Query 001775
Match_columns 1015
No_of_seqs 410 out of 3573
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 15:49:17 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001775.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1074-1078//hhsearch_pdb/001775hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 1.0 1 1 1205.3 91.7 875 115-1013 54-1019(1034)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 1193.5 85.3 875 115-1013 49-1013(1028)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 1170.7 87.4 884 115-1013 6-988 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 1068.0 60.8 795 122-1013 76-877 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 1044.3 -14.2 812 117-1013 17-840 (885)
6 3j09_A COPA, copper-exporting 1.0 1 1 757.3 37.4 673 42-863 14-713 (723)
7 3rfu_A Copper efflux ATPase; a 1.0 1 1 747.0 50.7 576 156-861 128-731 (736)
8 3j08_A COPA, copper-exporting 1.0 1 1 712.6 46.5 570 157-863 47-635 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 253.9 0.0 260 424-814 4-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 212.8 21.5 278 424-812 8-287 (287)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=1205.31 Aligned_cols=875 Identities=27% Similarity=0.372 Sum_probs=739.3
Q ss_pred HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
Q ss_conf 705998999882899579999047879999982299745999984299999999955569999999999999988615--
Q 001775 115 FHGGVTGIAEKLSTSISDGLTSNTDLFNRRQEIYGLNQFAESTPRSFWVFVWEALQDMTLMILGACAFVSLIVGIVME-- 192 (1015)
Q Consensus 115 ~~~~v~gl~~~l~t~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~~~~~~~~ill~~a~is~~~~~~~~-- 192 (1015)
+...+++++..|++++..||+.++ +.+|+++||+|.+++++.+++|+.++++|++++.++++++++++++.+....
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 449999999985979121979999--999998509998999899988999999984738999999999999999874034
Q ss_pred C-C--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCEEEEECCCCEEC
Q ss_conf 9-9--998411589999999999987629999998899988331697589998997999972565667099967998423
Q 001775 193 G-W--PHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIYVQVTRNGFRQKLSIYDLLPGDIVHLGIGDQVP 269 (1015)
Q Consensus 193 g-~--~~~~~d~~~i~~~illv~~v~a~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~i~~Gd~IP 269 (1015)
+ + ...|++++.+++.+++..++..+.+++.++..+++.+ ..+..++|+|||++++|++++|||||||.+++||+||
T Consensus 132 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~-l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VP 210 (1034)
T 3ixz_A 132 GDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKN-LVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVP 210 (1034)
T ss_pred CCCCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEC
T ss_conf 777654420564243013227999999999999999999762-4897359999998999888987988589985796435
Q ss_pred CCEEEEEECCEEEECCCCCCCCCCEECCCC---------CCCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 438999404234840236799982103899---------96100252565180999999990223276899861689999
Q 001775 270 ADGLFVSGFSVLIDESSLTGESEPVMVNEE---------NPFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGDD 340 (1015)
Q Consensus 270 ADgili~g~~l~VDES~LTGEs~pv~k~~~---------~~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 340 (1015)
|||++++|+++.||||+|||||.|+.|..+ .+.+|+||.+.+|.++++|++||.+|++|+|.+++.+.+.+
T Consensus 211 AD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~ 290 (1034)
T 3ixz_A 211 ADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENE 290 (1034)
T ss_pred CCEEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCC
T ss_conf 87699970880588336678877766557776656323445122040698604249999602543740899862035667
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98269999999999999999999999999999885402478864556752258899999999876664315625999999
Q 001775 341 ETPLQVKLNGVATIIGKGGLFFAVVTFAVLVQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVTL 420 (1015)
Q Consensus 341 ~t~lq~~l~~~a~~i~~~~l~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~~ 420 (1015)
++|+|+++++++..+..+++.+++++|++++.. +. .+.+.+..++++++++|||+||+++|+
T Consensus 291 ~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~l~v~~iPe~Lp~~vti 352 (1034)
T 3ixz_A 291 KTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------GY----------TFLRAMVFFMAIVVAYVPEGLLATVTV 352 (1034)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CC----------HHHHHHHHHHHHHHHEECCCCHHHHHH
T ss_conf 891899999999999999999999999999996--------41----------299999999999882026650899999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999840654434603554207812784066574324852799999827111015778757557899948999999
Q 001775 421 SLAFAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLL 500 (1015)
Q Consensus 421 ~l~~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 500 (1015)
++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+..............+..+.+.
T Consensus 353 ~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 432 (1034)
T 3ixz_A 353 CLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALC 432 (1034)
T ss_pred HHHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999998733882864767888615872997289787236837999999779512256766656655676778999999
Q ss_pred HHHHHCCCCEEEECCCC----CEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECC---CC
Q ss_conf 99984388527741799----602258902999999999739992665301632688178899951899998089---91
Q 001775 501 QSIFTNTGGEVVVNKDG----KREILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPG---GG 573 (1015)
Q Consensus 501 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~---~~ 573 (1015)
...++|+.+....+.++ .....|+|+|.|+++++...+.+....+..+++++.+||+|+||+|++++...+ ++
T Consensus 433 ~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~ 512 (1034)
T 3ixz_A 433 RVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPR 512 (1034)
T ss_pred HHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 99887162665357677766574355492599999999985788688897486069950357772689999833788860
Q ss_pred EEEEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--------CCCCCCCC
Q ss_conf 8999738615774036322246991203899889999999999998002001033663268999--------99988775
Q 001775 574 LRAHSKGASEIVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFS--------PENPIPVS 645 (1015)
Q Consensus 574 ~~~~~KGa~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~--------~~~~~~~~ 645 (1015)
+.+++|||||.++++|+.+. .+|...|++++.++.+.+.+++++.+|+|++++|||+++.+.. ++.+..++
T Consensus 513 ~~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~ 591 (1034)
T 3ixz_A 513 HVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTS 591 (1034)
T ss_pred EEEEEECCHHHHHHHHHHHH-CCCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHHHHHCCCC
T ss_conf 89999688499999737755-28964019999999999999998714758236867855800043211245344302224
Q ss_pred CEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC-----------------------
Q ss_conf 425665640249896106999999986898799986899889999999919977995-----------------------
Q 001775 646 GYTLIAIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDG----------------------- 702 (1015)
Q Consensus 646 ~l~llG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGd~~~ta~~ia~~~gi~~~~~----------------------- 702 (1015)
|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++.
T Consensus 592 ~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 671 (1034)
T 3ixz_A 592 GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDAR 671 (1034)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCC
T ss_conf 86798887136887065999999999869969999699779999999986999887247888887617650002544543
Q ss_pred -EEEECHHHCCCCHHHHHHHCCCE--EEEEECCHHCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCEEEECCCCCH
Q ss_conf -02306000025999998453650--699961920099999999642799899984898891233106900530578838
Q 001775 703 -IAIEGPVFREKTTEELMELIPKI--QVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 779 (1015)
Q Consensus 703 -~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~~p~~K~~iv~~l~~~~g~~v~~vGDg~ND~~al~~Advgiamgi~g~~ 779 (1015)
.+++|.++..+.++++.+.+.+. .+|+|++|+||..+++.+|+. |++|+|+|||.||+|||++||+|||||++|+|
T Consensus 672 ~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d 750 (1034)
T 3ixz_A 672 ACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750 (1034)
T ss_pred EEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHCCEEEEECCCCCH
T ss_conf 16771676663899999999873782699966989999999999976-99999987957769999978932980775679
Q ss_pred HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78730688732599128999999999999976765777764335889999874012599980189999999998777674
Q 001775 780 VAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGAL 859 (1015)
Q Consensus 780 ~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~inli~~~l~~l 859 (1015)
.+|++||+++.++++++++.++++||++|+||+|+++|++++|+..++..+++.++..+.|++++|+||+|+++|++|++
T Consensus 751 ~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~pal 830 (1034)
T 3ixz_A 751 AAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSV 830 (1034)
T ss_pred HHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99985499966688339999999988999999999999999999999999999998214668999999999998888888
Q ss_pred HCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHCC--------CCCCCC----C--C----
Q ss_conf 5056999700004999999-898765689999999-999999999999982100--------004899----9--8----
Q 001775 860 ALATEPPTDELMKRPPVGK-RGNFISNVMWRNILG-QSLYQFMVISLLQAKGKA--------IFWLDG----P--D---- 919 (1015)
Q Consensus 860 ~l~~e~p~~~~m~~~P~~~-~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~~~--------~~~~~~----~--~---- 919 (1015)
+|++|||++++|+|||+.+ +++++++.++...+. .++++++..++.++.... ++++.. . .
