433 1221 1234677898 7
Q ss_pred EEEcCCCCC----CCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC
Q 001769 705 VSVGTDAKG----NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1016)
Q Consensus 705 v~v~~d~~g----~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p 779 (1016)
+.+..++.+ .+|+++++ ++ +++++|.+++- |++|+.. + ++++.+|++++||+++.++...+ ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~-~-----~l~~~~~~l~iVDavss~g~~~i-d~ 173 (349)
T TIGR01364 106 NVVASGKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEF-R-----ELPDVKNAPLVADMSSNILSRPI-DV 173 (349)
T ss_pred EEEeccccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEec-c-----eecccCCCeEEEEccccccCccC-CH
Confidence 777765333 45666655 33 67888888874 6789986 4 66777899999999986554332 23
Q ss_pred CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCC--CC-CcCCCCCCccCCccchhhHHHHH
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP--AP-EKSQPLGTIAAAPWGSALILPIS 856 (1016)
Q Consensus 780 g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~--~r-e~~~~~g~i~s~~~G~a~~~~~a 856 (1016)
.+ .|++++++||+|+ .||+|++++++++.+.++...... ..+. .. .....|.++. .+...
T Consensus 174 ~~--~d~~~~ssqK~lg------P~Glg~l~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Tp~~~--------~i~al 236 (349)
T TIGR01364 174 SK--FGLIYAGAQKNIG------PAGLTVVIVRKDLLGRASRITPSM-LNYKIHAENDSMYNTPPTF--------AIYVS 236 (349)
T ss_pred HH--ccEEEEecccccC------CCceEEEEECHHHHhhcccCCCCc-chHHHHHhcCCCCCCCcHH--------HHHHH
Confidence 33 4699999999884 468999999998776554321110 0010 00 0001122221 11222
Q ss_pred HHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcc
Q 001769 857 YTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 857 ~a~l~~lG~e-Gl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
.+.|.++-.+ |+.++.+++..+++++.++|++.
T Consensus 237 ~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~ 270 (349)
T TIGR01364 237 GLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS 270 (349)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3455555566 69999999999999999999984
No 454
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=2e-09 Score=124.37 Aligned_cols=264 Identities=17% Similarity=0.148 Sum_probs=167.4
Q ss_pred HHHHHHHHHc------CCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 215 NFQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 215 e~q~~iA~L~------G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
++++.+|+.+ +.++.++.+++|++.++..++.++. ++||+|+++.-.++.+...++ ..|++++.++.
T Consensus 69 ~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~---~~gd~v~v~~P~y~~~~~~~~----~~g~~~~~~~~ 141 (368)
T PRK03317 69 ALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFG---GPGRTALGFVPSYSMHPIIAR----GTHTEWVEGPR 141 (368)
T ss_pred HHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhc---CCCCEEEEeCCChHHHHHHHH----hcCCeeEEccc
Confidence 4556777777 4567789889999888777666653 378999999988888776643 45777766543
Q ss_pred --------hhhhc-cC-CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecccc-ccCCCCCC------cccce
Q 001769 289 --------KDIDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLA-LTILKPPG------ELGAD 350 (1016)
Q Consensus 289 --------~~L~~-l~-~~t~~V~v~~p-n~~G~i~dl~eI~~lah~~GalviV~a~~~a-lg~l~~pg------~~GaD 350 (1016)
+++++ +. .++++|++.+| |.+|.+.+.+++.++++.++++++++ +..+ ++.-..+. ...--
T Consensus 142 ~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~D-E~y~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T PRK03317 142 AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVD-EAYAEFRRSGTPSALTLLPEYPRL 220 (368)
T ss_pred CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEe-CCchhhcccCCcCHHHHHHhCCCE
Confidence 33444 43 46788888888 67999999999999999999888883 4432 21111111 11212
Q ss_pred EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHH
Q 001769 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1016)
Q Consensus 351 ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~ 429 (1016)
|+++|. |.||.| |=-.|++.+++++++.+.. .+.+.++ +.....+.
T Consensus 221 i~~~SfSK~~g~~----GlRiG~~~~~~~~~~~l~~----------------------------~~~~~~~-s~~~~~a~ 267 (368)
T PRK03317 221 VVSRTMSKAFAFA----GGRLGYLAAAPAVVDALRL----------------------------VRLPYHL-SAVTQAAA 267 (368)
T ss_pred EEEEechhhhccc----hhhhhhhhCCHHHHHHHHh----------------------------cCCCCCC-CHHHHHHH
Confidence 566675 888643 1124788888777665510 0001111 11111111
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC-CCccEEEE-ecCCHHHHHHHHHHcCceeeccc-CCe
Q 001769 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKV-KCADAHAIASAAYKIEMNLRVVD-SNT 506 (1016)
Q Consensus 430 ~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~-~~~~~v~i-~~~~~~~v~~~L~~~GI~~~~~~-~~~ 506 (1016)
.+++ . ..+.+.+..+++.++.+++.+.|++.| +++..+ ..| +.+ ..+...++.+.|.++||.+.... ++.
T Consensus 268 ~~~l--~--~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~ 340 (368)
T PRK03317 268 RAAL--R--HADELLASVAALRAERDRVVAWLRELG-LRVAPSDANF--VLFGRFADRHAVWQGLLDRGVLIRDVGIPGW 340 (368)
T ss_pred HHHh--h--CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCCCCcE--EEEeccCCHHHHHHHHHHCCEEEEeCCCCCe
Confidence 1111 1 122334444566777778888998887 776532 112 222 33347789999999999987653 578
Q ss_pred EEEEeccCCCHHHHHHHHHHHhC
Q 001769 507 VTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 507 lris~te~~t~edid~ll~aL~~ 529 (1016)
+|++++ +.+++++++++|..
T Consensus 341 iRi~~~---~~~~~~~~~~~l~~ 360 (368)
T PRK03317 341 LRVTIG---TPEENDAFLAALAE 360 (368)
T ss_pred EEEecC---CHHHHHHHHHHHHH
Confidence 999976 77899999999863
No 455
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.24 E-value=4.5e-10 Score=130.67 Aligned_cols=251 Identities=18% Similarity=0.172 Sum_probs=153.0
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..||++.+.+..+...+......+.+ .+. .+...++.++|+++++.+. .++.+||++|++++++++|.|
T Consensus 43 ~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~--------~~~~~~la~~l~~~~~~~~-v~~~~sGseA~~~al~~ar~~ 111 (389)
T PRK01278 43 NSLGHAHPHLVEALKEQAEKLWHVSN--LYR--------IPEQERLAERLVENSFADK-VFFTNSGAEAVECAIKTARRY 111 (389)
T ss_pred ccCCCCCHHHHHHHHHHHHhcCcccc--ccC--------ChHHHHHHHHHHhhCCCCE-EEEcCCcHHHHHHHHHHHHHH
Confidence 46787766665555444322111111 111 1233478889999887664 466789999999999999988
Q ss_pred HHhcCCCCCCEEEE-cCCCccccHHHHHhCCcEEEE---EcCCCCC----CCCHHHHHHHHHcCCCCEEEEEEEcCC-CC
Q 001769 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---VGTDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1016)
Q Consensus 672 ~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G~~vv~---v~~d~~g----~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~ 742 (1016)
+..+|+..+++||+ ....||.........|..... .+..++. ..|+++++++++ +++++|+++.++ ..
T Consensus 112 ~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~ 188 (389)
T PRK01278 112 HYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEG 188 (389)
T ss_pred HHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCC
Confidence 76666544556766 456777765554433321111 0111111 158999999997 789999999664 44
Q ss_pred cccc---ccHHHHHHHHHHcCcEEEEEccccccccCcCCCC--------ccCCcEEEeCccccccCCCCCCCCeEEEEEE
Q 001769 743 GVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1016)
Q Consensus 743 G~i~---~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg--------~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~ 811 (1016)
|.+. .++++|.++|+++|+++++|.++. ++ .+.+ ....|+++ +.|.++ +|..+|.+++
T Consensus 189 G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~---g~~g~~~~~~~~~~~pdi~t--~sK~l~-----~G~~ig~~~~ 257 (389)
T PRK01278 189 GIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GM---GRTGKLFAHEWAGVTPDIMA--VAKGIG-----GGFPLGACLA 257 (389)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CC---CcCCcceeecccCCCCCEEE--Eehhcc-----CCcceEEEEE
Confidence 5222 379999999999999999998764 22 1211 12356654 468874 3455888888
Q ss_pred cccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 812 ~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
++++.+.+.... ... ++.++...++++.+.|..+-.+++ .++...+.++++++|++
T Consensus 258 ~~~~~~~~~~~~--------------~~~----t~~~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~l~~ 313 (389)
T PRK01278 258 TEEAAKGMTPGT--------------HGS----TYGGNPLAMAVGNAVLDVILAPGF---LDNVQRMGLYLKQKLEG 313 (389)
T ss_pred cHHHHhccCCCC--------------CCC----CCCccHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHHH
Confidence 877665442100 001 122345556666677776633333 34566677788888875
No 456
>PRK09265 aminotransferase AlaT; Validated
Probab=99.24 E-value=6.4e-09 Score=121.70 Aligned_cols=326 Identities=11% Similarity=0.131 Sum_probs=179.0
Q ss_pred HHHHHHHHHHhcCCCccccccCCCC---CCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHc---
Q 001769 151 SQMIEHMQKLASMNKVYKSFIGMGY---YNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLT--- 224 (1016)
Q Consensus 151 ~e~~~~l~~la~~n~~~~~~lG~g~---y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~--- 224 (1016)
.++.+..+++...+....+| +.|. ++...|+.+.+++.+.-.-...|.+. +|. .++++.+|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~i~l-~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~-----~G~----~~lr~~ia~~~~~~ 88 (404)
T PRK09265 19 GPVLKEAKRLEEEGHKILKL-NIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDS-----KGL----FSARKAIMQYYQQK 88 (404)
T ss_pred HHHHHHHHHHHHcCCCeEEe-cCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCC-----CCc----HHHHHHHHHHHhcc
Confidence 34455555554444433332 4431 23336666655665432212334432 332 24556777776
Q ss_pred ---CCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC----------chhh
Q 001769 225 ---GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD----------LKDI 291 (1016)
Q Consensus 225 ---G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd----------~~~L 291 (1016)
+.++.++.+.+|++.++..++.++. ++||+|++++-.|+.+...++. .|.+++.++ ++++
T Consensus 89 ~~~~~~~~~i~~t~G~~~~l~~~~~~~~---~~gd~Vlv~~p~y~~~~~~~~~----~g~~~v~~~~~~~~~~~~d~~~l 161 (404)
T PRK09265 89 GIPDVDVDDIYIGNGVSELIVMAMQALL---NNGDEVLVPAPDYPLWTAAVSL----SGGKPVHYLCDEEAGWFPDLDDI 161 (404)
T ss_pred CCCCCCcccEEEeCChHHHHHHHHHHhC---CCCCEEEEeCCCCcChHHHHHH----cCCEEEEEecccccCCCCCHHHH
Confidence 6778889889999887776665552 3799999999999987777643 355554432 2345
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c---cC-CCCCCcc--cce-EEEecC-c
Q 001769 292 DY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L---TI-LKPPGEL--GAD-IVVGSA-Q 357 (1016)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-l---g~-l~~pg~~--GaD-ivvgs~-k 357 (1016)
++ +++++++|++.+| |.+|.+.+ +++|+++|+++|++++++ +... + +. ..+...+ ... |+++|. |
T Consensus 162 ~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 240 (404)
T PRK09265 162 RSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFAD-EIYDKILYDGAVHISIASLAPDLLCVTFNGLSK 240 (404)
T ss_pred HHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEe-hhhhhccCCCCCcCCHHHcCCCceEEEEecchh
Confidence 55 6678899999998 68999888 899999999999999984 2221 1 10 0011111 122 345664 7
Q ss_pred cccccCCCCCcceEEEEee--hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHH
Q 001769 358 RFGVPMGYGGPHAAFLATS--QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1016)
Q Consensus 358 ~lg~P~g~GGP~~Gfl~~~--~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~ 435 (1016)
.|+.| |=-.||+++. +++.+.+ . +.++.- ...+.|++.....++.++
T Consensus 241 ~~~~p----GlRiG~~v~~~~~~~~~~~--------~----------------~~~~~~-~~~~~~~~~~~q~~~~~~-- 289 (404)
T PRK09265 241 AYRVA----GFRVGWMVLSGPKKHAKGY--------I----------------EGLDML-ASMRLCANVPAQHAIQTA-- 289 (404)
T ss_pred hccCc----ccceEEEEEeCchHHHHHH--------H----------------HHHHHH-hccccCCCcHHHHHHHHH--
Confidence 77543 1124777752 2211111 0 000000 011122222111111111
Q ss_pred HHhCcccHHHH---HHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEec-----CC-HHHHHHHHHHcCceeecc--
Q 001769 436 VYHGPEGLKTI---AQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKC-----AD-AHAIASAAYKIEMNLRVV-- 502 (1016)
Q Consensus 436 ~~~g~~Gl~~i---a~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~-----~~-~~~v~~~L~~~GI~~~~~-- 502 (1016)
+...+.++++ .++..++.+++.+.|++++++++..+ .++--+.+.. .. ...+.+.|.++||.+.+.
T Consensus 290 -l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~ 368 (404)
T PRK09265 290 -LGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTG 368 (404)
T ss_pred -hcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchh
Confidence 1111222222 23556667788888888733665432 2221122221 12 345777788899987432
Q ss_pred ----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 ----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 ----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+|+++. .+.+++++.++.|+
T Consensus 369 F~~~~~~~~Ri~~~--~~~e~l~~~l~rl~ 396 (404)
T PRK09265 369 FNWPEPDHFRIVTL--PRVDDLEEAIGRIG 396 (404)
T ss_pred hCCCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence 2478999995 67888888888875
No 457
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.24 E-value=4.1e-09 Score=121.21 Aligned_cols=296 Identities=16% Similarity=0.202 Sum_probs=180.2
Q ss_pred CCCCCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccc
Q 001769 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1016)
Q Consensus 172 G~g~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~ 251 (1016)
+.|.-+...|+.+.+.+.+.....+.|.+ .+ ..++++.+|++++.++.++.+++|++.+...++.++
T Consensus 25 ~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~------~~----~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~--- 91 (354)
T PRK06358 25 SANINPLGVPESLKQAITENLDKLVEYPD------PD----YLELRKRIASFEQLDLENVILGNGATELIFNIVKVT--- 91 (354)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhhhcCCC------cc----HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh---
Confidence 45544445566665555543333344432 11 246778999999999999999999998776665554
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHH
Q 001769 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGD 317 (1016)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~---------~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~e 317 (1016)
.+++|++++-.++.+...++ ..|++++.++.+ ++.+ +.+++++|++.+| |.+|.+.+ +.+
T Consensus 92 --~~~~v~i~~P~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 92 --KPKKVLILAPTFAEYERALK----AFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred --CCCcEEEecCChHHHHHHHH----HcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHH
Confidence 23579999999888776653 357777776542 1222 4556888888888 68998875 888
Q ss_pred HHHHHHhCCcEEEEEecccc-ccCCC---CC----CcccceEEEecC-ccccccCCCCCcceEEEEee-hhhhhcCCCce
Q 001769 318 FIKNAHANGVKVVMATDLLA-LTILK---PP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRI 387 (1016)
Q Consensus 318 I~~lah~~GalviV~a~~~a-lg~l~---~p----g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~-~~l~~~lpgri 387 (1016)
|+++|+++|++++++. ... +..-. ++ ....==|+++|. |.||.| |=-.||+.+. +.+++.+-
T Consensus 166 l~~~a~~~~~~ii~De-~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~----G~RiG~lv~~~~~~~~~~~--- 237 (354)
T PRK06358 166 ILDKCEKRNIYLIIDE-AFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIP----GLRLGYGLTSNKNLAEKLL--- 237 (354)
T ss_pred HHHHHHhcCCEEEEeC-cccccCCCccchhHHHhccCCCCEEEEEechhhccCc----chhheeeecCCHHHHHHHH---
Confidence 8999999999999942 211 11000 00 011111566776 888644 2245888764 44444330
Q ss_pred EeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCe
Q 001769 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1016)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~ 467 (1016)
+-+....+ ..+ +..++.. .+...+=+++..+...++.+++.+.|++++++
T Consensus 238 -------------------------~~~~~~~~---~~~-~q~~~~~-~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 287 (354)
T PRK06358 238 -------------------------QMREPWSI---NTF-ADLAGQT-LLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGI 287 (354)
T ss_pred -------------------------HhCCCCcc---hHH-HHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 00000111 111 1111110 11111123566677778888999999887436
Q ss_pred EEcCCCCccEEEEecCCHHHHHHHHHHcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 468 EVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 468 ~l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
++..+. -.=+.++.+...++.+.|.++||.+... .++.+|+++. +.++.++|+++|.
T Consensus 288 ~~~~~~-g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~---~~~~~~~l~~~l~ 350 (354)
T PRK06358 288 KVYKPS-VNFIFFKLEKPIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK---SREDNKKLLKALE 350 (354)
T ss_pred EEcCCc-ceEEEEEcCchHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHHHHH
Confidence 665321 1113355555678999999999987653 1357999976 7888999998885
No 458
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.23 E-value=4.9e-09 Score=122.19 Aligned_cols=268 Identities=11% Similarity=0.110 Sum_probs=162.8
Q ss_pred HHHHHHHHHc----CCC---CccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 215 NFQTMIADLT----GLP---MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 215 e~q~~iA~L~----G~~---~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
++++.+++.+ |.. ..++.+++|+|+++..++.++. +++|+|++++..|+.+...++ ..|++++.++
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~---~~gd~vl~~~p~y~~~~~~~~----~~g~~~~~~~ 143 (391)
T PRK07309 71 ELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAIL---EPGDKVLLPAPAYPGYEPIVN----LVGAEIVEID 143 (391)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEeCCCCcchHHHHH----HcCCEEEEEe
Confidence 3455666655 332 3468889999998888777652 379999999999988776654 3577777765
Q ss_pred c---------hhhhc-cC---CCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCC-C----CCC
Q 001769 288 L---------KDIDY-KS---GDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL-K----PPG 345 (1016)
Q Consensus 288 ~---------~~L~~-l~---~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l-~----~pg 345 (1016)
. +++++ ++ +++++|++++| |.+|.+- ++++|+++|+++|++++++. ..+--.. . +..
T Consensus 144 ~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~-~y~~~~~~~~~~~~~~ 222 (391)
T PRK07309 144 TTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDE-VYSELTYTGEPHVSIA 222 (391)
T ss_pred cCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEc-cccceeeCCCCCCCHH
Confidence 4 23444 43 36899999988 6899875 48999999999999999943 2221111 1 111
Q ss_pred cccc--eEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 346 ELGA--DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 346 ~~Ga--Divvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
++.. -|+++|. |.||.| |=-.|++++++++++.+-- ....+..|+
T Consensus 223 ~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~~~~~~~----------------------------~~~~~~~~~ 270 (391)
T PRK07309 223 EYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEFTAQLIK----------------------------SHQYLVTAA 270 (391)
T ss_pred HhccCCEEEEecChhhccCc----cceeEEEEeCHHHHHHHHH----------------------------HHhhcccCC
Confidence 1112 2777776 877654 2236899988887665410 000011122
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC-----CHHHHHHHHH-H
Q 001769 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA-----DAHAIASAAY-K 494 (1016)
Q Consensus 423 ~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~-----~~~~v~~~L~-~ 494 (1016)
+......++. ++. .+..-...+.++..++.+++.+.|++.| +++..+ .++ +.++.+ ...++.++|. +
T Consensus 271 ~~~~q~~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg~~--~~~~l~~~~~~~~~~~~~~l~~~ 345 (391)
T PRK07309 271 TTMAQFAAVE-ALT-NGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGAFY--IFAKIPAGYNQDSFKFLQDFARK 345 (391)
T ss_pred ChHHHHHHHH-HHh-CChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEE--EEEECCCCCCCCHHHHHHHHHHh
Confidence 2221111111 111 1111123445566677788999998887 776532 122 223433 1567887654 6
Q ss_pred cCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 495 IEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 495 ~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
+||.+.+. .++.+|+++.. +.+++++.++.|+.
