Your job contains 1 sequence.
>001776
MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFFNMRYFEDMVTNGEWDEVEKYLSGF
TKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLT
LENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN
WQHQLCKNPRANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGAVPKAGAFPPLSAHGPFQ
PTPAALPTSLAGWMANPSPVPHPSPSAGPIALTAANNAAAILKRPRTPPTNNSAMDYQTA
DSEHVLKRSRPFGISDEVNNLSVNILPVAYTPQSLGQSSYSTDDLPKTVVMTLNQGSAVK
SMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTAS
VNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSV
VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDN
LGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRS
VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVS
TNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANVGTSLGERT
APAAAMVGMSNDSRNFTDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDNLTAMRVS
RLIYTNSGLAILALASNAVHKLWKWPRNERNSTGKATTNQAPQLWQPPSGILMTNDISDT
NPEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNII
AIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWE
KQASKFLTIPNGRTASALADTRVQFHLDQTHLLAVHETQIAIYEAPKLECLKQVG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001776
(1015 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036204 - symbol:TPL "TOPLESS" species:3702 "A... 3886 0. 2
TAIR|locus:2086770 - symbol:TPR2 "TOPLESS-related 2" spec... 3169 0. 1
TAIR|locus:2198888 - symbol:TPR1 "TOPLESS-related 1" spec... 2785 0. 2
TAIR|locus:2040100 - symbol:AT2G25420 "AT2G25420" species... 427 1.3e-67 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 211 4.8e-15 2
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 119 8.5e-14 3
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 193 1.3e-13 2
UNIPROTKB|G4MUL1 - symbol:MGG_07284 "Target-rapamycin com... 190 1.6e-12 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 211 7.7e-12 2
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 124 2.1e-11 3
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 140 2.3e-11 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 149 6.1e-11 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 138 2.8e-10 3
FB|FBgn0037094 - symbol:CG7611 species:7227 "Drosophila m... 121 3.8e-10 2
UNIPROTKB|J9JHP3 - symbol:APAF1 "Apoptotic protease-activ... 149 3.8e-10 2
POMBASE|SPBC21B10.05c - symbol:pop3 "WD repeat protein Po... 156 4.9e-10 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 120 6.3e-10 2
WB|WBGene00006810 - symbol:unc-78 species:6239 "Caenorhab... 137 1.3e-09 3
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 135 1.7e-09 2
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 101 2.4e-09 3
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 166 3.9e-09 1
WB|WBGene00019434 - symbol:nmtn-1 species:6239 "Caenorhab... 109 4.5e-09 3
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 120 4.8e-09 2
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 133 5.2e-09 3
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 128 8.1e-09 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 150 8.8e-09 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 134 1.0e-08 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 155 1.1e-08 2
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 141 1.1e-08 3
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 141 1.1e-08 3
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 130 1.2e-08 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 143 1.2e-08 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 150 1.3e-08 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 141 1.4e-08 3
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 124 1.7e-08 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 124 1.7e-08 2
ZFIN|ZDB-GENE-041014-277 - symbol:wdr26b "WD repeat domai... 121 1.7e-08 4
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 146 2.0e-08 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 112 2.0e-08 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 163 2.3e-08 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 140 2.3e-08 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 156 2.4e-08 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 134 2.6e-08 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 127 2.9e-08 2
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 155 3.1e-08 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 130 3.1e-08 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 131 3.4e-08 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 132 3.5e-08 3
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 140 3.8e-08 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 140 3.8e-08 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 140 3.8e-08 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 124 3.8e-08 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 131 4.1e-08 2
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 130 4.1e-08 2
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 130 4.1e-08 2
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 148 5.3e-08 2
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 131 5.6e-08 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 131 5.7e-08 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 159 6.2e-08 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 151 8.1e-08 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 143 8.6e-08 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 142 9.2e-08 2
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 154 9.6e-08 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 155 9.6e-08 1
UNIPROTKB|F1MUW4 - symbol:APAF1 "Uncharacterized protein"... 134 1.0e-07 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 153 1.0e-07 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 129 1.1e-07 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 142 1.1e-07 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 153 1.3e-07 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 153 1.3e-07 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 153 1.3e-07 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 153 1.3e-07 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 153 1.3e-07 1
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 130 1.4e-07 2
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 152 1.6e-07 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 154 1.8e-07 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 127 2.1e-07 3
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 141 2.1e-07 4
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 132 2.1e-07 2
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 151 2.2e-07 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 151 2.2e-07 1
UNIPROTKB|O94967 - symbol:WDR47 "WD repeat-containing pro... 112 2.4e-07 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 146 2.5e-07 2
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 150 2.6e-07 1
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 150 2.6e-07 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 150 2.7e-07 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 128 2.7e-07 3
UNIPROTKB|E1BBZ9 - symbol:WSB1 "Uncharacterized protein" ... 152 2.9e-07 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 152 3.1e-07 1
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 130 3.4e-07 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 149 3.7e-07 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 123 4.1e-07 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 147 4.3e-07 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 147 4.3e-07 2
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 129 4.6e-07 3
UNIPROTKB|Q9W7K9 - symbol:SWiP-1 "SOCS box-containing WD ... 150 4.7e-07 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 148 4.8e-07 1
MGI|MGI:2139593 - symbol:Wdr47 "WD repeat domain 47" spec... 114 4.8e-07 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 127 6.9e-07 2
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 146 8.0e-07 1
WARNING: Descriptions of 305 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2036204 [details] [associations]
symbol:TPL "TOPLESS" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010072 "primary shoot apical meristem
specification" evidence=IGI;IMP] [GO:0009733 "response to auxin
stimulus" evidence=IPI] [GO:0010051 "xylem and phloem pattern
formation" evidence=IGI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0009733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0010072 GO:GO:0010051 EMBL:AC034256 GO:GO:0009867
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 HSSP:P46680
EMBL:AY046013 EMBL:AY142619 IPI:IPI00520108 PIR:G86291
RefSeq:NP_001031050.1 RefSeq:NP_001031051.1 RefSeq:NP_563981.1
RefSeq:NP_849672.1 UniGene:At.48194 UniGene:At.69991
ProteinModelPortal:Q94AI7 SMR:Q94AI7 DIP:DIP-52391N IntAct:Q94AI7
STRING:Q94AI7 PaxDb:Q94AI7 PRIDE:Q94AI7 ProMEX:Q94AI7
EnsemblPlants:AT1G15750.1 EnsemblPlants:AT1G15750.2
EnsemblPlants:AT1G15750.3 EnsemblPlants:AT1G15750.4 GeneID:838144
KEGG:ath:AT1G15750 GeneFarm:2933 TAIR:At1g15750
HOGENOM:HOG000237725 InParanoid:Q94AI7 OMA:HADRSAN PhylomeDB:Q94AI7
ProtClustDB:CLSN2687817 Genevestigator:Q94AI7 Uniprot:Q94AI7
Length = 1131
Score = 3886 (1373.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 739/1017 (72%), Positives = 845/1017 (83%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFFNMRYFEDMVTNGEWDEVEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKETVHKLEQ+SGFFFNM+YFED V NG WDEVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALDK DR KAV+ILVKDLKVFS FNE+LFKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN 180
LENFR+NEQLSKYGDTKSAR IML ELKKLIEANPLFRDKLQFP+L+NSRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGAVPKAGAFPPLSAHGPFQ 240
WQHQLCKNPR NPDIKTLFVDH+CG PNGARAPSPV NPL+G +PKAG FPPL AHGPFQ
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCGPPNGARAPSPVNNPLLGGIPKAGGFPPLGAHGPFQ 240
Query: 241 PTPAALPTSLAGWMANPSPVPHPSPSAGPXXXXXXXXXXXXXKRPRTPPTNNSAMDYQTA 300
PT + +PT LAGWM++PS VPHP+ SAG K PRTPPTN S +DY +A
Sbjct: 241 PTASPVPTPLAGWMSSPSSVPHPAVSAG-AIALGGPSIPAALKHPRTPPTNAS-LDYPSA 298
Query: 301 DSEHVLKRSRPFGISDEVNNLSVNILPVAYTPQSLGQSSY--STDDLPKTVVMTLNQGSA 358
DSEHV KR+RP GISDEVN L VN+LP++++ Q+ G S + DDLPKTV TL+QGS+
Sbjct: 299 DSEHVSKRTRPMGISDEVN-LGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSS 357
Query: 359 VKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYT 418
SMDFHP++Q LL+VGTN+GD+ LWEVGSRER+ K+FKVW+L CSMPLQA+L +
Sbjct: 358 PMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKEPV 417
Query: 419 ASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQL 478
SVNRV+WSPDG+LFGVAYS+HIV LY+YHGG+++R HLEI+AHVG VND++FS PNKQL
Sbjct: 418 VSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQL 477
Query: 479 SVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLY 538
V+TCG+D+ IKVWDA TG K++ FEGHE+PVYS+CPH+KENIQFIFSTA DGKIKAWLY
Sbjct: 478 CVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLY 537
Query: 539 DNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGK 598
DN+GSRVDYDAPG T MAYSADG RLFSCGT+K+GES++VEWNESEGAVKRTY G K
Sbjct: 538 DNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHK 597
Query: 599 RSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
RS+GVVQFDTTKNR+LAAGD+F IKFWDMD V LL +ID DGGLQASP IRFNKEG LLA
Sbjct: 598 RSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLA 657
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANVGTSLG- 717
VS N+N IKI+AN+DG+RLL T E+ + ++S+ PAI + +A A TS G
Sbjct: 658 VSGNENVIKIMANSDGLRLLHTFENISSESSK---------PAINSIAAAAAAAATSAGH 708
Query: 718 -ERTAPAAAMVGMSNDSRNFTDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDNLTA 776
+R+A ++ GM+ DSRN DVKP I +E+ +KS+IWKLTE++EPSQCRSLRLP+NL
Sbjct: 709 ADRSANVVSIQGMNGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPENLRV 768
Query: 777 MRVSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTGKATTNQAPQLWQPPSGILMTND 836
++SRLI+TNSG AILALASNA+H LWKW RNERN+TGKAT + PQ WQP SGILMTND
Sbjct: 769 AKISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGILMTND 828
Query: 837 ISDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQD 896
+++TNPE+AVPCFALSKNDSYVMSASGGKISLFN HPQD
Sbjct: 829 VAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQD 888
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
NNIIAIGM+DS+IQIYNVRVDEVK+KLKGH KRITGLAFSN LNVLVSSGAD+QLCVW+T
Sbjct: 889 NNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Query: 957 DGWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLLAVHETQIAIYEAPKLECLKQ 1013
DGWEKQ SK L +P GR SA +DTRVQFH DQ H L VHETQ+AIYE KLEC+KQ
Sbjct: 949 DGWEKQRSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECMKQ 1005
Score = 38 (18.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 930 ITGLAFSNTLNVLVSSGADSQLCVWST 956
IT FS ++ +S D+ +CV+S+
Sbjct: 1015 ITHATFSCDSQLVYASFMDATVCVFSS 1041
>TAIR|locus:2086770 [details] [associations]
symbol:TPR2 "TOPLESS-related 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AB028608 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HSSP:P46680 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AY074277 IPI:IPI00523281 RefSeq:NP_188306.2 UniGene:At.24033
ProteinModelPortal:Q9LRZ0 SMR:Q9LRZ0 DIP:DIP-58586N STRING:Q9LRZ0
PaxDb:Q9LRZ0 PRIDE:Q9LRZ0 EnsemblPlants:AT3G16830.1 GeneID:820936
KEGG:ath:AT3G16830 GeneFarm:3122 TAIR:At3g16830 InParanoid:Q9LRZ0
OMA:KSARSIM PhylomeDB:Q9LRZ0 Genevestigator:Q9LRZ0 Uniprot:Q9LRZ0
Length = 1131
Score = 3169 (1120.6 bits), Expect = 0., P = 0.
Identities = 635/1027 (61%), Positives = 758/1027 (73%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFFNMRYFEDMVTNGEWDEVEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKE+VHKLEQ+SGFFFN++YFE+ GEWDEVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ DRAKAVEIL KDLKVF+ FNE+L+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLT 120
Query: 121 LENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN 180
LENFR+NEQLSKYGDTKSAR IM ELKKLIEANPLFR+KL FPS K SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGAVPKAGAFPPLSAHG-PF 239
WQHQLCKNPR NPDIKTLF+DH+C NGARA +PV P+ AV + F PL HG PF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFLDHSCSPSNGARALTPVNLPV-AAVARPSNFVPLGVHGGPF 239
Query: 240 QPTPAALPTS--LAGWMANPSP---VPHPSPSAGPXXXXXXXXXXXXXKRPRTPPTNNSA 294
Q PA P + LAGWMANP+P VP +A P K PR P +
Sbjct: 240 QSNPAPAPNANALAGWMANPNPSSSVPSGVVAASPFPMQPSQVNEL--KHPRAPSNSLGL 297
Query: 295 MDYQTADSEHVLKRSRPFGISDEVNNLSVNILPV-AYTPQSLGQSSYSTDDLPKTVVMTL 353
MDYQ+AD E ++KR R S+EV P ++ P SL DDLP+ VV T+
Sbjct: 298 MDYQSADHEQLMKRLRSAQTSNEVT------YPAHSHPPASL-------DDLPRNVVSTI 344
Query: 354 NQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQASL 413
QGS V SMDFHP LL VG + G+V LWEVGSRE++ + FK+W + ACS+ Q S+
Sbjct: 345 RQGSVVISMDFHPSHHTLLAVGCSSGEVTLWEVGSREKVVTEPFKIWNMAACSVIFQGSI 404
Query: 414 SSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSY 473
+ + SV RV WSPDG L GV+++KH++H+Y Y G D LR HLEI+AHVG VNDLAF++
Sbjct: 405 VKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAYQGSD-LRQHLEIDAHVGCVNDLAFAH 463
Query: 474 PNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKI 533
PNKQ+ VVTCG+D++IKVWD ++G K + FEGHE+PVYSICPH KENIQFIFSTA DGKI
Sbjct: 464 PNKQMCVVTCGDDKLIKVWD-LSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKI 522
Query: 534 KAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
KAWLYDN+GSRVDYDAPG T M YSADG+RLFSCGT+KEG+S+LVEWNESEGA+KRTY
Sbjct: 523 KAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTY 582
Query: 594 HGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKE 653
G K+S GVVQFDTT+NRFLA G++ IKFW+MDN NLL ++A+GGL P +RFNK+
Sbjct: 583 LGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKD 642
Query: 654 GILLAVSTNDNGIKILANADGIRLLRTVESRTFDASR------VASAAIVKA--PAIGTF 705
G LLAV+T DNG KILAN DG+R LR E+R+F+AS+ V+++A+ + PAIG
Sbjct: 643 GNLLAVTTADNGFKILANTDGLRTLRAFEARSFEASKASIDMKVSTSAMASSISPAIGKI 702
Query: 706 GSANANVGTSLGERTAPAAAMVGMSNDSRNFTDVKPKIADEAVEKSRIWKLTEITEPSQC 765
+A G P G+ SR T KP+ D +V+KS+ +LTEI +P+QC
Sbjct: 703 EHMDA------GSPARPTPIPNGIEAMSR--TMEKPRNLD-SVDKSKPLELTEIVDPTQC 753
Query: 766 RSLRLPDNLTAM-RVSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTGKATTNQAPQL 824
R + +PD+ ++ +V+RL+YTNSG+ +LAL SN V +LWKW RNE+N TGKAT + PQ
Sbjct: 754 RQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKWIRNEQNPTGKATASVTPQH 813
Query: 825 WQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXX 884
WQP SG+LM ND+ + NPE +VPC ALSKNDSYVMSA GGK+SLFN
Sbjct: 814 WQPNSGLLMANDVPE-NPEGSVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPP 872
Query: 885 XXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVS 944
HPQDNNIIAIGMEDSSI IYNVRVDEVKTKLKGHQK ITGLAFS LN+LVS
Sbjct: 873 PASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVS 932
Query: 945 SGADSQLCVWSTDGWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLLAVHETQIAIYE 1004
SGAD+QL W+ D WEK+ S + +P G+ + + DTRVQFH DQ LL HETQ+AIY+
Sbjct: 933 SGADAQLFFWTADSWEKKKSSAIQLPPGK--APVGDTRVQFHNDQIQLLVSHETQLAIYD 990
Query: 1005 APKLECL 1011
A K+EC+
Sbjct: 991 ASKMECI 997
>TAIR|locus:2198888 [details] [associations]
symbol:TPR1 "TOPLESS-related 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AC018849 EMBL:AC034256 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AK226879 IPI:IPI00542045 IPI:IPI00852338 PIR:G96836
RefSeq:NP_178164.3 RefSeq:NP_849913.2 UniGene:At.25188
ProteinModelPortal:Q0WV90 SMR:Q0WV90 DIP:DIP-59361N STRING:Q0WV90
PaxDb:Q0WV90 PRIDE:Q0WV90 EnsemblPlants:AT1G80490.2 GeneID:844388
KEGG:ath:AT1G80490 GeneFarm:3123 TAIR:At1g80490 InParanoid:Q0WV90
OMA:FMDATIC PhylomeDB:Q0WV90 Genevestigator:Q0WV90 Uniprot:Q0WV90
Length = 1120
Score = 2785 (985.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 525/705 (74%), Positives = 602/705 (85%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFFNMRYFEDMVTNGEWDEVEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKETVHKLEQ+SGFFFNM+YFED V NG WDEVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGF 60
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ DR KAV+ILVKDLKVFS FNE+LFKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLT 120
Query: 121 LENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLN 180
LENFR+NEQLSKYGDTKSAR IML ELKKLIEANPLFRDKLQFP+L+ SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRANPDIKTLFVDHTCGQPNGARAPSPVTNPLMGAVPKAGAFPPLSAHGPFQ 240
WQHQLCKNPR NPDIKTLFVDH+C PN ARAPSPV NPL+G++PKA FPPL AHGPFQ
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLGSLPKAEGFPPLGAHGPFQ 240
Query: 241 PTPAALPTSLAGWMANPSPVPHPSPSAGPXXXXXXXXXXXXXKRPRTPPTNNSAMDYQTA 300
PTP+ +PT LAGWM++PS VPHP+ S GP K PRTPP+N SA+DY +
Sbjct: 241 PTPSPVPTPLAGWMSSPSSVPHPAVSGGPIALGAPSIQAAL-KHPRTPPSN-SAVDYPSG 298
Query: 301 DSEHVLKRSRPFGISDEVNNLSVNILPVAYTPQSLG--QSSYSTDDLPKTVVMTLNQGSA 358
DS+HV KR+RP GISDEV+ L VN+LP+ + Q+ G Q+ + DDLPKTV TL+QGS+
Sbjct: 299 DSDHVSKRTRPMGISDEVS-LGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSS 357
Query: 359 VKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYT 418
SMDFHP++Q LL+VGTN+GD+ LWEVGSRER+ K+FKVW+L CSMPLQA+L +
Sbjct: 358 PMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKEPV 417
Query: 419 ASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQL 478
SVNRV+WSPDG+LFGVAYS+HIV LY+YHGG+++R HLEI+AHVG VND+AFS PNKQL
Sbjct: 418 VSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQL 477
Query: 479 SVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLY 538
V TCG+D+ IKVWDA TG K+Y FEGHE+PVYSICPH+KENIQFIFSTA DGKIKAWLY
Sbjct: 478 CVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLY 537
Query: 539 DNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGK 598
DN+GSRVDY+APG T MAYSADG RLFSCGT+K+GES++VEWNESEGAVKRTY G K
Sbjct: 538 DNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHK 597
Query: 599 RSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
RS+GVVQFDTTKNR+LAAGD+F IKFWDMD + LL +IDADGGLQASP IRFNKEG LLA
Sbjct: 598 RSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLA 657
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVA--SAAIVKAPA 701
VS NDN IK++AN+DG+RLL TVE+ + ++S+ A S +V+ PA
Sbjct: 658 VSANDNMIKVMANSDGLRLLHTVENLSSESSKPAINSIPMVERPA 702
Score = 1098 (391.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 206/296 (69%), Positives = 238/296 (80%)
Query: 718 ERTAPAAAMVGMSNDSRNFTDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDNLTAM 777
ER A ++ GM+ DSRN DVKP I +E+ +KS++WKLTE+ EPSQCRSLRLP+N+
Sbjct: 699 ERPASVVSIPGMNGDSRNMVDVKPVITEESNDKSKVWKLTEVGEPSQCRSLRLPENMRVT 758
Query: 778 RVSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTGKATTNQAPQLWQPPSGILMTNDI 837
++SRLI+TNSG AILALASNA+H LWKW RN+RN+TGKAT + PQ WQP SGILMTND+
Sbjct: 759 KISRLIFTNSGNAILALASNAIHLLWKWQRNDRNATGKATASLPPQQWQPASGILMTNDV 818
Query: 838 SDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 897
++TNPE+AVPCFALSKNDSYVMSASGGKISLFN HPQDN
Sbjct: 819 AETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDN 878
Query: 898 NIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
NIIAIGM+DS+IQIYNVRVDEVK+KLKGH KRITGLAFSN LNVLVSSGAD+QLCVW+TD
Sbjct: 879 NIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTD 938
Query: 958 GWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLLAVHETQIAIYEAPKLECLKQ 1013
GWEKQ SK L IP GR+ S+L+DTRVQFH DQ H L VHETQ+AIYE KLEC+KQ
Sbjct: 939 GWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLECMKQ 994
Score = 62 (26.9 bits), Expect = 5.2e-294, Sum P(2) = 5.2e-294
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVK 920
HPQ++N+ A+G+ D + I+ E K
Sbjct: 1062 HPQESNMFAVGLSDGGVHIFEPLESEGK 1089
Score = 40 (19.1 bits), Expect = 1.1e-291, Sum P(2) = 1.1e-291
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 930 ITGLAFSNTLNVLVSSGADSQLCVWST 956
IT FS ++ +S D+ +CV+S+
Sbjct: 1004 ITHATFSCDSQLIYTSFMDATICVFSS 1030
>TAIR|locus:2040100 [details] [associations]
symbol:AT2G25420 "AT2G25420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010050 "vegetative phase change" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K14558
EMBL:AK226678 IPI:IPI00517803 RefSeq:NP_565594.3 UniGene:At.23385
ProteinModelPortal:Q0WVR3 SMR:Q0WVR3 STRING:Q0WVR3 PRIDE:Q0WVR3
EnsemblPlants:AT2G25420.1 GeneID:817080 KEGG:ath:AT2G25420
TAIR:At2g25420 eggNOG:NOG240498 HOGENOM:HOG000120706
InParanoid:Q0WVR3 OMA:STEWEVA PhylomeDB:Q0WVR3
ProtClustDB:CLSN2920575 Genevestigator:Q0WVR3 Uniprot:Q0WVR3
Length = 740
Score = 427 (155.4 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 102/262 (38%), Positives = 142/262 (54%)
Query: 755 KLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTG 814
K EI +PSQC +L LPD + +++RL Y+ SG ILALA +A HKLW W ++ N
Sbjct: 368 KPNEIKDPSQCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWSSSQ-NEFC 426
Query: 815 KATTNQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXX 874
K P+L QP SG M N+++ T+ + + CFA+ SY+ S SGGKI++F+
Sbjct: 427 KENVYPKPRLHQPQSGKTMENEMA-TSVQKSTSCFAVK--GSYLFSTSGGKIAVFDLKNF 483
Query: 875 XXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA 934
P D ++A+G++D SI I+ + +VK KL+GH ++IT LA
Sbjct: 484 EKVASFGSPTPMATYFIFIPGD--LLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLA 541
Query: 935 FSNTLNVLVSSGADSQLCVWSTDGWEKQASKFLT---IPNGRTASALADTRVQFHLDQTH 991
FS NVLVSS +D +LC+WST W K SK T S T +QF Q
Sbjct: 542 FSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIE 601
Query: 992 LLAVHETQIAIYEAPKLECLKQ 1013
LL VH+ I +YE L+C Q
Sbjct: 602 LLVVHDGWIGLYEVRTLDCRLQ 623
Score = 340 (124.7 bits), Expect = 1.3e-67, Sum P(2) = 1.3e-67
Identities = 69/171 (40%), Positives = 103/171 (60%)
Query: 6 RELVFLILQFLDEEKFKETVHKLEQDSGFFFNMRYFEDMVTNGEWDEVEKYLSGFTKVDD 65
+ LVFLILQF DEE ++E++H LEQDSG FF+ Y + + NG W + + YLS FT +
Sbjct: 9 KNLVFLILQFFDEEGYEESLHLLEQDSGVFFDFSYLSNAILNGNWKDADDYLSAFTSPEA 68
Query: 66 NRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLTLENFR 125
N +S K+FF + K K+ EA D+ ++AV+I KDL+ +D F ++ +++ +++ R
Sbjct: 69 NTFSRKMFFGLFKLKFSEAPDRSGGSEAVKIFSKDLRRIPVLKDDSFDDLVEVIAVDDMR 128
Query: 126 DNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLIN 176
E+ D R + +L KL E+NP R KL FPSL S L LI+
Sbjct: 129 IPEETCCV-DKAPGRAKLCVDLHKLAESNPSLRGKLDFPSLNKSALLALIS 178
Score = 195 (73.7 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 36/83 (43%), Positives = 57/83 (68%)
Query: 4 LSRELVFLILQFLDEEKFKETVHKLEQDSGFFFNMRYFEDMVTNGEWDEVEKYLSGFTKV 63
L +L+ LILQFL E K+K T+HKLEQ++ FFN+ Y +++ GE+ + E+YL FT
Sbjct: 191 LKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGKAEEYLGAFTNW 250
Query: 64 DDNRYSMKIFFEIRKQKYLEALD 86
+DN+YS +F E++K L++ +
Sbjct: 251 EDNKYSKAMFLELQKLICLQSTE 273
Score = 133 (51.9 bits), Expect = 7.7e-46, Sum P(2) = 7.7e-46
Identities = 43/161 (26%), Positives = 82/161 (50%)
Query: 55 KYLSGFTKVDDNRYSMKIFFEIRKQKYL-EALDKRDRAKAVEILVKDLK-VFSAFNEDLF 112
KY + K++ K+FF + YL E + + KA E L + +++ +F
Sbjct: 207 KYKNTLHKLEQET---KVFFNLN---YLAEVMKLGEYGKAEEYLGAFTNWEDNKYSKAMF 260
Query: 113 KEITQLLTLENFRDNEQLSKYG--DTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSR 170
E+ +L+ L++ + E + G D S + + A + L + NP+ +D+L+FPS++ SR
Sbjct: 261 LELQKLICLQS-TEWEVATPSGSLDNMSLKIKLHASVAMLAKKNPVLKDELKFPSMEKSR 319
Query: 171 LRTLINQSLNWQHQLCKNPRANPDIKTLFVDHTCGQPNGAR 211
L TL+ Q+++W C N + ++ V + CG P+ +
Sbjct: 320 LLTLVKQTMDWW--TCNNTSSLENVPV--VSYLCGTPSSMK 356
Score = 42 (19.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASR 690
N+L S D+DG L C+ K + L T+ N + N + V FD +
Sbjct: 547 NVLVSSDSDGKL----CLWSTKSWVKL---TSKNSTRKFCNRSNLESTSLVTHIQFDPYQ 599
Query: 691 V 691
+
Sbjct: 600 I 600
Score = 38 (18.4 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 353 LNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEV 386
L S V + F P Q LLVV + G + L+EV
Sbjct: 584 LESTSLVTHIQFDPYQIELLVV--HDGWIGLYEV 615
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 211 (79.3 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 85/313 (27%), Positives = 141/313 (45%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW + LQ SL + V V +SPDG K+ V L+ G+ L+
Sbjct: 899 TIKVWN--PATGELQQSLEGR-SGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT 955
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+E H SV +AFS KQL+ + D IK+W++ TG Q F+GH+ + ++
Sbjct: 956 ---LEGHSQSVRSVAFSPDGKQLA--SSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVA- 1009
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNK 573
+ + + S + D IK W D S + HS ++ +A+S D +L S
Sbjct: 1010 -FSPDGKHLVSGSDDNTIKLW--DLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL-- 1064
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNL 632
+S + W+ + G ++RT G + V V F + + LA+ + IK W+ L
Sbjct: 1065 --DSTIKLWDSATGELQRTLEG-HSQGVRSVTF-SPDGKLLASNSYDGTIKLWNPLTGEL 1120
Query: 633 LASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVA 692
++ S + F+ +G LA D+ IK+ +A G LL+T+E + V
Sbjct: 1121 QQTLTGRSDWVDS--VAFSPDGKQLASGYYDSTIKLWDSATG-ELLQTLEGHSDRIQSVV 1177
Query: 693 SAAIVKAPAIGTF 705
+ K A G++
Sbjct: 1178 FSPDGKLLASGSY 1190
Score = 205 (77.2 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 73/266 (27%), Positives = 125/266 (46%)
Query: 416 DYTASVNRVMWSPDGT-LFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
++ V V++SPDG L +Y V ++ G+ L+ ++ H G+V LAFS P
Sbjct: 748 NHLGPVESVVFSPDGKQLVSGSYDD-TVKIWDPATGELLQT---LDGHSGTVESLAFS-P 802
Query: 475 NKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC--PHHKENIQFIFSTATDGK 532
+ +L + + D I +WD+ TG FEGH ++S+ P KE + S + D
Sbjct: 803 DGKL-LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE----LASASDDST 857
Query: 533 IKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVK 590
IK W D + HS ++ +A+S DG L S +S + WN + G ++
Sbjct: 858 IKIW--DLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSL----DSTIKVWNPATGELQ 911
Query: 591 RTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI 648
++ G RS V V F + + ++ +K W+ LL +++ G Q+ +
Sbjct: 912 QSLEG---RSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE--GHSQSVRSV 966
Query: 649 RFNKEGILLAVSTNDNGIKILANADG 674
F+ +G LA S++D IK+ + G
Sbjct: 967 AFSPDGKQLASSSSDTTIKLWNSTTG 992
Score = 198 (74.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 85/300 (28%), Positives = 133/300 (44%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ K+W + + LQ + + + V +SPDG + + L+ EL+
Sbjct: 983 TIKLWN--STTGELQQTFKG-HDLWIRAVAFSPDGKHLVSGSDDNTIKLWDL-ATSELQQ 1038
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
LE H SV+ +AFS +KQL+ + D IK+WD+ TG Q EGH V S+
Sbjct: 1039 SLE--DHSRSVHAVAFSPDDKQLA--SSSLDSTIKLWDSATGELQRTLEGHSQGVRSVT- 1093
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNK 573
+ + + S + DG IK W + L + G S + +A+S DG +L S G
Sbjct: 1094 -FSPDGKLLASNSYDGTIKLW--NPLTGELQQTLTGRSDWVDSVAFSPDGKQLAS-GYY- 1148
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNL 632
+S + W+ + G + +T G R VV F + + LA+G + K WD L
Sbjct: 1149 --DSTIKLWDSATGELLQTLEGHSDRIQSVV-F-SPDGKLLASGSYDQTAKLWDPATGEL 1204
Query: 633 LASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVA 692
L + S + F+ +G LLA S+ IK+ G LL+T+ A VA
Sbjct: 1205 LQIFEGHSKWVES--VAFSPDGKLLASSSYGETIKLWDPVTG-ELLQTLNDPDESAGSVA 1261
Score = 172 (65.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 63/237 (26%), Positives = 106/237 (44%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+E H+G V + FS KQL V+ D +K+WD TG +GH V S+
Sbjct: 746 LENHLGPVESVVFSPDGKQL--VSGSYDDTVKIWDPATGELLQTLDGHSGTVESLA--FS 801
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRV--DYDAPGHSSTMMAYSADGARLFSCGTNKEGE 576
+ + + S + D I W D+ + ++ HS +A++ DG L S +
Sbjct: 802 PDGKLLASGSYDNTIDLW--DSATGELLQTFEGHPHSIWSVAFAPDGKELASASD----D 855
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLAS 635
S + W+ + G +++T +SV V F + + LA+ + IK W+ L S
Sbjct: 856 STIKIWDLATGELQQTLDS-HSQSVRSVAF-SPDGKLLASSSLDSTIKVWNPATGELQQS 913
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVA 692
++ G S + F+ +G LA + N +K+ A G LL+T+E + VA
Sbjct: 914 LEGRSGWVKS--VAFSPDGKKLASGSEKNTVKLWNPATG-ELLQTLEGHSQSVRSVA 967
Score = 158 (60.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 69/243 (28%), Positives = 108/243 (44%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ K+W+ + + LQ +L ++ V V +SPDG L + L+ G EL+
Sbjct: 1067 TIKLWD--SATGELQRTLEG-HSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG-ELQQ 1122
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L V+ +AFS KQL+ + D IK+WD+ TG EGH + S+
Sbjct: 1123 TLT--GRSDWVDSVAFSPDGKQLA--SGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV- 1177
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNK 573
+ + + S + D K W D + GHS + +A+S DG L S +
Sbjct: 1178 -FSPDGKLLASGSYDQTAKLW--DPATGELLQIFEGHSKWVESVAFSPDGKLLAS---SS 1231
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
GE+ + W+ G + +T + + S G V F NR LA+ D F K WD LL
Sbjct: 1232 YGETIKL-WDPVTGELLQTLNDPDE-SAGSVAFSPDGNR-LASVDIFDTKIWDPATGELL 1288
Query: 634 ASI 636
++
Sbjct: 1289 QAL 1291
Score = 129 (50.5 bits), Expect = 0.00045, P = 0.00045
Identities = 112/508 (22%), Positives = 208/508 (40%)
Query: 530 DGKIKAWLYDN----LGSR-VDYDAPG--HSSTMMAYSADGA---RLFSCGTNKEGESYL 579
D ++ +LYD L +R + AP +SS +M +S +G+ R+F+ N G S L
Sbjct: 676 DSELSKFLYDARRFVLNNRHLAETAPLQLYSSGLM-FSPEGSITRRIFNY--NLSGWSQL 732
Query: 580 VEWNESEGAVKRTYHG-LGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDA 638
+ ++ A ++T LG V V F + ++ + +K WD LL ++D
Sbjct: 733 PKVEQTWSAEQQTLENHLGP--VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 639 DGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVK 698
G S + F+ +G LLA + DN I + +A G LL+T E VA A K
Sbjct: 791 HSGTVES--LAFSPDGKLLASGSYDNTIDLWDSATG-ELLQTFEGHPHSIWSVAFAPDGK 847
Query: 699 APAIGTFGSANANVGTSLGERTAPAAAMVGMSNDSRNFTDVKPKIADEAVEKS-RIWKLT 757
A + S + GE + S S F+ +A +++ + ++W
Sbjct: 848 ELASASDDSTIKIWDLATGELQQTLDSH-SQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 758 --EITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTGK 815
E+ + + RS + ++ + + + S + L + A +L + S
Sbjct: 907 TGELQQSLEGRSGWVK-SVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRS 965
Query: 816 -ATTNQAPQLWQPPSGILM------TNDISDT-NPEDA-VPCFALSKNDSYVMSASGGK- 865
A + QL S + T ++ T D + A S + +++S S
Sbjct: 966 VAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNT 1025
Query: 866 ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKG 925
I L++ P D + + + DS+I++++ E++ L+G
Sbjct: 1026 IKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL-DSTIKLWDSATGELQRTLEG 1084
Query: 926 HQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASKFLTIPNGRTASALADTRVQF 985
H + + + FS +L S+ D + +W+ E Q + LT GR S D+ V F
Sbjct: 1085 HSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQT--LT---GR--SDWVDS-VAF 1136
Query: 986 HLDQTHLLA-VHETQIAIYEAPKLECLK 1012
D L + +++ I ++++ E L+
Sbjct: 1137 SPDGKQLASGYYDSTIKLWDSATGELLQ 1164
Score = 81 (33.6 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 35/160 (21%), Positives = 62/160 (38%)
Query: 796 SNAVHKLWKWPRNERNSTGKATTNQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKND 855
S +VH + P +++ ++ ++ + +LW +G L + V S +
Sbjct: 1044 SRSVHAVAFSPDDKQLAS--SSLDSTIKLWDSATGELQR---TLEGHSQGVRSVTFSPDG 1098
Query: 856 SYVMSAS-GGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNV 914
+ S S G I L+N P D +A G DS+I++++
Sbjct: 1099 KLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLWDS 1157
Query: 915 RVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
E+ L+GH RI + FS +L S D +W
Sbjct: 1158 ATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW 1197
Score = 76 (31.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 29/133 (21%), Positives = 50/133 (37%)
Query: 823 QLWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 881
+LW P +G L + T D V A S + + S I L++
Sbjct: 1111 KLWNPLTGELQQ---TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLE 1167
Query: 882 XXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNV 941
P D ++A G D + ++++ E+ +GH K + +AFS +
Sbjct: 1168 GHSDRIQSVVFSP-DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKL 1226
Query: 942 LVSSGADSQLCVW 954
L SS + +W
Sbjct: 1227 LASSSYGETIKLW 1239
Score = 66 (28.3 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 41/184 (22%), Positives = 75/184 (40%)
Query: 819 NQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXX 877
+Q +LW P +G L+ I + + + V A S + + S+S G+ I L++
Sbjct: 1191 DQTAKLWDPATGELL--QIFEGHSK-WVESVAFSPDGKLLASSSYGETIKLWDPVTGELL 1247
Query: 878 XXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSN 937
P N + ++ + D+ +I++ E+ LKGH K + +S
Sbjct: 1248 QTLNDPDESAGSVAFSPDGNRLASVDIFDT--KIWDPATGELLQALKGHSKWV----WSR 1301
Query: 938 TLNVLVSSGADSQLCVWSTDG-WEKQASK-F-LTIPNGRTASALADTRVQFHLDQTHLLA 994
T +S D LC+ W Q+ + F +++ +G + RV F L+
Sbjct: 1302 T-GAGISIFLDQWLCLQEKRILWLPQSYQPFCISVNDGVLVLGHSSGRVSFIQGPRFLIE 1360
Query: 995 VHET 998
ET
Sbjct: 1361 SEET 1364
Score = 39 (18.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 322 SVNILPVAYTP---QSLGQSSYSTDDLPKTVVMTLNQ---GSA--VKSMDFHPVQQILLV 373
S ++ VA++P Q SS +T L + L Q G ++++ F P + L V
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHL-V 1018
Query: 374 VGTNMGDVMLWEVGSRE 390
G++ + LW++ + E
Sbjct: 1019 SGSDDNTIKLWDLATSE 1035
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 119 (46.9 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 55/186 (29%), Positives = 85/186 (45%)
Query: 5 SRELVFLILQFLDEEKFKETVHKLEQDSGFFFNM----RYFEDMVTNGEWDEVEKYLSGF 60
S++++ LILQFL E ++ L++++G N F + V NG WD V
Sbjct: 16 SQDVIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDVKNGNWDSV------L 69
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLT 120
T V R S + ++ +Q +E L K E+ ++ N + + L
Sbjct: 70 TVVSTLRLSTTLLMDLYEQ-IVELL----HLKEYELCKYLIRKTEPLNYMKLNQQERYLK 124
Query: 121 LENFRDNEQLSKYGDTKSARGIMLAELKK-LIEANPLFRDKLQFPSLKNSRLRTLINQSL 179
LEN E + GD GI + +K LIE L + + PS SRL +L++QSL
Sbjct: 125 LENHLQREYID-LGDFYKY-GITTEKRRKQLIEQ--LNNEIITVPS---SRLLSLLSQSL 177
Query: 180 NWQ-HQ 184
+WQ HQ
Sbjct: 178 HWQKHQ 183
Score = 112 (44.5 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 398 KVWEL--GACSMPLQASLSSDYTASVNRVM---WSPDGTLFGVAYSKHIVHLYTYHGGDE 452
+VW+ G S L + D+ + ++ +S DG + + ++ G
Sbjct: 250 EVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKC 309
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
LR E AH V L FS + Q +++ D +K+ +G IF GH+S V
Sbjct: 310 LRK-FE-PAHTNGVTCLQFSRNSTQ--ILSGSFDSSLKIHGLKSGKALKIFRGHQSFVND 365
Query: 513 ICPHHKENIQFIFSTATDGKIKAW 536
C +H E+ + S ++DGKIK W
Sbjct: 366 CCFNHDEDR--VISCSSDGKIKIW 387
Score = 92 (37.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 31/162 (19%), Positives = 68/162 (41%)
Query: 843 EDAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIA 901
+DA+ C A SK+ ++ + S KI ++ +++ I
Sbjct: 275 DDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQIL 334
Query: 902 IGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEK 961
G DSS++I+ ++ + +GHQ + F++ + ++S +D ++ +W D
Sbjct: 335 SGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIW--DAKSS 392
Query: 962 QASKFLTIPNGRTASALADTRVQFHLDQTHLLAV-HETQIAI 1002
+ +T + T ++ + L L V + +QI+I
Sbjct: 393 DCLQTITPTSVVTVRDISIRSITILLKNPEFLLVCNSSQISI 434
Score = 91 (37.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 40/176 (22%), Positives = 80/176 (45%)
Query: 469 LAFSYPNKQLSVVTCGEDRVIKVWDAVTG--TKQYIFEGHESPVYS----ICPHHKENIQ 522
+ FS +K L +T D I+VWD TG +K ++ ++ + +C ++ +
Sbjct: 231 IKFSPDSKYL--LTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGE 288
Query: 523 FIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLV 580
F+ + + D KIK W + G + P H++ T + +S + ++ S G+ +S L
Sbjct: 289 FLATGSLDNKIKVWQIKS-GKCLRKFEPAHTNGVTCLQFSRNSTQILS-GSF---DSSLK 343
Query: 581 EWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
G + + G + V F+ ++R ++ + IK WD + + L +I
Sbjct: 344 IHGLKSGKALKIFRG-HQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTI 398
Score = 80 (33.2 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 20/108 (18%), Positives = 45/108 (41%)
Query: 851 LSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXX-XXHPQDNNIIAIGMEDSSI 909
L KN +++ + +IS+ + P N + A+ ED+ +
Sbjct: 417 LLKNPEFLLVCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVD-EDNIL 475
Query: 910 QIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
++ + K K H + + ++ T N+L ++G+D L +W ++
Sbjct: 476 YTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWKSN 523
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 47/246 (19%), Positives = 94/246 (38%)
Query: 398 KVWEL--GACSMPLQASLSSDYTASVNRVMWSPDGT-LFGVAYSKHIVHLYTYHGGDELR 454
KVW++ G C + + +T V + +S + T + ++ + ++ G L+
Sbjct: 300 KVWQIKSGKCLRKFEPA----HTNGVTCLQFSRNSTQILSGSFDSSL-KIHGLKSGKALK 354
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTG------TKQYIFEGHES 508
H VND F++ + V++C D IK+WDA + T + +
Sbjct: 355 I---FRGHQSFVNDCCFNHDEDR--VISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDI 409
Query: 509 PVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFS 568
+ SI K N +F+ +I + + + +S T + + + +
Sbjct: 410 SIRSITILLK-NPEFLL-VCNSSQISIVSMKSQTISKTFTSE-NSKTFLVCTLSPLQNYL 466
Query: 569 CGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDM- 627
+++ Y ++N K H + V + TKN G + ++K W
Sbjct: 467 YAVDEDNILYTFDFNSGSLLNKFKIHD---QEVISISHHPTKNLLATTGSDCLLKIWKSN 523
Query: 628 --DNVN 631
DN+N
Sbjct: 524 SNDNIN 529
Score = 67 (28.6 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 25/91 (27%), Positives = 37/91 (40%)
Query: 598 KRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI---DADGGLQ---ASPCIRFN 651
K ++F L + I+ WD + L S+ D + A CI F+
Sbjct: 225 KNKPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFS 284
Query: 652 KEGILLAVSTNDNGIKILANADGIRLLRTVE 682
K+G LA + DN IK+ G + LR E
Sbjct: 285 KDGEFLATGSLDNKIKVWQIKSG-KCLRKFE 314
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 193 (73.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 75/300 (25%), Positives = 130/300 (43%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+ A+V V +S D L A V ++ G L++ LE H V + FS+ ++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGS-LQHTLE--GHSDLVRSVIFSHDSR 351
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L+ + D +K+WD TG+ Q+ EGH V S+ H Q + S + D +K W
Sbjct: 352 LLASAS---DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS--QLLASASDDSTVKIW 406
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + + GH + + +S D L S +S + W+ G+++ T
Sbjct: 407 --DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASD----DSTVKIWDTGTGSLQHTLE 460
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEG 654
G + V V F +A D+ ++ WD + + +++ L S + F+ +
Sbjct: 461 G-HRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTS--VSFSHDS 517
Query: 655 ILLAVSTNDNGIKIL-ANADGIR----LLRTVESRTFD-ASRVASAAIVKAPAIGTFGSA 708
LLA ++ND ++I A ++ L T+E+ FD A+ + VKA G A
Sbjct: 518 RLLASASNDQTVRIWDIEARSLQHTFDLDATIEAMRFDKATSLWIQVTVKASIRSAMGMA 577
Score = 184 (69.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 66/260 (25%), Positives = 117/260 (45%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
++ K+W+ S LQ +L ++ V V++S D L A S V ++ G L+
Sbjct: 318 RTVKIWDTETGS--LQHTLEG-HSDLVRSVIFSHDSRLLASA-SDSTVKIWDT-GTGSLQ 372
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ LE H V + FS+ ++ L+ + +D +K+WD TG+ Q+ EGH V S+
Sbjct: 373 HTLE--GHRDWVRSVIFSHDSQLLA--SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 428
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTN 572
H Q + S + D +K W D + + GH + + +S D L S +
Sbjct: 429 FSHDS--QLLASASDDSTVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDD 484
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL 632
+ W+ +G+ K T G V V F +A ++ ++ WD++ +L
Sbjct: 485 RTVRI----WDTEKGSHKHTLEGHSSL-VTSVSFSHDSRLLASASNDQTVRIWDIEARSL 539
Query: 633 LASIDADGGLQASPCIRFNK 652
+ D D ++A +RF+K
Sbjct: 540 QHTFDLDATIEA---MRFDK 556
Score = 175 (66.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 51/212 (24%), Positives = 99/212 (46%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+E H +V +++S+ ++ L+ + +DR +K+WD TG+ Q+ EGH V S+ H
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLA--SASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD 349
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGE 576
+ ++A+D +K W D + + GH + + +S D L S +
Sbjct: 350 SRL---LASASDSTVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASD----D 400
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
S + W+ G+++ T G + V V F +A D+ +K WD +L ++
Sbjct: 401 STVKIWDTGTGSLQHTLEG-HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL 459
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ S + F+ + LLA +++D ++I
Sbjct: 460 EGHRDWVRS--VIFSHDSRLLASASDDRTVRI 489
Score = 88 (36.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D+ ++A +D +++I++ K L+GH +T ++FS+ +L S+ D + +W
Sbjct: 474 DSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Query: 956 TD 957
+
Sbjct: 534 IE 535
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 190 (71.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 75/267 (28%), Positives = 111/267 (41%)
Query: 396 SFKVWEL--GACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDEL 453
+ + WE G CS +Q D + VNR+ SPD A H V LY +
Sbjct: 13 TIRFWEALSGICSRTIQ---HPD--SQVNRLCISPDKRFLAAA-GHHTVKLYDIKSTNP- 65
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
L E H G+V +AF K + VT ED +K+W+ TGT Q + H+SPV +
Sbjct: 66 NALLTFEGHTGNVTGVAFHCEGKWM--VTSSEDGTVKIWETRTGTIQRSYN-HQSPVNDV 122
Query: 514 CPHHKENIQFIFSTATDGKIKAW-LYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
H + I S G I+ W L DN + S + + + DG+ L C N
Sbjct: 123 VIHPNQGE--IISCDRAGTIRLWDLADNKCTSEMVPEEDVSVSSLTVATDGSLL--CAAN 178
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQF---DTTKNRFLAAGDEFMIKFWDMDN 629
G ++ W S+G ++RT + + QF D R L + D + D+
Sbjct: 179 NRGNVFV--WTLSQG-LERTI------ATAMTQFSAHDQYITRVLLSPDVKKLATCSADH 229
Query: 630 VNLLASIDADGGLQASPCIRFNKEGIL 656
+ +D + LQA + F E L
Sbjct: 230 TAKIWEVDVEPTLQAGKAVPFELEATL 256
Score = 48 (22.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 918 EVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASKFLTIPNGRTASA 977
E++ L HQ+ + AFS LV++ +D +W E Q+ + NG A
Sbjct: 251 ELEATLANHQRWVWDCAFSADSAYLVTACSDHYARLW-----ELQSQAIIRTYNGHHRGA 305
Query: 978 L 978
+
Sbjct: 306 V 306
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 211 (79.3 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 71/277 (25%), Positives = 129/277 (46%)
Query: 398 KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
K+W+ S LQ L + VN V +SPD L A V ++ G R
Sbjct: 414 KIWDTRTGS--LQNVLEG-HDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRT-- 468
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHH 517
+E H V + FS+ ++ ++ + +D +K+WD T Q E H++ V S+ H
Sbjct: 469 -LEGHNDWVRSVVFSHDSRLIA--SASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEG 575
+ + S + D +K W D ++ GH + +++S D +RL + ++ +G
Sbjct: 526 DSRL--LASASDDMTVKIW--DTATGSLENTLEGHDDRVNSVSFSPD-SRLLASASD-DG 579
Query: 576 ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
+ W + G V+ T+ G G+ ++ + F T N +A D+ +K WDM+ +L +
Sbjct: 580 TVKI--WYAATGTVQHTFDGSGRVAISLA-FSHTSNLLASAMDDGTVKIWDMEIYSLRHT 636
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANA 672
D D +Q I+F+K + ++ TN I++ A +
Sbjct: 637 FDLDHEIQR---IQFDKS--MSSLITNVGRIQLDARS 668
Score = 171 (65.3 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 70/299 (23%), Positives = 126/299 (42%)
Query: 397 FKVWEL-GACSMPLQASLSS---------DYTASVNRVMWSPDGTLFGVAYSKHIVHLYT 446
F +W + G PLQ S+ + +V V +S D L A V ++
Sbjct: 232 FALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWD 291
Query: 447 YHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGH 506
L+N LE H V + FS+ ++ L+ + +D +K+WD TGT Q + +GH
Sbjct: 292 T-ATSFLQNTLE--GHNEWVKSVVFSHDSRLLA--SASDDGTVKIWDTATGTLQRMLKGH 346
Query: 507 ESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGA 564
V S+ H + I S + D ++ W + + + H ++MA ++ D
Sbjct: 347 NDSVRSVVFSHDSRL--IASGSNDRTVRIW--ETTTGLLRHTFEDHEDSVMAVSFAHDSR 402
Query: 565 RLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKF 624
RL S +G + + W+ G+++ G V V F +A D+ +K
Sbjct: 403 RLASAS---DGGNVKI-WDTRTGSLQNVLEGHDD-CVNSVSFSPDSRLLASASDDRTVKI 457
Query: 625 WDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVES 683
W +L +++ S + F+ + L+A +++D +KI A + L +ES
Sbjct: 458 WHAATGSLQRTLEGHNDWVRS--VVFSHDSRLIASASDDMTVKIWDTAT-VPLQNNLES 513
Score = 171 (65.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 78/290 (26%), Positives = 136/290 (46%)
Query: 409 LQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVND 468
LQ L + SV V++S D L + V ++ G L H E H SV
Sbjct: 339 LQRMLKG-HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG--LLRHT-FEDHEDSVMA 394
Query: 469 LAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTA 528
++F++ +++L+ + G + +K+WD TG+ Q + EGH+ V S+ + + + S +
Sbjct: 395 VSFAHDSRRLASASDGGN--VKIWDTRTGSLQNVLEGHDDCVNSVS--FSPDSRLLASAS 450
Query: 529 TDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESE 586
D +K W + GS + GH+ + + +S D +RL + ++ + + W+ +
Sbjct: 451 DDRTVKIW-HAATGS-LQRTLEGHNDWVRSVVFSHD-SRLIASASD---DMTVKIWDTAT 504
Query: 587 GAVKRTY--HGLGKRSVGVVQFDTTKNRFLA-AGDEFMIKFWDMDNVNLLASIDADGGLQ 643
++ H RSV V D+ R LA A D+ +K WD +L +++
Sbjct: 505 VPLQNNLESHDNWVRSV-VFSHDS---RLLASASDDMTVKIWDTATGSLENTLEGHDDRV 560
Query: 644 ASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDAS-RVA 692
S + F+ + LLA +++D +KI A G TV+ TFD S RVA
Sbjct: 561 NS--VSFSPDSRLLASASDDGTVKIWYAATG-----TVQ-HTFDGSGRVA 602
Score = 88 (36.0 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++A +D +++I++ ++ L+GH R+ ++FS +L S+ D + +W
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 80 (33.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D+ +IA +D +++I++ ++ L+ H + + FS+ +L S+ D + +W
Sbjct: 484 DSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD 543
Query: 956 T 956
T
Sbjct: 544 T 544
Score = 78 (32.5 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D+ ++A +D +++I+ V+ G + LAFS+T N+L S+ D + +W
Sbjct: 568 DSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Query: 956 TD 957
+
Sbjct: 628 ME 629
Score = 37 (18.1 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 898 NIIAIGMEDSSIQ 910
NI GME++S+Q
Sbjct: 1184 NIFKQGMEENSVQ 1196
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 124 (48.7 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 7 ELVFLILQFLDEEKFKETVHKLEQDSGFFFN---MRYFEDMVTNGEWDEVEKYLSGFTKV 63
E V +I + L + +T LE++SG + ++ F V +G+WD+ K L
Sbjct: 67 EFVRIITRALYSLGYDKTGAMLEEESGISLHNSTIKLFLQQVKDGKWDQSVKTLHRIGFP 126
Query: 64 DDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLTLEN 123
D+ F + +QK+LE L A A+ L ++ + + + + L++ +
Sbjct: 127 DEKAVKAASFL-LLEQKFLEFLKVEKIADALRTLRNEMAPLRINTKRVHELASSLISPSS 185
Query: 124 FRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQH 183
F + + ++ ++R +L EL+ L+ A+ + +K RL L+ SL+ Q
Sbjct: 186 FISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEK---------RLECLVENSLHIQR 236
Query: 184 QLCK-NPRANPDIKTLFVDHTCGQ 206
C + + D+ +L+ DH CG+
Sbjct: 237 DSCVFHNTLDSDL-SLYSDHQCGK 259
Score = 85 (35.0 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 29/128 (22%), Positives = 54/128 (42%)
Query: 843 EDAVPCFALSKNDSYVM-SASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXH---PQDNN 898
ED + F+LS ++ Y++ + +I L+N
Sbjct: 443 EDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQA 502
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNT-LNVLVSSGADSQLCVWSTD 957
IA G EDS + I++ ++ +L GH + +++S T L++L S+ D + +W D
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Query: 958 GWEKQASK 965
+Q K
Sbjct: 563 RINQQNQK 570
Score = 84 (34.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/170 (23%), Positives = 73/170 (42%)
Query: 466 VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF 525
V+D+A + K L V C +D VI ++D ++ I E +S+ +K +I
Sbjct: 406 VSDIAMTDDGKWL-VSVC-KDSVISLFDREATVERLIEEEDMITSFSLSNDNK----YIL 459
Query: 526 STATDGKIKAWLYDNLGSRVDYDAPGHS-STMMAYSADGA--RLFSCGTNKEGESYLVEW 582
+ +I+ W + ++ GH S + S G + F +++ + Y+ W
Sbjct: 460 VNLLNQEIRLWNIEG-DPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYI--W 516
Query: 583 NESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLA-AGDEFMIKFWDMDNVN 631
+ S G + G +V V + T LA A D+ I+ W +D +N
Sbjct: 517 HRSTGKLIVELPGHAG-AVNCVSWSPTNLHMLASASDDGTIRIWGLDRIN 565
Score = 80 (33.2 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 401 ELGACSMPLQ-ASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEI 459
+ G +P Q A + +T V + +S +G + ++ + +
Sbjct: 256 QCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTL 315
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE-GHESPVYSICPHHK 518
H V + +S ++Q V+TCG + VI+ WD +G +++E G SP+ C +
Sbjct: 316 VGHHKPVIAILWSPDDRQ--VLTCGAEEVIRRWDVDSGDCVHMYEKGGISPIS--CGWYP 371
Query: 519 ENIQFIFSTATDGKIKAWLYD 539
+ Q I + TD I W D
Sbjct: 372 DG-QGIIAGMTDRSICMWDLD 391
Score = 71 (30.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 476 KQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKA 535
KQ + + ED + +W TG GH V + N+ + S + DG I+
Sbjct: 500 KQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVS-WSPTNLHMLASASDDGTIRI 558
Query: 536 WLYDNLGSR 544
W D + +
Sbjct: 559 WGLDRINQQ 567
Score = 58 (25.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVW--DAVT--GTKQYIFEGHES 508
+E+ H G+VN +++S N + + + +D I++W D + K+ + +G S
Sbjct: 525 VELPGHAGAVNCVSWSPTNLHM-LASASDDGTIRIWGLDRINQQNQKKKLVQGSSS 579
Score = 56 (24.8 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRV-DEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P D ++ G E+ I+ ++V D V KG I+ + + ++ D +C
Sbjct: 329 PDDRQVLTCGAEEV-IRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGM-TDRSIC 386
Query: 953 VWSTDGWEKQASK 965
+W DG EK+ K
Sbjct: 387 MWDLDGREKECWK 399
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 900 IAIGMEDSSIQIYNVRVD---EVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+A +D + I+ + D +K L GH K + + +S +++ GA+ + W
Sbjct: 289 LASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDV 348