T Consensus 831 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 910 (1034)
T 3ixz_A 831 SLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQD 910 (1034)
T ss_pred HHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 85168897326647998975344557889999999999999999999999999636776200001112223344443101
Q ss_pred -------------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHH--HHHHHHHCC
Q ss_conf -------------1013446999999999999997760355422223-661359999999999999999--864542300
Q 001775 920 -------------STLVLNTLIFNSFVFCQIFNEISSREMEEINVFK-GILDNYVFASVLGVTVFFQII--IVEFLGTFA 983 (1015)
Q Consensus 920 -------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~~--~v~~~~~~~ 983 (1015)
.....+|++|+++|++|+||.+++|. ++.++|+ ++++|+++++++++++++|++ ++|+++.+|
T Consensus 911 ~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~-~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f 989 (1034)
T 3ixz_A 911 SYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKT-RRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIF 989 (1034)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 112111011100000257989999999999999983126-8876542677536899999999999999999826677775
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 457989778999999999999999986543
Q 001775 984 NTTPLTLTQWFASIVIGFIGMPIAAGLKTI 1013 (1015)
Q Consensus 984 ~~~~l~~~~w~~~~~~~~~~~~~~~~~K~i 1013 (1015)
++.|+++.+|+++++++++.++++++.|++
T Consensus 990 ~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~ 1019 (1034)
T 3ixz_A 990 NFMPIRFQWWLVPMPFGLLIFVYDEIRKLG 1019 (1034)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 678898999999999999999999999999
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=1193.45 Aligned_cols=875 Identities=27% Similarity=0.354 Sum_probs=736.0
Q ss_pred HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC
Q ss_conf 70599899988289957999904787999998229974599998429999999995556999999999999998861-59
Q 001775 115 FHGGVTGIAEKLSTSISDGLTSNTDLFNRRQEIYGLNQFAESTPRSFWVFVWEALQDMTLMILGACAFVSLIVGIVM-EG 193 (1015)
Q Consensus 115 ~~~~v~gl~~~l~t~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~~~~~~~~ill~~a~is~~~~~~~-~g 193 (1015)
+...+++++..|+++...||+.++ +.+|+++||+|.++.++.+++|+.++++|+++++++++++++++++.+... .+
T Consensus 49 ~~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 126 (1028)
T 2zxe_A 49 HKLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAAT 126 (1028)
T ss_dssp SSSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 549999999996869467989999--999998669997999999989999999997089999999999999998751134
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCEEEEEECCEEEEEECCCCCCCEEEEECCCCEEC
Q ss_conf 99984115899999999999876299999988----99988331697589998997999972565667099967998423
Q 001775 194 WPHGAHDGLGIVASILLVVFVTATSDYRQSLQ----FKDLDKEKKKIYVQVTRNGFRQKLSIYDLLPGDIVHLGIGDQVP 269 (1015)
Q Consensus 194 ~~~~~~d~~~i~~~illv~~v~a~~~~~~~~~----~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~i~~Gd~IP 269 (1015)
..+.+.+.....++++++++++++.++.|+++ .++|.+ ..+..++|+|||++++|++++|||||||.+++||+||
T Consensus 127 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IP 205 (1028)
T 2zxe_A 127 EDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIP 205 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEE
T ss_conf 566652007999898988889999999999999999999885-2787269998999999988897867779989979841
Q ss_pred CCEEEEEECCEEEECCCCCCCCCCEECCCCC---------CCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 4389994042348402367999821038999---------6100252565180999999990223276899861689999
Q 001775 270 ADGLFVSGFSVLIDESSLTGESEPVMVNEEN---------PFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGDD 340 (1015)
Q Consensus 270 ADgili~g~~l~VDES~LTGEs~pv~k~~~~---------~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 340 (1015)
|||++++|++|.||||+|||||.|+.|..++ +++|+||.+.+|.++++|++||.+|++|+|++++.+++.+
T Consensus 206 aD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 285 (1028)
T 2zxe_A 206 ADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVG 285 (1028)
T ss_dssp SEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCC
T ss_pred CEEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCC
T ss_conf 22899960858998675678876344346778888445335487374697016999999845143988999860378878
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98269999999999999999999999999999885402478864556752258899999999876664315625999999
Q 001775 341 ETPLQVKLNGVATIIGKGGLFFAVVTFAVLVQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVTL 420 (1015)
Q Consensus 341 ~t~lq~~l~~~a~~i~~~~l~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~~ 420 (1015)
++|+|+.+++++.++..+++.++++++++++. . +. .+...+.+++++++++|||+||+++|+
T Consensus 286 ~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~~~~~i~llv~~iP~~Lp~~vti 347 (1028)
T 2zxe_A 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEAVIFLIGIIVANVPEGLLATVTV 347 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHHHHHHHHHHHHHSCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-----CC----------CHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 89289999999999999999999999999997---3-----67----------699999999999999747417999999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999840654434603554207812784066574324852799999827111015778757557899948999999
Q 001775 421 SLAFAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLL 500 (1015)
Q Consensus 421 ~l~~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 500 (1015)
+++.++.+|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+..+..........++..+.+.
T Consensus 348 ~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 427 (1028)
T 2zxe_A 348 CLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALS 427 (1028)
T ss_dssp HHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999855891644456766414762995168888887738999999898465136777765544466778999999
Q ss_pred HHHHHCCCCEEEECCCC----CEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEEC---CCC
Q ss_conf 99984388527741799----60225890299999999973999266530163268817889995189999808---991
Q 001775 501 QSIFTNTGGEVVVNKDG----KREILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELP---GGG 573 (1015)
Q Consensus 501 ~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~---~~~ 573 (1015)
...++||++.++.+.++ .....|||+|.|+++++...+.+....+..+++++++||+|+||||+++++.+ +++
T Consensus 428 ~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~ 507 (1028)
T 2zxe_A 428 RIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507 (1028)
T ss_dssp HHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCC
T ss_pred HHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCC
T ss_conf 99986578765047777766453007894099999999995898889887482678704476666479999405788871
Q ss_pred EEEEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--------CCCCCCCC
Q ss_conf 8999738615774036322246991203899889999999999998002001033663268999--------99988775
Q 001775 574 LRAHSKGASEIVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFS--------PENPIPVS 645 (1015)
Q Consensus 574 ~~~~~KGa~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~--------~~~~~~~~ 645 (1015)
+.+++|||||.++++|+.+. .+|...+++++.++.+.+.+++++++|+|++++|||+++.+.. +..+..+.
T Consensus 508 ~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~ 586 (1028)
T 2zxe_A 508 YLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTT 586 (1028)
T ss_dssp EEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCS
T ss_pred EEEEEECCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 79999388289998745653-38972128889999999999999855997999998746822134201246245555543
Q ss_pred CEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC------------------------
Q ss_conf 42566564024989610699999998689879998689988999999991997799------------------------
Q 001775 646 GYTLIAIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDD------------------------ 701 (1015)
Q Consensus 646 ~l~llG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGd~~~ta~~ia~~~gi~~~~------------------------ 701 (1015)
|++|+|+++++||+||+++++|++|+++||+++|+|||+..+|.++|++|||...+
T Consensus 587 ~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 666 (1028)
T 2zxe_A 587 DLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAK 666 (1028)
T ss_dssp SEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 80998651157899844899999999869979998899779999999986988788336777776418632221555662
Q ss_pred CEEEECHHHCCCCHHHHHHHCCCE--EEEEECCHHCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCEEEECCCCCH
Q ss_conf 502306000025999998453650--699961920099999999642799899984898891233106900530578838
Q 001775 702 GIAIEGPVFREKTTEELMELIPKI--QVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 779 (1015)
Q Consensus 702 ~~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~~p~~K~~iv~~l~~~~g~~v~~vGDg~ND~~al~~Advgiamgi~g~~ 779 (1015)
..+++|+++..+.++++.+.+.+. .+|+|++|+||..+|+.+|+. |++|+|+|||.||+|||++||+|||||++|+|
T Consensus 667 ~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd 745 (1028)
T 2zxe_A 667 ACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745 (1028)
T ss_dssp EEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCH
T ss_pred EEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHCCCEEEECCCCCH
T ss_conf 69988088564799999999862796799985888999999999968-99899985885339999868911996776588
Q ss_pred HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 78730688732599128999999999999976765777764335889999874012599980189999999998777674
Q 001775 780 VAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGAL 859 (1015)
Q Consensus 780 ~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~inli~~~l~~l 859 (1015)
+++++||+++.+++|++|++++++||++|+||+|++.|++++|+..++..+++.++..+.|++++|++|+|+++|.+|++
T Consensus 746 ~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~ 825 (1028)
T 2zxe_A 746 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAI 825 (1028)
T ss_dssp HHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHH
T ss_pred HHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 89985489955798779999999999999999999999999999999999999997666445799999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHH-HHHHHHHHHHHHHHHHHH-----HC----------CCCCCCCC----
Q ss_conf 505699970000499999989-8765689999-999999999999999982-----10----------00048999----
Q 001775 860 ALATEPPTDELMKRPPVGKRG-NFISNVMWRN-ILGQSLYQFMVISLLQAK-----GK----------AIFWLDGP---- 918 (1015)
Q Consensus 860 ~l~~e~p~~~~m~~~P~~~~~-~~~~~~~~~~-i~~~~~~~~~~~~~l~~~-----~~----------~~~~~~~~---- 918 (1015)
+|++|+|++++|++||+.++. +++++.++.. ++..+++++++.++.++. +. .++.....
T Consensus 826 al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 905 (1028)
T 2zxe_A 826 SLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVED 905 (1028)
T ss_dssp HGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEEC
T ss_pred HHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCCCCCCC
T ss_conf 86028661456515999952134527999999999999999999999999987406766201310220010356542113
Q ss_pred ---C---------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--HHHHHHCCC
Q ss_conf ---8---------10134469999999999999977603554222236613599999999999999998--645423004
Q 001775 919 ---D---------STLVLNTLIFNSFVFCQIFNEISSREMEEINVFKGILDNYVFASVLGVTVFFQIII--VEFLGTFAN 984 (1015)
Q Consensus 919 ---~---------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~--v~~~~~~~~ 984 (1015)
. .....+|++|+++|++|+||.++||+ ++.++|+..++|++++.++++++++|+++ +|+++.+|+
T Consensus 906 ~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~ 984 (1028)
T 2zxe_A 906 SFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKT-RRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALR 984 (1028)
T ss_dssp TTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-SSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 455322234444566678899999999999999998746-8751101577688999999999999999998656776421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 57989778999999999999999986543
Q 001775 985 TTPLTLTQWFASIVIGFIGMPIAAGLKTI 1013 (1015)
Q Consensus 985 ~~~l~~~~w~~~~~~~~~~~~~~~~~K~i 1013 (1015)
+.|+++.+|+++++++++.++++++.|++
T Consensus 985 ~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 985 MYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013 (1028)
T ss_dssp CCCCCGGGGGTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88899999999999999999999999999
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=1170.71 Aligned_cols=884 Identities=30% Similarity=0.422 Sum_probs=736.6
Q ss_pred HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 70599899988289957999904787999998229974599998429999999995556999999999999998861599
Q 001775 115 FHGGVTGIAEKLSTSISDGLTSNTDLFNRRQEIYGLNQFAESTPRSFWVFVWEALQDMTLMILGACAFVSLIVGIVMEGW 194 (1015)
Q Consensus 115 ~~~~v~gl~~~l~t~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~~~~~~~~ill~~a~is~~~~~~~~g~ 194 (1015)
+...++++++.|+++...||+.++ +.+|+++||.|.++.++.+++|+.++++|+++.++++++++++++++++...+.
