Query 001769
Match_columns 1016
No_of_seqs 709 out of 6250
Neff 6.7
Searched_HMMs 29240
Date Tue Mar 26 17:01:17 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001769.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1065-1069//hhsearch_pdb/001769hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wyu_A Glycine dehydrogenase ( 1.0 1 1 530.9 42.6 421 100-529 1-435 (438)
2 1wyu_B Glycine dehydrogenase s 1.0 1 1 431.9 34.1 401 547-1003 29-472 (474)
3 1wyu_B Glycine dehydrogenase s 1.0 1 1 325.3 37.6 374 129-529 29-436 (474)
4 1wyu_A Glycine dehydrogenase ( 1.0 1 1 282.3 33.1 366 514-924 5-394 (438)
5 3mc6_A Sphingosine-1-phosphate 1.0 1 1 242.2 32.9 390 103-529 3-432 (497)
6 3mc6_A Sphingosine-1-phosphate 1.0 1 1 232.3 29.1 346 560-932 37-439 (497)
7 2jis_A Cysteine sulfinic acid 1.0 1 1 228.7 31.3 359 137-529 78-510 (515)
8 2jis_A Cysteine sulfinic acid 1.0 1 1 216.1 28.3 331 560-910 81-439 (515)
9 2dgk_A GAD-beta, GADB, glutama 1.0 1 1 213.9 36.6 350 138-529 15-429 (452)
10 3vp6_A Glutamate decarboxylase 1.0 1 1 211.1 32.7 328 560-911 68-430 (511)
No 1
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=1.00 E-value=1 Score=530.89 Aligned_cols=421 Identities=34% Similarity=0.526 Sum_probs=382.6
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCCCCC
Q ss_conf 46899999999999989099998876510399621-13789988889899999999999998607874-32113899999
Q 001769 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYN 177 (1016)
Q Consensus 100 ~r~~~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~~~ 177 (1016)
.+|||||++|+++||++||++|+||||++ ||+++ ++ +++|| +++||.++++++..++++|.. +.+|+|.|+|+
T Consensus 1 ~~~~~~~~~~~~~ml~~~g~~~~~~~~~~-~p~~~~~~-~~~lp---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 75 (438)
T 1wyu_A 1 MDYTPHTEEEIREMLRRVGAASLEDLFAH-LPKEILSP-PIDLP---EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRS 75 (438)
T ss_dssp CCCCCCCHHHHHHHHHHHTCSSTGGGGTT-SCGGGSSC-CCCCC---CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHH-CCHHHHCC-CCCCC---CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99899299999999997499988999885-85987458-78989---998999999999999843767651106777658
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 98919999999829975333598735775369999999999999870999753787053699999999982020599988
Q 001769 178 THVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKT 257 (1016)
Q Consensus 178 ~~~p~~i~~~i~~~~~~~t~ytPyq~eisqG~le~l~e~q~~ia~LtG~~~anasl~d~aTaa~ea~lla~~~~~~~~~~ 257 (1016)
+..|.++ ++++++++|++.|+|||+|++||.++.+.++++++++++|++.+|+++++|+|+++|++++++++. ++++
T Consensus 76 ~~~p~~v-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~--~gd~ 152 (438)
T 1wyu_A 76 HHVPPVV-QALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET--GRMG 152 (438)
T ss_dssp CCCCHHH-HHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH--TCCE
T ss_pred CCCCHHH-HHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCC--CCCE
T ss_conf 7182899-998746312314787760656449999999999999985998325688372789999999997607--9998
Q ss_pred EEECCCCCHHHHHHHHHHHCCCCEEEEEECCHH----HHCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHCCCEEEEEE
Q ss_conf 999499987799999985337991999908211----2113999759999849997145267999999986796999992
Q 001769 258 FIIASNCHPQTIDICITRADGFDIKVVVSDLKD----IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMAT 333 (1016)
Q Consensus 258 Vivs~~~Hps~~~~l~t~a~~~gi~v~~~d~~~----L~~i~~~t~~Viv~~pn~~G~i~di~eI~~lah~~Gal~iV~a 333 (1016)
|+++...|+++..+++.+++..|++++.++.++ ++.++++|++|++++||.+|.+.|+++|+++||++|++++|++
T Consensus 153 Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~ 232 (438)
T 1wyu_A 153 VLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVA 232 (438)
T ss_dssp EEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEEE
T ss_conf 99848658768999999998779789998676786688991887389999879987277029999999998599899986
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCC
Q ss_conf 66553578999854323999167533543778896137999604445118981676633389985206632110000011
Q 001769 334 DLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1016)
Q Consensus 334 d~~slg~l~~pg~~GaDi~vgs~k~lg~P~~~GGP~~Gfla~~~~~~r~lpgrlvG~s~d~~g~~~~~l~lqtReqhirR 413 (1016)
|..++|.+..++++|+|++++++|+||.|+++|||++||+++++++++++|++++|.+.|..|.++|.+++|+|+||+||
T Consensus 233 d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~ 312 (438)
T 1wyu_A 233 DPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRR 312 (438)
T ss_dssp CTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHG
T ss_pred CHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCCCCCH
T ss_conf 46541075897647998899778646788668998766789769999749986322223568874325632666553201
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEECCC-CCCCEEEEECCC-HHHHHH
Q ss_conf 346876430468999999999998090319999999999999999997339-98697499-974479994499-999999
Q 001769 414 DKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFDTVKVKCAD-AHAIAS 490 (1016)
Q Consensus 414 ekaTsnicT~~~l~a~~aa~y~~~~g~eGl~~ia~~~~~la~~L~~~L~~~-G~~~i~~~-~~~~~v~i~~~~-~~~i~~ 490 (1016)
+++|+|+|+++.+.++.+++|+.+++++|++++.++..++++++.++|+++ | +++... +++..+.+..+. ..++.+
T Consensus 313 ~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (438)
T 1wyu_A 313 AKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG-VRPFTPKPFFNEFALALPKDPEAVRR 391 (438)
T ss_dssp GGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT-CEECSCSSBCSEEEEECSSCHHHHHH
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEECCCCCEEEEEEEECCCCHHHHHH
T ss_conf 12567734219999999999999968888999999999999999999762898-68778998378999957999999999
Q ss_pred HHHHCCCEE--ECC---CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 999869622--001---699089983259999999999999819
Q 001769 491 AAYKIEMNL--RVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 491 ~L~~~GI~v--~~~---~~~~iris~~e~~t~edId~li~aL~~ 529 (1016)
+|.++||.+ +.. .++.+|+|+++++|++|+|+++++|+.
T Consensus 392 ~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 392 ALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp HHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99978956524566243899699995146899999999999999
No 2
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=1.00 E-value=1 Score=431.86 Aligned_cols=401 Identities=37% Similarity=0.682 Sum_probs=328.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf 29998657899889963466789899999999882064587753112556348888233340444400001599997101
Q 001769 547 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQ 626 (1016)
Q Consensus 547 ~ip~~~~~~~~~~~~p~~~~~~sE~ei~r~~~~l~~~~~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~ 626 (1016)
.||++++|++++ .+| ++||.|++|++++++++|.+++.++++||+|+|++++........+ +.+||||+|.+.