T Consensus 346 ~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~ 384 (391)
T PRK07309 346 KAVAFIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKE 384 (391)
T ss_pred CCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 89987432 24689999985 57888888888853
No 459
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.23 E-value=9.3e-10 Score=128.60 Aligned_cols=205 Identities=17% Similarity=0.213 Sum_probs=127.4
Q ss_pred ccccccccccCC----CChhhhhcccc----cccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCceeeecCChH
Q 001769 589 HSMIPLGSCTMK----LNATTEMMPVT----WPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGA 658 (1016)
Q Consensus 589 ~~~i~LGs~t~~----~~~~~~~~~~~----~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G--~~~~~l~~~sGa 658 (1016)
+.++.|+.|.+. +++........ ... .+..|.| .+|..++...+.+++.+ .| .+...+..++|+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~---~~g~~~lr~aia~~~~~-~~~~~~~~~i~~t~G~ 104 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG--KYNGYAP---TVGALSAREAIASYYHN-PDGPIEADDVVLCSGC 104 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhcc--CCCCCCC---CCCCHHHHHHHHHHHhh-cCCCCCHHHEEECcCh
Confidence 456888887763 43332221110 111 1223444 45665554444444433 12 333345445554
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEE
Q 001769 659 AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMV 736 (1016)
Q Consensus 659 ~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~--~g~iD~~~L~~~i~~~~~~t~~v~i 736 (1016)
+. +..++++.+. .++++|+++.+.+..+...+...|++++.++++. ++.+|+++++++++ +++++|++
T Consensus 105 ~~--al~~~~~~l~-----~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~ 174 (401)
T TIGR01264 105 SH--AIEMCIAALA-----NAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID---EKTAALIV 174 (401)
T ss_pred HH--HHHHHHHHhC-----CCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc---cCceEEEE
Confidence 31 3333444331 2567899998877777777889999999998864 36799999999887 67899999
Q ss_pred EcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccCc-CCC-CccCC---cEEEeCccccccCCCCCCCCeEE
Q 001769 737 TYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL-TSP-GYIGA---DVCHLNLHKTFCIPHGGGGPGMG 807 (1016)
Q Consensus 737 ~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~l-~~p-g~~Ga---Di~~~s~hK~~~~phg~GGPg~G 807 (1016)
++|+ .+|.+. .++++|+++|+++|+++++|.+... ...+. ..+ ..+.. -|++.|+.|.|++| |.++|
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG 250 (401)
T TIGR01264 175 NNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVP----GWRLG 250 (401)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCc----cceEE
Confidence 9995 688875 2589999999999999999987531 11110 011 11111 25677999998655 57799
Q ss_pred EEEEcc
Q 001769 808 PIGVKK 813 (1016)
Q Consensus 808 ~i~~~~ 813 (1016)
++++.+
T Consensus 251 ~iv~~~ 256 (401)
T TIGR01264 251 WIIIHD 256 (401)
T ss_pred EEEecC
Confidence 999864
No 460
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.23 E-value=6.4e-09 Score=125.95 Aligned_cols=394 Identities=14% Similarity=0.119 Sum_probs=217.9
Q ss_pred CCCCC---HHHHHHHHHHhCCCCHHHhhhccCCc--c-c---ccCCCCCCCCCCCC-CHHHHHHHHHHHhcCCC-cc--c
Q 001769 102 HNSAT---PEDQAKMSELVGLDNLDSLIDATVPK--S-I---RIDSMKFSKFDEGL-TESQMIEHMQKLASMNK-VY--K 168 (1016)
Q Consensus 102 ~i~~~---~~~~~~ml~~~g~~~~~~l~~~~iP~--~-~---~~~~~~lp~~~~~~-sE~e~~~~l~~la~~n~-~~--~ 168 (1016)
||||- .+.-++|++.+ ++.+-+-..+.-|. . + .++..++. ..+ +-.++++++.+...++. .+ .
T Consensus 8 flgpk~en~~~~~~~~~~~-~~~~~~~r~~~~p~d~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~l~~~sv~~~~P 83 (608)
T TIGR03811 8 FIGDKAENGQLYKDLLNKL-VDEHLGWRQNYMPQDKPVISPQERTSKSFT---KTVNNMKDVLDELSSRLRTESVPWHSA 83 (608)
T ss_pred eecCcccCHHHHHHHHHHH-HHHHHHHHHhcCCCCCCCCCHHHhcccccc---cCccCHHHHHHHHHHHHhcCCCCCCCc
Confidence 55653 34566666664 33333333333444 2 1 11123333 233 56778888887655543 22 2
Q ss_pred -cccCCCCCCCCChHHHHHHHH--hCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHcCCCCccEEEccchHHHHH-HH
Q 001769 169 -SFIGMGYYNTHVPPVILRNIM--ENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE-AM 244 (1016)
Q Consensus 169 -~~lG~g~y~~~~p~~i~~~i~--~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~G~~~anasl~~~~Taa~e-A~ 244 (1016)
.|.|-..-+..+|+.+.+.+. -|+. - ...|.|.++.+.-.+.-.++|+++|.+.+...+++|||.++- |+
T Consensus 84 ~ry~ghm~~~~~~paila~~~a~~~N~n----~--~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL 157 (608)
T TIGR03811 84 GRYWGHMNSETLMPAILAYNYAMLWNGN----N--VAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGL 157 (608)
T ss_pred cceEEECcCCCCHHHHHHHHHHHHhCCC----C--CccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHH
Confidence 577877777777877754332 2322 0 122356677777778889999999998877888999887654 44
Q ss_pred HHHhccc------cC-C----------------------------------------------C-CEEEEcCCCCHHHHH
Q 001769 245 AMCNNIQ------KG-K----------------------------------------------K-KTFIIASNCHPQTID 270 (1016)
Q Consensus 245 ~~a~~~~------~~-~----------------------------------------------g-d~Vlvs~~~Hps~~~ 270 (1016)
..|+... +. + + -+|++++..|.|+.+
T Consensus 158 ~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~K 237 (608)
T TIGR03811 158 WYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLK 237 (608)
T ss_pred HHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHH
Confidence 4454321 00 0 0 169999999999999
Q ss_pred HHHHhhcCCCe-EEEEeCc--------hhhhc-cC----C--CEeEEEEEcC-CCCeeeccHHHHHHHH---HhCCc--E
Q 001769 271 ICITRADGFDI-KVVVSDL--------KDIDY-KS----G--DVCGVLVQYP-GTEGEVLDYGDFIKNA---HANGV--K 328 (1016)
Q Consensus 271 ~l~~~a~~~gi-~v~~vd~--------~~L~~-l~----~--~t~~V~v~~p-n~~G~i~dl~eI~~la---h~~Ga--l 328 (1016)
.+.-+ +.|. .++.|+. ++|++ |. . .+.+|+.+.+ +.+|.|+||++|+++| +++|. +
T Consensus 238 Aa~il--GlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~ 315 (608)
T TIGR03811 238 AADII--GIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFY 315 (608)
T ss_pred HHHHc--CCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCcee
Confidence 87542 2231 3444443 34554 32 1 2556676776 5689999999999998 67887 5
Q ss_pred EEEEeccccc--cCCCC-----------------------------C-------CcccceEEEecC-ccccccCCCCCcc
Q 001769 329 VVMATDLLAL--TILKP-----------------------------P-------GELGADIVVGSA-QRFGVPMGYGGPH 369 (1016)
Q Consensus 329 viV~a~~~al--g~l~~-----------------------------p-------g~~GaDivvgs~-k~lg~P~g~GGP~ 369 (1016)
+||++-.-+. +++.+ + +=-+||-+..+. |++..|..
T Consensus 316 lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~----- 390 (608)
T TIGR03811 316 LHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYS----- 390 (608)
T ss_pred EeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCC-----
Confidence 8885422111 11111 0 112689999999 66666764
Q ss_pred eEEEEeehh-hhhcCC--CceEeeeecCCCCcceeeecccccccccccccCCccchh-hHHHHHHHHHH--HHHh--Ccc
Q 001769 370 AAFLATSQE-YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA-QALLANMAAMY--AVYH--GPE 441 (1016)
Q Consensus 370 ~Gfl~~~~~-l~~~lp--grivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~-~~l~a~~Aa~y--~~~~--g~~ 441 (1016)
+|.+.+|+. +.+.+. ...+-. .+ .+.+. .-+.+-+++. .+ +.++++| +..+ |.+
T Consensus 391 ~G~ll~Rd~~~~~~~~~~a~Yl~~-~~-~~~p~--------------~~g~~~legSR~g--a~AlklW~~lr~l~~G~~ 452 (608)
T TIGR03811 391 AGGIVIQDIRMRDVISYFATYVFE-KG-ADIPA--------------LLGAYILEGSKAG--ATAASVWAAHKVLPLNVT 452 (608)
T ss_pred eEEEEEeCHHHHHHHhcCcchhcc-cc-ccCcc--------------cccccceecCCcc--HHHHHHHHHHHHHhcCHH
Confidence 455666653 333221 000000 00 00000 0011111111 12 2223334 3445 999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcCC------CeEE--cCCCCccEEEEecC--C------HHHHHHHHHHcCcee-ecccC
Q 001769 442 GLKTIAQRVHGLAGTFALGLKKLG------TVEV--QGLPFFDTVKVKCA--D------AHAIASAAYKIEMNL-RVVDS 504 (1016)
Q Consensus 442 Gl~~ia~~~~~~a~~L~~~L~~~G------~~~l--~~~~~~~~v~i~~~--~------~~~v~~~L~~~GI~~-~~~~~ 504 (1016)
|+.++.+++.++++++.+.|++.+ .+++ +.+|.++.|.|+.. + ..++.+++.++-=+. ..+..
T Consensus 453 Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~ 532 (608)
T TIGR03811 453 GYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYN 532 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCC
Confidence 999999999999999999998842 2454 45667777776642 1 345555655542211 11223
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHhCC
Q 001769 505 NTVTASFDETTTL---EDVDKLFIVFAGG 530 (1016)
Q Consensus 505 ~~lris~te~~t~---edid~ll~aL~~~ 530 (1016)
.-+.+|-|.+..+ ....++++.++..
T Consensus 533 ~~~~~s~t~~~~~~yg~~~~~~~~~~~~~ 561 (608)
T TIGR03811 533 NEFITSHTDFAIPDYGDSPFAFVNSLGFS 561 (608)
T ss_pred cceEeeecccccchhhhhHHHHHHHcCCC
Confidence 4455555544322 2234466666543
No 461
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.23 E-value=7e-10 Score=131.46 Aligned_cols=263 Identities=14% Similarity=0.126 Sum_probs=165.3
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-ceeeecCChHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~-~~~l~~~sGa~ae~a~l~air~ 670 (1016)
..||++.+.+..+...+.......... .+.. +...++.+.|+++++-+ ...++.+||+++++++++.+|.
T Consensus 66 ~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~--------~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~ 136 (453)
T PRK06943 66 NLFGHANPRINAALKDQLDTLEHAMLA-GCTH--------EPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFH 136 (453)
T ss_pred hcCCCCCHHHHHHHHHHHHhcCCcccc-ccCC--------HHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 467888777766665554322111110 0111 12347888899988643 2357789999999999999988
Q ss_pred HHHhcCCCCCCEEEE-cCCCccccHHHHHhCCc------------EEEEEcCCCC-C-----------CCCHHHHHHHHH
Q 001769 671 YHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAK-G-----------NINIEELRKAAE 725 (1016)
Q Consensus 671 ~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G~------------~vv~v~~d~~-g-----------~iD~~~L~~~i~ 725 (1016)
|+..+|..+|.+||. ..+.||....+....|- .+..++.... + .-|++++++.++
T Consensus 137 ~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 216 (453)
T PRK06943 137 AWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFA 216 (453)
T ss_pred HHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 865555434555554 67889876443322211 2333443211 1 013578888887
Q ss_pred cCCCCEEEEEEEc-C-CCCccccc---cHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc--------CCcEEEeCcc
Q 001769 726 ANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLH 792 (1016)
Q Consensus 726 ~~~~~t~~v~i~~-P-n~~G~i~~---di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~--------GaDi~~~s~h 792 (1016)
.+.+++++|+++- . ...|++.+ =++++.++|+++|+++|+|-+++ |+.+.|.+ -+|++++ -
T Consensus 217 ~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T----G~GRtG~~fa~~~~gv~PDivt~--g 290 (453)
T PRK06943 217 ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV----GCGRTGTFFACEQAGVWPDFLCL--S 290 (453)
T ss_pred hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh----CCCCCcchhHHHhCCCCCCeEee--e
Confidence 6667899999986 2 45566542 47899999999999999997653 44455532 3799877 3
Q ss_pred ccccCCCCCC-CCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHH
Q 001769 793 KTFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1016)
Q Consensus 793 K~~~~phg~G-GPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~ 871 (1016)
|.++ +| -| +|.+++++++.+.+.... ........+++.|+++.++++.+.|..+-.+++
T Consensus 291 Kgl~----gG~~P-i~av~~~~ei~~~~~~~~------------~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l--- 350 (453)
T PRK06943 291 KGIS----GGYLP-LSLVLSRDAIFAAFYDDD------------VTRGFLHSHSYTGNPLACRAALATLDLFAEDDV--- 350 (453)
T ss_pred hhhc----cCccc-ceEEEEcHHHHHhhcccC------------ccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCH---
Confidence 7763 34 25 667777877665442100 000001223477888999999999999877664
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 001769 872 SKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 872 ~~~~~~nA~yla~~L~~~ 889 (1016)
.+++....++|.++|++.
T Consensus 351 ~~~~~~~G~~l~~~L~~l 368 (453)
T PRK06943 351 LARNARKSARLRAALAPL 368 (453)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456667788999888763
No 462
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.23 E-value=2.1e-09 Score=125.67 Aligned_cols=223 Identities=17% Similarity=0.241 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhc-CC-CCCCEEEEcC-CCccccHHHHHhC---------
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKAR-GD-HHRNVCIIPV-SAHGTNPATAAMC--------- 700 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~-g~-~~~~~Vlv~~-saHg~~~~~a~~~--------- 700 (1016)
...++++.|++++|.+. .++.+||++++++++.++|.|+..+ |. .+++.|+... +.||+......+.
T Consensus 80 ~~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~ 158 (401)
T TIGR01885 80 VFGEFAEYVTKLFGYDK-VLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNF 158 (401)
T ss_pred HHHHHHHHHHhhcCCCE-EEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccccc
Confidence 34578899999998764 4778999999999999988875322 21 1245566544 5577644333322
Q ss_pred C---cEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCccccc---cHHHHHHHHHHcCcEEEEEccccccc
Q 001769 701 G---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (1016)
Q Consensus 701 G---~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~---di~~I~~ia~~~g~lv~vDga~~~a~ 773 (1016)
| -.+..++. .|+++|+++++++.+++++|+++.+ +..|.+.+ .+++|.++|+++|+++++|.+++ ++
T Consensus 159 ~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~ 232 (401)
T TIGR01885 159 GPYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GL 232 (401)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 1 12344444 3899999999755567889998875 46688762 29999999999999999998863 33
Q ss_pred c--CcC---CCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccc
Q 001769 774 V--GLT---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1016)
Q Consensus 774 ~--~l~---~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G 848 (1016)
+ +-. .-..+..|+++++ |.++ +|+..+|+++.++++.+.+.... .+. ++.|
T Consensus 233 g~~G~~~~~~~~~~~~di~~~g--K~l~----~g~~~ig~v~~~~~i~~~~~~~~---------------~~~---t~~~ 288 (401)
T TIGR01885 233 GRTGKLLCVDHENVKPDIVLLG--KALS----GGVYPVSAVLADDDVMLTIKPGE---------------HGS---TYGG 288 (401)
T ss_pred CccchhhHHhhcCCCCCEEEee--cccc----CCCCCcEEEEEcHHHHhhccCCC---------------CCC---CCCC
Confidence 2 100 0112457888764 8874 34445788888877665542100 010 1223
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
++..+..+.+.|..+-.+++. ++...+++++.+.|++.
T Consensus 289 ~p~~~~aa~a~L~~i~~~~l~---~~~~~~~~~~~~~L~~l 326 (401)
T TIGR01885 289 NPLACAVAVAALEVLEEEKLA---ENAEKLGEIFRDQLKKL 326 (401)
T ss_pred CHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhc
Confidence 445566667777777655554 46667789999999873
No 463
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.22 E-value=4e-10 Score=130.22 Aligned_cols=202 Identities=13% Similarity=0.207 Sum_probs=130.9
Q ss_pred cccccccccCCCChhhhhccc---ccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHH
Q 001769 590 SMIPLGSCTMKLNATTEMMPV---TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLM 666 (1016)
Q Consensus 590 ~~i~LGs~t~~~~~~~~~~~~---~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~ 666 (1016)
.+|.|+.+.+++++....... .... .+++| ..|. .++++.+++.+|.+...+..++|++. +..+
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~-~~~Yp------~~g~----~~Lr~aia~~~~~~~~~I~vt~Gs~e--~i~~ 96 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLD-HALYP------DGGA----TTLRQTIANKLHVKMEQVLCGSGLDE--VIQI 96 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHh-cCcCC------CCCH----HHHHHHHHHHhCCCcceEEECCCHHH--HHHH
Confidence 467788888777655333221 1111 12323 1343 35777788888988767777777541 3344
Q ss_pred HHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccc
Q 001769 667 VIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVY 745 (1016)
Q Consensus 667 air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i 745 (1016)
+++.+. .++++|+++++.+..+...+...|.+++.++.+ ++.+|+++|+++++ +++++|++++|| .+|.+
T Consensus 97 ~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~---~~~~~v~i~~P~NPTG~~ 167 (366)
T PRK01533 97 ISRAVL-----KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD---NDTKIVWICNPNNPTGTY 167 (366)
T ss_pred HHHHhc-----CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC---cCCcEEEEeCCCCCCCCC
Confidence 444431 357899999887777777788999999999986 45699999999997 688999999995 68998
Q ss_pred cccHHHHHHH---HHHcCcEEEEEccccc-ccc-CcCC--C--CccCCcEEEeCccccccCCCCCCCCeEEEEEEccccc
Q 001769 746 EEGIDEICKI---IHDNGGQVYMDGANMN-AQV-GLTS--P--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (1016)
Q Consensus 746 ~~di~~I~~i---a~~~g~lv~vDga~~~-a~~-~l~~--p--g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~ 816 (1016)
. +.+++.++ |++++ ++++|-+... ... .... + ...+--|++.|+.|+|++| |..+|++++.+++.
T Consensus 168 ~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~i~~~~~~ 241 (366)
T PRK01533 168 V-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLA----SFRVGYAVGHEELI 241 (366)
T ss_pred c-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcCh----HHHHhHHhCCHHHH
Confidence 7 55555554 44544 6778976421 000 0000 0 1112237778999999655 56789998877665
Q ss_pred ccC
Q 001769 817 PFL 819 (1016)
Q Consensus 817 ~~l 819 (1016)
+.+
T Consensus 242 ~~l 244 (366)
T PRK01533 242 EKL 244 (366)
T ss_pred HHH
Confidence 543
No 464
>PRK12403 putative aminotransferase; Provisional
Probab=99.22 E-value=1e-09 Score=130.39 Aligned_cols=261 Identities=16% Similarity=0.168 Sum_probs=157.6
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-ceeeecCChHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~-~~~l~~~sGa~ae~a~l~air~ 670 (1016)
..||++.+++..+...+....+....+.. +..+...++.+.|+++++.+ ...++.+||++++++++.++|.
T Consensus 66 ~~lGh~hp~v~~A~~~q~~~~~~~~~~~~--------~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~ 137 (460)
T PRK12403 66 TNLGYGRKDLAAAAARQMEQLPYYNMFFH--------TTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRR 137 (460)
T ss_pred hcCCCCCHHHHHHHHHHHHhCCCeecccc--------cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 35788877666665555433221111100 11223457889999998733 3357789999999999999999
Q ss_pred HHHhcCCCCCCEEEE-cCCCccccHHHHHhCCcE-----------EEEEcCCCCC----C--------CCHHHHHHHHH-
Q 001769 671 YHKARGDHHRNVCII-PVSAHGTNPATAAMCGMK-----------IVSVGTDAKG----N--------INIEELRKAAE- 725 (1016)
Q Consensus 671 ~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G~~-----------vv~v~~d~~g----~--------iD~~~L~~~i~- 725 (1016)
|....|..++.+|+. ..+.||..-....+.|.+ +..+|...-. . .+++++++.+.