T Consensus 6 ~~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 6 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 548999999985899666989999--999997568873289889869999999998899999999999999988602566
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE--EEEEECCCCCCCEEEEECCCCEECC
Q ss_conf --998411589999999999987629999998899988331697589998997--9999725656670999679984234
Q 001775 195 --PHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIYVQVTRNGF--RQKLSIYDLLPGDIVHLGIGDQVPA 270 (1015)
Q Consensus 195 --~~~~~d~~~i~~~illv~~v~a~~~~~~~~~~~~l~~~~~~~~v~V~R~G~--~~~I~~~dLvvGDIV~i~~Gd~IPA 270 (1015)
...|+|++.+++.+++...+..+.+++.+++.++|.+ ..+..++|+|||+ .++|+++||||||+|.+++||+|||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCC
T ss_conf 540347876886678899999999999999999999871-0897389993798647997899987787899889784354
Q ss_pred CEEEEEE--CCEEEECCCCCCCCCCEECCCCC------------CCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 3899940--42348402367999821038999------------610025256518099999999022327689986168
Q 001775 271 DGLFVSG--FSVLIDESSLTGESEPVMVNEEN------------PFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSE 336 (1015)
Q Consensus 271 Dgili~g--~~l~VDES~LTGEs~pv~k~~~~------------~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 336 (1015)
||+++++ .+|.||||+|||||.|+.|..+. +++|+||.+.+|.++++|++||.+|++|+|++++.+
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred CEEEEEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 48999885043999825246887633400456677666755545467618789844589999976722198999997325
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99999826999999999999999999999999999988540247886455675225889999999987666431562599
Q 001775 337 GGDDETPLQVKLNGVATIIGKGGLFFAVVTFAVLVQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPL 416 (1015)
Q Consensus 337 ~~~~~t~lq~~l~~~a~~i~~~~l~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~l 416 (1015)
++.+++|+|+++++++.++.++++.+++++++++...+ .....+. .| ...+..+|..++++++++|||+||+
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~----~~~~~~~~~~ai~l~v~aiP~~Lp~ 314 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGG--SW----IRGAIYYFKIAVALAVAAIPEGLPA 314 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG--GSCSSSS--CH----HHHHHHHHHHHHHHHHHHSCTTHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCC--HH----HHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 78789938999999999999999999999999999874--1433464--07----9999999999999999866760489
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEE---------CCCCCCCCC-
Q ss_conf 9999999999998406544346035542078127840665743248527999998271110---------157787575-
Q 001775 417 AVTLSLAFAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKE---------VSKTDSASS- 486 (1015)
Q Consensus 417 av~~~l~~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~---------~~~~~~~~~- 486 (1015)
++|++++.++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..++ .+.......
T Consensus 315 ~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 394 (995)
T 3ar4_A 315 VITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEG 394 (995)
T ss_dssp HHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCC
T ss_pred HHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 99999999999844178486134155550383399765888766585699999834755676554302540477768863
Q ss_pred -C------CCCCCHHHHHHHHHHHHHCCCCEEEECC-CCCEEECCCCHHHHHHHHHHHCCC-CH--H-------------
Q ss_conf -5------7899948999999999843885277417-996022589029999999997399-92--6-------------
Q 001775 487 -L------CSEIPDSAVQLLLQSIFTNTGGEVVVNK-DGKREILGTPTETALLEFGLSLGG-DF--Q------------- 542 (1015)
Q Consensus 487 -~------~~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~a~~~~~-~~--~------------- 542 (1015)
. ......+....+....+.|+++.+..++ ++.....|+|+|.|++.++.+.+. +. .
T Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~ 474 (995)
T 3ar4_A 395 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNS 474 (995)
T ss_dssp CEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 10136643444455899999999987488805656889832554796479999999983996410001342010121015
Q ss_pred HHHHCCCEEEEECCCCCCCEEEEEEEECCC-----CEEEEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHH
Q ss_conf 653016326881788999518999980899-----189997386157740363222469912038998899999999999
Q 001775 543 AERQTSKIVKVEPFNSSKKRMGVVLELPGG-----GLRAHSKGASEIVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQF 617 (1015)
Q Consensus 543 ~~~~~~~i~~~~pF~s~~k~m~viv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 617 (1015)
..+..+++++++||+|+||||+++++.+++ ++.+++|||||.++++|+.+.. ++...|++++.++.+.+.++++
T Consensus 475 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 553 (995)
T 3ar4_A 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEW 553 (995)
T ss_dssp HHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHC-CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 566417457774048888756999834898766644499975887999985405442-8973249999999999999987
Q ss_pred --HHHCCCEEEEEEEECCCCCCC---C----CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf --980020010336632689999---9----9887754256656402498961069999999868987999868998899
Q 001775 618 --ANEALRTLCLAFMELETGFSP---E----NPIPVSGYTLIAIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTA 688 (1015)
Q Consensus 618 --a~~glr~l~~A~~~~~~~~~~---~----~~~~~~~l~llG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGd~~~ta 688 (1015)
+++|+|++++|||+++..... . ....|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..+|
T Consensus 554 ~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta 633 (995)
T 3ar4_A 554 GTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTA 633 (995)
T ss_dssp HHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred HHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
T ss_conf 76305614889999834765111222340244553069489999852588966699999999986998999899978999
Q ss_pred HHHHHHCCCCCCC----CEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHHHHHHHHHHHCCCEEEEECCCCCCHHHH
Q ss_conf 9999991997799----502306000025999998453650699961920099999999642799899984898891233
Q 001775 689 KAIARECGILTDD----GIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPAL 764 (1015)
Q Consensus 689 ~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~~g~~v~~vGDg~ND~~al 764 (1015)
.++|+++||...+ +.+++|++++.+.++++.+.+.+..+|+|++|+||..+|+.+|++ |++|+|+|||.||+|||
T Consensus 634 ~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 634 IAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPAL 712 (995)
T ss_dssp HHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHH
T ss_conf 99999839677887535348983664628999999987537389970899999999999977-99799983881449999
Q ss_pred HCCCCEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 10690053057883878730688732599128999999999999976765777764335889999874012599980189
Q 001775 765 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGSAPLTAV 844 (1015)
Q Consensus 765 ~~Advgiamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~ 844 (1015)
++||+||||| +|+++++++||+++.+|+|.++++++++||++|+||+|++.|++++|+..++..+++.++..+.||+++
T Consensus 713 k~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~ 791 (995)
T 3ar4_A 713 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPV 791 (995)
T ss_dssp HHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHH
T ss_pred HHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 8789679967-889999973889977787789999999989999999999999999999999999999998476257899
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HCCC--------CCC
Q ss_conf 9999999987776745056999700004999999898765689999999999999999999982-1000--------048
Q 001775 845 QLLWVNMIMDTLGALALATEPPTDELMKRPPVGKRGNFISNVMWRNILGQSLYQFMVISLLQAK-GKAI--------FWL 915 (1015)
Q Consensus 845 qll~inli~~~l~~l~l~~e~p~~~~m~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-~~~~--------~~~ 915 (1015)
|++|+|+++|.+|+++|++|||++++|++||+.++++++++.++..++.++++++.+.+..++. .... ..+
T Consensus 792 qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (995)
T 3ar4_A 792 QLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQL 871 (995)
T ss_dssp HHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 99999999988777763067777568737999976454489999999999999999999999999985156654330000
Q ss_pred ------CC--C-------C--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHHHH--HH
Q ss_conf ------99--9-------8--1013446999999999999997760355422223-66135999999999999999--98
Q 001775 916 ------DG--P-------D--STLVLNTLIFNSFVFCQIFNEISSREMEEINVFK-GILDNYVFASVLGVTVFFQI--II 975 (1015)
Q Consensus 916 ------~~--~-------~--~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~f~-~~~~n~~~~~~~~~~~~~~~--~~ 975 (1015)
.+ . . .....+|++|+++|++|+||.++||+.+. ++|+ ++++|++++.++++++++|+ ++
T Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~-~~~~~~~~~n~~l~~~~~~~~~l~~~~~~ 950 (995)
T 3ar4_A 872 THFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ-SLMRMPPWVNIWLLGSICLSMSLHFLILY 950 (995)
T ss_dssp GGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSC-CTTTSCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 01122344433334332210010135659999999999999998602554-31005775479999999999999999998
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 64542300457989778999999999999999986543
Q 001775 976 VEFLGTFANTTPLTLTQWFASIVIGFIGMPIAAGLKTI 1013 (1015)
Q Consensus 976 v~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~~~~~K~i 1013 (1015)
+++++.+|++.|+++.+|+++++++++.++++++.|++
T Consensus 951 ~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 988 (995)
T 3ar4_A 951 VDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988 (995)
T ss_dssp STHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88777761157899999999999999999999999999
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1067.96 Aligned_cols=795 Identities=21% Similarity=0.324 Sum_probs=649.5
Q ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 99882899579999047879999982299745999984299999999955569999999999999988615999984115
Q 001775 122 IAEKLSTSISDGLTSNTDLFNRRQEIYGLNQFAESTPRSFWVFVWEALQDMTLMILGACAFVSLIVGIVMEGWPHGAHDG 201 (1015)
Q Consensus 122 l~~~l~t~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~~~~~~~~ill~~a~is~~~~~~~~g~~~~~~d~ 201 (1015)