T Consensus 29 ~~p~~~~~~~~~-~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v~~~~~~~--~~~~~~~~~~~~ 101 (474)
T 1wyu_B 29 LIPKEHLREVPP-RLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARL--FADLHPYQDPRT 101 (474)
T ss_dssp HSCGGGBCSSCC-CCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHT--TSSCCTTSCGGG
T ss_pred CCCHHHHCCCCC-CCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHCCCCCCHHH
T ss_conf 399888406899-999----9899999999999983787866586226203322798999999999--973288995245
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC-CCCCEEEECCCCCCCCHHHHHHCCCEEE
Q ss_conf 355999999999999999599950162287589999999999999986099-9998899939996542998985795999
Q 001769 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1016)
Q Consensus 627 ~qG~~~~~~el~~~Lael~G~~~~~l~~~sGa~ge~a~l~air~~~~~~g~-~~~~~Ilip~saHgs~~a~a~~~G~~vv 705 (1016)
+||..+++.++++++++++|++...+++++|+++++.++++++.|+..+|+ .++++|+++.++|+++...+.+.|++++
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv 181 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVR 181 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEE
T ss_conf 86999999999999999978996365181799999999999999998547766899899958747346999998798899
Q ss_pred EECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 99189999999999999987289987999997489872221269999999997296999976462121376798755775
Q 001769 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1016)
Q Consensus 706 ~v~~d~~G~iD~e~Le~~i~~~~~~t~~I~i~~pn~~G~i~~dI~eI~~ia~~~G~~v~vDgAn~~a~~~~~~p~~~GaD 785 (1016)
.++++++|.+|+++|+++++ ++|++|++++||++|.+..++++|+++||++|+++++|+++..+..+..+++++|+|
T Consensus 182 ~v~~~~~~~~d~~~L~~~i~---~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~d 258 (474)
T 1wyu_B 182 EIPSGPEGEVDLEALKRELG---PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFD 258 (474)
T ss_dssp EECBCTTSSBCHHHHHHHCS---TTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCS
T ss_pred EECCCCCCCCCHHHHHHHHC---CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCC
T ss_conf 94579999809999997627---884699998999873107789999999998499899967404533367786657874
Q ss_pred EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99968621136788999992799888655546489986334788-7-787867898885577551244899999999984
Q 001769 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG-I-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1016)
Q Consensus 786 iv~~s~hK~l~~PhggGGpg~G~i~~~~~l~~~lp~~~~~~~g~-~-~~~~~~~~~g~i~s~~~G~~~~~~~a~a~l~~l 863 (1016)
++++|+||+|++|+|+|||++|++++++++.++++++.++..|. + .....+..++...+ ++++...+..+|+++..+
T Consensus 259 i~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 259 VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRS-FYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSS-TTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHH
T ss_conf 8998173154467878999867999727889768987650468724752557666762415-768599999999999997
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEEEEEEEC--------------------------------
Q ss_conf 83339999999999999999997500-880036999960059999955--------------------------------
Q 001769 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLR-------------------------------- 910 (1016)
Q Consensus 864 G~eGl~~~~~~~~~nA~yla~~L~~~-~~v~y~g~~~~~~he~v~~~~-------------------------------- 910 (1016)
|.+++++..++...+++|+.++|++. +++.+++ .++|++++++.
T Consensus 338 g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~l 414 (474)
T 1wyu_B 338 GLEGLKKAAALAVLNARYLKELLKEKGYRVPYDG---PSMHEFVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEAL 414 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCS---SCCSCEEEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC---CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE
T ss_conf 7888999999999999999998866695756899---7014899974799889999999997792622254666569879
Q ss_pred -----C--CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----8--613799999999999999999864987789872126999887657898999886323224687556774357
Q 001769 911 -----G--LKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWP 983 (1016)
Q Consensus 911 -----~--~~~~ld~f~~~l~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~~~~~~~p~~~~~~~k~~~ 983 (1016)
. .++++++|++.|+.+.++ +|++|+++||++
T Consensus 415 Ris~~~~~t~e~id~~~~~L~~~~~~-----------~~~~l~~~p~~~------------------------------- 452 (474)
T 1wyu_B 415 MVEPTETEAKETLEAFAEAMGALLKK-----------PKEWLENAPYST------------------------------- 452 (474)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHHHTS-----------CHHHHHTCCCSS-------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHH-----------CCHHHHCCCCCC-------------------------------
T ss_conf 99951678999999999999999984-----------911431399888-------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCC
Q ss_conf 87655444478754345685
Q 001769 984 ATGRVDNVYGDRNLICTLLP 1003 (1016)
Q Consensus 984 ~~~r~d~~~~~~~~~~~~~~ 1003 (1016)
+|+|+||++|||||+|+|..
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~ 472 (474)
T 1wyu_B 453 PVRRLDELRANKHPKLTYFD 472 (474)
T ss_dssp SSCSBCHHHHHHSCBCSSSC
T ss_pred CCCCCCCCCCCCCCEEEECC
T ss_conf 85764345555572124306
No 3
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=1.00 E-value=1 Score=325.29 Aligned_cols=374 Identities=18% Similarity=0.205 Sum_probs=295.5
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 399621-13789988889899999999999998607874---32113899999989199999998299753335987357
Q 001769 129 TVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE 204 (1016)
Q Consensus 129 ~iP~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~---~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytPyq~e 204 (1016)
.||+++ ++.+++|| ++||.++++++++++++|.. ...|+| ++++++.|.++. .+.++ ++.|+|||++
T Consensus 29 ~~p~~~~~~~~~~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~-~~~~~---~~~~~~~~~~ 99 (474)
T 1wyu_B 29 LIPKEHLREVPPRLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHE-EAARL---FADLHPYQDP 99 (474)
T ss_dssp HSCGGGBCSSCCCCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHH-HHHHT---TSSCCTTSCG
T ss_pred CCCHHHHCCCCCCCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHHHH-HHHHH---HHHCCCCCCH
T ss_conf 399888406899999----98999999999999837878665862262-033227989999-99999---9732889952
Q ss_pred -HHHHHHHHHHHHHHHHHHHCCCCCCCEEEC-CCHHHHHHHHHHHHCC---CCC---CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf -753699999999999998709997537870-5369999999998202---059---99889994999877999999853
Q 001769 205 -IAQGRLESLLNFQTMIADLTGLPMSNASLL-DEGTAAAEAMAMCNNI---QKG---KKKTFIIASNCHPQTIDICITRA 276 (1016)
Q Consensus 205 -isqG~le~l~e~q~~ia~LtG~~~anasl~-d~aTaa~ea~lla~~~---~~~---~~~~Vivs~~~Hps~~~~l~t~a 276 (1016)
.+||.++...++++++++++|++. .+++ .+||.+..+.+++.+. .++ ++++|+++...|+++...++
T Consensus 100 ~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~--- 174 (474)
T 1wyu_B 100 RTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATAS--- 174 (474)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHH---
T ss_pred HHCHHHHHHHHHHHHHHHHHHCCCC--EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHH---
T ss_conf 4586999999999999999978996--36518179999999999999999854776689989995874734699999---
Q ss_pred CCCCEEEEEECC--------HHHHC-CCCCEEEEEEECCCCCEEE-CCHHHHHHHHHHCCCEEEEEECCCCCCC--CCCC
Q ss_conf 379919999082--------11211-3999759999849997145-2679999999867969999926655357--8999
Q 001769 277 DGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVMATDLLALTI--LKPP 344 (1016)
Q Consensus 277 ~~~gi~v~~~d~--------~~L~~-i~~~t~~Viv~~pn~~G~i-~di~eI~~lah~~Gal~iV~ad~~slg~--l~~p 344 (1016)
..|++++.++. ++|++ +++++++|++++||.+|.+ .|+++|+++||++|+++++| +..+.+. ..++
T Consensus 175 -~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~D-ea~~~~~~g~~~~ 252 (474)
T 1wyu_B 175 -MAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYD-GANLNAIMGWARP 252 (474)
T ss_dssp -HTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEE-GGGGGGTTTTCCH
T ss_pred -HCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEE-CCHHHHHCCCCCC
T ss_conf -87988999457999980999999762788469999899987310778999999999849989996-7404533367786
Q ss_pred CCCCCEEEEECC-CCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCHH
Q ss_conf 854323999167-5335437788961379996044451189816766333899852066321100000113468764304
Q 001769 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1016)
Q Consensus 345 g~~GaDi~vgs~-k~lg~P~~~GGP~~Gfla~~~~~~r~lpgrlvG~s~d~~g~~~~~l~lqtReqhirRekaTsnicT~ 423 (1016)
+++|+|++++++ |+|++|+|+|||++|+++++++++++++++++|. + | ..|.+++ +++|||+|.++.. .