T Consensus 138 ~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~ 217 (460)
T PRK12403 138 YWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILE 217 (460)
T ss_pred HHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHH
Confidence 865444323344443 456798754443332221 3344321100 0 12356766663
Q ss_pred cCCCCEEEEEEEcC-CCCcccccc---HHHHHHHHHHcCcEEEEEccccccccCcCCCCcc--------CCcEEEeCccc
Q 001769 726 ANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHK 793 (1016)
Q Consensus 726 ~~~~~t~~v~i~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~--------GaDi~~~s~hK 793 (1016)
.+++++++|+++.- +..|++.++ +++|.++|+++|+++|+|-++ .++.+.|.+ -+|++++ -|
T Consensus 218 ~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~----tGfGRtG~~~a~e~~gv~PDiv~~--gK 291 (460)
T PRK12403 218 LGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI----GGFGRTGEWFAHEHFGFEPDTLSI--AK 291 (460)
T ss_pred hCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcCchhhhhhhcCCCCCeEEE--cc
Confidence 23367889998863 456777622 999999999999999999776 344444433 2688875 47
Q ss_pred cccCCCCCC-CCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHH
Q 001769 794 TFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 872 (1016)
Q Consensus 794 ~~~~phg~G-GPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~ 872 (1016)
.++ +| .|- |.+++++++.+.+... + .. ....+++.|+++.++++.+.|..+-.+++ .
T Consensus 292 ~lg----gG~~Pi-ga~v~~~~i~~~~~~~--~-----------~~-~~~~~T~~gnPl~~Aaala~L~~i~~~~l---~ 349 (460)
T PRK12403 292 GLT----SGYVPM-GGLVLSKRIAEALVEQ--G-----------GV-FAHGLTYSGHPVAAAVAIANLKALRDEGV---V 349 (460)
T ss_pred ccc----ccccce-EEEEECHHHHHHHhcC--C-----------Cc-cccCCCCCCCHHHHHHHHHHHHHHHhccH---H
Confidence 774 34 264 4455777665543110 0 00 00123466788889999999999877665 3
Q ss_pred HHHH-HHHHHHHHHHhc
Q 001769 873 KIAI-LNANYMAKRLEK 888 (1016)
Q Consensus 873 ~~~~-~nA~yla~~L~~ 888 (1016)
++.. .+.+++.++|++
T Consensus 350 ~~~~~~~g~~l~~~L~~ 366 (460)
T PRK12403 350 TRVKDDTGPYLQRCLRE 366 (460)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 4553 678888888864
No 465
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.22 E-value=7.1e-11 Score=135.83 Aligned_cols=228 Identities=11% Similarity=0.064 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCc---eeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEE
Q 001769 629 GYQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 629 G~~e~~~el~~~laeL~G~~~---~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv 705 (1016)
-..++++++++.+++++|.+. +.+..+||+.+.+ +++..+.. ++ +++++|++....|.. ...++..|++++
T Consensus 41 ~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~---~~~~~l~~-~~-~~~~~i~~g~~~~~~-~~~a~~~g~~~~ 114 (355)
T cd00611 41 DFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFA---AVPLNLLG-DK-GTADYVVTGAWSAKA-AKEAKRYGGVVV 114 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHH---HHHHhcCC-CC-CeEEEEECCHHHHHH-HHHHHhcCCCcE
Confidence 345778899999999999842 2344455665554 44444321 22 244555542221111 124677899999
Q ss_pred EEcCCCCCCC-C-HHHHHHHHHcCCCCEEEEEEEcC-CCCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc
Q 001769 706 SVGTDAKGNI-N-IEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1016)
Q Consensus 706 ~v~~d~~g~i-D-~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~ 782 (1016)
.++++++|.. | ++..+..++ ++|++|.+++- |.+|+.. . ++++.+|++++||+++.++...+ ...++
T Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~---~---~i~~~~g~~~~VDa~qs~g~~~i-dv~~~ 184 (355)
T cd00611 115 IVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEF---D---EVPDTGGVPLVADMSSNILSRPI-DVSKF 184 (355)
T ss_pred EEecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEc---c---eecccCCCeEEEEccccccCCCC-CHHHh
Confidence 9998765533 5 333334454 78898888874 6788863 2 34455999999999997655432 33344
Q ss_pred CCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCC--CCcC-CCCCCccCCccchhhHHHHHHHH
Q 001769 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA--PEKS-QPLGTIAAAPWGSALILPISYTY 859 (1016)
Q Consensus 783 GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~--re~~-~~~g~i~s~~~G~a~~~~~a~a~ 859 (1016)
|+++.+.||+| |.||+|++++++++.+.++....... .+.. .... ..|.++.. ...+ .+.
T Consensus 185 --~~~~ss~~K~l------GP~G~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Tpn~~~-----i~~L---~aa 247 (355)
T cd00611 185 --GVIYAGAQKNL------GPAGVTVVIVRKDLLGKARKITPSML-NYKTHADNNSLYNTPPTFA-----IYMM---GLV 247 (355)
T ss_pred --CEEEeeccccc------CCCceEEEEECHHHHhhcccCCCCcc-cHHHHHhcCCCCCCChHHH-----HHHH---HHH
Confidence 45666789987 34689999999877655543211100 0000 0001 12222211 1223 344
Q ss_pred HHHhChh-hHHHHHHHHHHHHHHHHHHHhcc
Q 001769 860 IAMMGSK-GLTEASKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 860 l~~lG~e-Gl~~~~~~~~~nA~yla~~L~~~ 889 (1016)
|.++-.+ |+..+.+++..+++++.++|++.
T Consensus 248 l~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~ 278 (355)
T cd00611 248 LKWLKEQGGVEAMEKRNRQKAQLLYDTIDNS 278 (355)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 5555455 68899999999999999999974
No 466
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.22 E-value=4.2e-10 Score=133.41 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=160.3
Q ss_pred ccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCC-ceeeecCChHHHHHHHHHHHH
Q 001769 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1016)
Q Consensus 591 ~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~-~~~l~~~sGa~ae~a~l~air 669 (1016)
...+|+|.+.+..+...+....+.+..+.+ . +...++.+.|++++.-+ ...++.+||++++++++..+|
T Consensus 93 ~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~-~---------~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr 162 (459)
T PRK11522 93 IFNVGHRNPVVVSAVQNQLAKQPLHSQELL-D---------PLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK 162 (459)
T ss_pred hhhcCCCCHHHHHHHHHHHhhCcccccccC-C---------HHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHH
Confidence 456788877776666665433322222111 1 23446778888887532 235778999999999999999
Q ss_pred HHHHhcCCCCCCEEEE-cCCCccccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHc---CCCCEEE
Q 001769 670 AYHKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEA---NRDNLST 733 (1016)
Q Consensus 670 ~~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G~------------~vv~v~~d~~g~iD~~~L~~~i~~---~~~~t~~ 733 (1016)
.|...+| |.+||. ..+.||....+....|- .+..+|. .|.+++++.+++ +++++++
T Consensus 163 ~~t~~~g---r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAa 234 (459)
T PRK11522 163 AYQSPRG---KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-----GNIEAMRTALSECKKTGDDVAA 234 (459)
T ss_pred HHhccCC---CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-----CCHHHHHHHHHHhhccCCcEEE
Confidence 8743222 344544 56889976655433221 1223333 378899988863 2357889
Q ss_pred EEEEcC-CCCcccccc----HHHHHHHHHHcCcEEEEEccccccccCcCCCCcc--------CCcEEEeCccccccCCCC
Q 001769 734 LMVTYP-STHGVYEEG----IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHG 800 (1016)
Q Consensus 734 v~i~~P-n~~G~i~~d----i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~--------GaDi~~~s~hK~~~~phg 800 (1016)
|+++.. +..|++. + ++++.++|+++|+++|+|-+++ |+.+.|.+ -+|++++ .|.++
T Consensus 235 vIvEpv~g~~G~~~-pp~~yl~~lr~lc~~~g~llI~DEV~t----G~GRtG~~~a~e~~gv~PDivt~--gK~lg---- 303 (459)
T PRK11522 235 VILEPIQGEGGVIL-PPEGYLTAVRKLCDEFGALLILDEVQT----GMGRTGKMFACEHENVQPDILCL--AKALG---- 303 (459)
T ss_pred EEEecccCCCCCcc-CCHHHHHHHHHHHHHcCCEEEecccee----cCCccchhhhhhccCCCCCEEEe--chhhh----
Confidence 999864 5667776 4 8999999999999999998764 33344432 2688755 47663
Q ss_pred CC-CCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHH
Q 001769 801 GG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (1016)
Q Consensus 801 ~G-GPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA 879 (1016)
+| -| +|.+++++++...+.... ....+++.|++..++++.+.|..+-.+++ .++...+.
T Consensus 304 gG~~P-igav~~~~~i~~~~~~~~----------------~~~~~T~~gnp~~~Aaala~L~~i~~~~l---~~~~~~~g 363 (459)
T PRK11522 304 GGVMP-IGATIATEEVFSVLFDNP----------------FLHTTTFGGNPLACAAALATINVLLEQNL---PAQAEQKG 363 (459)
T ss_pred CCCcc-ceeEEEcHHHHHHhccCC----------------cccCCCCCCCHHHHHHHHHHHHHHhcchH---HHHHHHHH
Confidence 33 25 455666665544321000 01123477788889999999999877654 56788889
Q ss_pred HHHHHHHhc
Q 001769 880 NYMAKRLEK 888 (1016)
Q Consensus 880 ~yla~~L~~ 888 (1016)
+||.++|++
T Consensus 364 ~~l~~~L~~ 372 (459)
T PRK11522 364 DYLLDGFRQ 372 (459)
T ss_pred HHHHHHHHH
Confidence 999999976
No 467
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.22 E-value=7.3e-10 Score=129.55 Aligned_cols=223 Identities=19% Similarity=0.191 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHhCCC-ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCccccHHHHHhC---------
Q 001769 632 EMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMC--------- 700 (1016)
Q Consensus 632 e~~~el~~~laeL~G~~-~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~-~saHg~~~~~a~~~--------- 700 (1016)
+...++++.+++++|.+ ...++.+||++++++++.+++.+ .++++|++. ...||.........
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 152 (413)
T cd00610 79 EPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGF 152 (413)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccccC
Confidence 45678999999999843 23466789998888777777654 235666664 46788765554332
Q ss_pred ---CcEEEEEcCCCC------CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccccc----HHHHHHHHHHcCcEEEEE
Q 001769 701 ---GMKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYMD 766 (1016)
Q Consensus 701 ---G~~vv~v~~d~~------g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~d----i~~I~~ia~~~g~lv~vD 766 (1016)
+.+++.+|.+.. ...|+++|+++++++++++++|+++..+ ..|.+. + +++|.++|+++|+++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~-~~~~~l~~l~~l~~~~~~~li~D 231 (413)
T cd00610 153 GPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIV-PPPGYLKALRELCRKHGILLIAD 231 (413)
T ss_pred CCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEe
Confidence 224667776522 2338999999998544477777776544 458765 4 999999999999999999
Q ss_pred ccccccccCcCC-----CCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCC
Q 001769 767 GANMNAQVGLTS-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1016)
Q Consensus 767 ga~~~a~~~l~~-----pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~ 841 (1016)
.++. +++.... .....+|++++ .|+|+ + |..+|++++++++.+.++.... ...+.
T Consensus 232 ev~~-g~g~~g~~~~~~~~~~~~d~~t~--sK~l~----~-g~~~g~~~~~~~~~~~~~~~~~------------~~~~t 291 (413)
T cd00610 232 EVQT-GFGRTGKMFAFEHFGVEPDIVTL--GKGLG----G-GLPLGAVLGREEIMDAFPAGPG------------LHGGT 291 (413)
T ss_pred cccc-CCCcCcchhhHhhcCCCCCeEEE--ccccc----C-ccccEEEEEcHHHHHhhccCCC------------CCCCC
Confidence 8764 1210000 01123577655 49885 2 3457888888877665411000 00011
Q ss_pred ccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 842 i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+.++...++++.+.|..+..+ ++.++...+.+++.++|++
T Consensus 292 ----~~~~~~~~~a~~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~ 331 (413)
T cd00610 292 ----FGGNPLACAAALAVLEVLEEE---GLLENAAELGEYLRERLRE 331 (413)
T ss_pred ----CCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHH
Confidence 223445556667777776543 3456777888899998876
No 468
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.22 E-value=1e-08 Score=119.18 Aligned_cols=267 Identities=9% Similarity=0.059 Sum_probs=165.4
Q ss_pred HHHHHHHHc------CCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-
Q 001769 216 FQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL- 288 (1016)
Q Consensus 216 ~q~~iA~L~------G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~- 288 (1016)
+++.+|+.+ +.++.++.+++|++.++..++.++. ++||+|+++.-.|+.+...++. .|.+++.++.
T Consensus 71 lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~---~~gd~vlv~~p~y~~~~~~~~~----~g~~~~~~~~~ 143 (384)
T PRK06348 71 LIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSIL---DPGDEVIIHEPYFTPYKDQIEM----VGGKPIILETY 143 (384)
T ss_pred HHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhc---CCCCEEEEeCCCCcchHHHHHH----cCCEEEEecCC
Confidence 445666655 3567789999999988777666652 3789999999999888877654 3656555442
Q ss_pred ---------hhhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c--cC-CCC----CCc
Q 001769 289 ---------KDIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L--TI-LKP----PGE 346 (1016)
Q Consensus 289 ---------~~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-l--g~-l~~----pg~ 346 (1016)
++|++ +.+++++|++.+| |.+|.+.+ +++|.++|+++|+++++| +... + .- ..+ ++.
T Consensus 144 ~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~ 222 (384)
T PRK06348 144 EEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISD-EVYDGFSFYEDFVPMATLAGM 222 (384)
T ss_pred cCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEe-cccccceeCCCccchhhcCCC
Confidence 34555 5678889998888 68998864 788999999999999984 2221 1 10 001 111
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhH
Q 001769 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1016)
Q Consensus 347 ~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~ 425 (1016)
.+-.|+++|. |.|+.| |=-.||+.+.+++++.+- +.+.+...|.+..
T Consensus 223 ~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~~~~~~~~~ 270 (384)
T PRK06348 223 PERTITFGSFSKDFAMT----GWRIGYVIAPDYIIETAK----------------------------IINEGICFSAPTI 270 (384)
T ss_pred cCcEEEEecchhccCCc----cccceeeecCHHHHHHHH----------------------------HHHHhccCCCCHH
Confidence 1234777786 877543 113588888776655441 1111112222221
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC--C--HHHHHHHHH-HcCce
Q 001769 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA--D--AHAIASAAY-KIEMN 498 (1016)
Q Consensus 426 l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~--~--~~~v~~~L~-~~GI~ 498 (1016)
. ..+++.++. ...+-++++.+...++.+++.+.|++++++++..+ .++ +.++++ + ..++.+.|. ++||.
T Consensus 271 ~-q~~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~~~~~~~~~~~~~~l~~~l~~~~gv~ 346 (384)
T PRK06348 271 S-QRAAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIY--AFINIKKTGLSSVEFCEKLLKEAHVL 346 (384)
T ss_pred H-HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEecccCCCCHHHHHHHHHHhCCEE
Confidence 1 111111122 22223556677777888889999988743655432 222 223332 2 678888876 56998
Q ss_pred eecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 499 LRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 499 ~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+.+- ..+.+|+|+. .+.+++++.++.|.
T Consensus 347 v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~ 380 (384)
T PRK06348 347 VIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIE 380 (384)
T ss_pred EcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 7531 2478999996 47888888887775
No 469
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.22 E-value=4e-10 Score=130.88 Aligned_cols=169 Identities=18% Similarity=0.167 Sum_probs=123.9
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++.+++.+|++..++..++|++. +..++++.+. .++++|+++++.++.+...++..|++++.++.++++.
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~--~i~~~~~~~~-----~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 161 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADE--LIDLLMRCVL-----DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS 161 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence 36888899999988666667777542 3334444331 3568999999877767677888999999999987788
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC----CccCCcEEEe
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCHL 789 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p----g~~GaDi~~~ 789 (1016)
+|+++|++++. .+++++|++++|| .+|.+. +.+++.++++.. +++++|.+... +.....+ ....-.+++.
T Consensus 162 ~d~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~-~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~ 236 (380)
T PLN03026 162 LDVPRIVEAVE--THKPKLLFLTSPNNPDGSII-SDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLR 236 (380)
T ss_pred cCHHHHHHHHh--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEe
Confidence 99999999993 1689999999995 689997 899999999865 89999987531 1100011 1122347788
Q ss_pred CccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
|++|.|++| |.++|+++.++++...+
T Consensus 237 SfSK~~gla----GlRiGy~~~~~~~i~~l 262 (380)
T PLN03026 237 TFSKRAGLA----GLRVGYGAFPLSIIEYL 262 (380)
T ss_pred cchHhhcCc----cccceeeecCHHHHHHH
Confidence 999999655 67899999887665543
No 470
>PRK07678 aminotransferase; Validated
Probab=99.22 E-value=8.1e-10 Score=130.96 Aligned_cols=261 Identities=16% Similarity=0.195 Sum_probs=162.5
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..||+|.+.+..+...+......+....+ . +...++.+.|+++++.....++.+||+++++++++.+|.|
T Consensus 59 ~~lGh~~p~v~~ai~~q~~~~~~~~~~~~-~---------~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 128 (451)
T PRK07678 59 VNVGYGRKELAEAAYEQLKTLSYFPLTQS-H---------EPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQY 128 (451)
T ss_pred hcCCCCCHHHHHHHHHHHHhcCccccccC-C---------HHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 45788877766655555332221111111 1 1234788889999876545577899999999999999998
Q ss_pred HHhcCCCCCCEEEE-cCCCccccHHHHHhCCc------------EEEEEcCCCCCC---------CC---HHHHHHHHH-
Q 001769 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKGN---------IN---IEELRKAAE- 725 (1016)
Q Consensus 672 ~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G~------------~vv~v~~d~~g~---------iD---~~~L~~~i~- 725 (1016)
...+|...|.+||. ..+.||....+....|. .+..++...... .| ++.+++.++
T Consensus 129 t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (451)
T PRK07678 129 HAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW 208 (451)
T ss_pred HHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh
Confidence 75555334555554 66889976544332111 233343321111 11 234666775
Q ss_pred cCCCCEEEEEEEcC-CCCcccccc---HHHHHHHHHHcCcEEEEEccccccccCcCCCCc------c--CCcEEEeCccc
Q 001769 726 ANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHK 793 (1016)
Q Consensus 726 ~~~~~t~~v~i~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~------~--GaDi~~~s~hK 793 (1016)
.+.+++++|+++-. ...|++.++ ++++.++|+++|+++|+|-+++ |+.+.|. + -+|++++ -|
T Consensus 209 ~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t----GfGRtG~~~~~~~~gv~PDivt~--gK 282 (451)
T PRK07678 209 ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVIC----GFGRTGKAFGFMNYGVKPDIITM--AK 282 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh----cCCcCchhHHHHhcCCCCCEEEe--ec
Confidence 33478999999863 355666522 8999999999999999997653 3333332 2 3798877 37
Q ss_pred cccCCCCCCC-CeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHH
Q 001769 794 TFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 872 (1016)
Q Consensus 794 ~~~~phg~GG-Pg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~ 872 (1016)
.++ +|. | +|.+++++++.+.+..... ...-...+++.|++..++++.+.|..+-.+++ .
T Consensus 283 ~lg----gG~~P-i~av~~~~~i~~~~~~~~~------------~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~---~ 342 (451)
T PRK07678 283 GIT----SAYLP-LSATAVKKEIYEAFKGKGE------------YEHFRHVNTFGGNPAACALALKNLEIMENENL---I 342 (451)
T ss_pred ccc----cCCcc-eeEEEEcHHHHHHHhccCc------------ccccccCCCCCcCHHHHHHHHHHHHHHHhCCH---H
Confidence 774 442 5 6778888777654421100 00001123477888999999999999877654 4
Q ss_pred HHHHHHHHHHHHHHhc
Q 001769 873 KIAILNANYMAKRLEK 888 (1016)
Q Consensus 873 ~~~~~nA~yla~~L~~ 888 (1016)
++..++..+|.++|++
T Consensus 343 ~~~~~~g~~l~~~l~~ 358 (451)
T PRK07678 343 ERSAQLGELLLEQLKE 358 (451)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677788888888864
No 471
>PRK07683 aminotransferase A; Validated
Probab=99.22 E-value=9e-09 Score=119.80 Aligned_cols=267 Identities=13% Similarity=0.153 Sum_probs=165.9
Q ss_pred HHHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001769 215 NFQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1016)
Q Consensus 215 e~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd 287 (1016)
++++.+|+++ |. ++. ++.+++|++.++..++.++ . ++||+|+++...++.+...++ ..|++++.++
T Consensus 69 ~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l-~--~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~ 141 (387)
T PRK07683 69 ELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTI-L--EPGTEVILPAPIYPGYEPIIR----LCGAKPVFID 141 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-C--CCCCEEEEcCCCccchHHHHH----HcCCEEEEee
Confidence 3556666665 44 455 7888999998877666554 2 378999999998888776654 3588888776
Q ss_pred ch---------hhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC----CCCc---
Q 001769 288 LK---------DIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PPGE--- 346 (1016)
Q Consensus 288 ~~---------~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l~----~pg~--- 346 (1016)
.+ ++++ +.++++++++.+| |.+|.+. ++++|+++|+++|+++++|. ..+..... +...