Query: 957 D 957
D
Sbjct: 349 D 349
Score = 53 (23.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 23/107 (21%), Positives = 55/107 (51%)
Query: 557 MAYSADGARLFSCGTNKEGESYLVEWNESEG--AVKRTYHGLGKRSVGVVQFDTTKNRFL 614
+ +S +G L S ++K+ + + E + ++G ++K T G K + ++ + + L
Sbjct: 280 LQFSHNGKYLAS--SSKDQTAIIWEIS-ADGHISLKHTLVGHHKPVIAIL-WSPDDRQVL 335
Query: 615 AAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRF-NKEGILLAVS 660
G E +I+ WD+D+ + + + GG+ C + + +GI+ ++
Sbjct: 336 TCGAEEVIRRWDVDSGDCVHMYEK-GGISPISCGWYPDGQGIIAGMT 381
Score = 51 (23.0 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ-KRITGLAFSNTLNVLVSSGADSQL 951
+P IIA GM D SI ++++ E K KG + ++++ +A ++ LVS DS +
Sbjct: 370 YPDGQGIIA-GMTDRSICMWDLDGRE-KECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVI 427
Query: 952 CVWSTD 957
++ +
Sbjct: 428 SLFDRE 433
Score = 51 (23.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 923 LKGHQKRITGLAFSNTLNVLVSSGADSQLCVW--STDG 958
L+ H + L FS+ L SS D +W S DG
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADG 307
Score = 47 (21.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 625 WDMDNVNLLASIDADGGLQASPCIRFNKEGIL--LAVSTNDNGI 666
W N+++LAS DG ++ R N++ L ++ NG+
Sbjct: 539 WSPTNLHMLASASDDGTIRIWGLDRINQQNQKKKLVQGSSSNGV 582
Score = 47 (21.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQAS 964
+DS I +++ R V+ +L + IT + SN ++ + + ++ +W+ +G K S
Sbjct: 423 KDSVISLFD-REATVE-RLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVS 480
Query: 965 KF 966
++
Sbjct: 481 RY 482
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 140 (54.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 52/218 (23%), Positives = 93/218 (42%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + V S D F+ NKQL+ +C D+ + +W+ + + F GH +
Sbjct: 10 LERHFKGHKDVISCAD--FNPNNKQLATGSC--DKSLMIWNLAPKARAFRFVGHTDVITG 65
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
+ + + + S++ D ++ W G + A S + +S DG RL + +
Sbjct: 66 V--NFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDD 123
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNV 630
K + + VE K+ + L + + V +F + GD+ ++ WD +
Sbjct: 124 KSVKVWGVER-------KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSH 176
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ +I D G A+ + FN G +A S DN IKI
Sbjct: 177 QCI-NIFTDYGGSAT-FVDFNSSGTCIASSGADNTIKI 212
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/223 (22%), Positives = 97/223 (43%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H + + F+ P+ L V + D+ +++W + +F+ H + V S+ H +
Sbjct: 59 HTDVITGVNFA-PSGSL-VASSSRDQTVRLWTPSIKGESTVFKAHTASVRSV--HFSRDG 114
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYL 579
Q + + + D +K W + + Y H++ + +S DG + SCG ++
Sbjct: 115 QRLVTASDDKSVKVWGVER--KKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRL-- 170
Query: 580 VEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDA- 638
W+ S + G S V F+++ ++G + IK WD+ L+
Sbjct: 171 --WDTSSHQCINIFTDYGG-SATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH 227
Query: 639 DGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTV 681
+ G+ C F+ G L ++D+ IKIL +G RL+ T+
Sbjct: 228 NAGVN---CFSFHPSGNYLISGSSDSTIKILDLLEG-RLIYTL 266
Score = 131 (51.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 57/276 (20%), Positives = 114/276 (41%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
KS +W L + + +D VN ++P G+L + V L+T ++
Sbjct: 40 KSLMIWNLAPKARAFRFVGHTDVITGVN---FAPSGSLVASSSRDQTVRLWT----PSIK 92
Query: 455 NHLEI-EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
+ +AH SV + FS ++L VT +D+ +KVW K++++ + +
Sbjct: 93 GESTVFKAHTASVRSVHFSRDGQRL--VTASDDKSVKVWGVER--KKFLYSLNRHTNWVR 148
Query: 514 CPHHKENIQFIFSTATDGKIKAW---LYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCG 570
C + + I S D ++ W + + DY G S+T + +++ G + S G
Sbjct: 149 CARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY---GGSATFVDFNSSGTCIASSG 205
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNV 630
+ + + + N+ K H G V F + N ++ + IK D+
Sbjct: 206 ADNTIKIWDIRTNKLIQHYK--VHNAG---VNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
L+ ++ G + + F+++G L A D+ +
Sbjct: 261 RLIYTLHGHKGPVLT--VTFSRDGDLFASGGADSQV 294
Score = 101 (40.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I+ G DS+I+I ++ + L GH+ + + FS ++ S GADSQ+
Sbjct: 237 HPSGNYLIS-GSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVL 295
Query: 953 VWSTD 957
+W T+
Sbjct: 296 MWKTN 300
Score = 63 (27.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
IA D++I+I+++R +++ K H + +F + N L+S +DS +
Sbjct: 201 IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTI 252
Score = 54 (24.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/88 (19%), Positives = 31/88 (35%)
Query: 846 VPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGME 905
V CF+ + +Y++S S +D ++ A G
Sbjct: 231 VNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGA 290
Query: 906 DSSIQIYNVRVDEVKTK--LKGHQKRIT 931
DS + ++ D + + L H KR+T
Sbjct: 291 DSQVLMWKTNFDSLNYRELLSKHSKRVT 318
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 149 (57.5 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 50/213 (23%), Positives = 100/213 (46%)
Query: 420 SVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLS 479
S++ V +SPDG A + + ++ + G R +E H ++D+A+S +K
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT---LEGHKEGISDIAWSQDSKL-- 102
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+ + +D+ IK+WD +G +GH+ V+ + + + N+ I S + D ++ W
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNL--IVSGSFDENVRIWDV- 159
Query: 540 NLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLG 597
N G + HS T + ++ DG + S G+ +G + W+ + G + T
Sbjct: 160 NTGECTKMIS-AHSDPVTGVHFNRDGTLVVS-GSY-DGTVRI--WDTTTGQLLNTISTED 214
Query: 598 KRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDN 629
+ V V+F + +F+ AG + ++ W +N
Sbjct: 215 GKEVSFVKF-SPNGKFVLAGTLDNTLRLWSYNN 246
Score = 143 (55.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 49/223 (21%), Positives = 95/223 (42%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
++ H+ S++ + FS K L+ + D+ IK+W A G + EGH+ + I
Sbjct: 42 LKGHLKSISSVKFSPDGKWLA--SASADKTIKIWGAYDGKFERTLEGHKEGISDIA--WS 97
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADG-ARLFSCGTNKEGES 577
++ + I S + D IK W ++ G V GH + S + + L G+ E
Sbjct: 98 QDSKLICSASDDKTIKIWDVES-GKMVK-TLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 578 YLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASID 637
W+ + G + GV F+ ++ + ++ WD LL +I
Sbjct: 156 I---WDVNTGECTKMISAHSDPVTGV-HFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIS 211
Query: 638 ADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRT 680
+ G + S ++F+ G + T DN +++ + + + L+T
Sbjct: 212 TEDGKEVS-FVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKT 253
Score = 112 (44.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 45/196 (22%), Positives = 81/196 (41%)
Query: 500 QYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYDNLGSRVDYDAPGHSSTM-- 556
+Y +GH + S+ + +++ S + D IK W YD R GH +
Sbjct: 39 KYTLKGHLKSISSV--KFSPDGKWLASASADKTIKIWGAYDGKFERT---LEGHKEGISD 93
Query: 557 MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAA 616
+A+S D + S +K + W+ G + +T G K V V F+ N ++
Sbjct: 94 IAWSQDSKLICSASDDKT----IKIWDVESGKMVKTLKG-HKEYVFGVSFNPQSNLIVSG 148
Query: 617 GDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIR 676
+ ++ WD++ I A + FN++G L+ + D ++I G +
Sbjct: 149 SFDENVRIWDVNTGECTKMISAHSDPVTG--VHFNRDGTLVVSGSYDGTVRIWDTTTG-Q 205
Query: 677 LLRTVESRTFDASRVA 692
LL T+ T D V+
Sbjct: 206 LLNTIS--TEDGKEVS 219
Score = 104 (41.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
QD+ +I +D +I+I++V ++ LKGH++ + G++F+ N++VS D + +W
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 955 STDGWE 960
+ E
Sbjct: 158 DVNTGE 163
Score = 81 (33.6 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGA---DSQLCVW 954
I G ED+ I IYN++ E+ L GH+ + +A T N+ ++SGA D + +W
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENI-IASGALEKDRSVKIW 332
Score = 60 (26.2 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASR 690
N + G L++ ++F+ +G LA ++ D IKI DG + RT+E S
Sbjct: 35 NYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDG-KFERTLEGHKEGISD 93
Query: 691 VA 692
+A
Sbjct: 94 IA 95
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 138 (53.6 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 45/209 (21%), Positives = 88/209 (42%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H ++ L FS KQ++ + D + VW+ ++ Y F GH+ V C
Sbjct: 15 KGHRDAITSLDFSPSGKQIA--SGSVDASVMVWNMKPQSRAYRFTGHKDAV--TCVQFSP 70
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYL 579
+ + S++ D ++ W+ G V + A S + +SADG L T + +S
Sbjct: 71 SAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLL---TASDDQSIK 127
Query: 580 VEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDAD 639
+ W+ + T V +F ++ D+ +K WD + L+ +
Sbjct: 128 L-WSVHRQKIICTLRE-HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEP 185
Query: 640 GGLQASPCIRFNKEGILLAVSTNDNGIKI 668
GG S + F+ +A +++DN +++
Sbjct: 186 GGY--SSYVDFHPSSTCIATASSDNTVRV 212
Score = 127 (49.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 55/239 (23%), Positives = 101/239 (42%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W S+ ++ L +T SV V +S DG A + L++ H +
Sbjct: 82 KTVRLW---VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKII- 137
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ H V FS P+ QL +V+ +DR +K+WDA ++Q I E YS
Sbjct: 138 --CTLREHNNWVRCARFS-PDGQL-MVSVSDDRTVKLWDA--SSRQLIHTFCEPGGYSSY 191
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKE 574
+ I + ++D ++ W Y + +++ G L + +
Sbjct: 192 VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASS--- 248
Query: 575 GESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFW--DMDNVN 631
+S L + EG + T HG + S V F + ++F +AG + + W + D+V+
Sbjct: 249 -DSTLKILDLLEGRLLYTLHG-HQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVD 305
Score = 94 (38.1 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N+++ DS+++I ++ + L GHQ + ++FS + + S+G+D Q+
Sbjct: 237 HPSGNHLLTAS-SDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVM 295
Query: 953 VWSTDGWEKQASKFLTIPNG-RTASALA 979
VW T+ S+ L RT SA A
Sbjct: 296 VWRTNFDSVDYSRVLQQKRDHRTPSAQA 323
Score = 38 (18.4 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 990 THLLAVHETQIAIYEAPKLECLKQ 1013
T +A+ E ++ + E ECL+Q
Sbjct: 385 TQTVAILEQRLTLTEDKLKECLEQ 408
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 121 (47.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 5 SRELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYLSGFT 61
++E++ LI Q+L + ++V L +SG + + F + V G+W + + L
Sbjct: 97 NQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDLKDLE 156
Query: 62 KVDDNRYSMKIF---FEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQL 118
+ DN I F + +QKYLE LD + A+ +L +L N +++
Sbjct: 157 PLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSELTPLQ-HNITRVHQLSSY 215
Query: 119 LTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNS--RLRTLIN 176
+ +D Q +K+ +GI+ L ++E F PS+ S RLRTL+
Sbjct: 216 MMCSTNQDLYQRAKW----EGKGILSRAL--VMERLQTFMP----PSVMMSPRRLRTLLQ 265
Query: 177 QSLNWQHQLCK-NPRA---NPDIKTLFVDHTC 204
Q++ Q Q C + A N + +L DH C
Sbjct: 266 QAVELQSQHCPCHDMAWETNLETVSLLTDHCC 297
Score = 112 (44.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 76/334 (22%), Positives = 143/334 (42%)
Query: 341 STDDLP-KTVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKV 399
+TD P +T+ + + V F P + L G+ V++W+V ++ +K +V
Sbjct: 298 TTDGFPMQTIQILTDHCDEVWFCKFSP-DGLKLATGSKDSTVIIWDVDPY-KLTLKHRRV 355
Query: 400 WELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEI 459
+ G QA LS V+ V WSPD L V ++ LY ++ D L +
Sbjct: 356 LD-G------QAQLS------VSFVSWSPDSKLILVGGTEDSHELYIWNVDD---GKLVV 399
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDR-VIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+ + LA ++ + CG + + + D + GT +EG V SI
Sbjct: 400 KFSQSLEDSLACGAFSRDGARFVCGGQKGQLYLCD-LNGTIVDSWEGVR--VNSIA-FRA 455
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-RLFSCGTNKEGES 577
+N + I + +I+ + +D+ R D+D +M +S + A RL + +G
Sbjct: 456 DN-KTILAADNHYRIRGYNFDS--PRSDFDILREPHPIMTFSINSADRLALLNVSNQG-- 510
Query: 578 YLVEWNESEGAVKRTYHGLGKRSVGVVQ-FDTTKNRFLAAGDEFMIKF-WDMDNVNLLAS 635
L W+ + + R + G+ + + + F F+A+G E + + W + LA
Sbjct: 511 -LHLWDIEDKCLVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWHIKREEPLAK 569
Query: 636 IDADGGLQASPCIRFNKE-GILLAVSTNDNGIKI 668
+ G + C+ +N LLA +++D ++I
Sbjct: 570 LA--GHTKTVNCVSWNPVYPSLLASASDDATVRI 601
Score = 79 (32.9 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTL-NVLVSSGADSQLCVW 954
+ + +A G ED + I++++ +E KL GH K + ++++ ++L S+ D+ + +W
Sbjct: 543 NESFVASGSEDKVVYIWHIKREEPLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRIW 602
Score = 51 (23.0 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA---FSNTLNVLVSSGADSQLC 952
D+ +I +G + S ++Y VD+ K +K Q LA FS V G QL
Sbjct: 372 DSKLILVGGTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFVCGGQKGQLY 431
Query: 953 VWSTDG 958
+ +G
Sbjct: 432 LCDLNG 437
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 149 (57.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 62/262 (23%), Positives = 114/262 (43%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + ++ G++L LEI+AH V AFS ++
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDR 678
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF-STAT-DGKIK 534
+ TC D+ +K+W+++TG ++++ H V C H N ++ +TA+ D +K
Sbjct: 679 --FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYLLLATASSDCFLK 734
Query: 535 AWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEW-NESEGA-VKRT 592
W + R +S +S D L SC + + + V+ NE + VK+
Sbjct: 735 LWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQF 794
Query: 593 YHGLGK--RSVGVV----QFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASP 646
+ + + V+ + R + A I W+MD+ +A D G L
Sbjct: 795 FLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKN-KIFLWNMDSCLKVA--DCRGHLSWVH 851
Query: 647 CIRFNKEGILLAVSTNDNGIKI 668
C+ F+ +G S++D I++
Sbjct: 852 CVMFSPDGSSFLTSSDDQTIRL 873
Score = 131 (51.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 52/231 (22%), Positives = 97/231 (41%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 615 SRLVVRPHTDAVYHACFSEDGQRIA--SCGVDKTLQVFKAETGEKLLEIKAHEDEV--LC 670
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVD-YDAPGHSSTM-MAYSADGARLFSCGTN 572
+ +FI + + D K+K W G V YD HS + + + + T
Sbjct: 671 CAFSTDDRFIATCSVDKKVKIW-NSMTGGLVHVYDE--HSEQVNCCHFTNNSHYLLLAT- 726
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL 632
+ +L W+ ++ + T G SV +F + + +K WD+ + N
Sbjct: 727 ASSDCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE 785
Query: 633 LASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVES 683
SI+ S + + E I+ S + +G +I+ A L ++S
Sbjct: 786 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDS 836
Score = 90 (36.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
IA G ED +++I + + + GH+K + + F++ L+SS DS + VW+ W
Sbjct: 941 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 997
Query: 960 EKQASKFL 967
+ + FL
Sbjct: 998 QSEEYVFL 1005
Score = 90 (36.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 43/185 (23%), Positives = 75/185 (40%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H VN F+ + L + T D +K+WD + GH + V + C +
Sbjct: 704 DEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV-NHCRFSPD 762
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSR---------VDYDAPGHSSTMM----AYSADGARL 566
+ + + S + DG +K W + R ++ + P ++ ++SADG R+
Sbjct: 763 D-KLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRI 821
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRS-VGVVQFDTTKNRFLAAGDEFMIKFW 625
NK +L WN + +K G S V V F + FL + D+ I+ W
Sbjct: 822 MVAAKNK---IFL--WN-MDSCLK-VADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLW 874
Query: 626 DMDNV 630
+ V
Sbjct: 875 ETKKV 879
Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D + +DSSIQ++N + +E L+ HQ+ + F N S+L WS
Sbjct: 979 DGKTLISSSDDSSIQVWNWQSEEY-VFLQAHQETVKD--FKLLKN--------SKLLSWS 1027
Query: 956 TDGWEKQASKFLT 968
DG K+ +T
Sbjct: 1028 FDGTVKKIWSIIT 1040
Score = 51 (23.0 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDE---------VKTKLKGHQKRITGLAFSNTLNVLVSSG 946
D+ ++A G ++ I+I+NV E V+ H +T L FS +LVS+G
Sbjct: 1104 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1163
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 10/55 (18%), Positives = 26/55 (47%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWE 960
D + +I++ + +L+GH+ + FS +L + + ++ +W+ E
Sbjct: 1072 DKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1126
Score = 43 (20.2 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V + +T+ G +++ + ++ ++W W E
Sbjct: 971 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEE 1001
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/61 (14%), Positives = 26/61 (42%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+++ +++ + + +I+++ ++ HQ + S S+ AD +W
Sbjct: 1019 KNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1078
Query: 955 S 955
S
Sbjct: 1079 S 1079
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 156 (60.0 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 58/199 (29%), Positives = 92/199 (46%)
Query: 396 SFKVWEL--GACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDEL 453
+ + WE G CS +Q +D + VNR+ SPD A + H V LY + ++
Sbjct: 21 TIRFWEALSGICSRTIQ---HAD--SQVNRLCISPDKKFLAAAGNPH-VRLYDINTSSQM 74
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
+ E H +V +AF K L+ T ED +KVWD + Q ++ H+SPV +
Sbjct: 75 PL-MTFEGHTNNVTAIAFHCDGKWLA--TSSEDGTVKVWDMRAPSVQRNYD-HKSPVNDL 130
Query: 514 CPHHKENIQFIFSTATDGKIKAW-LYDNLGSRV---DYDAPGHSSTMMAYSADGARLFSC 569
H + + S G+++AW L +N + + D P S T+ +DG+ L +
Sbjct: 131 LIHPNQGE--LLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITV---GSDGSMLIA- 184
Query: 570 GTNKEGESYLVEWNESEGA 588
G NK G Y+ +GA
Sbjct: 185 GNNK-GNCYVWRMLNHQGA 202
Score = 106 (42.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 53/249 (21%), Positives = 100/249 (40%)
Query: 474 PNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKI 533
P + +V+ G D I+ W+A++G + +S V +C + +F+ A G
Sbjct: 7 PQHSVLLVSSGYDHTIRFWEALSGICSRTIQHADSQVNRLCISPDK--KFL---AAAGNP 61
Query: 534 KAWLYD-NLGSRVDYDA-PGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAV 589
LYD N S++ GH++ T +A+ DG L T+ E + V W+ +V
Sbjct: 62 HVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWL---ATSSEDGTVKV-WDMRAPSV 117
Query: 590 KRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIR 649
+R Y K V + + L+ ++ WD+ + + + + S I
Sbjct: 118 QRNYDH--KSPVNDLLIHPNQGELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSS-IT 174
Query: 650 FNKEGILLAVSTNDNGIKI--LANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGS 707
+G +L N + + N G LL+ V F A + V +P + +
Sbjct: 175 VGSDGSMLIAGNNKGNCYVWRMLNHQGASLLQPVVK--FQAHQRYITRCVLSPDVKHLAT 232
Query: 708 ANANVGTSL 716
+A+ ++
Sbjct: 233 CSADATVNI 241
Score = 63 (27.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 922 KLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASKFLTIPNGRTASALADT 981
K + HQ+ IT S + L + AD+ + +WST+ + L + R A
Sbjct: 210 KFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTEDMSFMLERRLQ-GHQRWVWDCA-- 266
Query: 982 RVQFHLDQTHLLAVHETQIA-IYEAPKLECLKQ 1013
F D T+L+ +A ++E E ++Q
Sbjct: 267 ---FSADSTYLVTASSDHVARLWELSSGETIRQ 296
Score = 58 (25.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 906 DSSIQIYNVRVDE--VKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWE 960
D+++ I++ ++ +L+GHQ+ + AFS LV++ +D +W E
Sbjct: 236 DATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGE 292
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 120 (47.3 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 48/228 (21%), Positives = 90/228 (39%)
Query: 446 TYHGGDE---LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI 502
T H +E L H H ++ + FS KQL+ + D +K+W + Y
Sbjct: 2 TQHSVEEDPSLERHFR--GHRDAITSVDFSLNKKQLA--SGSMDSCLKIWSMKPQMRAYC 57
Query: 503 FEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YS 560
GH+ V +C + + S + D + W+ G + A H++T+ + +S
Sbjct: 58 LVGHKDAV--MCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKA--HTATVRSVHFS 113
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEF 620
+DG L + +K + + V + + + H V +F +A D+
Sbjct: 114 SDGQSLVTASDDKTIKVWTV--HRQKFLFSLSQH---INWVRCARFSPDGRLIASASDDK 168
Query: 621 MIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+K WD + + S GG + F+ G +A + D +K+
Sbjct: 169 TVKLWDKTSRECIHSFCEHGGFANH--VEFHPSGTCIAAAGTDKTVKV 214
Score = 102 (41.0 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I DS+++I ++ + L GHQ T +AFS T + S G+D Q+
Sbjct: 239 HPSGNYLITAS-NDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVM 297
Query: 953 VWSTD 957
VW T+
Sbjct: 298 VWKTN 302
>WB|WBGene00006810 [details] [associations]
symbol:unc-78 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0030240 "skeletal
muscle thin filament assembly" evidence=IMP] [GO:0040012
"regulation of locomotion" evidence=IGI;IMP] [GO:0030836 "positive
regulation of actin filament depolymerization" evidence=IDA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IDA] [GO:0051016 "barbed-end actin filament capping"
evidence=ISS] [GO:0016528 "sarcoplasm" evidence=IDA] [GO:0042643
"actomyosin, actin part" evidence=IDA] [GO:0003779 "actin binding"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0030016 "myofibril" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0040017 GO:GO:0051015 GO:GO:0030016
GO:GO:0030240 GO:GO:0042643 GO:GO:0030163 GO:GO:0051016
GeneTree:ENSGT00390000009416 HOGENOM:HOG000162559 OMA:QTTHILK
EMBL:FO080344 GO:GO:0030836 GO:GO:0016528 EMBL:AF324437 PIR:T15410
RefSeq:NP_001024356.1 RefSeq:NP_001024357.1 UniGene:Cel.7803
PDB:1NR0 PDB:1PEV PDBsum:1NR0 PDBsum:1PEV ProteinModelPortal:Q11176
SMR:Q11176 World-2DPAGE:0011:Q11176 PaxDb:Q11176 PRIDE:Q11176
EnsemblMetazoa:C04F6.4a.1 EnsemblMetazoa:C04F6.4a.2 GeneID:180631
KEGG:cel:CELE_C04F6.4 UCSC:C04F6.4a CTD:180631 WormBase:C04F6.4a
WormBase:C04F6.4b InParanoid:Q11176 EvolutionaryTrace:Q11176
NextBio:910190 Uniprot:Q11176
Length = 611
Score = 137 (53.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 69/271 (25%), Positives = 120/271 (44%)
Query: 412 SLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR----NHLEIEAHVGSVN 467
S ++T V+ V ++PDG+LF + LY G + + L+ AH GSV
Sbjct: 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243
Query: 468 DLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI----QF 523
L +S P+ + + D+ IK+W+ T + PV + + I Q
Sbjct: 244 GLTWS-PDGT-KIASASADKTIKIWNVATLKVEKTI-----PVGTRIEDQQLGIIWTKQA 296
Query: 524 IFSTATDGKIKAWLYDNLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVE 581
+ S + +G I ++ LGS +D GH+ T ++ SADG LFS + E ++
Sbjct: 297 LVSISANGFIN-FVNPELGS-IDQVRYGHNKAITALSSSADGKTLFSA----DAEGHINS 350
Query: 582 WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGG 641
W+ S G R + + + + TT GD F + WD D++ ++ + G
Sbjct: 351 WDISTGISNRVFPDV--HATMITGIKTTSK-----GDLFTVS-WD-DHLKVVPA--GGSG 399
Query: 642 LQASPCI--RFNKEGILLAVSTNDNGIKILA 670
+ +S + + + + + LAVS D I + A
Sbjct: 400 VDSSKAVANKLSSQPLGLAVSA-DGDIAVAA 429
Score = 82 (33.9 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 896 DNNIIAIGMEDSSIQIYNVR---VDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
D +A+G +DS + +Y + V EVKT + H IT +AFSN LV++ ++
Sbjct: 459 DKQFVAVGGQDSKVHVYKLSGASVSEVKTIV--HPAEITSVAFSNNGAFLVATDQSRKVI 516
Query: 953 VWS 955
+S
Sbjct: 517 PYS 519
Score = 57 (25.1 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNV-RVDEVKTKLKG-H-QKRITGLAFSNTLNVLVSSGADSQLC 952
DN +A G D+S+ ++N+ + + +KG H + + + N + VS+G DS +
Sbjct: 547 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTI-VSAGQDSNIK 605
Query: 953 VWS 955
W+
Sbjct: 606 FWN 608
Score = 52 (23.4 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 297 YQTADSEHVLKRSRPFGISDEVNNLSVNILPVAYTPQSLGQSSYSTDDLPKTVVMTLN-- 354
+ T + H+LK + P S V ++S + G+ + L T N
Sbjct: 86 WDTTQTTHILKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 144
Query: 355 -QGSAVKSMDFHPVQQILLVVGTNMGDVMLWE 385
Q A+ S+DF P + ++ G++ V ++E
Sbjct: 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFE 176
Score = 39 (18.8 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 933 LAFSNTLNVLVSSGADSQLCVWSTDGWEKQASKFLTIPNGRTASALAD 980
+A SN + G DS++ V+ G K + P T+ A ++
Sbjct: 454 VALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 501
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 135 (52.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 53/208 (25%), Positives = 94/208 (45%)
Query: 465 SVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFI 524
S NDL +Y N+ +++ G R + + EGHE +++ H E + +
Sbjct: 19 SKNDL-MAYTNRDKALLESGVRRTSNLQAPIMQ-----LEGHEGEIFT-AEFHPEG-ELL 70
Query: 525 FSTATDGKIKAW-LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVE 581
S+ D +I W +Y++ + + GHS +M ++ DG+ +F+C T+K L
Sbjct: 71 LSSGFDRQIYIWQVYEDCENVMAMS--GHSGAVMEAHFTPDGSHIFTCSTDKT----LAF 124
Query: 582 WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAG-DEFMIKFWDMDNVNLLASIDADG 640
W+ + G +R + G G V VQ + L +G D+ IK WD + ++++
Sbjct: 125 WDIATGQRQRRFKGHGN-FVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF 183
Query: 641 GLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ A C F G + DN +KI
Sbjct: 184 QVTAV-C--FGDTGEQVISGGIDNEVKI 208
Score = 117 (46.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 428 PDGTLF-GVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGED 486
P+G L + + I Y + ++ N + + H G+V + F+ P+ + TC D
Sbjct: 65 PEGELLLSSGFDRQI---YIWQVYEDCENVMAMSGHSGAVMEAHFT-PDGS-HIFTCSTD 119
Query: 487 RVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVD 546
+ + WD TG +Q F+GH + V S+ + Q + S + D IK W +
Sbjct: 120 KTLAFWDIATGQRQRRFKGHGNFVNSV-QGSRRGQQLLCSGSDDRTIKIWDARKKHAAHT 178
Query: 547 YDAPGHSSTMMAYSADGARLFSCGTNKE 574
++P T + + G ++ S G + E
Sbjct: 179 LESP-FQVTAVCFGDTGEQVISGGIDNE 205
Score = 83 (34.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+I+ G+ D+ ++I+++R V L+GH ITG++ S + ++++ D+ L VW
Sbjct: 197 VISGGI-DNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVW 251
Score = 63 (27.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
I G D + I++V + KL GH + + FS +++S +D L + D
Sbjct: 289 ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 50 (22.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRV---DEVKTKL-KGHQ----KRITGLAFSNTLNVLVSS 945
P+ + I+ M D+++++++VR E K+ +GHQ K + A+S + + S
Sbjct: 234 PEGDFILTNAM-DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSG 292
Query: 946 GADSQLCVWSTD 957
AD + +W +
Sbjct: 293 SADRHVYIWDVN 304
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 101 (40.6 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 7 ELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYLSGF--T 61
E + +++Q L FK + LE +S + + + E V +G WD + L
Sbjct: 19 EFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVLSGNWDSCVQVLDRIFDN 78
Query: 62 KVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLTL 121
+DD R + + + KQ LE L + D + A+ +L K + E + + ++
Sbjct: 79 SMDDTRNTA--LYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKIHRLACDIVYS 136
Query: 122 ENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNW 181
+ E + R +L EL+KLI PL + P RL L+ ++
Sbjct: 137 KEMESGEVDNCL--VLDLRRKLLVELEKLI---PL---PIVIPE---RRLEHLVETAVMD 185
Query: 182 QHQLCKNPRANPDIKTLFVDHTCGQ 206
Q C + D +L+ DH CG+
Sbjct: 186 QIDTCMYHNSC-DAVSLYKDHCCGR 209
Score = 92 (37.4 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 452 ELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVY 511
EL++ LE +H V+ +++S + +L +TCG V+K+WD TG ++ F G+ + +
Sbjct: 260 ELKHTLE--SHQNPVSFVSWSPDDTKL--LTCGNAEVLKLWDVDTGVLRHTF-GNNNTGF 314
Query: 512 SI--CPHHKENIQFIFSTA----------TDG-KIKAWLYDNLGSRVDYDA-PGHSSTMM 557
++ C ++ + + ++ TDG +IKAW + VD P S +
Sbjct: 315 TVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMIT 374
Query: 558 AYSADGARLFSCGTNKE 574
+S R+ + T E
Sbjct: 375 VFSDKEIRILNLETKVE 391
Score = 75 (31.5 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS-NTLNVLVSSGADSQLCVW 954
D++ IA G EDS + I+N++ + L GH + ++++ +L S+ D + +W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 58 (25.5 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 601 VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADG-GLQASPCIRFNKEGILLAV 659
V V + + L G+ ++K WD+D L + + G S C F L+
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCG 331
Query: 660 STN-DNGIKILANADG 674
S++ + GI ++ + DG
Sbjct: 332 SSDPERGI-VMWDTDG 346
Score = 50 (22.7 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLK--GHQ--KRITGLAFSNTLNVLVSSGA-DSQ 950
D + + I ++++ E K LK GH+ K + F + ++SG+ DSQ
Sbjct: 408 DGKFFIVNLSCQEIHLWDL-AGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQ 466
Query: 951 LCVWS 955
+ +W+
Sbjct: 467 VYIWN 471
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 64/286 (22%), Positives = 124/286 (43%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHG-GDELRNHL-EIEAHVGSVNDLAFS 472
+ + +V+ V +S DG L A + + YT + D + + E H ++D+AFS
Sbjct: 21 TSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFS 80
Query: 473 YPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGK 532
+ +V+ +D+ +K+WD TG+ GH + Y+ C + I S + D
Sbjct: 81 SDAR--FIVSASDDKTLKLWDVETGSLIKTLIGHTN--YAFCVNFNPQSNMIVSGSFDET 136
Query: 533 IKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVK 590
++ W D + P HS + A ++ DG+ + S ++ +G + W+ G
Sbjct: 137 VRIW--DVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS--SSYDGLCRI--WDSGTGHCV 190
Query: 591 RTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQASPCIR 649
+T V V+F + +F+ G + ++ W++ + L + G + A CI
Sbjct: 191 KTLIDDENPPVSFVRF-SPNGKFILVGTLDNTLRLWNISSAKFLKTYT--GHVNAQYCIS 247
Query: 650 --FN-KEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVA 692
F+ G + + DN + + + +LL+ +E T VA
Sbjct: 248 SAFSVTNGKRIVSGSEDNCVHMW-ELNSKKLLQKLEGHTETVMNVA 292
>WB|WBGene00019434 [details] [associations]
symbol:nmtn-1 species:6239 "Caenorhabditis elegans"
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0040002 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
EMBL:FO080960 OMA:RVCAYPD RefSeq:NP_491864.2
ProteinModelPortal:H2KZG7 SMR:H2KZG7 IntAct:H2KZG7
EnsemblMetazoa:K06A5.8b.1 EnsemblMetazoa:K06A5.8b.2 GeneID:172355
KEGG:cel:CELE_K06A5.8 CTD:172355 WormBase:K06A5.8b Uniprot:H2KZG7
Length = 942
Score = 109 (43.4 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 51/236 (21%), Positives = 97/236 (41%)
Query: 311 PFGI--SDEVNNLSVNILPVAY--TPQSLGQ--SSYSTDDLPKTVVMTLNQGSAVKSMDF 364
P G+ S ++ S+ LP A PQ L + S+ + + V A+++ F
Sbjct: 570 PQGVPMSHQIRPQSIAGLPQAQPQVPQQLQRPVSAPTGMGVQFVPVCRYEDSQAIRATGF 629
Query: 365 HPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRV 424
HP + +GTN + + +R + +E + + + + SV +
Sbjct: 630 HPSGRYF-ALGTNSKQLHICLYPDTKRTQSRPM-AYEQTK-NAEIAVTRPKQHRGSVYCL 686
Query: 425 MWSPDGTLFGVAYSKHIVHLYTYHGGD-ELRNHLEIEAHVGSVNDLAF--SYPNKQLSVV 481
++P+G L + + L ++ + +E+ H G+V DL F S N+ +V
Sbjct: 687 SFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDGTVRDLIFIESSINRSTILV 746
Query: 482 TCGEDRV-IKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
+ G + V D TG +GH +P+ + + QF+ S + D I+ W
Sbjct: 747 SGGAGNCHLNVTDCNTGQLIQSMKGHTAPILGLYTWSQAGNQFV-SCSQDKTIRFW 801
Score = 104 (41.7 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 6 RELVFLILQFLDEEKFKETVHKLEQDSG-----FFFNMRYFEDMVTNGEWDEVEKYLSGF 60
R+++ IL+FL+ T LE+++G F ++ + ++ +G+WD ++
Sbjct: 29 RDVIKAILEFLEIRGLHITQLSLEREAGVINGAFSDDLLFLRQLILDGQWDNALDFVEPL 88
Query: 61 TKVDDNRYSMKIF-FEIRKQKYLEALDKR-------DRAKAVEILV---KDLKVFSAFNE 109
V N + F + I K K+ E L + D AVE LV KDL+ E
Sbjct: 89 KPV--NEFDFGAFRYNITKYKFFELLCVKLEPGPLHDNDFAVEELVECLKDLEHICPTPE 146
Query: 110 DLFKEITQLLTLENFRDNEQLSKYGDTKSAR 140
D ++ + LLTL D+E + + SAR
Sbjct: 147 D-YRHLCALLTLPKLSDHEDFKNWNPS-SAR 175
Score = 71 (30.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 647 CIRFNKEGILLAVSTNDNGIKILA-NADGIRLLRTVESRTFDAS 689
C+ FN G LLA +ND I+++A N D R+ +E D +
Sbjct: 685 CLSFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDGT 728
Score = 61 (26.5 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 10/58 (17%), Positives = 30/58 (51%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
+ ++ G ED+S+ ++++ + + + H + + FSN L+++ D ++ +
Sbjct: 833 NGKLLVSGHEDASVALFDIGGNRILQTFRPHGDEVRTVRFSNAAYYLLTASYDKRVVI 890
Score = 57 (25.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 22/108 (20%), Positives = 49/108 (45%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGL-AFSNTLNVLVSSGADSQLCVWSTD 957
+++ G + + + + ++ +KGH I GL +S N VS D + W D
Sbjct: 745 LVSGGAGNCHLNVTDCNTGQLIQSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFW--D 802
Query: 958 GWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLLAVHE-TQIAIYE 1004
++ A ++ + ++ +A T V + L++ HE +A+++
Sbjct: 803 LRQQTAVNVISPGSNKSHNASPVTSVCVDPNGKLLVSGHEDASVALFD 850
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 120 (47.3 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 46/220 (20%), Positives = 92/220 (41%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + H ++ + FS KQL+ + D + VW ++ Y F GH+ V
Sbjct: 11 LERHFK--GHRDAITSVDFSLNTKQLA--SGSMDSCLMVWHMKPQSRAYRFAGHKDAV-- 64
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCG 570
C + + + S + D ++ W+ + G + A H++T+ + + +DG L +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRA--HTATVRSVHFCSDGQSLVTAS 122
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMD 628
+K + W+ ++ L + V +F ++A D+ +K WD
Sbjct: 123 DDKT----VKVWSTHR---QKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 629 NVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ + S GG + F+ G +A ++ DN +K+
Sbjct: 176 SRECVHSYCEHGGFVTY--VDFHPSGTCIAAASMDNTVKV 213
Score = 97 (39.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N ++ DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 238 HPSGNYLLTAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 953 VWSTD 957
VW ++
Sbjct: 297 VWKSN 301
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 133 (51.9 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 397 FKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNH 456
F++++L ++ Q S+ + VN V + G SK + L Y E
Sbjct: 284 FRLYDLPDFTLIQQLSMGQN---PVNTVSVNQTGEWLAFGSSK-LGQLLVYEWQSE-SYI 338
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
L+ + H S N LA+S P+ VVT ED IKVWD +G FE H S V ++
Sbjct: 339 LKQQGHFDSTNSLAYS-PDGS-RVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAV--Q 394
Query: 517 HKENIQFIFSTATDGKIKAW 536
+ Q +FS++ DG ++AW
Sbjct: 395 FAKRGQVMFSSSLDGTVRAW 414
Score = 87 (35.7 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P + A +++ I +++V+ ++ L GH+ ++ L+FS +VL S+ D + +
Sbjct: 440 PSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRI 499
Query: 954 WSTDGWEKQ 962
WS G +Q
Sbjct: 500 WSIFGRSQQ 508
Score = 52 (23.4 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 354 NQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEV 386
NQ VK + FHP + LL VG G+ L+++
Sbjct: 259 NQAK-VKCVTFHPATR-LLAVGFTSGEFRLYDL 289
Score = 48 (22.0 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 915 RVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
R ++ T+ + R+T + FS T N ++ + L ++ST+
Sbjct: 666 RGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEG-LLIYSTN 707
Score = 47 (21.6 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 604 VQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDAD 639
VQF T N F AA E ++ + D + L D D
Sbjct: 684 VQFSPTANAFAAASTEGLLIYSTNDTI-LFDPFDLD 718
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 20/92 (21%), Positives = 36/92 (39%)
Query: 824 LWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXX 882
+W +G L+ + +S E V C + S+ +S + SAS K I +++
Sbjct: 457 VWSVQTGQLL-DALS--GHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIE 513
Query: 883 XXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNV 914
P D +A+ I I+N+
Sbjct: 514 VYSDVLALSMRP-DGKEVAVSTLKGQISIFNI 544
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 648 IRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESR 684
I ++ +G+ + N+N I + + + L R + SR
Sbjct: 583 IHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSR 619
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 62/254 (24%), Positives = 107/254 (42%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L +H + R + H +V + FS P+ L + + D+ +++W + +F
Sbjct: 43 LMVWHMKPQTRAY-RFAGHKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNVKGESTVF 99
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGK-IKAWLYDNLGSRVDYDAPGHSSTMMA--YS 560
H + V S+ H + Q F TA+D K +K W + + H + + +S
Sbjct: 100 RAHTATVRSV--HFCSDGQS-FVTASDDKTVKVWSTHR--QKFLFSLSQHINWVRCAKFS 154
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTY--HGLGKRSVGVVQFDTTKNRFLAAGD 618
DG + S +K + W+++ +Y HG G V V F + AAG
Sbjct: 155 PDGRLIVSASDDKTVKL----WDKTSRECVHSYCEHG-G--FVTYVDFHPSGTCIAAAGM 207
Query: 619 EFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLL 678
+ +K WD+ LL A + F+ G L +++D+ +KIL +G RLL
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSA--AVNALSFHPSGNYLVTASSDSTLKILDLMEG-RLL 264
Query: 679 RTVESRTFDASRVA 692
T+ A+ VA
Sbjct: 265 YTLHGHQGPATTVA 278
Score = 117 (46.2 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 47/220 (21%), Positives = 90/220 (40%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + H +V + FS KQL+ + D + VW T+ Y F GH+ V
Sbjct: 11 LERHFK--GHRDAVTSVDFSLNTKQLA--SGSMDSCLMVWHMKPQTRAYRFAGHKDAV-- 64
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCG 570
C + + + S + D ++ W+ + G + A H++T+ + + +DG +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA--HTATVRSVHFCSDGQSFVTAS 122
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMD 628
+K + W+ ++ L + V +F ++A D+ +K WD
Sbjct: 123 DDKT----VKVWSTHR---QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 629 NVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ + S GG + F+ G +A + DN +K+
Sbjct: 176 SRECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDNTVKV 213
Score = 98 (39.6 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N ++ DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 238 HPSGNYLVTAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 953 VWSTD 957
VW ++
Sbjct: 297 VWKSN 301
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 68/269 (25%), Positives = 112/269 (41%)
Query: 453 LRNHLEIEAHVGS---VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESP 509
L+ H +VG V L FS P L + + DR +++W K F+ H +P
Sbjct: 47 LKPHARAYRYVGHKDVVTSLQFS-PQGNL-LASASRDRTVRLWVLDRKGKSSEFKAHTAP 104
Query: 510 VYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLF 567
V S+ + Q + + + D IK W R Y H+ + +S DG +
Sbjct: 105 VRSV--DFSADGQLLVTASEDKSIKVW--SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 568 SCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQF-DTTKNR--FLAAGDEFMIKF 624
SC +K + W+ + K+ + SVG F D N +AG + +K
Sbjct: 161 SCSEDKT----IKIWDTTN---KQCVNNFSD-SVGFANFVDFNPNGTCIASAGSDHAVKI 212
Query: 625 WDMDNVNLLASIDADG-GLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVES 683
WD+ LL G+ C+ F+ G L +++D +K+L +G RL+ T++
Sbjct: 213 WDIRMNKLLQHYQVHSCGVN---CLSFHPLGNSLVTASSDGTVKMLDLIEG-RLIYTLQG 268
Query: 684 RTFDASRVASAAIVKAPAIGTFGSANANV 712
T V + + K + T G A+A V
Sbjct: 269 HT---GPVFTVSFSKDGELLTSGGADAQV 294
Score = 130 (50.8 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 49/212 (23%), Positives = 91/212 (42%)
Query: 460 EAHVGSVNDLAFSYPN-KQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+ H ++ FS PN KQ++ T D + +W + Y + GH+ V S+ +
Sbjct: 15 KGHKAAITSADFS-PNCKQIA--TASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESY 578
N+ + S + D ++ W+ D G ++ A + +SADG L T E +S
Sbjct: 72 GNL--LASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLV---TASEDKSI 126
Query: 579 LVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
V W+ +R + L + + V +F ++ ++ IK WD N + +
Sbjct: 127 KV-WSMFR---QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + FN G +A + +D+ +KI
Sbjct: 183 SDSVGF--ANFVDFNPNGTCIASAGSDHAVKI 212
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 38/142 (26%), Positives = 67/142 (47%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ K+W+ + + SD N V ++P+GT A S H V ++ ++L
Sbjct: 166 KTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRM-NKLL 221
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
H ++ H VN L+F +P S+VT D +K+ D + G Y +GH PV+++
Sbjct: 222 QHYQV--HSCGVNCLSF-HPLGN-SLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS 277
Query: 515 PHHKENIQFIFSTATDGKIKAW 536
K+ + + S D ++ W
Sbjct: 278 -FSKDG-ELLTSGGADAQVLIW 297
Score = 96 (38.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+TA V V +S DG L A + +++ R + H V FS P+
Sbjct: 101 HTAPVRSVDFSADGQLLVTASEDKSIKVWSMF---RQRFLYSLYRHTHWVRCAKFS-PDG 156
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
+L +V+C ED+ IK+WD T KQ + +S ++ N I S +D +K W
Sbjct: 157 RL-IVSCSEDKTIKIWD--TTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 86 (35.3 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N+++ D ++++ ++ + L+GH + ++FS +L S GAD+Q+
Sbjct: 237 HPLGNSLVTAS-SDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVL 295
Query: 953 VWSTD 957
+W T+
Sbjct: 296 IWRTN 300
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 134 (52.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 48/220 (21%), Positives = 93/220 (42%)
Query: 412 SLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAF 471
S+ D V + + D A+ ++ +Y G +++ ++AH V +
Sbjct: 55 SIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKS---MKAHETPVITMTI 111
Query: 472 SYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDG 531
N L+ T G + ++KVWD + F GH + ++C +N + S A D
Sbjct: 112 DPTNTLLA--TGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDS 169
Query: 532 KIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAV 589
+++ W ++ S ++ GHSS + + + G+ L S +K + WN + +
Sbjct: 170 RVRLWDLNSSRSMAVFE--GHSSVIRGLTFEPTGSFLLSGSRDKTVQV----WNIKKRSA 223
Query: 590 KRT---YHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
RT +H + ++G V + AG+ +I WD
Sbjct: 224 VRTIPVFHSV--EAIGWVNGQPEEKILYTAGEGNLILAWD 261
Score = 87 (35.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D IIA +D +I++++ EV L+GH++ + +F+ L S D + +W
Sbjct: 475 KDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Query: 955 STD 957
+ D
Sbjct: 535 NVD 537
Score = 73 (30.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASK 965
D ++++++ E L H+ R+ LA ++LVS GAD+ + VW D E+ +K
Sbjct: 570 DGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWK-DVTEEYIAK 628
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 19/92 (20%), Positives = 44/92 (47%)
Query: 735 NFTDVKPKIADEAVEKS-RIWKLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILA 793
+F ++A + +++ RIW + + QC ++ + T + +LIY + G +++
Sbjct: 514 SFNPFSRQLASGSGDRTIRIWNV----DTQQC--VQTLEGHTGA-ILKLIYISQGTQVVS 566
Query: 794 LASNAVHKLWKWPRNERNSTGKATTNQAPQLW 825
A++ + K+W E +T N ++W
Sbjct: 567 AAADGLVKVWSLSSGECVAT---LDNHEDRVW 595
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 7/38 (18%), Positives = 17/38 (44%)
Query: 923 LKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWE 960
+K H + + + S ++ S+ D + +W + E
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGE 498
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 72/302 (23%), Positives = 125/302 (41%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+ A++ V +SP G A + L+ + R + H V + FS P
Sbjct: 17 HKAAITSVDFSPSGKQLATASWDTFLMLWNCK--PQARAFRYV-GHKDVVTSVQFS-PLG 72
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L + + DR +++W K F+ H +PV S+ + QF+ + + D IK W
Sbjct: 73 NL-LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSV--DFSADGQFLATASEDKSIKVW 129
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
+ R Y H+ + +S DG + SC +K + W+ + K+ +
Sbjct: 130 --NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTN---KQCVN 180
Query: 595 GLGKRSVGVVQF-DTTKNR--FLAAGDEFMIKFWDMDNVNLLASIDA-DGGLQASPCIRF 650
SVG F D N +AG + +K WD+ LL GG+ C+ F
Sbjct: 181 NFSD-SVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN---CVSF 236
Query: 651 NKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGSANA 710
+ G + +++D +KIL +G RL+ T++ T V + + K + + G A+
Sbjct: 237 HPSGNYIITASSDGTLKILDLLEG-RLIYTLQGHT---GPVFTVSFSKGGELFSSGGADT 292
Query: 711 NV 712
V
Sbjct: 293 QV 294
Score = 133 (51.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 48/211 (22%), Positives = 90/211 (42%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H ++ + FS KQL+ T D + +W+ + + + GH+ V S+
Sbjct: 15 KGHKAAITSVDFSPSGKQLA--TASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLG 72
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYL 579
N+ + S + D ++ W+ D G ++ A + +SADG L T E +S
Sbjct: 73 NL--LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFL---ATASEDKSIK 127
Query: 580 VEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASID 637
V WN +R + L + + V +F ++ ++ IK WD N + +
Sbjct: 128 V-WNMYR---QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 638 ADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + FN G +A + +D+ +KI
Sbjct: 184 DSVGF--ANFVDFNPNGTCIASAGSDHTVKI 212
Score = 124 (48.7 bits), Expect = 0.00040, P = 0.00040
Identities = 35/142 (24%), Positives = 66/142 (46%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ K+W+ + + SD N V ++P+GT A S H V ++ ++L
Sbjct: 166 KTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRV-NKLL 221
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
H ++ H G VN ++F +P+ ++T D +K+ D + G Y +GH PV+++
Sbjct: 222 QHYQV--HSGGVNCVSF-HPSGNY-IITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 515 PHHKENIQFIFSTATDGKIKAW 536
+ + S D ++ W
Sbjct: 278 --FSKGGELFSSGGADTQVLLW 297
Score = 82 (33.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N II D +++I ++ + L+GH + ++FS + S GAD+Q+
Sbjct: 237 HPSGNYIITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
Query: 953 VWSTD 957
+W T+
Sbjct: 296 LWRTN 300
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 141 (54.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 58/243 (23%), Positives = 106/243 (43%)
Query: 408 PLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGG-DELRNHLEIEAHVGSV 466
PL+ + +T +N V S DG A + L+ ++G + + H G++
Sbjct: 371 PLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAI 430
Query: 467 NDLAFSYP-NKQLSVVTCGEDRVIKVW------DAVTGTKQYIFEGHESPVYSICPHHKE 519
++ S N+ +VT D IK W +++ T +Y H+ + SI
Sbjct: 431 TAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI--DVSP 488
Query: 520 NIQFIFSTATDGKI-KAWLYDNLGSRVDYDAPGHSSTMMA---YSADGARLFSCGTNKEG 575
N ++ F+TA+ K+ K W D+ G + GH + Y D +L G+ G
Sbjct: 489 NDEY-FATASYDKLGKVWQTDS-GETIGV-LKGHKRGLWDINFYKFD--KLIVTGS---G 540
Query: 576 ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKN-RFLAAGDEFMIKFWDMDNVNLLA 634
+ + W+ + + K+T G SV V+F ++ + L+ G + +IK WD ++
Sbjct: 541 DKTIKVWSLLDFSCKKTLEG-HTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIK 599
Query: 635 SID 637
S+D
Sbjct: 600 SLD 602
Score = 118 (46.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 44/214 (20%), Positives = 91/214 (42%)
Query: 427 SPDGTLFGVAYSKHIVHLYTYHGGDELRNH-LEIEAHVGSVNDLAFSYPNKQLSVVTCGE 485
+PDG+ + ++ ++ + G ++N L ++ SV+ + + G
Sbjct: 69 TPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLF-------AFGGS 121
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQF--IFSTATDGKIKAWLYDNLGS 543
D VI VWD G + +GH + + S+ H + N Q + S T G +K W D +
Sbjct: 122 DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIW--DLVKR 179
Query: 544 RVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR-- 599
R + H++ + + + DG S G ++ ++ +N T+ + ++
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGR----DNVVIIYNTKNFKTINTFP-INEQIE 234
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ G V + F G E ++K WD+ + ++
Sbjct: 235 AAGFVSLIDDRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 81 (33.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 31/152 (20%), Positives = 62/152 (40%)
Query: 807 RNERNSTGKATTNQAPQLWQ-P--PSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASG 863
+NE +T+ + W+ P P+ I+ T++ + + + +S ND Y +AS
Sbjct: 439 QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASY 498
Query: 864 GKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKL 923
K+ + + +I G D +I+++++ K L
Sbjct: 499 DKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTL 558
Query: 924 KGHQKRITGLAFSNTLNV-LVSSGADSQLCVW 954
+GH + + F N + L+S GAD + +W
Sbjct: 559 EGHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 77 (32.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HPQ +++ G D I++++ + E+ L H +RI + N ++ AD +L
Sbjct: 575 HPQ---LLSCGA-DGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLS 630
Query: 953 VWSTDGWEKQASKF 966
W TD E++ KF
Sbjct: 631 FW-TDNTEEEV-KF 642
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 356 GSAVKSMDFHPV---QQILLVVGTNMGDVMLWEVGSRERI 392
G+ + S+ FH Q L G MG V +W++ R I
Sbjct: 143 GTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCI 182
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVL 942
++A+ + D S+++YNV ++T + I + NT+++L
Sbjct: 671 LLALTL-DHSMRLYNVIKSSIETN-EDKDSIIGSFSLENTISLL 712
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 141 (54.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 58/243 (23%), Positives = 106/243 (43%)
Query: 408 PLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGG-DELRNHLEIEAHVGSV 466
PL+ + +T +N V S DG A + L+ ++G + + H G++
Sbjct: 371 PLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAI 430
Query: 467 NDLAFSYP-NKQLSVVTCGEDRVIKVW------DAVTGTKQYIFEGHESPVYSICPHHKE 519
++ S N+ +VT D IK W +++ T +Y H+ + SI
Sbjct: 431 TAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSI--DVSP 488
Query: 520 NIQFIFSTATDGKI-KAWLYDNLGSRVDYDAPGHSSTMMA---YSADGARLFSCGTNKEG 575
N ++ F+TA+ K+ K W D+ G + GH + Y D +L G+ G
Sbjct: 489 NDEY-FATASYDKLGKVWQTDS-GETIGV-LKGHKRGLWDINFYKFD--KLIVTGS---G 540
Query: 576 ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKN-RFLAAGDEFMIKFWDMDNVNLLA 634
+ + W+ + + K+T G SV V+F ++ + L+ G + +IK WD ++
Sbjct: 541 DKTIKVWSLLDFSCKKTLEG-HTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIK 599
Query: 635 SID 637
S+D
Sbjct: 600 SLD 602
Score = 118 (46.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 44/214 (20%), Positives = 91/214 (42%)
Query: 427 SPDGTLFGVAYSKHIVHLYTYHGGDELRNH-LEIEAHVGSVNDLAFSYPNKQLSVVTCGE 485
+PDG+ + ++ ++ + G ++N L ++ SV+ + + G
Sbjct: 69 TPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLF-------AFGGS 121
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQF--IFSTATDGKIKAWLYDNLGS 543
D VI VWD G + +GH + + S+ H + N Q + S T G +K W D +
Sbjct: 122 DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIW--DLVKR 179
Query: 544 RVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR-- 599
R + H++ + + + DG S G ++ ++ +N T+ + ++
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGR----DNVVIIYNTKNFKTINTFP-INEQIE 234
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ G V + F G E ++K WD+ + ++
Sbjct: 235 AAGFVSLIDDRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 81 (33.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 31/152 (20%), Positives = 62/152 (40%)
Query: 807 RNERNSTGKATTNQAPQLWQ-P--PSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASG 863
+NE +T+ + W+ P P+ I+ T++ + + + +S ND Y +AS
Sbjct: 439 QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASY 498
Query: 864 GKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKL 923
K+ + + +I G D +I+++++ K L
Sbjct: 499 DKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTL 558
Query: 924 KGHQKRITGLAFSNTLNV-LVSSGADSQLCVW 954
+GH + + F N + L+S GAD + +W
Sbjct: 559 EGHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 77 (32.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HPQ +++ G D I++++ + E+ L H +RI + N ++ AD +L
Sbjct: 575 HPQ---LLSCGA-DGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLS 630
Query: 953 VWSTDGWEKQASKF 966
W TD E++ KF
Sbjct: 631 FW-TDNTEEEV-KF 642