++..|+++...||+.++ +.+|+++||+|.++.++ .++|..++++|+++..++++++++++++++ .|.|+
T Consensus 76 ~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g--------~~~~~ 144 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE--------DWVDF 144 (920)
T ss_dssp SSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS--------CSSHH
T ss_pred HHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHH
T ss_conf 89985899579999999--99999963998158888-889999999998799999999999999997--------68999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCEEEEECCCCEECCCEEEEEECC-E
Q ss_conf 899999999999876299999988999883316975899989979999725656670999679984234389994042-3
Q 001775 202 LGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIYVQVTRNGFRQKLSIYDLLPGDIVHLGIGDQVPADGLFVSGFS-V 280 (1015)
Q Consensus 202 ~~i~~~illv~~v~a~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~i~~Gd~IPADgili~g~~-l 280 (1015)
..+++.+++..++..+.+++.++..++|.+ ..+..++|+|||++++|++++|||||+|.+++||+|||||++++|++ +
T Consensus 145 ~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~-l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l 223 (920)
T 1mhs_A 145 GVICGLLLLNAVVGFVQEFQAGSIVDELKK-TLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFL 223 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCCEE
T ss_conf 999999999999999999999999998633-5998799998998999898995889789967797336656999457223
Q ss_pred EEECCCCCCCCCCEECCCCCCCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 48402367999821038999610025256518099999999022327689986168999998269999999999999999
Q 001775 281 LIDESSLTGESEPVMVNEENPFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKGGL 360 (1015)
Q Consensus 281 ~VDES~LTGEs~pv~k~~~~~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~a~~i~~~~l 360 (1015)
.||||+|||||.|+.|..++ .+|+||.+.+|.++++|++||.+|++|++.+++++++.+++|+|+.+++++.++..+.+
T Consensus 224 ~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~ 302 (920)
T 1mhs_A 224 QVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVI 302 (920)
T ss_dssp EEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCEEECCCC-EEECCCEEECCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 20222247888646934798-63037669513599999995776788899887764246776499999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 99999999999988540247886455675225889999999987666431562599999999999999840654434603
Q 001775 361 FFAVVTFAVLVQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 440 (1015)
Q Consensus 361 ~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~~~l~~~~~~l~~~~ilvk~~~ 440 (1015)
.+++++|+.+ ++ .+ . .+...+..++++++++|||+||+++|++++.++.+|.++|+++|+++
T Consensus 303 ~~~~i~~~~~---~~-----~~-------~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~ 364 (920)
T 1mhs_A 303 FTLLIVWVSS---FY-----RS-------N---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLS 364 (920)
T ss_dssp HHHHHHHHTT---TT-----TT-------C---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred HHHHHHHHHH---HH-----CC-------C---CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCC
T ss_conf 9999999998---84-----68-------8---69999999999998767603777789999999999986883870571
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEE
Q ss_conf 55420781278406657432485279999982711101577875755789994899999999984388527741799602
Q 001775 441 ACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLLQSIFTNTGGEVVVNKDGKRE 520 (1015)
Q Consensus 441 ~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 520 (1015)
++|+||++++||||||||||+|+|+|.+++..+... ++ +++ .+.++|+... .
T Consensus 365 aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~---------------~~---~ll-~~a~l~~~~~----~----- 416 (920)
T 1mhs_A 365 AIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVD---------------PE---DLM-LTACLAASRK----K----- 416 (920)
T ss_dssp THHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCC---------------CT---HHH-HHHHHSCCCS----S-----
T ss_pred HHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCC---------------HH---HHH-HHHHHHCCCC----C-----
T ss_conf 355543676899778887555531699985069989---------------89---999-9999854776----6-----
Q ss_pred ECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCEE
Q ss_conf 25890299999999973999266530163268817889995189999808991899973861577403632224699120
Q 001775 521 ILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPGGGLRAHSKGASEIVLSGCDKVVNSTGEVV 600 (1015)
Q Consensus 521 ~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~ 600 (1015)
..+||+|.|+++++.+.+.. ......+++++.+||+|.+|+|+++++.++++...++||+||.++++|+. ..
T Consensus 417 ~~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~ 488 (920)
T 1mhs_A 417 KGIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DH 488 (920)
T ss_dssp CSCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SS
T ss_pred CCCCHHHHHHHHHHHHCCCC-HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCC-------CC
T ss_conf 68985899999999964631-01013553357861167788599999967991899990879999986135-------67
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEE
Q ss_conf 38998899999999999980020010336632689999998877542566564024989610699999998689879998
Q 001775 601 PLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKDPVRPGVKESVAVCRSAGITVRMV 680 (1015)
Q Consensus 601 ~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~ 680 (1015)
+++++.++.+.+.+++++++|+|++++||+. .+.+++++|+++++||+||+++++|++|+++||+++|+
T Consensus 489 ~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~Mi 557 (920)
T 1mhs_A 489 PIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKML 557 (920)
T ss_dssp CCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC-----------CCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 8987889989999999986799799999832-----------66530788999973432101799999986257449998
Q ss_pred CCCCHHHHHHHHHHCCCCC----CCCEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHHHHHHHHHHHCCCEEEEECC
Q ss_conf 6899889999999919977----995023060000259999984536506999619200999999996427998999848
Q 001775 681 TGDNINTAKAIARECGILT----DDGIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGD 756 (1015)
Q Consensus 681 TGd~~~ta~~ia~~~gi~~----~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~~g~~v~~vGD 756 (1015)
|||+..||.++|+++||.. .+..+++|. +.++++++.+.+.+..+|+|++|+||..+|+.+|++ |++|+|+||
T Consensus 558 TGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GD 634 (920)
T 1mhs_A 558 TGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGD 634 (920)
T ss_dssp ESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCCCEECCC
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCCCHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHC-CCEEEEECC
T ss_conf 38978999999998499965467541242276--558989999877518199983799999999999967-996999828
Q ss_pred CCCCHHHHHCCCCEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 98891233106900530578838787306887325991289999999999999767657777643358899998740125
Q 001775 757 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLT 836 (1015)
Q Consensus 757 g~ND~~al~~Advgiamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~ 836 (1015)
|.||+|||++||+||||| +|+++++++||+++.+|+|++|++++++||++|+||+|++.|+++.|+....+..+...+.
T Consensus 635 GvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~ 713 (920)
T 1mhs_A 635 GVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL 713 (920)
T ss_dssp CGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHCCCCCCCC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 810099998578674056-4339999846807767977789999999999999999987889799999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99980189999999998777674505699970000499999989876568999999999999999999998210000489
Q 001775 837 GSAPLTAVQLLWVNMIMDTLGALALATEPPTDELMKRPPVGKRGNFISNVMWRNILGQSLYQFMVISLLQAKGKAIFWLD 916 (1015)
Q Consensus 837 ~~~pl~~~qll~inli~~~l~~l~l~~e~p~~~~m~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~ 916 (1015)
+. |+++.|++|+|+++|. |+++|++|+++.+ ++|+.++.+-+- ..++..+++.+...+..++.... ++..
T Consensus 714 ~~-~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~-~~~~ 783 (920)
T 1mhs_A 714 NR-SLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPKLW----GMSVLLGVVLAVGTWITVTTMYA-QGEN 783 (920)
T ss_dssp SC-CCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSSCS----SCHHHHHHHHHHHHHHHHHHHTT-TTTT
T ss_pred HC-CCCHHHHHHHHHHHHH-HHHHHCCCCCCCC---CCCCCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH-HCCC
T ss_conf 61-6879999999999877-7665135676434---588784089899----99999999999999999999998-3545
Q ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 99--8101344699999999999999776035542222366135999999999999999986454230045798977899
Q 001775 917 GP--DSTLVLNTLIFNSFVFCQIFNEISSREMEEINVFKGILDNYVFASVLGVTVFFQIIIVEFLGTFANTTPLTLTQWF 994 (1015)
Q Consensus 917 ~~--~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~w~ 994 (1015)
+. ......+|++|++++++|+|+.+++|..+. +|++. .|+++++++++..++++.+. +.+ +|.+.|++|.+|+
T Consensus 784 ~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~f~~~~l~~~~~~ 858 (920)
T 1mhs_A 784 GGIVQNFGNMDEVLFLQISLTENWLIFITRANGP--FWSSI-PSWQLSGAIFLVDILATCFT-IWG-WFEHSDTSIVAVV 858 (920)
T ss_dssp CCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSS--CSCCS-CTHHHHHHHHHHHHHHHHHH-SSS-STTSCSHHHHTHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHCCC-HHHHHHHHHHHHHHHHHHHH-HHH-HHCCCCCCHHHHH
T ss_conf 6533206678999999999999999998503605--40375-59999999999999999999-765-6316788999999
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999986543
Q 001775 995 ASIVIGFIGMPIAAGLKTI 1013 (1015)
Q Consensus 995 ~~~~~~~~~~~~~~~~K~i 1013 (1015)
++++++++.+++.++.|++
T Consensus 859 ~~~~~~~~~~~~~e~~k~~ 877 (920)
T 1mhs_A 859 RIWIFSFGIFCIMGGVYYI 877 (920)
T ss_dssp HHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1044.33 Aligned_cols=812 Identities=20% Similarity=0.277 Sum_probs=625.3
Q ss_pred CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 59989998828995799990478799999822997459999842999999999555699999999999999886159999
Q 001775 117 GGVTGIAEKLSTSISDGLTSNTDLFNRRQEIYGLNQFAESTPRSFWVFVWEALQDMTLMILGACAFVSLIVGIVMEGWPH 196 (1015)
Q Consensus 117 ~~v~gl~~~l~t~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~~~~~~~~ill~~a~is~~~~~~~~g~~~ 196 (1015)
..+++++..|+++ ..||+.++ +.+|+++||+|.++.++ +++|+.++++|++++.++++++++++++++.. .+.+.