T Consensus 253 ~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~--~--g-~~~~~~~-~~~~~~~~~~~~~----~ 322 (474)
T 1wyu_B 253 GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVER--G--E-EGFYLDF-DRPKSIGRVRSFY----G 322 (474)
T ss_dssp HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEE--C--S-SCEEEEC-CCTTCCCCSSSTT----S
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEC--C--C-CEEEECC-CCCCCCCCCCCCC----C
T ss_conf 65787489981731544678789998679997278897689876504--6--8-7247525-5766676241576----8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCCCCEEEEECC--C-HHHHHHHHHHCCCEE
Q ss_conf 68999999999998090319999999999999999997339986974-9997447999449--9-999999999869622
Q 001769 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA--D-AHAIASAAYKIEMNL 499 (1016)
Q Consensus 424 ~~l~a~~aa~y~~~~g~eGl~~ia~~~~~la~~L~~~L~~~G~~~i~-~~~~~~~v~i~~~--~-~~~i~~~L~~~GI~v 499 (1016)
+.+....+..++..+|.++++++.++...+++++.+.|+++| +++. +...++.+.+..+ . ..++.++|.++||.+
T Consensus 323 ~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~ 401 (474)
T 1wyu_B 323 NFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEFVAQPPEGFRALDLAKGLLELGFHP 401 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 599999999999997788899999999999999999886669-5756899701489997479988999999999779262
Q ss_pred ECC-----CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 001-----699089983259999999999999819
Q 001769 500 RVV-----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 500 ~~~-----~~~~iris~~e~~t~edId~li~aL~~ 529 (1016)
... ..+.+|+++++++|++|+|+++++|+.
T Consensus 402 ~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~ 436 (474)
T 1wyu_B 402 PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA 436 (474)
T ss_dssp CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 22546665698799995167899999999999999
No 4
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=1.00 E-value=1 Score=282.35 Aligned_cols=366 Identities=19% Similarity=0.282 Sum_probs=269.4
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999998199998777776665653029998657899889963466789899999999882064587753112
Q 001769 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1016)
Q Consensus 514 ~~t~edId~li~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~sE~ei~r~~~~l~~~~~~~~~~~i~ 593 (1016)
-+|++|++..++.++.. |+++|+. +||++++++ ++ .+| .++||.++++++..++++|.. +..++
T Consensus 5 ~~~~~~~~~ml~~~g~~-----~~~~~~~----~~p~~~~~~-~~-~lp---~~~~~~~~~~~~~~l~~~~~~--~~~~~ 68 (438)
T 1wyu_A 5 PHTEEEIREMLRRVGAA-----SLEDLFA----HLPKEILSP-PI-DLP---EPLPEWKVLEELRRLAAQNLP--AHKAF 68 (438)
T ss_dssp CCCHHHHHHHHHHHTCS-----STGGGGT----TSCGGGSSC-CC-CCC---CCCCHHHHHHHHHHHHHTSCC--CTTCC
T ss_pred CCCHHHHHHHHHHCCCC-----CHHHHHH----HCCHHHHCC-CC-CCC---CCCCHHHHHHHHHHHHHCCCC--CCCCC
T ss_conf 92999999999974999-----8899988----585987458-78-989---998999999999999843767--65110
Q ss_pred CCCCCC-CCCHHHHHCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHH-HHHHHHHHHHH
Q ss_conf 556348-8882333404444000-01599997101355999999999999999599950162287589-99999999999
Q 001769 594 LGSCTM-KLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRA 670 (1016)
Q Consensus 594 LGs~t~-~~~~~~~~~~~~~~~f-~~~~p~~p~e~~qG~~~~~~el~~~Lael~G~~~~~l~~~sGa~-ge~a~l~air~ 670 (1016)
+|.|.+ ...+.........++| .+|+||+| +.+||..+++.++++++++++|++..++....|++ +.++++++++.
T Consensus 69 ~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~ 147 (438)
T 1wyu_A 69 LGGGVRSHHVPPVVQALAARGEFLTAYTPYQP-EVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRE 147 (438)
T ss_dssp CCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSG-GGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHC
T ss_conf 67776587182899998746312314787760-65644999999999999998599832568837278999999999760
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCHHH----HHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
Q ss_conf 99860999998899939996542998----98579599999189999999999999987289987999997489872221
Q 001769 671 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1016)
Q Consensus 671 ~~~~~g~~~~~~Ilip~saHgs~~a~----a~~~G~~vv~v~~d~~G~iD~e~Le~~i~~~~~~t~~I~i~~pn~~G~i~ 746 (1016)
+++++|+++...|+++... +...|++++.++. ++|.+|+++ ++ ++|++|++++||.+|.+.