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 356 GSAVKSMDFHPV---QQILLVVGTNMGDVMLWEVGSRERI 392
G+ + S+ FH Q L G MG V +W++ R I
Sbjct: 143 GTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCI 182
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVL 942
++A+ + D S+++YNV ++T + I + NT+++L
Sbjct: 671 LLALTL-DHSMRLYNVIKSSIETN-EDKDSIIGSFSLENTISLL 712
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 130 (50.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 64/301 (21%), Positives = 116/301 (38%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS----YPNKQLS 479
V WSPDGT V ++ G ++ + E++ H V +A+ + +
Sbjct: 201 VSWSPDGTRLATCSMDKTVRIWDPETGKQVGS--ELKGHAKWVQGIAWEPLHLWRDGTPR 258
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D ++W TG +++ GH+ V + +++ + D +K W D
Sbjct: 259 LVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW--D 316
Query: 540 NLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESE--GAVKRTYHG 595
+ + +D H+ + +A S D F C T + V E K Y
Sbjct: 317 AVKGTLLHDLKSHAHWVNHLALSTD----FVCRTGFFDHTKTVPATAEEKTAKAKERYEK 372
Query: 596 LGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGI 655
+ +V+ R ++A D+F + +D N G + + F+ +G
Sbjct: 373 AARVGGKIVE------RLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGS 426
Query: 656 LLAVSTNDNGIKILANADG--IRLLRTVESRTFDASRVA-SAAIVKAPAIGTFGSANANV 712
++A + DN K+ DG I LR + + S A S +V A T N
Sbjct: 427 MIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRT 486
Query: 713 G 713
G
Sbjct: 487 G 487
Score = 96 (38.9 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSP-----DGTLFGVAYSKHIV-HLYTYH 448
K+ ++W+ + + L + V + W P DGT V+ SK ++T +
Sbjct: 217 KTVRIWD-PETGKQVGSELKG-HAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVN 274
Query: 449 GGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGH 506
G R + H GSV+ + + N V T D+ +KVWDAV GT + + H
Sbjct: 275 TG---RTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Score = 94 (38.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 37/170 (21%), Positives = 70/170 (41%)
Query: 471 FSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATD 530
FS P + T D ++WDA TGT ++ +GH V + + + + + + D
Sbjct: 160 FS-PASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVS-WSPDGTR-LATCSMD 216
Query: 531 GKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNK---EGESYLVE-WNESE 586
++ W + G +V + GH+ + + + L+ GT + + + W +
Sbjct: 217 KTVRIWDPET-GKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNT 275
Query: 587 GAVKRTYHGLGKRSVGVVQFDTTKNR---FLAAGDEFMIKFWDMDNVNLL 633
G + G K SV V++ + A+ D+ +K WD LL
Sbjct: 276 GRTEHVLSG-HKGSVSCVRWGAGNGTGVVYTASHDK-TVKVWDAVKGTLL 323
Score = 86 (35.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/59 (25%), Positives = 34/59 (57%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ +D++++++NVR ++ T L GH+ + G+ +S + S G D + +W
Sbjct: 466 DSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSIC-- 514
++ H G V +++S +L+ TC D+ +++WD TG KQ E GH V I
Sbjct: 191 LKGHAGWVLGVSWSPDGTRLA--TCSMDKTVRIWDPETG-KQVGSELKGHAKWVQGIAWE 247
Query: 515 PHH--KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM 556
P H ++ + S + D + W N G R ++ GH ++
Sbjct: 248 PLHLWRDGTPRLVSASKDFTARIWTV-NTG-RTEHVLSGHKGSV 289
Score = 75 (31.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D ++IA D++ +++N R + L+GH + +FS +LV++ D+ L VW+
Sbjct: 424 DGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWN 483
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 50/212 (23%), Positives = 95/212 (44%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ + Y +GH V + H+
Sbjct: 52 LSGHEGEVYCCKF-HPNGA-TLASSGYDRLILMWNVYGDCENYATLKGHSGAVMEL--HY 107
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + + A +C + +G
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSET-GERVKR-LKGHTSFVNSCFPARRGPQLACTGSDDGT 165
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A T+ + V V F+ T ++ ++ G + IK WD+ L+ S+
Sbjct: 166 VKL--WDIRKKASVHTFQNTYQ--VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM 221
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + +G L ++ DN +++
Sbjct: 222 QGHGDSVTG--LSLSADGSYLLSNSMDNSVRV 251
Score = 113 (44.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 39/134 (29%), Positives = 61/134 (45%)
Query: 406 SMPLQAS--LSSDYTASVNRVMWSPDG-TLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
S LQA L S + V + P+G TL Y + I+ Y GD N+ ++ H
Sbjct: 42 SSSLQAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY--GD-CENYATLKGH 98
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 99 SGAVMELHYNTDGSLL--FSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR-GPQ 155
Query: 523 FIFSTATDGKIKAW 536
+ + DG +K W
Sbjct: 156 LACTGSDDGTVKLW 169
Score = 82 (33.9 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+ II+ G+ D+ I+++++R +++ ++GH +TGL+ S + L+S+ D+ + VW
Sbjct: 196 DQIISGGI-DNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
Score = 71 (30.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 25/116 (21%), Positives = 57/116 (49%)
Query: 903 GMEDSSIQIYNVRVD-EVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEK 961
G +D +++++++R V T +Q + + F++T + ++S G D+ + VW +
Sbjct: 160 GSDDGTVKLWDIRKKASVHTFQNTYQ--VLSVTFNDTSDQIISGGIDNDIKVW-----DL 212
Query: 962 QASKFLTIPNGRTASALADTRVQFHLDQTHLLAVH-ETQIAIYE----APKLECLK 1012
+ +K + G S T + D ++LL+ + + +++ APK C+K
Sbjct: 213 RQNKLIYSMQGHGDSV---TGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVK 265
Score = 66 (28.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
D + IA G D + I++ + KL GH + +AF +++S +D +L +
Sbjct: 286 DGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 72/303 (23%), Positives = 127/303 (41%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+ A++ + SP+G A + L+ + R + + H V + FS P+
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFK--PHARAYRYV-GHKDVVTSVQFS-PHG 72
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L + + DR +++W K F+ H +PV S+ + QF+ + + D IK W
Sbjct: 73 NL-LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV--DFSADGQFLATASEDKSIKVW 129
Query: 537 -LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
+Y R Y H+ + +S DG + SC +K + W+ + K+
Sbjct: 130 SMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTN---KQCV 179
Query: 594 HGLGKRSVGV---VQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDA-DGGLQASPCIR 649
+ SVG V F+ + +AG + +K WD+ LL GG+ CI
Sbjct: 180 NNFSD-SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN---CIS 235
Query: 650 FNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGSAN 709
F+ L +++D +KIL +G RL+ T++ T V + + K + G A+
Sbjct: 236 FHPSDNYLVTASSDGTLKILDLLEG-RLIYTLQGHT---GPVFTVSFSKGGELFASGGAD 291
Query: 710 ANV 712
V
Sbjct: 292 TQV 294
Score = 126 (49.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 49/213 (23%), Positives = 90/213 (42%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI--CPHH 517
+ H ++ L S KQL+ T D + +W+ + Y + GH+ V S+ PH
Sbjct: 15 KGHKAAITSLDLSPNGKQLA--TASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG 72
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGES 577
N+ + S + D ++ W+ D G ++ A + +SADG L T E +S
Sbjct: 73 --NL--LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL---ATASEDKS 125
Query: 578 YLVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
V W+ +R + L + + V +F ++ ++ IK WD N + +
Sbjct: 126 IKV-WSMYR---QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + FN G +A + +D +K+
Sbjct: 182 FSDSVGF--ANFVDFNPSGTCIASAGSDQTVKV 212
Score = 88 (36.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP DN ++ D +++I ++ + L+GH + ++FS + S GAD+Q+
Sbjct: 237 HPSDNYLVTAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 953 VWSTD 957
+W T+
Sbjct: 296 LWRTN 300
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 141 (54.7 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 63 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 118
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 177 VKL--WDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 233 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 122 (48.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L+ +G + N+ ++ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG--DCDNYATLKGH 109
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 167 LVCTGSDDGTVKLW 180
Score = 66 (28.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + IA G D + +++ V KL GH I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 215 PVTNP----LMGAVPKAGAFPPLSAHGPFQPTPAAL 246
PV P L+GA AGA P GP Q TP AL
Sbjct: 16 PVKRPRHELLLGA---AGAGP---GAGPQQATPGAL 45
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 59/253 (23%), Positives = 104/253 (41%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L +H + R + H +V + FS P+ L + + D+ +++W + +F
Sbjct: 43 LMIWHMKPQSRAY-RFTGHKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNVKGESTVF 99
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
H + V S+ H + Q + + + D +K W R + H + + +S
Sbjct: 100 RAHTATVRSV--HFCSDGQSLVTASDDKTVKVWSTHR--QRFLFSLTQHINWVRCAKFSP 155
Query: 562 DGARLFSCGTNKEGESYLVEWNESEGAVKRTY--HGLGKRSVGVVQFDTTKNRFLAAGDE 619
DG + S +K + W+++ +Y HG G V V F + AAG +
Sbjct: 156 DGRLIVSASDDKTVKL----WDKTSRECIHSYCEHG-G--FVTYVDFHPSGTCIAAAGMD 208
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLR 679
+K WD LL A + F+ G L +++D+ +KIL +G RLL
Sbjct: 209 NTVKVWDARTHRLLQHYQLHSA--AVNALSFHPSGNYLITASSDSTLKILDLMEG-RLLY 265
Query: 680 TVESRTFDASRVA 692
T+ A+ VA
Sbjct: 266 TLHGHQGPATTVA 278
Score = 113 (44.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/229 (21%), Positives = 94/229 (41%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + H +V + FS K L+ + D + +W ++ Y F GH+ V
Sbjct: 11 LERHFK--GHRDAVTCVDFSLNTKHLA--SGSMDSTLMIWHMKPQSRAYRFTGHKDAV-- 64
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCG 570
C + + + S + D ++ W+ + G + A H++T+ + + +DG L +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA--HTATVRSVHFCSDGQSLVTAS 122
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNV 630
+K + + + T H V +F ++A D+ +K WD +
Sbjct: 123 DDKTVKVWST--HRQRFLFSLTQH---INWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLR 679
+ S GG + F+ G +A + DN +K+ +A RLL+
Sbjct: 178 ECIHSYCEHGGFVTY--VDFHPSGTCIAAAGMDNTVKVW-DARTHRLLQ 223
Score = 99 (39.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 238 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 953 VWSTD 957
VW ++
Sbjct: 297 VWKSN 301
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 58/253 (22%), Positives = 104/253 (41%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L +H + R + H +V + FS P+ L + + D+ +++W + +F
Sbjct: 43 LMIWHMKPQSRAY-RFTGHKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNVKGESTVF 99
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
H + V S+ H + Q + + + D +K W R + H + + +S
Sbjct: 100 RAHTATVRSV--HFCSDGQLLVTASDDKTVKVWSTHR--QRFLFSLTQHINWVRCAKFSP 155
Query: 562 DGARLFSCGTNKEGESYLVEWNESEGAVKRTY--HGLGKRSVGVVQFDTTKNRFLAAGDE 619
DG + S +K + W+++ +Y HG G V V F + AAG +
Sbjct: 156 DGRLIVSASDDKTVKL----WDKTSRECVHSYCEHG-G--FVTYVDFHPSGTCIAAAGMD 208
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLR 679
+K WD L+ A + F+ G L +++D+ +KIL +G RLL
Sbjct: 209 NTVKVWDTRTHRLVQHYQLHSA--AVNALSFHPSGNYLITASSDSTLKILDLMEG-RLLY 265
Query: 680 TVESRTFDASRVA 692
T+ A+ VA
Sbjct: 266 TLHGHQGPATTVA 278
Score = 110 (43.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 45/218 (20%), Positives = 88/218 (40%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + H +V + FS K L+ + D + +W ++ Y F GH+ V
Sbjct: 11 LERHFK--GHRDAVTCVDFSLNTKHLA--SGSMDSTLMIWHMKPQSRAYRFTGHKDAV-- 64
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCG 570
C + + + S + D ++ W+ + G + A H++T+ + + +DG L +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA--HTATVRSVHFCSDGQLLVTAS 122
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNV 630
+K + + + T H V +F ++A D+ +K WD +
Sbjct: 123 DDKTVKVWST--HRQRFLFSLTQH---INWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ S GG + F+ G +A + DN +K+
Sbjct: 178 ECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDNTVKV 213
Score = 99 (39.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 238 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 953 VWSTD 957
VW ++
Sbjct: 297 VWKSN 301
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 121 (47.7 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 54/214 (25%), Positives = 97/214 (45%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYL 57
+S +++ LI Q L +TV L Q+SG + F + V GEWD+ E L
Sbjct: 48 LSQAEEDVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDL 107
Query: 58 SGFTKVDDNRYSM-KIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEIT 116
+ + + ++ ++ F + +QKYLE L+ +A+++L +L +N D ++
Sbjct: 108 NELKALMHSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLK-YNTDRIHVLS 166
Query: 117 QLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLIN 176
L + D + +++ + K A G L KL P + P RL+TL+
Sbjct: 167 GYLMCSHAEDLKAKAEW-EGKGA-GSRCRLLDKLQTYLP---PSVMLPP---RRLQTLLR 218
Query: 177 QSLNWQHQLC--KNPRANP--DIKTLFVDHTCGQ 206
Q++ Q C N + + D +L +DH C +
Sbjct: 219 QAVELQRDRCLYHNTKLDSSLDSVSLLLDHVCSR 252
Score = 86 (35.3 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 894 PQDNNIIAIGMED-SSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
P D +IA G +D S + ++NV+ E++TK+ + H+ +T +A++ V+ G Q
Sbjct: 323 PDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 382
Query: 952 CVWSTDG-----WEKQASKFL-TIPNGRTASALADT 981
DG WE + L + +GRT A +DT
Sbjct: 383 YQCDLDGNLLESWEGVRVQCLWCMGDGRTVLA-SDT 417
Score = 72 (30.4 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
GH+ + +A+S D L +CG + E +L WN G ++ + S+ V ++
Sbjct: 311 GHAYGVSYLAWSPDDVYLIACGPDDCSELWL--WNVQTGELRTKMSQSHEDSLTSVAWNP 368
Query: 609 TKNRFLAAGDEFMIKFWDMDNVNLLAS 635
RF+ G D+D NLL S
Sbjct: 369 DGKRFVTGGQRGQFYQCDLDG-NLLES 394
Score = 68 (29.0 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKL----KGHQKRITGLAFSNTLNVLVSSGAD--S 949
D +A G +D+++ I+ V D + KL +GH ++ LA+S L++ G D S
Sbjct: 278 DGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCS 337
Query: 950 QLCVWSTDGWE 960
+L +W+ E
Sbjct: 338 ELWLWNVQTGE 348
Score = 64 (27.6 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QL 951
H +D IA G ED + I++ R + +L GH + + ++++ + L++S +D +
Sbjct: 493 HNED--FIASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNPCIPSLMASASDDGTV 550
Query: 952 CVW 954
+W
Sbjct: 551 RIW 553
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 398 KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLF 433
++W + L+ +S + S+ V W+PDG F
Sbjct: 338 ELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRF 373
Score = 52 (23.4 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 649 RFNKEGILLAVSTNDNGI---KILANADGIRLLRTVESRTFDASRVA 692
+F+ +G LA + D + ++ + ++LLRT+E + S +A
Sbjct: 274 KFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLA 320
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 738 DVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDN-LTAMRVSRLIYTNSGLAILALAS 796
D + +A + ++ R + ++T+ R++ D+ + + VS+ N LA+L +A+
Sbjct: 408 DGRTVLASDTHQRIRGYSFEDLTD----RNIVQEDHPIMSFTVSK----NGRLALLNVAT 459
Query: 797 NAVHKLW 803
VH LW
Sbjct: 460 QGVH-LW 465
Score = 43 (20.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 753 IWKLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLWKW 805
IW++ T Q + LR + A VS L ++ + ++A + +LW W
Sbjct: 293 IWQVEPDTH--QLKLLRTLEG-HAYGVSYLAWSPDDVYLIACGPDDCSELWLW 342
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 146 (56.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 68/297 (22%), Positives = 111/297 (37%)
Query: 379 GDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYS 438
G L + G R V KV L S L SL + + SPD + A
Sbjct: 28 GKAQLDQTG-RHLFCVCGTKVNILDVASGDLIRSLEQEDQEDITAFDLSPDDEVLVTASR 86
Query: 439 KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGT 498
++ + + G R I H V +AF + L+ C D ++VWD V
Sbjct: 87 ALLLAQWAWREGTVARLWKAI--HTAPVASMAFDATSTLLATGGC--DGAVRVWDIVQHY 142
Query: 499 KQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA 558
+ F G V+ + H +FS+A D I+ W + A + T ++
Sbjct: 143 GTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLS 202
Query: 559 YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT------TKN- 611
+S DG + S G +K + W+ RT V+ + KN
Sbjct: 203 FSEDGHTMLSSGRDK----ICIVWDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNS 258
Query: 612 --RFLAAGDEFMIKFWDMDNVNLLASIDADGGL--QASPCIRFNKEGILLAVSTNDN 664
FL AGD+ +++ W+ + + + GL + + C G+LL V+ + N
Sbjct: 259 GLHFLTAGDQGILRVWEAASGQCVYTQPQMSGLRQELTHCTLARAAGLLLTVTADHN 315
Score = 112 (44.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/125 (25%), Positives = 61/125 (48%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H +N LA S PN +L + T +DR K+W +F GH ++++
Sbjct: 478 HDKDINSLAVS-PNDKL-LATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNV--QFSPTD 533
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMM--AYSADGARLFSCGTNKEGESYL 579
Q + + + DG IK W + ++ GH ++++ A+ + GA+L S G++ + +
Sbjct: 534 QVLATASADGTIKLWALQDFSCLKTFE--GHDASVLKVAFVSRGAQLLSSGSDGLLKLWT 591
Query: 580 VEWNE 584
++ NE
Sbjct: 592 IKSNE 596
Score = 72 (30.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A G +D + +++ + ++ GH++ + + FS T VL ++ AD + +
Sbjct: 489 PNDK-LLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATASADGTIKL 547
Query: 954 WS 955
W+
Sbjct: 548 WA 549
Score = 68 (29.0 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASK 965
D ++++ ++ +E L H+ ++ GL S + ++ G+DS++ +W +QA +
Sbjct: 584 DGLLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAEQAEE 643
Score = 66 (28.3 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A D +I+++ ++ +GH + +AF + L+SSG+D L +
Sbjct: 531 PTDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKL 589
Query: 954 WS 955
W+
Sbjct: 590 WT 591
Score = 38 (18.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 926 HQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
H K I LA S +L + D +W+
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLWA 507
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 112 (44.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 46/220 (20%), Positives = 91/220 (41%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + H +V + FS+ KQL+ + D + VW ++ Y F GH+ V
Sbjct: 42 LERHFK--GHRDAVTCVDFSFNMKQLA--SGSMDSCLMVWHMKPQSRAYRFTGHKDAV-- 95
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCG 570
C + + + S + D ++ W+ + G + A H++T+ + + +DG +
Sbjct: 96 TCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRA--HTATVRSVHFCSDGQSFVTAS 153
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMD 628
+K + W+ ++ L + V +F ++A D+ +K WD
Sbjct: 154 DDKT----IKVWSTHR---QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 629 NVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ + S GG + F+ G +A + DN +K+
Sbjct: 207 SRECVHSYCEHGGFVTY--VDFHPSGTCVAAAGMDNTVKV 244
Score = 98 (39.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N ++ DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 269 HPSGNYLVTAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 327
Query: 953 VWSTD 957
VW ++
Sbjct: 328 VWKSN 332
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 70/299 (23%), Positives = 122/299 (40%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+ A++ V +SP+G + L++ + R + H + + FS P
Sbjct: 17 HKAAITSVDFSPNGKQLATGSWDTFLMLWSLR--PQARAFRYV-GHKDVITSVQFS-PLG 72
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L + + DR I++W K F+ H +PV S+ + QF+ S + D IK W
Sbjct: 73 NL-LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSV--DFSADGQFLASASEDKSIKVW 129
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
+ R Y H+ + +S DG + SC +K + W+ + +
Sbjct: 130 --NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTNKQCVNNFS 183
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDA-DGGLQASPCIRFNKE 653
V F+ +AG + +K WD+ LL GG+ C+ F+
Sbjct: 184 DF-VGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN---CVSFHPS 239
Query: 654 GILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANV 712
G L +++D +KIL +G RL+ T++ T V + + K + T G A+A V
Sbjct: 240 GNYLITASSDGTLKILDLLEG-RLIYTLQGHT---GPVFTVSFSKGGELFTSGGADAQV 294
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 41/169 (24%), Positives = 77/169 (45%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ K+W+ + + SD+ N V ++P+GT A S H V ++ ++L
Sbjct: 166 KTIKIWDT---TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRV-NKLL 221
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
H ++ H G VN ++F +P+ ++T D +K+ D + G Y +GH PV+++
Sbjct: 222 QHYQV--HSGGVNCVSF-HPSGNY-LITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 515 PHHKENIQFIFSTATDGKIKAWL--YDNLG---------SRVDYDAPGH 552
+ + S D ++ W +D L R+ +D+P H
Sbjct: 278 --FSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLHFDSPPH 324
Score = 123 (48.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 46/211 (21%), Positives = 88/211 (41%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H ++ + FS KQL+ T D + +W + + + GH+ + S+
Sbjct: 15 KGHKAAITSVDFSPNGKQLA--TGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLG 72
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYL 579
N+ + S + D I+ W+ D G ++ A + +SADG L S +K +
Sbjct: 73 NL--LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS----I 126
Query: 580 VEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASID 637
WN +R + L + + V +F ++ ++ IK WD N + +
Sbjct: 127 KVWNMYR---QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 638 ADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + FN G +A + +D+ +KI
Sbjct: 184 DFVGF--ANFVAFNPNGTCIASAGSDHTVKI 212
Score = 82 (33.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I D +++I ++ + L+GH + ++FS + S GAD+Q+
Sbjct: 237 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVL 295
Query: 953 VWSTD 957
+W T+
Sbjct: 296 LWRTN 300
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 140 (54.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 62 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 117
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 176 VKL--WDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 232 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Score = 122 (48.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L+ +G + N+ ++ H
Sbjct: 52 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG--DCDNYATLKGH 108
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 109 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 165
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 166 LVCTGSDDGTVKLW 179
Score = 67 (28.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + IA G D + +++ + KL GH I +AF +++S+ +D +L
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+ A++ + SP+G A + L+ + R + + H V + FS P+
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFK--PHARAYRYV-GHKDVVTSVQFS-PHG 72
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L + + DR +++W K F+ H +PV S+ + QF+ + + D IK W
Sbjct: 73 NL-LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV--DFSADGQFLATASEDKSIKVW 129
Query: 537 -LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
+Y R Y H+ + +S DG + SC +K + W+ + K+
Sbjct: 130 SMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT----IKIWDTTN---KQCV 179
Query: 594 HGLGKRSVGV---VQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDA-DGGLQASPCIR 649
+ SVG V F+ + +AG + +K WD+ LL GG+ CI
Sbjct: 180 NNFSD-SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN---CIS 235
Query: 650 FNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAPAIGTFGSAN 709
F+ G L +++D +KIL +G RL+ T++ T V + + K + G A+
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEG-RLIYTLQGHT---GPVFTVSFSKGGELFASGGAD 291
Query: 710 ANV 712
V
Sbjct: 292 TQV 294
Score = 126 (49.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/213 (23%), Positives = 90/213 (42%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI--CPHH 517
+ H ++ L S KQL+ T D + +W+ + Y + GH+ V S+ PH
Sbjct: 15 KGHKAAITSLDLSPNGKQLA--TASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG 72
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGES 577
N+ + S + D ++ W+ D G ++ A + +SADG L T E +S
Sbjct: 73 --NL--LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL---ATASEDKS 125
Query: 578 YLVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
V W+ +R + L + + V +F ++ ++ IK WD N + +
Sbjct: 126 IKV-WSMYR---QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + FN G +A + +D +K+
Sbjct: 182 FSDSVGF--ANFVDFNPSGTCIASAGSDQTVKV 212
Score = 86 (35.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I D +++I ++ + L+GH + ++FS + S GAD+Q+
Sbjct: 237 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 953 VWSTDGWEKQASKFLTIPNGRTASALADTRVQFHLDQT-HLLAV-------HETQIAIYE 1004
+W T+ +++ K LT N + + H D HLL + HE ++ E
Sbjct: 296 LWRTN-FDELHCKGLTKRNLK----------RLHFDSPPHLLDIYPRTPHPHEEKVETVE 344
Query: 1005 A-PKLECL 1011
PKLE +
Sbjct: 345 INPKLEVI 352
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 134 (52.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 52/204 (25%), Positives = 93/204 (45%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H G VN AFS P+ + +++T +D + VW +G + GH PV S C +
Sbjct: 25 HHGEVNCSAFS-PDGR-TLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCC--FSPDG 80
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYL 579
+ I S+++D I+ W D S+ + GH ++ +++S D +L S G +K
Sbjct: 81 RLIASSSSDHSIRLW--DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRA---- 134
Query: 580 VEWNESEGAVKRTYHGLGK-RSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASI- 636
+ W G +R + +G S+ F T + LA G + + WD+ + S
Sbjct: 135 IVWEVQSG--RRVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLRASTPVVSYH 191
Query: 637 DADGGLQASPCIRFNKEGILLAVS 660
+ +G C+ ++ G+L + S
Sbjct: 192 NLEGHTGNISCLCYSASGLLASGS 215
Score = 70 (29.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+ ++A G D +I ++ + + +LKGH + LAFS L S+G + VW
Sbjct: 208 SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 63/254 (24%), Positives = 107/254 (42%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L +H + R + H +V + FS P+ L + + D+ +++W + +F
Sbjct: 43 LMVWHMKPQSRAY-RFTGHKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNVKGESTVF 99
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGK-IKAWLYDNLGSRVDYDAPGHSSTMMA--YS 560
H + V S+ H + Q F TA+D K +K W + + H + + +S
Sbjct: 100 RAHTATVRSV--HFCSDGQS-FVTASDDKTVKVWATHR--QKFLFSLSQHINWVRCAKFS 154
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTY--HGLGKRSVGVVQFDTTKNRFLAAGD 618
DG + S +K + W++S +Y HG G V V F + AAG
Sbjct: 155 PDGRLIVSASDDKTVKL----WDKSSRECVHSYCEHG-G--FVTYVDFHPSGTCIAAAGM 207
Query: 619 EFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLL 678
+ +K WD+ LL A + F+ G L +++D+ +KIL +G RLL
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSA--AVNGLSFHPSGNYLITASSDSTLKILDLMEG-RLL 264
Query: 679 RTVESRTFDASRVA 692
T+ A+ VA
Sbjct: 265 YTLHGHQGPATTVA 278
Score = 111 (44.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 45/218 (20%), Positives = 89/218 (40%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L H + H +V + FS KQL+ + D + VW ++ Y F GH+ V
Sbjct: 11 LERHFK--GHRDAVTCVDFSINTKQLA--SGSMDSCLMVWHMKPQSRAYRFTGHKDAV-- 64
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCG 570
C + + + S + D ++ W+ + G + A H++T+ + + +DG +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRA--HTATVRSVHFCSDGQSFVTAS 122
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNV 630
+K + + + + + H V +F ++A D+ +K WD +
Sbjct: 123 DDKTVKVWAT--HRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDDKTVKLWDKSSR 177
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ S GG + F+ G +A + DN +K+
Sbjct: 178 ECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDNTVKV 213
Score = 99 (39.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 238 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 953 VWSTD 957
VW ++
Sbjct: 297 VWKSN 301
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 155 (59.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 72/297 (24%), Positives = 112/297 (37%)
Query: 379 GDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYS 438
G V L + G V KV L S + SL + + SPD + A
Sbjct: 25 GKVQLDQTGQHV-FCVCGTKVNVLDVASGAVLRSLEQEDQEDITAFELSPDDQVLVTATR 83
Query: 439 KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGT 498
++ + + G R I H V +AF P L + T G D ++VWD V
Sbjct: 84 ALLLAQWAWREGSITRLWKAI--HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDIVRHY 139
Query: 499 KQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA 558
+ F G V+ + H +FS+A D I+ W + A + T +
Sbjct: 140 GTHHFRGSPGVVHLVTFHPDPARLLLFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLT 199
Query: 559 YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVV-------QFDTTKN 611
+SADG + S G +K V W+ RT V+ + D
Sbjct: 200 FSADGHTMLSSGRDK----ICVIWDLQSHQATRTVPVFESVEAAVLLPEELVPKLDVKSK 255
Query: 612 --RFLAAGDEFMIKFWDMDNVNLL-ASIDADGGLQA-SPCIRFNKEGILLAVSTNDN 664
FL AGD+ +++ W+ + + A G Q + C G+LL+V+T+ N
Sbjct: 256 GLHFLTAGDQGLLRVWEAASGQCVYAQPQPPGPRQGLTHCTLAQSAGLLLSVTTDHN 312
Score = 61 (26.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A G +D + +++ + ++ GH++ + + FS VL ++ AD + +
Sbjct: 486 PNDK-LLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKL 544
Query: 954 WS 955
W+
Sbjct: 545 WA 546
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 16/61 (26%), Positives = 35/61 (57%)
Query: 906 DSSIQIYNVRVDE-VKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQAS 964
D ++++ ++ +E VKT L H+ ++ GL S + ++ +DS + +W D E++ S
Sbjct: 583 DGLVKLWTIKNNECVKT-LDAHEDKVWGLHCSRLDDRALTGASDSCVILWK-DVTEEEQS 640
Query: 965 K 965
+
Sbjct: 641 E 641
Score = 59 (25.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 12/61 (19%), Positives = 28/61 (45%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P+D++I+ + S++++ ++ + L GH + L + S D +C+
Sbjct: 342 PEDSHIV-VASNSPSLKVFELQTMTCQI-LHGHTDIVLALDVFRKGRLFASCAKDQSICI 399
Query: 954 W 954
W
Sbjct: 400 W 400
Score = 51 (23.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVS--SGADSQL 951
P D ++A D +I+++ ++ +GH + + F + L+S SG+D +
Sbjct: 528 PMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLV 586
Query: 952 CVWS 955
+W+
Sbjct: 587 KLWT 590
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 130 (50.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ + + D+ IK+W+ TG
Sbjct: 366 LFLWRPAEDKKPLERMTGHQALINQVLFS-PDTRI-IASASFDKSIKLWEGRTGKYLTSL 423
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH S VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 424 RGHVSAVYQIA--WSADSRLLVSGSSDSTLKVW--DAETKKLAIDLPGHADEVFATDWSP 479
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 480 DGQRVASGGKDK 491
Score = 114 (45.2 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 50/205 (24%), Positives = 83/205 (40%)
Query: 397 FKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNH 456
F+V + C+ L+ +T +V V +SP G V + E
Sbjct: 111 FRVRAVTRCTSSLEG-----HTEAVISVAFSPTGKYLASGSGDTTVRFWDL--STETPQ- 162
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTK-QYIFEGHESPVYSIC- 514
+ H V +A+S K+L+ C ++ +WD TG + + GH + +C
Sbjct: 163 FTAKGHRHWVLSIAWSPDGKKLAS-GCKNSQIF-LWDPATGNQIGRVLTGHSKWITCLCW 220
Query: 515 -PHH-KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGH--SSTMMAYSADGARLFSCG 570
P H +++ S + DG I+ W D L R D GH S T + + DG L+S
Sbjct: 221 EPLHINPECRYLASASKDGSIRIW--DTLMGRCDKILTGHTQSVTCVKWGGDGL-LYSSS 277
Query: 571 TNKEGESYLVEWNESEGAVKRTYHG 595
++ + W +G + RT G
Sbjct: 278 QDRT----IKVWRSQDGILCRTLQG 298
Score = 110 (43.8 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 56/218 (25%), Positives = 94/218 (43%)
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMM--AYSA 561
EGH V S+ +++ S + D ++ W D + A GH ++ A+S
Sbjct: 124 EGHTEAVISVA--FSPTGKYLASGSGDTTVRFW--DLSTETPQFTAKGHRHWVLSIAWSP 179
Query: 562 DGARLFSCGTNKEGESYLVEWNESEG-AVKRTYHGLGKRSVGVVQFDTTKN---RFLA-A 616
DG +L S G K + +L W+ + G + R G K + N R+LA A
Sbjct: 180 DGKKLAS-GC-KNSQIFL--WDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASA 235
Query: 617 GDEFMIKFWDMDNVNLLASIDA--DGGLQASPCIRFNKEGILLAVSTNDNGIKILANADG 674
+ I+ WD L+ D G Q+ C+++ +G+L + S+ D IK+ + DG
Sbjct: 236 SKDGSIRIWD----TLMGRCDKILTGHTQSVTCVKWGGDGLLYS-SSQDRTIKVWRSQDG 290
Query: 675 IRLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANV 712
I L RT++ + +A + G F A A +
Sbjct: 291 I-LCRTLQGHAHWVNTMALSTDYVLRT-GAFEPAEATI 326
Score = 98 (39.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D IIA D SI+++ R + T L+GH + +A+S +LVS +DS L VW
Sbjct: 396 DTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWD 455
Query: 956 TD 957
+
Sbjct: 456 AE 457
Score = 68 (29.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++ ++ L GH + +S + S G D L +W
Sbjct: 438 DSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 903 GMEDSSIQIYNVRVDEVKT-KLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEK 961
G +D ++ ++ D+ ++ GHQ I + FS ++ S+ D + +W E
Sbjct: 360 GSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLW-----EG 414
Query: 962 QASKFLTIPNGRTAS 976
+ K+LT G ++
Sbjct: 415 RTGKYLTSLRGHVSA 429
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 131 (51.2 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
VV+ D ++VWD TG ++ GH + V C + + + S A D +K W D
Sbjct: 354 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDG--RRVVSGAYDFMVKVW--D 407
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GH++ + + DG + S G+ ++ + W+ G T G
Sbjct: 408 PETETCLHTLQGHTNRVYSLQFDGIHVVS-GSL---DTSIRVWDVETGNCIHTLTGHQSL 463
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQAS-PCIRFNKEGILL 657
+ G+ K+ L +G+ + +K WD+ L ++ Q++ C++FNK ++
Sbjct: 464 TSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI- 518
Query: 658 AVSTNDNGIKI--LANADGIRLLRTVES 683
S++D +K+ L + IR L T+ES
Sbjct: 519 -TSSDDGTVKLWDLKTGEFIRNLVTLES 545
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 70/294 (23%), Positives = 123/294 (41%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 304 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 355
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 356 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 408
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 409 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 462
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 463 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 518
Query: 615 AAGDEFMIKFWDMDN---VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
+ D+ +K WD+ + L ++++ G IR + ++ AV + NG
Sbjct: 519 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NG 571
Score = 127 (49.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 329
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 330 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 382
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 383 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 417
Score = 86 (35.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W D
Sbjct: 434 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW--DIK 489
Query: 960 EKQASKFLTIPNGRTASALADTRVQFH 986
Q + L PN + SA+ T +QF+
Sbjct: 490 TGQCLQTLQGPN-KHQSAV--TCLQFN 513
Score = 78 (32.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 471 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKL 528
Query: 954 W 954
W
Sbjct: 529 W 529
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 132 (51.5 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 51/212 (24%), Positives = 92/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +P ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 89 LSGHEGEVYCCKF-HPWGN-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 144
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 202
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 203 VKL--WDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 258
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN ++I
Sbjct: 259 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRI 288
Score = 116 (45.9 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P G A ++ L+ +G + N+ ++ H
Sbjct: 79 CSS-LQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYG--DCDNYATLKGH 135
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 136 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 192
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 193 LVCTGSDDGTVKLW 206
Score = 64 (27.6 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + IA G D + +++ + KL GH + LAF +++S+ +D +L
Sbjct: 323 DGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 52 (23.4 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 16/52 (30%), Positives = 19/52 (36%)
Query: 238 PFQPTPAALPTSLAGWMANPSPVPHPSPSAGPXXXXXXXXXXXXXKRPRTPP 289
P P P +P G A +P P P+ GP KRPR P
Sbjct: 9 PGGPVPGPVPGPAPGPGAGSAPGAAPGPTPGPDLPLVPSAA----KRPRHDP 56
Score = 48 (22.0 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 205 GQPNGARAPSPVTNPLMGAVPKAGAFPPLSAHGPFQPTPAALP 247
G P P P P G+ P A P P P+ A P
Sbjct: 10 GGPVPGPVPGPAPGPGAGSAPGAAPGPTPGPDLPLVPSAAKRP 52
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 140 (54.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 63 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 118
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 177 VKL--WDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 233 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 122 (48.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L+ +G + N+ ++ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG--DCDNYATLKGH 109
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 167 LVCTGSDDGTVKLW 180
Score = 65 (27.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + IA G D + +++ + KL GH I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 140 (54.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 63 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 118
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 177 VKL--WDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 233 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 122 (48.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L+ +G + N+ ++ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG--DCDNYATLKGH 109
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 167 LVCTGSDDGTVKLW 180
Score = 65 (27.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + IA G D + +++ + KL GH I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 140 (54.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 63 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 118
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 177 VKL--WDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 233 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 122 (48.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L+ +G + N+ ++ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG--DCDNYATLKGH 109
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 167 LVCTGSDDGTVKLW 180
Score = 65 (27.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + IA G D + +++ + KL GH I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 124 (48.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 43/158 (27%), Positives = 75/158 (47%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AV G GH V+S NI I S +TD +K W D
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS--SQMSGNI--IISGSTDRTLKVWDMD 1063
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ G+ V + GH+ST+ G+++ S G+ ++ L W+ +G+ G
Sbjct: 1064 S-GACV-HTLQGHTSTVRCMHLHGSKVVS-GSR---DATLRVWDIEQGSCLHVLVG-HLA 1116
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASI 636
+V VQ+D + + +G ++M+K W + L ++
Sbjct: 1117 AVRCVQYD---GKLIVSGAYDYMVKIWHPERQECLHTL 1151
Score = 99 (39.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/154 (25%), Positives = 66/154 (42%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH-HKENIQFIFSTATDGKIKAWLY 538
+++ DR +KVWD +G + +GH S V C H H + S + D ++ W
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLHGSKV---VSGSRDATLRVWDI 1102
Query: 539 DNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVE-WNESEGAVKRTYHGLG 597
+ GS + + GH + + DG +L G Y+V+ W+ T G
Sbjct: 1103 EQ-GSCL-HVLVGHLAAVRCVQYDG-KLIVSGAY----DYMVKIWHPERQECLHTLQGHT 1155
Query: 598 KRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
R V +QFD ++ + I+ WD++ N
Sbjct: 1156 NR-VYSLQFDGL--HVVSGSLDTSIRVWDVETGN 1186
Score = 97 (39.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS-TDG 958
+ G D+SI++++V K L GHQ +G+ N+LVS ADS + VW T G
Sbjct: 1168 VVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ--NILVSGNADSTVKVWDITTG 1225
Query: 959 WEKQASKFLTIPNGRTASALADTRVQFH 986
Q + L+ PN + SA+ T +QF+
Sbjct: 1226 ---QCLQTLSGPN-KHHSAV--TCLQFN 1247
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 898 NIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCVW 954
NI+ G DS+++++++ + L G H +T L F++ +V+S D + +W
Sbjct: 1206 NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRF--VVTSSDDGTVKLW 1263
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
VV+ D ++VWD TG ++ GH + V C + + + S A D +K W D
Sbjct: 394 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDG--RRVVSGAYDFMVKVW--D 447
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GH++ + + DG + S G+ ++ + W+ G T G
Sbjct: 448 PETETCLHTLQGHTNRVYSLQFDGIHVVS-GSL---DTSIRVWDVETGNCIHTLTGHQSL 503
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQAS-PCIRFNKEGILL 657
+ G+ K+ L +G+ + +K WD+ L ++ Q++ C++FNK ++
Sbjct: 504 TSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI- 558
Query: 658 AVSTNDNGIKI--LANADGIRLLRTVES 683
S++D +K+ L + IR L T+ES
Sbjct: 559 -TSSDDGTVKLWDLKTGEFIRNLVTLES 585
Score = 128 (50.1 bits), Expect = 0.00022, P = 0.00022
Identities = 70/294 (23%), Positives = 123/294 (41%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 344 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 395
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 396 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 448
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 449 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 502
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 503 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 558
Query: 615 AAGDEFMIKFWDMDN---VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
+ D+ +K WD+ + L ++++ G IR + ++ AV + NG
Sbjct: 559 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NG 611
Score = 127 (49.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 369
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 370 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 422
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 423 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 457
Score = 86 (35.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W D
Sbjct: 474 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW--DIK 529
Query: 960 EKQASKFLTIPNGRTASALADTRVQFH 986
Q + L PN + SA+ T +QF+
Sbjct: 530 TGQCLQTLQGPN-KHQSAV--TCLQFN 553
Score = 78 (32.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 511 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKL 568
Query: 954 W 954
W
Sbjct: 569 W 569
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 130 (50.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 50/220 (22%), Positives = 93/220 (42%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 608 SRLVVRPHTDAVYHACFSEDGQRIA--SCGVDKTLQVFKAETGEKLLEIKAHEDEV--LC 663
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVD-YDAPGHSSTM-MAYSADGARLFSCGTN 572
+ +FI + + D K+K W G V YD HS + + + + T
Sbjct: 664 CAFSTDDRFIATCSVDKKVKIW-NSMTGGLVHVYDE--HSEQVNCCHFTNNSHYLLLAT- 719
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL 632
+ +L W+ ++ + T G SV +F + + +K WD+ + N
Sbjct: 720 ASSDCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE 778
Query: 633 LASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANA 672
SI+ S + + E I+ S + +G +I+ A
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAA 818
Score = 126 (49.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + ++ G++L LEI+AH V AFS ++
Sbjct: 615 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDR 671
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF-STAT-DGKIK 534
+ TC D+ +K+W+++TG ++++ H V C H N ++ +TA+ D +K
Sbjct: 672 --FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYLLLATASSDCFLK 727
Query: 535 AWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
W + R +S +S D L SC +
Sbjct: 728 LWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 765
Score = 109 (43.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 46/222 (20%), Positives = 91/222 (40%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H VN F+ + L + T D +K+WD + GH + V + C +
Sbjct: 697 DEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV-NHCRFSPD 755
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSR---------VDYDAPGHSSTMM----AYSADGARL 566
+ + + S + DG +K W + R ++ + P ++ ++SADG R+
Sbjct: 756 D-KLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRI 814
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
NK +L + + G + H ++ F + + A + ++ W+
Sbjct: 815 MVAAKNK---IFLFDIHT--GGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWN 869
Query: 627 MDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
MD+ +A D G L C+ F+ +G S++D I++
Sbjct: 870 MDSCLKVA--DCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 909
Score = 90 (36.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
IA G ED +++I + + + GH+K + + F++ L+SS DS + VW+ W
Sbjct: 977 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 1033
Query: 960 EKQASKFL 967
+ + FL
Sbjct: 1034 QSEEYVFL 1041
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/114 (17%), Positives = 43/114 (37%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
E V C + S + + +M A+ KI LF+ N++ +
Sbjct: 799 EVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVV 858
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+ ++++N+ +GH + + FS + ++S D + +W T
Sbjct: 859 ALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 912
Score = 60 (26.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D + +DSSIQ++N + +E L+ HQ+ + + L+S D + +WS
Sbjct: 1015 DGKTLISSSDDSSIQVWNWQSEEY-VFLQAHQETVKDFKLLKN-SKLLSWSFDGTVKIWS 1072
Score = 51 (23.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDE---------VKTKLKGHQKRITGLAFSNTLNVLVSSG 946
D+ ++A G ++ I+I+NV E V+ H +T L FS +LVS+G
Sbjct: 1139 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1198
Score = 43 (20.2 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V + +T+ G +++ + ++ ++W W E
Sbjct: 1007 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEE 1037
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 130 (50.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 50/220 (22%), Positives = 93/220 (42%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 615 SRLVVRPHTDAVYHACFSEDGQRIA--SCGVDKTLQVFKAETGEKLLEIKAHEDEV--LC 670
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVD-YDAPGHSSTM-MAYSADGARLFSCGTN 572
+ +FI + + D K+K W G V YD HS + + + + T
Sbjct: 671 CAFSTDDRFIATCSVDKKVKIW-NSMTGGLVHVYDE--HSEQVNCCHFTNNSHYLLLAT- 726
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL 632
+ +L W+ ++ + T G SV +F + + +K WD+ + N
Sbjct: 727 ASSDCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANE 785
Query: 633 LASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANA 672
SI+ S + + E I+ S + +G +I+ A
Sbjct: 786 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAA 825
Score = 126 (49.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + ++ G++L LEI+AH V AFS ++
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDR 678
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF-STAT-DGKIK 534
+ TC D+ +K+W+++TG ++++ H V C H N ++ +TA+ D +K
Sbjct: 679 --FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYLLLATASSDCFLK 734
Query: 535 AWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
W + R +S +S D L SC +
Sbjct: 735 LWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 772
Score = 109 (43.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 46/222 (20%), Positives = 91/222 (40%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H VN F+ + L + T D +K+WD + GH + V + C +
Sbjct: 704 DEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV-NHCRFSPD 762
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSR---------VDYDAPGHSSTMM----AYSADGARL 566
+ + + S + DG +K W + R ++ + P ++ ++SADG R+
Sbjct: 763 D-KLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRI 821
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
NK +L + + G + H ++ F + + A + ++ W+
Sbjct: 822 MVAAKNK---IFLFDIHT--GGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQCCVELWN 876
Query: 627 MDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
MD+ +A D G L C+ F+ +G S++D I++
Sbjct: 877 MDSCLKVA--DCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 916
Score = 90 (36.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
IA G ED +++I + + + GH+K + + F++ L+SS DS + VW+ W
Sbjct: 984 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 1040
Query: 960 EKQASKFL 967
+ + FL
Sbjct: 1041 QSEEYVFL 1048
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/114 (17%), Positives = 43/114 (37%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
E V C + S + + +M A+ KI LF+ N++ +
Sbjct: 806 EVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVV 865
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+ ++++N+ +GH + + FS + ++S D + +W T
Sbjct: 866 ALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 919
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D + +DSSIQ++N + +E L+ HQ+ + F N S+L WS
Sbjct: 1022 DGKTLISSSDDSSIQVWNWQSEEY-VFLQAHQETVKD--FKLLKN--------SKLLSWS 1070
Query: 956 TDGWEKQASKFLT 968
DG K+ +T
Sbjct: 1071 FDGTVKKIWSIIT 1083
Score = 51 (23.0 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDE---------VKTKLKGHQKRITGLAFSNTLNVLVSSG 946
D+ ++A G ++ I+I+NV E V+ H +T L FS +LVS+G
Sbjct: 1147 DSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1206
Score = 43 (20.2 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V + +T+ G +++ + ++ ++W W E
Sbjct: 1014 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEE 1044
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 148 (57.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 72/310 (23%), Positives = 121/310 (39%)
Query: 379 GDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYS 438
G L + G + V +V L S + SL + + SPD + A
Sbjct: 28 GKAQLDQTG-QHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITAFDLSPDNEVLVTASR 86
Query: 439 KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGT 498
++ + + G R I H V +AF P L + T G D ++VWD V
Sbjct: 87 ALLLAQWAWQEGSVTRLWKAI--HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDIVRHY 142
Query: 499 KQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA 558
+ F G V+ + H +FS+ATD I+ W + A + T +A
Sbjct: 143 GTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLA 202
Query: 559 YSADGARLFSCGTNKEGESYLVEWNESEGAVKRT---YHG------LGKRSVGVVQFDTT 609
+SADG + S G +K + W+ RT + L + V + +
Sbjct: 203 FSADGHTMLSSGRDK----ICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSP 258
Query: 610 KNRFLAAGDEFMIKFWDMDNVNLL-ASIDADG-GLQASPCIRFNKEGILLAVSTNDNGIK 667
FL AGD+ ++ W+ + + G G + + C + G++L +T D+ +
Sbjct: 259 GLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLT-ATADHNL- 316
Query: 668 ILANADGIRL 677
+L A +RL
Sbjct: 317 LLYEARSLRL 326
Score = 66 (28.3 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A D +I+++ ++ +GH + +AF + L+SSG+D + +
Sbjct: 531 PMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKL 589
Query: 954 WS 955
W+
Sbjct: 590 WT 591
Score = 45 (20.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V ++ + + G +L+ S+ + KLW NE
Sbjct: 566 VLKVAFVSRGTQLLSSGSDGLVKLWTIKNNE 596
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/96 (20%), Positives = 36/96 (37%)
Query: 918 EVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASKFLTIPNGRTASA 977
+ +T + H K I +A + +L + D +W+ + L + +G
Sbjct: 470 QAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALP-----QCQLLGVFSGHRRGL 524