T Consensus 17 ~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~-~~~~~ 91 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANG-DGRPP 91 (885)
T ss_dssp SSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC-TTSCS
T ss_pred CCHHHHHHHHCCC-CCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCC
T ss_conf 9999999983899-99989999--99999851997158878-87999999999999999999999999999704-56630
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCEEEEECCCCEECCCEEEEE
Q ss_conf 84115899999999999876299999988999883316975899989979999725656670999679984234389994
Q 001775 197 GAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIYVQVTRNGFRQKLSIYDLLPGDIVHLGIGDQVPADGLFVS 276 (1015)
Q Consensus 197 ~~~d~~~i~~~illv~~v~a~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~i~~Gd~IPADgili~ 276 (1015)
.|+|++.+++.+++...+..+.+++.+++.++|.+ ..+..++|+|||++++|++++|||||+|.+++||+|||||++++
T Consensus 92 ~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~ 170 (885)
T 3b8c_A 92 DWQDFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLE 170 (885)
T ss_dssp CCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEE
T ss_conf 18899999999999999999999999999999733-49986999999989998989979897899889999930359997
Q ss_pred ECCEEEECCCCCCCCCCEECCCCCCCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 04234840236799982103899961002525651809999999902232768998616899999826999999999999
Q 001775 277 GFSVLIDESSLTGESEPVMVNEENPFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 356 (1015)
Q Consensus 277 g~~l~VDES~LTGEs~pv~k~~~~~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~a~~i~ 356 (1015)
|+++.||||+|||||.|+.|..++ .+|+||.+.+|.++++|++||.+|++|++.+++++ ..+++|+|+.+++++.++.
T Consensus 171 g~~l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 171 GDPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SSCBCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCC-CCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHH
T ss_conf 675400344468888645834898-30267599511799999975730199999999864-6446849999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9-999999999999999885402478864556752258899999999876664315625999999999999998406544
Q 001775 357 K-GGLFFAVVTFAVLVQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKAL 435 (1015)
Q Consensus 357 ~-~~l~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~~~l~~~~~~l~~~~il 435 (1015)
. +++.+++++++.|. . .+. .+.+.+..++++++++|||+||++++++++.++.+|.++|++
T Consensus 249 ~~~~~~~~~~~~~~~~----~----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~il 310 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMYP----I----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 310 (885)
T ss_dssp HHHHHHHHHHSTTTTT----T----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHHH----H----CCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 9999999999999999----8----068----------699999999999999703689999999999999999719869
Q ss_pred CCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 34603554207812784066574324852799999827111015778757557899948999999999843885277417
Q 001775 436 VRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLLQSIFTNTGGEVVVNK 515 (1015)
Q Consensus 436 vk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 515 (1015)
+|+++++|+||++|+||||||||||+|+|+|.+.+.. .+. ...+ ..+++..+.+++ ..
T Consensus 311 vk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----------~~~~--~~~ll~~aa~~~-~~------ 368 (885)
T 3b8c_A 311 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----------KGVE--KDQVLLFAAMAS-RV------ 368 (885)
T ss_dssp CSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSC-----------SSTT--HHHHHHHHHHHC-CS------
T ss_pred ECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEE--CCC-----------CCCC--HHHHHHHHHHHH-CC------
T ss_conf 6895188897679989987998761685279987775--158-----------9999--999999999972-78------
Q ss_pred CCCEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCC
Q ss_conf 99602258902999999999739992665301632688178899951899998089918999738615774036322246
Q 001775 516 DGKREILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPGGGLRAHSKGASEIVLSGCDKVVNS 595 (1015)
Q Consensus 516 ~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~~~~KGa~e~il~~c~~~~~~ 595 (1015)
..+||+|.|+++++.+ ....+..++.++.+||+|.+|+|+++++..+++...++||+||.++++|+.
T Consensus 369 -----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~---- 435 (885)
T 3b8c_A 369 -----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA---- 435 (885)
T ss_dssp -----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC----
T ss_pred -----CCCCCHHHHHHHHHHC----HHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCC----
T ss_conf -----8999158999998646----365762483220135785225689999804896899994889999976458----
Q ss_pred CCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf 99120389988999999999999800200103366326899999988775425665640249896106999999986898
Q 001775 596 TGEVVPLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKDPVRPGVKESVAVCRSAGI 675 (1015)
Q Consensus 596 ~g~~~~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D~lr~~~~~~I~~l~~aGi 675 (1015)
+++.++.+.+.+++++++|+|++++||++++.+. .+..++|++++|+++++||+||+++++|++|+++||
T Consensus 436 -------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI 505 (885)
T 3b8c_A 436 -------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGV 505 (885)
T ss_dssp -------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTC
T ss_pred -------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC---CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
T ss_conf -------6445799999999998579869999994466433---111356757999999606661208999999997699
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCC--CCEEEECHHHCC-CCHHHHHHHCCCEEEEEECCHHCHHHHHHHHHHHCCCEEE
Q ss_conf 7999868998899999999199779--950230600002-5999998453650699961920099999999642799899
Q 001775 676 TVRMVTGDNINTAKAIARECGILTD--DGIAIEGPVFRE-KTTEELMELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVA 752 (1015)
Q Consensus 676 ~v~m~TGd~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~-~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~~g~~v~ 752 (1015)
+++|+|||+..+|.++|+++||... ...++.|.+++. ++++++++.+.+..+|+|++|+||..+|+.+|++ |++|+
T Consensus 506 ~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Va 584 (885)
T 3b8c_A 506 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVG 584 (885)
T ss_dssp CCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEE
T ss_conf 68999399869999999980976466775144555312224635799998638689887899999999999977-99699
Q ss_pred EECCCCCCHHHHHCCCCEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98489889123310690053057883878730688732599128999999999999976765777764335889999874
Q 001775 753 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSS 832 (1015)
Q Consensus 753 ~vGDg~ND~~al~~Advgiamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~ 832 (1015)
|+|||.||+|||++||+||||| +|+|+++++||+++.+|+|++|++++++||++|+||+|++.|++++|+..++..+..
T Consensus 585 m~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~ 663 (885)
T 3b8c_A 585 MTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663 (885)
T ss_dssp BCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHH
T ss_pred EECCCCHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9759812299998699759957-712999984340133576668999999999999999999999999999999999999
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf 0125999801899999999987776745056999700004999999898765689999999999999999999982100-
Q 001775 833 ACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPTDELMKRPPVGKRGNFISNVMWRNILGQSLYQFMVISLLQAKGKA- 911 (1015)
Q Consensus 833 ~~~~~~~pl~~~qll~inli~~~l~~l~l~~e~p~~~~m~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~- 911 (1015)
.+ ..+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.++...+..++++++..+.+++.+..
T Consensus 664 ~~-~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 734 (885)
T 3b8c_A 664 AL-IWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKT 734 (885)
T ss_dssp HS-SCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTT
T ss_pred HH-CCCCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCC---CCC---CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97-0386758899999999987778-74046546754---587---30358-9999999999999999999999999973
Q ss_pred -----CCCCCCCC-CHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf -----00489998-101344-69999999999999977603554222236613599999999999999998645423004
Q 001775 912 -----IFWLDGPD-STLVLN-TLIFNSFVFCQIFNEISSREMEEINVFKGILDNYVFASVLGVTVFFQIIIVEFLGTFAN 984 (1015)
Q Consensus 912 -----~~~~~~~~-~~~~~~-t~~f~~~v~~~~~~~~~~r~~~~~~~f~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~~~ 984 (1015)
.++.+... .....+ +++|.+++++|+ +.+++|+. +..+|+.+ .|++++.+++..++++++.+.....+++
T Consensus 735 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (885)
T 3b8c_A 735 DFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSR-SWSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAK 811 (885)
T ss_dssp TTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSC-TTTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCCC-CCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 765223575411022999999999999999999-99976458-88701186-4999999999999999999860221031
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 57989778999999999999999986543
Q 001775 985 TTPLTLTQWFASIVIGFIGMPIAAGLKTI 1013 (1015)
Q Consensus 985 ~~~l~~~~w~~~~~~~~~~~~~~~~~K~i 1013 (1015)
+.|++|.+|+++++++++.+++.++.|++
T Consensus 812 ~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 840 (885)
T 3b8c_A 812 IRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840 (885)
T ss_dssp CCCCTTTTHHHHHHHTGGGTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37760999999999999999999999999
No 6
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=757.29 Aligned_cols=673 Identities=24% Similarity=0.293 Sum_probs=507.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCHHH
Q ss_conf 00005899999755367777787754244443115899988888411112674238656521004678578987059989
Q 001775 42 ANLSKRYEAAAMRKTNQEKLRIAVLVSKAAIQFLLGVTPSDYNVPEEVKAAGFQVCAEELGSITEGHDVKKLKFHGGVTG 121 (1015)
Q Consensus 42 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~g 121 (1015)
..|..+.|+.+.+.++++.+++|+.+.++.+.|.+.. ....++.+.+++.||.+.+.+.....+.++.+.+.++..++.