T Consensus 148 -------~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~---~~t~~v~i~~pn~tG~~~ 212 (438)
T 1wyu_A 148 -------TGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG---EEVGAVVVQNPNFLGALE 212 (438)
T ss_dssp -------HTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC---TTEEEEEEESSCTTSBCC
T ss_pred -------CCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC-CCCCCCHHH----HC---CCEEEEEEECCCCCEEEE
T ss_conf -------799989984865876899999999877978999867-678668899----18---873899998799872770
Q ss_pred CCHHHHHHHHHHCCCEEEEECC-CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 2699999999972969999764-621213767987557759996862113678899999279988865554648998633
Q 001769 747 EGIDEICKIIHDNGGQVYMDGA-NMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 825 (1016)
Q Consensus 747 ~dI~eI~~ia~~~G~~v~vDgA-n~~a~~~~~~p~~~GaDiv~~s~hK~l~~PhggGGpg~G~i~~~~~l~~~lp~~~~~ 825 (1016)
|+++|+++||++|+++++|.. + +.+.+..|+++|+|++++| +|.|++|++++||++|++++++++.+.+|++..+
T Consensus 213 -~l~~i~~la~~~g~~vivd~d~~--a~g~~~~~~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g 288 (438)
T 1wyu_A 213 -DLGPFAEAAHGAGALFVAVADPL--SLGVLKPPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVS 288 (438)
T ss_dssp -CHHHHHHHHHHTTCEEEEECCTT--GGGTBCCHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEE
T ss_pred -CHHHHHHHHHHCCCEEEEEECHH--HCCCCCCCCCCCCCEEEEC-CCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEC
T ss_conf -29999999998599899986465--4107589764799889977-8646788668998766789769999749986322
Q ss_pred CC----CC------CCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--C
Q ss_conf 47----88------77878----678988855775512448999999999848333999999999999999999750--0
Q 001769 826 ST----GG------IPAPE----KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--H 889 (1016)
Q Consensus 826 ~~----g~------~~~~~----~~~~~g~i~s~~~G~~~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~ 889 (1016)
.+ +. ++.++ +.+++.+++++ +...++.+++|+..+|.+|++++.++...+++|+.++|++ +
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~---~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g 365 (438)
T 1wyu_A 289 ETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN---AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG 365 (438)
T ss_dssp EEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCH---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 2235688743256326665532011256773421---9999999999999968888999999999999999999762898
Q ss_pred CCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHH
Q ss_conf 88003699996005999995586137999999999
Q 001769 890 YPILFRGVNGTVAHEFIVDLRGLKEELDRYCDALI 924 (1016)
Q Consensus 890 ~~v~y~g~~~~~~he~v~~~~~~~~~ld~f~~~l~ 924 (1016)
+++..+ ..+++.+.++... ....|++.|.
T Consensus 366 ~~~~~~---~~~~~~~~~~~~~---~~~~~~~~L~ 394 (438)
T 1wyu_A 366 VRPFTP---KPFFNEFALALPK---DPEAVRRALA 394 (438)
T ss_dssp CEECSC---SSBCSEEEEECSS---CHHHHHHHHH
T ss_pred EEECCC---CCEEEEEEEECCC---CHHHHHHHHH
T ss_conf 687789---9837899995799---9999999999
No 5
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=242.23 Aligned_cols=390 Identities=13% Similarity=0.156 Sum_probs=277.4
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCC--CCCCCCCCCC
Q ss_conf 9999999999998909999887651039962113789988889899999999999998607--87432--1138999999
Q 001769 103 NSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASM--NKVYK--SFIGMGYYNT 178 (1016)
Q Consensus 103 ~~~~~~~~~~ml~~~g~~~~~~l~~~~iP~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~--n~~~~--~~lG~g~~~~ 178 (1016)
||++++++++||+.++.+..++|+.. +|... ...+|| +.++++.+++++++++... +..+. +|.|..+++.
T Consensus 3 ~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~ 77 (497)
T 3mc6_A 3 SPFLRGTVEKEVTKVKQSIEDELIRS-DSQLM--NFPQLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGG 77 (497)
T ss_dssp -----------------------------CCC--CCSSCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCC--CCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
T ss_conf 98367899999999999998742577-66620--026789--89989999999999986503898889998844637893
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCEEECCCHHHHHHHHHHHHCCC----C
Q ss_conf 8919999999829975333598735775369999999999999870999--753787053699999999982020----5
Q 001769 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ----K 252 (1016)
Q Consensus 179 ~~p~~i~~~i~~~~~~~t~ytPyq~eisqG~le~l~e~q~~ia~LtG~~--~anasl~d~aTaa~ea~lla~~~~----~ 252 (1016)
+.+.. .+.+....+..+++++++.++|..+...++++++++++|++ ..++.+++|+|.+...++.+.+.. +
T Consensus 78 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 78 --DDLIH-LQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp --HHHHH-HHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred --HHHHH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf --67999-999999977532788822075799999999999999848998898499837378999999999998887538
Q ss_pred C-CCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECC---------HHHHC-CCCCEEEEEEECCC-CCEEECCHHHHHH
Q ss_conf 9-99889994999877999999853379919999082---------11211-39997599998499-9714526799999
Q 001769 253 G-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIK 320 (1016)
Q Consensus 253 ~-~~~~Vivs~~~Hps~~~~l~t~a~~~gi~v~~~d~---------~~L~~-i~~~t~~Viv~~pn-~~G~i~di~eI~~ 320 (1016)
+ .+++|+++...|+++...++. .|++++.+++ ++|++ +++++++|++++|+ .+|.+.|+++|++
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYY----FGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHH----SCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHH----CCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 99776499957740789999998----59827999517645869999999987048879999789988875778999999
Q ss_pred HHHHCCCEEEEEECCCCC-----------CCC--CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCE
Q ss_conf 998679699999266553-----------578--9998543239991675335437788961379996044451189816
Q 001769 321 NAHANGVKVVMATDLLAL-----------TIL--KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1016)
Q Consensus 321 lah~~Gal~iV~ad~~sl-----------g~l--~~pg~~GaDi~vgs~k~lg~P~~~GGP~~Gfla~~~~~~r~lpgrl 387 (1016)
+||++|++++|| +.++- +.+ .....+|+|++++++++++ +||+++|+++++++..+.....+
T Consensus 231 la~~~g~~livD-~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l----~~~~~~g~~~~~~~~~~~~~~~~ 305 (497)
T 3mc6_A 231 IAQKYKLPLHVD-SCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYG----FAPKGSSVIMYRNSDLRMHQYYV 305 (497)
T ss_dssp HHHHTTCCEEEE-TTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTT----CCCSSCEEEECSSHHHHTTTSCC
T ss_pred HHHHHCCEEEEE-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHC----CCCCCCEEEEECCHHHHHHHHCC
T ss_conf 999839979997-7644566664443056677633356789718998952415----77888315886378887530102
Q ss_pred EEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC-CC
Q ss_conf 7663338998520663211000001134687643-046899999999999809031999999999999999999733-99
Q 001769 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC-TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LG 465 (1016)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtReqhirRekaTsnic-T~~~l~a~~aa~y~~~~g~eGl~~ia~~~~~la~~L~~~L~~-~G 465 (1016)
. .+..+.. .++.+++ +..........+.+..++.+|++++.+++.++++++++.|++ +.
T Consensus 306 ~---~~~~~~~----------------~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 366 (497)
T 3mc6_A 306 N---PAWTGGL----------------YGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIP 366 (497)
T ss_dssp B---TTCTTSC----------------BCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred C---CCCCCCC----------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 6---6655777----------------67867563776426999999999982878999999999999999999985099
Q ss_pred CEEECCCCCCCEEEEECCC--HHHHHHHHHHCCCEEECC-CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 8697499974479994499--999999999869622001-699089983259999999999999819
Q 001769 466 TVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV-DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 466 ~~~i~~~~~~~~v~i~~~~--~~~i~~~L~~~GI~v~~~-~~~~iris~~e~~t~edId~li~aL~~ 529 (1016)
+++++..+....+.+..++ ..++.+.|.++||.++.. .+..+|++++ .+|++|+|+++++|+.