Query: 978 LADTRVQFH-LDQTHLLAVHETQIAIYEAPKLECLK 1012
VQF +DQ A + I ++ CLK
Sbjct: 525 WC---VQFSPMDQVLATASADGTIKLWALQDFSCLK 557
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
VV+ D ++VWD TG ++ GH + V C + + + S A D +K W D
Sbjct: 474 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDG--RRVVSGAYDFMVKVW--D 527
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GH++ + + DG + S G+ ++ + W+ G T G
Sbjct: 528 PETETCLHTLQGHTNRVYSLQFDGIHVVS-GSL---DTSIRVWDVETGNCIHTLTGHQSL 583
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQAS-PCIRFNKEGILL 657
+ G+ K+ L +G+ + +K WD+ L ++ Q++ C++FNK ++
Sbjct: 584 TSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI- 638
Query: 658 AVSTNDNGIKI--LANADGIRLLRTVES 683
S++D +K+ L + IR L T+ES
Sbjct: 639 -TSSDDGTVKLWDLKTGEFIRNLVTLES 665
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 70/294 (23%), Positives = 123/294 (41%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 424 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 475
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 476 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 528
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 529 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 582
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 583 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 638
Query: 615 AAGDEFMIKFWDMDN---VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
+ D+ +K WD+ + L ++++ G IR + ++ AV + NG
Sbjct: 639 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NG 691
Score = 127 (49.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 449
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 450 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 502
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 503 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 537
Score = 86 (35.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W D
Sbjct: 554 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW--DIK 609
Query: 960 EKQASKFLTIPNGRTASALADTRVQFH 986
Q + L PN + SA+ T +QF+
Sbjct: 610 TGQCLQTLQGPN-KHQSAV--TCLQFN 633
Score = 78 (32.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 591 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKL 648
Query: 954 W 954
W
Sbjct: 649 W 649
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
VV+ D ++VWD TG ++ GH + V C + + + S A D +K W D
Sbjct: 479 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDG--RRVVSGAYDFMVKVW--D 532
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GH++ + + DG + S G+ ++ + W+ G T G
Sbjct: 533 PETETCLHTLQGHTNRVYSLQFDGIHVVS-GSL---DTSIRVWDVETGNCIHTLTGHQSL 588
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQAS-PCIRFNKEGILL 657
+ G+ K+ L +G+ + +K WD+ L ++ Q++ C++FNK ++
Sbjct: 589 TSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI- 643
Query: 658 AVSTNDNGIKI--LANADGIRLLRTVES 683
S++D +K+ L + IR L T+ES
Sbjct: 644 -TSSDDGTVKLWDLKTGEFIRNLVTLES 670
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 70/294 (23%), Positives = 123/294 (41%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 429 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 480
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 481 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 533
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 534 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 587
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 588 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 643
Query: 615 AAGDEFMIKFWDMDN---VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
+ D+ +K WD+ + L ++++ G IR + ++ AV + NG
Sbjct: 644 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NG 696
Score = 127 (49.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 454
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 455 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 507
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 508 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 542
Score = 86 (35.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W D
Sbjct: 559 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW--DIK 614
Query: 960 EKQASKFLTIPNGRTASALADTRVQFH 986
Q + L PN + SA+ T +QF+
Sbjct: 615 TGQCLQTLQGPN-KHQSAV--TCLQFN 638
Score = 78 (32.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 596 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKL 653
Query: 954 W 954
W
Sbjct: 654 W 654
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 69/270 (25%), Positives = 116/270 (42%)
Query: 453 LRNHLEIEAHVGS---VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESP 509
L+ H +VG V L FS P L + + D+ +++W K F+ H +P
Sbjct: 47 LKPHARAYRYVGHKDVVTSLQFS-PQGNL-LASASRDKTVRLWVLDRKGKSSEFKAHTAP 104
Query: 510 VYSICPHHKENIQFIFSTATDGKIKAW-LYDNLGSRVDYDAPGHSSTMMA--YSADGARL 566
V S+ + QF+ + + D IK W +Y R Y H+ + +S DG +
Sbjct: 105 VRSV--DFSADGQFLVTASEDKSIKVWSMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLI 159
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQF-DTTKNR--FLAAGDEFMIK 623
SC +K + W+ + K+ + SVG F D + N +AG + ++
Sbjct: 160 VSCSEDKT----IKIWDTTS---KQCVNNFSD-SVGFANFVDFSPNGTCIASAGSDHAVR 211
Query: 624 FWDMDNVNLLASIDADG-GLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVE 682
WD+ LL G+ C+ F+ G L +++D +KIL +G RL+ T++
Sbjct: 212 IWDIRMNRLLQHYQVHSCGVN---CLSFHPSGNSLVTASSDGTVKILDLVEG-RLIYTLQ 267
Query: 683 SRTFDASRVASAAIVKAPAIGTFGSANANV 712
T V + + K + T G A+A V
Sbjct: 268 GHT---GPVFTVSFSKDGELFTSGGADAQV 294
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/142 (28%), Positives = 66/142 (46%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ K+W+ + + SD N V +SP+GT A S H V ++ + L
Sbjct: 166 KTIKIWDTTSKQC---VNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRM-NRLL 221
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
H ++ H VN L+F +P+ S+VT D +K+ D V G Y +GH PV+++
Sbjct: 222 QHYQV--HSCGVNCLSF-HPSGN-SLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVS 277
Query: 515 PHHKENIQFIFSTATDGKIKAW 536
K+ F S D ++ W
Sbjct: 278 -FSKDGELFT-SGGADAQVLVW 297
Score = 116 (45.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 46/212 (21%), Positives = 91/212 (42%)
Query: 460 EAHVGSVNDLAFSYPN-KQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+ H ++ FS PN KQ++ T D + +W + Y + GH+ V S+ +
Sbjct: 15 KGHKAAITSADFS-PNCKQIA--TASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESY 578
N+ + S + D ++ W+ D G ++ A + +SADG L T E +S
Sbjct: 72 GNL--LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLV---TASEDKSI 126
Query: 579 LVEWNESEGAVKRTYHGLGKRS--VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
V W+ +R + L + + V +F ++ ++ IK WD + + +
Sbjct: 127 KV-WSMYR---QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + F+ G +A + +D+ ++I
Sbjct: 183 SDSVGF--ANFVDFSPNGTCIASAGSDHAVRI 212
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N+++ D +++I ++ + L+GH + ++FS + S GAD+Q+
Sbjct: 237 HPSGNSLVTAS-SDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
Query: 953 VWST 956
VW T
Sbjct: 296 VWRT 299
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 151 (58.2 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 49/222 (22%), Positives = 93/222 (41%)
Query: 406 SMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGS 465
S+ L S + ++V + ++P GTL + L+ HG + +N + ++ H +
Sbjct: 41 SLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG--DCKNFMVLKGHKNA 98
Query: 466 VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF 525
+ DL ++ Q +V+ D+ ++ WD TG + H S V S CP + I
Sbjct: 99 ILDLHWTSDGSQ--IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRR-GPPLII 155
Query: 526 STATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNES 585
S + DG K W G+ + + T +++S ++F+ G + + + W+
Sbjct: 156 SGSDDGTAKLWDMRQRGA-IQTFPDKYQITAVSFSDAADKIFTGGVDND----VKVWDLR 210
Query: 586 EGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDM 627
+G T G G+ + L G + + WDM
Sbjct: 211 KGEATMTLEGHQDTITGM-SLSPDGSYLLTNGMDNKLCVWDM 251
Score = 109 (43.4 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
I G D+ ++++++R E L+GHQ ITG++ S + L+++G D++LCVW
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 56 (24.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 25/91 (27%), Positives = 42/91 (46%)
Query: 342 TDDLPKTVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWE 401
T L +++ SAV +M F+P L+ G++ ++ LW V K+F V +
Sbjct: 39 TSSLEAPIMLLSGHPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHGD----CKNFMVLK 93
Query: 402 LGACSMPLQASLSSDYTASVNRVMWSPDGTL 432
G + L +SD + V+ SPD T+
Sbjct: 94 -GHKNAILDLHWTSDGSQIVSA---SPDKTV 120
Score = 49 (22.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL 951
D + G D + I++ KL GH + F T ++ S +D +
Sbjct: 283 DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 143 (55.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 74/310 (23%), Positives = 120/310 (38%)
Query: 379 GDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYS 438
G V L + G + V +V L S + SL + + SPD + A
Sbjct: 28 GKVQLDQTG-QHLFCVCGTRVNILDVASGAVLRSLEQEDQEDITAFDLSPDDKVLVTASR 86
Query: 439 KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGT 498
++ + + G R I H V +AF P L + T G D ++VWD V
Sbjct: 87 ALLLAQWAWQEGSVTRLWKAI--HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDVVRCY 142
Query: 499 KQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA 558
+ F G V+ + H +FS+A D I+ W A + T +
Sbjct: 143 GTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLT 202
Query: 559 YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT------TKN- 611
+SADG + S G +K V W+ RT V+ + K+
Sbjct: 203 FSADGHTMLSSGRDK----ICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSA 258
Query: 612 --RFLAAGDEFMIKFWDMDNVNLL-ASIDADG-GLQASPCIRFNKEGILLAVSTNDNGIK 667
FL AGD+ ++ W+ + + A G G + + C + G+LL+V+ + N
Sbjct: 259 GLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHN--L 316
Query: 668 ILANADGIRL 677
+L +A +RL
Sbjct: 317 LLYDAHSLRL 326
Score = 69 (29.3 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A D +I+++ ++ +GH + +AF + L+SSG+D L +
Sbjct: 531 PMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 954 WS 955
W+
Sbjct: 590 WT 591
Score = 45 (20.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V ++ + + G +L+ S+ + KLW NE
Sbjct: 566 VLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE 596
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 142 (55.0 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 63/255 (24%), Positives = 108/255 (42%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGS--VNDLAFSYPNKQLSVV 481
V +S DG ++ +Y G ++ ++ G + + FS L+
Sbjct: 287 VNFSNDGKYLATGCNRS-AQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLA-- 343
Query: 482 TCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDN- 540
T ED+ +KVWD T Q+ F GHE +YS+ + + +FI S + D K K W +
Sbjct: 344 TGAEDKTVKVWDIHTKKIQHTFYGHELDIYSL--DYSSDGRFIVSGSGDKKAKIWDIEKG 401
Query: 541 -----LGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHG 595
LG+ + P + T +A S DG RL + G+ ++ + W+ G Y G
Sbjct: 402 KCAFTLGN--EEVGPKNGVTSVAMSPDG-RLVAAGSL---DNIVRLWDAQTGYFLERYEG 455
Query: 596 LGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDA--DGGLQASPCIRFNK 652
SV V F + + LA+G + +K WD+ + A +G + F+
Sbjct: 456 -HLDSVYSVAF-SPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP 513
Query: 653 EGILLAVSTNDNGIK 667
+G L + D ++
Sbjct: 514 DGSWLISGSKDRSVQ 528
Score = 66 (28.3 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS---NTLNVLVSSGADSQLC 952
D + + G +D S+Q ++ R L+GH+ + +A S N+ V + D +
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSR 573
Query: 953 VWSTD 957
+W D
Sbjct: 574 LWKYD 578
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 154 (59.3 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 64/225 (28%), Positives = 101/225 (44%)
Query: 421 VNRVMWSPDGTLFGVAYS-KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLS 479
V V+ S DG F ++ S + L+ G+ R + H V +AFS N+Q
Sbjct: 66 VEDVVLSSDGQ-FALSGSWDGELRLWDLATGETTRRFV---GHTKDVLSVAFSTDNRQ-- 119
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKEN--IQFIFSTATDGKIKAWL 537
+V+ DR IK+W+ + K I EG + C N + I S + D +K W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 538 YDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHG 595
N R GHS + +A S DG+ S G K+G L W+ +EG K+ Y
Sbjct: 180 LQNCKLR--NSLVGHSGYLNTVAVSPDGSLCASGG--KDGVILL--WDLAEG--KKLY-S 230
Query: 596 LGKRSVGVVQFDTTKNRF-LAAGDEFMIKFWDMDNVNLLASIDAD 639
L S+ + + NR+ L A E I+ WD+++ +++ + D
Sbjct: 231 LEAGSI-IHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVD 274
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 155 (59.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 59/273 (21%), Positives = 117/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S ++
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSR 127
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +KVW+ TG +GH + Y C + I S + D ++ W
Sbjct: 128 LL--VSGSDDKTLKVWELSTGKSLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 184 --DVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 237
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 238 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 295
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 296 TGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHT 328
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 134 (52.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 51/220 (23%), Positives = 94/220 (42%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 609 SRLVVRPHTDAVYHACFSEDGQRIA--SCGADKTLQVFKAETGEKLLEIKAHEDEV--LC 664
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVD-YDAPGHSSTMMAYSADGARLF-SCGTN 572
+ +FI + + D K+K W G V YD ++ + L + G+N
Sbjct: 665 CAFSADDKFIATCSVDKKVKIW-NSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSN 723
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL 632
+ +L W+ ++ + T G SV +F + + +K WD+ + N
Sbjct: 724 ---DYFLKLWDLNQEECRNTMFG-HTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANE 779
Query: 633 LASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANA 672
SI+ S + + E I+ S + +G KI+ A
Sbjct: 780 RKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAA 819
Score = 122 (48.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + + ++ G++L LEI+AH V AFS +K
Sbjct: 616 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSADDK 672
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ-FIFSTAT-DGKIK 534
+ TC D+ +K+W+++TG I++ H V C H N + +T + D +K
Sbjct: 673 --FIATCSVDKKVKIWNSMTGELVRIYDEHSEQVN--CCHFTNNSNHLLLATGSNDYFLK 728
Query: 535 AWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
W + R +S + +S D L SC +
Sbjct: 729 LWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSAD 766
Score = 121 (47.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 50/222 (22%), Positives = 94/222 (42%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKE 519
+ H VN F+ + L + T D +K+WD + GH + V S C +
Sbjct: 698 DEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSV-SHCRFSPD 756
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSR---------VDYDAPGHSSTMM----AYSADGARL 566
+ Q + S + DG +K W + R ++ + P ++ ++SADGA++
Sbjct: 757 D-QVLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKI 815
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
NK +L + + S G + + G +V F + + A ++ ++ W
Sbjct: 816 MVAAKNKV---FLFDIHSS-GLLAEMHMG-HHSAVQYCDFSPHNHLAVVALSQYCVELWS 870
Query: 627 MDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
MD+ +A D G L C+ F+ +G S++D I++
Sbjct: 871 MDSGLKVA--DCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 910
Score = 82 (33.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+A G ED +IQI + + + GH+ + + F+ L+SS DS + +W+ W
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN---W 1034
Query: 960 EKQASKFL 967
+ + FL
Sbjct: 1035 QSEDPFFL 1042
Score = 59 (25.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/114 (15%), Positives = 43/114 (37%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
E V C + S + + +M A+ K+ LF+ N++ +
Sbjct: 800 EVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVV 859
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+ ++++++ +GH + + FS + ++S D + +W T
Sbjct: 860 ALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 913
Score = 54 (24.1 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D +++++N+ ++ HQ + S+ S+ AD +WS
Sbjct: 1066 DGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWS 1115
Score = 53 (23.7 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 25/109 (22%), Positives = 44/109 (40%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDE---------VKTKLKGHQKRITGLAFSNTLNVLVSSG 946
+N ++A G ++ I+I+NV E V+ H +T L FS +LVS+G
Sbjct: 1140 NNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAG 1199
Query: 947 ADSQLCVWSTDGWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLLAV 995
L W+ E + + N + D + +D +L +
Sbjct: 1200 G--YLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYI 1246
Score = 51 (23.0 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QLCVWSTDGWE 960
D + +I++ + +L+GH+ + +FS N L+++G D+ ++ +W+ E
Sbjct: 1108 DKTAKIWSFELLSPLHELRGHKGCVRCSSFSVN-NTLLATGDDNGEIRIWNVSNGE 1162
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D + +DS++QI+N + ++ L+ HQ+ + +L S D + VW+
Sbjct: 1016 DGKTLISSSDDSAVQIWNWQSED-PFFLQAHQETVKDFRLLKNSRLL-SWSFDGTVKVWN 1073
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 5/27 (18%), Positives = 15/27 (55%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKW 805
V + +T G +++ + ++ ++W W
Sbjct: 1008 VRHIQFTADGKTLISSSDDSAVQIWNW 1034
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 58/273 (21%), Positives = 116/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 74
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 75 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 131 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 184
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 242
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 243 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 275
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 61/281 (21%), Positives = 114/281 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 39 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 95
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 96 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 150
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 151 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 206
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV-VQFDTTKNRFLAAGDEF-MIKFWDM 627
++ L W+ S+G +TY G + F T +++ +G E ++ W++
Sbjct: 207 TL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 262
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ + + S + I A ND IK+
Sbjct: 263 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 303
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
VV+ D ++VWD TG ++ GH + V C + + + S A D +K W D
Sbjct: 527 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDG--RRVVSGAYDFMVKVW--D 580
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GH++ + + DG + S G+ ++ + W+ G T G
Sbjct: 581 PETETCLHTLQGHTNRVYSLQFDGIHVVS-GSL---DTSIRVWDVETGNCIHTLTGHQSL 636
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQAS-PCIRFNKEGILL 657
+ G+ K+ L +G+ + +K WD+ L ++ Q++ C++FNK ++
Sbjct: 637 TSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVI- 691
Query: 658 AVSTNDNGIKI--LANADGIRLLRTVES 683
S++D +K+ L + IR L T+ES
Sbjct: 692 -TSSDDGTVKLWDLRTGEFIRNLVTLES 718
Score = 127 (49.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 502
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 503 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 555
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 556 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 590
Score = 126 (49.4 bits), Expect = 0.00047, P = 0.00047
Identities = 70/294 (23%), Positives = 124/294 (42%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 477 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 528
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 529 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 581
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 582 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 635
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 636 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVI 691
Query: 615 AAGDEFMIKFWDM---DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
+ D+ +K WD+ + + L ++++ G IR + ++ AV + NG
Sbjct: 692 TSSDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NG 744
Score = 84 (34.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W
Sbjct: 607 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 659
Score = 78 (32.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 644 DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNK--NFVITSSDDGTVKL 701
Query: 954 W 954
W
Sbjct: 702 W 702
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 142 (55.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 74/310 (23%), Positives = 120/310 (38%)
Query: 379 GDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYS 438
G V L + G + V +V L S + SL + + SPD + A
Sbjct: 28 GKVQLDQTG-QHLFCVCGTRVNILDVASGAVLRSLEQEDQEDITAFDLSPDDKVLVTASR 86
Query: 439 KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGT 498
++ + + G R I H V +AF P L + T G D ++VWD V
Sbjct: 87 ALLLAQWAWQEGSVTRLWKAI--HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDVVRCY 142
Query: 499 KQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA 558
+ F G V+ + H +FS+A D I+ W A + T +
Sbjct: 143 GTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLT 202
Query: 559 YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT------TKN- 611
+SADG + S G +K V W+ RT V+ + K+
Sbjct: 203 FSADGHTMLSSGRDK----ICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSA 258
Query: 612 --RFLAAGDEFMIKFWDMDNVNLL-ASIDADG-GLQASPCIRFNKEGILLAVSTNDNGIK 667
FL AGD+ ++ W+ + + A G G + + C + G+LL+V+ + N
Sbjct: 259 GLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHN--L 316
Query: 668 ILANADGIRL 677
+L +A +RL
Sbjct: 317 LLYDARSLRL 326
Score = 69 (29.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A D +I+++ ++ +GH + +AF + L+SSG+D L +
Sbjct: 531 PMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKL 589
Query: 954 WS 955
W+
Sbjct: 590 WT 591
Score = 45 (20.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V ++ + + G +L+ S+ + KLW NE
Sbjct: 566 VLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE 596
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/273 (21%), Positives = 116/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 100
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 101 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 157 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 210
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 268
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/281 (21%), Positives = 114/281 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 65 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 122 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 177 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 232
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV-VQFDTTKNRFLAAGDEF-MIKFWDM 627
++ L W+ S+G +TY G + F T +++ +G E ++ W++
Sbjct: 233 TL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ + + S + I A ND IK+
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/273 (21%), Positives = 116/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 100
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 101 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 157 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 210
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 268
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/281 (21%), Positives = 114/281 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 65 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 122 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 177 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 232
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV-VQFDTTKNRFLAAGDEF-MIKFWDM 627
++ L W+ S+G +TY G + F T +++ +G E ++ W++
Sbjct: 233 TL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ + + S + I A ND IK+
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/273 (21%), Positives = 116/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 100
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 101 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 157 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 210
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 268
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/281 (21%), Positives = 114/281 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 65 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 122 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 177 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 232
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV-VQFDTTKNRFLAAGDEF-MIKFWDM 627
++ L W+ S+G +TY G + F T +++ +G E ++ W++
Sbjct: 233 TL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ + + S + I A ND IK+
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/273 (21%), Positives = 116/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 100
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 101 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 157 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 210
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 268
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/281 (21%), Positives = 114/281 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 65 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 122 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 177 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 232
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV-VQFDTTKNRFLAAGDEF-MIKFWDM 627
++ L W+ S+G +TY G + F T +++ +G E ++ W++
Sbjct: 233 TL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ + + S + I A ND IK+
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/273 (21%), Positives = 116/273 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 100
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 101 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 157 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 210
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCI--RFNK 652
V V+F LAA + +K WD L + G CI F+
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNEKYCIFANFSV 268
Query: 653 EGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
G VS +++ + + N +++ ++ T
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/281 (21%), Positives = 114/281 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 65 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 122 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 177 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 232
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV-VQFDTTKNRFLAAGDEF-MIKFWDM 627
++ L W+ S+G +TY G + F T +++ +G E ++ W++
Sbjct: 233 TL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ + + S + I A ND IK+
Sbjct: 289 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 130 (50.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 50/204 (24%), Positives = 84/204 (41%)
Query: 387 GSRERIAVKSFKVWELGACSMPLQASL-SSDYTASVNRVMWSPDGTLFGVAYSKHIVHLY 445
G ERI++ W+L L SL D A V V S DG L YS + ++
Sbjct: 34 GCGERISI-----WDLR--KQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIW 86
Query: 446 TYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCG-EDRVIKVWDAVTGTKQYIFE 504
+ + + H GSV + F N+ +++ G +D + VWD +T + +
Sbjct: 87 SM---SDYQLQAVFNGHRGSVTTMTF---NRLGNILVSGSKDTEVIVWDIITESGLFRLR 140
Query: 505 GHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSA--D 562
GH + S+ + N + +++ DG IK W D GH + + D
Sbjct: 141 GHRDQITSVKLLERSN--HLITSSKDGFIKIW--DTETQHCIQTIVGHRNPIWGIDVNPD 196
Query: 563 GARLFSCGTNKEGESYLVEWNESE 586
RL SC ++ + + + NE +
Sbjct: 197 ETRLCSCTSDNQIRFWRIPSNERQ 220
Score = 82 (33.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 26/121 (21%), Positives = 56/121 (46%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
DN +A+ + D++++I+ + L GH+ + L S+ ++++ AD + +W
Sbjct: 542 DNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWG 601
Query: 956 TDGWEKQASKFLTIPNGRTASALADTRVQFHLDQTH--LLAVHETQIAIYEAPKLECLKQ 1013
D + S F S + +V F + TH + A + +I ++A K E ++
Sbjct: 602 LDYGDCHKSFF-----AHDDSIM---QVSF-IPSTHHFISASKDKRIKYWDADKFEHIQT 652
Query: 1014 V 1014
+
Sbjct: 653 I 653
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 68/225 (30%), Positives = 102/225 (45%)
Query: 421 VNRVMWSPDGTLFGVAYS-KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLS 479
V V+ S DG F ++ S + L+ G R + H V +AFS N+Q
Sbjct: 66 VEDVVLSSDGQ-FALSGSWDGELRLWDLAAGVSTRRFV---GHTKDVLSVAFSLDNRQ-- 119
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPV-YSICPHHKEN-IQ-FIFSTATDGKIKAW 536
+V+ DR IK+W+ + K I EG E + C N +Q I S + D +K W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Query: 537 LYDNLGSRVDYDA-PGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHG 595
N R G+ ST+ A S DG+ S G K+G L W+ +EG K+ Y
Sbjct: 180 NLSNCKLRSTLAGHTGYVSTV-AVSPDGSLCASGG--KDGVVLL--WDLAEG--KKLY-S 231
Query: 596 LGKRSVGVVQFDTTKNRF-LAAGDEFMIKFWDMDNVNLLASIDAD 639
L SV + + NR+ L A E IK WD+++ +++ + D
Sbjct: 232 LEANSV-IHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVD 275
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 70/285 (24%), Positives = 125/285 (43%)
Query: 357 SAVKSMDFHPVQQILLVVGTNMGDVMLWEV----------GSRERIAVKSF----KVWEL 402
S+V+S+ F P Q LL G++ + LW G +R+ +F ++W
Sbjct: 84 SSVQSVAFSPNGQ-LLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNP 142
Query: 403 GACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
S+ SD+ SV +SPDG L ++ + L+ L++ L H
Sbjct: 143 AIGSLKHTIEGHSDWVLSV---AFSPDGQLLASGSAEKTIKLWD-SATCGLKHTLG--GH 196
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
V L FS P+ +L + + D IK+WD +G+ ++ EGH + + S+ N Q
Sbjct: 197 SNWVLPLVFS-PDGRL-LASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLA--FSPNGQ 252
Query: 523 FIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLV 580
+ S ++D IK W D + GHS +++ +S D ++L G+ G++ +
Sbjct: 253 LLASGSSDATIKLW--DTATGSFRHTLKGHSDMVLSVVFSPD-SQLLESGS---GDNTIK 306
Query: 581 EWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFW 625
W+ + G +K + G V ++F + + F I+ W
Sbjct: 307 LWDPATGILKHSMRTPG--IVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 146 (56.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 59/228 (25%), Positives = 103/228 (45%)
Query: 451 DELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPV 510
D L++ +E H V +AFS PN QL W+ G+ ++ EGH V
Sbjct: 115 DSLKHTME--GHSDRVESVAFS-PNGQL-------------WNPAIGSLKHTIEGHSDWV 158
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMM--AYSADGARLFS 568
S+ + Q + S + + IK W D+ + + GHS+ ++ +S DG RL +
Sbjct: 159 LSVA--FSPDGQLLASGSAEKTIKLW--DSATCGLKHTLGGHSNWVLPLVFSPDG-RLLA 213
Query: 569 CGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDM 627
G+N ++ + W+ G++K T G + + + F + + LA+G + IK WD
Sbjct: 214 SGSN---DATIKLWDPPSGSLKHTLEGHSNK-IESLAF-SPNGQLLASGSSDATIKLWDT 268
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGI 675
+ ++ + S + F+ + LL + DN IK+ A GI
Sbjct: 269 ATGSFRHTLKGHSDMVLS--VVFSPDSQLLESGSGDNTIKLWDPATGI 314
Score = 136 (52.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 70/281 (24%), Positives = 130/281 (46%)
Query: 359 VKSMDFHPVQQILLVVGTNMGDVMLWEVGS---RERIAVKSFKVWELG-ACSMPLQASLS 414
++++ F P + LL G+N + LW+ S ++ + S V + + + L AS S
Sbjct: 44 IETVTFSPDGR-LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGS 102
Query: 415 SDYTASV-NRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN----HLE--IEAHVGSVN 467
SD T + N S T+ G +S + + + +L N L+ IE H V
Sbjct: 103 SDTTIKLWNSASDSLKHTMEG--HSDRVESV-AFSPNGQLWNPAIGSLKHTIEGHSDWVL 159
Query: 468 DLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFST 527
+AFS P+ QL + + ++ IK+WD+ T ++ GH + V + + + + S
Sbjct: 160 SVAFS-PDGQL-LASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLV--FSPDGRLLASG 215
Query: 528 ATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNES 585
+ D IK W D + + GHS+ + +A+S +G +L + G++ ++ + W+ +
Sbjct: 216 SNDATIKLW--DPPSGSLKHTLEGHSNKIESLAFSPNG-QLLASGSS---DATIKLWDTA 269
Query: 586 EGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
G+ + T G + VV ++ +GD IK WD
Sbjct: 270 TGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDN-TIKLWD 309
Score = 114 (45.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 450 GDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESP 509
G EL+ +E H + + FS P+ +L + + D IK+WD +G + EGH S
Sbjct: 31 GPELQT---LEGHSDWIETVTFS-PDGRL-LASGSNDTTIKLWDPASGGLKQTLEGHSSS 85
Query: 510 VYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADG 563
V S+ N Q + S ++D IK W ++ + + GHS + +A+S +G
Sbjct: 86 VQSVA--FSPNGQLLASGSSDTTIKLW--NSASDSLKHTMEGHSDRVESVAFSPNG 137
Score = 79 (32.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+ ++A G D++I++++ + LKGH + + FS +L S D+ + +W
Sbjct: 250 NGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 823 QLWQPPSGIL 832
+LW P +GIL
Sbjct: 306 KLWDPATGIL 315
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 127 (49.8 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 371
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 372 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 424
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 425 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 459
Score = 123 (48.4 bits), Expect = 0.00070, P = 0.00070
Identities = 62/253 (24%), Positives = 106/253 (41%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 346 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 397
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 398 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 450
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 451 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 504
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 505 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI 560
Query: 615 AAGDEFMIKFWDM 627
+ D+ +K WD+
Sbjct: 561 TSSDDGTVKLWDL 573
Score = 84 (34.6 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W
Sbjct: 476 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 528
Score = 78 (32.5 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 513 DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKL 570
Query: 954 W 954
W
Sbjct: 571 W 571
Score = 38 (18.4 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 415 SDYTASVNRVMWSPDGTLFG 434
SDYT++ V S T FG
Sbjct: 113 SDYTSTTGLVPCSATPTTFG 132
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 141 (54.7 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 48/159 (30%), Positives = 68/159 (42%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
S K+W L + P+ A + ++ V RV W P G G H L+ +E+
Sbjct: 289 SVKLWSLDS-DEPI-ADIEG-HSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI-- 343
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L E H V+DL F +P+ L+ T G D +VWD TG EGH +YSI
Sbjct: 344 -LHQEGHSKGVHDLHF-HPDGSLAG-TGGLDSFARVWDLRTGRCVMFLEGHIKEIYSI-- 398
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
+ N + + + D K W D R Y P H +
Sbjct: 399 NFSPNGFHVATGSGDNACKVW--DLRQRRCIYTIPAHQN 435
Score = 55 (24.4 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 894 PQDNNIIAIGMEDSSIQIY-NVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P D + + G D++ +I+ + +KT L GH+ ++ G+ S ++ + D
Sbjct: 444 PNDGHYLLTGAYDNTAKIWTHPGWSPLKT-LAGHEGKVMGVDLSPDGQLIATCSYDRTFK 502
Query: 953 VWSTD 957
+W ++
Sbjct: 503 LWMSE 507
Score = 49 (22.3 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 348 TVVMTLN-QGSAVKSMDFHPVQQILLVVG-TNM------GDVMLWEVGSRERIA 393
T++ TL + V ++ FHP + L NM G V LW + S E IA
Sbjct: 249 TLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIA 302
Score = 39 (18.8 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 77 RKQKYLEALDKRDRAKAVEILVKDLKV 103
R+ + L ++R RA+ + + D++V
Sbjct: 67 RQAEVLAEFERRKRARQITVSTDDVEV 93
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 132 (51.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/232 (21%), Positives = 100/232 (43%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 607 SRLVVRPHTDAVYHACFSQDGQRIA--SCGADKTLQVFKAETGEKLLDIKAHEDEV--LC 662
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAY---SADGARLFSCGT 571
+ +I + + D K+K W D+ ++ + HS + + L + G+
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIW--DSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGS 720
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
N +S+L W+ ++ + T G SV +F + + +K WD+ + N
Sbjct: 721 N---DSFLKLWDLNQKECRNTMFG-HTNSVTHCRFSPDDELLASCSADGTLKLWDVRSAN 776
Query: 632 LLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVES 683
SI+ +S + E I+ S + +G +I+ A LL + +
Sbjct: 777 EKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHT 828
Score = 130 (50.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + + ++ G++L L+I+AH V AFS +
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLCCAFSSDDS 670
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH--HKENIQFIFSTATDGKIK 534
++ TC D+ +K+WD+ TG + +E H V C H +K N + + + D +K
Sbjct: 671 YIA--TCSVDKKVKIWDSGTGKLVHTYEEHSEQVN--CCHFTNKSNHLLLATGSNDSFLK 726
Query: 535 AWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
W + R +S T +S D L SC +
Sbjct: 727 LWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSAD 764
Score = 81 (33.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+A G E+ +I+I + + V + GH+K + + F+ L+SS DS + VW+ W
Sbjct: 976 VAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWN---W 1032
Query: 960 EKQASKFL 967
+ + FL
Sbjct: 1033 QTEEYVFL 1040
Score = 67 (28.6 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 23/123 (18%), Positives = 48/123 (39%)
Query: 838 SDTNPEDA---VPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHP 894
S+ PED V C + S + ++ A+ K+ L +
Sbjct: 790 SEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFS 849
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTK-LKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
+++ I + ++++N+ VK +GH + G+ FS + +++ D + V
Sbjct: 850 PYDHLAVIALSQYCVELWNID-SRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRV 908
Query: 954 WST 956
W T
Sbjct: 909 WET 911
Score = 63 (27.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D+ +++ D +++++NV ++ HQ + A S+ S+ AD +W
Sbjct: 1054 RDSRLLSWSF-DGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Query: 955 S 955
S
Sbjct: 1113 S 1113
Score = 60 (26.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QLCVWS-TDGWEKQA 963
D + +I++ + +LKGH + AFS +L+++G D+ ++ +W+ +DG
Sbjct: 1106 DKTAKIWSFELPSPLHELKGHNSCVRCSAFSLD-GILLATGDDNGEIRIWNVSDGQLLHL 1164
Query: 964 SKFLTIPNGRTASALADTRVQFHLDQTHLLA 994
++I G T V F D+ L++
Sbjct: 1165 CAPISIEEGTATHGGWVTDVCFSPDRKMLVS 1195
Score = 59 (25.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 31/124 (25%), Positives = 44/124 (35%)
Query: 839 DTNPEDAVPCFALSKNDSYV-MSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 897
D PE V C LS + YV G I +
Sbjct: 957 DYLPEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGK 1016
Query: 898 NIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
+I+ EDS IQ++N + +E L+ HQ+ + +L DS+L WS D
Sbjct: 1017 TLIS-SSEDSVIQVWNWQTEEY-VFLQAHQETV------KDFRLL----RDSRLLSWSFD 1064
Query: 958 GWEK 961
G K
Sbjct: 1065 GTVK 1068
Score = 46 (21.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V + +T G +++ + ++V ++W W E
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQTEE 1036
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 958 GWEKQASKFLTIPNGRTASA-----LADTRVQFHLDQTHLLAVHETQI 1000
G E+ A K + +PN R S+ A +QF D L++ E +
Sbjct: 979 GDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSV 1026
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/187 (24%), Positives = 82/187 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ +VW L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNAHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H ++I + S + D IK + L S D A H+ST+ + + A+G RL
Sbjct: 152 KRVVWHPTKDI--LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRL 209
Query: 567 FSCGTNK 573
SC +K
Sbjct: 210 VSCSDDK 216
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/187 (24%), Positives = 82/187 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ +VW L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNAHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H ++I + S + D IK + L S D A H+ST+ + + A+G RL
Sbjct: 152 KRVVWHPTKDI--LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAEGDRL 209
Query: 567 FSCGTNK 573
SC +K
Sbjct: 210 VSCSDDK 216
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 112 (44.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 39/152 (25%), Positives = 78/152 (51%)
Query: 7 ELVFLILQFLDEEKFKETVHKLEQDSG-----FFFNMRYFEDMVTNGEWDEVEKYLSGFT 61
E++ LIL FL+ +K ++ LE++SG F +M + ++ +G+WDEV +++
Sbjct: 13 EIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLE 72
Query: 62 KVDDNRYSMKIF-FEIRKQKYLEAL------DKRDRAKAVEILVKD-LKVFSAFNE---- 109
++ ++ K F + I KQK+LEAL D + +E +++ ++ A E
Sbjct: 73 CME--KFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPS 130
Query: 110 -DLFKEITQLLTLENFRDNEQLSKYGDTKSAR 140
D + ++ LLTL ++ + + + +AR
Sbjct: 131 KDDYSKLCLLLTLPRLTNHAEFKDWNPS-TAR 161
Score = 98 (39.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 72/317 (22%), Positives = 124/317 (39%)
Query: 327 PVAYTPQSLGQSSYSTDDLPKTVVMTLN---QGSAVKSMDFHPVQQILLVVGTNMGDVML 383
P+ +P SL +S DD K + +N AV+++ FHP L VG+N +
Sbjct: 574 PLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQAVRAVAFHPAGG-LYAVGSNSKTL-- 630
Query: 384 WEVGSRERIAVKSFKVWELGACSMPLQASL----SSDYTASVNRVMWSPDGTLFGVAYSK 439
R+ V + A P Q + + + S+ V WSP G L +
Sbjct: 631 -------RVCAYP-DVIDPSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSND 682
Query: 440 HIVHLYTYHGG--DELRNHLEIEAHVGSVNDLAFSY-PNKQLSV-VTCGE-DRVIKVWDA 494
V + ++ + LE H G++ DLAF P ++ ++ G D I D
Sbjct: 683 KYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDC 742
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYDNLGSRV---DYDAP 550
G + GH + ++ + + I S + D ++ W L RV +
Sbjct: 743 QRGQGLHALSGHTGHILAL---YTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGT 799
Query: 551 GHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTK 610
G + +A G RL + G +E S ++ ++ G + ++YH V V+F
Sbjct: 800 GSAVASVAVDPSG-RLLATG--QEDSSCML-YDIRGGRMVQSYHPHSS-DVRSVRFSPGA 854
Query: 611 NRFLAAGDEFMIKFWDM 627
+ L + IK D+
Sbjct: 855 HYLLTGSYDMKIKVTDL 871
Score = 68 (29.0 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDG 958
++A G EDSS +Y++R + H + + FS + L++ D ++ V G
Sbjct: 814 LLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQG 873
Score = 54 (24.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 647 CIRFNKEGILLAVSTNDNGIKILA-NADGIRLLRT-VESRTFDASRVASAAIVKAPAIG- 703
C+ ++ G LLA +ND +K+L NA+ +E D + + A ++ P G
Sbjct: 666 CVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGT-IRDLAFMEGPESGG 724
Query: 704 ----TFGSANANVGTSLGERTAPAAAMVGMSNDSRN-FTDVKPKIADEAVEKS-RIWKL 756
+ G+ + N+ T+ +R A+ G + +T IA + +K+ R W L
Sbjct: 725 AILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDL 783
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 146 (56.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 53/234 (22%), Positives = 107/234 (45%)
Query: 451 DELRNHL--EIEAHVGSVNDLAFSYPNKQLSVVTCGE-DRVIKVWDAVTGTKQYIFEGHE 507
DE + +L ++AH+ + ++AF NK S G DR K+WD +G + + EGH
Sbjct: 78 DERKFYLFRALQAHILPLTNVAF---NKSGSCFITGSYDRTCKIWDTASGEELHTLEGHR 134
Query: 508 SPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLF 567
+ VY+I ++ + + + + D K W + + Y GH++ ++ + +
Sbjct: 135 NVVYAIAFNNPYGDK-VATGSFDKTCKLWSAET--GKCFYTFRGHTAEIVCLAFNPQSTL 191
Query: 568 SCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDM 627
+ + + L W+ G T G + + F+TT +R + + WD+
Sbjct: 192 VATGSMDTTAKL--WDVESGEEVSTLAGHFAEIISLC-FNTTGDRLVTGSFDHTAILWDV 248
Query: 628 DNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTV 681
+ + + G + S C++FN + L+A ++ D K+ +A+G + L T+
Sbjct: 249 PSGRKVHVLSGHRG-EIS-CVQFNWDCSLIATASLDKSCKVW-DAEGGQCLATL 299
Score = 131 (51.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 69/353 (19%), Positives = 131/353 (37%)
Query: 321 LSVNILPVAYTPQSLGQSSYSTDDLPKTV-VMTLNQGSAVKSMDFHPVQQILLVVGTN-- 377
L +ILP+ + S + T +T + G + +++ H + ++ + N
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGH--RNVVYAIAFNNP 145
Query: 378 MGDVMLWEVGSRERIAVKSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
GD + GS + K+ K+W E G C + +TA + + ++P TL
Sbjct: 146 YGDKVA--TGSFD----KTCKLWSAETGKCFYTFRG-----HTAEIVCLAFNPQSTLVAT 194
Query: 436 AYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAV 495
L+ G+E+ + H + L F+ +L VT D +WD
Sbjct: 195 GSMDTTAKLWDVESGEEVST---LAGHFAEIISLCFNTTGDRL--VTGSFDHTAILWDVP 249
Query: 496 TGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSST 555
+G K ++ GH + C + I + + D K W D G + GH+
Sbjct: 250 SGRKVHVLSGHRGEIS--CVQFNWDCSLIATASLDKSCKVW--DAEGGQCLATLLGHNDE 305
Query: 556 MMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLA 615
++ + + +G S + + + + H K + V F+ +R L
Sbjct: 306 VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGH---KGEISKVCFNAQGSRVLT 362
Query: 616 AGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
A + + W + L ++ + C FN EG + + DN +I
Sbjct: 363 ASVDKTSRVWCVKTGACLQVLEGHSD-EIFSCA-FNYEGDTIITGSKDNTCRI 413
Score = 53 (23.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/56 (19%), Positives = 29/56 (51%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+IA D + ++++ + +L+GH+ I+ + F+ + ++++ D VW
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 53 (23.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 11/60 (18%), Positives = 29/60 (48%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
Q + ++ ++ +S +++ V+ L+GH I AF+ + +++ D+ +W
Sbjct: 356 QGSRVLTASVDKTS-RVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/260 (24%), Positives = 115/260 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYS-KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPN 475
++ ++N V S DG LF ++ S H V L+ G+ +R+ + H V ++FS N
Sbjct: 71 HSQAINDVSISSDG-LFALSGSWDHSVRLWDLSLGETIRSFI---GHTSDVFSVSFSPDN 126
Query: 476 KQLSVVTCGEDRVIKVWDAVTGTKQYIFEG-HESPVYSICPHHKENIQFIFSTATDGKIK 534
+Q +V+ D+ IK+W+ + K I + H + + N I S D +K
Sbjct: 127 RQ--IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 535 AWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT 592
W N ++ + GH+ + + S DG+ S G K+G + L W+ EG K
Sbjct: 185 VWNLKNCD--LNKNLEGHTGVLNTVTISPDGSLCASGG--KDGVAKL--WDVKEG--KHL 236
Query: 593 YHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI----DADGGLQASPCI 648
Y ++ + F AA D F I+ W++++ +++ I + G+ +
Sbjct: 237 YSLETGSTINSLCFSPCDYWLCAATDRF-IRIWNLESKLIISEIYPVKQSKIGVPWCTSL 295
Query: 649 RFNKEGILLAVSTNDNGIKI 668
++ G LL + D I +
Sbjct: 296 TWSANGQLLYCGSTDGNIYV 315
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/260 (24%), Positives = 115/260 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYS-KHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPN 475
++ ++N V S DG LF ++ S H V L+ G+ +R+ + H V ++FS N
Sbjct: 71 HSQAINDVSISSDG-LFALSGSWDHSVRLWDLSLGETIRSFI---GHTSDVFSVSFSPDN 126
Query: 476 KQLSVVTCGEDRVIKVWDAVTGTKQYIFEG-HESPVYSICPHHKENIQFIFSTATDGKIK 534
+Q +V+ D+ IK+W+ + K I + H + + N I S D +K
Sbjct: 127 RQ--IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 535 AWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT 592
W N ++ + GH+ + + S DG+ S G K+G + L W+ EG K
Sbjct: 185 VWNLKNCD--LNKNLEGHTGVLNTVTISPDGSLCASGG--KDGVAKL--WDVKEG--KHL 236
Query: 593 YHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI----DADGGLQASPCI 648
Y ++ + F AA D F I+ W++++ +++ I + G+ +
Sbjct: 237 YSLETGSTINSLCFSPCDYWLCAATDRF-IRIWNLESKLIISEIYPVKQSKIGVPWCTSL 295
Query: 649 RFNKEGILLAVSTNDNGIKI 668
++ G LL + D I +
Sbjct: 296 TWSANGQLLYCGSTDGNIYV 315
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 68/253 (26%), Positives = 111/253 (43%)
Query: 395 KSFKVWELGA--CSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYS-KHIVHLYTYHGGD 451
KS +W+L S + + ++ V V+ S DG F ++ S + L+ G+
Sbjct: 38 KSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQ-FALSGSWDGELRLWDLATGE 96
Query: 452 ELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVY 511
R + H V +AFS N+Q +V+ DR IK+W+ + K I E +
Sbjct: 97 STRRFV---GHTKDVLSVAFSTDNRQ--IVSASRDRTIKLWNTLGECKYTISEADGHKEW 151
Query: 512 SICPHHKEN--IQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLF 567
C N + I S + D +K W N R GHS + +A S DG+
Sbjct: 152 VSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR--NTLAGHSGYLNTVAVSPDGSLCA 209
Query: 568 SCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRF-LAAGDEFMIKFWD 626
S G K+G L W+ +EG K+ Y L S+ + + NR+ L A E I+ WD
Sbjct: 210 SGG--KDGVILL--WDLAEG--KKLY-SLEAGSI-IHSLCFSPNRYWLCAATENSIRIWD 261
Query: 627 MDNVNLLASIDAD 639
+++ +++ + D
Sbjct: 262 LESKSVVEDLKVD 274
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 128 (50.1 bits), Expect = 0.00022, P = 0.00022
Identities = 70/294 (23%), Positives = 123/294 (41%)
Query: 383 LWEVGSRERIAV-----KSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
+W R+ I + ++ KVW E G C L +T++V R M + + V
Sbjct: 346 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-----HTSTV-RCMHLHEKRV--V 397
Query: 436 AYSKHI-VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDA 494
+ S+ + ++ G L H+ + HV +V Y ++ VV+ D ++KVWD
Sbjct: 398 SGSRDATLRVWDIETGQCL--HV-LMGHVAAVR--CVQYDGRR--VVSGAYDFMVKVWDP 450
Query: 495 VTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
T T + +GH + VYS+ + I + S + D I+ W + G+ + + GH S
Sbjct: 451 ETETCLHTLQGHTNRVYSL---QFDGIHVV-SGSLDTSIRVWDVET-GNCI-HTLTGHQS 504
Query: 555 TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFL 614
L S G +S + W+ G +T G K V KN +
Sbjct: 505 LTSGMELKDNILVS-GN---ADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI 560
Query: 615 AAGDEFMIKFWDMDN---VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
+ D+ +K WD+ + L ++++ G IR + ++ AV + NG
Sbjct: 561 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR-NG 613
Score = 127 (49.8 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ +D +KVW AVTG GH V+S ++NI I S +TD +K W +
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--SQMRDNI--IISGSTDRTLKVWNAE 371
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
G + + GH+ST+ R+ S G+ ++ L W+ G G
Sbjct: 372 T-GECI-HTLYGHTSTVRCMHLHEKRVVS-GSR---DATLRVWDIETGQCLHVLMG-HVA 424
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V VQ+D R ++ +FM+K WD + L ++
Sbjct: 425 AVRCVQYDG--RRVVSGAYDFMVKVWDPETETCLHTL 459
Score = 84 (34.6 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+ G D+SI++++V L GHQ +G+ + N+LVS ADS + +W
Sbjct: 476 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 528
Score = 78 (32.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKG---HQKRITGLAFSNTLNVLVSSGADSQLCV 953
+NI+ G DS+++I++++ + L+G HQ +T L F+ N +++S D + +
Sbjct: 513 DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKL 570
Query: 954 W 954
W
Sbjct: 571 W 571
Score = 38 (18.4 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 415 SDYTASVNRVMWSPDGTLFG 434
SDYT++ V S T FG
Sbjct: 113 SDYTSTTGLVPCSATPTTFG 132
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 152 (58.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 67/292 (22%), Positives = 113/292 (38%)
Query: 389 RERIAVKSFKVWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTY 447
RE I VW L S+P + S + +R + D L + + ++
Sbjct: 100 REHIIDCGDIVWSLAFGSSVPEKQSRCVNI--EWHRFRFGQDQLLLATGLNNGRIKIWDV 157
Query: 448 HGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGH 506
+ G L N ++ H V DL F+ P+ L +V+ D+ ++VWD G + GH