T Consensus 14 a~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~-~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (723)
T 3j09_A 14 AMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKR-IDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYVAA 92 (723)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTT-CCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSSTT
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC-CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6899999999845999538999757877999847886-899999999984387654321111011688999999999999
Q ss_pred HHH----HHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC----CCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHH
Q ss_conf 998----82899579999047879999982299745999----98429999999995556999------99999999999
Q 001775 122 IAE----KLSTSISDGLTSNTDLFNRRQEIYGLNQFAES----TPRSFWVFVWEALQDMTLMI------LGACAFVSLIV 187 (1015)
Q Consensus 122 l~~----~l~t~~~~Gl~~~~~~~~~r~~~~g~N~~~~~----~~~~f~~~~~~~~~~~~~~i------ll~~a~is~~~ 187 (1015)
++. .+.. .+..+. ..|....+..+ .+.+|++..|+++++....+ ...+|++..++
T Consensus 93 ~~~~~~~~~~~---~~~~~~--------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~ 161 (723)
T 3j09_A 93 FAGVLLLFLAH---FISLPY--------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVL 161 (723)
T ss_dssp TTHHHHHHHTT---SSCSSS--------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---HHCCCH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999---740323--------7899999999999996899999999999818898299999999999999999
Q ss_pred HHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHCCCEEEEEECCEEEEEECCCCCCCEE
Q ss_conf 88615-999984115899999999999876299999988999-------8833169758999899799997256566709
Q 001775 188 GIVME-GWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKD-------LDKEKKKIYVQVTRNGFRQKLSIYDLLPGDI 259 (1015)
Q Consensus 188 ~~~~~-g~~~~~~d~~~i~~~illv~~v~a~~~~~~~~~~~~-------l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDI 259 (1015)
..... +.+..|||+.++++.++++ +++.+.+++++ +.+ ..+..++|+|||++++|++++|+|||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~~~~i~~l~~-l~~~~a~v~r~g~~~~i~~~~l~~GDi 234 (723)
T 3j09_A 162 STAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDI 234 (723)
T ss_dssp HHHTTTTCCCCCCTTHHHHHHHHHH------HHHHHHHHHTTCCCTTHHHHH-TSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECCEEEEEEHHHCCCCCE
T ss_conf 9985146632399999999999999------999999999999999988872-699756999899899989899799989
Q ss_pred EEECCCCEECCCEEEEEECCEEEECCCCCCCCCCEECCCCCCCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCC
Q ss_conf 99679984234389994042348402367999821038999610025256518099999999022327689986168999
Q 001775 260 VHLGIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVNEENPFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGD 339 (1015)
Q Consensus 260 V~i~~Gd~IPADgili~g~~l~VDES~LTGEs~pv~k~~~~~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 339 (1015)
|.+++||+|||||++++|++ .||||+|||||.|+.|..++. +++||.+.+|.++++|+++|.+|.++++.+++++++.
T Consensus 235 v~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~ 312 (723)
T 3j09_A 235 VIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMG 312 (723)
T ss_dssp EEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCC
T ss_pred EEECCCCEEEEEEEEEECCE-EEECCCCCCCCCCEEECCCCE-ECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 99889998856799997776-886000138876466368982-3041697067299999984674399999999997534
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 99826999999999999999999999999999988540247886455675225889999999987666431562599999
Q 001775 340 DETPLQVKLNGVATIIGKGGLFFAVVTFAVLVQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVT 419 (1015)
Q Consensus 340 ~~t~lq~~l~~~a~~i~~~~l~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~ 419 (1015)
+++|+|+..|+++.++.++.+.++++++++|... .+. .+...+..++++++++|||+|++++|
T Consensus 313 ~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~la~p 375 (723)
T 3j09_A 313 SKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGLATP 375 (723)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------TTC----------TTCCSHHHHHHHHHHHSCTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCC----------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6983899999999999999999999999999985-------688----------69999999999997502678999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99999999984065443460355420781278406657432485279999982711101577875755789994899999
Q 001775 420 LSLAFAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLL 499 (1015)
Q Consensus 420 ~~l~~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 499 (1015)
+++..++.++.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. ..+.+
T Consensus 376 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~-------------------~~~~l 436 (723)
T 3j09_A 376 TALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------ERELL 436 (723)
T ss_dssp HHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC-------------------HHHHH
T ss_pred HHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC-------------------HHHHH
T ss_conf 99999999999889389482899876249899984777552696279999807999-------------------89999
Q ss_pred HHHHHHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEE--EE
Q ss_conf 9999843885277417996022589029999999997399926653016326881788999518999980899189--99
Q 001775 500 LQSIFTNTGGEVVVNKDGKREILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPGGGLR--AH 577 (1015)
Q Consensus 500 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~--~~ 577 (1015)
..+.... ..+.||++.|+++++...+...... .+|.+ .++.+.. .+
T Consensus 437 ~~aa~~e-------------~~s~hP~~~Ai~~~a~~~~~~~~~~---------~~~~~----------~~g~g~~~~~~ 484 (723)
T 3j09_A 437 RLAAIAE-------------RRSEHPIAEAIVKKALEHGIELGEP---------EKVEV----------IAGEGVVADGI 484 (723)
T ss_dssp HHHHHHH-------------TTCCSHHHHHHHHHHHHTTCCCCSC---------CCCEE----------ETTTEEEETTE
T ss_pred HHHHHHH-------------CCCCCCHHHHHHHHHHHCCCCCCCC---------CCEEE----------ECCCCEEEEEE
T ss_conf 9999985-------------0499954289999998549985786---------44599----------66981699999
Q ss_pred ECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 73861577403632224699120389988999999999999800200103366326899999988775425665640249
Q 001775 578 SKGASEIVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKD 657 (1015)
Q Consensus 578 ~KGa~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D 657 (1015)
.+|+++.+.+. +. +.. +.+.+..++++.+|+|++++|+ |++++|+++++|
T Consensus 485 ~~g~~~~~~~~--------~~--~~~----~~~~~~~~~~~~~g~~~~~va~----------------~~~~~G~i~i~D 534 (723)
T 3j09_A 485 LVGNKRLMEDF--------GV--AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSD 534 (723)
T ss_dssp EEECHHHHHHT--------TC--CCC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEEEEC
T ss_pred EECCHHHHHHC--------CC--CCC----HHHHHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEECC
T ss_conf 97789999754--------99--860----8999999999855982899978----------------999999996068
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHH
Q ss_conf 89610699999998689879998689988999999991997799502306000025999998453650699961920099
Q 001775 658 PVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKH 737 (1015)
Q Consensus 658 ~lr~~~~~~I~~l~~aGi~v~m~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 737 (1015)
++||+++++|++|+++|++++|+|||+..++.++|+++|+.. ++++++|+||.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~~K~ 587 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKS 587 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCE---------------------------EECCCCHHHHH
T ss_conf 752569999999997799799999989899999999859938---------------------------99268999999
Q ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999964279989998489889123310690053057883878730688732599128999999999999976765777
Q 001775 738 TLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQF 817 (1015)
Q Consensus 738 ~iv~~l~~~~g~~v~~vGDg~ND~~al~~Advgiamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~ 817 (1015)
..++.+++. +.|+|+|||.||+|||++||+||||| +|+|.++++||+++.+++++++.+++++||++++||++|+.|
T Consensus 588 ~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~ 664 (723)
T 3j09_A 588 EEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFW 664 (723)
T ss_dssp HHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998349--93999989823099995499879967-875999986999996799889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCC-C--CCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 7643358899998740125-9--99801899999999987776745056
Q 001775 818 QLTVNIVALIVNFSSACLT-G--SAPLTAVQLLWVNMIMDTLGALALAT 863 (1015)
Q Consensus 818 ~l~~ni~~i~~~~~~~~~~-~--~~pl~~~qll~inli~~~l~~l~l~~ 863 (1015)
+++||++++++++.+.... | -.|.-+.-....+-+.-.+-++-|..