T Consensus 142 ~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~ 220 (387)
T PRK07683 142 TRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDE-IYSELVYEQPHTSIAHFPE 220 (387)
T ss_pred cCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEec-ccccceeCCCcCChhhccC
Confidence 42 3444 5677899988888 6899875 48999999999999999842 22211111 1111
Q ss_pred -ccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhh
Q 001769 347 -LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1016)
Q Consensus 347 -~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~ 424 (1016)
.+=.|+++|. |.||.| |=-.||+.+.+++++.+-. .+..+..|+++
T Consensus 221 ~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~l~~~~~~----------------------------~~~~~~~~~~~ 268 (387)
T PRK07683 221 MREKTIVINGLSKSHSMT----GWRIGFLFAPSYLAKHILK----------------------------VHQYNVTCASS 268 (387)
T ss_pred CcCCeEEEeeccccccCc----cceeEEEEcCHHHHHHHHH----------------------------HHHhccCCCCh
Confidence 1235677776 888654 2236898888776655410 00111223323
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC--C--HHHHHHH-HHHcCc
Q 001769 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA--D--AHAIASA-AYKIEM 497 (1016)
Q Consensus 425 ~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~--~--~~~v~~~-L~~~GI 497 (1016)
. +..++..+.-.+..-++++.++..++.+++.+.|++.| +.+..+ .+| +.+.++ . ..++.+. |.++||
T Consensus 269 ~--~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~gI 343 (387)
T PRK07683 269 I--SQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGAFY--LFPSIGHFTMSSFDFALDLVEEAGL 343 (387)
T ss_pred H--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCeeEE--EEEecccCCCCHHHHHHHHHHhCCE
Confidence 2 12222211122333356677777888889999998876 665432 222 222222 1 4567655 567899
Q ss_pred eeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 498 NLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 498 ~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.+... .++.+||++.. +++++.+.++.|.
T Consensus 344 ~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~ 378 (387)
T PRK07683 344 AVVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLE 378 (387)
T ss_pred EEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 87542 25789999985 5777777776664
No 472
>PRK07482 hypothetical protein; Provisional
Probab=99.22 E-value=8.2e-10 Score=131.26 Aligned_cols=263 Identities=13% Similarity=0.148 Sum_probs=162.5
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC--CCceeeecCChHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G--~~~~~l~~~sGa~ae~a~l~air 669 (1016)
..||+|.+.+..+...+......+..+.-+. .+...++.+.|++++. ++. .++.+||+++++++++.+|
T Consensus 62 ~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~--------~~~~~~lAe~L~~~~p~~~~~-v~f~~sGSEAve~AlKlAr 132 (461)
T PRK07482 62 VNVGYGRTEVAEAIAEQAKELAYYHTYVGHG--------TEASITLSKRIIDRAPAGMSK-VYYGLSGSDANETQIKLVW 132 (461)
T ss_pred hcCCCCCHHHHHHHHHHHHhcCccccccccC--------CHHHHHHHHHHHHhCCCCcCE-EEEeCchHHHHHHHHHHHH
Confidence 4678887777666666543322121110011 1234578888988884 333 4678999999999999999
Q ss_pred HHHHhcCCCCCCEEEE-cCCCccccHHHHHhCC------------cEEEEEcCCC--C----C-------CCCHHHHHHH
Q 001769 670 AYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------------MKIVSVGTDA--K----G-------NINIEELRKA 723 (1016)
Q Consensus 670 ~~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G------------~~vv~v~~d~--~----g-------~iD~~~L~~~ 723 (1016)
.|...+|...|.+||. ..+.||....+..+.| -.+..++... . + .-|++++++.
T Consensus 133 ~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (461)
T PRK07482 133 YYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEEL 212 (461)
T ss_pred HHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHH
Confidence 8865555434566665 6788996543222111 1123333221 1 1 0146788888
Q ss_pred HHc-CCCCEEEEEEEcC-CCCcccc---ccHHHHHHHHHHcCcEEEEEccccccccCcCCCCcc--------CCcEEEeC
Q 001769 724 AEA-NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1016)
Q Consensus 724 i~~-~~~~t~~v~i~~P-n~~G~i~---~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg~~--------GaDi~~~s 790 (1016)
+.. ..+++++|+++-. ...|++. .=+++|.++|+++|+++|+|-++ .|+.+.|.+ -+|++++
T Consensus 213 ~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~----tGfGRtG~~~a~~~~gv~PDiv~~- 287 (461)
T PRK07482 213 ILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVV----TGFGRLGSMFGSDHYGIEPDLITV- 287 (461)
T ss_pred HHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccc----cCCCcCcchhhHHhcCCCCCEEEE-
Confidence 853 2367999999853 3456664 24789999999999999999765 344455433 3799876
Q ss_pred ccccccCCCCCCC-CeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHH
Q 001769 791 LHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1016)
Q Consensus 791 ~hK~~~~phg~GG-Pg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~ 869 (1016)
-|.++ +|- | +|.+++++++.+.+..... .. ... ...+++.|+++.++++.+.|..+-.+++
T Consensus 288 -gKgl~----gG~~P-i~av~~~~~i~~~~~~~~~-~~---------~~~-~h~~T~~gnpl~~Aaa~a~L~~~~~~~l- 349 (461)
T PRK07482 288 -AKGLT----SAYAP-LSGSIVGEKVWDVLEQGSD-EH---------GAI-GHGWTYSGHPICAAAALANLDILERENL- 349 (461)
T ss_pred -ccccc----cCccc-cceeeecHHHHHHHhcccc-cC---------Ccc-ccCCCCCcCHHHHHHHHHHHHHHHhCCH-
Confidence 37773 342 4 5667777766543321000 00 000 1223477899999999999999977765
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 001769 870 EASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 870 ~~~~~~~~nA~yla~~L~~ 888 (1016)
.+++....++|.++|++
T Consensus 350 --~~~~~~~g~~l~~~L~~ 366 (461)
T PRK07482 350 --VGNAAEVGAYFRARLRA 366 (461)
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 44567788899988875
No 473
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.21 E-value=2.9e-10 Score=137.29 Aligned_cols=216 Identities=13% Similarity=0.172 Sum_probs=138.7
Q ss_pred HHHHHHHHhccccCCCccccccccccC---CCChhhhhcc--c-ccccccccCCCCCchhhhhHHHHHHHHHHHHHHHh-
Q 001769 573 LLRYIHLLQSKELSLCHSMIPLGSCTM---KLNATTEMMP--V-TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT- 645 (1016)
Q Consensus 573 ~~r~l~~l~~~n~~~~~~~i~LGs~t~---~~~~~~~~~~--~-~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~- 645 (1016)
+....+++...+ ..+|.|+.|.+ .+++..+... . ..... +-|.+ .+|..++.+.+.+++.+-.
T Consensus 134 ~~~~~~~~~~~g----~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~---~~Y~~---~~G~~~lReaia~~~~~~~~ 203 (517)
T PRK13355 134 VVDEANRMEAAG----THILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT---EGYSD---SKGLFSARKAIMQYAQLKGL 203 (517)
T ss_pred HHHHHHHHHHcC----CCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC---CCCCC---CcChHHHHHHHHHHHHhcCC
Confidence 445555554433 34677887766 3422221111 1 11122 23444 5787766666666654433
Q ss_pred -CCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC--CCCCHHHHHH
Q 001769 646 -GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK--GNINIEELRK 722 (1016)
Q Consensus 646 -G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~--g~iD~~~L~~ 722 (1016)
+.+...+..++|++. +..++++.+. +++|+|+++.+.+..+...+.+.|.+++.++++++ +.+|+++|++
T Consensus 204 ~~~~~~~I~it~G~~e--al~~~~~~l~-----~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~ 276 (517)
T PRK13355 204 PNVDVDDIYTGNGVSE--LINLSMSALL-----DDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRS 276 (517)
T ss_pred CCCChhHEEEeCcHHH--HHHHHHHHhC-----CCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHH
Confidence 234445666666541 3334444331 36789999999888888888999999999998754 5799999999
Q ss_pred HHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccC--cCCCCccCCcE--E-EeCccc
Q 001769 723 AAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--LTSPGYIGADV--C-HLNLHK 793 (1016)
Q Consensus 723 ~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~--l~~pg~~GaDi--~-~~s~hK 793 (1016)
+++ ++|++|++.+|| .+|.+. +++++|+++|+++|+++++|.+... ...+ ......+..|+ + +.|+.|
T Consensus 277 ~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK 353 (517)
T PRK13355 277 KIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSK 353 (517)
T ss_pred hcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchh
Confidence 997 789999999995 688876 2489999999999999999976421 1011 11112222342 2 368899
Q ss_pred cccCCCCCCCCeEEEEEEc
Q 001769 794 TFCIPHGGGGPGMGPIGVK 812 (1016)
Q Consensus 794 ~~~~phg~GGPg~G~i~~~ 812 (1016)
+|++| |..+|++++.
T Consensus 354 ~~~~~----G~RiG~~i~~ 368 (517)
T PRK13355 354 SHMIA----GYRIGWMILS 368 (517)
T ss_pred hccCc----ccceEEEEee
Confidence 98655 6889999864
No 474
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.21 E-value=2e-09 Score=125.90 Aligned_cols=181 Identities=14% Similarity=0.186 Sum_probs=125.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC--ce-eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~--~~-~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~ 703 (1016)
.+|..++...+.+++.+.+|.+ .. .+..++|++. +..++++.+. .+++.|+++++.+..+...+.+.|.+
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 142 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE--GYVHLVQAIT-----NPGDVAIVPDPAYPIHSQAFILAGGN 142 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 5788888888888888887865 33 4666666542 2333444331 36789999999888887888899999
Q ss_pred EEEEcCC--CCCCCCHHH----HHHHHHcCCCCEEEEEEEcC-CCCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cc
Q 001769 704 IVSVGTD--AKGNINIEE----LRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ 773 (1016)
Q Consensus 704 vv~v~~d--~~g~iD~~~----L~~~i~~~~~~t~~v~i~~P-n~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~ 773 (1016)
++.++++ ++..+|+++ ++++++++.+++++|++++| |.+|.+. ..+++|.++|+++++++++|-+... ..
T Consensus 143 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~ 222 (403)
T PRK08636 143 VHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF 222 (403)
T ss_pred EEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhcc
Confidence 9999885 335788875 46666544468999999998 4678877 3578899999999999999976421 11
Q ss_pred cCcC-CC-Ccc--CCc--EEEeCccccccCCCCCCCCeEEEEEEccccccc
Q 001769 774 VGLT-SP-GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF 818 (1016)
Q Consensus 774 ~~l~-~p-g~~--GaD--i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~ 818 (1016)
.+.. .+ ..+ ..| |.+.|+.|+|++| |..+|+++.++++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~iv~~~~li~~ 269 (403)
T PRK08636 223 DGYKTPSILEVEGAKDVAVESYTLSKSYNMA----GWRVGFVVGNKKLVGA 269 (403)
T ss_pred CCCCCCChhcCCCccccEEEEEecccccCCc----cceeeeeeCCHHHHHH
Confidence 1110 11 111 123 4467899999655 5789999987766544
No 475
>PLN02231 alanine transaminase
Probab=99.21 E-value=1e-08 Score=123.90 Aligned_cols=365 Identities=12% Similarity=0.137 Sum_probs=197.7
Q ss_pred ccccc-CCCCCHHHHHHHHHHhCCCC--HHHhhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCC
Q 001769 97 TFARR-HNSATPEDQAKMSELVGLDN--LDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGM 173 (1016)
Q Consensus 97 ~f~~~-~i~~~~~~~~~ml~~~g~~~--~~~l~~~~iP~~~~~~~~~lp~~~~~~sE~e~~~~l~~la~~n~~~~~~lG~ 173 (1016)
+|.-| .|....+++++.|+. |.++ .++++. .+| ..|..++ .-.....+++-.+++..... ++ +.
T Consensus 70 ~y~vrg~~~~~a~~~~~~~~~-~~~~~pf~~~~~----~ni-g~p~~~~-----~~~~~~~r~v~~~~~~p~~i-~~-~~ 136 (534)
T PLN02231 70 EYAVRGEIVTIAQRLQEELKT-NPGSYPFDEILY----CNI-GNPQSLG-----QQPITFFREVLALCDHPSLL-DK-SE 136 (534)
T ss_pred hhhccchHHHHHHHHHHHHhc-CCCcCChhhhhh----hcc-CCHHHcC-----CCccHHHHHHHHhccCCccC-CC-CC
Confidence 45556 777777888888887 6543 344443 344 0111222 12234455566555443222 21 22
Q ss_pred CCCCCCChHHHH----HHHHhC-CCcccccCCChhHHhhhHHHHHHHHHHHHHHHc----C--CCCccEEEccchHHHHH
Q 001769 174 GYYNTHVPPVIL----RNIMEN-PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLT----G--LPMSNASLLDEGTAAAE 242 (1016)
Q Consensus 174 g~y~~~~p~~i~----~~i~~~-~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~----G--~~~anasl~~~~Taa~e 242 (1016)
| +...|..+. +.+.+. +.-..+|+| ++|.. ++++.||+++ | .++.++.+++|++.++.
T Consensus 137 ~--~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~-----s~G~~----~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~ 205 (534)
T PLN02231 137 T--HGLFSADAIERAWQILDQIPGRATGAYSH-----SQGIK----GLRDAIAAGIEARDGFPADPNDIFLTDGASPAVH 205 (534)
T ss_pred c--cccCCHHHHHHHHHHHHhcCCccccCcCC-----CCCcH----HHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHH
Confidence 2 222333332 222232 222344664 45644 3455666655 5 35578999999998888
Q ss_pred HHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----------hhhhc-cCC------CEeEEEEEc
Q 001769 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KDIDY-KSG------DVCGVLVQY 305 (1016)
Q Consensus 243 A~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----------~~L~~-l~~------~t~~V~v~~ 305 (1016)
.++.++.. .+||.|+++.-.++.+...++. .|.+++.+++ ++|++ +.+ +++++++.+
T Consensus 206 ~~~~~l~~--~~gd~Vli~~P~Y~~y~~~~~~----~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~n 279 (534)
T PLN02231 206 MMMQLLIR--SEKDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVIN 279 (534)
T ss_pred HHHHHhcc--CCCCEEEEeCCCChhHHHHHHH----cCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence 77766531 2689999999999988887653 4666666543 33444 332 688888888
Q ss_pred C-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC------CCC----cccc---e---EEEecC-ccc-cccC
Q 001769 306 P-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK------PPG----ELGA---D---IVVGSA-QRF-GVPM 363 (1016)
Q Consensus 306 p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~alg~l~------~pg----~~Ga---D---ivvgs~-k~l-g~P~ 363 (1016)
| |.+|.+. .+++|+++|+++|++++.+ +....-... +.. ++|. | |.++|. |.| +.|
T Consensus 280 P~NPTG~vls~e~l~~Iv~~a~~~~l~lI~D-EvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~p- 357 (534)
T PLN02231 280 PGNPTGQVLAEENQRDIVEFCKQEGLVLLAD-EVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGEC- 357 (534)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE-ccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCC-
Confidence 8 7999886 5788999999999999984 322211110 000 1121 2 334454 755 322
Q ss_pred CCCCcceEEEEe---ehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHHh--
Q 001769 364 GYGGPHAAFLAT---SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH-- 438 (1016)
Q Consensus 364 g~GGP~~Gfl~~---~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~~-- 438 (1016)
|=-.||+.+ .+++++.+ ++-+ ..+.|++.. +..++..+.-.
T Consensus 358 ---GlRiGy~~~~~~~~~l~~~l----------------------------~k~~-~~~~~s~~~--~Q~~~~~~l~~p~ 403 (534)
T PLN02231 358 ---GKRGGYMEVTGFTSDVREQI----------------------------YKVA-SVNLCSNIS--GQILASLVMSPPK 403 (534)
T ss_pred ---ccceEEEEEecCCHHHHHHH----------------------------HHHH-hhhcCCChH--HHHHHHHHhCCCC
Confidence 222467654 23443332 1111 134565432 22222211111
Q ss_pred -CcccH-------HHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC-------------HHHHHHHHH-H
Q 001769 439 -GPEGL-------KTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-------------AHAIASAAY-K 494 (1016)
Q Consensus 439 -g~~Gl-------~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~-------------~~~v~~~L~-~ 494 (1016)
|...+ +++.+...++.+++.+.|+++.|+++..+ .++--..+..+. ...++..|. +
T Consensus 404 ~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~ 483 (534)
T PLN02231 404 PGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNA 483 (534)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHh
Confidence 11122 23456777888999999998833776532 222111122221 112445555 5
Q ss_pred cCceeecc---c----CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 495 IEMNLRVV---D----SNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 495 ~GI~~~~~---~----~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
.||.+.+- . ...+|+++ ..++++++..++.|..
T Consensus 484 ~GV~vvPGs~Fg~~~g~~~~Rit~--~~~~e~l~eal~RL~~ 523 (534)
T PLN02231 484 TGIVVVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVSRLTE 523 (534)
T ss_pred cCEEEeCCcccCCCCCCCeEEEEe--CCCHHHHHHHHHHHHH
Confidence 69977442 1 23599987 4678888888887753
No 476
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.21 E-value=1.7e-09 Score=125.08 Aligned_cols=168 Identities=17% Similarity=0.196 Sum_probs=116.4
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCC
Q 001769 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1016)
Q Consensus 636 el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~i 715 (1016)
++++.+++.+|.+...+..++|++. +..++++.+. +++++|+++.+.++.+...++..|++++.++.++++.+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSED--LIAVICRAVL-----RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 5777888889988666666677542 3333334331 35789999988776666778899999999999888889
Q ss_pred CHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHH--cCcEEEEEccccccccCcCCCC------ccCC-c
Q 001769 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG------YIGA-D 785 (1016)
Q Consensus 716 D~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~--~g~lv~vDga~~~a~~~l~~pg------~~Ga-D 785 (1016)
|+++++++++ +++++|++++|+ .+|.+. +.+++.++++. .++++++|.+...-...-..|. +.+- -
T Consensus 148 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 148 DLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred CHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 9999999997 678899999995 689887 67666666654 4789999987521111100111 1111 2
Q ss_pred EEEeCccccccCCCCCCCCeEEEEEEc-cccccc
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPF 818 (1016)
Q Consensus 786 i~~~s~hK~~~~phg~GGPg~G~i~~~-~~l~~~ 818 (1016)
|++.|+.|.|++| |..+|++++. +++.+.
T Consensus 224 i~i~SfSK~~~l~----GlRiG~~i~~~~~l~~~ 253 (371)
T PRK05166 224 IVLRTFSKAYGLA----GLRVGYGLVSDPELVGL 253 (371)
T ss_pred EEEeechHhhhcc----hhheeeeecCCHHHHHH
Confidence 6677999998654 6789997764 444443
No 477
>PRK08175 aminotransferase; Validated
Probab=99.21 E-value=6e-09 Score=121.57 Aligned_cols=268 Identities=12% Similarity=0.109 Sum_probs=162.9
Q ss_pred HHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.+|+++ |. ++. ++.+++|++.+...++.++. ++||+|++++-.|+.....++. .|++++.++.