Sbjct: 158 YTGKLLLNLVD---HTEVVRDLTFA-PDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGH 213
Query: 507 ESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL 566
++ VYS C ++ + S + W D + H +S DGA L
Sbjct: 214 QNWVYS-CAFSPDS-SMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFL 614
+ + + Y+ W+ GA+ + H G R V V F
Sbjct: 272 ATA--SYDTRVYI--WDPHTGAILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 615 AAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
+ D+ M++FW +D + GL C F+ +G +LA T+D +
Sbjct: 328 SLADDKMVRFWRIDEDYPVQVAPLSNGL----CCAFSTDGSVLAAGTHDGSV 375
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 66/258 (25%), Positives = 111/258 (43%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H V + FS P+ L + + DR +++W K F+ H +PV S+ +
Sbjct: 17 HKDVVTSVQFS-PHGNL-LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV--DFSADG 72
Query: 522 QFIFSTATDGKIKAW-LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESY 578
QF+ + + D IK W +Y R Y H+ + +S DG + SC +K
Sbjct: 73 QFLATASEDKSIKVWSMYRQ---RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT---- 125
Query: 579 LVEWNESEGAVKRTYHGLGKRSVGV---VQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
+ W+ + K+ + SVG V F+ + +AG + +K WD+ LL
Sbjct: 126 IKIWDTTN---KQCVNNFSD-SVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQH 181
Query: 636 IDA-DGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASA 694
GG+ CI F+ G L +++D +KIL +G RL+ T++ T V +
Sbjct: 182 YQVHSGGVN---CISFHPSGNYLITASSDGTLKILDLLEG-RLIYTLQGHT---GPVFTV 234
Query: 695 AIVKAPAIGTFGSANANV 712
+ K + G A+ V
Sbjct: 235 SFSKGGELFASGGADTQV 252
Score = 103 (41.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 41/182 (22%), Positives = 77/182 (42%)
Query: 491 VWDAVTGTKQYIFEGHESPVYSI--CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYD 548
+W+ + Y + GH+ V S+ PH N+ + S + D ++ W+ D G ++
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHG--NL--LASASRDRTVRLWIPDKRGKFSEFK 57
Query: 549 APGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRS--VGVVQF 606
A + +SADG L T E +S V W+ +R + L + + V +F
Sbjct: 58 AHTAPVRSVDFSADGQFL---ATASEDKSIKV-WSMYR---QRFLYSLYRHTHWVRCAKF 110
Query: 607 DTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
++ ++ IK WD N + + G + + FN G +A + +D +
Sbjct: 111 SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF--ANFVDFNPSGTCIASAGSDQTV 168
Query: 667 KI 668
K+
Sbjct: 169 KV 170
Score = 86 (35.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I D +++I ++ + L+GH + ++FS + S GAD+Q+
Sbjct: 195 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 953 VWSTDGWEKQASKFLTIPNGRTASALADTRVQFHLDQT-HLLAV-------HETQIAIYE 1004
+W T+ +++ K LT N + + H D HLL + HE ++ E
Sbjct: 254 LWRTN-FDELHCKGLTKRNLK----------RLHFDSPPHLLDIYPRTPHPHEEKVETVE 302
Query: 1005 A-PKLECL 1011
PKLE +
Sbjct: 303 INPKLEVI 310
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 130 (50.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 50/227 (22%), Positives = 97/227 (42%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 607 SRLVVRPHTDAVYHACFSQDGQRIA--SCGADKTLQVFKAETGEKLLDIKAHEDEV--LC 662
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAY---SADGARLFSCGT 571
+ +I + + D K+K W D+ ++ + HS + + L + G+
Sbjct: 663 CAFSSDDSYIATCSADKKVKIW--DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS 720
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
N + +L W+ ++ + T G SV +F + + ++ WD+ + N
Sbjct: 721 N---DFFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776
Query: 632 LLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLL 678
SI+ +S + E I+ S + +G KI+ A LL
Sbjct: 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLL 823
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 39/158 (24%), Positives = 69/158 (43%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + + ++ G++L L+I+AH V AFS +
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLCCAFSSDDS 670
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH--HKENIQFIFSTATDGKIK 534
++ TC D+ +K+WD+ TG + ++ H V C H +K N + + + D +K
Sbjct: 671 YIA--TCSADKKVKIWDSATGKLVHTYDEHSEQVN--CCHFTNKSNHLLLATGSNDFFLK 726
Query: 535 AWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
W + R +S +S D L SC +
Sbjct: 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764
Score = 81 (33.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
+A G ED +I+I + + V + GH+K + + F+ L+SS DS + VW+ W
Sbjct: 976 VAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN---W 1032
Query: 960 EKQASKFL 967
+ FL
Sbjct: 1033 QTGDYVFL 1040
Score = 71 (30.1 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
QD+ +++ D +++++NV ++ HQ + A S+ S+ AD +W
Sbjct: 1054 QDSRLLSWSF-DGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Query: 955 STD 957
S D
Sbjct: 1113 SFD 1115
Score = 71 (30.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 22/122 (18%), Positives = 47/122 (38%)
Query: 838 SDTNPEDA---VPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHP 894
S+ PED V C + S + ++ A+ K+ LF+
Sbjct: 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS 849
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+++ I + ++++N+ +GH + G+ FS + +++ D + VW
Sbjct: 850 PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVW 909
Query: 955 ST 956
T
Sbjct: 910 ET 911
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/124 (24%), Positives = 43/124 (34%)
Query: 839 DTNPEDAVPCFALSKNDSYV-MSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 897
D PE V C LS + YV G I +
Sbjct: 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK 1016
Query: 898 NIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
+I+ EDS IQ++N + + L+ HQ+ + +L DS+L WS D
Sbjct: 1017 TLIS-SSEDSVIQVWNWQTGDY-VFLQAHQETV------KDFRLL----QDSRLLSWSFD 1064
Query: 958 GWEK 961
G K
Sbjct: 1065 GTVK 1068
Score = 53 (23.7 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 21/91 (23%), Positives = 44/91 (48%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QLCVWS-TDGWEKQA 963
D + +I++ + +LKGH + AFS +L+++G D+ ++ +W+ +DG +
Sbjct: 1106 DKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLD-GILLATGDDNGEIRIWNVSDGQLLHS 1164
Query: 964 SKFLTIPNGRTASALADTRVQFHLDQTHLLA 994
+++ G T V F D L++
Sbjct: 1165 CAPISVEEGTATHGGWVTDVCFSPDSKTLVS 1195
Score = 43 (20.2 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKW 805
V + +T G +++ + ++V ++W W
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWNW 1032
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 958 GWEKQASKFLTIPNGRTASA-----LADTRVQFHLDQTHLLAVHETQI 1000
G E A K + +PN R S+ A +QF D L++ E +
Sbjct: 979 GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSV 1026
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/271 (20%), Positives = 114/271 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V+ V +SP+G + + ++ ++ + G + I H ++D+A+S +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSN 100
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
L V+ +D+ +K+WD +G +GH + Y C + I S + D ++ W
Sbjct: 101 LL--VSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
D + P HS + A ++ DG+ + S ++ +G + W+ + G +T
Sbjct: 157 --DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLI 210
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEG 654
V V+F LAA + +K WD L + + F+ G
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTG 270
Query: 655 ILLAVSTNDNGIKILANADGIRLLRTVESRT 685
VS +++ + + N +++ ++ T
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEVVQKLQGHT 301
Score = 148 (57.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 62/282 (21%), Positives = 115/282 (40%)
Query: 393 AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDE 452
A K K+W GA + ++S + ++ V WS D L A + ++ G
Sbjct: 65 ADKLIKIW--GAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ ++ H V F+ P L +V+ D +++WD TG H PV +
Sbjct: 122 LKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDN---LGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ H + I S++ DG + W + L + +D D P S + +S +G + +
Sbjct: 177 V--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS--FVKFSPNGKYILAA 232
Query: 570 GTNKEGESYLVEWNESEGAVKRTY--HGLGKRSVGVVQFDTTKNRFLAAGDEF-MIKFWD 626
++ L W+ S+G +TY H K + F T +++ +G E ++ W+
Sbjct: 233 TL----DNTLKLWDYSKGKCLKTYTCHKNEKYCI-FANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 627 MDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ ++ + + S + I A ND IK+
Sbjct: 288 LQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 123 (48.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 58/208 (27%), Positives = 87/208 (41%)
Query: 427 SPDGTL-FGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGE 485
SPD L F +S+ I ++ + L+ + H G V +A L+ T G
Sbjct: 69 SPDDKLLFSAGHSRQI-RVWDL---ETLKCIRSWKGHEGPVMGMACHASGGLLA--TAGA 122
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD--NLGS 543
DR + VWD G + F GH+ V SI H N + S + D ++ W + N
Sbjct: 123 DRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEK 182
Query: 544 RVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ H S T +A S DG LFS G +K + + + S A TY L +V
Sbjct: 183 KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLH-DYSCKATVATYEVL--EAV 239
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDN 629
V T F+A+ D+ K + D+
Sbjct: 240 TTVSSGTPFASFVASLDQKKSKKKESDS 267
Score = 96 (38.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 39/196 (19%), Positives = 80/196 (40%)
Query: 479 SVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLY 538
S + C VI + D+ + + EG + ++ + + +FS +I+ W
Sbjct: 32 SFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKL--LFSAGHSRQIRVWDL 89
Query: 539 DNLGSRVDYDAPGHSSTMM--AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGL 596
+ L + GH +M A A G L + G +++ ++ W+ G + G
Sbjct: 90 ETLKCIRSWK--GHEGPVMGMACHASGGLLATAGADRK----VLVWDVDGGFCTHYFRG- 142
Query: 597 GKRSVGVVQF--DTTKNRFLAAGDEFMIKFWDMDNVNLLASIDA--DGGLQASPCIRFNK 652
K V + F D+ KN ++ D+ ++ WD++ N A + A I ++
Sbjct: 143 HKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSE 202
Query: 653 EGILLAVSTNDNGIKI 668
+G+ L + D + +
Sbjct: 203 DGLTLFSAGRDKVVNL 218
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 39/184 (21%), Positives = 80/184 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
IE ++ LA S P+ +L + + G R I+VWD T ++GHE PV + H
Sbjct: 56 IEGESDTLTALALS-PDDKL-LFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHS---STMMAYSADGARLFSCGTNKEG 575
+ + + D K+ W D G Y GH S+++ + + G++
Sbjct: 114 GGL--LATAGADRKVLVWDVDG-GFCTHYFR-GHKGVVSSILFHPDSNKNILISGSD--- 166
Query: 576 ESYLVEWN-ESEGAVKRTYHGLGKRSVGVVQFDTTKN--RFLAAGDEFMIKFWDMDNVNL 632
++ + W+ ++ K+ + K V +++ +AG + ++ WD+ + +
Sbjct: 167 DATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSC 226
Query: 633 LASI 636
A++
Sbjct: 227 KATV 230
Score = 84 (34.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/120 (25%), Positives = 58/120 (48%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKT-KLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
++++++ G ED + I+ + D V LKGH++RI + FS ++++ D + +
Sbjct: 509 RNDSLVCTGSEDRTASIWRLP-DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKI 567
Query: 954 WS-TDGWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLLAVH-ETQIAIYEAPKLECL 1011
W+ +DG S T G T+S L R F D T ++ + + ++ EC+
Sbjct: 568 WAISDG-----SCLKTF-EGHTSSVL---RASFITDGTQFVSCGADGLLKLWNVNTSECI 618
Score = 80 (33.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSN-TLNVLVSSGADSQLCVWS 955
N +I G +D +++++N GH I +AF+ + + VS D L VWS
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 956 TDGWEKQASKFLTIPNGRTASALA 979
DG + + + + + +T S +A
Sbjct: 476 LDGISEDSEEPINL---KTRSVVA 496
Score = 66 (28.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 18/101 (17%), Positives = 37/101 (36%)
Query: 855 DSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYN 913
D VM+ASG K + ++ ++ G D ++++N
Sbjct: 553 DQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DGLLKLWN 611
Query: 914 VRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
V E H+ ++ LA ++ + G D+ + +W
Sbjct: 612 VNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 58 (25.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGL--AFSNTLNVLVSSGA-DSQLC 952
+ +A+ +++Y+V L GH++ + L S++ NVL+ +G+ D +
Sbjct: 370 EEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVR 429
Query: 953 VWS 955
+W+
Sbjct: 430 LWN 432
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 147 (56.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 53/227 (23%), Positives = 98/227 (43%)
Query: 403 GACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
G+ + L +L +T S++ +SP G G + + V ++ D + + H
Sbjct: 73 GSANYKLMCTLEG-HTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGH 128
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
VND+A+S ++ VV+ +D+ +K+++ VT +GH + Y C +
Sbjct: 129 KLGVNDIAWSSDSR--CVVSASDDKTLKIFEIVTSRMTKTLKGHNN--YVFCCNFNPQSS 184
Query: 523 FIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLV 580
+ S + D ++ W D P HS + A ++ DG+ L + G+ +G LV
Sbjct: 185 LVVSGSFDESVRIW--DVKTGMCIKTLPAHSDPVSAVSFNRDGS-LIASGSY-DG---LV 237
Query: 581 E-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
W+ + G +T V V+F LA+ + +K WD
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 48 (22.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 237 GPFQPTPAALPTSLAGWMANPSPVPHPSPSA 267
G P P+ P S++ +NP+ P P SA
Sbjct: 31 GSSAPAPSTSPNSISP--SNPTGTPAPGASA 59
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 209 GARAPSPVTNP--LMGAVPKAGAFPPLSAHGPFQPTPAALPTSLAG 252
G+ AP+P T+P + + P P SA P P A S +G
Sbjct: 31 GSSAPAPSTSPNSISPSNPTGTPAPGASAQ---TPNPNAAGASASG 73
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 147 (56.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 53/227 (23%), Positives = 98/227 (43%)
Query: 403 GACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
G+ + L +L +T S++ +SP G G + + V ++ D + + H
Sbjct: 73 GSANYKLMCTLEG-HTKSISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGH 128
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
VND+A+S ++ VV+ +D+ +K+++ VT +GH + Y C +
Sbjct: 129 KLGVNDIAWSSDSR--CVVSASDDKTLKIFEIVTSRMTKTLKGHNN--YVFCCNFNPQSS 184
Query: 523 FIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLV 580
+ S + D ++ W D P HS + A ++ DG+ L + G+ +G LV
Sbjct: 185 LVVSGSFDESVRIW--DVKTGMCIKTLPAHSDPVSAVSFNRDGS-LIASGSY-DG---LV 237
Query: 581 E-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
W+ + G +T V V+F LA+ + +K WD
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 48 (22.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 237 GPFQPTPAALPTSLAGWMANPSPVPHPSPSA 267
G P P+ P S++ +NP+ P P SA
Sbjct: 31 GSSAPAPSTSPNSISP--SNPTGTPAPGASA 59
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 209 GARAPSPVTNP--LMGAVPKAGAFPPLSAHGPFQPTPAALPTSLAG 252
G+ AP+P T+P + + P P SA P P A S +G
Sbjct: 31 GSSAPAPSTSPNSISPSNPTGTPAPGASAQ---TPNPNAAGASASG 73
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 129 (50.5 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 46/166 (27%), Positives = 77/166 (46%)
Query: 466 VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF 525
+ + FS K L+ T ED+ I+VWD T T ++IF GHE +YS+ N ++I
Sbjct: 319 IRSVCFSPDGKYLA--TGAEDKQIRVWDIATRTIKHIFSGHEQDIYSL--DFAGNGRYIA 374
Query: 526 STATDGKIKAWLYDNLGSRVDYDAPGHSS-TMMAYSADGARLFSCGTNKEGESYLVEWNE 584
S + D ++ W D ++ Y T +A S DG + + +K + W+
Sbjct: 375 SGSGDKTVRLW--DIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKT----VRVWDT 428
Query: 585 SEG-AVKRTYHGLG-KRSVGVVQFDTTKNRFLAAGDEFMIKFWDMD 628
+ G V+R + G K SV V F ++ + IK W+++
Sbjct: 429 TTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELN 474
Score = 68 (29.0 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D + + G +D +Q ++ + L+GH+ + +A S T N+ + D + +W
Sbjct: 508 DGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 48 (22.0 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 26/77 (33%), Positives = 29/77 (37%)
Query: 222 GAVPKAGAFPPLSAHG-PFQPTPAAL---PTSL-AGWMANPSPV-PHPSPSA---GPXXX 272
G P A + HG P Q P AL P++L G MAN P P A G
Sbjct: 110 GVQPVASHVAVPAQHGGPSQAPPPALGHGPSNLFGGIMANQGGSGPGYQPGAAVNGYGPP 169
Query: 273 XXXXXXXXXXKRPRTPP 289
KRPR PP
Sbjct: 170 PPPTASPGPGKRPRAPP 186
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 150 (57.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 67/288 (23%), Positives = 116/288 (40%)
Query: 399 VWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
VW L S+P + S + +R + D L + + ++ + G L N +
Sbjct: 110 VWSLAFGSSVPEKQSRCVNI--EWHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLM 167
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGHESPVYSICPH 516
+ H V DL F+ P+ L +V+ D+ ++VWD G + GH++ VY C
Sbjct: 168 D---HTEVVRDLTFA-PDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYG-CAF 222
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKE 574
++ + S + W D S + GH + ++A +S DGA L + + +
Sbjct: 223 SPDS-SILCSVGASKAVFLWDMDKY-SMIR-KLEGHHNDVVACEFSPDGALLATA--SYD 277
Query: 575 GESYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFLAAGDEFMI 622
Y+ W+ G + R + H G R V V F + D+ M+
Sbjct: 278 TRVYV--WDPYIGVILREFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIASLADDKMV 335
Query: 623 KFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILA 670
+FW +D + + GL C F+ +G +LA T D + A
Sbjct: 336 RFWRIDEEYPVQVAPLNNGL----CCTFSTDGSVLAAGTQDGSVHFWA 379
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 148 (57.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L S + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLSGNSWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSKSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNPHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + I + S + D IK + L S D A H+ST+ + + ADG RL
Sbjct: 152 KRVVWHPTKEI--LASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>MGI|MGI:2139593 [details] [associations]
symbol:Wdr47 "WD repeat domain 47" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:2139593 GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0005874 EMBL:AL683823 EMBL:CH466607 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
CTD:22911 HOGENOM:HOG000231412 HOVERGEN:HBG058798 EMBL:AK122397
EMBL:BC040337 IPI:IPI00330193 RefSeq:NP_852065.2 UniGene:Mm.285968
ProteinModelPortal:Q8CGF6 SMR:Q8CGF6 DIP:DIP-58945N
PhosphoSite:Q8CGF6 PaxDb:Q8CGF6 PRIDE:Q8CGF6
Ensembl:ENSMUST00000051145 GeneID:99512 KEGG:mmu:99512
InParanoid:A2AGC7 OMA:RVCAYPD OrthoDB:EOG4640B8 NextBio:353995
Bgee:Q8CGF6 CleanEx:MM_WDR47 Genevestigator:Q8CGF6
GermOnline:ENSMUSG00000040389 Uniprot:Q8CGF6
Length = 920
Score = 114 (45.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 48/185 (25%), Positives = 90/185 (48%)
Query: 7 ELVFLILQFLDEEKFKETVHKLEQDSG-----FFFNMRYFEDMVTNGEWDEVEKYLSGFT 61
E++ LIL FL+ +K ++ LE++SG F +M + ++ +G+WDEV +++
Sbjct: 13 EIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLE 72
Query: 62 KVDDNRYSMKIF-FEIRKQKYLEAL------DKRDRAKAVEILVKD-LKVFSAFNE---- 109
++ ++ K F + I KQK+LEAL D + +E +++ ++ A E
Sbjct: 73 CME--KFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPS 130
Query: 110 -DLFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLI-EANPLFRDKLQFPSLK 167
D + ++ LLTL ++ + + + +AR E+ ++ E P R KL K
Sbjct: 131 KDDYSKLCLLLTLPRLTNHAEFKDWNPS-TARVHCFEEVCVMVAEFIPADR-KLSEAGFK 188
Query: 168 NSRLR 172
S R
Sbjct: 189 ASNNR 193
Score = 93 (37.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 70/310 (22%), Positives = 121/310 (39%)
Query: 334 SLGQSSYSTDDLPK---TVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRE 390
+L +S DD K + TL AV+++ FHP L VG+N +
Sbjct: 582 NLSRSKGEEDDKSKKQFVCINTLEDTQAVRAVAFHPSGS-LYAVGSNSKTL--------- 631
Query: 391 RIAVKSFKVWELGACSMPLQASL----SSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYT 446
R+ K+ + A P Q + + + S+ V WSP G L + V +
Sbjct: 632 RVCAYPEKM-DASAHDNPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLP 690
Query: 447 YHGG--DELRNHLEIEAHVGSVNDLAFSY-PNKQLSV-VTCGE-DRVIKVWDAVTGTKQY 501
++ + LE H G++ DLAF P ++ ++ G D I D G +
Sbjct: 691 FNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLH 750
Query: 502 IFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYDNLGSRV---DYDAPGHSSTMM 557
GH + ++ + + I S + D ++ W L RV + G + +
Sbjct: 751 ALSGHTGHILAL---YTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASV 807
Query: 558 AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAG 617
A G RL + G +E S ++ ++ G + ++YH V V+F + L
Sbjct: 808 AVDPSG-RLLATG--QEDSSCML-YDIRGGRMVQSYHPHSS-DVRSVRFSPGAHYLLTGS 862
Query: 618 DEFMIKFWDM 627
+ IK D+
Sbjct: 863 YDMKIKVTDL 872
Score = 68 (29.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDG 958
++A G EDSS +Y++R + H + + FS + L++ D ++ V G
Sbjct: 815 LLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQG 874
Score = 54 (24.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 647 CIRFNKEGILLAVSTNDNGIKILA-NADGIRLLRT-VESRTFDASRVASAAIVKAPAIG- 703
C+ ++ G LLA +ND +K+L NA+ +E D + + A ++ P G
Sbjct: 667 CVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGT-IRDLAFMEGPESGG 725
Query: 704 ----TFGSANANVGTSLGERTAPAAAMVGMSNDSRN-FTDVKPKIADEAVEKS-RIWKL 756
+ G+ + N+ T+ +R A+ G + +T IA + +K+ R W L
Sbjct: 726 AILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDL 784
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 63/254 (24%), Positives = 107/254 (42%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L +H + R + H +V + FS P+ L + + D+ +++W + +F
Sbjct: 5 LMVWHMKPQSRAY-RFTGHKDAVTCVNFS-PSGHL-LASGSRDKTVRIWVPNVKGESTVF 61
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGK-IKAWLYDNLGSRVDYDAPGHSSTMMA--YS 560
H + V S+ H + Q F TA+D K +K W + + H + + +S
Sbjct: 62 RAHTATVRSV--HFCSDGQS-FVTASDDKTVKVWATHR--QKFLFSLSQHINWVRCAKFS 116
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTY--HGLGKRSVGVVQFDTTKNRFLAAGD 618
DG + S +K + W++S +Y HG G V V F + AAG
Sbjct: 117 PDGRLIVSASDDKTVKL----WDKSSRECVHSYCEHG-G--FVTYVDFHPSGTCIAAAGM 169
Query: 619 EFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLL 678
+ +K WD+ LL A + F+ G L +++D+ +KIL +G RLL
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSA--AVNGLSFHPSGNYLITASSDSTLKILDLMEG-RLL 226
Query: 679 RTVESRTFDASRVA 692
T+ A+ VA
Sbjct: 227 YTLHGHQGPATTVA 240
Score = 99 (39.9 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP N +I DS+++I ++ + L GHQ T +AFS T S G+D Q+
Sbjct: 200 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 258
Query: 953 VWSTD 957
VW ++
Sbjct: 259 VWKSN 263
Score = 97 (39.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 36/185 (19%), Positives = 75/185 (40%)
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRV 545
D + VW ++ Y F GH+ V C + + + S + D ++ W+ + G
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAV--TCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST 59
Query: 546 DYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGV 603
+ A H++T+ + + +DG + +K + + + + + H V
Sbjct: 60 VFRA--HTATVRSVHFCSDGQSFVTASDDKTVKVWAT--HRQKFLFSLSQH---INWVRC 112
Query: 604 VQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTND 663
+F ++A D+ +K WD + + S GG + F+ G +A + D
Sbjct: 113 AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMD 170
Query: 664 NGIKI 668
N +K+
Sbjct: 171 NTVKV 175
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLTGSTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNSHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + + + S + D IK + D + + D A H+ST+ + ADG RL
Sbjct: 152 KRVVWHPTKEV--LASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 133 (51.9 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ + + D+ IK+WD TG
Sbjct: 304 LFMWSPAEDKKPLARMTGHQALINQVLFS-PDSRI-IASASFDKSIKLWDGRTGKYLASL 361
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH + VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 362 RGHVAAVYQIA--WSADSRLLVSGSSDSTLKVW--DVKAQKLAADLPGHADEVYAVDWSP 417
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 418 DGQRVASGGKDK 429
Score = 105 (42.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 55/216 (25%), Positives = 91/216 (42%)
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
EGH V S+ +++ S + D ++ W D + GH +++ +S
Sbjct: 62 EGHSEAVISVA--FSPTGKYLASGSGDTTVRFW--DLSTETPHFTCQGHRHWVLSISWSP 117
Query: 562 DGARLFSCGTNKEGESYLVEWNESEGA-VKRTYHGLGKRSVGVVQFDTTKN---RFLAAG 617
DG L S G K G+ L W+ S G V R G K G+ N R++A+
Sbjct: 118 DGKTLAS-GC-KNGQILL--WDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 618 D-EFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIR 676
+ ++ WD I G Q+ C+R+ +G+L + S D IK+ DG+
Sbjct: 174 SKDGSVRVWDT-TAGRCERI-LTGHTQSVTCLRWGGDGLLYSAS-QDRTIKVWRAHDGV- 229
Query: 677 LLRTVESRTFDASRVASAAIVKAPAIGTFGSANANV 712
L RT++ + +A + A G F A A++
Sbjct: 230 LCRTLQGHGHWVNTMALSTDY-ALRTGAFEPAEASI 264
Score = 103 (41.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 56/277 (20%), Positives = 110/277 (39%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS--YPNKQLS-V 480
+ WSPDG + L+ G ++ L H + L++ + N + +
Sbjct: 113 ISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLA--GHSKWITGLSWEPLHANPECRYM 170
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYD 539
+ +D ++VWD G + I GH V C + ++S + D IK W +D
Sbjct: 171 ASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAHD 227
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ R GH MA S D A G + E+ + + +G+++ R
Sbjct: 228 GVLCRT-LQGHGHWVNTMALSTDYA--LRTGAFEPAEAS-INAQDLQGSLQEL-KDRALR 282
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD-MDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
+V+ + R ++ D+F + W ++ LA + L + F+ + ++A
Sbjct: 283 RYNLVRGQGPE-RLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQ--VLFSPDSRIIA 339
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
++ D IK+ G + L ++ ++A +A
Sbjct: 340 SASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSA 375
Score = 94 (38.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/187 (24%), Positives = 80/187 (42%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+E H +V +AFS K L+ + D ++ WD T T + +GH V SI
Sbjct: 61 LEGHSEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSIS--WS 116
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYS-----ADGARLFSCGTNK 573
+ + + S +G+I W + G +V GHS + S A+ + ++K
Sbjct: 117 PDGKTLASGCKNGQILLW-DPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+G S V W+ + G +R G +SV +++ + A+ D IK W + L
Sbjct: 176 DG-SVRV-WDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDR-TIKVWRAHDGVLC 231
Query: 634 ASIDADG 640
++ G
Sbjct: 232 RTLQGHG 238
Score = 92 (37.4 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ IIA D SI++++ R + L+GH + +A+S +LVS +DS L VW
Sbjct: 334 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 392
Score = 78 (32.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++V+ ++ L GH + + +S + S G D L +W
Sbjct: 376 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 63 (27.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 903 GMEDSSIQIYNVRVDEVK-TKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEK 961
G +D ++ +++ D+ ++ GHQ I + FS ++ S+ D + +W DG
Sbjct: 298 GSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW--DG--- 352
Query: 962 QASKFLTIPNGRTAS 976
+ K+L G A+
Sbjct: 353 RTGKYLASLRGHVAA 367
Score = 55 (24.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 313 GISDEVNNLSVNILPVA-YTPQSLGQSSYSTDDLPKTVVMTLNQGSA--VKSMDFHPVQQ 369
G S+ V +SV P Y G ++ DL QG V S+ + P +
Sbjct: 63 GHSEAV--ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 370 ILLVVGTNMGDVMLWEVGSRERIA--VKSFKVWELGACSMPLQASLSSDYTASVNR 423
L G G ++LW+ + +++ + W G PL A+ Y AS ++
Sbjct: 121 TL-ASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSK 175
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 152 (58.6 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 53/229 (23%), Positives = 101/229 (44%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
L+ + H VN + +S P+ QL + T +D +KVW+ ++GT F H + V ++ H
Sbjct: 383 LKQQGHYFDVNCVTYS-PDSQL-LATGADDNKVKVWNVMSGTCFITFTEHTNAVTAL--H 438
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSC-GTNKEG 575
+ + S + DG ++AW + + Y P ++ +AD + C GT
Sbjct: 439 FMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQ-FVSLTADPSGDVVCAGTLDSF 497
Query: 576 ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
E ++ W++ G +K G + V + F ++ ++ ++ WD+ +
Sbjct: 498 EIFV--WSKKTGQIKDILSG-HEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK--GT 552
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESR 684
++ + F +G LA ST D I +G+ L+ T+E R
Sbjct: 553 VETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGV-LMYTIEGR 600
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/292 (22%), Positives = 112/292 (38%)
Query: 389 RERIAVKSFKVWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTY 447
RE I VW L S+P + S + +R + D L + + ++
Sbjct: 100 REHIIDCGDIVWSLAFGSSVPEKQSRCVNI--EWHRFRFGQDQLLLATGLNNGRIKIWDV 157
Query: 448 HGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGH 506
+ G L N ++ H V DL F+ P+ L +V+ D+ ++VWD G + GH
Sbjct: 158 YTGKLLLNLVD---HTEVVRDLTFA-PDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGH 213
Query: 507 ESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL 566
++ VYS C ++ + S + W D + H +S DGA L
Sbjct: 214 QNWVYS-CAFSPDS-SMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFL 614
+ + + Y+ W+ G + + H G R V V F
Sbjct: 272 ATA--SYDTRVYI--WDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 615 AAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
+ D+ M++FW +D + GL C F+ +G +LA T+D +
Sbjct: 328 SLADDKMVRFWRIDEDYPVQVAPLSNGL----CCAFSTDGSVLAAGTHDGSV 375
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/292 (22%), Positives = 112/292 (38%)
Query: 389 RERIAVKSFKVWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTY 447
RE I VW L S+P + S + +R + D L + + ++
Sbjct: 100 REHIIDCGDIVWSLAFGSSVPEKQSRCVNI--EWHRFRFGQDQLLLATGLNNGRIKIWDV 157
Query: 448 HGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGH 506
+ G L N ++ H V DL F+ P+ L +V+ D+ ++VWD G + GH
Sbjct: 158 YTGKLLLNLVD---HTEVVRDLTFA-PDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGH 213
Query: 507 ESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL 566
++ VYS C ++ + S + W D + H +S DGA L
Sbjct: 214 QNWVYS-CAFSPDS-SMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFL 614
+ + + Y+ W+ G + + H G R V V F
Sbjct: 272 ATA--SYDTRVYI--WDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 615 AAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
+ D+ M++FW +D + GL C F+ +G +LA T+D +
Sbjct: 328 SLADDKMVRFWRIDEDYPVQVAPLSNGL----CCAFSTDGSVLAAGTHDGSV 375
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 108 (43.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
S+++ SV V ++ DG S + LY G + + E H + DL +
Sbjct: 11 SNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHS---FEEHGYGIGDLVSTSD 67
Query: 475 NKQLSVVTCGEDRVIKVWDAVTGTKQYIFEG-HESPVYSICPHHKENIQFIFSTATDGKI 533
NKQL +C E ++ + WD +G F+ H + S+C + + +FS ++D +
Sbjct: 68 NKQL--FSCAEKQLYQ-WDIASGQVIRRFQNAHNDTITSVCVNLDSTL--LFSGSSDRLV 122
Query: 534 KAW 536
KAW
Sbjct: 123 KAW 125
Score = 84 (34.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+++I G ED+ IY + ++ +KL GH IT + + N ++S D + +W
Sbjct: 263 DDSLIISGSEDNDFYIYELLSGKLLSKLSGHSNIITHVDSHPSKNQFITSSTDCTIRIW 321
Score = 83 (34.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 28/140 (20%), Positives = 63/140 (45%)
Query: 502 IFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD-NLGSRV-DYDAPGHSSTMMAY 559
+ H V ++ ++ + + S ++D IK LY+ + GS + ++ G+ +
Sbjct: 9 VLSNHSGSV-TVVKYNSDG-GYCLSGSSDKSIK--LYNVSKGSMIHSFEEHGYGIGDLVS 64
Query: 560 SADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
++D +LFSC E L +W+ + G V R + ++ V + + +
Sbjct: 65 TSDNKQLFSCA-----EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSD 119
Query: 620 FMIKFWDM--DNVNLLASID 637
++K WD+ ++N + +D
Sbjct: 120 RLVKAWDLRTKSINPVQILD 139
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 135 (52.6 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ + + D+ IK+WD TG
Sbjct: 354 LFLWSPAEDKKPLARMTGHQALINQVVFS-PDSRV-IASASFDKSIKLWDGRTGKYLASL 411
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH + VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 412 RGHVAAVYQIA--WSADSRLLVSGSSDSTLKVW--DVKAQKLSTDLPGHADEVYAVDWSP 467
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 468 DGQRVASGGKDK 479
Score = 106 (42.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 50/189 (26%), Positives = 83/189 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC--PH 516
+E H +V +AFS K L+ + D ++ WD T T + +GH V SI P
Sbjct: 111 LEGHSEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 168
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYS-----ADGARLFSCGT 571
K+ + S +G+I W + G +V GHS + A S A+ + +
Sbjct: 169 GKK----LASGCKNGQILLW-DPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
+K+G S V W+ + G +RT G + SV +++ + A+ D IK W +
Sbjct: 224 SKDG-SVRV-WDTTAGRCERTLTGHAQ-SVTCLRWGGDGLLYSASQDR-TIKVWRAHDGV 279
Query: 632 LLASIDADG 640
L ++ G
Sbjct: 280 LCRTLQGHG 288
Score = 103 (41.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 54/216 (25%), Positives = 92/216 (42%)
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
EGH V S+ +++ S + D ++ W D + GH +++ +S
Sbjct: 112 EGHSEAVISVA--FSPTGKYLASGSGDTTVRFW--DLSTETPHFTCQGHRHWVLSISWSP 167
Query: 562 DGARLFSCGTNKEGESYLVEWNESEGA-VKRTYHGLGKRSVGVVQFDTTKN---RFLAAG 617
DG +L S G K G+ L W+ S G V R G K + N R++A+
Sbjct: 168 DGKKLAS-GC-KNGQILL--WDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 618 D-EFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIR 676
+ ++ WD ++ G Q+ C+R+ +G+L + S D IK+ DG+
Sbjct: 224 SKDGSVRVWDTTAGRCERTLT--GHAQSVTCLRWGGDGLLYSAS-QDRTIKVWRAHDGV- 279
Query: 677 LLRTVESRTFDASRVASAAIVKAPAIGTFGSANANV 712
L RT++ + +A + A G F A A+V
Sbjct: 280 LCRTLQGHGHWVNTMALSTDY-ALRTGAFEPAEASV 314
Score = 95 (38.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 57/277 (20%), Positives = 108/277 (38%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS--YPNKQLS-V 480
+ WSPDG + L+ G ++ L H + L++ + N + V
Sbjct: 163 ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALT--GHSKWITALSWEPLHANPECRYV 220
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYD 539
+ +D ++VWD G + GH V C + ++S + D IK W +D
Sbjct: 221 ASSSKDGSVRVWDTTAGRCERTLTGHAQSV--TCLRWGGD-GLLYSASQDRTIKVWRAHD 277
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ R GH MA S D A G + E+ V + G+++ R
Sbjct: 278 GVLCRT-LQGHGHWVNTMALSTDYA--LRTGAFEPAEAS-VNAQDLRGSLQELKERALSR 333
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD-MDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
+V+ + R ++ D+F + W ++ LA + L + F+ + ++A
Sbjct: 334 -YNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQ--VVFSPDSRVIA 389
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
++ D IK+ G + L ++ ++A +A
Sbjct: 390 SASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSA 425
Score = 91 (37.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ +IA D SI++++ R + L+GH + +A+S +LVS +DS L VW
Sbjct: 384 DSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 442
Score = 84 (34.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++V+ ++ T L GH + + +S + S G D L +W
Sbjct: 426 DSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 66 (28.3 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 903 GMEDSSIQIYNVRVDEVK-TKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEK 961
G +D ++ +++ D+ ++ GHQ I + FS V+ S+ D + +W DG
Sbjct: 348 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW--DG--- 402
Query: 962 QASKFLTIPNGRTAS 976
+ K+L G A+
Sbjct: 403 RTGKYLASLRGHVAA 417
Score = 53 (23.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 313 GISDEVNNLSVNILPVA-YTPQSLGQSSYSTDDLPKTVVMTLNQGSA--VKSMDFHPVQQ 369
G S+ V +SV P Y G ++ DL QG V S+ + P +
Sbjct: 113 GHSEAV--ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 370 ILLVVGTNMGDVMLWEVGSRERI--AVKSFKVWELGACSMPLQASLSSDYTASVNR 423
L G G ++LW+ + +++ A+ W PL A+ Y AS ++
Sbjct: 171 -KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSK 225
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 115 (45.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 52/225 (23%), Positives = 94/225 (41%)
Query: 412 SLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAF 471
SL D + + SPD + ++ + + +R + H+ V + F
Sbjct: 61 SLEQDDQEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAV--HIAPVATMVF 118
Query: 472 SYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDG 531
+ L+ C D IK+WD + + +G V+ + H + +FS++ D
Sbjct: 119 DSTSTLLATGGC--DSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDY 176
Query: 532 KIKAWLYDNLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAV 589
KI+ W D S+ GH S T +A++ADG L S G +K + ++ ES +
Sbjct: 177 KIRIW--DLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTI 234
Query: 590 KRTYHGLGKRSVGVVQFDTT----KNR---FLAAGDEFMIKFWDM 627
Y + + Q D + K + FL AG + ++K W++
Sbjct: 235 P-IYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEV 278
Score = 87 (35.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/215 (20%), Positives = 94/215 (43%)
Query: 747 AVEKSRIWKLTEITEPSQC--RSLRLPDNLTAMRVSRLIYTNSGL-AILALASNA--VHK 801
AV SR+ + +T C + +P++LT+ + LI L A + + ++
Sbjct: 436 AVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINS 495
Query: 802 LWKWPRNERNSTGKATTNQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSA 861
+ P ++ +TG + ++ +LW P L+ T + + C S D + ++
Sbjct: 496 VAVSPNDKLIATG--SQDRLAKLWSCPDCSLLG---VFTGHKRGIWCVQFSPVDQILATS 550
Query: 862 SG-GKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDE-V 919
S G + L+ + +++ G D ++++ ++ +E V
Sbjct: 551 SADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLS-GGSDGLLKLWTIKTNECV 609
Query: 920 KTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
KT L GH+ +I GL + +++V++ +DS + +W
Sbjct: 610 KT-LDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 62 (26.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 40/212 (18%), Positives = 82/212 (38%)
Query: 747 AVEKS-RIWKLTEITEP-SQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLWK 804
A +KS R+W++ + + L + A+ SRL + ++ + + K+W
Sbjct: 405 AKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKES----FVVTSSQDCTIKVWN 460
Query: 805 WPRNERNSTGKATTNQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGG 864
P + S KA P+ MT D + + A+S ND + + S
Sbjct: 461 IPES-LTSKAKAALISGPETLHAQ----MTERGHDKD----INSVAVSPNDKLIATGSQD 511
Query: 865 KIS-LFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKL 923
+++ L++ P D I+A D +++++ ++
Sbjct: 512 RLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQ-ILATSSADGTLKLWGLQDFSCLKTF 570
Query: 924 KGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
+GH + + F + L+S G+D L +W+
Sbjct: 571 EGHDASVLKIIFVSRGTQLLSGGSDGLLKLWT 602
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 55/280 (19%), Positives = 103/280 (36%)
Query: 390 ERIAVKSF-KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYH 448
++IA SF K +L + +TA + + ++P TL L+
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 449 GGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHES 508
G+E+ + H + L+F+ + ++T D + VW+A TG K Y GH +
Sbjct: 208 SGEEV---FTLTGHSAEIISLSFNTSGNR--IITGSFDHTVTVWEADTGRKVYTLIGHCA 262
Query: 509 PVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFS 568
+ S + I + + D K W D + + GH ++ D
Sbjct: 263 EISSAV--FNWDCSLILTGSMDKTCKLW--DAVNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 569 CGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMD 628
+ +G + + E K H + + + F+ NR L + + WD
Sbjct: 319 ATASADGTARIFSAATRECVTKLEGH---EGEISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Query: 629 NVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
L ++ + C FN +G ++ + DN +I
Sbjct: 376 TGQCLQVLEGHTD-EIFSCA-FNYKGDIIITGSKDNTCRI 413
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 55/265 (20%), Positives = 105/265 (39%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGE-DRVIKVWDAVTGTKQYIFEGHESPVYSICPHH 517
+ AH+ + ++A NK S G DR K+WD +G + + EGH + VY+I ++
Sbjct: 88 LRAHILPLTNVAL---NKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGES 577
+ I + + D K W + + + GH++ ++ S + + + +
Sbjct: 145 PYGDK-IATGSFDKTCKLWSVET--GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 578 YLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASID 637
L W+ G T G + + F+T+ NR + + + W+ D + ++
Sbjct: 202 KL--WDIQSGEEVFTLTGHSAEIISL-SFNTSGNRIITGSFDHTVTVWEADTGRKVYTLI 258
Query: 638 ADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADG--IRLLRTVESRTFDAS-RVASA 694
+ S + FN + L+ + D K+ +G + L + D+
Sbjct: 259 GHCA-EISSAV-FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 695 AIVKAPAIGT---FGSANANVGTSL 716
I A A GT F +A T L
Sbjct: 317 LIATASADGTARIFSAATRECVTKL 341
Score = 83 (34.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDG 958
+IA D + +I++ E TKL+GH+ I+ ++F+ N L++ +D +W
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIW---- 372
Query: 959 WEKQASKFLTIPNGRT 974
+ Q + L + G T
Sbjct: 373 -DAQTGQCLQVLEGHT 387
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 105 (42.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 47/199 (23%), Positives = 84/199 (42%)
Query: 5 SRELVFLILQFLDEEKFKETVHKLEQDSGFFFN----MRYFEDMVTNGEWDEVEKYLSGF 60
S +++ LI Q+L E +T+ L++++G N + F ++NG WD V K
Sbjct: 7 SADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVLKVTQSL 66
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEIL--VKDLKVFSAFNEDLFKEITQL 118
K+ D + + +Q LE ++ R+ A +L + + + + + +
Sbjct: 67 -KLPDKK-----LLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENM 120
Query: 119 LTLENFRDNEQLSKYGDTKSARGIMLA-ELKKLIEANPLFRDKLQFPSLKNSRLRTLINQ 177
L F E ++ G +K R ++A EL + P +SRL L+ Q
Sbjct: 121 LQRAYFDPREAYAE-GSSKEKRRTVIAQELSGEVHVVP------------SSRLLALLGQ 167
Query: 178 SLNWQ-HQLCKNPRANPDI 195
+L WQ HQ P D+
Sbjct: 168 ALKWQQHQGLLPPGTTIDL 186
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/114 (18%), Positives = 47/114 (41%)
Query: 843 EDAVPCFALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIA 901
E AV S++ V S A G+I ++ +DN+ +
Sbjct: 264 EQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVL 323
Query: 902 IGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D +++++ ++ ++ + KGH + F+ + ++S+ +D + VWS
Sbjct: 324 SASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWS 377
Score = 70 (29.7 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 38/183 (20%), Positives = 73/183 (39%)
Query: 421 VNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH----VGSVNDLAFSYPNK 476
V +SPDG + ++ + G ++R L+ +A + LA ++
Sbjct: 217 VECAQFSPDGQYLITGSVDGFLEVWNFTTG-KVRKDLKYQAQDQFMMMEQAVLALNFSRD 275
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
V + +D IKVW +TG FE + + ++N Q + S + D ++
Sbjct: 276 SEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQ-VLSASFDYTVR-- 332
Query: 537 LYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
L+ ++ + GHSS + ++ DG + S + + + W+ TY
Sbjct: 333 LHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASS----DGTVKVWSLKTTECVATYK 388
Query: 595 GLG 597
LG
Sbjct: 389 PLG 391
Score = 68 (29.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 481 VTC-GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
+ C GED+V+ + +G + HE V + H +N+ + S + DG +K W
Sbjct: 453 IYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQNL--LASYSEDGLLKLW 507
Score = 64 (27.6 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P+ I G ED + ++V +++ L H+K + GL N+L S D L +
Sbjct: 448 PRGEFIYCAG-EDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQNLLASYSEDGLLKL 506
Query: 954 W 954
W
Sbjct: 507 W 507
Score = 63 (27.2 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 26/159 (16%), Positives = 58/159 (36%)
Query: 514 CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNK 573
C + Q++ + + DG ++ W + R D MM A A FS +
Sbjct: 219 CAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEM 278
Query: 574 --EG--ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDN 629
G + + W G R + + + +QF ++ L+A ++ ++ + +
Sbjct: 279 VASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKS 338
Query: 630 VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+L F +G + +++D +K+
Sbjct: 339 GKMLKEFKGHSSFVNEAT--FTPDGHSVLSASSDGTVKV 375
Score = 47 (21.6 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTGKATTNQ 820
V+ +T G ++L+ +S+ K+W E +T K N+
Sbjct: 352 VNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLGNE 393
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 70/290 (24%), Positives = 119/290 (41%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGT-LFGVAYSKHIVHLYTYHGGDEL 453
++ K+W+L S L+ +L+ + A+V + SP LF K +V + +
Sbjct: 185 RTIKIWDLA--SGVLKLTLTG-HIATVRGLAVSPRHPYLFSCGEDK-MVKCWDLETNKVI 240
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
R++ H+ V L +P + +VT G D V +VWD T ++ GH+S V S+
Sbjct: 241 RHY---HGHLSGVYALKL-HPTLDV-LVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASL 295
Query: 514 CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL-FSCGTN 572
+E + + + D I+ W D + H T+ A S F+ G++
Sbjct: 296 AV--QEFDPQVVTGSMDSTIRLW--DLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSS 351
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD------ 626
+ W EGA + G V + ++ F A + M FWD
Sbjct: 352 DN----IKHWKFPEGAFMGNFEG-HNAIVNTLSINSDNVMFSGADNGSMC-FWDWKSGHK 405
Query: 627 ---MDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANAD 673
+ +V S+D++ G+ AS F+K G+ L D +KI D
Sbjct: 406 YQELQSVVQPGSLDSEAGIFASS---FDKTGLRLITCEADKSVKIYKQVD 452
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/213 (24%), Positives = 93/213 (43%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T S++ V +SP G G + + V ++ +L + H VND A+S +K
Sbjct: 78 HTKSISAVKFSPCGKFLGTSSADKTVKIWNM---SDLSCERTLTGHKLGVNDFAWSADSK 134
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
S+VT +D+ +K+++ T +GH + Y C + + S + D ++ W
Sbjct: 135 --SIVTASDDKTLKIYEVPTVKMAKTLKGHTN--YVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 537 LYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVE-WNESEGAVKRTY 593
G V P HS + A ++ DG+ L + G+ +G LV W+ + G +T
Sbjct: 191 DV-RTGMCVK-TLPAHSDPVSAVSFNRDGS-LITSGSY-DG---LVRIWDTANGQCVKTL 243
Query: 594 HGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
V V+F L++ + +K WD
Sbjct: 244 VDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 66/292 (22%), Positives = 112/292 (38%)
Query: 389 RERIAVKSFKVWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTY 447
RE I VW L S+P + S + +R + D L + + ++
Sbjct: 100 REHIIDCGDIVWSLAFGSSVPEKQSRCVNI--EWHRFRFGQDQLLLATGLNNGRIKIWDV 157
Query: 448 HGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGH 506
+ G L N ++ H V DL F+ P+ L +V+ D+ ++VWD G + GH
Sbjct: 158 YTGKLLLNLVD---HTEVVRDLTFA-PDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGH 213
Query: 507 ESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL 566
++ VYS C ++ + S + W D + H +S DGA L
Sbjct: 214 QNWVYS-CAFSPDS-SMLCSVGASKAVFLWDMDKYTMIRKLEGHHHDVVACDFSPDGALL 271
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFL 614
+ + + Y+ W+ G + + H G R V V F
Sbjct: 272 ATA--SYDTRVYI--WDPHTGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 615 AAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
+ D+ M++FW +D + GL C F+ +G +LA T+D +
Sbjct: 328 SLADDKMVRFWRIDEDYPVQVAPLSNGL----CCAFSTDGSVLAAGTHDGSV 375
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ V + D+ IK+WD TG
Sbjct: 355 LFLWSPAEDKKPLARMTGHQALINQVLFS-PDSRI-VASASFDKSIKLWDGRTGKYLASL 412
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH + VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 413 RGHVAAVYQIA--WSADSRLLVSGSSDSTLKVW--DVKAQKLTTDLPGHADEVYAVDWSP 468
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 469 DGQRVASGGKDK 480
Score = 112 (44.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 59/277 (21%), Positives = 110/277 (39%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS--YPNKQLS-V 480
+ WSPDG + L+ G ++ L H + L++ + N + V
Sbjct: 164 ISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLT--GHSKWITGLSWEPLHMNPECRYV 221
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYD 539
+ +D ++VWD G + I GH V C + ++S + D IK W +D
Sbjct: 222 ASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAHD 278
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ R GH MA S D A G + E+ V + +G++K R
Sbjct: 279 GVLCRT-LQGHGHWVNTMALSTDYA--LRTGAFEPAEA-TVNAQDLQGSLKELKERASSR 334
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD-MDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
+V+ + R ++ D+F + W ++ LA + L + F+ + ++A
Sbjct: 335 -YNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQ--VLFSPDSRIVA 390
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
++ D IK+ G + L ++ ++A +A
Sbjct: 391 SASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSA 426
Score = 98 (39.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 47/189 (24%), Positives = 82/189 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC--PH 516
+E H +V +AFS K L+ + D ++ WD T T + +GH V SI P
Sbjct: 112 LEGHSEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 169
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL-----FSCGT 571
K+ + S +G+I W + G++V GHS + S + + + +
Sbjct: 170 GKK----LASGCKNGQILLW-DPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
+K+G S V W+ + G +R G +SV +++ + A+ D IK W +
Sbjct: 225 SKDG-SVRV-WDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDR-TIKVWRAHDGV 280
Query: 632 LLASIDADG 640
L ++ G
Sbjct: 281 LCRTLQGHG 289
Score = 91 (37.1 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ I+A D SI++++ R + L+GH + +A+S +LVS +DS L VW
Sbjct: 385 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 443
Score = 83 (34.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++V+ ++ T L GH + + +S + S G D L +W
Sbjct: 427 DSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNSHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + I + S + D IK + + + + D A H+ST+ + ADG RL
Sbjct: 152 KRVVWHPTKEI--LASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 140 (54.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W+ Y +GH V + H+
Sbjct: 62 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMEL--HY 117
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 176 VKL--WDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 232 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L+ +G + N+ ++ H
Sbjct: 52 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG--DCDNYATLKGH 108
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 109 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 165
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 166 LVCTGSDDGTVKLW 179
Score = 51 (23.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAF 935
D + IA G D + +++ + KL GH I +AF
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 335
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHH 517
++ H VN +FS P+ + + T D +++WD TG GH + VY C
Sbjct: 384 KMHGHQKVVNHASFS-PDGRC-IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQ-CAWS 440
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNK 573
++ + + S++ D +K W D ++ +D PGH + A +S DG R+ S G +K
Sbjct: 441 TDS-RLLVSSSQDTTLKVW--DVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADK 495
Score = 107 (42.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 55/290 (18%), Positives = 114/290 (39%)
Query: 398 KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYT-YHG---GDEL 453
++W+ C + +T V+ V W+PD ++ + + + G GD L
Sbjct: 160 RLWD---CDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDAL 216
Query: 454 RNHLE-IEAHVGSVNDLAFSYPNKQLSVVTCG-EDRVIKVWDAVTGTKQYIFEGHESPVY 511
R H + I A LA P+ ++ G +D +++W+ T + GH +P+
Sbjct: 217 RRHTKPIMALCWQPLHLA---PDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT 273
Query: 512 SICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGT 571
+ +N +I+S++ D I+ W D + + GH++ + S + G
Sbjct: 274 CV-RWGGQN--WIYSSSYDKTIRIW--DAKDGKCLHILKGHAARVNHLSLSTEHVLRSGA 328
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
+ +++ K Y K+S G R ++A D+ + WD +
Sbjct: 329 YDHTDFKPKSFSDERRKAKERYEACLKQS-G--------ERLVSASDDLQLILWDPQK-S 378
Query: 632 LLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTV 681
G + F+ +G +A ++ D+ +++ G + L T+