T Consensus 665 a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~ 713 (723)
T 3j09_A 665 ALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRN 713 (723)
T ss_dssp HHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
T ss_conf 9999999999999756540155148899999981548999997787526
No 7
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=746.95 Aligned_cols=576 Identities=26% Similarity=0.356 Sum_probs=465.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHH-----------CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 998429999999995556999999999------999998861-----------599998411589999999999987629
Q 001775 156 STPRSFWVFVWEALQDMTLMILGACAF------VSLIVGIVM-----------EGWPHGAHDGLGIVASILLVVFVTATS 218 (1015)
Q Consensus 156 ~~~~~f~~~~~~~~~~~~~~ill~~a~------is~~~~~~~-----------~g~~~~~~d~~~i~~~illv~~v~a~~ 218 (1015)
..+.+||+..|+++++....+..+.++ +.+++.+.. .|..+.|||++++++.++++ +
T Consensus 128 ~~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~ll------g 201 (736)
T 3rfu_A 128 WGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLL------G 201 (736)
T ss_dssp TTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------H
T ss_conf 9538999999999985589759999999999999999998631004420013567643089999999999999------9
Q ss_pred HHHHHHHHH-------HHHHHHCCCEEEEEE-CCEEEEEECCCCCCCEEEEECCCCEECCCEEEEEECCEEEECCCCCCC
Q ss_conf 999998899-------988331697589998-997999972565667099967998423438999404234840236799
Q 001775 219 DYRQSLQFK-------DLDKEKKKIYVQVTR-NGFRQKLSIYDLLPGDIVHLGIGDQVPADGLFVSGFSVLIDESSLTGE 290 (1015)
Q Consensus 219 ~~~~~~~~~-------~l~~~~~~~~v~V~R-~G~~~~I~~~dLvvGDIV~i~~Gd~IPADgili~g~~l~VDES~LTGE 290 (1015)
+|.+.++++ +|.+ ..+..++|+| ||++++|++++|+|||+|.+++||+|||||++++|++ .||||+||||
T Consensus 202 ~~le~~a~~~~~~ai~~L~~-l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGE 279 (736)
T 3rfu_A 202 QVLELKAREQTGSAIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGE 279 (736)
T ss_dssp HHHHHHHHCCCSSHHHHHTC-CCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCE-EEEECCCCCC
T ss_conf 99999999999999999883-399889999529989998776689898899879975156379997866-7651235786
Q ss_pred CCCEECCCCCCCEECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98210389996100252565180999999990223276899861689999982699999999999999999999999999
Q 001775 291 SEPVMVNEENPFMLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKGGLFFAVVTFAVL 370 (1015)
Q Consensus 291 s~pv~k~~~~~~l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~a~~i~~~~l~~a~l~~i~~ 370 (1015)
|.|+.|..++. +++||.+.+|.++++|+++|.+|.+++|.+++.+++.+++|+|+..|+++.+++++.+.+++++|++|
T Consensus 280 S~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w 358 (736)
T 3rfu_A 280 PIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVW 358 (736)
T ss_dssp SSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCC-CCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14278316886-77864861450999999841225999999999974326897999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEE
Q ss_conf 99885402478864556752258899999999876664315625999999999999998406544346035542078127
Q 001775 371 VQGLLSHKLGEGSIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSASS 450 (1015)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~~~l~~~~~~l~~~~ilvk~~~~~E~lg~v~~ 450 (1015)
.... ... .+...+..++++++++|||+|++++|+++..++.++.++|+++|+++++|+||++|+
T Consensus 359 ~~~~------~~~----------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 359 ALLG------PQP----------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp HHHC------SSS----------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred HHHC------CCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCE
T ss_conf 9967------873----------299999998774877324278888999999999997515133233789998627999
Q ss_pred EECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHH
Q ss_conf 84066574324852799999827111015778757557899948999999999843885277417996022589029999
Q 001775 451 ICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLLQSIFTNTGGEVVVNKDGKREILGTPTETAL 530 (1015)
Q Consensus 451 I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~Al 530 (1015)
||||||||||+|+|+|.+++..+.. + .+.+..+.+.. ..+.||++.|+
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~-----------------~--~~~l~~aa~le-------------~~s~hPla~Ai 470 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV-----------------E--DNALALAAALE-------------HQSEHPLANAI 470 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC-----------------H--HHHHHHHHHHH-------------HSSCCHHHHHH
T ss_pred EEEECCCCCCCCCEEEEEEEECCCC-----------------H--HHHHHHHHHHH-------------HCCCCHHHHHH
T ss_conf 9981898875895279999834887-----------------7--89999999986-------------22899289999
Q ss_pred HHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHH
Q ss_conf 99999739992665301632688178899951899998089918999738615774036322246991203899889999
Q 001775 531 LEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPGGGLRAHSKGASEIVLSGCDKVVNSTGEVVPLDEESLNHL 610 (1015)
Q Consensus 531 l~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~~~~~~~~~~ 610 (1015)
++++.+.+... ....+|++.+++. +.....+.. +.+|+++.+...+.. ...+
T Consensus 471 v~~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~---------------~~~~ 522 (736)
T 3rfu_A 471 VHAAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD---------------NAPL 522 (736)
T ss_dssp HHHHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC---------------CHHH
T ss_pred HHHHHHCCCCC---------CCCCCCCCCCCCE-EEEEECCEE---EEECCHHHHHHCCCC---------------HHHH
T ss_conf 99999659986---------6754320248865-899999989---997389999873997---------------1678
Q ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q ss_conf 99999999800200103366326899999988775425665640249896106999999986898799986899889999
Q 001775 611 KLTIDQFANEALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKA 690 (1015)
Q Consensus 611 ~~~i~~~a~~glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGd~~~ta~~ 690 (1015)
.+..++++.+|+|++++|+ |.+++|+++++|++|++++++|++|+++|++++|+|||+..++.+
T Consensus 523 ~~~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ 586 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA 586 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 9999999856986999987----------------998999998503220309999999998799499987989899999
Q ss_pred HHHHCCCCCCCCEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCE
Q ss_conf 99991997799502306000025999998453650699961920099999999642799899984898891233106900
Q 001775 691 IARECGILTDDGIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIG 770 (1015)
Q Consensus 691 ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~~g~~v~~vGDg~ND~~al~~Advg 770 (1015)
+|+++||.. ++++++|++|..+++.+|++ |+.|+|+|||.||+|||++||+|
T Consensus 587 ia~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvG 638 (736)
T 3rfu_A 587 VAGTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIG 638 (736)
T ss_dssp HHHHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEE
T ss_pred HHHHCCCCE---------------------------EEEECCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCEE
T ss_conf 999859987---------------------------99706999999999999966-99899998985769999869977
Q ss_pred EEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCC--CCHHHHHHH
Q ss_conf 530578838787306887325991289999999999999767657777643358899998740-12599--980189999
Q 001775 771 LAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSA-CLTGS--APLTAVQLL 847 (1015)
Q Consensus 771 iamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~~-~~~~~--~pl~~~qll 847 (1015)
|||| +|+|.++++||+++.+++++++.+++++||++++||++|+.|++.||+++++++.... .+.|. +|+-+.-..
T Consensus 639 IAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~~m 717 (736)
T 3rfu_A 639 IAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAM 717 (736)
T ss_dssp EEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHHHH
T ss_pred EEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 9947-865999976999992698789999999999999999999999999999999999987877504313299999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999877767450
Q 001775 848 WVNMIMDTLGALAL 861 (1015)
Q Consensus 848 ~inli~~~l~~l~l 861 (1015)
..+-+.-.+-++-|
T Consensus 718 ~~Ssv~Vv~nslrl 731 (736)
T 3rfu_A 718 ALSSVSVIINALRL 731 (736)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHH
T ss_conf 74399999998986
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=712.56 Aligned_cols=570 Identities=25% Similarity=0.329 Sum_probs=450.3
Q ss_pred CCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 98429999999995556999------999999999998861-5999984115899999999999876299999988999-
Q 001775 157 TPRSFWVFVWEALQDMTLMI------LGACAFVSLIVGIVM-EGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKD- 228 (1015)
Q Consensus 157 ~~~~f~~~~~~~~~~~~~~i------ll~~a~is~~~~~~~-~g~~~~~~d~~~i~~~illv~~v~a~~~~~~~~~~~~- 228 (1015)
.+.+|++.+|+++++....+ ...+|++..++.... .+.+..|||+.++++.++++ +++.+.+++++
T Consensus 47 ~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~ 120 (645)
T 3j08_A 47 SGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRT 120 (645)
T ss_dssp HHHHHHHHTCCTTTTCSGGGCCCCSCHHHHHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHH------HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_conf 99999999999997489992899999999999999999986335632599999999999999------999999999999
Q ss_pred ------HHHHHCCCEEEEEECCEEEEEECCCCCCCEEEEECCCCEECCCEEEEEECCEEEECCCCCCCCCCEECCCCCCC
Q ss_conf ------88331697589998997999972565667099967998423438999404234840236799982103899961
Q 001775 229 ------LDKEKKKIYVQVTRNGFRQKLSIYDLLPGDIVHLGIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVNEENPF 302 (1015)
Q Consensus 229 ------l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~i~~Gd~IPADgili~g~~l~VDES~LTGEs~pv~k~~~~~~ 302 (1015)
+.+ ..+..++|+|||++++|+++||+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|..++.
T Consensus 121 ~~~l~~l~~-l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~Pv~K~~g~~- 197 (645)
T 3j08_A 121 GEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE- 197 (645)
T ss_dssp CCCCHHHHH-TSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-
T ss_pred HHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEECCE-EEECCCCCCCCCCEECCCCCE-
T ss_conf 999999861-79997999999979998899979899999889998866899998868-998022469987656089997-
Q ss_pred EECCCEEECCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 00252565180999999990223276899861689999982699999999999999999999999999998854024788
Q 001775 303 MLSGTKLQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKGGLFFAVVTFAVLVQGLLSHKLGEG 382 (1015)
Q Consensus 303 l~aGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t~lq~~l~~~a~~i~~~~l~~a~l~~i~~~~~~~~~~~~~~ 382 (1015)
+++||.+.+|.++++|+++|.+|.++++.+++++++.+++|+|+..|+++.++.++.+.++++++++|.. . .+
T Consensus 198 v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~---~----~~ 270 (645)
T 3j08_A 198 VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYF---I----AH 270 (645)
T ss_dssp ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSC---C----CS
T ss_pred EECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H----CC
T ss_conf 4166798257299999972774599999999997314698589999999999999999999999999999---5----69
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf 64556752258899999999876664315625999999999999998406544346035542078127840665743248
Q 001775 383 SIWSWSGDDALKLLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTN 462 (1015)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~i~ilvv~iP~~L~lav~~~l~~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n 462 (1015)
. .+...+..++++++++|||+|++++|+++..++.++.++|+++|+++++|++|++++||||||||||+|
T Consensus 271 ~----------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~ 340 (645)
T 3j08_A 271 A----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKG 340 (645)
T ss_dssp C----------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSS
T ss_pred C----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 8----------699999999999998736689999999999999999977937668169998627999998686665589
Q ss_pred CEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHH
Q ss_conf 52799999827111015778757557899948999999999843885277417996022589029999999997399926
Q 001775 463 HMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLLQSIFTNTGGEVVVNKDGKREILGTPTETALLEFGLSLGGDFQ 542 (1015)
Q Consensus 463 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~ 542 (1015)
+|+|.+++..+.. ..+.+..+.... ..+.||++.|+++++.+.+....
T Consensus 341 ~~~v~~~~~~~~~-------------------~~~~l~~aa~~e-------------~~s~hPla~Aiv~~a~~~g~~~~ 388 (645)
T 3j08_A 341 KPEVTDLVPLNGD-------------------ERELLRLAAIAE-------------RRSEHPIAEAIVKKALEHGIELG 388 (645)
T ss_dssp CCEEEEEEESSSC-------------------HHHHHHHHHHHH-------------TTCCSHHHHHHHHHHHHTTCCCC
T ss_pred CEEEEEEEECCCC-------------------HHHHHHHHHHHH-------------HCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 7079999817999-------------------799999999975-------------15887467999999996599867
Q ss_pred HHHHCCCEEEEECCCCCCCEEEEEEEECCCCEE--EEECCCHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 653016326881788999518999980899189--997386157740363222469912038998899999999999980
Q 001775 543 AERQTSKIVKVEPFNSSKKRMGVVLELPGGGLR--AHSKGASEIVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQFANE 620 (1015)
Q Consensus 543 ~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~--~~~KGa~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~a~~ 620 (1015)
.. .+|.+ .++.+.. .+.+|+++.+.+. +. +.. +.+.+..++++.+
T Consensus 389 ~~---------~~~~~----------~~g~g~~~~~v~~g~~~~~~~~--------~~--~~~----~~~~~~~~~~~~~ 435 (645)
T 3j08_A 389 EP---------EKVEV----------IAGEGVVADGILVGNKRLMEDF--------GV--AVS----NEVELALEKLERE 435 (645)
T ss_dssp SC---------CCCEE----------ETTTEEEETTEEEECHHHHHHT--------TC--CCC----HHHHHHHHHHHTT
T ss_pred CC---------CCEEE----------ECCCCEEEEEEEECCHHHHHHC--------CC--CCC----HHHHHHHHHHHHC
T ss_conf 86---------53599----------6588469999998879999754--------98--751----8899999999855
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 02001033663268999999887754256656402498961069999999868987999868998899999999199779
Q 001775 621 ALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTD 700 (1015)
Q Consensus 621 glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGd~~~ta~~ia~~~gi~~~ 700 (1015)
|+|++++|+ |++++|+++++|++||+++++|++|+++|++++|+|||+..++.++|+++|+..