T Consensus 367 g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~ 432 (497)
T 3mc6_A 367 DLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVVDEICDILRT 432 (497)
T ss_dssp TCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHH
T ss_pred CEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEEE-CCCHHHHHHHHHHHHH
T ss_conf 98996688714899967998999999999968979866789976899985-8999999999999999
No 6
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=232.34 Aligned_cols=346 Identities=16% Similarity=0.167 Sum_probs=239.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCC--CCCCCCCCCCCCC-CCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 996346678989999999988206--4587753112556-3488882333404444000015999971013559999999
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSK--ELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1016)
Q Consensus 560 ~~p~~~~~~sE~ei~r~~~~l~~~--~~~~~~~~i~LGs-~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~e 636 (1016)
.+| ..++++.+++++++++... +..+..+.+ +|. +... ....+.+...+..+.+.+++++ +.++|..++..+
T Consensus 37 ~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 111 (497)
T 3mc6_A 37 QLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKV-SGAVYHGG-DDLIHLQTIAYEKYCVANQLHP-DVFPAVRKMESE 111 (497)
T ss_dssp SCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCB-SSSCSCCC-HHHHHHHHHHHHHTSSCBTTCT-TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCE-EEECCCCC-HHHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHH
T ss_conf 789--899899999999999865038988899988-44637893-6799999999997753278882-207579999999
Q ss_pred HHHHHHHHHCCC--C-EEEECCCHHHHHHHHHHHHHHHHHH-CCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCC-
Q ss_conf 999999995999--5-0162287589999999999999986-0999998899939996542998985795999991899-
Q 001769 637 LGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKA-RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1016)
Q Consensus 637 l~~~Lael~G~~--~-~~l~~~sGa~ge~a~l~air~~~~~-~g~~~~~~Ilip~saHgs~~a~a~~~G~~vv~v~~d~- 711 (1016)
+++++++++|++ . ..+++++|+++.+.++.+++.+... +|. .+++|+++...|+++...+...|++++.|++++
T Consensus 112 ~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~-~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 190 (497)
T 3mc6_A 112 VVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGI-TEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT 190 (497)
T ss_dssp HHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCC-SSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCC
T ss_conf 999999984899889849983737899999999999888753899-7764999577407899999985982799951764
Q ss_pred CCCCCHHHHHHHHHCCCCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC---------CC--CCC
Q ss_conf 99999999999987289987999997489-8722212699999999972969999764621213---------76--798
Q 001769 712 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---------GL--TSP 779 (1016)
Q Consensus 712 ~G~iD~e~Le~~i~~~~~~t~~I~i~~pn-~~G~i~~dI~eI~~ia~~~G~~v~vDgAn~~a~~---------~~--~~p 779 (1016)
++.+|+++|+++++ +++++|++++|+ .+|.++ |+++|+++|+++|+++++|.++..... .+ ...
T Consensus 191 ~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~-~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~ 266 (497)
T 3mc6_A 191 TYQVDLGKVKKFIN---KNTVLLVGSAPNFPHGIAD-DIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF 266 (497)
T ss_dssp TCSBCTTTTGGGCC---SSEEEEEEETTCTTTCCCC-SCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST
T ss_pred CCCCCHHHHHHHHH---HCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 58699999999870---4887999978998887577-8999999999839979997764456666444305667763335
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 755775999686211367889999927998886555464899863-3478877878678988855775512448999999
Q 001769 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1016)
Q Consensus 780 ~~~GaDiv~~s~hK~l~~PhggGGpg~G~i~~~~~l~~~lp~~~~-~~~g~~~~~~~~~~~g~i~s~~~G~~~~~~~a~a 858 (1016)
...|+|+++.++||+++ +++++|+++++++.......... ...+ .......+.++.. ...++..|+
T Consensus 267 ~~~g~d~~~~s~~K~l~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~--~~~~~a~~a 333 (497)
T 3mc6_A 267 RVPGVTSISCDTHKYGF-----APKGSSVIMYRNSDLRMHQYYVNPAWTG------GLYGSPTLAGSRP--GAIVVGCWA 333 (497)
T ss_dssp TSTTCCEEEEETTTTTC-----CCSSCEEEECSSHHHHTTTSCCBTTCTT------SCBCCSSSCSSCB--HHHHHHHHH
T ss_pred CCCCCCEEEECCHHHCC-----CCCCCEEEEECCHHHHHHHHCCCCCCCC------CCCCCCCCCCCCC--CHHHHHHHH
T ss_conf 67897189989524157-----7888315886378887530102666557------7767867563776--426999999
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCCEEEEEEEEECC------------------------
Q ss_conf 999848333999999999999999999750---08800369999600599999558------------------------
Q 001769 859 YIAMMGSKGLTEASKIAILNANYMAKRLEK---HYPILFRGVNGTVAHEFIVDLRG------------------------ 911 (1016)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~nA~yla~~L~~---~~~v~y~g~~~~~~he~v~~~~~------------------------ 911 (1016)
.+..+|.+|+++..++...+++|+.++|++ ++++..+. ....+.++..+
T Consensus 334 al~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~----~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~ 409 (497)
T 3mc6_A 334 TMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNP----RYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPV 409 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCC----CSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC----CEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCC
T ss_conf 99998287899999999999999999998509998996688----71489996799899999999996897986678997
Q ss_pred ---------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---------613799999999999999999
Q 001769 912 ---------LKEELDRYCDALISIREEIAQ 932 (1016)
Q Consensus 912 ---------~~~~ld~f~~~l~~i~~e~~~ 932 (1016)
..+++++|+++|+.+.+++..