Sbjct: 379 TKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTG-KFLATL 427
Score = 105 (42.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 421 VNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSV 480
VN +SPDG A V L+ G L + HV +V A+S ++ L
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLAT---LRGHVAAVYQCAWSTDSRLL-- 446
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
V+ +D +KVWD + ++ GHE V+++ + Q + S D ++ W
Sbjct: 447 VSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAV--DWSPDGQRVASGGADKAVRIW 500
Score = 87 (35.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 15/60 (25%), Positives = 36/60 (60%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D+ ++ +D+++++++VR ++K L GH+ ++ + +S + S GAD + +WS
Sbjct: 442 DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 86 (35.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D IA DSS+++++ + + L+GH + A+S +LVSS D+ L VW
Sbjct: 400 DGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWD 459
Query: 956 T-------D--GWEKQASKFLTIPNG-RTASALADTRVQ 984
D G E Q P+G R AS AD V+
Sbjct: 460 VRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVR 498
Score = 81 (33.6 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 39/184 (21%), Positives = 74/184 (40%)
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRV 545
D+ I++WDA G +I +GH + V + + ++ TD K K++ + ++
Sbjct: 289 DKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKE 348
Query: 546 DYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT-YHGLGKRSVGVV 604
Y+A G RL S + + L+ W+ + T HG ++ V
Sbjct: 349 RYEA--------CLKQSGERLVSASDDLQ----LILWDPQKSTKPITKMHG-HQKVVNHA 395
Query: 605 QFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDN 664
F A + ++ WD LA++ G + A ++ + LL S+ D
Sbjct: 396 SFSPDGRCIATASFDSSVRLWDGKTGKFLATLR--GHVAAVYQCAWSTDSRLLVSSSQDT 453
Query: 665 GIKI 668
+K+
Sbjct: 454 TLKV 457
Score = 65 (27.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/119 (26%), Positives = 51/119 (42%)
Query: 326 LPVAYTPQSLGQSSYSTDDLPKTVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWE 385
L + YTPQ++ + T T M + G+ + S F P LV G+ LW+
Sbjct: 108 LTLLYTPQAVFRVRAVTRC---TASMNGHDGTII-SAQFSPSTSSRLVTGSGDFTARLWD 163
Query: 386 VGSRERIA-VKSFKVWELGACSMPLQASLSSDYTASVNRVM--WSPD-GTLFGVAYSKH 440
++ IA +K W P AS+ + T S++ + W P G+ G A +H
Sbjct: 164 CDTQTPIATMKGHTNWVSCVAWAP-DASIIA--TGSMDNTIRFWDPKKGSPIGDALRRH 219
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 114 (45.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 471 FSYPNKQLSVVTCGEDRVIKVWDAVTGTK----QY----IFEGHESPVYSICPHHKENIQ 522
FS P+ Q + + D I+VWD ++G QY F H+ PV +C + +
Sbjct: 221 FS-PDGQF-LASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPV--LCIDFSRDSE 276
Query: 523 FIFSTATDGKIKAWLYDNLGSRVD-YDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVE 581
+ S + DGKIK W G + +DA T +++S DG++L S ++ + ++
Sbjct: 277 MLASGSQDGKIKIWRI-RTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLK 335
Query: 582 WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
G + + + G V F + +R + A + +K WD + L
Sbjct: 336 ----SGKLLKEFRG-HTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCL 382
Score = 80 (33.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 41/184 (22%), Positives = 79/184 (42%)
Query: 5 SRELVFLILQFLDEEKFKETVHKLEQDSGFFFN-MRYFEDMVTNGEWDEVEKYLSGFTKV 63
+R+++ ++LQF E +T L+ + N + E +++ + L +++
Sbjct: 7 ARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVLPQVSQL 66
Query: 64 DDNRYSMKIFFEIRKQKYLEALDKR--DRAKAVEILVKDLKVFSAFNEDLFKEITQLLTL 121
R ++ +E Q LE ++ R D A+A+ + + V + + + LL
Sbjct: 67 KLPRNKLEDLYE---QIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHLLVR 123
Query: 122 ENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNW 181
F +E YGD+ R A++ + + A + + SRL LI Q+L W
Sbjct: 124 SYFDPHEA---YGDSTKER--KRAQIAQAVAA--------EVTVVPPSRLMALIGQALKW 170
Query: 182 Q-HQ 184
Q HQ
Sbjct: 171 QQHQ 174
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 111 (44.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 402 LGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEA 461
L A +M LQ YT+ +S DG+ A + L+ G E N ++
Sbjct: 25 LMAPTMVLQGHGGEIYTSQ-----FSSDGSFLASAGYDQQIFLWNVFG--ECENFAVLKG 77
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H G++ ++ F+ + L V+ G D+ ++VWD TG+ F+ H V S+ ++
Sbjct: 78 HKGAIMEVKFNADSSHL--VSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSV-DVNRRGP 134
Query: 522 QFIFSTATDGKI 533
Q I S + DG +
Sbjct: 135 QMICSASDDGTV 146
Score = 77 (32.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P+DN I A G D + ++N + KL GH + A T +L+S+G+D + +
Sbjct: 265 PRDNYITA-GSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Query: 954 WSTD 957
D
Sbjct: 324 GELD 327
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 134 (52.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ V + D+ IK+WD TG
Sbjct: 353 LFLWSPAEDKKPLARMTGHQALINQVLFS-PDSRI-VASASFDKSIKLWDGRTGKYLASL 410
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH + VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 411 RGHVAAVYQIA--WSADSRLLVSGSSDSTLKVW--DVKAQKLATDLPGHADEVYAVDWSP 466
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 467 DGQRVASGGKDK 478
Score = 110 (43.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 60/277 (21%), Positives = 110/277 (39%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS--YPNKQLS-V 480
+ WSPDG V L+ G ++ L H + L++ + N + V
Sbjct: 162 ISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLT--GHSKWITGLSWEPLHMNPECRYV 219
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYD 539
+ +D ++VWD G + I GH V C + ++S + D IK W +D
Sbjct: 220 ASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAHD 276
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ R GH MA S D A G + E+ V + +G++K R
Sbjct: 277 GVLCRT-LQGHGHWVNTMALSTDYA--LRTGAFEPAEA-TVNAQDLQGSLKELKERASSR 332
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD-MDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
+V+ + R ++ D+F + W ++ LA + L + F+ + ++A
Sbjct: 333 -YNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQ--VLFSPDSRIVA 388
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
++ D IK+ G + L ++ ++A +A
Sbjct: 389 SASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSA 424
Score = 94 (38.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 46/189 (24%), Positives = 81/189 (42%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC--PH 516
+E H +V +AFS K L+ + D ++ WD T T + +GH V SI P
Sbjct: 110 LEGHSEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL-----FSCGT 571
K+ + S +G++ W + G +V GHS + S + + + +
Sbjct: 168 GKK----LASGCKNGQVLLW-DPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
+K+G S V W+ + G +R G +SV +++ + A+ D IK W +
Sbjct: 223 SKDG-SVRV-WDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDR-TIKVWRAHDGV 278
Query: 632 LLASIDADG 640
L ++ G
Sbjct: 279 LCRTLQGHG 287
Score = 91 (37.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ I+A D SI++++ R + L+GH + +A+S +LVS +DS L VW
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 83 (34.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++V+ ++ T L GH + + +S + S G D L +W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 45 (20.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 372 LVVGTNMGDVMLWEVGSRERIA--VKSFKVWELGACSMPLQASLSSDYTASVNR 423
L G G V+LW+ + ++ + W G PL + Y AS ++
Sbjct: 171 LASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSK 224
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 105 (42.0 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 61/302 (20%), Positives = 120/302 (39%)
Query: 474 PNKQ-LSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGK 532
P+KQ L + T D ++ W ++ + +IF+GH + V + + + + + + + D
Sbjct: 907 PSKQHLILATSSGD--VQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDAT 964
Query: 533 IKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVK-R 591
+ W + L R + H++ + +A GA ++ E S + + + G ++ R
Sbjct: 965 VLVW-HVGLRERRAHIKNAHTAPITGVAA-GANNTLIISSSEDASIAIT-DLASGKLRHR 1021
Query: 592 TYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFN 651
H G S G+V + ++ G + I WD+DN LL ++ + I +N
Sbjct: 1022 ITHHRGPVS-GIVVAGAC-DVLISGGLDRTICVWDLDNFTLLNTMQMTSAVLRID-ISWN 1078
Query: 652 KEGILLAVSTNDNGIKILANADGIRLLRTVES--RTFDASRVASAAIVKAPAIGT--FGS 707
+L N ++ LA + L+ +S R+ + + +V +
Sbjct: 1079 SVFLLALCEDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQRCVVGCDDTRALIYDM 1138
Query: 708 ANANVGTSLGERTAPAAAMVGMSNDSRNFTDVKPKIADEAVEKSRIWKLTEITEPSQCRS 767
+ SL P A+ M ND T KI + ++ P + RS
Sbjct: 1139 HAGKLVRSLPPNPGPVTAVHAMDNDDFLVTVGGNKITFYSFRNEELYVNPYSRHPRRKRS 1198
Query: 768 LR 769
L+
Sbjct: 1199 LK 1200
Score = 102 (41.0 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 427 SPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGED 486
S D +A +H VHL + + +E H V+ L F+ PN + + T ED
Sbjct: 1222 SRDSQQMAIASGRH-VHLMRINTPEY---QCTLEGHTAGVSCLKFA-PNGEF-LATGSED 1275
Query: 487 RVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD--NLGSR 544
R++ +W+ G F+GH +PV + ++++ I ST D + W+ NL
Sbjct: 1276 RLVHIWNLALGEICNSFKGHTAPVVKVVVL-MDSLRVI-STDRDSMLLVWMAHSGNLLQT 1333
Query: 545 VD--YDAPGHSSTM-MAYSADGARLFSCGT-NKEGESYLVEWNE 584
+ Y + ++ M A S +G + +E E Y V ++
Sbjct: 1334 IQGPYKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYSVSHSD 1377
Score = 97 (39.2 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 27/110 (24%), Positives = 45/110 (40%)
Query: 846 VPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGME 905
+ CF LS++ + ASG + L P + +A G E
Sbjct: 1216 ITCFDLSRDSQQMAIASGRHVHLMRINTPEYQCTLEGHTAGVSCLKFAP-NGEFLATGSE 1274
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLA-FSNTLNVLVSSGADSQLCVW 954
D + I+N+ + E+ KGH + + ++L V +S+ DS L VW
Sbjct: 1275 DRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRV-ISTDRDSMLLVW 1323
Score = 76 (31.8 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 32/167 (19%), Positives = 61/167 (36%)
Query: 844 DAVPCFALSKNDSYVMSASGG-KISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
D + CF +S + +++S S + ++ + +
Sbjct: 1377 DEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLS 1436
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G +D ++ ++++ E L GH + G+ S + VS D L VW T
Sbjct: 1437 GSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWETKRGLAL 1496
Query: 963 ASKFLTIPNGRTASALADTRVQFHL-DQTHL--LAVHETQIAIYEAP 1006
S + +P +L +RV L D +L + +H T + P
Sbjct: 1497 TSLQMHVPFTHFDISLEVSRVLVQLVDSYNLPVICLHNTPAQYVKLP 1543
Score = 54 (24.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 345 LPKTV-VMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGS 388
LP + MT++ ++++ P +Q L ++ T+ GDV W + S
Sbjct: 885 LPSQIRTMTVSGTGCIRAVWLAPSKQHL-ILATSSGDVQQWHIMS 928
Score = 54 (24.1 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 371 LLVVGTNMGDVMLWEVGSRERIA 393
LL+ G+ V++W VG RER A
Sbjct: 955 LLLTGSEDATVLVWHVGLRERRA 977
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 132 (51.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+VT +D +KVW G Y GH V++ + ++I S +TD +K W
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWT--SQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GS + + GH+ST+ + G+ L + G+ ++ L W+ G T HG
Sbjct: 327 D-GSLL-HTLQGHTSTVRCMAMAGSILVT-GSR---DTTLRVWDVESGRHLATLHG-HHA 379
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAV 659
+V VQFD T ++ G +F +K W+ + ++ S + F E ++
Sbjct: 380 AVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS--LLFESERSIVCS 435
Query: 660 STNDNGIKI 668
+ D I++
Sbjct: 436 GSLDTSIRV 444
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 48/191 (25%), Positives = 82/191 (42%)
Query: 479 SVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLY 538
+VV+ G D +K+W+A TG GH + VYS+ + +I + S + D I+ W +
Sbjct: 390 TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI--VCSGSLDTSIRVWDF 447
Query: 539 DNL-GSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLG 597
G GH+S G L SC +S++ W+ EG G
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGNILVSCNA----DSHVRVWDIHEGTCVHMLSG-H 502
Query: 598 KRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS-IDADGGLQASPCI-RFNKEGI 655
+ ++ +Q+ +N + D+ +K WD++ L+ + D G CI R
Sbjct: 503 RSAITSLQW-FGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGG-CIWRLCSTST 560
Query: 656 LLA--VSTNDN 664
+LA V + +N
Sbjct: 561 MLACAVGSRNN 571
Score = 62 (26.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 898 NIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
NI+ DS ++++++ L GH+ IT L + N++ +S D + +W +
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIE 532
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 132 (51.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+VT +D +KVW G Y GH V++ + ++I S +TD +K W
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWT--SQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ GS + + GH+ST+ + G+ L + G+ ++ L W+ G T HG
Sbjct: 327 D-GSLL-HTLQGHTSTVRCMAMAGSILVT-GSR---DTTLRVWDVESGRHLATLHG-HHA 379
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAV 659
+V VQFD T ++ G +F +K W+ + ++ S + F E ++
Sbjct: 380 AVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS--LLFESERSIVCS 435
Query: 660 STNDNGIKI 668
+ D I++
Sbjct: 436 GSLDTSIRV 444
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 48/191 (25%), Positives = 82/191 (42%)
Query: 479 SVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLY 538
+VV+ G D +K+W+A TG GH + VYS+ + +I + S + D I+ W +
Sbjct: 390 TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI--VCSGSLDTSIRVWDF 447
Query: 539 DNL-GSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLG 597
G GH+S G L SC +S++ W+ EG G
Sbjct: 448 TRPEGQECVALLQGHTSLTSGMQLRGNILVSCNA----DSHVRVWDIHEGTCVHMLSG-H 502
Query: 598 KRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS-IDADGGLQASPCI-RFNKEGI 655
+ ++ +Q+ +N + D+ +K WD++ L+ + D G CI R
Sbjct: 503 RSAITSLQW-FGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGG-CIWRLCSTST 560
Query: 656 LLA--VSTNDN 664
+LA V + +N
Sbjct: 561 MLACAVGSRNN 571
Score = 62 (26.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 898 NIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
NI+ DS ++++++ L GH+ IT L + N++ +S D + +W +
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGR-NMVATSSDDGTVKLWDIE 532
>WB|WBGene00010685 [details] [associations]
symbol:aipl-1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IGI] [GO:0032880 "regulation of
protein localization" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0032880
GeneTree:ENSGT00390000009416 HOGENOM:HOG000162559 OMA:LKDQKKC
HSSP:Q11176 EMBL:Z81099 PIR:T23497 RefSeq:NP_506733.1
ProteinModelPortal:O17939 SMR:O17939 STRING:O17939 PaxDb:O17939
EnsemblMetazoa:K08F9.2.1 EnsemblMetazoa:K08F9.2.2 GeneID:180022
KEGG:cel:CELE_K08F9.2 UCSC:K08F9.2.1 CTD:180022 WormBase:K08F9.2
InParanoid:O17939 NextBio:907784 Uniprot:O17939
Length = 600
Score = 103 (41.3 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 60/235 (25%), Positives = 102/235 (43%)
Query: 421 VNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIE--AHVGSVNDLAFSYPNKQL 478
V ++ DG+LF S V LY G+++ + + AH GS+ LA+S P+ Q
Sbjct: 193 VQSTRYNNDGSLFASTGSDGTVVLYNGVDGEKVGVLEDAKGVAHTGSIFALAWS-PD-QS 250
Query: 479 SVVTCGEDRVIKVWDAVTGTK--QYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
+ T D+ +K+WD V+ K + I G + + ++ + + + G + +
Sbjct: 251 RIATASADKSVKIWD-VSARKLERTIVMGSKIEDQQLGIVWTKSA--LITVSVSGFLN-F 306
Query: 537 LYDNLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYH 594
L + GS V+ GH+ T ++ S+DG LFS + E ++ W S G R
Sbjct: 307 LNPDDGS-VEKIRQGHNKAITALSKSSDGKFLFSA----DAEGHITTWEISSGTSSRK-- 359
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL-ASIDADG-GLQASPC 647
+ + T+ N GD F + WD D + + S D L + PC
Sbjct: 360 --SPHTTMITGAQTSSN-----GDLFTVG-WD-DQLKITDGSGDTKSFKLPSQPC 405
Score = 79 (32.9 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNV----RVDEVKTKLKGHQKRITGLAFSNT---LNV------L 942
+ +++A+G +D+ + +Y + R++E+K K++ H IT ++FS+ L V +
Sbjct: 447 EKSLVAVGGKDAKVHVYKLNGDGRLEELK-KIE-HSAEITAVSFSDDGEYLAVTDLARKV 504
Query: 943 VSSGADSQLCVWSTDGWEKQASKFLTI---P-NGRTASALADTRV 983
+ + V S + W SK LT+ P N R A+ DT V
Sbjct: 505 IPYSVSTDFSVTSPNSWTFHTSKVLTVAWSPDNQRLATGSIDTSV 549
Score = 57 (25.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 290 TNNSAMDYQTADSEHVLKRSRPFGISDEVNNL-----SVNILPVAYTPQSLGQSSYSTDD 344
T + + T S H+LK + P S V ++ S I V + G + D
Sbjct: 79 TQGNIRIWDTTQSTHILKHTIPV-FSGPVKDIAWDSESKRIAAVGEGKERFGHV-FLLDT 136
Query: 345 LPKTVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWE 385
+T Q + S+DF P + ++ G++ V ++E
Sbjct: 137 TTSNGSLT-GQSRTMNSVDFKPTRPFRIISGSDDNTVAIFE 176
Score = 53 (23.7 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVD-EVKTKLKG-HQKRITGLAFSNTLNVLVSSGADSQLCV 953
DN +A G D+S+ I++++ E +KG H + +VS+G DS +
Sbjct: 536 DNQRLATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRWLDETTVVSAGQDSNIKF 595
Query: 954 WS 955
W+
Sbjct: 596 WN 597
Score = 45 (20.9 bits), Expect = 0.00033, Sum P(4) = 0.00033
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 645 SPCIRFNKEGILLAVSTNDNGIKILA-NADG-IRLLRTVE 682
S C+ F E L+AV D + + N DG + L+ +E
Sbjct: 439 STCVAFCAEKSLVAVGGKDAKVHVYKLNGDGRLEELKKIE 478
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 125 (49.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 43/155 (27%), Positives = 69/155 (44%)
Query: 442 VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY 501
+ ++ G+ L LEI AH + FS +K V TC D+ +K+W++ TG Y
Sbjct: 638 LQVFKAESGERL---LEISAHDDEILCCTFSADDKY--VATCSADKKVKIWNSRTGKCLY 692
Query: 502 IFEGHESPVYSICPHHKENIQFIFSTATDGK-IKAW-LYDNLGSRVDYDAPGHSSTMM-- 557
++E H V + C + Q++ +T +D IK W L D + GH + +
Sbjct: 693 VYEEHTEQV-NCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMF---GHVNAVSHC 748
Query: 558 AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT 592
+S + + SC T +G L WN RT
Sbjct: 749 RFSPNDDYIASCST--DGTVKL--WNVHSANELRT 779
Score = 103 (41.3 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 32/184 (17%), Positives = 81/184 (44%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A +G + H+ + +C
Sbjct: 606 SRLVVRPHRDAVYHACFSRDRQRIA--SCGADKTLQVFKAESGERLLEISAHDDEI--LC 661
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGAR-LFSCGTNK 573
+ +++ + + D K+K W ++ + Y H+ + + R + T
Sbjct: 662 CTFSADDKYVATCSADKKVKIW--NSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCS 719
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ ++Y+ W+ + + T G +V +F + + + +K W++ + N L
Sbjct: 720 D-DTYIKLWDLKDKYCRNTMFG-HVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANEL 777
Query: 634 ASID 637
+I+
Sbjct: 778 RTIE 781
Score = 86 (35.3 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 20/122 (16%), Positives = 50/122 (40%)
Query: 836 DISDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQ 895
D + E V C + S++ ++ + K+ LF+
Sbjct: 790 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCA 849
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
+ ++A+ + SI+++N++ +GH + + FS+ ++ ++S D + +W
Sbjct: 850 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 909
Query: 956 TD 957
T+
Sbjct: 910 TN 911
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D A G E+ +I++ + V T + ++ + F+ L+SS D+ + VW
Sbjct: 973 EDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVW 1032
Query: 955 STDGWEKQASKFL 967
+ W+ FL
Sbjct: 1033 N---WQLNECVFL 1042
Score = 69 (29.3 bits), Expect = 4.4e-06, Sum P(4) = 4.4e-06
Identities = 23/113 (20%), Positives = 47/113 (41%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
++A+ FA +N + + G + ++N P D + +
Sbjct: 1046 KEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSP-DGSRFSS 1104
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QLCVW 954
D + +I++ V +LKGH+ + AFS + N L+++G D + +W
Sbjct: 1105 TSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPS-NKLLATGDDKGDIRIW 1156
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS-TDG 958
D+ IQ++N +++E LKGH++ I AF + L+S D + VW+ T G
Sbjct: 1026 DAVIQVWNWQLNEC-VFLKGHKEAIKDFAFLEN-SKLLSWSFDGTVKVWNITTG 1077
Score = 59 (25.8 bits), Expect = 4.4e-06, Sum P(4) = 4.4e-06
Identities = 42/194 (21%), Positives = 78/194 (40%)
Query: 622 IKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI------KILANADGI 675
I+ W++ +++ +A D G C+ F+ +G L S+ D I K+ ++D +
Sbjct: 863 IELWNIKSLSKVA--DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAV 920
Query: 676 RLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANVGTSLGERTAPAAAMVGMSNDSRN 735
L++ F V AI I N N S+ +T P +++ S +
Sbjct: 921 --LKSELDVVFHNGEVMILAIYNQKHIQLI---NGNTD-SIIMQTEPQESLICCCCLSED 974
Query: 736 FTDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALA 795
K A E I K+ + + S T+++ R +T +++ A
Sbjct: 975 L-----KFAAFGQENGAI-KVLRLLDGRVLTSREA--YRTSVQHCR--FTTDCQTLISSA 1024
Query: 796 SNAVHKLWKWPRNE 809
+AV ++W W NE
Sbjct: 1025 HDAVIQVWNWQLNE 1038
Score = 50 (22.7 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D +++++N+ + + H+ + A S + S+ AD +WS
Sbjct: 1066 DGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWS 1115
Score = 47 (21.6 bits), Expect = 0.00056, Sum P(4) = 0.00056
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDE---------VKTKLKGHQKRITGLAFSNTLNVLVSSG 946
N ++A G + I+I+++ E V + H +T L+FS +LVSSG
Sbjct: 1141 NKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1199
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 337 QSSYSTDDLPKTVVMTLNQGSAVKSMDFHPVQQILLV 373
++SY D + V+TL + VK + + +L+
Sbjct: 21 KTSYIMDHMVADQVLTLQEEEKVKQQNTQKERAAMLI 57
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 125 (49.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 43/155 (27%), Positives = 69/155 (44%)
Query: 442 VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY 501
+ ++ G+ L LEI AH + FS +K V TC D+ +K+W++ TG Y
Sbjct: 639 LQVFKAESGERL---LEISAHDDEILCCTFSADDKY--VATCSADKKVKIWNSRTGKCLY 693
Query: 502 IFEGHESPVYSICPHHKENIQFIFSTATDGK-IKAW-LYDNLGSRVDYDAPGHSSTMM-- 557
++E H V + C + Q++ +T +D IK W L D + GH + +
Sbjct: 694 VYEEHTEQV-NCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMF---GHVNAVSHC 749
Query: 558 AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT 592
+S + + SC T +G L WN RT
Sbjct: 750 RFSPNDDYIASCST--DGTVKL--WNVHSANELRT 780
Score = 103 (41.3 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 32/184 (17%), Positives = 81/184 (44%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A +G + H+ + +C
Sbjct: 607 SRLVVRPHRDAVYHACFSRDRQRIA--SCGADKTLQVFKAESGERLLEISAHDDEI--LC 662
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGAR-LFSCGTNK 573
+ +++ + + D K+K W ++ + Y H+ + + R + T
Sbjct: 663 CTFSADDKYVATCSADKKVKIW--NSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCS 720
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ ++Y+ W+ + + T G +V +F + + + +K W++ + N L
Sbjct: 721 D-DTYIKLWDLKDKYCRNTMFG-HVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANEL 778
Query: 634 ASID 637
+I+
Sbjct: 779 RTIE 782
Score = 86 (35.3 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 20/122 (16%), Positives = 50/122 (40%)
Query: 836 DISDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQ 895
D + E V C + S++ ++ + K+ LF+
Sbjct: 791 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCA 850
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
+ ++A+ + SI+++N++ +GH + + FS+ ++ ++S D + +W
Sbjct: 851 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 910
Query: 956 TD 957
T+
Sbjct: 911 TN 912
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D A G E+ +I++ + V T + ++ + F+ L+SS D+ + VW
Sbjct: 974 EDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVW 1033
Query: 955 STDGWEKQASKFL 967
+ W+ FL
Sbjct: 1034 N---WQLNECVFL 1043
Score = 69 (29.3 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 23/113 (20%), Positives = 47/113 (41%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
++A+ FA +N + + G + ++N P D + +
Sbjct: 1047 KEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSP-DGSRFSS 1105
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QLCVW 954
D + +I++ V +LKGH+ + AFS + N L+++G D + +W
Sbjct: 1106 TSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPS-NKLLATGDDKGDIRIW 1157
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS-TDG 958
D+ IQ++N +++E LKGH++ I AF + L+S D + VW+ T G
Sbjct: 1027 DAVIQVWNWQLNEC-VFLKGHKEAIKDFAFLEN-SKLLSWSFDGTVKVWNITTG 1078
Score = 59 (25.8 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 42/194 (21%), Positives = 78/194 (40%)
Query: 622 IKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI------KILANADGI 675
I+ W++ +++ +A D G C+ F+ +G L S+ D I K+ ++D +
Sbjct: 864 IELWNIKSLSKVA--DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAV 921
Query: 676 RLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANVGTSLGERTAPAAAMVGMSNDSRN 735
L++ F V AI I N N S+ +T P +++ S +
Sbjct: 922 --LKSELDVVFHNGEVMILAIYNQKHIQLI---NGNTD-SIIMQTEPQESLICCCCLSED 975
Query: 736 FTDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALA 795
K A E I K+ + + S T+++ R +T +++ A
Sbjct: 976 L-----KFAAFGQENGAI-KVLRLLDGRVLTSREA--YRTSVQHCR--FTTDCQTLISSA 1025
Query: 796 SNAVHKLWKWPRNE 809
+AV ++W W NE
Sbjct: 1026 HDAVIQVWNWQLNE 1039
Score = 50 (22.7 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D +++++N+ + + H+ + A S + S+ AD +WS
Sbjct: 1067 DGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWS 1116
Score = 47 (21.6 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDE---------VKTKLKGHQKRITGLAFSNTLNVLVSSG 946
N ++A G + I+I+++ E V + H +T L+FS +LVSSG
Sbjct: 1142 NKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1200
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 337 QSSYSTDDLPKTVVMTLNQGSAVKSMDFHPVQQILLV 373
++SY D + V+TL + VK + + +L+
Sbjct: 22 KTSYIMDHMVADQVLTLQEEEKVKQQNTQKERAAMLI 58
>UNIPROTKB|Q9NSI6 [details] [associations]
symbol:BRWD1 "Bromodomain and WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AJ238214 EMBL:AJ292465 EMBL:AJ292466
EMBL:AB080586 EMBL:AB080587 EMBL:AF064861 EMBL:AF129408
EMBL:BC064602 EMBL:AL163279 EMBL:AJ222636 EMBL:AK002177
IPI:IPI00250716 IPI:IPI00289944 IPI:IPI00746752
RefSeq:NP_001007247.1 RefSeq:NP_061836.2 RefSeq:NP_387505.1
UniGene:Hs.627139 UniGene:Hs.654740 PDB:3Q2E PDBsum:3Q2E
ProteinModelPortal:Q9NSI6 SMR:Q9NSI6 IntAct:Q9NSI6 STRING:Q9NSI6
DMDM:97535778 PaxDb:Q9NSI6 PRIDE:Q9NSI6 Ensembl:ENST00000333229
Ensembl:ENST00000341322 Ensembl:ENST00000342449
Ensembl:ENST00000380800 GeneID:54014 KEGG:hsa:54014 UCSC:uc002yxk.2
UCSC:uc021wjf.1 CTD:54014 GeneCards:GC21M040556 HGNC:HGNC:12760
HPA:HPA030945 neXtProt:NX_Q9NSI6 PharmGKB:PA134906879
HOVERGEN:HBG080933 InParanoid:Q9NSI6 KO:K11798 OMA:NDNGERS
OrthoDB:EOG470TGD PhylomeDB:Q9NSI6 ChiTaRS:BRWD1
EvolutionaryTrace:Q9NSI6 GenomeRNAi:54014 NextBio:56274
ArrayExpress:Q9NSI6 Bgee:Q9NSI6 CleanEx:HS_BRWD1
Genevestigator:Q9NSI6 GermOnline:ENSG00000185658 Uniprot:Q9NSI6
Length = 2320
Score = 139 (54.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 54/246 (21%), Positives = 101/246 (41%)
Query: 441 IVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQ 500
+V +++ H G L + H ++D+A +Y N ++ +C D++I+VW T
Sbjct: 209 LVKIWSTHNGRLLST---LRGHSAEISDMAVNYENTMIAAGSC--DKIIRVWCLRTCAPV 263
Query: 501 YIFEGHESPVYSI--CPHHKENIQFIFSTATDGKIKAWLYD----NLGSR----VDYDAP 550
+ +GH + S+ P K + +++ ST DG + W +D R + P
Sbjct: 264 AVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRP 323
Query: 551 GHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTK 610
G ++S G L + T+ Y + + E + H V +QF
Sbjct: 324 GVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESH---TDKVDSIQFCNNG 380
Query: 611 NRFLAAGDEFMIKFWDMDNVN----LLASIDADGGLQASPCIRFNKEGI-LLAVSTNDNG 665
+RFL+ + + W + + LL G +S RF K + ++A + ND+
Sbjct: 381 DRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSI 440
Query: 666 IKILAN 671
+ N
Sbjct: 441 VVTAVN 446
Score = 68 (29.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGL-AFSNTLNVLVSSGADSQLCV 953
Q+++I+ + D ++++N ++ L GH + L +++S+G D + +
Sbjct: 436 QNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFI 495
Query: 954 WSTDGWEKQASKFLTIPNGRTASALADTRVQFHLDQTH 991
W K F I G+ A+ D + F D H
Sbjct: 496 WDITKGTKMKHYFNMI-EGQGHGAVFDCK--FSQDGQH 530
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 143 (55.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 60/253 (23%), Positives = 105/253 (41%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
S + V + P F ++ ++ G +L+ L + HV +V +A S
Sbjct: 169 SGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASG-KLK--LSLTGHVSTVRGVAVS-- 223
Query: 475 NKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIK 534
K + +CGEDR +K WD + GH S VYS+ H I + ++ D +
Sbjct: 224 TKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALH--PTIDVLATSGRDSTAR 281
Query: 535 AWLYDNLGSRVD-YDAPGHSSTMMAYSADGAR-LFSCGTNKEGESYLVEWNESEGAVKRT 592
W ++ ++ + + GH++T+ + A G++ +S + W+ + G T
Sbjct: 282 IW---DMRTKANVHTLTGHTNTVASVVAQATNPQIITGSH---DSTVRLWDLAAGKSVCT 335
Query: 593 YHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNK 652
K+SV + + F +A + IK W + +I G C+ N
Sbjct: 336 LTN-HKKSVRSIVLHPSLYMFASASPD-NIKQWRCPEGKFVQNIS--GHTSIVNCMAANS 391
Query: 653 EGILLAVSTNDNG 665
EG+L VS DNG
Sbjct: 392 EGVL--VSGGDNG 402
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 145 (56.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 44/185 (23%), Positives = 80/185 (43%)
Query: 451 DELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPV 510
D+ R + H ++D+A +Y N ++ +C D++I+VW T + +GH + +
Sbjct: 150 DDGRLLATLRGHAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASI 207
Query: 511 YSI--CPHHKENIQFIFSTATDGKIKAWLYD----NLGSR----VDYDAPGHSSTMMAYS 560
S+ P + +++ ST DG I WL+D + R + PG ++S
Sbjct: 208 TSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFS 267
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEF 620
A G L + T+ Y + E + +H V +QF T NRF++ +
Sbjct: 268 AGGMFLATGSTDHIIRVYFFGSGQPEKISELEFH---TDKVDSIQFSNTSNRFVSGSRDG 324
Query: 621 MIKFW 625
+ W
Sbjct: 325 TARIW 329
Score = 59 (25.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 22/88 (25%), Positives = 39/88 (44%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA-FSNTLNVLVSSGADSQLCVW 954
DN +I + + +++++N ++ L GH+ + L VL S+G D + VW
Sbjct: 373 DNTVIT-AVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVW 431
Query: 955 STDGWEKQASKFLTIPNGRTASALADTR 982
K S F I G+ A+ D +
Sbjct: 432 DLARGVKIRSYFNMI-EGQGHGAVFDCK 458
Score = 55 (24.4 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 750 KSRIWK---LTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLW 803
K R WK L T P+ + D +T M+V+ + + ++ +N K+W
Sbjct: 332 KRREWKSILLDMATRPAGQNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVW 388
Score = 39 (18.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 807 RNERNSTGKATTNQAPQLWQPP 828
R+ N T QAP L PP
Sbjct: 504 RDANNFVLDEQTQQAPHLMPPP 525
Score = 37 (18.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 21/138 (15%), Positives = 55/138 (39%)
Query: 778 RVSRLIYTNSGLAILALASNAVHKLWKWPRNERNSTGKATTNQAPQLWQPPSGILMTNDI 837
+V + ++N+ ++ + + ++W++ R E S + A + P+G + I
Sbjct: 304 KVDSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSI---LLDMATR----PAGQNLQG-I 355
Query: 838 SDTNPEDAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQD 896
D + V A ++D+ V++A + ++N HP D
Sbjct: 356 EDKITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFD 415
Query: 897 NNIIAIGMEDSSIQIYNV 914
++ D ++ ++++
Sbjct: 416 PRVLFSAGHDGNVIVWDL 433
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 140 (54.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 43/183 (23%), Positives = 80/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNPHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H ++I + S + D IK + + + + D A H+ST+ + ADG RL
Sbjct: 152 KRVVWHPTKDI--LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 140 (54.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 44/183 (24%), Positives = 79/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNPHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + + + S + D IK + D L S D A H+ST+ + + A G RL
Sbjct: 152 KRVVWHPTKEL--LASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDFDATGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 119 (46.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 46/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ I S + D IK W D+
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--IVSASEDATIKVW--DHETG 140
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 141 DFERTLKGHTDSVQDISFDHTGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A S+
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFT--GHREWVRMVRPNQDGTLIASSS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 101 (40.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 32/146 (21%), Positives = 60/146 (41%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+V+ ED IKVWD TG + +GH V I H + + S + D IK W +
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKL--LASCSADMTIKLWDFQ 180
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
H+ + +A +G + S +K + W + G +T+ G +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT----IKMWEVATGYCVKTFTG-HRE 235
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFW 625
V +V+ + ++ ++ ++ W
Sbjct: 236 WVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 70 (29.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP I++ +D +++I++ + L H+ +T L F T +V+ D +
Sbjct: 347 HPGGKYIVSCA-DDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Query: 953 VW 954
VW
Sbjct: 406 VW 407
Score = 60 (26.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V + L GH + G+ +VS D L +W D K+
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW--DYKNKR 371
Query: 963 ASKFLT 968
+K L+
Sbjct: 372 CTKTLS 377
Score = 58 (25.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 13/59 (22%), Positives = 33/59 (55%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAF---SNTLNVLVSSGADSQ 950
QD +IA D +++++ V E K +L+ H+ + +++ S +L ++G++++
Sbjct: 244 QDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 133 (51.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ + + D+ IK+WD TG
Sbjct: 353 LFLWSPAEDKKPLARMTGHQALINQVLFS-PDSRI-IASASFDKSIKLWDGRTGKYLASL 410
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH + VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 411 RGHVAAVYQIA--WSADSRLLVSGSSDSTLKVW--DVKAQKLAADLPGHADEVYAVDWSP 466
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 467 DGQRVASGGKDK 478
Score = 101 (40.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 58/277 (20%), Positives = 108/277 (38%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS--YPNKQLS-V 480
+ WSPDG + L+ G ++ L H + L++ + N + V
Sbjct: 162 ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALA--GHSKWITALSWEPLHANPECRYV 219
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYD 539
+ +D ++VWD G + I GH V C + ++S + D IK W +D
Sbjct: 220 ASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAHD 276
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ R GH MA S D A G + E+ V + G+++ R
Sbjct: 277 GVLCRT-LQGHGHWVNTMALSTDYA--LRTGAFEPAEAS-VNAQDLRGSLQELKERALSR 332
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD-MDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
+V+ R ++ D+F + W ++ LA + L + F+ + ++A
Sbjct: 333 -YNLVR-GRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQ--VLFSPDSRIIA 388
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
++ D IK+ G + L ++ ++A +A
Sbjct: 389 SASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSA 424
Score = 100 (40.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 49/189 (25%), Positives = 82/189 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC--PH 516
+E H +V +AFS K L+ + D ++ WD T T + +GH V SI P
Sbjct: 110 LEGHSEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 167
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYS-----ADGARLFSCGT 571
K+ + S +G+I W + G +V GHS + A S A+ + +
Sbjct: 168 GKK----LASGCKNGQILLW-DPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASS 222
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
+K+G S V W+ + G +R G +SV +++ + A+ D IK W +
Sbjct: 223 SKDG-SVRV-WDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDR-TIKVWRAHDGV 278
Query: 632 LLASIDADG 640
L ++ G
Sbjct: 279 LCRTLQGHG 287
Score = 92 (37.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ IIA D SI++++ R + L+GH + +A+S +LVS +DS L VW
Sbjct: 383 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 78 (32.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++V+ ++ L GH + + +S + S G D L +W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 53 (23.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 313 GISDEVNNLSVNILPVA-YTPQSLGQSSYSTDDLPKTVVMTLNQGSA--VKSMDFHPVQQ 369
G S+ V +SV P Y G ++ DL QG V S+ + P +
Sbjct: 112 GHSEAV--ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 370 ILLVVGTNMGDVMLWEVGSRERI--AVKSFKVWELGACSMPLQASLSSDYTASVNR 423
L G G ++LW+ + +++ A+ W PL A+ Y AS ++
Sbjct: 170 -KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSK 224
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 106 (42.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 408 PLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVN 467
P + SL+ + AS+ RV++ P L A + ++ + G+ R+ ++ H SV
Sbjct: 99 PEKFSLTG-HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERS---LKGHTDSVQ 154
Query: 468 DLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY-IFEGHESPVYSICPHHKENIQFIFS 526
D+AF K L+ +C D IK+WD + GH+ V S+ ++ S
Sbjct: 155 DVAFDAQGKLLA--SCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVA--FVPAGDYVLS 210
Query: 527 TATDGKIKAW 536
+ D IK W
Sbjct: 211 ASRDRTIKMW 220
Score = 93 (37.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 37/171 (21%), Positives = 73/171 (42%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+ H S+ + F +P L +V+ ED I++WD TG + +GH V + +
Sbjct: 104 LTGHRASITRVIF-HPIFAL-MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQ 161
Query: 519 ENIQFIFSTATDGKIKAW----LYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKE 574
+ + S + D IK W Y+ + + +D H+ + +A+ G + S ++
Sbjct: 162 GKL--LASCSADLSIKLWDFQQSYECIKTMHGHD---HNVSSVAFVPAGDYVLSASRDRT 216
Query: 575 GESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFW 625
+ W + G +TY G + V +V+ + F ++ I+ W
Sbjct: 217 ----IKMWEVATGYCVKTYTG-HREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 83 (34.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+A G D +I+I++V V L GH + GLAF LVS+ D + VW
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 64 (27.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP +++ +D +I+++++R L HQ T + F ++S D +
Sbjct: 348 HPGGKYLVSAS-DDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVK 406
Query: 953 VW 954
VW
Sbjct: 407 VW 408
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 120 (47.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 64/307 (20%), Positives = 125/307 (40%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
++ ++W++ +PL S + + V + WSPD T A + ++ G+++
Sbjct: 127 QTMRIWDI-ELELPLHTCKS--HKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIG 183
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLS---VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVY 511
L+ H + LA+ +K + + +CG+D I +WD V GT GH + V
Sbjct: 184 KTLK--RHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVT 241
Query: 512 SICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGT 571
+ E + I+S + D +K W D+ + H +A + D A SC
Sbjct: 242 CL-RWGGEGL--IYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFE 298
Query: 572 NKEG--ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDN 629
+ + VE E + + Y + + G R ++ D+F + W+
Sbjct: 299 PSKRCIKPDTVE--ECQKVAQTRYEAALEIAGG--------ERLVSGSDDFTLFMWNPKE 348
Query: 630 VNLLASIDA-DGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDA 688
SI+ G +Q + F+ + +A ++ D +K+ G + L ++
Sbjct: 349 TK--QSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTG-KYLASLRGHVGPV 405
Query: 689 SRVASAA 695
+VA +A
Sbjct: 406 YQVAWSA 412
Score = 70 (29.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS+++++ ++ + L GH + + +S +VS G D L +W
Sbjct: 413 DSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNPHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H +++ + S + D IK + + + + D A H+ST+ + ADG RL
Sbjct: 152 KRVVWHPTKDV--LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 130 (50.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 60/263 (22%), Positives = 113/263 (42%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + + ++ G++L LEI+AH V AFS ++
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDR 670
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFST-ATDGKIKA 535
+ TC D+ +K+W+++TG + ++ H V + C + + +T ++D +K
Sbjct: 671 --FIATCSVDKKVKIWNSMTGELVHTYDEHSEQV-NCCHFTNSSHHLLLATGSSDCFLKL 727
Query: 536 WLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSC---GTNKEGESYLVEWNESEGA-VKR 591
W + R +S +S D L SC GT K ++ NE + VK+
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDA--TSANERKSINVKQ 785
Query: 592 TYHGLG--KRSVGVV----QFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQAS 645
+ L + + V+ + R + A I W+ D+ + +A D G L
Sbjct: 786 FFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKN-KIFLWNTDSRSKVA--DCRGHLSWV 842
Query: 646 PCIRFNKEGILLAVSTNDNGIKI 668
+ F+ +G S++D I++
Sbjct: 843 HGVMFSPDGSSFLTSSDDQTIRL 865
Score = 129 (50.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 48/232 (20%), Positives = 97/232 (41%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 607 SRLVVRPHTDAVYHACFSEDGQRIA--SCGADKTLQVFKAETGEKLLEIKAHEDEV--LC 662
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM-MAYSADGARLFSCGTNK 573
+ +FI + + D K+K W +++ + + HS + + + + T
Sbjct: 663 CAFSTDDRFIATCSVDKKVKIW--NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGS 720
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ +L W+ ++ + T G SV +F + + +K WD + N
Sbjct: 721 S-DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANER 778
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRT 685
SI+ + + E I+ S + +G +I+ A L +SR+
Sbjct: 779 KSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRS 830
Score = 69 (29.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
IA G E+ +I+I + + + H+K + + F+ L+SS D+++ VW+ W
Sbjct: 933 IAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWN---W 989
Query: 960 EKQASKFL 967
+ FL
Sbjct: 990 QLDKCIFL 997
Score = 59 (25.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D + +D+ IQ++N ++D+ L+GHQ+ + +L S D + VW+
Sbjct: 971 DEKTLISSSDDAEIQVWNWQLDKC-IFLRGHQETVKDFRLLKNSRLL-SWSFDGTVKVWN 1028
Score = 49 (22.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWE 960
D +++++N+ + HQ + S+ S+ AD +W+ E
Sbjct: 1021 DGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGE 1075
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 139 (54.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 51/212 (24%), Positives = 92/212 (43%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI-FEGHESPVYSICPHH 517
+ H G V F +PN ++ + G DR+I +W Y +GH V + H+
Sbjct: 63 LSGHEGEVYCCKF-HPNGS-TLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMEL--HY 118
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA-YSADGARLFSCGTNKEGE 576
+ +FS +TD + W + G RV GH+S + + Y A C + +G
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSET-GERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
L W+ + A +T+ + V V F+ T ++ ++ G + IK WD+ L ++
Sbjct: 177 VKL--WDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
G + + + EG L + DN +++
Sbjct: 233 R--GHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 36/134 (26%), Positives = 64/134 (47%)
Query: 405 CSMPLQAS--LSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
CS LQA L S + V + P+G+ A ++ L++ +G + N+ ++ H
Sbjct: 53 CSS-LQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYG--DCDNYATLKGH 109
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
G+V +L ++ L + D+ + VWD+ TG + +GH S V S P + Q
Sbjct: 110 SGAVMELHYNTDGSML--FSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQ 166
Query: 523 FIFSTATDGKIKAW 536
+ + + DG +K W
Sbjct: 167 LVCTGSDDGTVKLW 180
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 143 (55.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 452 ELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVY 511
+LR+ L + H + L S K+ +V + I+VWD GH++ +
Sbjct: 52 QLRHDL-LTGHTTPIESLQISA--KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 108
Query: 512 SICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGT 571
S+ H + F+ S + D IK W G Y + + + +S DG L S
Sbjct: 109 SLDFHPYGS--FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA- 165
Query: 572 NKEGESYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFM-IKFWDMDN 629
+ + V+ W+ + G V + G V VV+F + LA+G M I+FWD++
Sbjct: 166 ----DDHTVKLWDLTAGKVMFEFTG-HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 220
Query: 630 VNLLASIDADGGLQASP--CIRFNKEGILL 657
++++ I+ + A+P CI FN +G L
Sbjct: 221 FHVVSCIEEE----ATPVRCILFNPDGCCL 246
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 130 (50.8 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 52/182 (28%), Positives = 84/182 (46%)
Query: 466 VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIF 525
V +AFS K L VT EDR IK+WD T +Y+F GHE +YS+ H N +FI
Sbjct: 363 VRTIAFSPDGKYL--VTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSH--NGRFIV 418
Query: 526 STATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNES 585
S + D + W + G + + T +A S + + + G+ + + W+ S
Sbjct: 419 SGSGDRTARLWDVET-GQCILKLEIENGVTAIAISPND-QFIAVGSL---DQIIRVWSVS 473
Query: 586 EGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL--LASIDADGGLQ 643
V+R G K SV + F + L+ + IK W++ L++I +G +
Sbjct: 474 GTLVERL-EG-HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICK 531
Query: 644 AS 645
A+
Sbjct: 532 AT 533
Score = 67 (28.6 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
G +D S+Q ++++ + +GH+ + + FS S D + +WS D
Sbjct: 556 GSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSID 610
Score = 38 (18.4 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 214 SPVTNPLMGAVPKAGAFPPLSAHGPFQPTPAALPTS 249
+P P M A AG+ G +Q P S
Sbjct: 242 TPSAEPSMTASANAGSISQAGPDGEYQGREQIAPVS 277
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 138 (53.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ V WSP G A +++ H E
Sbjct: 36 KAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKH---ECT 92
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
LE H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 93 ATLE--GHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNAHSQDV 147
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + I + S + D IK + L S D A H+ST+ + + ADG RL
Sbjct: 148 KRVVWHPTKEI--LASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDADGERL 205
Query: 567 FSC 569
SC
Sbjct: 206 VSC 208
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 108 (43.1 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 33/136 (24%), Positives = 73/136 (53%)
Query: 7 ELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYLSGFTKV 63
E++ L+LQFL++ + E++ LE+++G +++ + V G+W E S ++
Sbjct: 10 EVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAEAAFS-IMQL 68
Query: 64 DDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLTLEN 123
D + F ++KQ+ LE +A+ +L ++ + + FN++ + ++ +L N
Sbjct: 69 RDESKRKEAQFLLQKQRCLELARSGAICEAIYVL-QNFES-TDFNKEKERLVSIILESNN 126
Query: 124 FRDNEQLSK--YGDTK 137
+NE ++K YG+T+
Sbjct: 127 KSNNELITKNGYGNTR 142
Score = 88 (36.0 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 60/266 (22%), Positives = 113/266 (42%)
Query: 420 SVNRVMWSPDGT-LFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQL 478
+V + WSPD L + K ++ L+ G++LR++ H SV+ + P+ L
Sbjct: 257 TVAYIRWSPDDRYLLSCSCDKSVI-LWDAFTGEKLRDY----KHGFSVSCCCW-LPDG-L 309
Query: 479 SVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFI--FSTATDGKIKAW 536
S +T D I W ++ G + +++ + +Y + +I F + + K
Sbjct: 310 SFITGSPDCHITHW-SLNG--EILYKWEDVNIYDMALTSDGTKLYIVGFEQLINAEDKHI 366
Query: 537 LYDNLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY- 593
++ +R S T + S D TN E + + W+ E + R Y
Sbjct: 367 AIYSVETRECIKKISLQSKVTSICLSKDSKYAL---TNLEPHTTFL-WDLEENRIVRQYM 422
Query: 594 -HGLGKRSVGVVQFDTTKNRFLAAGDEF-MIKFWDMDNVNLLASIDADGGLQASPCIRFN 651
H LG +G F + F+ +G E I+ W ++ LLA++ G ++ + +N
Sbjct: 423 GHKLGNFLIGSC-FGGKDDTFVLSGSEDDKIRIWHRESGKLLATLS--GHVKCVNYVAYN 479
Query: 652 K-EGILLAVSTNDNGIKILANADGIR 676
+ A + +DN ++I +N D R
Sbjct: 480 PVDPYQFASAGDDNTVRIWSNKDNPR 505
Score = 86 (35.3 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 52/246 (21%), Positives = 99/246 (40%)
Query: 453 LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
L+ + H+ +V + +S ++ L ++C D+ + +WDA TG K ++ H V S
Sbjct: 245 LKRVFRLIGHIDTVAYIRWSPDDRYL--LSCSCDKSVILWDAFTGEKLRDYK-HGFSV-S 300
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCG-- 570
C + + FI + + D I W +L + Y + MA ++DG +L+ G
Sbjct: 301 CCCWLPDGLSFI-TGSPDCHITHW---SLNGEILYKWEDVNIYDMALTSDGTKLYIVGFE 356
Query: 571 --TNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMD 628
N E + + E+ +K+ L + + +K L + WD++
Sbjct: 357 QLINAEDKHIAIYSVETRECIKKI--SLQSKVTSICLSKDSKYA-LTNLEPHTTFLWDLE 413
Query: 629 NVNLLASIDAD--GGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTF 686
++ G C + +L+ S +D I+I G +LL T+
Sbjct: 414 ENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDK-IRIWHRESG-KLLATLSGHVK 471
Query: 687 DASRVA 692
+ VA
Sbjct: 472 CVNYVA 477
Score = 71 (30.1 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNV--LVSSGADSQLC 952
+D+ + G ED I+I++ ++ L GH K + +A+ N ++ S+G D+ +
Sbjct: 438 KDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAY-NPVDPYQFASAGDDNTVR 496
Query: 953 VWS 955
+WS
Sbjct: 497 IWS 499
Score = 37 (18.1 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 303 EHVLKRSRPFGISDEV-NNLSVN 324
EH+L++++ + +S +V +N+ N
Sbjct: 165 EHLLQQAKDYQVSSQVYHNVLKN 187
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 135 (52.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H+ V F +PN + T DR +++WD + G IF GH+ P++S+ N
Sbjct: 606 HLADVTCTRF-HPNSNY-IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLA--FSPNG 661
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFS 568
+F+ + ATDG++ W + G V + GH+ T+ A +S DG L S
Sbjct: 662 RFLATGATDGRVLLWDIGH-GLMVG-ELKGHTDTIYALRFSRDGEILAS 708
Score = 59 (25.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 218 NPLMGAVPKAGAFPPLSAHGPFQPTPAALPTSLAGWMANPSPV-PH-PSPSAGP 269
+P G P+ A PP +A P P+ AA AG + S P P P+A P
Sbjct: 17 DPEAGTPPQPPAAPPATAAPP-APSAAAAEGETAGSAGDASSAKPSAPGPAASP 69
Score = 48 (22.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 31/112 (27%), Positives = 43/112 (38%)
Query: 221 MGAVPKAGAF-----PPLSAHGPFQPTPAALPTSLAGWMANPSPVPHPSPSAGPXXXXXX 275
M AVP+ A P A P QP PAA P + A P P P + + G
Sbjct: 1 MAAVPEEPAEVVAVKPDPEAGTPPQP-PAAPPATAA-----P-PAPSAAAAEGETAGSAG 53
Query: 276 XXXXXXXKRPRTPPTNNSAMDYQTADSE-HVLKRSRPFGISDEVNNLSVNIL 326
P P + +A+D QT + L+RS S+E+ +L
Sbjct: 54 DASSAKPSAPG-PAASPAALDRQTLVAVLQFLRRSN-LRESEEILRREARLL 103
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 207 PNGARAPSPVTNPLMGAVPKAGAFPPLSAHGPFQPTPAALPTSL 250
P A P+P G AG+ S+ P P PAA P +L
Sbjct: 31 PATAAPPAPSAAAAEGET--AGSAGDASSAKPSAPGPAASPAAL 72
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 17/90 (18%), Positives = 40/90 (44%)
Query: 54 EKYLSGFTK-----VDDNRYSM-KIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAF 107
E+Y SG +D +R + ++F+ + YLE + + ++A + +
Sbjct: 195 EEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECY 254
Query: 108 NEDLFKEITQLLTLENFRDNEQLSKYGDTK 137
+D + ++ L E+ + NE + + +K
Sbjct: 255 YQDDLRVLSSLTKKEHMKGNETMLDFRTSK 284
Score = 42 (19.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 2 SSLSRELVFLILQFLDEEKFKETVHKLEQDS 32
++L R+ + +LQFL +E+ L +++
Sbjct: 70 AALDRQTLVAVLQFLRRSNLRESEEILRREA 100
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 123 (48.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
+ L + H +V FS ++++ +CG D+ ++V+ A TG K + HE V +C
Sbjct: 607 SRLVVRPHTDAVYHACFSEDGQRIA--SCGADKTLQVFKAETGEKLLEIKAHEDEV--LC 662
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM-MAYSADGARLFSCGTNK 573