T Consensus 436 g~~~l~va~----------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~- 498 (645)
T 3j08_A 436 AKTAVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL- 498 (645)
T ss_dssp TCCCEEEEE----------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-
T ss_pred CCEEEEEEE----------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCE-
T ss_conf 983899988----------------999999999348765679999999997799799990888799999999839978-
Q ss_pred CCEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCEEEECCCCCHH
Q ss_conf 95023060000259999984536506999619200999999996427998999848988912331069005305788387
Q 001775 701 DGIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 780 (1015)
Q Consensus 701 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~~g~~v~~vGDg~ND~~al~~Advgiamgi~g~~~ 780 (1015)
++++++|++|...++.++++ +.|+|+|||.||+|||++||+||||| +|++.
T Consensus 499 --------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~ 549 (645)
T 3j08_A 499 --------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDV 549 (645)
T ss_dssp --------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCC
T ss_pred --------------------------EEEECCHHHHHHHHHHHHHC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHH
T ss_conf --------------------------99837877689999998609--95999969776899997599889948-87599
Q ss_pred HHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 87306887325991289999999999999767657777643358899998740125---999801899999999987776
Q 001775 781 AKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLT---GSAPLTAVQLLWVNMIMDTLG 857 (1015)
Q Consensus 781 a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~---~~~pl~~~qll~inli~~~l~ 857 (1015)
++++||+++.+++++++.+++++||++++||++|+.|+++||++++++++.+.... .-.|.-+.-....+-+.-.+-
T Consensus 550 a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~n 629 (645)
T 3j08_A 550 AVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVAN 629 (645)
T ss_dssp SSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHH
T ss_pred HHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
T ss_conf 99869999936998899999999999999999999999999999999999867651035338999999871516898875
Q ss_pred HHHCCC
Q ss_conf 745056
Q 001775 858 ALALAT 863 (1015)
Q Consensus 858 ~l~l~~ 863 (1015)
++-|..
T Consensus 630 slrl~~ 635 (645)
T 3j08_A 630 SLLLRN 635 (645)
T ss_dssp TTSCCC
T ss_pred HHHHCC
T ss_conf 687616
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=253.86 Aligned_cols=260 Identities=23% Similarity=0.365 Sum_probs=198.0
Q ss_pred HHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999840654434603554207812784066574324852799999827111015778757557899948999999999
Q 001775 424 FAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLLQSI 503 (1015)
Q Consensus 424 ~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 503 (1015)
.++.++.++|+++|+++++|.|+++++||||||||||+|+|.+.++. .. ++..+.+. +
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~~-~- 61 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYAA-S- 61 (263)
Q ss_pred HHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHH
Q ss_conf 84388527741799602258902999999999739992665301632688178899951899998089918999738615
Q 001775 504 FTNTGGEVVVNKDGKREILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPGGGLRAHSKGASE 583 (1015)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~~~~KGa~e 583 (1015)
. ...+.||...|+..++...+...... .. +...++.+....++|..
T Consensus 62 -------~-------e~~s~hp~a~ai~~~~~~~g~~~~~~---------~~----------~~~~~G~g~~~~~~~~~- 107 (263)
T 2yj3_A 62 -------V-------EALSSHPIAKAIVKYAKEQGVKILEV---------KD----------FKEISGIGVRGKISDKI- 107 (263)
Q ss_pred HHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCH
Q ss_conf 77403632224699120389988999999999999800200103366326899999988775425665640249896106
Q 001775 584 IVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKDPVRPGV 663 (1015)
Q Consensus 584 ~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D~lr~~~ 663 (1015)
..+ | .. .++.+ +.. ..+..+.|.+.+.|+++|++
T Consensus 108 ~~~----------G------~~-------------~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 108 IEV----------K------KA-------------ENNND-IAV----------------YINGEPIASFNISDVPRPNL 141 (263)
Q ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHHHHHHHH
Q ss_conf 99999998689879998689988999999991997799502306000025999998453650699961920099999999
Q 001775 664 KESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKHTLVKHL 743 (1015)
Q Consensus 664 ~~~I~~l~~aGi~v~m~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l 743 (1015)
.++++.|++.|+++.|+|||+...+..+++++|+.. +|+...|++|...++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Q ss_pred HHHCCCEEEEECCCCCCHHHHHCCCCEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64279989998489889123310690053057883878730688732599128999999999999976765
Q 001775 744 RTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKF 814 (1015)
Q Consensus 744 ~~~~g~~v~~vGDg~ND~~al~~Advgiamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~ 814 (1015)
+.. ++.++|+|||.||+++++.|++|+++| ++++.+++.+|+++.++++..+..++..+|.++++|++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=212.85 Aligned_cols=278 Identities=28% Similarity=0.431 Sum_probs=212.0
Q ss_pred HHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999840654434603554207812784066574324852799999827111015778757557899948999999999
Q 001775 424 FAMKKMMNDKALVRHLAACETMGSASSICSDKTGTLTTNHMTVVKSCICMNVKEVSKTDSASSLCSEIPDSAVQLLLQSI 503 (1015)
Q Consensus 424 ~~~~~l~~~~ilvk~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 503 (1015)
-+.+++.++|+++|++.++|+|+++++||||||||||.+.+.+.+++..+. . .+..+++ +.
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~---~~ 68 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRL---AA 68 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHH---HH
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC--C--------------HHHHHHH---HH
T ss_conf 157899879979968089988536999999689988289779999981799--9--------------9999999---99
Q ss_pred HHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEE--EECCC
Q ss_conf 8438852774179960225890299999999973999266530163268817889995189999808991899--97386
Q 001775 504 FTNTGGEVVVNKDGKREILGTPTETALLEFGLSLGGDFQAERQTSKIVKVEPFNSSKKRMGVVLELPGGGLRA--HSKGA 581 (1015)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~~~~~~~~~~~~i~~~~pF~s~~k~m~viv~~~~~~~~~--~~KGa 581 (1015)
... ..+.||...|+..++...+...... +... ...+.+... +.+|.
T Consensus 69 ~~e-------------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~---------------~~~G~~~~~~~~~~g~ 116 (287)
T 3a1c_A 69 IAE-------------RRSEHPIAEAIVKKALEHGIELGEP----EKVE---------------VIAGEGVVADGILVGN 116 (287)
T ss_dssp HHT-------------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEE---------------EETTTEEEETTEEEEC
T ss_pred HHH-------------HCCCCHHHHHHHHHHHHCCCCCCCC----CCCE---------------EECCCCEEEEEEEECC
T ss_conf 975-------------2179979999999998659985555----4414---------------6248872889999889
Q ss_pred HHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 15774036322246991203899889999999999998002001033663268999999887754256656402498961
Q 001775 582 SEIVLSGCDKVVNSTGEVVPLDEESLNHLKLTIDQFANEALRTLCLAFMELETGFSPENPIPVSGYTLIAIVGIKDPVRP 661 (1015)
Q Consensus 582 ~e~il~~c~~~~~~~g~~~~~~~~~~~~~~~~i~~~a~~glr~l~~A~~~~~~~~~~~~~~~~~~l~llG~~~i~D~lr~ 661 (1015)
++.+-. .+. +.+ ..+....+.+..+|.+++++++ +..+.+.+...++++|
T Consensus 117 ~~~~~~--------~~~--~~~----~~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 117 KRLMED--------FGV--AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp HHHHHH--------TTC--CCC----HHHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCT
T ss_pred HHHHHH--------CCC--CCC----HHHHHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEECCCCCH
T ss_conf 999986--------599--750----7789999998747975999999----------------9989999995453614
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECHHHCCCCHHHHHHHCCCEEEEEECCHHCHHHHHH
Q ss_conf 06999999986898799986899889999999919977995023060000259999984536506999619200999999
Q 001775 662 GVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVFREKTTEELMELIPKIQVMARSSPLDKHTLVK 741 (1015)
Q Consensus 662 ~~~~~I~~l~~aGi~v~m~TGd~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~ 741 (1015)
++.++++.|+++|+++.++||++...+..+.+.+|+.. .|....|..|...++
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~ 219 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVK 219 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE---------------------------EEEECCHHHHHHHHH
T ss_conf 18999999997798599990989899999999809813---------------------------110058177999999
Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHCCCCEEEECCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99642799899984898891233106900530578838787306887325991289999999999999767
Q 001775 742 HLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQ 812 (1015)
Q Consensus 742 ~l~~~~g~~v~~vGDg~ND~~al~~Advgiamgi~g~~~a~~~aDivl~~~~~~~i~~~i~~gR~~~~~i~ 812 (1015)
.++.. +.++|+||+.||++|.+.|+++++++ ++.+..+..+|+++.++++..+..++..+|.++++|+
T Consensus 220 ~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 220 KLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 98258--83999979777899999789529967-8877889629999947998999999999999998509
Done!