T Consensus 410 ~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 410 ALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp CEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 689998589999999999999999999983
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=1.00 E-value=1 Score=228.70 Aligned_cols=359 Identities=14% Similarity=0.079 Sum_probs=237.2
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC-CCC--HHHHHHHHHH
Q ss_conf 789988889899999999999998607874--32113899999989199999998299753335-987--3577536999
Q 001769 137 DSMKFSKFDEGLTESQMIEHMQKLASMNKV--YKSFIGMGYYNTHVPPVILRNIMENPAWYTQY-TPY--QAEIAQGRLE 211 (1016)
Q Consensus 137 ~~~~lp~~~~~~sE~e~~~~~~~la~~n~~--~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~y-tPy--q~eisqG~le 211 (1016)
.++.+| .+++++.+++++++++...+.. ...|++....+ ..|..+.. +|++++ +|+ +.+.+++..+
T Consensus 78 ~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~------~~l~~~~n~~~~~~~~s~~~~~ 148 (515)
T 2jis_A 78 LDLELR--SQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSG-LDPHALAG------RIITESLNTSQYTYEIAPVFVL 148 (515)
T ss_dssp HCCCCC--SSCCCHHHHHHHHHHHHHHSCCTTSTTEESSSCCC-CCHHHHHH------HHHHHHHCCCTTCTTTCHHHHH
T ss_pred CCCCCC--CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC-CCHHHHHH------HHHHHHHCCCCCCHHHCHHHHH
T ss_conf 456789--89999999999999996189989999947772279-98899999------9999986557786444667899
Q ss_pred HHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCC-----CCCCC------EEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 9999999999870999753787053699999999982020-----59998------899949998779999998533799
Q 001769 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-----KGKKK------TFIIASNCHPQTIDICITRADGFD 280 (1016)
Q Consensus 212 ~l~e~q~~ia~LtG~~~anasl~d~aTaa~ea~lla~~~~-----~~~~~------~Vivs~~~Hps~~~~l~t~a~~~g 280 (1016)
...++++++++++|++..++.+++|+|.++..++.+.+.. +.+++ +|+++...|+++...++.+ +.|
T Consensus 149 le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~--g~g 226 (515)
T 2jis_A 149 MEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFL--GLG 226 (515)
T ss_dssp HHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT--TSC
T ss_pred HHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHC--CCC
T ss_conf 999999999998489998869858828999999999999875577642766667869997887618999999975--999
Q ss_pred E-EEEEECC--------HHHHC-CCC------CEEEEEEECC-CCCEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 1-9999082--------11211-399------9759999849-9971452679999999867969999926655357899
Q 001769 281 I-KVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP 343 (1016)
Q Consensus 281 i-~v~~~d~--------~~L~~-i~~------~t~~Viv~~p-n~~G~i~di~eI~~lah~~Gal~iV~ad~~slg~l~~ 343 (1016)
. +++.++. ++|++ +++ ++++|++++| |.+|.+.|+++|+++||++|++++|++ .++.+.+..
T Consensus 227 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~-a~~~~~~~~ 305 (515)
T 2jis_A 227 TDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDA-AWGGSVLLS 305 (515)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEE-TTGGGGGGC
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEH-HHHHHHHHC
T ss_conf 8838998649998698999999999999689974799996899998785679999999998399699855-325688859
Q ss_pred C-------CCCCCEEEEECC-CCCCCCCCCCCCCEEEEEEEHH--HHHC----CCCCEEEEEECCCCCC-CEEEECCCCC
Q ss_conf 9-------854323999167-5335437788961379996044--4511----8981676633389985-2066321100
Q 001769 344 P-------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRM----MPGRIVGVSIDSSGKP-ALRVAMQTRE 408 (1016)
Q Consensus 344 p-------g~~GaDi~vgs~-k~lg~P~~~GGP~~Gfla~~~~--~~r~----lpgrlvG~s~d~~g~~-~~~l~lqtRe 408 (1016)
+ +-.++|++++++ |+|++|. ++|+++++++ ++++ .++.+.+...+..+.. ...+.+
T Consensus 306 ~~~~~~~~g~~~aD~v~~s~hK~l~~p~-----g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~---- 376 (515)
T 2jis_A 306 QTHRHLLDGIQRADSVAWNPHKLLAAGL-----QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVV---- 376 (515)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCS----
T ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCC-----CEEEEEEECHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC----
T ss_conf 4238653798658989987500259987-----7367888473889998744896001677656566578788888----
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCEEEEEC-C---
Q ss_conf 00011346876430468999999999998090319999999999999999997339-986974999744799944-9---
Q 001769 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKC-A--- 483 (1016)
Q Consensus 409 qhirRekaTsnicT~~~l~a~~aa~y~~~~g~eGl~~ia~~~~~la~~L~~~L~~~-G~~~i~~~~~~~~v~i~~-~--- 483 (1016)
|..||.++ ..+++. +..+|.+|++++.+++.++++++.+.|+++ | ++++.++.+..|.|.. +
T Consensus 377 ~~~rr~~a-------l~~~~~-----l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g-~~~~~~~~~~~v~f~~~p~~~ 443 (515)
T 2jis_A 377 QCGRRVDC-------LKLWLM-----WKAQGDQGLERRIDQAFVLARYLVEEMKKREG-FELVMEPEFVNVCFWFVPPSL 443 (515)
T ss_dssp CSSCCCCH-------HHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT-EEESSCCSSSEEEEEECCGGG
T ss_pred CCCCCCCH-------HHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEECCCCEEEEEEEEECCCC
T ss_conf 88885209-------999999-----99984999999999999999999999733899-799679870599999857543
Q ss_pred -------C-H-------HHHHHHHHHCCCEE-EC--CC--CCEEEEEE-CCCCCHHHHHHHHHHHHC
Q ss_conf -------9-9-------99999999869622-00--16--99089983-259999999999999819
Q 001769 484 -------D-A-------HAIASAAYKIEMNL-RV--VD--SNTVTASF-DETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 484 -------~-~-------~~i~~~L~~~GI~v-~~--~~--~~~iris~-~e~~t~edId~li~aL~~ 529 (1016)
. . ..+.+.|.+.|+.+ .. .. .+.+|+++ ++++|++|||+++++|+.
T Consensus 444 ~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~ 510 (515)
T 2jis_A 444 RGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELER 510 (515)
T ss_dssp TTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 4433434679999999999999999659799997798896389999928999999999999999999
No 8
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=1.00 E-value=1 Score=216.09 Aligned_cols=331 Identities=14% Similarity=0.093 Sum_probs=219.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99634667898999999998820645877531125563488882333404444000015999971013559999999999
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 639 (1016)
Q Consensus 560 ~~p~~~~~~sE~ei~r~~~~l~~~~~~~~~~~i~LGs~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~el~~ 639 (1016)
.+| ..+.++.+++++++++...+.... +..+++.......+...... ....+.+-+.++. +.+++..+++.++++
T Consensus 81 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~-~l~~~~n~~~~~~-~~s~~~~~le~~~~~ 155 (515)
T 2jis_A 81 ELR--SQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGR-IITESLNTSQYTY-EIAPVFVLMEEEVLR 155 (515)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHHSCCTT-STTEESSSCCCCCHHHHHHH-HHHHHHCCCTTCT-TTCHHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHCCCCCCC-CCCEEEEEECCCCHHHHHHH-HHHHHHCCCCCCH-HHCHHHHHHHHHHHH
T ss_conf 789--899999999999999961899899-99947772279988999999-9999865577864-446678999999999
Q ss_pred HHHHHHCCCCE-EEECCCHHHHHHHHHHHHHHHH----HHCCC--CCCCEEEECCCCCCCCHHHHHHCCC---EEEEECC
Q ss_conf 99999599950-1622875899999999999999----86099--9998899939996542998985795---9999918
Q 001769 640 WLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAAMCGM---KIVSVGT 709 (1016)
Q Consensus 640 ~Lael~G~~~~-~l~~~sGa~ge~a~l~air~~~----~~~g~--~~~~~Ilip~saHgs~~a~a~~~G~---~vv~v~~ 709 (1016)
|+++++|++.. .++.++|+++++.++.++|.+. ...|+ .++.+|+++..+|.++.+.+...|+ +++.|++
T Consensus 156 ~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~ 235 (515)
T 2jis_A 156 KLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA 235 (515)
T ss_dssp HHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB
T ss_pred HHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 99998489998869858828999999999999875577642766667869997887618999999975999883899864
Q ss_pred CCCCCCCHHHHHHHHHCC---CCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCC-----CCC
Q ss_conf 999999999999998728---9987999997489-8722212699999999972969999764621213767-----987
Q 001769 710 DAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-----SPG 780 (1016)
Q Consensus 710 d~~G~iD~e~Le~~i~~~---~~~t~~I~i~~pn-~~G~i~~dI~eI~~ia~~~G~~v~vDgAn~~a~~~~~-----~p~ 780 (1016)
+++|.+|+++|+++|++. +.++++|++++|+ .+|.++ |+++|+++|+++|+++|+|+++..+..... ..+
T Consensus 236 ~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~-~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g 314 (515)
T 2jis_A 236 DERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD-PLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDG 314 (515)
T ss_dssp CTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTT
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEEEHHHHHHHHHCHHHHHHCCC
T ss_conf 99986989999999999996899747999968999987856-79999999998399699855325688859423865379
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCC--CCCC----CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 5577599968621136788999992799888655--5464----8998633478877-8786789888557755124489
Q 001769 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF----LPSHPVVSTGGIP-APEKSQPLGTIAAAPWGSALIL 853 (1016)
Q Consensus 781 ~~GaDiv~~s~hK~l~~PhggGGpg~G~i~~~~~--l~~~----lp~~~~~~~g~~~-~~~~~~~~g~i~s~~~G~~~~~ 853 (1016)
..++|++++|+||+++.|. ++|+++++++ +... .+....+...... .++ .....+ ..+.....