+ +FI + + D K+K W +++ + + HS + + + + T
Sbjct: 663 CAFSTDDRFIATCSVDKKVKIW--NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGS 720
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ +L W+ ++ + T G SV +F + + +K WD + N
Sbjct: 721 S-DCFLKLWDLNQKECRNTMFG-HTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANER 778
Query: 634 ASID 637
SI+
Sbjct: 779 KSIN 782
Score = 119 (46.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+T +V +S DG + + ++ G++L LEI+AH V AFS ++
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDR 670
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFST-ATDGKIKA 535
+ TC D+ +K+W+++TG + ++ H V + C + + +T ++D +K
Sbjct: 671 --FIATCSVDKKVKIWNSMTGELVHTYDEHSEQV-NCCHFTNSSHHLLLATGSSDCFLKL 727
Query: 536 WLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
W + R +S +S D L SC +
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSAD 764
Score = 76 (31.8 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 21/114 (18%), Positives = 43/114 (37%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
E V C + S + + +M A+ KI LF+ N++ +
Sbjct: 798 EVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVV 857
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+ ++++N +GH + G+ FS + ++S D + +W T
Sbjct: 858 ALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWET 911
Score = 69 (29.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGW 959
IA G E+ +I+I + + + H+K + + F+ L+SS D+++ VW+ W
Sbjct: 976 IAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWN---W 1032
Query: 960 EKQASKFL 967
+ FL
Sbjct: 1033 QLDKCIFL 1040
Score = 59 (25.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D + +D+ IQ++N ++D+ L+GHQ+ + +L S D + VW+
Sbjct: 1014 DEKTLISSSDDAEIQVWNWQLDKC-IFLRGHQETVKDFRLLKNSRLL-SWSFDGTVKVWN 1071
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ + WSP G A +++ G E
Sbjct: 36 KAIRIWSLTGNTWGTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFE 94
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 95 CNATLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNPHTQDV 151
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H +++ + S + D IK + + + + D A H+ST+ + ADG RL
Sbjct: 152 KRVVWHPTKDV--LASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL 209
Query: 567 FSC 569
SC
Sbjct: 210 VSC 212
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 141 (54.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/209 (22%), Positives = 89/209 (42%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
++ H + + + +PN+ +V+T D I++W T Q + HE PV + H
Sbjct: 261 LKGHTKKITKVIY-HPNED-TVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPT 318
Query: 519 ENIQFIFSTATDGKIKAWLYDNL--GSRVD--YDAPGHSSTMMAYSADGARLFSCGTNKE 574
+ ++ ST++D K W + ++ G + D T + DG +F GT
Sbjct: 319 GD--YLLSTSSD---KHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGL-IFGTGTV-- 370
Query: 575 GESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLA 634
+S + W+ E + + G + + F A D+ +K WD+ +
Sbjct: 371 -DSQVKIWDLKEQSNVANFPG-HTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFK 428
Query: 635 SIDADGGLQASPCIRFNKEGILLAVSTND 663
+I D G + + F++ G LA++ +D
Sbjct: 429 TIQLDDGYEVKD-LCFDQSGTYLAIAGSD 456
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 99 (39.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 470 AFSYPNKQLSVVTCGEDRVIKVW----DAVTGTKQYIFEGHESPVYSICPHHKENIQFIF 525
+ S+ +K +++ GEDRVIK+W D + G+ + E H+ + C +I
Sbjct: 19 SLSWNHKGSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIR--CVTWSPCGTYIA 76
Query: 526 STATDGKIKAWLYDNLGSRVDYDA----PGHSSTM--MAYSADGARLFSCGTNKEGESYL 579
S + DG + W S + +A GH+S + +A+ G + +CG +K +L
Sbjct: 77 SASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKS--VWL 134
Query: 580 VEWNESE 586
E+++ E
Sbjct: 135 WEFDDEE 141
Score = 87 (35.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDE--VKTKLKGHQKRITGLAFSNTLNVLVSSGADSQ 950
HP +++ D+ I +Y +D+ V +L GH + FS + ++L S D
Sbjct: 162 HPHGEVLVSTSY-DNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASCSDD-- 218
Query: 951 LCV--WSTDGWEKQASKFLTIPNGRTASALADTRVQFHLD---QTHLLAV--HETQIAIY 1003
LCV WS +G ++S ++ I T S TR F L+ + LLA + ++ IY
Sbjct: 219 LCVKLWSWEGVCGKSSSWMCIA---TLSGY-HTRTIFDLNWSPDSQLLASCGSDNRLCIY 274
Query: 1004 EAP 1006
+ P
Sbjct: 275 KMP 277
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 135 (52.6 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
L+ + ++ + + H +N + FS P+ ++ V + D+ IK+WD TG
Sbjct: 353 LFLWSPAEDKKPLTRMTGHQALINQVLFS-PDSRI-VASASFDKSIKLWDGRTGKYLASL 410
Query: 504 EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSA 561
GH + VY I + + + S ++D +K W D ++ D PGH+ + A +S
Sbjct: 411 RGHVAAVYQIA--WSADSRLLVSGSSDSTLKVW--DVKAQKLAMDLPGHADEVYAVDWSP 466
Query: 562 DGARLFSCGTNK 573
DG R+ S G +K
Sbjct: 467 DGQRVASGGKDK 478
Score = 98 (39.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 56/277 (20%), Positives = 109/277 (39%)
Query: 424 VMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS--YPNKQLS-V 480
+ WSPDG + L+ G ++ L H + L++ + N + V
Sbjct: 162 ISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLA--GHSKWITGLSWEPLHANPECRYV 219
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW-LYD 539
+ +D +++WD G + I GH V C + ++S + D IK W +D
Sbjct: 220 ASSSKDGSVRIWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAHD 276
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ R GH MA S D A G + E+ V + +G+++ R
Sbjct: 277 GVLCRT-LQGHGHWVNTMALSTDYA--LRTGAFEPAEAS-VNPQDLQGSLQELKERALSR 332
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD-MDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
+V+ + R ++ D+F + W ++ L + L + F+ + ++A
Sbjct: 333 -YNLVRGQGPE-RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQ--VLFSPDSRIVA 388
Query: 659 VSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
++ D IK+ G + L ++ ++A +A
Sbjct: 389 SASFDKSIKLWDGRTG-KYLASLRGHVAAVYQIAWSA 424
Score = 93 (37.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/187 (23%), Positives = 79/187 (42%)
Query: 459 IEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+E H +V +AFS K L+ + D ++ WD T T + +GH V SI
Sbjct: 110 LEGHSEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSIS--WS 165
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYS-----ADGARLFSCGTNK 573
+ + + S +G+I W + G +V GHS + S A+ + ++K
Sbjct: 166 PDGRKLASGCKNGQILLW-DPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+G + W+ + G +R G +SV +++ + A+ D IK W + L
Sbjct: 225 DGSVRI--WDTTAGRCERILTG-HTQSVTCLRWGGDGLLYSASQDR-TIKVWRAHDGVLC 280
Query: 634 ASIDADG 640
++ G
Sbjct: 281 RTLQGHG 287
Score = 91 (37.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ I+A D SI++++ R + L+GH + +A+S +LVS +DS L VW
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 77 (32.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ G DS++++++V+ ++ L GH + + +S + S G D L +W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 53 (23.7 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 372 LVVGTNMGDVMLWEVGSRERIA--VKSFKVWELGACSMPLQASLSSDYTASVNR 423
L G G ++LW+ + +++ + W G PL A+ Y AS ++
Sbjct: 171 LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSK 224
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 99 (39.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 43/219 (19%), Positives = 91/219 (41%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H G + L F Q++ T D + +W+ + F H +PV + K N+
Sbjct: 17 HSGGITQLRFGPDGAQIA--TSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVE 581
+ S D +K W G ++ A + + + + G + + +K + + V
Sbjct: 75 --VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVA 132
Query: 582 WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGG 641
+ + + + + RS +F A D+ ++ +D+D+ + + +
Sbjct: 133 RRQFVSSFAQQNNWV--RSA---KFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEE-- 185
Query: 642 LQASPC-IRFNKEGILLAVSTNDNGIKILANADGIRLLR 679
+A+P + ++ G +LAV+ N IKI + G +LL+
Sbjct: 186 -RAAPRQLAWHPWGNMLAVALGCNRIKIF-DVSGSQLLQ 222
Score = 88 (36.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP + +++ G +D +I+I ++ L GH + +AFS + + G+D QL
Sbjct: 237 HPSGHFLLS-GSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLL 295
Query: 953 VWSTDGWEKQASKF 966
VW ++ AS+F
Sbjct: 296 VWQSNLHTYDASQF 309
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 124 (48.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 47/182 (25%), Positives = 75/182 (41%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
S + + V RV++ P +L A + ++ Y GD R ++ H SV D++F
Sbjct: 105 SGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERT---LKGHTDSVQDISFDQT 161
Query: 475 NKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIK 534
K L+ +C D IK+WD GH+ V S+ N I S + D +K
Sbjct: 162 GKLLA--SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTMK 217
Query: 535 AWLYDNLGSRVDYDAPGHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT 592
W G V GH M+ + DG L SC ++ ++V E + ++
Sbjct: 218 MWEVAT-GYCVK-TFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREH 275
Query: 593 YH 594
H
Sbjct: 276 EH 277
Score = 112 (44.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 44/187 (23%), Positives = 78/187 (41%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSL--MVSASEDATIKVWDYE--AG 140
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 141 DFERTLKGHTDSVQDISFDQTGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + +K W++ + + G + +R N++G LLA +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFT--GHREWVRMVRPNQDGTLLASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP +++ +D +++I++ + L H+ +T L F +V+ D +
Sbjct: 347 HPGGRFVVSCA-DDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVK 405
Query: 953 VW 954
VW
Sbjct: 406 VW 407
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I+++++ L GH + G+ F +VS D L +W D K+
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW--DYKNKR 371
Query: 963 ASKFLT 968
K L+
Sbjct: 372 CMKTLS 377
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 139 (54.0 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 67/353 (18%), Positives = 132/353 (37%)
Query: 321 LSVNILPVAYTPQSLGQSSYSTDDLPKTV-VMTLNQGSAVKSMDFHPVQQILLVVGTN-- 377
L +ILP+ + S + T +T V G + +++ H + ++ + N
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGH--RNVVYAIAFNNP 145
Query: 378 MGDVMLWEVGSRERIAVKSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
GD + GS + K+ K+W E G C + +TA + + ++P T+
Sbjct: 146 YGDKIA--TGSFD----KTCKLWSAETGKCYHTFRG-----HTAEIVCLSFNPQSTVVAT 194
Query: 436 AYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAV 495
L+ G+E+ + + H+ + L+F + ++T D + VWDA
Sbjct: 195 GSMDTTAKLWDIQSGEEV---VTLTGHLAEIISLSFDTSGDR--IITGSFDHTVVVWDAS 249
Query: 496 TGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSST 555
TG K + GH + + S + I + + D W D + GH
Sbjct: 250 TGRKVHTLIGHCAEISSAL--FSWDCSLILTGSMDKTCMLW--DATSGKCVATLTGHDDE 305
Query: 556 MMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLA 615
++ D + +G + + + K H + + + F+ NR L
Sbjct: 306 ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGH---EGEISKISFNPQGNRLLT 362
Query: 616 AGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ + WD+ L ++ + C FN +G ++ + DN +I
Sbjct: 363 GSSDKTARIWDVQTGQCLQVLEGHTD-EIFSCA-FNYKGNIVITGSKDNSCRI 413
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 124 (48.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 50/209 (23%), Positives = 86/209 (41%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H ++D F +P+ + T D +K+WD G FEGH V+S C H
Sbjct: 393 HTDWLSDCCF-HPSGD-KLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWS-CTWHSCG- 448
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVE 581
F+ S++ D K W D R GH+ ++ S + + + L
Sbjct: 449 NFVASSSLDKTSKIW--DVNSERCRCTLYGHTDSVN--SIEFFPFSNTLLTSSADKTLSI 504
Query: 582 WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMI-KFWDMDNVNLLASIDADG 640
W+ G +++ +G S+ FD + +A+ D + K WD + + SID
Sbjct: 505 WDARTGICEQSLYG-HMHSINDAIFDP-RGHMIASCDACGVTKLWDFRKLLPIVSIDI-- 560
Query: 641 GLQASPCIRFNKEGILLAVSTNDNGIKIL 669
G + F+ G +LA ++ + I +L
Sbjct: 561 GPSPGNEVNFDSSGRVLAQASGNGVIHLL 589
Score = 67 (28.6 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
++A + I + +++ E+ KL GH+ + FS+ +L S G+D + WS
Sbjct: 576 VLAQASGNGVIHLLDLKSGEIH-KLMGHENEAHTVVFSHDGEILFSGGSDGTVRTWS 631
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 61/221 (27%), Positives = 95/221 (42%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF------EGHESPVYSICP 515
H V +AFS N+Q +V+ DR IK+W+ + K I EGH V C
Sbjct: 116 HDKDVLSVAFSVDNRQ--IVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVS--CV 171
Query: 516 HHKENI--QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNK 573
N I S + D +K W N R + + G +A S DG+ S G K
Sbjct: 172 RFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGG--K 229
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRF-LAAGDEFMIKFWDMDNVNL 632
+G + L W+ +EG KR Y L S+ + + NR+ L A + IK WD+++ ++
Sbjct: 230 DGVTLL--WDLAEG--KRLY-SLDAGSI-IHSLCFSPNRYWLCAATQDSIKIWDLESKHI 283
Query: 633 LASIDADGGLQASP---CIRFN--KEGILLAVSTNDNGIKI 668
+ + + + + C N +G L D I+I
Sbjct: 284 VQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRI 324
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 124 (48.7 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 49/188 (26%), Positives = 77/188 (40%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD 539
+ T D IK+WD G EGH V+S C H F+ S + D K W D
Sbjct: 417 LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWS-CTWHSCG-DFVASASLDMTSKIW--D 472
Query: 540 NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
R Y GH+ ++ S + + + L W+ G +++ +G
Sbjct: 473 VNSERCRYTLYGHTDSVN--SIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYG-HMH 529
Query: 600 SVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
SV F T + +A+ D + K WD + + SID G + + F++ G +LA
Sbjct: 530 SVNDATF-TPRGHIIASCDARGVTKLWDFRKLIPIVSIDV--GPSSGNEVNFDQSGRVLA 586
Query: 659 VSTNDNGI 666
+ NGI
Sbjct: 587 -QASANGI 593
Score = 67 (28.6 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
Q ++A + I + +++ ++ KL GH+ + + FS+ L S G+D + +W
Sbjct: 580 QSGRVLAQASANGIIHLLDLKSGQIH-KLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 130 (50.8 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 56/255 (21%), Positives = 105/255 (41%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYH---GGDELRNHLEIEAHVGSVNDLAF 471
S ++ VN WSPDGTL + + ++ D L++ ++ GS+ F
Sbjct: 1647 SAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKF 1706
Query: 472 SYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDG 531
S +KQ+ T D + ++D V K G+ S + C + +I + + D
Sbjct: 1707 SANSKQILATTMKND--VLLFD-VNSQKLISVMGNHSKSVNHCSLSNDG-NYIVTGSDDA 1762
Query: 532 KIKAWLYDNLGSRV-DYDAPGHS-STMMAYSADGARLFSCGTNKEGESYLVEWNESEGAV 589
K W LG+++ ++ PG + +A+S L T+ + V N V
Sbjct: 1763 TAKVWS-STLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREV 1821
Query: 590 KRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIR 649
+ HG R++ + F + N + ++ +IK W++ +I+ + CI
Sbjct: 1822 AKL-HG-HTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPIN-CIS 1878
Query: 650 FNKEGILLAVSTNDN 664
FN +S +D+
Sbjct: 1879 FNPTNECELISCSDD 1893
Score = 118 (46.6 bits), Expect = 6.0e-05, Sum P(5) = 6.0e-05
Identities = 54/273 (19%), Positives = 101/273 (36%)
Query: 398 KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
KVW + + D A N + +SP L V + V L+ R
Sbjct: 1765 KVWSSTLGTQLTNFLIPGDCWA--NCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVA 1822
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE-GHESPVYSICPH 516
++ H ++ + FS P+ L + + ED +IKVW+ T +Y E H P+ I +
Sbjct: 1823 KLHGHTRAITSITFS-PSGNL-IASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFN 1880
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGE 576
+ I S + D K W + + + ++ YS DG + + +
Sbjct: 1881 PTNECELI-SCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIA 1939
Query: 577 SYLVEWNESEGAVKRTYHGLGKRS-VGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
YL + K + G V F + ++ G +F ++ W++ L
Sbjct: 1940 VYLCS------SKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLC 1993
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ G + F K+ + ++ D +K+
Sbjct: 1994 LK--GHSSSIEKAFFTKDQKYIISASFDGSVKV 2024
Score = 117 (46.2 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 55/259 (21%), Positives = 109/259 (42%)
Query: 426 WSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGE 485
+S DG++ A I+H++ G EL L + H ++ +FS K L+ +
Sbjct: 1530 YSRDGSMIASAGKDSIIHIFKASNGSEL---LTLVGHSNWISCFSFSDDGKTLA--SSSW 1584
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRV 545
D + VWD + G + + F+ H V + C + S A D I + +
Sbjct: 1585 DNTVIVWDLIVGNQIHQFKDHSRAV-NYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFR 1643
Query: 546 DYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESEGAVK-RTYH----GLGK 598
++ + HS + + +S DG + S ++ +G + WN + K R H L
Sbjct: 1644 NFRS-AHSKPVNSCCWSPDGTLIAS--SSWDGTIKI--WNPFDTIAKDRLKHVIDASLSY 1698
Query: 599 RSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
S+ +F + LA + + +D+++ L+ S+ + + C N +G +
Sbjct: 1699 GSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLI-SVMGNHSKSVNHCSLSN-DGNYIV 1756
Query: 659 VSTNDNGIKILANADGIRL 677
++D K+ ++ G +L
Sbjct: 1757 TGSDDATAKVWSSTLGTQL 1775
Score = 113 (44.8 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT--GTKQYIFEGHESPVYSICPHHK 518
AH GS+N FS K V TCG+D V+ +WDA T K IFE SPV + C ++
Sbjct: 2143 AHKGSINQCVFSKDGKY--VATCGQDCVLNIWDAKTHINLKTMIFE---SPV-TTCSFNR 2196
Query: 519 ENIQFIFSTATDGKIKAWLYD 539
+ FI DG ++ + D
Sbjct: 2197 SGVLFI--GLQDGTLEVYSKD 2215
Score = 88 (36.0 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 17/60 (28%), Positives = 36/60 (60%)
Query: 899 IIAIGMEDSSIQIYNVRVDEVK---TKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
++A+G D ++++++V + + KL GH + IT + FS + N++ S+ D + VW+
Sbjct: 1797 LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWN 1856
Score = 81 (33.6 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 30/111 (27%), Positives = 48/111 (43%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D IA D SI +Y ++ +LKGH + FS LVS G D L VW+
Sbjct: 1925 DGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWN 1984
Query: 956 TDGWEKQASKFLTIPNGRTASALADTRVQFHLDQTHLL-AVHETQIAIYEA 1005
+ K L G ++S + F DQ +++ A + + +++A
Sbjct: 1985 I-----KTQKELLCLKGHSSSI---EKAFFTKDQKYIISASFDGSVKVWDA 2027
Score = 67 (28.6 bits), Expect = 6.0e-05, Sum P(5) = 6.0e-05
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D +AIG D ++++ ++ +++ L IT L F ++ LVS D L V
Sbjct: 2329 PNDK-YLAIGTFDGTVELLDIASGKLRRILTTQVSSITSLKFLDSTR-LVSVSNDRSLIV 2386
Query: 954 W--STDGWEKQ 962
W ST E +
Sbjct: 2387 WNFSTSSIENE 2397
Score = 61 (26.5 bits), Expect = 6.0e-05, Sum P(5) = 6.0e-05
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 343 DDLPKTVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWEL 402
D L + +L+ GS +KS F + +L T DV+L++V S++ I+V +
Sbjct: 1686 DRLKHVIDASLSYGS-IKSCKFSANSKQILAT-TMKNDVLLFDVNSQKLISVMGNHSKSV 1743
Query: 403 GACSMPLQASL----SSDYTASV 421
CS+ + S D TA V
Sbjct: 1744 NHCSLSNDGNYIVTGSDDATAKV 1766
Score = 50 (22.7 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 126 DNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKN--SRLRTLI 175
D QL KY +T+ +LK +I+ NP +++L S N S L+ LI
Sbjct: 216 DTYQLGKY-NTEGKIKRRRKKLKDMIKKNPEQKEELTTNSKNNQSSSLKNLI 266
Score = 45 (20.9 bits), Expect = 6.8e-05, Sum P(4) = 6.8e-05
Identities = 31/136 (22%), Positives = 59/136 (43%)
Query: 49 EWDEVEKYLSGFTK---VDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEIL--VKDLK- 102
E+ E++ S F K + ++ S K+ I L+ LDK++RA ++ L +K
Sbjct: 1076 EYSELKVIFSSFLKKSALKASQNSQKVLLVIDG---LDQLDKKNRAHTLDWLPITSPIKL 1132
Query: 103 VFSAFNEDLFKEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPLFRDKLQ 162
+ S + D + + L E + + K ++L + + FR KL
Sbjct: 1133 IVSTLDGDHTQSV---LRRRRTPPTEIVVAPMEVKDRHSLVLGKFDE-------FRKKLD 1182
Query: 163 FPSLKNSRLRTLINQS 178
S N+++ L+N+S
Sbjct: 1183 -ESANNNQMSLLLNKS 1197
Score = 39 (18.8 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 283 KRPRTPPTNNSAMDYQTADSEH-VLKRSRPFG--ISDEVNNLSVNIL 326
+R RTPPT + D VL + F + + NN +++L
Sbjct: 1147 RRRRTPPTEIVVAPMEVKDRHSLVLGKFDEFRKKLDESANNNQMSLL 1193
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 145 (56.1 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 44/185 (23%), Positives = 80/185 (43%)
Query: 451 DELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPV 510
D+ R + H ++D+A +Y N ++ +C D++I+VW T + +GH + +
Sbjct: 213 DDGRLLATLRGHAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASI 270
Query: 511 YSI--CPHHKENIQFIFSTATDGKIKAWLYD----NLGSR----VDYDAPGHSSTMMAYS 560
S+ P + +++ ST DG I WL+D + R + PG ++S
Sbjct: 271 TSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGVQMICSSFS 330
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEF 620
A G L + T+ Y + E + +H V +QF T NRF++ +
Sbjct: 331 AGGMFLATGSTDHIIRVYFFGSGQPEKISELEFH---TDKVDSIQFSNTSNRFVSGSRDG 387
Query: 621 MIKFW 625
+ W
Sbjct: 388 TARIW 392
Score = 60 (26.2 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 22/88 (25%), Positives = 39/88 (44%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA-FSNTLNVLVSSGADSQLCVW 954
DN +I + + +++++N ++ L GH+ + L VL S+G D + VW
Sbjct: 436 DNTVIT-AVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVW 494
Query: 955 STDGWEKQASKFLTIPNGRTASALADTR 982
K S F I G+ A+ D +
Sbjct: 495 DLARGVKVRSYFNMI-EGQGHGAVFDCK 521
Score = 55 (24.4 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 750 KSRIWK---LTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLW 803
K R WK L T P+ + D +T M+V+ + + ++ +N K+W
Sbjct: 395 KRREWKSILLDMATRPAGQNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVW 451
Score = 44 (20.5 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 1 MSSLSRELVFLILQFLDE 18
+S L EL FLI +FL++
Sbjct: 8 LSELRSELYFLIARFLED 25
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 807 RNERNSTGKATTNQAPQLWQPP 828
R+ N T QAP L PP
Sbjct: 567 RDANNFVLDEQTQQAPHLMPPP 588
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 130 (50.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 52/221 (23%), Positives = 93/221 (42%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYI--FEGHESPVYSICPHHKE 519
H V+ + +P +++C D IK+W+ V ++ + F GH V +C +
Sbjct: 286 HTKGVSAIRL-FPKSGHLLLSCSMDCKIKLWE-VYNERRCVRTFIGHSKAVRDVC-FNNS 342
Query: 520 NIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGAR--LFSCGTNKEGES 577
QF+ S A D IK W + G + + ++ D + L G + +
Sbjct: 343 GTQFL-SAAYDRYIKLWDSET-GQCISRFTNRKVPYCVKFNPDEDKQNLLVAGMS---DK 397
Query: 578 YLVEWNESEGAVKRTY-HGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
+V+W+ G V + Y LG +V + F RF++ D+ ++ W+ D I
Sbjct: 398 KIVQWDIRSGEVVQEYDRHLG--AVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYI 455
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRL 677
A+ + + P + + G LA + DN I I + RL
Sbjct: 456 -AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRL 495
Score = 59 (25.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 13/60 (21%), Positives = 31/60 (51%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKR-ITGLAFSNTLNVLVSSGADSQLCVW 954
D + + G D + I++ + ++ ++K H K I+ L + + +++ G D Q+ +W
Sbjct: 518 DMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLW 577
Score = 54 (24.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA----FSNTLNVLVSSGADSQL 951
DN I+ G ++ R+++ K KGH + G A FS ++ +VS AD +L
Sbjct: 481 DNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMSYVVSGDADGKL 531
Query: 952 CVW 954
+W
Sbjct: 532 NIW 534
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 125 (49.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICPHHK 518
+H ++D Y +L+ TC DR +K++D G + I + GHE PV+ + H
Sbjct: 11 SHEDMIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP 68
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSA-DGARLFSCGTNKEG 575
+ S + D K+ W +N ++ GH S++ + ++ D + +CG++
Sbjct: 69 MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 576 ESYLVEWNESEGAVKR--TYHGLGKRSV 601
S L E + VK+ H +G +V
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAV 156
Score = 56 (24.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 933 LAFSNTLNVLVSSGADSQLCVW--STDG-W 959
+++S T N+L SG D+++ +W S DG W
Sbjct: 268 VSWSITANILAVSGGDNKVTLWKESVDGQW 297
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 62/282 (21%), Positives = 108/282 (38%)
Query: 399 VWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
VW L S+P + S + +R + D L + + ++ + G L N +
Sbjct: 110 VWSLAFGSSVPEKQSRCVNI--EWHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLV 167
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGHESPVYSICPH 516
+ H+ V DL F+ P+ L +V+ D+ ++VWD G + H++ VYS C
Sbjct: 168 D---HIEMVRDLTFA-PDGSLLLVSASRDKTLRVWDLKDDGNMVKVLRAHQNWVYS-CAF 222
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGE 576
+ + S + W D + H +S DGA L + + +
Sbjct: 223 SPD-CSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATA--SYDTR 279
Query: 577 SYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFLAAGDEFMIKF 624
Y+ W+ G + + H G R V V F + D+ M++F
Sbjct: 280 VYV--WDPHNGDLLMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLHVASLADDKMVRF 337
Query: 625 WDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI 666
W +D + GL C F+ +G +LA T+D +
Sbjct: 338 WRIDEDCPVQVAPLSNGL----CCAFSTDGSVLAAGTHDGSV 375
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 136 (52.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 64/291 (21%), Positives = 129/291 (44%)
Query: 409 LQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVND 468
L+ +L+ ++A+++ V +SP+G + + ++ ++ + G+ + + H ++D
Sbjct: 31 LRLTLAG-HSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKT---LYGHSLEISD 86
Query: 469 LAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTA 528
+A+S + +L V+ +D+ +KVWD +G +GH V+ C + + I S +
Sbjct: 87 VAWSSDSSRL--VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFC-CDFNPPS-NLIVSGS 142
Query: 529 TDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESYLVEWNESE 586
D +K W G + HS + A ++ +G+ + S G+ +G + W+ +
Sbjct: 143 FDESVKIWEVKT-GKCLK-TLSAHSDPISAVNFNCNGSLIVS-GSY-DGLCRI--WDAAS 196
Query: 587 GAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASP 646
G RT G V V+F L A + +K WD L + G
Sbjct: 197 GQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT--GHKNEKY 254
Query: 647 CI--RFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAA 695
C+ F+ G VS +++ + + N +++ ++ T D V SAA
Sbjct: 255 CLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHT-DV--VISAA 302
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 50/255 (19%), Positives = 98/255 (38%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
++ ++ V WS D + A + ++ G L+ ++ H V F+ P+
Sbjct: 80 HSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKT---LKGHSDFVFCCDFNPPSN 136
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
+V+ D +K+W+ TG H P+ ++ + N I S + DG + W
Sbjct: 137 L--IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAV--NFNCNGSLIVSGSYDGLCRIW 192
Query: 537 -LYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHG 595
R D + + +S +G + + ++ L W+ S G +TY G
Sbjct: 193 DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATL----DNTLKLWDYSRGRCLKTYTG 248
Query: 596 -LGKRSVGVVQFDTTKNRFLAAGDEF-MIKFWDMDNVNLLASIDADGGLQASPCIRFNKE 653
++ F T +++ +G E M+ W++ ++ + + S K
Sbjct: 249 HKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKN 308
Query: 654 GILLAVSTNDNGIKI 668
I A ND IK+
Sbjct: 309 IIASAALENDKTIKV 323
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/183 (25%), Positives = 78/183 (42%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W L + + LS + ++ V WSP G A +++ H E
Sbjct: 36 KAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKH---ECT 92
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
LE H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 93 ATLE--GHENEVKSVSWSRSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNAHSQDV 147
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + + + S + D IK + L S D A H+ST+ + + ADG RL
Sbjct: 148 KRVVWHPTKEV--LASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERL 205
Query: 567 FSC 569
SC
Sbjct: 206 VSC 208
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 137 (53.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/130 (29%), Positives = 54/130 (41%)
Query: 411 ASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGD---ELRNHL-EIEAHVGSV 466
A + + VN V W P G+L ++ +LR H EI S
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Query: 467 NDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFS 526
+ PNKQL++ + D +K+WDA G F GH PVYS+ N ++I S
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLA--FSPNGEYIAS 558
Query: 527 TATDGKIKAW 536
+ D I W
Sbjct: 559 GSLDKSIHIW 568
Score = 52 (23.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1 MSSL-SRELVFLILQFLDEEKFKETVHKLEQDSG 33
MSSL S EL FL+ ++L E F L ++G
Sbjct: 1 MSSLTSVELNFLVFRYLQESGFTHAAFTLGYEAG 34
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 49/181 (27%), Positives = 80/181 (44%)
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSIC 514
N E++ H G++ L+ N V++ D +K+WD TGT H+ V S+
Sbjct: 325 NIFEMKGHKGTI--LSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMV 382
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTN 572
H KE + F+T IK W + GS + + GH+S + MA +AD L S G N
Sbjct: 383 IHEKE---YSFATGAADNIKQWKCPD-GSFIK-NLSGHNSIINAMALNADNV-LVSGGDN 436
Query: 573 KEGESYLVEWN-----ESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDM 627
G +W + ++ + G+ + + FD T +R + + IKF+
Sbjct: 437 --GSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRLITCEADKTIKFYKE 494
Query: 628 D 628
D
Sbjct: 495 D 495
Score = 127 (49.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 53/252 (21%), Positives = 101/252 (40%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
S +T V + F + + + ++ G EL+ + + HV ++ L S
Sbjct: 204 SGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASG-ELK--VTLTGHVSAIRGLEVSSR 260
Query: 475 NKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIK 534
+ L V GED + WD + + + GH VYS+ H + +FS D ++
Sbjct: 261 HPYLFSV--GEDNKVLCWDLESNKQVRNYYGHRQGVYSVALH--PTLDVLFSGGRDNCVR 316
Query: 535 AWLYDNLGSRVD-YDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
W ++ +R + ++ GH T+++ + A + + L + A T
Sbjct: 317 VW---DMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTN 373
Query: 594 HGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKE 653
H G RS+ + + K A G IK W + + + ++ + + + N +
Sbjct: 374 HKKGVRSMVIHE----KEYSFATGAADNIKQWKCPDGSFIKNLSGHNSIINAMAL--NAD 427
Query: 654 GILLAVSTNDNG 665
+L VS DNG
Sbjct: 428 NVL--VSGGDNG 437
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 923 LKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS-TDGWEKQASKFLTIPNGRTASA 977
L GH I +A N NVLVS G + + W G+ Q ++ + P A
Sbjct: 412 LSGHNSIINAMAL-NADNVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEA 466
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 145 (56.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 44/185 (23%), Positives = 80/185 (43%)
Query: 451 DELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPV 510
D+ R + H ++D+A +Y N ++ +C D++I+VW T + +GH + +
Sbjct: 213 DDGRLLATLRGHAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASI 270
Query: 511 YSI--CPHHKENIQFIFSTATDGKIKAWLYD----NLGSR----VDYDAPGHSSTMMAYS 560
S+ P + +++ ST DG I WL+D + R + PG ++S
Sbjct: 271 TSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFS 330
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEF 620
A G L + T+ Y + E + +H V +QF T NRF++ +
Sbjct: 331 AGGMFLATGSTDHIIRVYFFGSGQPEKISELEFH---TDKVDSIQFSNTSNRFVSGSRDG 387
Query: 621 MIKFW 625
+ W
Sbjct: 388 TARIW 392
Score = 59 (25.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 22/88 (25%), Positives = 39/88 (44%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA-FSNTLNVLVSSGADSQLCVW 954
DN +I + + +++++N ++ L GH+ + L VL S+G D + VW
Sbjct: 436 DNTVIT-AVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVW 494
Query: 955 STDGWEKQASKFLTIPNGRTASALADTR 982
K S F I G+ A+ D +
Sbjct: 495 DLARGVKIRSYFNMI-EGQGHGAVFDCK 521
Score = 55 (24.4 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 750 KSRIWK---LTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLW 803
K R WK L T P+ + D +T M+V+ + + ++ +N K+W
Sbjct: 395 KRREWKSILLDMATRPAGQNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVW 451
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 1 MSSLSRELVFLILQFLDE 18
+S L EL FLI +FL++
Sbjct: 8 LSELRSELYFLIARFLED 25
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 807 RNERNSTGKATTNQAPQLWQPP 828
R+ N T QAP L PP
Sbjct: 567 RDANNFVLDEQTQQAPHLMPPP 588
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 141 (54.7 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 52/233 (22%), Positives = 109/233 (46%)
Query: 397 FKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNH 456
F ++EL + +M Q S++ ++++ + + G + SK + L + E
Sbjct: 278 FGIYELPSFTMLYQLSITQ---SNIDTLTVNSTGDWIAIGSSK-LGQLLVWEWQSE-SYV 332
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
L+ ++H +++ L +S ++ ++T +D IKVWD +G F H S V +C
Sbjct: 333 LKQQSHYDALSTLQYSSDGQR--IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFS 390
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS-TMMAYSADGARLFSCGTNKEG 575
+ N+ +FS++ DG ++AW + + AP + +A G + G+
Sbjct: 391 KRGNV--LFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSG-EIVCAGSQDSF 447
Query: 576 ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDM 627
E ++ W+ G + T G + V + F+++ + LA+G + ++ WD+
Sbjct: 448 EIFM--WSVQTGQLLETLAG-HEGPVSSLSFNSSGS-LLASGSWDKTVRIWDI 496
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 354 NQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGS 388
NQ S ++ FHP LLVVG + G ++E+ S
Sbjct: 252 NQNSKLRCAAFHPTSN-LLVVGFSSGLFGIYELPS 285
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 915 RVDEVKTKLKGH-QKRITGLAFSNTLNVLVSSGADSQLCVW 954
R D+ +T K T + +S + ++S+G +C++
Sbjct: 558 RFDDARTAENSSLNKTFTSICYSADGSCVLSAGTSKYVCLY 598
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H+ VN F +PN V T DR +++WD + G IF GH+ P++S+ N
Sbjct: 386 HLADVNCTRF-HPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT--FSPNG 441
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFS 568
+F+ + ATDG++ W + G V + GH+ T+ + +S DG L S
Sbjct: 442 RFLATGATDGRVLLWDIGH-GLMVG-ELKGHTDTVCSLRFSRDGEILAS 488
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICPHHK 518
+H ++D Y +L+ TC DR +K++D G + I + GHE PV+ + H
Sbjct: 11 SHEDMIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP 68
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSA-DGARLFSCGTNKEG 575
+ S + D K+ W +N Y+ GH S++ + ++ D + +CG++
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 576 ESYLVEWNESEGAVKR--TYHGLGKRSV 601
S L + + VK+ H +G +V
Sbjct: 129 ISLLSYTGDGQWEVKKISNAHTIGCNAV 156
Score = 109 (43.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 430 GTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVI 489
GT S V ++ G ++ ++ H G V +A+++P + +C DR +
Sbjct: 25 GTRLATCSSDRSVKIFDVRNGGQILI-ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83
Query: 490 KVWDAVTGT--KQYIFEGHESPVYSIC--PHHKENIQFIFSTATDGKIKAWLYDNLG 542
+W GT K Y + GH+S V S+C PH I + ++DG I Y G
Sbjct: 84 IIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLI--LACGSSDGAISLLSYTGDG 138
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 933 LAFSNTLNVLVSSGADSQLCVW--STDG-W 959
+++S T N+L SG D+++ +W S DG W
Sbjct: 267 VSWSITANILAVSGGDNKVTLWKESVDGLW 296
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 138 (53.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 76/304 (25%), Positives = 123/304 (40%)
Query: 400 WELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLE 458
W L A M L S D + +S DG + + L+ ++ N +
Sbjct: 237 WALKHAKHMALDCSNFGD-DRPLTGCSFSRDGKILATCSLSGVTKLWEM---PQVTNTIA 292
Query: 459 I-EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHH 517
+ + H D+ FS + L+ T DR K+W GT FEGH + + H
Sbjct: 293 VLKDHKERATDVVFSPVDDCLA--TASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHP 349
Query: 518 KENIQFIFSTATDGKIKAW-LYD-NLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNK 573
+++ +T+ D K W L+D N G+ + GHS ++ +A+ DGA SCG
Sbjct: 350 SG--KYLGTTSYD---KTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGL-- 401
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+S W+ G + G K V V F + G++ + WD+ L
Sbjct: 402 --DSLARVWDLRTGRSILVFQGHIK-PVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSL 458
Query: 634 ASIDADGGLQASPCIRFN-KEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVA 692
I A L + +++ +EG LA ++ D + I + D V+S S+VA
Sbjct: 459 YIIPAHANLVSQ--VKYEPQEGYFLATASYDMKVNIWSGRD----FSLVKSLAGHESKVA 512
Query: 693 SAAI 696
S I
Sbjct: 513 SLDI 516
Score = 49 (22.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 213 PSPVTNPLMGAVPKAGAFPPL---SAHGPFQPTPAALPTSLAGWMANPSPV-PHPSPSAG 268
P+ N + A + A P L S+ F P +P S MA P P+ PHP P A
Sbjct: 3 PNKDDNVSLAATAQISAPPVLQDASSLPGFSAIPPVVPPSFPPPMA-PIPMMPHP-PVAR 60
Query: 269 P 269
P
Sbjct: 61 P 61
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICPHHK 518
+H ++D Y +L+ TC DR +K++D G + I + GHE PV+ + H
Sbjct: 11 SHEDMIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP 68
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSA-DGARLFSCGTNKEG 575
+ S + D K+ W +N ++ GH S++ + ++ D + +CG++
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 576 ESYLVEWNESEGAVKR--TYHGLGKRSV 601
S L E + VK+ H +G +V
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAV 156
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 933 LAFSNTLNVLVSSGADSQLCVW--STDG-W 959
+++S T N+L SG D+++ +W S DG W
Sbjct: 268 VSWSITANILAVSGGDNKVTLWKESVDGQW 297
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICPHHK 518
+H ++D Y +L+ TC DR +K++D G + I + GHE PV+ + H
Sbjct: 11 SHEDMIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP 68
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSA-DGARLFSCGTNKEG 575
+ S + D K+ W +N ++ GH S++ + ++ D + +CG++
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 576 ESYLVEWNESEGAVKR--TYHGLGKRSV 601
S L E + VK+ H +G +V
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAV 156
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 933 LAFSNTLNVLVSSGADSQLCVW--STDG-W 959
+++S T N+L SG D+++ +W S DG W
Sbjct: 268 VSWSITANILAVSGGDNKVTLWKESVDGQW 297
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICPHHK 518
+H ++D Y +L+ TC DR +K++D G + I + GHE PV+ + H
Sbjct: 11 SHEDMIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP 68
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSA-DGARLFSCGTNKEG 575
+ S + D K+ W +N ++ GH S++ + ++ D + +CG++
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 576 ESYLVEWNESEGAVKR--TYHGLGKRSV 601
S L E + VK+ H +G +V
Sbjct: 129 ISLLTYTGEGQWEVKKINNAHTIGCNAV 156
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 933 LAFSNTLNVLVSSGADSQLCVW--STDG-W 959
+++S T N+L SG D+++ +W S DG W
Sbjct: 268 VSWSITANILAVSGGDNKVTLWKESVDGQW 297
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 144 (55.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 104/471 (22%), Positives = 205/471 (43%)
Query: 355 QGSAVKSMDFHPVQQILLVVGTNMGDVMLWEV--GSRERIAVKSFKVWELGACSMPLQAS 412
Q VK+M F P + L++ G G VMLW+ G R+ IA F + ++ LQ
Sbjct: 670 QQEQVKAMAFLPDSK-LIISGYYDGSVMLWDTTTGDRQEIA-DHFGISKVNYTY--LQPP 725
Query: 413 LSSDYTASVNRVMWSPDG---TLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDL 469
Y ++ +S D FG + + L+ GD L+ L+ +H S +
Sbjct: 726 EQGGY--GLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGD-LQKILKGHSHECST--M 780
Query: 470 AFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTAT 529
AFS ++QL VT D +++W+ TG + F GH V S+ + Q + S +
Sbjct: 781 AFSSDSRQL--VTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS-SDGRQIV-SGSI 836
Query: 530 DGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAV 589
+ +K W G + A G + ++ A+S D +R + G K+G+ ++ W ++ G +
Sbjct: 837 EA-VKLWDAAT-GDLLKTLASGFAGSV-AFSPD-SRQIAAGF-KDGKIFI--W-DAAGTL 888
Query: 590 KRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIR 649
++T ++ + F + + + IK WD + + +A G + +
Sbjct: 889 QKTLER-HPGAIMSIAFSPDVKQLVTCSTDSTIKRWD---ITIGGVQEAVGHSKHVTTMV 944
Query: 650 FNKEGILLAVSTNDNGIKILANADG-IRL-----LRTVESRTF--DASRVASAAIVKAPA 701
+ +G ++A + D IK+ A G ++ L TVE F D ++ S + + A
Sbjct: 945 LSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCS---SEA 1001
Query: 702 IGTFGSANANVGTSLGERTAPAAAMVGMSNDSRNFT----DVKPKIADEAVE---KSRIW 754
+ + +A V S + +V +S D ++ + + K+ D A K+
Sbjct: 1002 VKIWDAATGKVQNSF--ESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAG 1059
Query: 755 KLTEITE--PSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLW 803
++ ++ ++L + + +++ L+++ IL+ +++ KLW
Sbjct: 1060 YRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLW 1110
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 916 VDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQASKFL 967
+ + ++ G+ I +AFS+ + ++ AD + VWS + K ASK+L
Sbjct: 1129 ITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKSLK-ASKYL 1179
Score = 50 (22.7 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 929 RITGLAFSNTLNVLVSSGADSQLCVW 954
+ITGL FS +++S+ D + +W
Sbjct: 1085 QITGLVFSPDAKLILSTSTDRAIKLW 1110
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKRDRA-KAVEIL 97
T D ++ + +F + ++LE L DR +A++ L
Sbjct: 495 TSNDSDKSQVSVFLHTKLLEWLECLSLLDRLPRAIDAL 532
Score = 37 (18.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 44 MVTNGEWDEVEKYL-SGFTKVDDNRYSMKIFFEIRKQKYLEALDKRDRAKAVEILVKDLK 102
M+T+ WD E+ L +G +V N + E Q A++ +K VE L + K
Sbjct: 232 MLTSRPWDGAERVLLAGQDQVQIN-----LDGEHNSQSVSGAVEAYITSK-VEELSRQHK 285
Query: 103 VFSAFNEDLFKEITQ 117
+ ++ E+T+
Sbjct: 286 YGATLKSEIETELTE 300
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W + + LS + ++ V WSP G A +++ H
Sbjct: 36 KAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKH-----E 90
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V +++S L+ TC D+ + +W+ V G ++ + H V
Sbjct: 91 CNATLEGHENEVKSVSWSQSGGLLA--TCSRDKSVWIWE-VAGDDEFECAAVLNAHTQDV 147
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP--GHSSTMMA--YSADGARL 566
+ H + I + S + D IK + L S D A H+ST+ + + ADG RL
Sbjct: 148 KRVVWHPSKEI--LASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEADGERL 205
Query: 567 FSC 569
SC
Sbjct: 206 VSC 208
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 53/230 (23%), Positives = 97/230 (42%)
Query: 450 GDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESP 509
G E++ + H G V AF L ++C ED ++ WD + T ++ GH P
Sbjct: 344 GSEIKT---LRGHSGPVYRTAFLTDASGL--LSCSEDSTVRYWDLKSFTNTVLYRGHAYP 398
Query: 510 VYSICPHHKENIQFIFSTAT-DGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARL 566
V+ + FSTA+ D + W + Y GH S + + + + +
Sbjct: 399 VWDV---DVSPCSLYFSTASHDRTARLWSFARTYPLRLY--AGHLSDVDCVKFHPNSNYI 453
Query: 567 FSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWD 626
+ T+K W+ +GA R + G + V + F +AG++ +K WD
Sbjct: 454 ATGSTDKTVRL----WSTRQGASVRLFTG-HRGPVLTLAFSPNGKYLASAGEDQRLKLWD 508
Query: 627 MDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI--LANADG 674
+ + L D G + F+++ L+A ++ DN +++ + NA G
Sbjct: 509 LASGGLFK--DLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHG 556
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/207 (23%), Positives = 95/207 (45%)
Query: 424 VMWSPDGTLFGVAYSKHI--VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVV 481
V +SPD +A H+ V+++ G + H ++ + +A+S K L+
Sbjct: 112 VAFSPDSKY--IATGSHLGKVNIFGVESGK--KEH-SLDTRGKFILSIAYSPDGKYLA-- 164
Query: 482 TCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNL 541
+ D +I ++D TG + EGH P+ S+ + Q + + + DG IK +YD
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT--FSPDSQLLVTASDDGYIK--IYDVQ 220
Query: 542 GSRVDYDAPGHSSTMM--AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKR 599
+ + GH S ++ A+S D S ++K + W+ S + T+ +
Sbjct: 221 HANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKS----IKVWDTSSRSCVNTFFD-HQD 275
Query: 600 SVGVVQFDTTKNRFLAAGDEFMIKFWD 626
V V+++ T ++ ++AGD+ I +D
Sbjct: 276 QVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 48/195 (24%), Positives = 87/195 (44%)
Query: 386 VGSRERIAVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSP--DGTLFGVAYSKHIVH 443
VGS+E ++W + M Q + +SV + SP D G A K +H
Sbjct: 156 VGSQEG----PLQLWNINTKKMLYQFK---GWGSSVTSCVSSPALDVVAIGCADGK--IH 206
Query: 444 LYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIF 503
++ +E+ E A G+V L+FS + L + + G VI +W+ Q +
Sbjct: 207 VHNIKLDEEIVT-FE-HASRGAVTALSFSTDGRPL-LASGGSFGVISIWNLNKKRLQSVI 263
Query: 504 -EGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD-NLGS-RVDYDAPGHSSTMMA-- 558
+ H+S + S+ + N + S + D +K W++D N G R+ GHS+ +
Sbjct: 264 RDAHDSSIISL--NFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIR 321
Query: 559 YSADGARLFSCGTNK 573
+ ++G + S G ++
Sbjct: 322 FYSNGRHILSAGQDR 336
Score = 90 (36.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
N ++A +D I++Y+V ++ + +GH RIT L FS ++SS D L +W
Sbjct: 527 NGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/254 (21%), Positives = 109/254 (42%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
S + V + P F + + ++ G +L+ L + H+ +V +A S
Sbjct: 205 SGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASG-KLK--LSLTGHISTVRGVAVS-- 259
Query: 475 NKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIK 534
N+ + +CGED+ +K WD + GH S VY + H I + + + D +
Sbjct: 260 NRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLH--PTIDVLVTCSRDATAR 317
Query: 535 AWLYDNLGSRVD-YDAPGHSSTMMAYSADGA--RLFSCGTNKEGESYLVEWNESEGAVKR 591
W ++ ++ + + GH++T+ A ++ + G++ ++ + W+ G +
Sbjct: 318 VW---DIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSH---DTTIRLWDLVAGKTRA 371
Query: 592 TYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFN 651
T K+SV + + F A+G IK W + N + ++ + + + N
Sbjct: 372 TLTN-HKKSVRALVLHPRQYTF-ASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAV--N 427
Query: 652 KEGILLAVSTNDNG 665
+G+L VS DNG
Sbjct: 428 SDGVL--VSGADNG 439
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 139 (54.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H+ VN F +PN V T DR +++WD + G IF GH+ P++S+ N
Sbjct: 626 HLADVNCTRF-HPNSNY-VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT--FSPNG 681
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFS 568
+F+ + ATDG++ W + G V + GH+ T+ + +S DG L S
Sbjct: 682 RFLATGATDGRVLLWDIGH-GLMVG-ELKGHTDTVCSLRFSRDGEILAS 728
Score = 51 (23.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 6 RELVFLILQFLDEEKFKETVHKLEQDSG 33
R+ + +LQFL + K +E L +++G
Sbjct: 94 RQTLLAVLQFLRQSKLREAEEALRREAG 121
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 18/90 (20%), Positives = 39/90 (43%)
Query: 54 EKYLSGFT-----KVDDNRYSM-KIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAF 107
E+Y SG +D +R + ++F+ + YLE + + +A K +
Sbjct: 215 EEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECY 274
Query: 108 NEDLFKEITQLLTLENFRDNEQLSKYGDTK 137
+D + ++ L E+ + NE + + +K
Sbjct: 275 YQDDLRVLSSLTKKEHMKGNETMLDFRTSK 304
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 242 TPAALPTSLAGWMANPSPVPHPSPSAG 268
TP A A +PVP +P AG
Sbjct: 63 TPKPTVAVSAAAPAGAAPVPAAAPDAG 89
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/205 (25%), Positives = 90/205 (43%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
+ + H + L S K+ +V + I+VWD GH++ + S+ H
Sbjct: 57 MSLTGHTTPIESLQISA--KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFH 114
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGE 576
+ F+ S + D IK W G Y + + + +S DG L S +
Sbjct: 115 PYGS--FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAA-----D 167
Query: 577 SYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFM-IKFWDMDNVNLLA 634
+ V+ W+ + G V + G V VV+F + LA+G M I+FWD++ ++++
Sbjct: 168 DHTVKLWDLTAGKVMFEFTG-HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVS 226
Query: 635 SIDADGGLQASP--CIRFNKEGILL 657
I+ + A+P CI FN +G L
Sbjct: 227 CIEEE----ATPVRCILFNPDGCCL 247
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 53/233 (22%), Positives = 98/233 (42%)
Query: 450 GDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESP 509
GD N+ + H G++ DL +S + + + D + WD TG + + GHE
Sbjct: 91 GD-CENYGILSGHRGAILDLQWSRDSD--IIFSASADMHLASWDLTTGERIRRYVGHEEV 147
Query: 510 VYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSC 569
+ S+ K + +FS + DG I W DY T +A S G ++S
Sbjct: 148 INSL-DISKRGEEILFSGSDDGTIGIW-DPRKKHAADYIESDFPVTAVAISEAGNEIYSG 205
Query: 570 GTNKEGESYLVEWNESEGAVKRTYHGLGKR-SVGVVQFDTTKNRFLAAGDEFMIKFWDM- 627
G + + + W+ + AV Y+ G R ++ ++ L+ + + WD+
Sbjct: 206 GIDND----IKVWDVRKKAV--VYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIR 259
Query: 628 ---DNVNLLASID-ADGGLQASPCIR--FNKEGILLAVSTNDNGIKILANADG 674
+ + D A G++ + +R ++KEG +A+ D + I +N G
Sbjct: 260 PFAPTERHIRTFDGAPMGIEKN-LVRGGWDKEGKRVAMGAADGTVVIWSNETG 311
Score = 65 (27.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGA-DSQLCV 953
+A+G D ++ I++ ++ KL GH+ + + FS L+ SG+ D L V
Sbjct: 294 VAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLV 348
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 66/288 (22%), Positives = 115/288 (39%)
Query: 399 VWELG-ACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
VW L S+P + S + +R + D L + + ++ + G L N +
Sbjct: 110 VWSLAFGSSVPEKQSRCVNI--EWHRFKFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLM 167
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVT-GTKQYIFEGHESPVYSICPH 516
+ H V DL F+ P+ L +V+ D+ ++VWD G + GH++ VY C
Sbjct: 168 D---HTEVVRDLTFA-PDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYG-CAF 222
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKE 574
++ + S + W D S + GH + ++A +S DGA L + + +
Sbjct: 223 SPDS-SILCSVGASKAVFLWDMDKY-SMIR-KLEGHHNDVVACEFSPDGALLATA--SYD 277
Query: 575 GESYLVEWNESEGAVKRTY-H-----------GLGKRSVGVVQFDTTKNRFLAAGDEFMI 622
Y+ W+ G + R + H G R V V F + D+ M+
Sbjct: 278 TRVYV--WDPYIGVILREFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIASLADDKMV 335
Query: 623 KFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILA 670
+FW +D + + GL C F+ +G +LA D + A
Sbjct: 336 RFWRIDEEYPVQVAPLNNGL----CCTFSTDGSVLAAG-QDGSVHFWA 378
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 141 (54.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 77/326 (23%), Positives = 133/326 (40%)
Query: 407 MPLQASLSSDYTASVNRVMW---SPDGT-LFGVAYSKHIVHLYTYHGGDELRNHLEIEAH 462
MPL+ + A +RV P T L Y+ + VH++ Y L E+
Sbjct: 1 MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGN-VHIWNYET-QTLVKSFEV-CD 57
Query: 463 VGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQ 522
V V F P K VVT +D I+V++ T + + FE H + S+ H +
Sbjct: 58 V-PVRAAKF-VPRKSW-VVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVH--PTLP 112
Query: 523 FIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEW 582
++ S++ D +K W +DN + + GH+ +M + + + T ++ V W
Sbjct: 113 YVISSSDDMLVKMWDWDNKWA-MKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKV-W 170
Query: 583 NESEGAVKRTYHGLGKRSVGVVQF--DTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADG 640
T G ++ V V + K ++ D+ ++K WD N + ++D
Sbjct: 171 QFGSNVPNFTLEG-HEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHA 229
Query: 641 GLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAIVKAP 700
+S C F+ E L+ + D+ ++ L +A+ RL T+ + RV K
Sbjct: 230 QNVSSVC--FHPELPLIITGSEDSTVR-LWHANTYRLETTLN---YGLERVWCIQAQKGA 283
Query: 701 AIGTFGSANANVGTSLGERTAPAAAM 726
G +V LG R PA +M
Sbjct: 284 NTIAIGYDEGSVTLKLG-REEPAVSM 308
Score = 107 (42.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 41/182 (22%), Positives = 78/182 (42%)
Query: 417 YTASVNRVMWSP-DGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPN 475
+T V ++ +P D F A V ++ + G + N +E H VN + + +
Sbjct: 141 HTHYVMQIAINPKDNNTFATASLDKTVKVWQF--GSNVPN-FTLEGHEKGVNCVDYYHGG 197
Query: 476 KQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKA 535
++ +++ +D ++K+WD T +GH V S+C H E + I + + D ++
Sbjct: 198 EKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVC-FHPE-LPLIITGSEDSTVRL 255
Query: 536 WLYDN--LGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
W + L + ++Y G + GA + G + EG S ++ E AV