T Consensus 72 lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~---~~gd~Vlv~~P~y~~~~~~~~~----~g~~~~~v~~ 144 (395)
T PRK08175 72 LRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL---DHGDTVLVPNPSYPIHIYGAVI----AGAQVRSVPL 144 (395)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC---CCCCEEEEcCCCCcchHHHHHH----cCCeEEEEec
Confidence 445555554 44 344 68888999888776665552 3799999999999987776643 4777777654
Q ss_pred h-------hhhc-cC---CCEeEEEEEcC-CCCeeeccH---HHHHHHHHhCCcEEEEEeccccccCC-----CC----C
Q 001769 289 K-------DIDY-KS---GDVCGVLVQYP-GTEGEVLDY---GDFIKNAHANGVKVVMATDLLALTIL-----KP----P 344 (1016)
Q Consensus 289 ~-------~L~~-l~---~~t~~V~v~~p-n~~G~i~dl---~eI~~lah~~GalviV~a~~~alg~l-----~~----p 344 (1016)
+ ++++ +. +++++|++.+| |.+|.+.+. ++|+++|+++|++++++ +....... .+ +
T Consensus 145 ~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~D-e~y~~l~~~~~~~~~~~~~~ 223 (395)
T PRK08175 145 VEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHD-LAYADIVYDGWKAPSIMQVP 223 (395)
T ss_pred ccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEe-cchHhhccCCCCCcchhcCC
Confidence 2 3444 33 47889998887 689988776 79999999999999994 22211010 01 1
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 345 g~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
+..+..|+++|. |.||.| |=-.||++.++++++.+- +.+...+.+++
T Consensus 224 ~~~~~~i~~~S~SK~~g~p----GlRiG~~~~~~~l~~~~~----------------------------~~~~~~~~~~~ 271 (395)
T PRK08175 224 GAKDVAVEFFTLSKSYNMA----GWRIGFMVGNPELVSALA----------------------------RIKSYHDYGTF 271 (395)
T ss_pred CcccCEEEEeeccccccCc----chhheeeeCCHHHHHHHH----------------------------HHHhhcccCCC
Confidence 112334667776 877543 112588888777766541 00001112222
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCCCccEEEEecCC------HHHHHHHHH-HcC
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD------AHAIASAAY-KIE 496 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~~~~~~v~i~~~~------~~~v~~~L~-~~G 496 (1016)
......+..+ + -...+-++++.++..++.+++.+.|+++| +.+..+..-.-+.++++. +.++.++|. ++|
T Consensus 272 ~~~q~~~~~~-l-~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~g 348 (395)
T PRK08175 272 TPLQVAAIAA-L-EGDQQCVRDIAEQYKRRRDVLVKGLHEAG-WMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAK 348 (395)
T ss_pred cHHHHHHHHH-H-hCcHHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCC
Confidence 2211111111 1 11233467777888888899999999886 765422111113334332 478887765 679
Q ss_pred ceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 497 MNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 497 I~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
|.+... .++.+|+++. .+.+.+.+.++.|.
T Consensus 349 v~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~ 384 (395)
T PRK08175 349 VCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIK 384 (395)
T ss_pred EEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence 987542 1368999986 46677776666664
No 478
>PRK07046 aminotransferase; Validated
Probab=99.20 E-value=4.9e-10 Score=132.70 Aligned_cols=252 Identities=15% Similarity=0.119 Sum_probs=161.0
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..||++.+++..+...+...-..+. .+ . +...++.+.|+++++++.+ .+.+||++++++++..+|+|
T Consensus 87 ~~lGh~~p~i~~Av~~q~~~~~~~~--~~-~---------~~~~~lAe~l~~~~~~~~v-~F~nSGtEA~e~AlrlAR~~ 153 (453)
T PRK07046 87 AMFGHSPAPVARALAEQARRGLTTM--LP-S---------EDAAWVGEELARRFGLPYW-QVATTATDANRFVLRWARAV 153 (453)
T ss_pred cccCCCCHHHHHHHHHHHHhCCCCC--CC-C---------HHHHHHHHHHHHHhCCCEE-EEECCHHHHHHHHHHHHHHh
Confidence 4578887777666655532211111 11 1 2344788889999886654 66899999999999988887
Q ss_pred HHhcCCCCCCEEEE-cCCCccccHHHHH------------hCCc------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEE
Q 001769 672 HKARGDHHRNVCII-PVSAHGTNPATAA------------MCGM------KIVSVGTDAKGNINIEELRKAAEANRDNLS 732 (1016)
Q Consensus 672 ~~~~g~~~~~~Vlv-~~saHg~~~~~a~------------~~G~------~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~ 732 (1016)
..|++|+. ....||.+..... ..|+ .+..++. .|++++++.+. .++++
T Consensus 154 ------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~--~~~vA 220 (453)
T PRK07046 154 ------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALA--DGDVA 220 (453)
T ss_pred ------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhC--CCCeE
Confidence 23455554 6678997543321 1121 1233333 38999999995 36899
Q ss_pred EEEEEcC-CCCcccccc---HHHHHHHHHHcCcEEEEEccccc--cccCcCCCCccCCcEEEeCccccccCCCCCCCCeE
Q 001769 733 TLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMN--AQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGM 806 (1016)
Q Consensus 733 ~v~i~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~--a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~ 806 (1016)
+|+++-- ...|.+.++ ++++.++|+++|+++|+|-++++ +.++...-...-+|++++ -|.+ ++|-| +
T Consensus 221 avi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~--gK~l----ggG~P-i 293 (453)
T PRK07046 221 AVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVV--GKPI----AGGVP-C 293 (453)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceee--hhhh----cCCCc-c
Confidence 9999853 455766533 79999999999999999988762 344332111234798875 4777 44556 7
Q ss_pred EEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 001769 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1016)
Q Consensus 807 G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L 886 (1016)
|.+++++++.+.+..... ..........+++.|+++.++++.+.|..+-.+++ .++.....++|.++|
T Consensus 294 ~av~g~~~i~~~~~~~~~---------~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~---~~~~~~~g~~l~~~L 361 (453)
T PRK07046 294 AVYGFSAELAERAQAAKA---------SAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA---YAHMLALAARLAAGL 361 (453)
T ss_pred eeeeehHHHHHHHhhccc---------cCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHH
Confidence 788888876654311000 00000112234577888999999999998855543 556777888998888
Q ss_pred hc
Q 001769 887 EK 888 (1016)
Q Consensus 887 ~~ 888 (1016)
++
T Consensus 362 ~~ 363 (453)
T PRK07046 362 RA 363 (453)
T ss_pred HH
Confidence 75
No 479
>PRK07908 hypothetical protein; Provisional
Probab=99.20 E-value=1.9e-09 Score=123.51 Aligned_cols=211 Identities=14% Similarity=0.081 Sum_probs=130.5
Q ss_pred HHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCC
Q 001769 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1016)
Q Consensus 636 el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~i 715 (1016)
++++.+++.+|.+...+..++|++- +..++++ + .+ +.+++..+.+......++..|++++.+++++++.+
T Consensus 62 ~lr~aia~~~~~~~~~I~it~Ga~~--al~~~~~-l------~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~ 131 (349)
T PRK07908 62 RARAAVAARHGRTPDEVLLLAGAAE--GFALLAR-L------RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRL 131 (349)
T ss_pred HHHHHHHHHhCcChhhEEECCCHHH--HHHHHHh-c------CC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCcccCc
Confidence 5677788888888766666666542 2333333 2 13 34666655554445567789999999999877788
Q ss_pred CHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccccccCcCCC-CccCC-c-EEEeCc
Q 001769 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYIGA-D-VCHLNL 791 (1016)
Q Consensus 716 D~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~p-g~~Ga-D-i~~~s~ 791 (1016)
|++++ + ++++++++.+|+ .+|.+. +.++|.++|+ ++.++++|.++..-..+-..+ ..... + +++.|+
T Consensus 132 d~~~l----~---~~~~~i~l~np~NPTG~~~-~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~ 202 (349)
T PRK07908 132 DPAAV----P---DDADLVVIGNPTNPTSVLH-PAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSL 202 (349)
T ss_pred ChhHh----c---cCCCEEEEcCCCCCCCCCc-CHHHHHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeec
Confidence 88854 4 567889999985 789998 7999999997 478899998753111111111 11122 3 455599
Q ss_pred cccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHH
Q 001769 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1016)
Q Consensus 792 hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~ 871 (1016)
+|+|++| |..+|++++++++.+.+.... ...++++ ....++.+++...+.+-++++
T Consensus 203 SK~~~l~----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~------~~~~a~~~~~~~~~~~~~~~~ 258 (349)
T PRK07908 203 TKTWSLA----GLRVGYALGAPDVLARLTRGR--------------AHWPVGT------LQLEAIAACCAPRAVAEAAAD 258 (349)
T ss_pred ccccCCc----cceeeeeecCHHHHHHHHhcC--------------CCCCccH------HHHHHHHHHhcccchHHHHHH
Confidence 9998654 577899999877665442110 0011111 112222333332222335566
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 001769 872 SKIAILNANYMAKRLEKH 889 (1016)
Q Consensus 872 ~~~~~~nA~yla~~L~~~ 889 (1016)
.+....+.+++.+.|++.
T Consensus 259 ~~~~~~~r~~l~~~L~~~ 276 (349)
T PRK07908 259 AARLAADRAEMVAGLRAV 276 (349)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 667777788888888763
No 480
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.20 E-value=1.1e-09 Score=129.22 Aligned_cols=209 Identities=13% Similarity=0.084 Sum_probs=131.5
Q ss_pred eeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCCCCHHHHHHHHHcCCCC
Q 001769 651 SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDN 730 (1016)
Q Consensus 651 ~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~iD~~~L~~~i~~~~~~ 730 (1016)
.+..++|++. +..++++.+. .++|.|+++++.++.+...+++.|++++.++++++| +|+++|+++++ ++
T Consensus 143 ~Iiit~G~~~--al~~~~~~l~-----~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~---~~ 211 (431)
T PRK15481 143 EIDLTSGAID--AIERLLCAHL-----LPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALA---QG 211 (431)
T ss_pred eEEEecCcHH--HHHHHHHHhC-----CCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHh---cC
Confidence 4555556542 3334444331 367899999998888888899999999999998766 89999999997 67
Q ss_pred EEEEEEE-cC-CCCccccccH---HHHHHHHHHc-CcEEEEEccccccc-cCcCCCC--ccCCcEEEeCccccccCCCCC
Q 001769 731 LSTLMVT-YP-STHGVYEEGI---DEICKIIHDN-GGQVYMDGANMNAQ-VGLTSPG--YIGADVCHLNLHKTFCIPHGG 801 (1016)
Q Consensus 731 t~~v~i~-~P-n~~G~i~~di---~~I~~ia~~~-g~lv~vDga~~~a~-~~l~~pg--~~GaDi~~~s~hK~~~~phg~ 801 (1016)
++++++. +| |.+|.+. +. ++|.++|+++ +++++.|-+...-. .....+. +..--+++.|++|+|+ |
T Consensus 212 ~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~--- 286 (431)
T PRK15481 212 ARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-P--- 286 (431)
T ss_pred CCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-C---
Confidence 8888887 78 4688887 45 4999999999 99999997642110 0111111 1122377789999996 5
Q ss_pred CCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhCh--hhHHHHHHHHHHHH
Q 001769 802 GGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS--KGLTEASKIAILNA 879 (1016)
Q Consensus 802 GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~--eGl~~~~~~~~~nA 879 (1016)
|..+|++++++++.+.+-. . .......+ +.....++..+|.. |. +-+++..+....+-
T Consensus 287 -GlRiG~~i~~~~~~~~~~~-~-----------~~~~~~~~------s~~~q~a~~~~l~~-~~~~~~l~~~~~~~~~~r 346 (431)
T PRK15481 287 -DLRLAFVASDSATSARLRL-R-----------LNSGTQWV------SHLLQDLVYACLTD-PEYQARLAQARLFYAQRR 346 (431)
T ss_pred -CceeEEEeCCHHHHHHHHH-H-----------HhccccCC------CHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHH
Confidence 5779999988766544310 0 00000111 12222333344432 21 11455566666777
Q ss_pred HHHHHHHhc-cCCcccc
Q 001769 880 NYMAKRLEK-HYPILFR 895 (1016)
Q Consensus 880 ~yla~~L~~-~~~v~y~ 895 (1016)
+++.+.|++ ++++..|
T Consensus 347 ~~~~~~L~~~~~~~~~p 363 (431)
T PRK15481 347 QKLARALQQYGIAIPSP 363 (431)
T ss_pred HHHHHHHHHcCCccccC
Confidence 778888876 3444333
No 481
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.20 E-value=4.2e-09 Score=121.58 Aligned_cols=267 Identities=13% Similarity=0.077 Sum_probs=166.5
Q ss_pred HHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCch---
Q 001769 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1016)
Q Consensus 214 ~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~g-d~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~~--- 289 (1016)
.++++.+|+++|.++.++.+.+|++.++..++.++. .++ ++|+++.-.++.+.... +..|++++.++++
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~---~~g~~~vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALC---VPGRDAVLVTPPVFGMYAVCA----RLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhc---CCCCCeEEEcCCChHHHHHHH----HHcCCEEEEEecCCCc
Confidence 356788999999999999999999988777766653 256 78999987777555443 3458888777641
Q ss_pred --------hhhc--cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEecccc-ccCCCC----CCcccceE
Q 001769 290 --------DIDY--KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLA-LTILKP----PGELGADI 351 (1016)
Q Consensus 290 --------~L~~--l~~~t~~V~v~~p-n~~G~i~dl~eI~~lah~--~GalviV~a~~~a-lg~l~~----pg~~GaDi 351 (1016)
++.+ ..+++++|++.+| |.+|.+.|.+++.++++. .++++++| +... +..-.. .....==|
T Consensus 135 ~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~D-eay~~f~~~~~~~~~~~~~~~vi 213 (364)
T PRK04781 135 DGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVD-EAYGEFSDVPSAVGLLARYDNLA 213 (364)
T ss_pred cCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEe-CcchhhcCCcchHHHHhhCCCEE
Confidence 2222 3568899999888 689999998888888765 37788773 3221 211001 01111125
Q ss_pred EEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHH
Q 001769 352 VVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (1016)
Q Consensus 352 vvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~ 430 (1016)
+++|. |.||.| |=-.||+.+.+++++.+-. -+...++.+ + +..
T Consensus 214 ~~~SfSK~~gl~----GlRvGy~v~~~~l~~~l~~----------------------------~~~~~~~~~---~-~~~ 257 (364)
T PRK04781 214 VLRTLSKAHALA----AARIGSLIANAELIAVLRR----------------------------CQAPYPVPT---P-CAA 257 (364)
T ss_pred EEecChhhcccc----cceeeeeeCCHHHHHHHHh----------------------------ccCCCCCCH---H-HHH
Confidence 67776 888654 2236888888777665510 000111111 1 111
Q ss_pred HHHHHHHhCc-ccHHHHHHHHHHHHHHHHHHHhcCCCeE-EcCCCCccEEEEecCCHHHHHHHHHHcCceeeccc-----
Q 001769 431 AAMYAVYHGP-EGLKTIAQRVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD----- 503 (1016)
Q Consensus 431 Aa~y~~~~g~-~Gl~~ia~~~~~~a~~L~~~L~~~G~~~-l~~~~~~~~v~i~~~~~~~v~~~L~~~GI~~~~~~----- 503 (1016)
++..+...+. +-+.+..++..++.+++.+.|++++++. +..+. -.-+.++++...++.+.|.++||.++...
T Consensus 258 ~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~-g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~ 336 (364)
T PRK04781 258 LAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQ-GNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPRL 336 (364)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCC-CcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCCC
Confidence 2221111221 1123334456677788999998884363 43221 11244555567788999999999886532
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 504 SNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 504 ~~~lris~te~~t~edid~ll~aL~ 528 (1016)
++++||++. +.++.++|+++|.
T Consensus 337 ~~~~Ris~~---~~~~~~~l~~al~ 358 (364)
T PRK04781 337 SDALRITLG---TPEQNDRVLAALQ 358 (364)
T ss_pred CCeEEEeCC---CHHHHHHHHHHHH
Confidence 468999987 6899999999985
No 482
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.20 E-value=1.4e-09 Score=125.73 Aligned_cols=217 Identities=15% Similarity=0.149 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g~ 714 (1016)
.++++.+++.+|++...+..++|++.. ...+++.+. ++++.|++++..|..+...+...|.+++.+|.+.++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~--l~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~- 141 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGL--LGLIVRLYV-----EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR- 141 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence 367788888889886667777776532 223333221 357899999987776666677899999999987665
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHH--cCcEEEEEccccc-cccCcCCCC-ccCC-cEEE
Q 001769 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMN-AQVGLTSPG-YIGA-DVCH 788 (1016)
Q Consensus 715 iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~--~g~lv~vDga~~~-a~~~l~~pg-~~Ga-Di~~ 788 (1016)
+|++++.+.+. .+++++|++++|+ .+|.+. +.+++.++++. +|+++++|.+... ...+...+. .... -+++
T Consensus 142 ~~~~~l~~~~~--~~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 142 EDLDALLDAAR--RENAPLVYLANPDNPMGSWH-PAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCHHHHHHHhc--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 79999987764 2678899999995 589887 66666666654 3899999976421 101100110 1111 2667
Q ss_pred eCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhH
Q 001769 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1016)
Q Consensus 789 ~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl 868 (1016)
.++.|.|++| |..+|++++++++.+.+-.. .....+ +.....++.++|. ..+-+
T Consensus 219 ~SfSK~~g~~----GlRiG~~v~~~~~~~~l~~~--------------~~~~~~------s~~~q~~~~~~l~--~~~~~ 272 (369)
T PRK08153 219 RTFSKAYGLA----GARVGYAIGAPGTIKAFDKV--------------RNHFGM------NRIAQAAALAALK--DQAYL 272 (369)
T ss_pred ecchHhccCc----chheeeeecCHHHHHHHHHh--------------hcCCCC------CHHHHHHHHHHhc--CHHHH
Confidence 7889998654 56789999887665433110 000111 2233333444443 12335
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 001769 869 TEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 869 ~~~~~~~~~nA~yla~~L~~ 888 (1016)
++..+....+.+++.+.|++
T Consensus 273 ~~~~~~~~~~r~~~~~~L~~ 292 (369)
T PRK08153 273 AEVVGKIAAARDRIAAIARA 292 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55566666777788888876
No 483
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.20 E-value=1.2e-09 Score=128.08 Aligned_cols=246 Identities=16% Similarity=0.181 Sum_probs=154.4
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~ 671 (1016)
..||++.+.+..+...+....... ...|.. +...++.+.|+++++.+. .++.+||+++++++++++|.|
T Consensus 51 ~~lGh~~p~v~~A~~~~~~~~~~~--~~~~~~--------~~~~~la~~l~~~~~~~~-v~~~~sGseA~e~Alk~ar~~ 119 (406)
T PRK12381 51 NALGHAHPALREALNEQASKFWHT--GNGYTN--------EPVLRLAKKLIDATFADR-VFFCNSGAEANEAALKLARKY 119 (406)
T ss_pred ccCCCCCHHHHHHHHHHHhhcccc--cCccCC--------HHHHHHHHHHHhhCCCCe-EEEcCCcHHHHHHHHHHHHHH
Confidence 468887766655555443221111 111211 123478889999987764 477899999999999999988
Q ss_pred HHhcCCCCCCEEEE-cCCCccccHHHHHhCCc------------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001769 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1016)
Q Consensus 672 ~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~G~------------~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~ 738 (1016)
...++..++.+|+. ..+.||.........|. .++.++. .|++++++.++ +++++|+++.