T Consensus 315 ~~~aD~v~~s~hK~l~~p~-----g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~--~~~~~~---~~~rr~~a 384 (515)
T 2jis_A 315 IQRADSVAWNPHKLLAAGL-----QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALD--TGDKVV---QCGRRVDC 384 (515)
T ss_dssp GGGCSEEEECTTSTTCCCS-----CCEEEEESCCSCHHHHHHCC---------CCSCGGGC--CGGGCS---CSSCCCCH
T ss_pred CCCCCEEEECCCCCCCCCC-----CEEEEEEECHHHHHHHHHCCCCHHCCCCCCCCCCCCC--CCCCCC---CCCCCCCH
T ss_conf 8658989987500259987-----7367888473889998744896001677656566578--788888---88885209
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCEEEEEEEEEC
Q ss_conf 999999998483339999999999999999997500--880036999960059999955
Q 001769 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLR 910 (1016)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~~--~~v~y~g~~~~~~he~v~~~~ 910 (1016)
+..|+.++.+|.+|++++.++...+++|+.++|++. +++..+ +....+++...
T Consensus 385 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~----~~~~~v~f~~~ 439 (515)
T 2jis_A 385 LKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVME----PEFVNVCFWFV 439 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSC----CSSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC----CCEEEEEEEEE
T ss_conf 99999999984999999999999999999999733899799679----87059999985
No 9
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=1.00 E-value=1 Score=213.85 Aligned_cols=350 Identities=12% Similarity=0.072 Sum_probs=237.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCC-C---CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89988889899999999999998607874-3---2113899999989199999998299753335987357753699999
Q 001769 138 SMKFSKFDEGLTESQMIEHMQKLASMNKV-Y---KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESL 213 (1016)
Q Consensus 138 ~~~lp~~~~~~sE~e~~~~~~~la~~n~~-~---~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytPyq~eisqG~le~l 213 (1016)
+++|| .+++++.++++++.++..++.. . .+|.+ +..++.+.+.+.+.-. -.+++++.+++..+..
T Consensus 15 ~~~lp--~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~-----~~~~~~v~e~~~~a~~----~~~~~~~~~~~~~~l~ 83 (452)
T 2dgk_A 15 SKRFP--LHEMRDDVAFQIINDELYLDGNARQNLATFCQ-----TWDDENVHKLMDLSIN----KNWIDKEEYPQSAAID 83 (452)
T ss_dssp CCSCC--CSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC-----CCCCHHHHHHHHHTTT----CBTTCTTTCHHHHHHH
T ss_pred CCCCC--CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEC-----CCCHHHHHHHHHHHHC----CCCCCHHHCHHHHHHH
T ss_conf 78878--89999999999999985578987667897067-----7764999999999861----5789733376599999
Q ss_pred HHHHHHHHHHCCCCCCC-----EEECCCHHHHHHHHHHHHCCC-------CC---CCCEEEECCCCCHHHHHHHHHHHCC
Q ss_conf 99999999870999753-----787053699999999982020-------59---9988999499987799999985337
Q 001769 214 LNFQTMIADLTGLPMSN-----ASLLDEGTAAAEAMAMCNNIQ-------KG---KKKTFIIASNCHPQTIDICITRADG 278 (1016)
Q Consensus 214 ~e~q~~ia~LtG~~~an-----asl~d~aTaa~ea~lla~~~~-------~~---~~~~Vivs~~~Hps~~~~l~t~a~~ 278 (1016)
.++++++++++|++..+ +.+++|+|.++..++++.+.. .+ .+++|+++. .|+++...++.
T Consensus 84 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~---- 158 (452)
T 2dgk_A 84 LRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY---- 158 (452)
T ss_dssp HHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH----
T ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCHHHHHHHHH----
T ss_conf 9999999998489933356886499387899999999999999987887548887782799888-73999999987----
Q ss_pred CCEEEEEECCH---------HHHC-CCCCEEEEEEECC-CCCEEECCHHHHHHHHHHC------CCEEEEEECCCCCCCC
Q ss_conf 99199990821---------1211-3999759999849-9971452679999999867------9699999266553578
Q 001769 279 FDIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMATDLLALTIL 341 (1016)
Q Consensus 279 ~gi~v~~~d~~---------~L~~-i~~~t~~Viv~~p-n~~G~i~di~eI~~lah~~------Gal~iV~ad~~slg~l 341 (1016)
.|++++.++.+ +|++ ++++|++|++++| |.+|.+.|+++|+++||++ |++++||+ ..+.+..