T Consensus 120 ~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~---~~~aaviiEP 191 (406)
T PRK12381 120 AHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALID---DQTCAVIVEP 191 (406)
T ss_pred HhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhcc---CCeeEEEEeC
Confidence 54433224455554 66788876544433331 1233333 48999999997 7899999974
Q ss_pred CC-CCcccc---ccHHHHHHHHHHcCcEEEEEccccccccCcCCCC------c--cCCcEEEeCccccccCCCCCCCCeE
Q 001769 739 PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------Y--IGADVCHLNLHKTFCIPHGGGGPGM 806 (1016)
Q Consensus 739 Pn-~~G~i~---~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg------~--~GaDi~~~s~hK~~~~phg~GGPg~ 806 (1016)
-+ +.|++. ..+++|.++|++||+++++|-+++ ++ .+.| . ..+|++++ .|.++ ||.-+
T Consensus 192 v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~---gr~G~~~~~~~~~v~pDi~t~--sK~l~-----gG~~i 260 (406)
T PRK12381 192 IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-GV---GRTGELYAYMHYGVTPDVLTT--AKALG-----GGFPI 260 (406)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-CC---CCCcchhhhHhhCCCCCEEEe--hhhhh-----CCCce
Confidence 33 345442 478999999999999999998763 22 1222 1 23576544 58774 34558
Q ss_pred EEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 001769 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1016)
Q Consensus 807 G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L 886 (1016)
|.+++++++.+.+.... . + +++.|+...++.+.+.|..+-.+. +.++..++.+++.++|
T Consensus 261 g~~~~~~~~~~~~~~~~--------------~-~---~t~~~~pl~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L 319 (406)
T PRK12381 261 GAMLTTEKCASVMTVGT--------------H-G---TTYGGNPLASAVAGKVLELINTPE---MLNGVKQRHDWFVERL 319 (406)
T ss_pred EEEEEcHHHHhhcCCCC--------------C-C---CCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHH
Confidence 88888887766542110 0 0 113345566666677676664433 4566777888999988
Q ss_pred hc
Q 001769 887 EK 888 (1016)
Q Consensus 887 ~~ 888 (1016)
++
T Consensus 320 ~~ 321 (406)
T PRK12381 320 NT 321 (406)
T ss_pred HH
Confidence 76
No 484
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.20 E-value=1.1e-09 Score=126.61 Aligned_cols=178 Identities=16% Similarity=0.180 Sum_probs=122.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCC--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEE
Q 001769 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 628 qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv 705 (1016)
+|..++...+.+++.+..|.+ ...+..++|++. +..++++.+. ++++.|+++.+.+..+...+...|.+++
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~--~l~~~~~~~~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~ 137 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNE--ILQQLLQAFG-----GPGRTALGFVPSYSMHPIIARGTHTEWV 137 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHhcCCeeE
Confidence 355556666666666665654 445666777542 3334444431 3578899998877777777889999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHHcCcEEEEEccccc-cccCcCCCCc--
Q 001769 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN-AQVGLTSPGY-- 781 (1016)
Q Consensus 706 ~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~~g~lv~vDga~~~-a~~~l~~pg~-- 781 (1016)
.++.++++.+|++++++++++ .++++|++++|+ .+|.+. +.+++.++++.+++++++|.++.. ...+......
T Consensus 138 ~~~~~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 138 EGPRAADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPTGTAL-PLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred EcccCCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 988776778999999999973 467788899995 689998 899999999988999999987631 1011101000
Q ss_pred -cCCc-EEEeCccccccCCCCCCCCeEEEEEEcccccccC
Q 001769 782 -IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 819 (1016)
Q Consensus 782 -~GaD-i~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l 819 (1016)
...+ +++.|+.|.|++| |..+|++++++++...+
T Consensus 215 ~~~~~~i~~~SfSK~~g~~----GlRiG~~~~~~~~~~~l 250 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFAFA----GGRLGYLAAAPAVVDAL 250 (368)
T ss_pred HhCCCEEEEEechhhhccc----hhhhhhhhCCHHHHHHH
Confidence 1123 4566899998544 45689999887766544
No 485
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.19 E-value=7.9e-10 Score=131.36 Aligned_cols=243 Identities=19% Similarity=0.245 Sum_probs=155.6
Q ss_pred cccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHhC-CCceeeecCChHHHHHHHHHHHHH
Q 001769 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 670 (1016)
Q Consensus 592 i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~G-~~~~~l~~~sGa~ae~a~l~air~ 670 (1016)
..||+|.+++..++..+......|. .|. +...++.++|++++. ++. .++.+||++++++++..+|+
T Consensus 111 ~~lGh~~p~v~~av~~ql~~~~~~~--~~~----------~~~~~lAe~l~~~~p~~~~-v~f~~SGsEA~e~AlklAR~ 177 (474)
T PLN02482 111 AIIGHADDEVLAALAETMKKGTSFG--APC----------LLENVLAEMVIDAVPSVEM-VRFVNSGTEACMGVLRLARA 177 (474)
T ss_pred cccCCCCHHHHHHHHHHHhhCCCCC--CCC----------HHHHHHHHHHHHhCCCCCE-EEEeCChHHHHHHHHHHHHH
Confidence 3577777666666555543222221 111 233477888888874 333 46689999999999999888
Q ss_pred HHHhcCCCCCCEEEE-cCCCccccHHHHHh-------------CCc------EEEEEcCCCCCCCCHHHHHHHHHcCCCC
Q 001769 671 YHKARGDHHRNVCII-PVSAHGTNPATAAM-------------CGM------KIVSVGTDAKGNINIEELRKAAEANRDN 730 (1016)
Q Consensus 671 ~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~-------------~G~------~vv~v~~d~~g~iD~~~L~~~i~~~~~~ 730 (1016)
| .+|++|+. ....||........ .|+ .+..++. .|++++++.++++.++
T Consensus 178 ~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~ 246 (474)
T PLN02482 178 Y------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGE 246 (474)
T ss_pred h------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCc
Confidence 7 23455554 66789865322111 111 1222332 3899999999766678
Q ss_pred EEEEEEEcC-CCCcccccc---HHHHHHHHHHcCcEEEEEccccccccCcCCCC------cc--CCcEEEeCccccccCC
Q 001769 731 LSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIP 798 (1016)
Q Consensus 731 t~~v~i~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg------~~--GaDi~~~s~hK~~~~p 798 (1016)
+++|+++.. +..|.+.++ +++|.++|+++|+++|+|-+++ |+ +-+ .+ .+|++++ -|.+
T Consensus 247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t----Gf-R~g~~ga~~~~gv~PDi~t~--gK~l--- 316 (474)
T PLN02482 247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT----GF-RIAYGGAQEYFGITPDLTTL--GKVI--- 316 (474)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----Ce-ecCcchHhHHhCCCCCEEEe--cchh---
Confidence 899988863 456776522 5689999999999999998764 22 221 12 3688765 3776
Q ss_pred CCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChhhHHHHHHHHHHH
Q 001769 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1016)
Q Consensus 799 hg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~eGl~~~~~~~~~n 878 (1016)
|+|-| +|.+++++++.+.+... + .....+++.|++..++++.+.|..+..++ +.++...+
T Consensus 317 -ggG~P-igav~g~~ei~~~~~~~-----~----------~~~~~~T~~gnpl~~aAala~L~~l~~~~---~~~~~~~~ 376 (474)
T PLN02482 317 -GGGLP-VGAYGGRREIMEMVAPA-----G----------PMYQAGTLSGNPLAMTAGIHTLKRLQQPG---TYEYLDKI 376 (474)
T ss_pred -hCCCc-eEEEEEcHHHHHhhccC-----C----------CcccccCcchhHHHHHHHHHHHHHHhccC---HHHHHHHH
Confidence 44546 55667887776654210 0 00112346678888888999999986655 45677778
Q ss_pred HHHHHHHHhc
Q 001769 879 ANYMAKRLEK 888 (1016)
Q Consensus 879 A~yla~~L~~ 888 (1016)
.++|.++|++
T Consensus 377 g~~l~~~L~~ 386 (474)
T PLN02482 377 TKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHH
Confidence 9999999986
No 486
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.19 E-value=8.9e-09 Score=120.88 Aligned_cols=269 Identities=10% Similarity=0.107 Sum_probs=161.2
Q ss_pred HHHHHHHHcC------------CCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001769 216 FQTMIADLTG------------LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1016)
Q Consensus 216 ~q~~iA~L~G------------~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v 283 (1016)
+++.+|++++ .+..++.+++|++.++..++.++. ++||+|+++.-.|+.+...++ ..|+++
T Consensus 80 Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~---~~gd~vlv~~P~y~~~~~~~~----~~g~~~ 152 (412)
T PTZ00433 80 AREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALC---DEGDNILVPAPGFPHYETVCK----AYGIEM 152 (412)
T ss_pred HHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhc---CCCCEEEEccCCcccHHHHHH----HcCCEE
Confidence 5567777664 456789999999988877776663 378999999999998877754 357777
Q ss_pred EEeCc----------hhhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEecccc-c--cC-C-CC
Q 001769 284 VVSDL----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLA-L--TI-L-KP 343 (1016)
Q Consensus 284 ~~vd~----------~~L~~-l~~~t~~V~v~~p-n~~G~i~---dl~eI~~lah~~GalviV~a~~~a-l--g~-l-~~ 343 (1016)
+.+++ +++++ +.+++++|++.+| |.+|.+. ++++|+++|+++|++++++. ... + .. . .+
T Consensus 153 ~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De-~y~~~~~~~~~~~~ 231 (412)
T PTZ00433 153 RFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDE-IYAGMVFNGATFTS 231 (412)
T ss_pred EEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEec-cccccccCCCCccc
Confidence 76654 23444 5667899999998 6799765 57888999999999999942 221 1 10 0 00
Q ss_pred CCcc---cceEEEecC-ccccccCCCCCcceEEEEee------hhhhhcCCCceEeeeecCCCCcceeeecccccccccc
Q 001769 344 PGEL---GADIVVGSA-QRFGVPMGYGGPHAAFLATS------QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1016)
Q Consensus 344 pg~~---GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~------~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRR 413 (1016)
...+ .-=|+++|. |.|+.| |=-.||+.+. +++++.+ ++
T Consensus 232 ~~~~~~~~~~i~~~SfSK~~~~p----GlRlG~~i~~~p~~~~~~~~~~~----------------------------~~ 279 (412)
T PTZ00433 232 VADFDTTVPRVILGGTAKNLVVP----GWRLGWLLLVDPHGNGGDFLDGM----------------------------KR 279 (412)
T ss_pred hhhccCCCceEEEccchhhcCCC----CeeEEEEEEeCCcccHHHHHHHH----------------------------HH
Confidence 0111 112556665 777543 2235777751 2222221 01
Q ss_pred cccCCccchhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC------CH
Q 001769 414 DKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA------DA 485 (1016)
Q Consensus 414 ekaTsnicT~~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~------~~ 485 (1016)
-+ ....+++......++.+ +.-....=++++.+++.++.+++.+.|++..++.+..+ .+|--+.+... ..
T Consensus 280 ~~-~~~~~~~~~~q~a~~~~-l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~ 357 (412)
T PTZ00433 280 LG-MLVCGPCSVVQAALGEA-LLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSD 357 (412)
T ss_pred Hh-hccCCCChHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCH
Confidence 00 00011112211111111 11111223667777888888899999988632654322 22211223211 25
Q ss_pred HHHHHHHH-HcCceeecc----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 486 HAIASAAY-KIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 486 ~~v~~~L~-~~GI~~~~~----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+.|. ++||.+... .++.+|+++.. .++++++.++.|.
T Consensus 358 ~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~~al~~l~ 403 (412)
T PTZ00433 358 VEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLREAVERIK 403 (412)
T ss_pred HHHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 67888887 479987542 25789999974 4778887777775
No 487
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.19 E-value=1.9e-09 Score=126.52 Aligned_cols=219 Identities=15% Similarity=0.212 Sum_probs=141.0
Q ss_pred HHHHHHHHHhccccCCCccccccccccCC----CChhhhhcc-----cccccccccCCCCCchhhhhHHHHHHHHHHHHH
Q 001769 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMK----LNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLC 642 (1016)
Q Consensus 572 e~~r~l~~l~~~n~~~~~~~i~LGs~t~~----~~~~~~~~~-----~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~la 642 (1016)
..++.++++-..+. ...+|+|+.|.|. +++...... +..+.+. -|.| .+|..++...+.+++.
T Consensus 17 ~~~~~~~~~~~~~~--~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~---~Y~~---~~G~~~lr~aia~~~~ 88 (409)
T PLN00143 17 DAVKFLKENFNEDD--HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFN---SYAP---TGGILPARRAIADYLS 88 (409)
T ss_pred HHHHHHHHhcccCC--CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCC---CCCC---CCCCHHHHHHHHHHHH
Confidence 44555554333332 3467899888876 444322211 1112222 2444 4576666666666666
Q ss_pred HHhCCC--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCC-C-CCCCHH
Q 001769 643 TITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIE 718 (1016)
Q Consensus 643 eL~G~~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~-~-g~iD~~ 718 (1016)
+-.|.+ ...+..+.|++. +..++++.+. .+++.|+++.+.+..+...+...|.+++.++.++ + ..+|++
T Consensus 89 ~~~g~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 161 (409)
T PLN00143 89 NDLPYQLSPDDVYLTLGCKH--AAEIIIKVLA-----RPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLD 161 (409)
T ss_pred hhcCCCCCHhhEEEecChHH--HHHHHHHHHc-----CCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHH
Confidence 555543 334555566542 3344444431 3578999999988778788889999999999853 3 468999
Q ss_pred HHHHHHHcCCCCEEEEEEEcCC-CCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccCc-CCC-CccCC---cEEEe
Q 001769 719 ELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL-TSP-GYIGA---DVCHL 789 (1016)
Q Consensus 719 ~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~l-~~p-g~~Ga---Di~~~ 789 (1016)
+|+++++ ++++++++.+|| .+|.+. ..+++|.++|+++|+++++|.+... ...+. ..| ..+.. =|++.
T Consensus 162 ~l~~~~~---~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~ 238 (409)
T PLN00143 162 AVEAIAD---ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLG 238 (409)
T ss_pred HHHHhcc---cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEc
Confidence 9999887 788999999995 688886 2478889999999999999977531 11110 011 11111 15677
Q ss_pred CccccccCCCCCCCCeEEEEEEc
Q 001769 790 NLHKTFCIPHGGGGPGMGPIGVK 812 (1016)
Q Consensus 790 s~hK~~~~phg~GGPg~G~i~~~ 812 (1016)
|+.|.|++| |..+|++++.
T Consensus 239 SfSK~f~~p----GlRvG~~v~~ 257 (409)
T PLN00143 239 SISKRWMIP----GWGLGWLVTC 257 (409)
T ss_pred cchhhcCCC----ccceEEEEee
Confidence 999998665 6789999983
No 488
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.19 E-value=1.3e-09 Score=127.12 Aligned_cols=220 Identities=15% Similarity=0.193 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHh-cCC-CCCCEEE-EcCCCccccHHHHHhCCc-------
Q 001769 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGM------- 702 (1016)
Q Consensus 633 ~~~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~-~g~-~~~~~Vl-v~~saHg~~~~~a~~~G~------- 702 (1016)
...++++.+++++|++. .++.+||++++++++..++.|... +|. ..+++|+ .....||.........+-
T Consensus 74 ~~~~~~~~l~~~~~~~~-~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~ 152 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDK-VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF 152 (400)
T ss_pred HHHHHHHHHHhCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC
Confidence 55688899999998875 467889999999998888765422 221 1234454 466778876554332221
Q ss_pred -----EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCCcccccc---HHHHHHHHHHcCcEEEEEccccccc
Q 001769 703 -----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ 773 (1016)
Q Consensus 703 -----~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~P-n~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~a~ 773 (1016)
.++.++. .|+++|+++++ .+++++|+++.+ |.+|.+.++ +++|.++|+++|+++++|.+++ ++
T Consensus 153 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~ 224 (400)
T PTZ00125 153 GPFVPGFELVDY-----NDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GL 224 (400)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CC
Confidence 1222222 48999999996 267999999876 567887622 9999999999999999998764 22
Q ss_pred c--Cc-CCC--CccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccc
Q 001769 774 V--GL-TSP--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1016)
Q Consensus 774 ~--~l-~~p--g~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G 848 (1016)
+ +- ... .....|+++++ |+|+ +|++.+|++++++++.+.+..... + +++.+
T Consensus 225 g~~G~~~~~~~~~~~pd~~~~s--K~l~----~g~~~ig~v~~~~~~~~~~~~~~~---------------~---~t~~~ 280 (400)
T PTZ00125 225 GRTGKLLAHDHEGVKPDIVLLG--KALS----GGLYPISAVLANDDVMLVIKPGEH---------------G---STYGG 280 (400)
T ss_pred CccchhhHHHhcCCCCCEEEEc--cccc----CCCcCcEEEEEcHHHHhhccCCCC---------------C---CCCCc
Confidence 2 10 011 12236888764 9884 344568999999877665421100 0 01222
Q ss_pred hhhHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 001769 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 849 ~a~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+...+.++.+.|..+-.+++. ++...+++++.++|++
T Consensus 281 ~~~~~~aa~~~l~~i~~~~~~---~~~~~~~~~l~~~l~~ 317 (400)
T PTZ00125 281 NPLACAVAVEALEVLKEEKLA---ENAQRLGEVFRDGLKE 317 (400)
T ss_pred CHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHH
Confidence 344555556666666445554 3444577888888876
No 489
>PRK09148 aminotransferase; Validated
Probab=99.19 E-value=1.8e-08 Score=118.14 Aligned_cols=266 Identities=9% Similarity=0.052 Sum_probs=163.2
Q ss_pred HHHHHHHHc----CC--CCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G~--~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.+|+++ |. ++. ++.+++|++.++..++.++. .+||+|++++-.++.+...++ ..|++++.++.
T Consensus 73 lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~---~~gd~Vl~~~P~y~~~~~~~~----~~g~~v~~v~~ 145 (405)
T PRK09148 73 LRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAIT---APGDVILCPNPSYPIHAFGFI----MAGGVIRSVPA 145 (405)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhc---CCCCEEEEcCCCCcccHHHHH----hcCCEEEEEeC
Confidence 344555554 54 455 78899999988877766663 379999999999998776654 35888887764
Q ss_pred h-------hhhc-c---CCCEeEEEEEcC-CCCeeeccH---HHHHHHHHhCCcEEEEEecccc-c--c--CCCCCC---
Q 001769 289 K-------DIDY-K---SGDVCGVLVQYP-GTEGEVLDY---GDFIKNAHANGVKVVMATDLLA-L--T--ILKPPG--- 345 (1016)
Q Consensus 289 ~-------~L~~-l---~~~t~~V~v~~p-n~~G~i~dl---~eI~~lah~~GalviV~a~~~a-l--g--~l~~pg--- 345 (1016)
+ ++++ + .+++++|++.+| |.+|.+.+. ++|+++|+++|++++++ +... + . ...+..
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~D-e~Y~~~~~~~~~~~s~~~~~ 224 (405)
T PRK09148 146 EPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSD-LAYSEIYFDGNPPPSVLQVP 224 (405)
T ss_pred CCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEe-ccchhhhcCCCCCCChhhCC
Confidence 2 2333 2 357889999998 689999875 68899999999999984 2221 1 0 001111
Q ss_pred -cccceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchh
Q 001769 346 -ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 346 -~~GaDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~ 423 (1016)
..+..|+++|. |.|+.| |=-.||+.+.+++++.+- +-+...+.|.+
T Consensus 225 ~~~~~~i~~~SfSK~~~~p----GlR~G~~v~~~~~i~~l~----------------------------~~~~~~~~~~~ 272 (405)
T PRK09148 225 GAKDVTVEFTSMSKTFSMA----GWRMGFAVGNERLIAALT----------------------------RVKSYLDYGAF 272 (405)
T ss_pred CccCcEEEEeccccccCCc----chheeeeeCCHHHHHHHH----------------------------HHHHHhccCCC
Confidence 12234567886 877644 112689888777665541 00011111211
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC------HHHHHHHHH-H
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD------AHAIASAAY-K 494 (1016)
Q Consensus 424 ~~l~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~------~~~v~~~L~-~ 494 (1016)
......++.+ +. ...+-++++.+++.++.+++.+.|++.| +.+..+ .+| +-++.+. ..++.+.|. +
T Consensus 273 ~~~q~~~~~~-L~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~f--~~~~l~~~~~~~~~~~~~~~ll~~ 347 (405)
T PRK09148 273 TPIQVAATAA-LN-GPQDCIAEMRELYKKRRDVLVESFGRAG-WDIPPPAASMF--AWAPIPEAFRHLGSLEFSKLLVEK 347 (405)
T ss_pred hHHHHHHHHH-Hh-CcHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCCeeEE--EEEECCCccCCCCHHHHHHHHHHh
Confidence 1111111111 11 1233356677778888889999999887 654321 122 2233331 467877765 6
Q ss_pred cCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 495 IEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 495 ~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
+||.+.+. .++.+|+++. .+.+++.+.++.|.