T Consensus 159 ~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~-a~~~~~~ 237 (452)
T 2dgk_A 159 WDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDA-ASGGFLA 237 (452)
T ss_dssp TTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEEC-TTGGGTH
T ss_pred CCCEEEEEECCCCCCEECHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEC-CCHHHHH
T ss_conf 694579974288887397999999986688899997588688230799999999999865107897279974-5177787
Q ss_pred ---CCC-----CCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHH-HH-HCCCCCEEEEEECCCCCCCE-EEECCCCCCC
Q ss_conf ---999-----8543239991675335437788961379996044-45-11898167663338998520-6632110000
Q 001769 342 ---KPP-----GELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE-YK-RMMPGRIVGVSIDSSGKPAL-RVAMQTREQH 410 (1016)
Q Consensus 342 ---~~p-----g~~GaDi~vgs~k~lg~P~~~GGP~~Gfla~~~~-~~-r~lpgrlvG~s~d~~g~~~~-~l~lqtReqh 410 (1016)
.++ ...|+|++++++++|+ ++|+++|+++++++ ++ +.+.- .....+.. + ...+
T Consensus 238 ~~~~~~~~~~~~~~~~d~~~~~~hK~~----~~~~~~G~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~------ 301 (452)
T 2dgk_A 238 PFVAPDIVWDFRLPRVKSISASGHKFG----LAPLGCGWVIWRDEEALPQELVF-----NVDYLGGQ-IGTFAI------ 301 (452)
T ss_dssp HHHCTTCCCSTTSTTEEEEEEETTTTT----CCCSSCEEEEESSGGGSCGGGCE-----EECCTTCC-EEECCS------
T ss_pred HHHCCCCHHHCCCCCCCEEEECCCCCC----CCCCCEEEEEECCHHHHHHHHCC-----CCCCCCCC-CCCCCC------
T ss_conf 740854242227888737987763356----89888689998599997887446-----86534899-887560------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCC----CCCCEEEEECCC--
Q ss_conf 01134687643046899999999999809031999999999999999999733998697499----974479994499--
Q 001769 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD-- 484 (1016)
Q Consensus 411 irRekaTsnicT~~~l~a~~aa~y~~~~g~eGl~~ia~~~~~la~~L~~~L~~~G~~~i~~~----~~~~~v~i~~~~-- 484 (1016)
.++... ...++..++ +..+|.+|++++.++..++++++.+.|+++++++++.+ +.++.+.|+.++
T Consensus 302 ----~~~r~~---~~~~~~~aa--l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~ 372 (452)
T 2dgk_A 302 ----NFSRPA---GQVIAQYYE--FLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 372 (452)
T ss_dssp ----CCSCBC---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC
T ss_pred ----CCCCHH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCC
T ss_conf ----789724---899999999--99973999999999999999999999974899699437888887689999955864
Q ss_pred -----HHHHHHHHHHCCCEEECC-------CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf -----999999999869622001-------699089983259999999999999819
Q 001769 485 -----AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1016)
Q Consensus 485 -----~~~i~~~L~~~GI~v~~~-------~~~~iris~~e~~t~edId~li~aL~~ 529 (1016)
..++.++|.++||.++.. ....+|++++..+|++|+|+|+++|+.
T Consensus 373 ~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~ 429 (452)
T 2dgk_A 373 DPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA 429 (452)
T ss_dssp CCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 344799999999996498621350786637828999994588889999999999999
No 10
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=1.00 E-value=1 Score=211.09 Aligned_cols=328 Identities=15% Similarity=0.107 Sum_probs=212.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH---HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 996346678989999999988206458775311255634888823---33404444000015999971013559999999
Q 001769 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT---TEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1016)
Q Consensus 560 ~~p~~~~~~sE~ei~r~~~~l~~~~~~~~~~~i~LGs~t~~~~~~---~~~~~~~~~~f~~~~p~~p~e~~qG~~~~~~e 636 (1016)
.+| ..+.++.+++++++++...+..+. +..++|.-....... .++..... +-+.+.. +.+++..+++.+
T Consensus 68 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~f~~~~~~~~~~~~~~~e~l~~~~----~~~~~~~-~~~p~~~~le~~ 139 (511)
T 3vp6_A 68 ELS--DHPESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTGLDIIGLAGEWLTSTA----NTNMFTY-EIAPVFVLMEQI 139 (511)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHTSCCTT-STTEESSSSCCCCHHHHHHHHHHHHH----CCCSSCT-TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHCCCCCC-CCCCEEEECCCCCHHHHHHHHHHHHH----CCCCCCC-CCCCHHHHHHHH
T ss_conf 999--899999999999999865447789-99815864699868999999999874----5677770-228038999999
Q ss_pred HHHHHHHHHCCCC---EEEECCCHHHHHHHHHHHHHHHH----HHCCC--CCCCEEEECCCCCCCCHHHHHHCCC---EE
Q ss_conf 9999999959995---01622875899999999999999----86099--9998899939996542998985795---99
Q 001769 637 LGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAAMCGM---KI 704 (1016)
Q Consensus 637 l~~~Lael~G~~~---~~l~~~sGa~ge~a~l~air~~~----~~~g~--~~~~~Ilip~saHgs~~a~a~~~G~---~v 704 (1016)
+.+|+++++|++. ..+++++|+++++.++++++... ...|. .++++|+++..+|.++.+.+...|+ ++
T Consensus 140 ~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~ 219 (511)
T 3vp6_A 140 TLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNV 219 (511)
T ss_dssp HHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCE
T ss_conf 99999998389987880698984599999999999987423666537666887389987973699999999859997747
Q ss_pred EEECCCCCCCCCHHHHHHHHHCC---CCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-
Q ss_conf 99918999999999999998728---9987999997489-872221269999999997296999976462121376798-
Q 001769 705 VSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (1016)
Q Consensus 705 v~v~~d~~G~iD~e~Le~~i~~~---~~~t~~I~i~~pn-~~G~i~~dI~eI~~ia~~~G~~v~vDgAn~~a~~~~~~p- 779 (1016)
+.++++++|.+|+++|+++|++. +..+++|++++|+ .+|.++ |+++|+++|+++|+++|+|+|+..+.. ..|
T Consensus 220 ~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd-~l~~I~~ia~~~~~~lhvD~a~~~~~~--~~~~ 296 (511)
T 3vp6_A 220 ILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD-PIQEIADICEKYNLWLHVDAAWGGGLL--MSRK 296 (511)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBC-CHHHHHHHHHHHTCEEEEEETTGGGGG--GCTT
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCCHHHHH--HCHH
T ss_conf 9960587776299999999998886699847999956888885440-299999999985998999851245676--4901
Q ss_pred ------CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCC-CCCC----CCCCCCCCCCCCC-CCC-CCCCCCCCCCCC
Q ss_conf ------75577599968621136788999992799888655-5464----8998633478877-878-678988855775
Q 001769 780 ------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPF----LPSHPVVSTGGIP-APE-KSQPLGTIAAAP 846 (1016)
Q Consensus 780 ------~~~GaDiv~~s~hK~l~~PhggGGpg~G~i~~~~~-l~~~----lp~~~~~~~g~~~-~~~-~~~~~g~i~s~~ 846 (1016)
+..++|++++++||+|+.|. +.|++++++. +... .+.........+. .++ ....+ .
T Consensus 297 ~~~~~~g~~~aDsv~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~------~ 365 (511)
T 3vp6_A 297 HRHKLNGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAI------Q 365 (511)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSS------C
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCCC-----CEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC------C
T ss_conf 04333687448889988400358986-----769999938899998853697402576655666557667777------7
Q ss_pred CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCEEEEEEEEECC
Q ss_conf 512448999999999848333999999999999999999750--08800369999600599999558
Q 001769 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK--HYPILFRGVNGTVAHEFIVDLRG 911 (1016)
Q Consensus 847 ~G~~~~~~~a~a~l~~lG~eGl~~~~~~~~~nA~yla~~L~~--~~~v~y~g~~~~~~he~v~~~~~ 911 (1016)
.+....++..|+.++.+|.+|++++.++...+++|++++|++ ++++..+. .+....+++.+.+
T Consensus 366 ~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~--~p~~~~v~f~~~p 430 (511)
T 3vp6_A 366 CGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG--EPEHTNVCFWYIP 430 (511)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSS--CCSSSCEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC--CCCEEEEEEEEEC
T ss_conf 8972689999999998769999999999999999999998568987998659--9976899999867
Done!