T Consensus 348 ~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~ 385 (405)
T PRK09148 348 ADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIK 385 (405)
T ss_pred CCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 89987542 2478999997 46777777666664
No 490
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.18 E-value=1.1e-08 Score=120.53 Aligned_cols=251 Identities=17% Similarity=0.174 Sum_probs=149.6
Q ss_pred ccccccccCCCChhhhhcccccccccccCCCCCchhhhhHHHHHHHHHHHHHHHh----CCC-ceeeecCChHHHHHHHH
Q 001769 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT----GFD-SFSLQPNAGAAGEYAGL 665 (1016)
Q Consensus 591 ~i~LGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~qG~~e~~~el~~~laeL~----G~~-~~~l~~~sGa~ae~a~l 665 (1016)
...||+|.+++..+...+.... .+.+...+.. +...++.+.|++++ +++ .+.+..+||++++++++
T Consensus 50 ~~~lGh~~p~v~~ai~~ql~~~-~~~~~~~~~~--------~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Al 120 (425)
T PRK09264 50 ALNYGHNNPVLKQALIDYLQRD-GITHGLDMHT--------TAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAAL 120 (425)
T ss_pred hccCCCCCHHHHHHHHHHHHhc-ccccccccCc--------HHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHH
Confidence 3568998877777666654322 1111101111 22346777788775 243 23344589999999999
Q ss_pred HHHHHHHHhcCCCCCCEEE-EcCCCccccHHHHHh---------CCc---EEEEEcCCCCC---CCCHHHHHHHHHcCC-
Q 001769 666 MVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM---------CGM---KIVSVGTDAKG---NINIEELRKAAEANR- 728 (1016)
Q Consensus 666 ~air~~~~~~g~~~~~~Vl-v~~saHg~~~~~a~~---------~G~---~vv~v~~d~~g---~iD~~~L~~~i~~~~- 728 (1016)
+.+|.| . .|.+|| ...+.||....+... +|. .++.+|..... .-|++++++.+++++
T Consensus 121 klAr~~---t---gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 121 KLARKV---T---GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHh---c---CCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 999987 2 234454 467889976543322 121 35566653210 137888999996432
Q ss_pred --CCEEEEEEEcC-CCCcccc---ccHHHHHHHHHHcCcEEEEEccccccccCcCCCC--------ccCCcEEEeCcccc
Q 001769 729 --DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKT 794 (1016)
Q Consensus 729 --~~t~~v~i~~P-n~~G~i~---~di~~I~~ia~~~g~lv~vDga~~~a~~~l~~pg--------~~GaDi~~~s~hK~ 794 (1016)
+++++|+++.. +..|++. ..+++|.++|++||+++|+|.+++ ++.+.| ...+|+++++ |.
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t----G~GrtG~~~~~~~~~v~PDi~t~~--K~ 268 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA----GCGRTGTFFSFERAGITPDIVTLS--KS 268 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh----CCccccHHHHHhhcCCCCCEEEec--cc
Confidence 46889998863 4556543 268999999999999999998774 222222 2347888763 87
Q ss_pred ccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHH-HHhChhhHHHHHH
Q 001769 795 FCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI-AMMGSKGLTEASK 873 (1016)
Q Consensus 795 ~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l-~~lG~eGl~~~~~ 873 (1016)
++ +||--+|++++++++..+.++. ..+++.|++..++++.+.| ..+..+. +.+
T Consensus 269 l~----~~G~pigav~~~~~i~~~~~~~-------------------~~~T~~gnp~~~aaa~a~l~~~~~~~~---l~~ 322 (425)
T PRK09264 269 IS----GYGLPMALVLIKPELDVWKPGE-------------------HNGTFRGNNLAFVTATAALEEYWSDDA---FEK 322 (425)
T ss_pred cC----CCccceEEEEEchhhhccCCCc-------------------cCCCCCCCHHHHHHHHHHHHHHHhhhH---HHH
Confidence 74 3232368888887653221110 0112445555566666666 4444333 455
Q ss_pred HHHHHHHHHHHHHhc
Q 001769 874 IAILNANYMAKRLEK 888 (1016)
Q Consensus 874 ~~~~nA~yla~~L~~ 888 (1016)
+...+..++.++|++
T Consensus 323 ~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 323 EVKAKGELVRERLEE 337 (425)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666677888887765
No 491
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.18 E-value=5.7e-09 Score=121.48 Aligned_cols=276 Identities=14% Similarity=0.092 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHcCCCCccEEEccchHHHHHHHHHHhc-cccC----CCCEEEEcCC-CCHHHHHHHHHhhc-----C--
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKG----KKKTFIIASN-CHPQTIDICITRAD-----G-- 278 (1016)
Q Consensus 212 ~i~e~q~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~-~~~~----~gd~Vlvs~~-~Hps~~~~l~~~a~-----~-- 278 (1016)
...++.+.++++++.+ ++.++++|+.++++++.+.+ +... .+++||+.+. -|..+...+..-.. .
T Consensus 74 ~~~~la~~l~~~~~~~--~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 151 (389)
T PRK01278 74 EQERLAERLVENSFAD--KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFG 151 (389)
T ss_pred HHHHHHHHHHhhCCCC--EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCC
Confidence 3446778899988655 58889999999998766543 2111 2347777664 55444444321000 0
Q ss_pred ---CCeE-EEEeCchhhhc-cCCCEeEEEEEcC-CCCeeec----cHHHHHHHHHhCCcEEEEEecccc-ccCCCC--C-
Q 001769 279 ---FDIK-VVVSDLKDIDY-KSGDVCGVLVQYP-GTEGEVL----DYGDFIKNAHANGVKVVMATDLLA-LTILKP--P- 344 (1016)
Q Consensus 279 ---~gi~-v~~vd~~~L~~-l~~~t~~V~v~~p-n~~G~i~----dl~eI~~lah~~GalviV~a~~~a-lg~l~~--p- 344 (1016)
.++. +.+.|++++++ +++++++|++..+ +..|.+. ++++|.++|+++|++++++ +..+ ++-... +
T Consensus 152 ~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~D-Ev~~g~g~~g~~~~~ 230 (389)
T PRK01278 152 PLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFD-EVQCGMGRTGKLFAH 230 (389)
T ss_pred CCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-ccccCCCcCCcceee
Confidence 0111 12245567777 7778999988754 4556333 7999999999999999983 3332 221111 0
Q ss_pred Cccc--ceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 345 GELG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 345 g~~G--aDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
..+| .|+++. +|.|+ ||--.|++.+++++.+.+... .. .+.++.
T Consensus 231 ~~~~~~pdi~t~-sK~l~-----~G~~ig~~~~~~~~~~~~~~~----------~~------------------~~t~~~ 276 (389)
T PRK01278 231 EWAGVTPDIMAV-AKGIG-----GGFPLGACLATEEAAKGMTPG----------TH------------------GSTYGG 276 (389)
T ss_pred cccCCCCCEEEE-ehhcc-----CCcceEEEEEcHHHHhccCCC----------CC------------------CCCCCc
Confidence 1223 355432 48775 232356777787776655210 00 011122
Q ss_pred hhHHHHHHHHH-HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC-CeE-EcCC--CCccEEEEecCC-HHHHHHHHHHcC
Q 001769 423 AQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVE-VQGL--PFFDTVKVKCAD-AHAIASAAYKIE 496 (1016)
Q Consensus 423 ~~~l~a~~Aa~-y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G-~~~-l~~~--~~~~~v~i~~~~-~~~v~~~L~~~G 496 (1016)
+ ++ +..|+. .+..+..+ ++.+++.++.++++++|+++. ... ++.. +.---+.+.+.. +.++.+.|.++|
T Consensus 277 ~-~~-~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~l~~~G 351 (389)
T PRK01278 277 N-PL-AMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVPNRDLVQALRDEG 351 (389)
T ss_pred c-HH-HHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecCHHHHHHHHHHCC
Confidence 2 22 112221 12333222 234556666777777776541 011 1110 100012223333 778999999999
Q ss_pred ceeecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 497 I~~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
|.+.+...+.+|++++..++++||+++++.|..
T Consensus 352 V~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~ 384 (389)
T PRK01278 352 LLTVGAGDNVVRLLPPLIITEEEIDEALERLER 384 (389)
T ss_pred eEEeecCCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 988665567899999988999999999999853
No 492
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.18 E-value=3.1e-09 Score=124.02 Aligned_cols=268 Identities=13% Similarity=0.167 Sum_probs=155.5
Q ss_pred HHHHHHHHcCCCCccEEEccchHHHHHHHHH-Hhcccc---CCCCEEE-EcCCCCHHHHHHHHHhhcCCC---------e
Q 001769 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQK---GKKKTFI-IASNCHPQTIDICITRADGFD---------I 281 (1016)
Q Consensus 216 ~q~~iA~L~G~~~anasl~~~~Taa~eA~~~-a~~~~~---~~gd~Vl-vs~~~Hps~~~~l~~~a~~~g---------i 281 (1016)
+-+.+++..+++ .+.++++|+.++|+++. ++.+++ ..+++|| .....|.++...+.. ..... .
T Consensus 83 la~~l~~~~~~~--~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~ 159 (395)
T PRK03715 83 LAGLLTQHSCFD--KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSA-SGKPGWDTIFAPQVP 159 (395)
T ss_pred HHHHHhhccCCC--EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhh-cCCcccccCCCCCCC
Confidence 345555555554 47888999999998664 433321 1234554 566899988877642 11100 0
Q ss_pred EEE---EeCchhhhc-cCCCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEeccccccCCCCCCc------
Q 001769 282 KVV---VSDLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLALTILKPPGE------ 346 (1016)
Q Consensus 282 ~v~---~vd~~~L~~-l~~~t~~V~v~~p-n~~G~i~d----l~eI~~lah~~GalviV~a~~~alg~l~~pg~------ 346 (1016)
.+. +.+++++++ +.+++++|++... +..|.+.+ +++|.++|+++|++++++ +.++ | +..-|.
T Consensus 160 ~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~D-Ev~t-G-~GRtG~~~a~~~ 236 (395)
T PRK03715 160 GFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVD-EVQT-G-CGRTGTLFAYEL 236 (395)
T ss_pred CceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-cccc-C-CCCCcchhhHhh
Confidence 112 234456666 6677888887754 46677776 999999999999999983 4333 2 222332
Q ss_pred cc--ceEEEecCccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhh
Q 001769 347 LG--ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1016)
Q Consensus 347 ~G--aDivvgs~k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~ 424 (1016)
+| .||++. +|.+++ |-|.+++ .+++++....++. ..+|- .. .
T Consensus 237 ~gv~PDi~t~-gK~lg~----G~p~~av-~~~~~i~~~~~~~---------------------------~~~T~--~g-~ 280 (395)
T PRK03715 237 SGIEPDIMTL-GKGIGG----GVPLAAL-LAKAEVAVFEAGD---------------------------QGGTY--NG-N 280 (395)
T ss_pred cCCCCceeee-hhhhhC----CcceEEE-EEccccccccCCC---------------------------cCCCC--CC-C
Confidence 23 487655 598863 3465554 5666653221110 00111 11 1
Q ss_pred HHHHHHHHH-HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC---CeE-EcCCCCccEEEEecCCHHHHHHHHHHc---C
Q 001769 425 ALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG---TVE-VQGLPFFDTVKVKCADAHAIASAAYKI---E 496 (1016)
Q Consensus 425 ~l~a~~Aa~-y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G---~~~-l~~~~~~~~v~i~~~~~~~v~~~L~~~---G 496 (1016)
++ +.+++. -+..+..+ ++.+++.++.++|+++|+++. ++. +.+...+-.+.+..+.+..+.+.+.+. |
T Consensus 281 pl-~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~Glm~~i~l~~~~~~~~~~~~~~~~~~G 356 (395)
T PRK03715 281 PL-MTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGERGEGLLRALLLGKDIGPQIVEKARDMQPDG 356 (395)
T ss_pred HH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEEcceeEEEEEecCchHHHHHHHHHhccCCC
Confidence 22 111211 12444333 457788888999999988651 022 111111112333222144555555555 9
Q ss_pred ceeecccCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001769 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 497 I~~~~~~~~~lris~te~~t~edid~ll~aL~~ 529 (1016)
|.+....++.||+++...+|++||++++++|..
T Consensus 357 i~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~ 389 (395)
T PRK03715 357 LLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRS 389 (395)
T ss_pred EEEeecCCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 998765568899999999999999999999964
No 493
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.18 E-value=5.1e-10 Score=128.52 Aligned_cols=224 Identities=15% Similarity=0.145 Sum_probs=144.3
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCccccHHHHHhCCcEEEEEcCCCCC
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~-~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~g 713 (1016)
.++++++++.+|++..++..+.|++ ++..++++.+. .++ +.|+++.+.|+.+...++..|++++.++.++++
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~--e~i~~~~~~~~-----~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~ 132 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGAD--EGIELLIRAFC-----EPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNW 132 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHH--HHHHHHHHHhc-----CCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCC
Confidence 3678889999999877776777754 24445555442 233 789999888877777888999999999998888
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcCC-CCccccccHHHHHHHHHH--cCcEEEEEccccccccCcCCC----CccCCcE
Q 001769 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSP----GYIGADV 786 (1016)
Q Consensus 714 ~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~di~~I~~ia~~--~g~lv~vDga~~~a~~~l~~p----g~~GaDi 786 (1016)
.+|++++++++ +++++|++++|| .+|.+. +.+++.++++. .++++++|.+..- +...... ...+-=+
T Consensus 133 ~~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~~n~i 206 (351)
T PRK01688 133 QLDLPAIADNL----DGVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYPHLV 206 (351)
T ss_pred CCCHHHHHHhc----cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhCCCEE
Confidence 99999999887 368899999995 689987 66666666543 2688999987521 1110010 1111125
Q ss_pred EEeCccccccCCCCCCCCeEEEEEEcccccccCCCCccccCCCCCCCCcCCCCCCccCCccchhhHHHHHHHHHHHhChh
Q 001769 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1016)
Q Consensus 787 ~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~lpg~~~g~~g~~~~re~~~~~g~i~s~~~G~a~~~~~a~a~l~~lG~e 866 (1016)
++.|++|+|++| |.++|++++++++.+.+.... ...+++ .....++.++|..-+.+
T Consensus 207 v~rSfSK~~gla----GlRiGy~i~~~~~i~~l~~~~--------------~~~~v~------~~~~~~a~~~L~~~~~~ 262 (351)
T PRK01688 207 ILRTLSKAFALA----GLRCGFTLANEEVINLLLKVI--------------APYPLS------TPVADIAAQALSPQGIA 262 (351)
T ss_pred EEecchHhhcCH----HHHHhHHhCCHHHHHHHHhcc--------------CCCCCC------HHHHHHHHHHHhcchHH
Confidence 667999998543 456799998877665442110 001111 11222233444332333
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCcccc
Q 001769 867 GLTEASKIAILNANYMAKRLEKH--YPILFR 895 (1016)
Q Consensus 867 Gl~~~~~~~~~nA~yla~~L~~~--~~v~y~ 895 (1016)
-+++..+....+.+++.+.|++. ++..+|
T Consensus 263 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p 293 (351)
T PRK01688 263 AMRERVAEINANRQWLIAALKEIPCVEQVFD 293 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeECC
Confidence 45566666677788999999863 333454
No 494
>PLN02368 alanine transaminase
Probab=99.18 E-value=1.8e-09 Score=126.30 Aligned_cols=182 Identities=14% Similarity=0.185 Sum_probs=124.7
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC--ceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEE
Q 001769 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1016)
Q Consensus 627 ~qG~~e~~~el~~~laeL~G~~--~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~v 704 (1016)
++|..++...+.+++.+..|.+ ...+..+.|++. +..++++.+.. .+++.|+++++.+..+...+...|.++
T Consensus 106 ~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~--al~~~~~~l~~----~pGd~Vli~~P~Y~~y~~~~~~~g~~~ 179 (407)
T PLN02368 106 SRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASK--GVMQILNAVIR----GEKDGVLVPVPQYPLYSATISLLGGTL 179 (407)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHH--HHHHHHHHHcC----CCCCEEEEeCCCCccHHHHHHHcCCEE
Confidence 5677777777777777766754 335666666541 22333333211 257899999998888888889999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcC---CCCEEEEEEEcC-CCCcccc--ccHHHHHHHHHHcCcEEEEEccccc-cccC
Q 001769 705 VSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG 775 (1016)
Q Consensus 705 v~v~~d~~--g~iD~~~L~~~i~~~---~~~t~~v~i~~P-n~~G~i~--~di~~I~~ia~~~g~lv~vDga~~~-a~~~ 775 (1016)
+.++++++ +.+|+++|+++++.. ..+|++|++.+| |.+|.+. +.+++|+++|+++|++++.|-+... ...+
T Consensus 180 v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~ 259 (407)
T PLN02368 180 VPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQD 259 (407)
T ss_pred EEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence 99998753 579999999999721 127999999999 4688886 4678889999999999999976421 1111
Q ss_pred ---cCCCC----ccC-------CcEEEeCccccc-cCCCCCCCCeEEEEEE---ccccccc
Q 001769 776 ---LTSPG----YIG-------ADVCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPF 818 (1016)
Q Consensus 776 ---l~~pg----~~G-------aDi~~~s~hK~~-~~phg~GGPg~G~i~~---~~~l~~~ 818 (1016)
..+.. +++ -=|++.|++|+| ++| |..+|++++ ++++.+.
T Consensus 260 ~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~----GlRiGy~i~~~~~~~li~~ 316 (407)
T PLN02368 260 ERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGEC----GQRGGYFEMTNIPPKTVEE 316 (407)
T ss_pred CCCcccHHHHHhhhcccccccceEEEEecCCcccccCC----ccceEEEEEeCCCHHHHHH
Confidence 00100 111 115667999998 666 688999985 5554443
No 495
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.18 E-value=2e-10 Score=132.10 Aligned_cols=282 Identities=17% Similarity=0.142 Sum_probs=152.1
Q ss_pred HHHHHHHHcCCC----CccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCH---HHHHHHHH---hhcCCCeEEEE
Q 001769 216 FQTMIADLTGLP----MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHP---QTIDICIT---RADGFDIKVVV 285 (1016)
Q Consensus 216 ~q~~iA~L~G~~----~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hp---s~~~~l~~---~a~~~gi~v~~ 285 (1016)
.++.+.+|+|++ .+|+-.. +|+.|+.++.+|+. ++||+|+.-+..|. +.-..... -+....++++.
T Consensus 71 a~~ra~~lF~~~~~~w~anvqp~-SGs~An~av~~aLl---~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~ 146 (399)
T PF00464_consen 71 AIERAKELFGAEPKEWYANVQPH-SGSQANLAVYMALL---KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVP 146 (399)
T ss_dssp HHHHHHHHHT-STTTEEEE---S-SHHHHHHHHHHHHT----TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEE
T ss_pred HHHHHHHHhCCCcccceEEeecC-CchHHHHHHHHHHH---hhcCcEEecChhhcccccccccccccccccccceEEEEe
Confidence 457889999999 6666555 55667788888874 38999997775542 11111000 00011223333
Q ss_pred ---------eCchhhhc-c-CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE-eccc---cccCCCCCCcccce
Q 001769 286 ---------SDLKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLL---ALTILKPPGELGAD 350 (1016)
Q Consensus 286 ---------vd~~~L~~-l-~~~t~~V~v~~pn~~G~i~dl~eI~~lah~~GalviV~-a~~~---alg~l~~pg~~GaD 350 (1016)
+|.+++++ + .-+.++|++-.+++ -...|++++.++|++.|++++++ ++.. +-|++.+|-++ ||
T Consensus 147 y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y-~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-AD 224 (399)
T PF00464_consen 147 YPVDPDTGLIDYDELEKLAKEHKPKLIICGASSY-PRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-AD 224 (399)
T ss_dssp EEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SST-SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SS
T ss_pred eeeecCCCeECHHHHHHHHhhcCCCEEEECchhc-cCccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ce
Confidence 33344554 2 23566777765543 34468999999999999999994 4443 33567778776 99
Q ss_pred EEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccc--cccCCccchhhHHH
Q 001769 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR--DKATSNICTAQALL 427 (1016)
Q Consensus 351 ivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRR--ekaTsnicT~~~l~ 427 (1016)
|+.+|+ |+|. ||..|++.+++.... .|..++. -.-.+ .+.|.+ ..+..--+-...+.
T Consensus 225 vvt~sThKtl~------GPrggiI~~~~~~~~----------~~~~~~~-~~~~l---~~~I~~avfP~~qg~~h~~~ia 284 (399)
T PF00464_consen 225 VVTGSTHKTLR------GPRGGIILTNKGSKN----------VDKKGKE-IDEEL---AEKIDSAVFPGLQGGPHMHRIA 284 (399)
T ss_dssp EEEEESSGGG-------SSS-EEEEES-SEEE----------E-TTS-E-EEHHH---HHHHHHHHTTTT-SS--HHHHH
T ss_pred EEEeecccccc------ccCceEEEEcCCccc----------cCCcccc-cHHHH---HHHhccccCCCcccCcchhHHH
Confidence 999999 8785 566689999832211 0111110 00000 000000 00110001112333
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-CCCccEEEEecC--C--HHHHHHHHHHcCceeec-
Q 001769 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA--D--AHAIASAAYKIEMNLRV- 501 (1016)
Q Consensus 428 a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~-~~~~~~v~i~~~--~--~~~v~~~L~~~GI~~~~- 501 (1016)
+++.++ ...+ ....++-++++.+||+.|++.|.+.| ++++. ...-+.|.+++. + +.++.++|.+.||.+..
T Consensus 285 alAval-~ea~-~~~fk~Ya~qVv~NAk~La~~L~~~G-~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn 361 (399)
T PF00464_consen 285 ALAVAL-KEAL-SPEFKEYAKQVVKNAKALAEALQERG-FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKN 361 (399)
T ss_dssp HHHHHH-HHHT-SHHHHHHHHHHHHHHHHHHHHHHHTT--EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE
T ss_pred HHHHHH-hccc-CHHHHHHHHHHHHHHHHHHHHHhhCC-cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeeccc
Confidence 333333 2222 33458999999999999999999998 99984 233445677663 2 67888999999997743
Q ss_pred -c-------cCCeEEEEeccCC----CHHHHHHHHHH
Q 001769 502 -V-------DSNTVTASFDETT----TLEDVDKLFIV 526 (1016)
Q Consensus 502 -~-------~~~~lris~te~~----t~edid~ll~a 526 (1016)
+ .++.||+...+.+ .++|+.++.+.
T Consensus 362 ~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 362 TIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp --TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred ccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 1 2467999988754 35666665543
No 496
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.18 E-value=3.2e-09 Score=121.31 Aligned_cols=218 Identities=20% Similarity=0.269 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHhCC-CceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCccccHHHHHhC----------
Q 001769 633 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMC---------- 700 (1016)
Q Consensus 633 ~~~el~~~laeL~G~-~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv-~~saHg~~~~~a~~~---------- 700 (1016)
..-++.++++++++. +.+ -+.|||++++++++..+|+| ++|++|+. ....||.+.......
T Consensus 94 ~Ei~~Aell~~~~p~~e~v-rfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p 166 (432)
T COG0001 94 LEVELAELLIERVPSIEKV-RFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSP 166 (432)
T ss_pred HHHHHHHHHHHhcCcccEE-EEecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCC
Confidence 344778899999887 544 44789999888888888877 45676665 667888776654321
Q ss_pred ---Cc------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc-CCCCccccc---cHHHHHHHHHHcCcEEEEEc
Q 001769 701 ---GM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY-PSTHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (1016)
Q Consensus 701 ---G~------~vv~v~~d~~g~iD~~~L~~~i~~~~~~t~~v~i~~-Pn~~G~i~~---di~~I~~ia~~~g~lv~vDg 767 (1016)
|+ .+..+|+ .|++.+++++++.++++++|+++- ..+.|++.+ -++++.++|+++|+++|+|-
T Consensus 167 ~s~Gvp~~~a~~ti~~~y-----ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 167 SSPGVPADVAKHTLVLPY-----NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred CCCCCChhhhccEEEecC-----CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 22 3556666 599999999998778999999986 467788762 47889999999999999996
Q ss_pred ccc---ccccCcCCCCccCCcEEEeCccccccCCCCCCCCeEEEEEEcccccccC-CCCccccCCCCCCCCcCCCCCCcc
Q 001769 768 ANM---NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIA 843 (1016)
Q Consensus 768 a~~---~a~~~l~~pg~~GaDi~~~s~hK~~~~phg~GGPg~G~i~~~~~l~~~l-pg~~~g~~g~~~~re~~~~~g~i~ 843 (1016)
+-+ .+++|.+.--..-+|+.++ -|.+ |||-| +|.+..++++++++ |...+.+ .
T Consensus 242 ViTGFR~~~gGaq~~~gi~PDlttl--GKiI----GGGlP-~ga~gGr~eiM~~~~p~g~vyq----------------a 298 (432)
T COG0001 242 VITGFRVALGGAQGYYGVEPDLTTL--GKII----GGGLP-IGAFGGRAEIMEQLAPLGPVYQ----------------A 298 (432)
T ss_pred chhhcccCCcccccccCcCcchhhh--hhhh----cCCcc-eeeeccHHHHHhhhCCCCCccc----------------c
Confidence 543 1222322222234788755 3666 44444 78899999888754 3222211 1
Q ss_pred CCccchhhHHHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhc
Q 001769 844 AAPWGSALILPISYTYIAMMGS-KGLTEASKIAILNANYMAKRLEK 888 (1016)
Q Consensus 844 s~~~G~a~~~~~a~a~l~~lG~-eGl~~~~~~~~~nA~yla~~L~~ 888 (1016)
+++.|+++.+++..+.|..+-. ++ ..++....+..|++.|++
T Consensus 299 GT~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 299 GTLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRA 341 (432)
T ss_pred CCCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHH
Confidence 2356678888888888887755 34 234455566667766664
No 497
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.18 E-value=1.8e-09 Score=124.25 Aligned_cols=160 Identities=14% Similarity=0.178 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhCCCceeeecCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCccccHHHHHhCCcEEEEEcCCCC-C
Q 001769 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-G 713 (1016)
Q Consensus 635 ~el~~~laeL~G~~~~~l~~~sGa~ae~a~l~air~~~~~~g~~~~~~Vlv~~saHg~~~~~a~~~G~~vv~v~~d~~-g 713 (1016)
.++++.+++.+|.+...+..+.|++. +..++++.+ .+++ ++++.+.+..+...+++.|.+++.++.+++ +
T Consensus 58 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~l------~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (356)
T PRK08056 58 RHLHQALARHHQVPASWILAGNGETE--SIFAVVSGL------KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADG 128 (356)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHHHh------CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccC
Confidence 47778888889988666666666542 333444432 1344 555555444455567899999999998753 3
Q ss_pred -CCCHHHHHHHHHcCCCCEEEEEEEcCC-CCcccccc---HHHHHHHHHHcCcEEEEEccccc-cccC--cCCC-CccCC
Q 001769 714 -NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMN-AQVG--LTSP-GYIGA 784 (1016)
Q Consensus 714 -~iD~~~L~~~i~~~~~~t~~v~i~~Pn-~~G~i~~d---i~~I~~ia~~~g~lv~vDga~~~-a~~~--l~~p-g~~Ga 784 (1016)
.+| +++.+.++ +++++|++++|+ .+|.+. + +++|+++|+++|+++++|.+..- ...+ ...+ ....-
T Consensus 129 ~~~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 129 WQLT-DAILEALT---PDLDCLFLCTPNNPTGLLP-ERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred CCcc-HHHHHhcc---CCCCEEEEeCCcCCCCCCC-CHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 444 45656665 789999999995 688876 5 88899999999999999987421 1000 0011 12345
Q ss_pred cEEEeCccccccCCCCCCCCeEEEEEEc
Q 001769 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1016)
Q Consensus 785 Di~~~s~hK~~~~phg~GGPg~G~i~~~ 812 (1016)
++++.|++|+|++| |..+|++++.
T Consensus 204 ~i~~~S~SK~~~~~----G~RiG~~v~~ 227 (356)
T PRK08056 204 LWVLRSLTKFYAIP----GLRLGYLVNS 227 (356)
T ss_pred EEEEEechhhccCc----chhheeeecC
Confidence 68889999999765 5779999875
No 498
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.18 E-value=1.1e-08 Score=118.98 Aligned_cols=265 Identities=11% Similarity=0.074 Sum_probs=164.5
Q ss_pred HHHHHHHHc----C--CCCc-cEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001769 216 FQTMIADLT----G--LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1016)
Q Consensus 216 ~q~~iA~L~----G--~~~a-nasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~ 288 (1016)
+++.+|+.+ | .++. ++.+++|++.++..++.++. .+||+|++++-.++.+...++ ..|.+++.+++
T Consensus 73 lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~---~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~ 145 (388)
T PRK07366 73 FREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL---NPGDFALLLDPGYPSHAGGVY----LAGGQIYPMPL 145 (388)
T ss_pred HHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC---CCCCEEEEcCCCCcchHHHHH----hcCCEEEEEEC
Confidence 455666655 5 4555 58788888877776665543 379999999999988877754 35888777655
Q ss_pred h----------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c---cC--CCCCCc-
Q 001769 289 K----------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L---TI--LKPPGE- 346 (1016)
Q Consensus 289 ~----------~L~~-l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-l---g~--l~~pg~- 346 (1016)
+ ++++ +.++++++++.+| |.+|.+.+ +++|+++|+++|++++++ ++.. + +. ..+...
T Consensus 146 ~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D-e~Y~~~~~~~~~~~~~~~~~ 224 (388)
T PRK07366 146 RAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHD-FPYVDLVFDGEVEPPSILQA 224 (388)
T ss_pred CCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEe-cchhhcccCCCCCCCChhhC
Confidence 2 2222 3457888999888 78998865 677888999999988884 3221 1 10 000111
Q ss_pred --cc-ceEEEecC-ccccccCCCCCcceEEEEeehhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccch
Q 001769 347 --LG-ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1016)
Q Consensus 347 --~G-aDivvgs~-k~lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT 422 (1016)
.+ .-|+++|. |.||.| |=-.|++...+++++.+- +-+...++++
T Consensus 225 ~~~~~~vi~~~SfSK~~g~~----GlRiG~~v~~~~li~~l~----------------------------~~~~~~~~~~ 272 (388)
T PRK07366 225 DPEKSVSIEFFTLSKSYNMG----GFRIGFAIGNAQLIQALR----------------------------QVKAVVDFNQ 272 (388)
T ss_pred CCCcccEEEEeecccccCCc----chhheehcCCHHHHHHHH----------------------------HHHhhcccCC
Confidence 11 23567776 888654 223588887777665541 1111223333
Q ss_pred hhHH-HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecCC-----HHHHHHHH-H
Q 001769 423 AQAL-LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-----AHAIASAA-Y 493 (1016)
Q Consensus 423 ~~~l-~a~~Aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~~-----~~~v~~~L-~ 493 (1016)
.+.+ .+.++++ . ...+-++++.++..++.+++.+.|+++| +....+ ..| +-++++. ..++.+.| .
T Consensus 273 ~~~~~~~a~~~l-~--~~~~~l~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~l~~ 346 (388)
T PRK07366 273 YRGILNGAIAAL-T--GPQATVQQTVQIFRQRRDAFINALHQIG-WPVPLPEATMY--VWAKLPEPWQGNSVEFCTQLVA 346 (388)
T ss_pred CHHHHHHHHHHH-h--CcHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeEE--EEEECCcccCCCHHHHHHHHHH
Confidence 2222 2222221 1 1234467778888888889999999886 654321 122 2234331 56777777 4
Q ss_pred HcCceeecc------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 494 KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 494 ~~GI~~~~~------~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
++||.+.+. ..+.+|+++.. +.+++++.++.|+
T Consensus 347 ~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~ 385 (388)
T PRK07366 347 QTGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIA 385 (388)
T ss_pred hCCEEEeCchHhCcCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 679987542 14789999973 6888888888775
No 499
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.17 E-value=1.3e-08 Score=123.15 Aligned_cols=322 Identities=11% Similarity=0.146 Sum_probs=179.1
Q ss_pred HHHHHHHHhcCCCccccccCCC---CCCCCChHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHHc-----
Q 001769 153 MIEHMQKLASMNKVYKSFIGMG---YYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLT----- 224 (1016)
Q Consensus 153 ~~~~l~~la~~n~~~~~~lG~g---~y~~~~p~~i~~~i~~~~~~~t~ytPyq~e~sqG~le~i~e~q~~iA~L~----- 224 (1016)
+....+++...+....+ ++.| .++...|..+.+.+.+.-.....|++ ++| +.++++.||+.+
T Consensus 134 ~~~~~~~~~~~g~~~i~-l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~-----~~G----~~~lReaia~~~~~~~~ 203 (517)
T PRK13355 134 VVDEANRMEAAGTHILK-LNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSD-----SKG----LFSARKAIMQYAQLKGL 203 (517)
T ss_pred HHHHHHHHHHcCCCeEE-ecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCC-----CcC----hHHHHHHHHHHHHhcCC
Confidence 44555555444443222 2333 23334577666565543222334654 244 334566777777
Q ss_pred -CCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----------hhhhc
Q 001769 225 -GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----------KDIDY 293 (1016)
Q Consensus 225 -G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~vd~----------~~L~~ 293 (1016)
+.++.++.+++|++.++..++.++. ++||+|+++.-.|+.+...++ ..|.+++.+++ +++++
T Consensus 204 ~~~~~~~I~it~G~~eal~~~~~~l~---~~Gd~Vli~~P~y~~y~~~~~----~~g~~~v~~~~~~~~~~~~d~~~l~~ 276 (517)
T PRK13355 204 PNVDVDDIYTGNGVSELINLSMSALL---DDGDEVLIPSPDYPLWTACVN----LAGGTAVHYRCDEQSEWYPDIDDIRS 276 (517)
T ss_pred CCCChhHEEEeCcHHHHHHHHHHHhC---CCCCEEEEcCCCCcCHHHHHH----HCCCEEEEeecCcccCCCCCHHHHHH
Confidence 5677889999999977766665552 379999999999998887654 34777666533 34555
Q ss_pred -cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c---cC-CCCCCcccceE--E-EecC-ccc
Q 001769 294 -KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L---TI-LKPPGELGADI--V-VGSA-QRF 359 (1016)
Q Consensus 294 -l~~~t~~V~v~~p-n~~G~i~d---l~eI~~lah~~GalviV~a~~~a-l---g~-l~~pg~~GaDi--v-vgs~-k~l 359 (1016)
+++++++|++.+| |.+|.+.+ +++|+++|+++|+++++| +... + +. ..+...+.-|+ + ++|. |.|
T Consensus 277 ~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~D-E~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~ 355 (517)
T PRK13355 277 KITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSD-EIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSH 355 (517)
T ss_pred hcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEe-hhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhc
Confidence 6788999999999 68999876 899999999999999984 3221 1 10 01111222232 2 3554 877
Q ss_pred cccCCCCCcceEEEEee--hhhhhcCCCceEeeeecCCCCcceeeecccccccccccccCCccchhhHHHHHHHHHHHHH
Q 001769 360 GVPMGYGGPHAAFLATS--QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1016)
Q Consensus 360 g~P~g~GGP~~Gfl~~~--~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~~~ 437 (1016)
+.| |--.||+++. +++.+.+- + .++. ......|.+.. +..++.. .+
T Consensus 356 ~~~----G~RiG~~i~~~~~~~~~~~~--------~----------------~l~~-~~~~~~~~~~~--~q~a~~~-aL 403 (517)
T PRK13355 356 MIA----GYRIGWMILSGNKRIAKDYI--------E----------------GLNM-LANMRLCSNVP--AQSIVQT-AL 403 (517)
T ss_pred cCc----ccceEEEEeeCchhhHHHHH--------H----------------HHHH-HhcCcCCcChH--HHHHHHH-Hh
Confidence 543 3346887753 22211110 0 0000 00111222221 1112111 11
Q ss_pred hCcccHHHH---HHHHHHHHHHHHHHHhcCCCeEEcCC--CCccEEEEecC-------CHHH-HHHHHHHcCceeecc--
Q 001769 438 HGPEGLKTI---AQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCA-------DAHA-IASAAYKIEMNLRVV-- 502 (1016)
Q Consensus 438 ~g~~Gl~~i---a~~~~~~a~~L~~~L~~~G~~~l~~~--~~~~~v~i~~~-------~~~~-v~~~L~~~GI~~~~~-- 502 (1016)
-+.+.+++. .++..+..+++.+.|++++|+++..+ .++ +-++++ ...+ +.+.|.++||.+.+-
T Consensus 404 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy--~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 481 (517)
T PRK13355 404 GGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFY--IFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTG 481 (517)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeE--EEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcch
Confidence 122112211 12344556888899988833776532 222 111222 2334 445567889987431
Q ss_pred ----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001769 503 ----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1016)
Q Consensus 503 ----~~~~lris~te~~t~edid~ll~aL~ 528 (1016)
.++.+|+++. .+.+++++-++.|.
T Consensus 482 F~~~~~~~~Ris~~--~~~~~l~~a~~rl~ 509 (517)
T PRK13355 482 FNWDKPDHFRVVYL--PRLEDLEDAMDRLA 509 (517)
T ss_pred hCCCCcCEEEEEeC--CCHHHHHHHHHHHH
Confidence 2578999994 57788877777664
No 500
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.17 E-value=4.8e-10 Score=119.99 Aligned_cols=301 Identities=13% Similarity=0.099 Sum_probs=196.2
Q ss_pred HHHHHHcCCCCccEEEccchHHHHHHHHHHhccccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE----eCc-----
Q 001769 218 TMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV----SDL----- 288 (1016)
Q Consensus 218 ~~iA~L~G~~~anasl~~~~Taa~eA~~~a~~~~~~~gd~Vlvs~~~Hps~~~~l~~~a~~~gi~v~~----vd~----- 288 (1016)
..++.+.|+...++++.++-|.....++.++--...+|-+|+.....+||--..+...++..|+.+.. +.+
T Consensus 118 ~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEe 197 (465)
T KOG3846|consen 118 PLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEE 197 (465)
T ss_pred hhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccccc
Confidence 47889999988788888888887777776653111257789999999999999988777777776432 222
Q ss_pred ----hhhhc-c---CCCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCcc
Q 001769 289 ----KDIDY-K---SGDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQR 358 (1016)
Q Consensus 289 ----~~L~~-l---~~~t~~V~v~~pn-~~G~i~dl~eI~~lah~~GalviV~a~~~alg~l~-~pg~~GaDivvgs~k~ 358 (1016)
+|+-. | .+..+.|+++-.. ++|+.-|+.+|...-|..|++|-.+ -+++.|-.. .-..||+||++.++.+
T Consensus 198 tlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfD-LAHAvgNVpL~LHdWgVDFACWCSYK 276 (465)
T KOG3846|consen 198 TLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFD-LAHAVGNVPLQLHDWGVDFACWCSYK 276 (465)
T ss_pred chhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechh-hhhhhcCCceEEeecCCceEEEeeec
Confidence 22222 2 3445666655443 7899999999998878888887762 223444221 2358999999999955
Q ss_pred ccccCCCCCcceEEEEeehhhhhcCCCceEee-eecCCCCcceeee--cccccccccccccCCccchhhHHHHHHHHHHH
Q 001769 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV-SIDSSGKPALRVA--MQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1016)
Q Consensus 359 lg~P~g~GGP~~Gfl~~~~~l~~~lpgrivG~-s~d~~g~~~~~l~--lqtreqhiRRekaTsnicT~~~l~a~~Aa~y~ 435 (1016)
++.. |-|| .|-+++.+++....-+|++|| +.|.. ++ |.|+ ++--+....+.-..+.|- ...++.+++
T Consensus 277 Ylna-GaGg--IgGlFvHekh~~~~~prl~GWwgh~~s-~R-F~Mdnvl~lipGa~GfRiSNPpi~---~v~al~~SL-- 346 (465)
T KOG3846|consen 277 YLNA-GAGG--IGGLFVHEKHTKESLPRLAGWWGHDPS-KR-FQMDNVLELIPGALGFRISNPPII---DVVALRSSL-- 346 (465)
T ss_pred cccc-CCCc--cceeeeehhhhcchhhHHhhhccCCcc-hh-hhhccccccCccccccccCCCcHh---HHHHHHhhH--
Confidence 5431 2233 455667777776667889997 44321 12 4432 221111111111112221 122333333
Q ss_pred HHhCcccHHHHHHHHHHHHHHHHHHHhcCCCeE-----------EcCCCCcc----EEEEecCC-HHHHHHHHHHcCcee
Q 001769 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE-----------VQGLPFFD----TVKVKCAD-AHAIASAAYKIEMNL 499 (1016)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~-----------l~~~~~~~----~v~i~~~~-~~~v~~~L~~~GI~~ 499 (1016)
..+..-.++++++|..-++.||...|+..-|.+ ++.+..++ .+++.+.. ...+-+.|.++|+.+
T Consensus 347 e~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vfqeL~krGv~~ 426 (465)
T KOG3846|consen 347 ELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVFQELHKRGVIG 426 (465)
T ss_pred HHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCchHHHHHHHHcCeec
Confidence 455556789999999999999988887641122 22222222 24555444 578889999999999
Q ss_pred ecccCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001769 500 RVVDSNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 500 ~~~~~~~lris~te-~~t~edid~ll~aL~~ 529 (1016)
....++.||+.+-+ +||..|+..++++|.+
T Consensus 427 DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e 457 (465)
T KOG3846|consen 427 DKRRPNVIRVAPVPLYNTFSDVYIFVNALNE 457 (465)
T ss_pred cccCCCceEeecchhhccHHHHHHHHHHHHH
Confidence 88789999999776 8999999999999964
Done!