Sbjct: 256 WHANTYRLETTLNY---GLERVWCIQAQKGANTIAIGYD-EG-SVTLKLGREEPAVSMDS 310
Query: 594 HG 595
G
Sbjct: 311 SG 312
Score = 72 (30.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 353 LNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQAS 412
L + VK +D HPV+ LL N G+V +W ++ VKSF+V C +P++A+
Sbjct: 12 LARSDRVKCVDLHPVETWLLAALYN-GNVHIWNYETQT--LVKSFEV-----CDVPVRAA 63
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 114 (45.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
+N+ ++ H+G V +AF N+ T DR IK+WD TG + GH V +
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFC--TGSADRTIKIWDVATGVLKLTLTGHIGQVRGL 218
Query: 514 CPHHKENIQFIFSTATDGKIKAW 536
++ ++FS D ++K W
Sbjct: 219 AVSNRHT--YMFSAGDDKQVKCW 239
Score = 71 (30.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS 949
P D +I G DS+I+ +++R + + H+K + +A N VS+ AD+
Sbjct: 305 PTDPQVIT-GSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADN 359
Score = 66 (28.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++ +++ ++V GH + LA TL+V+++ G DS VW
Sbjct: 232 DDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVW 281
Score = 54 (24.1 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 559 YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
Y G+RL +C EG+ + W E E A T+
Sbjct: 436 YDQTGSRLVTC----EGDKTIKMWKEDEDATPETH 466
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/203 (21%), Positives = 90/203 (44%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYI--FEGHESPVYSICPHHKENIQFIFSTATDGKIKAWL 537
+++ G D +K+WDA G ++ I + GH V IC + +F+ S D + + W
Sbjct: 320 LLSAGMDNTVKIWDAY-GDRRCIQTYMGHSQAVRDIC-FSNDGRRFL-SCGYDRQTRLWD 376
Query: 538 YDNLGSRVDYDAPGHSSTMMAYSADGARL--FSCGTNKEGESYLVEWNESEGAVKRTY-H 594
+ G + G + ++ D + F CG + + +++W+ + + Y
Sbjct: 377 TET-GKILSSFTNGKIPYCIKFNPDDDKQEQFLCGGS---DKKIIQWDIKSNQIVQEYDQ 432
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEG 654
LG +V + F RF+ + D+ ++ WD + ++ +D + + P + + +G
Sbjct: 433 HLG--AVNTITFLDDNRRFVTSSDDKSLRVWDW-GIPVVIKYISDPSMHSMPAVALHPKG 489
Query: 655 ILLAVSTNDNGIKILANADGIRL 677
A + DN I I + D R+
Sbjct: 490 KWFAAQSLDNQILIYSARDRFRM 512
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 108 (43.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 56/284 (19%), Positives = 117/284 (41%)
Query: 398 KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
++W+ PL +L +T+ V V +SP+G + + V ++ G L L
Sbjct: 174 RIWDCDT-GTPLH-TLKG-HTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPL 230
Query: 458 EIEAHVGSVNDLAFSYPNKQLS----VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
+ HV + LA+ + Q S + + +D +++WD ++ + GH+ V
Sbjct: 231 K--GHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSV--T 286
Query: 514 CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVD-YDAPGHSSTMMAYSADGARLFSCGTN 572
C + I++++ D IK W G+ + A H +A S D F T
Sbjct: 287 CVRWGGTGK-IYTSSHDRTIKVW-NSQTGTLIQTLSAHAHRVNHLALSTD----FILRTA 340
Query: 573 KEGESYLVEWNESE--GAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNV 630
+ V ++++ K+ + + +V+ + ++A D+F + WD ++
Sbjct: 341 YHDHTGKVPESDADKVAMAKKRFEKAATINNKIVE------KLVSASDDFTMYLWDPESS 394
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADG 674
+ + G + + F+ + +A + DN +K+ DG
Sbjct: 395 SKPVA-RLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDG 437
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 47/219 (21%), Positives = 82/219 (37%)
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
R + + H GSV + + K + T DR IKVW++ TGT H V
Sbjct: 273 RADIVLSGHKGSVTCVRWGGTGK---IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVN-- 327
Query: 514 CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA---RLFSCG 570
H + FI TA +D+ G + DA + + ++
Sbjct: 328 --HLALSTDFILRTA--------YHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKL 377
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLG-KRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDN 629
+ + + W + E + K LG ++ V V F +AG + +K W+ +
Sbjct: 378 VSASDDFTMYLW-DPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 630 VNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ ++ G C F+ + LL S+ D +K+
Sbjct: 437 GKFITTLRGHVGAVYQCC--FSADSRLLVSSSKDTTLKV 473
Score = 77 (32.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 13/59 (22%), Positives = 32/59 (54%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D+ ++ +D++++++NVR ++ L GH+ + + +S + S G D + +W
Sbjct: 458 DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 77 (32.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D IA D+ ++++N R + T L+GH + FS +LVSS D+ L VW+
Sbjct: 416 DMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWN 475
Score = 66 (28.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 20/113 (17%), Positives = 42/113 (37%)
Query: 330 YTPQSLGQSSYSTDDLPKTVVMTLNQGSAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSR 389
+TPQ++ + + + G A+ + F PV +V G+ +W+ +
Sbjct: 126 FTPQAI----FRVKAVSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG 181
Query: 390 ERI-AVKSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHI 441
+ +K W L P A +++ + R+ + G G H+
Sbjct: 182 TPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHV 234
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 122 (48.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 63/273 (23%), Positives = 125/273 (45%)
Query: 408 PLQASL--SSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEA--HV 463
P+ L + ++T+ + V +S DG ++ + ++ G +L L+ E+
Sbjct: 287 PISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAM-VFNVETG-KLITLLQEESSKRE 344
Query: 464 GS--VNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
G V +AFS K L+ T ED+ I++WD + GHE +YS+ K+
Sbjct: 345 GDLYVRSVAFSPDGKYLA--TGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSL-DFSKDG- 400
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVE 581
+ + S + D + W + ++ +T+M +S DG + + G+ + +
Sbjct: 401 KTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVM-FSPDG-QFIAAGSL---DKVIRI 455
Query: 582 WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNV-NLLASIDAD 639
W S G + HG + SV V F + ++L +G + IK W++ V N+ S+ +
Sbjct: 456 WTSS-GTLVEQLHG-HEESVYSVAF-SPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKE 512
Query: 640 GGLQASPCIRFNKEGILLAVSTNDNGIKILANA 672
GG+ +K+ +L+V+ + +G I++ +
Sbjct: 513 GGI-CKQTFTGHKD-FILSVTVSPDGKWIISGS 543
Score = 60 (26.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D I G +D +IQ ++ + L+GH + +A S + + D + +WS
Sbjct: 535 DGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWS 594
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 57/248 (22%), Positives = 88/248 (35%)
Query: 34 FFFNMRYFEDMVTNGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQ--KYLEALDKRDRA 91
F F + F+ M T+ V + L K ++ E +K +Y + +
Sbjct: 19 FTFTIFKFQFMATSNVSSRVNELLEAVKKEFEDICQKTKTVEAQKDDFEYKAMISAQINE 78
Query: 92 KAV-EILVKDLKVFSAFNEDLFKE-ITQLLTLENFRDNEQLSKY--GDTKSARGIMLAEL 147
A+ + V DL++ + +D ++E IT L R E S +K+ G
Sbjct: 79 MALMKQTVMDLEMQQSKVKDRYEEEITSLKAQLEARRKEIASGVVPQSSKTKHGRNSVSF 138
Query: 148 KKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQLCKNPRANPDIKTLFVDHTCGQP 207
K A P D P + N N S + ++P + D L T
Sbjct: 139 GKYGNAGPFNSDNSSKPLILN-------NGSSGGTPKNLRSPAIDSDGTVLAPIQTSNVD 191
Query: 208 NGARA-PSPVTNPLMGAVPKAGA---FP---PLSAHGP-------FQPTPAALPTSLAGW 253
G++ SP P +GA A FP PL H P TP A P + G
Sbjct: 192 LGSQYYSSPHVRPAVGATMAGSAMRTFPSNLPLG-HPPPPSDSANSSVTPIAAPLVVNGK 250
Query: 254 MANPSPVP 261
++ P P
Sbjct: 251 VSGNPPYP 258
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 132 (51.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 43/185 (23%), Positives = 80/185 (43%)
Query: 398 KVWELGACSMP--LQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
++WE + S + L +T +V WSP G L A ++ +G E
Sbjct: 52 RIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGS-EFEC 110
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQ---YIFEGHESPVYS 512
+E H V ++++ L+ TC D+ + +W+ + G + + GH V
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLA--TCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKM 168
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLY-DNLGS-----RVDYDAPGHSSTM--MAYSADGA 564
+ H ++ +FS + D IK W D+ G + GHSST+ ++++A G
Sbjct: 169 VQWHPTMDV--LFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGD 226
Query: 565 RLFSC 569
++ +C
Sbjct: 227 KMVTC 231
Score = 47 (21.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 598 KRSVGVVQFDTTK-NRFLA-AGDEFMIKFWDM 627
+ V VQ+ + NR LA A D+ M+K W +
Sbjct: 317 ENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
Score = 42 (19.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 893 HPQDNNIIAIGMEDSSIQIY-NVRVDEVK--------TKLKGHQKRITGLAFS--NTLNV 941
H ++IIA G D++I+++ + + D V K K H+ + + +S +
Sbjct: 274 HWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRL 333
Query: 942 LVSSGADSQLCVW 954
L S+ D + +W
Sbjct: 334 LASASDDGMVKIW 346
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 894 PQDNNIIAIGMED-SSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
P DN ++A G +D S + ++NV+ E++TK+ + H+ +T +A++ V+ G Q
Sbjct: 410 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 469
Query: 952 CVWSTDG-----WEKQASKFL-TIPNGRTASALADT 981
DG WE + L + +G+T A +DT
Sbjct: 470 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 504
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 60/225 (26%), Positives = 97/225 (43%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYL 57
+S +++ LI Q L+ +TV L Q+SG + F + V G+WD+ E L
Sbjct: 119 LSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDL 178
Query: 58 SGFTKVDDNRYSMKIFFEIRKQKYLEALDKRDR-----AKAVEILVKDLKVFSAFNEDLF 112
+ + + +++ + + + L + R + K +E L +D KV A + L
Sbjct: 179 NELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYL-EDGKVLEAL-QVLR 236
Query: 113 KEITQLLTLENFRDNEQLSKYGDTKSARGIML-AELK-KLIEANPLFRDKLQF---PS-- 165
E+T L N LS Y A + AE + K + DKLQ PS
Sbjct: 237 CELTPLKY--NTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVM 294
Query: 166 LKNSRLRTLINQSLNWQHQLC--KNPRA--NPDIKTLFVDHTCGQ 206
L RL+TL+ Q++ Q C N + N D +L +DH C +
Sbjct: 295 LPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSR 339
Score = 67 (28.6 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
GH+ + +A+S D L +CG + E +L WN G ++ + S+ V ++
Sbjct: 398 GHAYGVSYIAWSPDDNYLVACGPDDCSELWL--WNVQTGELRTKMSQSHEDSLTSVAWNP 455
Query: 609 TKNRFLAAGDEFMIKFWDMDNVNLLAS 635
RF+ G D+D NLL S
Sbjct: 456 DGKRFVTGGQRGQFYQCDLDG-NLLDS 481
Score = 64 (27.6 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTL-NVLVSSGADSQL 951
H +D IA G ED + I++ R + +L GH + + ++++ + +++ S+ D +
Sbjct: 580 HNED--FIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTV 637
Query: 952 CVW 954
+W
Sbjct: 638 RIW 640
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 649 RFNKEGILLAVSTNDNGIKIL-ANADG--IRLLRTVESRTFDASRVA 692
+F+ +G LA + D + I + D ++LL+T+E + S +A
Sbjct: 361 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 407
Score = 46 (21.3 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 737 TDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDN-LTAMRVSRLIYTNSGLAILALA 795
+D K +A + ++ R + ++T+ R++ D+ + + +S+ N LA+L +A
Sbjct: 494 SDGKTVLASDTHQRIRGYNFEDLTD----RNIVQEDHPIMSFTISK----NGRLALLNVA 545
Query: 796 SNAVHKLW 803
+ VH LW
Sbjct: 546 TQGVH-LW 552
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 894 PQDNNIIAIGMED-SSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
P DN ++A G +D S + ++NV+ E++TK+ + H+ +T +A++ V+ G Q
Sbjct: 411 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 470
Query: 952 CVWSTDG-----WEKQASKFL-TIPNGRTASALADT 981
DG WE + L + +G+T A +DT
Sbjct: 471 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 505
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 60/225 (26%), Positives = 97/225 (43%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYL 57
+S +++ LI Q L+ +TV L Q+SG + F + V G+WD+ E L
Sbjct: 120 LSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDL 179
Query: 58 SGFTKVDDNRYSMKIFFEIRKQKYLEALDKRDR-----AKAVEILVKDLKVFSAFNEDLF 112
+ + + +++ + + + L + R + K +E L +D KV A + L
Sbjct: 180 NELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYL-EDGKVLEAL-QVLR 237
Query: 113 KEITQLLTLENFRDNEQLSKYGDTKSARGIML-AELK-KLIEANPLFRDKLQF---PS-- 165
E+T L N LS Y A + AE + K + DKLQ PS
Sbjct: 238 CELTPLKY--NTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVM 295
Query: 166 LKNSRLRTLINQSLNWQHQLC--KNPRA--NPDIKTLFVDHTCGQ 206
L RL+TL+ Q++ Q C N + N D +L +DH C +
Sbjct: 296 LPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSR 340
Score = 67 (28.6 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
GH+ + +A+S D L +CG + E +L WN G ++ + S+ V ++
Sbjct: 399 GHAYGVSYIAWSPDDNYLVACGPDDCSELWL--WNVQTGELRTKMSQSHEDSLTSVAWNP 456
Query: 609 TKNRFLAAGDEFMIKFWDMDNVNLLAS 635
RF+ G D+D NLL S
Sbjct: 457 DGKRFVTGGQRGQFYQCDLDG-NLLDS 482
Score = 64 (27.6 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTL-NVLVSSGADSQL 951
H +D IA G ED + I++ R + +L GH + + ++++ + +++ S+ D +
Sbjct: 581 HNED--FIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTV 638
Query: 952 CVW 954
+W
Sbjct: 639 RIW 641
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 649 RFNKEGILLAVSTNDNGIKIL-ANADG--IRLLRTVESRTFDASRVA 692
+F+ +G LA + D + I + D ++LL+T+E + S +A
Sbjct: 362 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 408
Score = 46 (21.3 bits), Expect = 6.9e-05, Sum P(4) = 6.9e-05
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 737 TDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDN-LTAMRVSRLIYTNSGLAILALA 795
+D K +A + ++ R + ++T+ R++ D+ + + +S+ N LA+L +A
Sbjct: 495 SDGKTVLASDTHQRIRGYNFEDLTD----RNIVQEDHPIMSFTISK----NGRLALLNVA 546
Query: 796 SNAVHKLW 803
+ VH LW
Sbjct: 547 TQGVH-LW 553
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 137 (53.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 47/220 (21%), Positives = 96/220 (43%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTK-QYIFEGHESPVYSICPHHKEN 520
H V+ + F +P + +++ G D +K+WD K + GH V IC +
Sbjct: 281 HTKGVSAIRF-FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDIC-FSNDG 338
Query: 521 IQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGAR--LFSCGTNKEGESY 578
+F+ + D IK W + G + + G ++ + D + + G + +
Sbjct: 339 SKFL-TAGYDKNIKYWDTET-GQVISTFSTGKIPYVVKLNPDDDKQNILLAGMS---DKK 393
Query: 579 LVEWNESEGAVKRTY-HGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASID 637
+V+W+ + G V + Y LG +V + F RF+ + D+ ++ W+ + ++
Sbjct: 394 IVQWDINTGEVTQEYDQHLG--AVNTITFVDNNRRFVTSSDDKSLRVWEF-GIPVVIKYI 450
Query: 638 ADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRL 677
++ + + P I + G LA + DN I I + + +L
Sbjct: 451 SEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQL 490
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 56/215 (26%), Positives = 98/215 (45%)
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICP 515
E AH +VN L + ++ +VT GED + +W A+ G I GH S + S+
Sbjct: 11 EFVAHSAAVNCLKIGRKSSRV-LVTGGEDHKVNLW-AI-GKPNAILSLYGHSSGIDSVTF 67
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADG-ARLFSCGTNKE 574
E + + + A G IK W D ++V GH S ++ + F+ G+
Sbjct: 68 DASEGL--VAAGAASGTIKLW--DLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSL-- 121
Query: 575 GESYLVEWN-ESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
++ L W+ +G + TY G R V V++F ++ G++ ++K WD+ LL
Sbjct: 122 -DTNLKIWDIRKKGCI-HTYKG-HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLL 178
Query: 634 ASIDA-DGGLQASPCIRFNKEGILLAVSTNDNGIK 667
+ +G +Q+ + F+ LLA + D +K
Sbjct: 179 HEFKSHEGKIQS---LDFHPHEFLLATGSADKTVK 210
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 115 (45.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 50/209 (23%), Positives = 89/209 (42%)
Query: 476 KQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKA 535
K V +C +D ++ VW+ + + F GH+ VY C + + + I S D +I+
Sbjct: 58 KMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVY--CVKYSPDGETIASCGQDRQIRL 115
Query: 536 WLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
W + + S+ H + M++SADG L S +K + + ++ + +
Sbjct: 116 W-QNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQ--DKKFMCSFAG 171
Query: 594 HGLGKRSVGVVQFDTTKNRFLAAG-DEFMIKFWDM-------------DNVNLLASIDAD 639
H RS GV+ D R +A+G D+ + WD+ DNV +
Sbjct: 172 HKNWVRS-GVISPDM---RLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYS 227
Query: 640 GGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ + F+ +G L S+ D+ IKI
Sbjct: 228 DHMDTVSQVLFHPDGTCLISSSFDHKIKI 256
Score = 72 (30.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP +I+ D I+I ++R +++ H ++ ++ T L S+G+DS++
Sbjct: 239 HPDGTCLISSSF-DHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIK 297
Query: 953 VW 954
+W
Sbjct: 298 IW 299
Score = 66 (28.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
HP + + G DS I+I+++R L + K IT + F+ + + + G+ +
Sbjct: 281 HPTGYFLASAG-SDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCM 339
Query: 953 VWSTD 957
VW T+
Sbjct: 340 VWKTN 344
>ASPGD|ASPL0000057386 [details] [associations]
symbol:AN1335 species:162425 "Emericella nidulans"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA]
[GO:0031932 "TORC2 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0001558 EMBL:BN001308 GO:GO:0031929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045860
GO:GO:0030295 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 GO:GO:0031932 GO:GO:0031234 KO:K08266
EMBL:AACD01000018 HOGENOM:HOG000208395 OrthoDB:EOG4GF6PT
RefSeq:XP_658939.1 ProteinModelPortal:Q5BDP5 STRING:Q5BDP5
EnsemblFungi:CADANIAT00001278 GeneID:2877090 KEGG:ani:AN1335.2
OMA:NDYSEPR Uniprot:Q5BDP5
Length = 393
Score = 134 (52.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 57/206 (27%), Positives = 89/206 (43%)
Query: 396 SFKVWEL--GACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDEL 453
+ + WE G CS +Q D + VNR+ +PD A + V LY +
Sbjct: 13 TIRFWEALSGICSRTIQ---HPD--SQVNRLCITPDKRYLAAAGHNN-VKLYDIKSTNP- 65
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
+ E H ++ +AF K + VT ED +KVWD TG+ Q + H++PV +
Sbjct: 66 NPVMTFEGHTNNITGVAFHCEGKWM--VTSSEDGTVKVWDTRTGSLQRNY-AHKAPVNDV 122
Query: 514 CPHHKENIQFIFSTATDGKIKAWLYDNLGSRV-------DYDAPGHSSTMMAYSADGARL 566
H + + S G ++ W +LG V + D HS ++ ++DG+ L
Sbjct: 123 VIHPNQGE--LISGDRAGIVRVW---DLGESVCTHQLIPEDDVAVHS---VSVASDGSLL 174
Query: 567 FSCGTNKEGESYLVEWNE-SEGAVKR 591
C NK+G Y+ W E V R
Sbjct: 175 --CAGNKKGNVYI--WRMIQEAEVTR 196
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 919 VKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
++T L HQ+ + AFS LV+ +D +W
Sbjct: 328 LETTLANHQRWVWDCAFSADSAYLVTVSSDHYARLW 363
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 46/188 (24%), Positives = 82/188 (43%)
Query: 395 KSFKVW-ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDEL 453
K+ ++W + G + LS +T ++ V WSP G A V ++ G E
Sbjct: 36 KTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSG-EF 94
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESP 509
+ +E H V +++S L+ TC D+ + +W+ V +Y + H
Sbjct: 95 ECNATLEGHENEVKSVSWSKSGALLA--TCSRDKSVWIWE-VAQEDEYECAAVLNTHSQD 151
Query: 510 VYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSR-VDYDA-PGHSSTM--MAYSADGAR 565
V + H E++ + S + D I+ + D S +D H ST+ +A+ A G+R
Sbjct: 152 VKKVEWHPNEDV--LASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSR 209
Query: 566 LFSCGTNK 573
L SC ++
Sbjct: 210 LASCSDDQ 217
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 133 (51.9 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 48/159 (30%), Positives = 66/159 (41%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
S K+W L + P+ A + +T V RVMW P G G L+ +E+
Sbjct: 304 SVKLWSLDS-DEPV-ADIEG-HTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEI-- 358
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L E H V D+AF + + L+ T G D +VWD TG EGH +Y I
Sbjct: 359 -LHQEGHSMGVYDIAF-HQDGSLAG-TGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI-- 413
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
+ N I + + D K W D R Y P H +
Sbjct: 414 NFSPNGYHIATGSGDNTCKVW--DLRQRRCVYTIPAHQN 450
Score = 56 (24.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 894 PQDNNIIAIGMEDSSIQIY-NVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P N + G D++ +I+ + +KT L GH+ ++ GL S+ ++ + D
Sbjct: 459 PIHGNFLLTGAYDNTAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFK 517
Query: 953 VWSTD 957
+W +
Sbjct: 518 LWMAE 522
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 77 RKQKYLEALDKRDRAKAVEILVKDLKV 103
R+ + L ++R RA+ + + D +V
Sbjct: 82 RQAEVLAEFERRKRARQINVSTDDSEV 108
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 66 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 122
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 123 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 177
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 178 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 235
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 236 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 294
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 295 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 341
Score = 117 (46.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 21 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 76
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 77 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 130
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 131 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 188
Query: 662 NDNGIKI 668
ND +++
Sbjct: 189 NDQTVRV 195
Score = 62 (26.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 249 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 306
Query: 963 ASKFL 967
K L
Sbjct: 307 CMKTL 311
Score = 61 (26.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 293 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 179 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 211
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 132 (51.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 50/210 (23%), Positives = 92/210 (43%)
Query: 473 YPNKQLSVVTCGEDRVIKVWDAVTGTKQYI--FEGHESPVYSICPHHKENIQFIFSTATD 530
+P +++C D IK+W+ V G ++ + F GH V IC + +F+ S A D
Sbjct: 298 FPLSGHMLLSCSMDCKIKLWE-VYGDRRCLRTFIGHGKAVRDIC-FNNAGTRFL-SAAYD 354
Query: 531 GKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGAR--LFSCGTNKEGESYLVEWNESEGA 588
IK W + G + + ++ D + LF G + + +V+W+ G
Sbjct: 355 RYIKLWDTET-GQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMS---DKKIVQWDIRSGE 410
Query: 589 VKRTY-HGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPC 647
+ + Y LG +V + F RF++ D+ ++ W+ D + + A+ + + P
Sbjct: 411 IVQEYDRHLG--AVNTIVFVDENRRFVSTSDDKSLRVWEWD-IPVDFKYIAEPSMHSMPA 467
Query: 648 IRFNKEGILLAVSTNDNGIKILANADGIRL 677
+ + G LA + DN I I + RL
Sbjct: 468 VTLSPNGKWLACQSMDNQILIFGAQNRFRL 497
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA----FSNTLNVLVSSGADSQL 951
DN I+ G ++ R+++ K KGH + G A FS ++ ++S AD +L
Sbjct: 483 DNQILIFGAQN------RFRLNKKKI-FKGHM--VAGYACQVDFSPDMSYVISGDADGKL 533
Query: 952 CVW 954
+W
Sbjct: 534 NIW 536
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/60 (18%), Positives = 30/60 (50%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS-NTLNVLVSSGADSQLCVW 954
D + + G D + I++ + ++ +++K H K G + + + +++ G D + +W
Sbjct: 520 DMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 579
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 63/252 (25%), Positives = 101/252 (40%)
Query: 426 WSPDGTLFGVAYSKHIVHLYTYHGGDE-LRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCG 484
+SP +I +Y ++ +R E+ +H G ++ F ++Q +VT
Sbjct: 112 YSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRF-LNDRQ--IVTSS 168
Query: 485 EDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSR 544
D +WD GTK F H V S+ +N + S A D K W D +
Sbjct: 169 GDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKN--YFISGACDATAKLW--DLRSGK 224
Query: 545 VDYDAPGHSSTMMA--YSADGARLFSCGTNKEGESY-LVEWNESEGAVKRTYHGL--GKR 599
GH + + A Y +G S GT + S L + ++ T+ + G
Sbjct: 225 CVQTFTGHEADINAVQYFPNG---LSFGTGSDDASCRLFDIRADRELMQYTHDNILCGIT 281
Query: 600 SVGVVQFDTTKNRFLAAG-DEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLA 658
SVG + RFL AG D+F WD + S+ G + S C+ +G+ L
Sbjct: 282 SVGF----SFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGN-RVS-CLGVPTDGMALC 335
Query: 659 VSTNDNGIKILA 670
+ D+ +KI A
Sbjct: 336 TGSWDSLLKIWA 347
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 100 (40.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 31/117 (26%), Positives = 53/117 (45%)
Query: 420 SVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLS 479
+V + W D A + H + L+ +LR+ + H VN L N L
Sbjct: 82 AVLQAKWLQDDNYICSASADHKLFLWDVECESKLRS---FKGHDNIVNGLDII--NHNL- 135
Query: 480 VVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAW 536
V+C +D +K WD + +I + H+ P+ S+C K +F+F++ D IK +
Sbjct: 136 FVSCSDDNTLKFWDIRSKWAVHIIK-HDFPLLSVCSDKKG--EFLFTSCVDNTIKKY 189
Score = 79 (32.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D++I+ Y+ + ++K GH+ ITGL + +L S AD +C W
Sbjct: 183 DNTIKKYDCKNYKLKDTFIGHKDYITGLDINKDETMLASISADESICFW 231
Score = 73 (30.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGAD 948
++N++A G D+ + IY+ + +K L GH I +AF +++ S +D
Sbjct: 264 NDNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVEDIVASCSSD 316
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 133 (51.9 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 48/159 (30%), Positives = 66/159 (41%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
S K+W L + P+ A + +T V RVMW P G G L+ +E+
Sbjct: 319 SVKLWSLDS-DEPV-ADIEG-HTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEI-- 373
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L E H V D+AF + + L+ T G D +VWD TG EGH +Y I
Sbjct: 374 -LHQEGHSMGVYDIAF-HQDGSLAG-TGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI-- 428
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
+ N I + + D K W D R Y P H +
Sbjct: 429 NFSPNGYHIATGSGDNTCKVW--DLRQRRCVYTIPAHQN 465
Score = 56 (24.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 894 PQDNNIIAIGMEDSSIQIY-NVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P N + G D++ +I+ + +KT L GH+ ++ GL S+ ++ + D
Sbjct: 474 PIHGNFLLTGAYDNTAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFK 532
Query: 953 VWSTD 957
+W +
Sbjct: 533 LWMAE 537
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 77 RKQKYLEALDKRDRAKAVEILVKDLKV 103
R+ + L ++R RA+ + + D +V
Sbjct: 97 RQAEVLAEFERRKRARQINVSTDDSEV 123
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 133 (51.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 48/159 (30%), Positives = 66/159 (41%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
S K+W L + P+ A + +T V RVMW P G G L+ +E+
Sbjct: 321 SVKLWSLDS-DEPV-ADIEG-HTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEI-- 375
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L E H V D+AF + + L+ T G D +VWD TG EGH +Y I
Sbjct: 376 -LHQEGHSMGVYDIAF-HQDGSLAG-TGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI-- 430
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
+ N I + + D K W D R Y P H +
Sbjct: 431 NFSPNGYHIATGSGDNTCKVW--DLRQRRCVYTIPAHQN 467
Score = 56 (24.8 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 894 PQDNNIIAIGMEDSSIQIY-NVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P N + G D++ +I+ + +KT L GH+ ++ GL S+ ++ + D
Sbjct: 476 PIHGNFLLTGAYDNTAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFK 534
Query: 953 VWSTD 957
+W +
Sbjct: 535 LWMAE 539
Score = 37 (18.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 77 RKQKYLEALDKRDRAKAVEILVKDLKV 103
R+ + L ++R RA+ + + D +V
Sbjct: 99 RQAEVLAEFERRKRARQINVSTDDSEV 125
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 68/353 (19%), Positives = 130/353 (36%)
Query: 321 LSVNILPVAYTPQSLGQSSYSTDDLPKTVVM-TLNQGSAVKSMDFHPVQQILLVVGTN-- 377
L +ILP+ + S + T +T + G + +++ H + ++ + N
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGH--RNVVYAIAFNNP 145
Query: 378 MGDVMLWEVGSRERIAVKSFKVW--ELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGV 435
GD + GS + K+ K+W E G C + +TA + + ++P TL
Sbjct: 146 YGDKIA--TGSFD----KTCKLWSVETGKCYHTFRG-----HTAEIVCLSFNPQSTLVAT 194
Query: 436 AYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAV 495
L+ G+E+ + H + L+F+ + ++T D + VWDA
Sbjct: 195 GSMDTTAKLWDIQNGEEVYT---LRGHSAEIISLSFNTSGDR--IITGSFDHTVVVWDAD 249
Query: 496 TGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSST 555
TG K I GH + + S + I + + D K W D + GH
Sbjct: 250 TGRKVNILIGHCAEISSAS--FNWDCSLILTGSMDKTCKLW--DATNGKCVATLTGHDDE 305
Query: 556 MMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLA 615
++ D + +G + + + K H + + + F+ N L
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGH---EGEISKISFNPQGNHLLT 362
Query: 616 AGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ + WD L ++ + C FN +G ++ + DN +I
Sbjct: 363 GSSDKTARIWDAQTGQCLQVLEGHTD-EIFSCA-FNYKGNIVITGSKDNTCRI 413
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 123 (48.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 65/288 (22%), Positives = 118/288 (40%)
Query: 393 AVKSF-KVWELGA-CSMPLQASLSSDYTAS-VNRVMWSPDGTLFGVAYSKHIVHLYTYHG 449
AVK + K LG S+P + +T + +N +SPD T+ + + + L++
Sbjct: 296 AVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKA 355
Query: 450 GDE-LRNHLEIE---------AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTK 499
+ L +E +H G V FS NK L ++C ED ++W T T
Sbjct: 356 DKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYL--LSCSEDASARLWSVDTKTA 413
Query: 500 QYIFEGHESPVYSICPHHKENIQFIFSTAT-DGKIKAWLYDNLGS-RVDYDAPGHSSTM- 556
++GH PV+ + F+TA+ D + W D++ RV GH S +
Sbjct: 414 LVAYKGHTGPVWDVA---FGPFGHYFATASHDQTAQLWSCDHIYPLRV---FAGHLSDVD 467
Query: 557 -MAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLA 615
+ + + A + + ++K W+ G R ++G + V V + +
Sbjct: 468 CVTFHPNSAYVLTGSSDKTCRL----WDVHRGHSVRVFNG-HTQPVTAVAIAPDGHTMAS 522
Query: 616 AGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTND 663
A E +I WD+ + ++ G S + F++E +L +D
Sbjct: 523 ADSEGLIHLWDIGTGRRIKTMRGHRGNIYS--LSFSRESTVLVSGGSD 568
Score = 63 (27.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 24/102 (23%), Positives = 43/102 (42%)
Query: 113 KEITQLLTLENFRDNEQLSKYGDTKSARGIMLAELKKLIEANPL---FRDKLQFPSLKNS 169
KE+ +++ ++ + E + D + +L E +KL E N RD + P K
Sbjct: 231 KEMEKIVEMD--LEEEDMMHQNDPNNQSPKLLKEFRKLHEPNAEDAPSRDYIPLPPHKGV 288
Query: 170 RLRTLINQSLNWQHQLCKNPRAN-PDIKTLFVDHTCGQPNGA 210
+ + + +W +L PRA+ P + HT N A
Sbjct: 289 DILSEVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCA 330
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 125 (49.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 69/295 (23%), Positives = 117/295 (39%)
Query: 398 KVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHL 457
KV L S L SL + + SPD + A ++ + + G R
Sbjct: 46 KVNILDVASGALLRSLEQEDQEDITSFDLSPDDEVLVTASRALLLAQWAWREGTVTRLWK 105
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHH 517
I H V +AF + L+ C D ++VWD V + F G V+ + H
Sbjct: 106 AI--HTAPVASMAFDATSTLLATGGC--DGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHP 161
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNK---- 573
+FS+A D I+ W + A + T +++S G + S G +K
Sbjct: 162 DPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIV 221
Query: 574 -EGESY----LVEWNES-EGAV---KRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKF 624
+ +SY V ES E +V ++ LG +S G+ FL AGD+ +++
Sbjct: 222 WDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGL--------HFLTAGDQGILRV 273
Query: 625 WDMDNVNLLASIDADGGL--QASPCIRFNKEGILLAVSTNDNGIKILANADGIRL 677
W+ + + + GL + + C +LL V+ + N +L A ++L
Sbjct: 274 WEAASGQCVYTQPQMPGLRQELTHCTLARAADLLLTVTADHN--LLLYEAHSLQL 326
Score = 71 (30.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A G +D + +++ + ++ GH++ + + FS T VL ++ AD + +
Sbjct: 489 PNDK-LLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASADGTIKL 547
Query: 954 WS 955
W+
Sbjct: 548 WA 549
Score = 69 (29.3 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCV 953
P D ++A D +I+++ ++ +GH + +AF + + L+SSG+D L +
Sbjct: 531 PTDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKL 589
Query: 954 WS 955
W+
Sbjct: 590 WT 591
Score = 69 (29.3 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 14/69 (20%), Positives = 37/69 (53%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+ +++ G D ++++ ++ +E L H+ ++ GL S + ++ G+DS++ +W
Sbjct: 576 SQLLSSG-SDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKD 634
Query: 957 DGWEKQASK 965
+QA +
Sbjct: 635 VTEAEQAEE 643
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 823 QLWQPPSGILMTNDISDTNP 842
+LW P +L + +D+ P
Sbjct: 447 KLWPLPEALLAKSTAADSGP 466
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 137 (53.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 55/211 (26%), Positives = 91/211 (43%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI--CPHHKE 519
H G V AF+ P L +++C ED I++W +T + + GH PV+ + PH
Sbjct: 449 HTGPVYRCAFA-PEMNL-LLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH--- 503
Query: 520 NIQFIFSTATDGKIKAWLYD-NLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESY 578
F+ S + D + W D N RV GH S + + T +
Sbjct: 504 GYYFV-SCSYDKTARLWATDSNQALRVFV---GHLSDVDCVQFHPNSNY-VATGSSDRTV 558
Query: 579 LVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDMDNVNLLASID 637
+ W+ G R G K SV + F R+LA+G + I WD+ N +L+ ++
Sbjct: 559 RL-WDNMTGQSVRLMTG-HKGSVSSLAFSAC-GRYLASGSVDHNIIIWDLSNGSLVTTLL 615
Query: 638 ADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ I F+++G +LA + DN + +
Sbjct: 616 RHTSTVTT--ITFSRDGTVLAAAGLDNNLTL 644
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 141 (54.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 56/227 (24%), Positives = 94/227 (41%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENI 521
H V +AF P L + T G D ++VWD V + F G V+ + H
Sbjct: 16 HTAPVATMAFD-PTSTL-LATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTR 73
Query: 522 QFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVE 581
+FS+ATD I+ W + A + T +A+SADG + S G +K +
Sbjct: 74 LLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK----ICII 129
Query: 582 WNESEGAVKRT---YHG------LGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNL 632
W+ RT + L + V + + FL AGD+ ++ W+ +
Sbjct: 130 WDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQC 189
Query: 633 L-ASIDADG-GLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRL 677
+ G G + + C + G++L +T D+ + +L A +RL
Sbjct: 190 VYTQAQPPGPGQELTHCTLAHTAGVVLT-ATADHNL-LLYEARSLRL 234
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 779 VSRLIYTNSGLAILALASNAVHKLWKWPRNE 809
V ++ + + G +L+ S+ + KLW NE
Sbjct: 455 VLKVAFVSRGTQLLSSGSDGLVKLWTIKNNE 485
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 130 (50.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 454 RNHLEI-EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYS 512
R+++ + H G+V D+ + Q V+T D +++WD G + H+ + S
Sbjct: 259 RSNIHVLSGHTGTVADVQCQEADPQ--VITGSLDATVRLWDLAAGKTMGVLTHHKKGIRS 316
Query: 513 ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGAR-LFSCGT 571
+ H +E F F++A+ G IK W G + GH++ + S + LFS G
Sbjct: 317 LATHPRE---FTFASASTGSIKQWKCP--GGEFMQNFEGHNAIINTLSVNEDNVLFSGGD 371
Query: 572 NKEGESYLVEWNESEG--AVKRTYH-GLGKRSVGVVQ--FDTTKNRFLAAGDEFMIKFWD 626
N G +W + T G + G++ FD T R + + IK W
Sbjct: 372 N--GSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVWK 429
Query: 627 MDN 629
D+
Sbjct: 430 QDD 432
Score = 51 (23.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 357 SAVKSMDFHPVQQILLVVGTNMGDVMLWEVGSRERIAVKS 396
S V ++ HP + LLV G G +W++ +R I V S
Sbjct: 228 SGVYTLALHP-RLDLLVTGGRDGVARVWDMRTRSNIHVLS 266
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 91 (37.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 60/225 (26%), Positives = 97/225 (43%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYL 57
+S +++ LI Q L+ +TV L Q+SG + F + V G+WD+ E L
Sbjct: 100 LSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDL 159
Query: 58 SGFTKVDDNRYSMKIFFEIRKQKYLEALDKRDR-----AKAVEILVKDLKVFSAFNEDLF 112
+ + + +++ + + + L + R + K +E L +D KV A + L
Sbjct: 160 NELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYL-EDGKVLEAL-QVLR 217
Query: 113 KEITQLLTLENFRDNEQLSKYGDTKSARGIML-AELK-KLIEANPLFRDKLQF---PS-- 165
E+T L N LS Y A + AE + K + DKLQ PS
Sbjct: 218 CELTPLKY--NTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVM 275
Query: 166 LKNSRLRTLINQSLNWQHQLC--KNPRA--NPDIKTLFVDHTCGQ 206
L RL+TL+ Q++ Q C N + N D +L +DH C +
Sbjct: 276 LPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSR 320
Score = 88 (36.0 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 894 PQDNNIIAIGMED-SSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
P D+ ++A G +D S + ++NV+ E++TK+ + H+ +T +A++ V+ G Q
Sbjct: 391 PDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 450
Query: 952 CVWSTDG-----WEKQASKFL-TIPNGRTASALADT 981
DG WE + L + +G+T A +DT
Sbjct: 451 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 485
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
GH+ + +A+S D + L +CG + E +L WN G ++ + S+ V ++
Sbjct: 379 GHAYGVSYIAWSPDDSYLVACGPDDCSELWL--WNVQTGELRTKMSQSHEDSLTSVAWNP 436
Query: 609 TKNRFLAAGDEFMIKFWDMDNVNLLAS 635
RF+ G D+D NLL S
Sbjct: 437 DGKRFVTGGQRGQFYQCDLDG-NLLDS 462
Score = 64 (27.6 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTL-NVLVSSGADSQL 951
H +D IA G ED + I++ R + +L GH + + ++++ + +++ S+ D +
Sbjct: 561 HNED--FIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTV 618
Query: 952 CVW 954
+W
Sbjct: 619 RIW 621
Score = 49 (22.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 649 RFNKEGILLAVSTNDNGIKIL-ANADG--IRLLRTVESRTFDASRVA 692
+F+ +G LA + D + I + D ++LL+T+E + S +A
Sbjct: 342 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 388
Score = 46 (21.3 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 737 TDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDN-LTAMRVSRLIYTNSGLAILALA 795
+D K +A + ++ R + ++T+ R++ D+ + + +S+ N LA+L +A
Sbjct: 475 SDGKTVLASDTHQRVRGYNFEDLTD----RNIVQEDHPIMSFTISK----NGRLALLNVA 526
Query: 796 SNAVHKLW 803
+ VH LW
Sbjct: 527 TQGVH-LW 533
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 126 (49.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 43/185 (23%), Positives = 74/185 (40%)
Query: 395 KSFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELR 454
K+ ++W + L + ++ + WSP GT A ++ G E
Sbjct: 27 KTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSG-EFE 85
Query: 455 NHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY----IFEGHESPV 510
+ +E H V + +S L+ TCG D+ + +W+ V +Y + H V
Sbjct: 86 CNATLEGHENEVKSVDWSVSGSLLA--TCGRDKSVWIWE-VQEDDEYECASVIHSHTQDV 142
Query: 511 YSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA--RLFS 568
+ H + I + S + D IK + D GH ST+ + S DG+ R+ S
Sbjct: 143 KKVVWHPTKEI--LASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVS 200
Query: 569 CGTNK 573
C +K
Sbjct: 201 CSDDK 205
Score = 50 (22.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 893 HPQDNNIIAIGMEDSSIQIY 912
HP+D NI+A +D +++++
Sbjct: 301 HPKDENILATCSDDGTVKLW 320
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 117 (46.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 454 RNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI 513
+N+ I+ H+G V +AF N+ T DR IK+WD TG + GH V +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFC--TGSADRTIKIWDVATGVLKLTLTGHIEQVRGL 224
Query: 514 CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
++ ++FS D ++K W D ++V GH S
Sbjct: 225 AVSNRHT--YMFSAGDDKQVKCW--DLEQNKVIRSYHGHLS 261
Score = 65 (27.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 894 PQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS 949
P D ++ G D++I+ +++R + + L H+K + + N S+ AD+
Sbjct: 312 PTDPQVVT-GSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN 366
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 91 (37.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 894 PQDNNIIAIGMED-SSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
P DN ++A G +D S + ++NV+ E++TK+ + H+ +T +A++ V+ G Q
Sbjct: 434 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 493
Query: 952 --CVWS---TDGWEKQASKFL-TIPNGRTASALADT 981
C + D WE + L + +G+T A +DT
Sbjct: 494 YQCDLNGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 528
Score = 90 (36.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 61/226 (26%), Positives = 97/226 (42%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQDSGFFF---NMRYFEDMVTNGEWDEVEKYL 57
+S +++ LI Q L +TV L Q+SG + F + V GEWD+ E L
Sbjct: 142 LSQSDEDVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGEWDKAENDL 201
Query: 58 SGFTKVDDNRYSMKIFFEIRK-QKYLEALDKRDR-----AKAVEILVKDLKVFSAFNEDL 111
+ + + +++ + + Q + L +R + K +E L +D KV A + L
Sbjct: 202 NELKALVHSPHAIVVRGTLELFQSCILGLGQRMKFLLLQQKYLEYL-EDGKVLEAL-QVL 259
Query: 112 FKEITQLLTLENFRDNEQLSKYGDTKSARGIML-AELK-KLIEANPLFRDKLQF---PS- 165
E+T L N LS Y A + AE + K + DKLQ PS
Sbjct: 260 RCELTPLKY--NTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSV 317
Query: 166 -LKNSRLRTLINQSLNWQHQLC--KNPR--ANPDIKTLFVDHTCGQ 206
L RL+ L+ Q++ Q C N + +N D +L +DH C +
Sbjct: 318 MLPPRRLQNLLRQAVELQRDRCLYHNTKLDSNLDSVSLLIDHVCSR 363
Score = 66 (28.3 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
GH+ + +A+S D L +CG + E +L WN G ++ + S+ V ++
Sbjct: 422 GHAYGVSYIAWSPDDNYLVACGPDDCSELWL--WNVQTGELRTKMSQSHEDSLTSVAWNP 479
Query: 609 TKNRFLAAGDEFMIKFWDMD-NVNLLAS 635
RF+ G +F+ D N NLL S
Sbjct: 480 DGKRFVTGGQRG--QFYQCDLNGNLLDS 505
Score = 64 (27.6 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTL-NVLVSSGADSQL 951
H +D IA G ED + I++ R + +L GH + + ++++ + +++ S+ D +
Sbjct: 604 HNED--FIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTV 661
Query: 952 CVW 954
+W
Sbjct: 662 RIW 664
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 649 RFNKEGILLAVSTNDNGI---KILANADGIRLLRTVESRTFDASRVA 692
+F+ +G LA + D + ++ + ++LL+T+E + S +A
Sbjct: 385 KFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYIA 431
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 737 TDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDN-LTAMRVSRLIYTNSGLAILALA 795
+D K +A + ++ R + ++T+ R++ D+ + + +S+ N LA+L +A
Sbjct: 518 SDGKTVLASDTHQRIRGYNFEDLTD----RNIVQEDHPIMSFTISK----NGRLALLNVA 569
Query: 796 SNAVHKLW 803
+ VH LW
Sbjct: 570 TQGVH-LW 576
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/248 (20%), Positives = 111/248 (44%)
Query: 441 IVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQ 500
+V ++ + L+ +++ H V +A S + ++ + D + +WDA +G K+
Sbjct: 63 LVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQ--TIASSSLDSTMCLWDARSGDKK 120
Query: 501 YIFEGHESPVYSI--CPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM-M 557
++ ++++ P +K ++ S DGKI + + + DA T+ +
Sbjct: 121 HLLSFGPVDLWTVQFSPCNK----YVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSI 176
Query: 558 AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAG 617
AYS DG + S + + ++ + G V +T G V + F L A
Sbjct: 177 AYSPDGKYIASGAI----DGIITIFDVAAGKVVQTLEGHAM-PVRSLCFSPNSQLLLTAS 231
Query: 618 DEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRL 677
D+ +K +D+ + +++ ++ G C+ F+++G A S++DN +KI ++ +
Sbjct: 232 DDGHMKLYDVTHSDVVGTLS--GHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSER-KC 288
Query: 678 LRTVESRT 685
L T T
Sbjct: 289 LHTFAEHT 296
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 109 (43.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 491 VWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAP 550
+WD G K I +G++ V +CP + + DG I+ ++ L +
Sbjct: 49 IWDLRKGEKILILQGNKQEVTCLCPS-PDGLHLAVGYE-DGAIR--IFSLLSGEGNITFN 104
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEW---NESEGAVKRTYHGLGKRSVGVVQ 605
GH + T + Y G RL S G+ ++ ++ W NES G + H K +V
Sbjct: 105 GHKAAVTSLKYDQLGGRLAS-GSK---DTDVIIWDVINES-GLYRLKGH---KDAVTQAL 156
Query: 606 FDTTKNRFLAAGDEFMIKFWDMDN 629
F +N + +G + M+K+WD+DN
Sbjct: 157 FLRERNLLVTSGKDTMVKWWDLDN 180
Score = 80 (33.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 50/252 (19%), Positives = 100/252 (39%)
Query: 746 EAVEKSRIWKLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLWKW 805
+A +K+R+ E +P S+ L D + +RV++ I T++ + L + +L
Sbjct: 324 KARKKARLNSANEEEDPETSVSMTLQDEI--LRVAK-IKTSAKIKSFDLIHSPQGELKAV 380
Query: 806 PRNERNSTGKATTNQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGGK 865
+ N + N + QP + T+ I+ V + S ++ V+SA+
Sbjct: 381 FLLQNNLVELYSLNASLPAPQP----VRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS 436
Query: 866 ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKG 925
I ++N P D ++ IG + ++Q+Y++ + +
Sbjct: 437 IKIWNRSTLQCIRTMPCEYALCSFFV--PGDRQVV-IGTKTGNLQLYDLASGTLLETIAA 493
Query: 926 HQKRITGLAFSNTLNVLVSSGADSQLCVWSTD-GWEKQAS-KFLTIPNGRTASALADTRV 983
H + ++ S V+ GAD + W + +K ++ K L++ RT D
Sbjct: 494 HDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLC 553
Query: 984 QFHLDQTHLLAV 995
+ LLAV
Sbjct: 554 VSYSPNQKLLAV 565
Score = 69 (29.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
D +IA G D +++I+ + + L H + L F ++ ++G D ++ W
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 956 TDGWE 960
D +E
Sbjct: 661 ADKFE 665
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 130 (50.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 45/159 (28%), Positives = 67/159 (42%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
S K+W L + P+ A + ++ V RVMW P G G H L+ +E+
Sbjct: 303 SVKLWSLES-DEPV-ADIEG-HSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEI-- 357
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L E H V D+AF + + L+ T G D +VWD TG EGH +Y +
Sbjct: 358 -LHQEGHSKGVYDIAF-HTDGSLAG-TGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGL-- 412
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
+ N + + + D K W D + Y P H +
Sbjct: 413 NFSPNGYHVATGSGDNTCKVW--DLRQRKCIYTIPAHQN 449
Score = 96 (38.9 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 48/218 (22%), Positives = 85/218 (38%)
Query: 461 AHVGSVNDLAFSY--PNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHK 518
+ +G L++ + PN +L C + K+W + GH + V +I H K
Sbjct: 225 SQIGDDRPLSYCHFSPNSKLLATACWSG-LCKLWSVPDCNLVHTLRGHSTNVGAIVFHPK 283
Query: 519 ENIQF------IFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTN 572
+ + S A DG +K W ++ D + GHS + + F GT
Sbjct: 284 ATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIE--GHSMRVARVMWHPSGRF-LGTT 340
Query: 573 KEGESYLVEWNESEGAVKRTYHGLGKRSVGV--VQFDTTKNRFLAAGDEFMIKFWDMDNV 630
S+ + W+ A + H G S GV + F T + G + + WD+
Sbjct: 341 CYDHSWRL-WDLE--AQEEILHQEG-HSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTG 396
Query: 631 NLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ ++ G L+ + F+ G +A + DN K+
Sbjct: 397 RCIMFLE--GHLKEIYGLNFSPNGYHVATGSGDNTCKV 432
Score = 82 (33.9 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS-NTLNVLVSSGADSQLCVWSTDG 958
+A G D++ +++++R + + HQ +TG+ F N N L++ D+ +W+ G
Sbjct: 421 VATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPG 480
Query: 959 W 959
W
Sbjct: 481 W 481
Score = 57 (25.1 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 894 PQDNNIIAIGMEDSSIQIY-NVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P N + G D++ +I+ + +KT L GH+ ++ GL S ++ + D
Sbjct: 458 PNHGNFLLTGAYDNTAKIWTHPGWSPLKT-LAGHEGKVMGLDISLDGQLIATCSYDRTFK 516
Query: 953 VWSTD 957
+W+ +
Sbjct: 517 LWTAE 521
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 77 RKQKYLEALDKRDRAKAVEILVKDLKV 103
R+ + L ++R RA+ + + D +V
Sbjct: 81 RQAEVLAEFERRKRARQINVSTDDSEV 107
>DICTYBASE|DDB_G0278733 [details] [associations]
symbol:aip1 "actin-interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0043327 "chemotaxis to cAMP" evidence=IGI]
[GO:0030041 "actin filament polymerization" evidence=IGI]
[GO:0030010 "establishment of cell polarity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0060187 "cell pole" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0001891 "phagocytic cup" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000152_GR
GO:GO:0008283 eggNOG:COG2319 GO:GO:0006909 GO:GO:0006935
GO:GO:0030042 EMBL:AAFI02000024 GO:GO:0001891 GO:GO:0030864
GO:GO:0006907 GO:GO:0060187 EMBL:U36936 RefSeq:XP_642008.1
ProteinModelPortal:P54686 STRING:P54686 EnsemblProtists:DDB0214916
GeneID:8621739 KEGG:ddi:DDB_G0278733 OMA:INGIAAW
ProtClustDB:CLSZ2430741 Uniprot:P54686
Length = 597
Score = 109 (43.4 bits), Expect = 4.0e-05, Sum P(5) = 4.0e-05
Identities = 56/254 (22%), Positives = 106/254 (41%)
Query: 414 SSDYTASVNRVMWSPDGT-LFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFS 472
+ D+T VN V +SPDG L V K +Y G++L + H G + ++S
Sbjct: 187 AGDFTRFVNCVRFSPDGNKLVTVGADKK-AFVYDGKTGEKLIELNPAQQHTGGIYGCSWS 245
Query: 473 YPNKQLSVVTCGEDRVIKVWDAVTGT--KQYIFEGHESPVYSICPHHKENIQFIFSTATD 530
N + V+T D+ K+WD TG + F + C +++ S
Sbjct: 246 ADNNR--VLTASADKSCKIWDTTTGQCINSFTFGSDVNDQQLGCLWFGDSL---LSVNLA 300
Query: 531 GKIKAWLYDNLG--SRVDYDAPGHSSTM--MAYSADGARLFSCGTNKEGESYLVEWNESE 586
G+I D++ SRV GH+ + +A+ + L+S ++ L++W+ S
Sbjct: 301 GEISTLNLDDVAKPSRV---IKGHNKLVGTIAFDKNAGSLYSASY----DASLLQWDLST 353
Query: 587 GAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASP 646
G + + G ++ + ++ + + +K + SI D QA
Sbjct: 354 G-LATNFTGPAHKNQ-ITSIKINGDQLITCAMDDSVKISSISKKTYGESIGVDSPAQA-- 409
Query: 647 CIRFNKEGILLAVS 660
+ F+ + +++AVS
Sbjct: 410 -VAFSGD-VVVAVS 421
Score = 70 (29.7 bits), Expect = 4.0e-05, Sum P(5) = 4.0e-05
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTK-LKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
+A G + + +++ + E K+K H RI +A+SN + S+ DSQ+ +W+ +
Sbjct: 497 LASGCSNREVIVWSGK--EAKSKGWVNHTARINAVAWSNDSKFVASASLDSQIYIWNVE 553
Score = 47 (21.6 bits), Expect = 4.0e-05, Sum P(5) = 4.0e-05
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 814 GKATTNQAPQLWQPPSGILMTNDISDTNPEDAVPCFALSKND 855
G +Q W+P S + ++S ++ + F LS N+
Sbjct: 430 GGKIVSQTAATWEPTSVAINDTEVSVGGKDNKIHVFTLSGNN 471
Score = 40 (19.1 bits), Expect = 4.0e-05, Sum P(5) = 4.0e-05
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 375 GTNMGDVMLWEVGSRERIAVKSFKV 399
G G++ +W+ +E I ++KV
Sbjct: 76 GDVQGNLRIWDTLQKEHILKATYKV 100
Score = 38 (18.4 bits), Expect = 4.0e-05, Sum P(5) = 4.0e-05
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 192 NPDIKTLFVDHTCGQPNGARAPS 214
NP + ++ +H C APS
Sbjct: 47 NPMVADIYYEHPCQTTVAKYAPS 69
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 133 (51.9 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 54/217 (24%), Positives = 101/217 (46%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI--C 514
L+ + H ++N +A+S P+ Q ++ T GED +K+W+ +G F HE PV ++
Sbjct: 352 LKQQGHSYNMNTVAYS-PDGQ-TIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYS 409
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS-TMMAYSADGARLFSCGTNK 573
P +N+ +FS DG I+A+ + + +P + + +A G + + G+
Sbjct: 410 PVSSQNV--VFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSG-EIIAAGSLD 466
Query: 574 EGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGD-EFMIKFWDM-DNVN 631
E Y+ W+ G + G + V + FD N FLA+ + K W++ ++
Sbjct: 467 SFEIYV--WSVRTGRLTDILSG-HQSPVCELAFDPI-NPFLASASWDKSCKIWNIFEDRE 522
Query: 632 LLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
+ SI + C ++++G VS D I+I
Sbjct: 523 IRESIQHTSDVLT--CA-YSQDGKKFIVSCLDGTIQI 556
Score = 53 (23.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 902 IGMEDSSIQIYNVR--VDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
IG+ D I R DE+ K + T +AF+ +++ G +C++ D
Sbjct: 565 IGLIDGKNDIMGGRGYKDEILAKNNSAGRAFTKIAFTPNGECIIAGGNSKYICIYHID 622
Score = 47 (21.6 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 359 VKSMDFHPVQQILLVVGTNMGDVMLWEV 386
VK++ FH ++ LL+VG + G +L+E+
Sbjct: 276 VKTVCFH-LKSKLLLVGFSTGQFILYEM 302
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 59/259 (22%), Positives = 108/259 (41%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
+ + H V + + P ++L +V + I+VWD GH++ + S+
Sbjct: 57 MSLTGHTSPVESVRLNTP-EEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL-DF 113
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKE 574
H +F+ S + D IK W G Y GHS + + +S DG L S
Sbjct: 114 HPYG-EFVASGSQDTNIKLWDIRRKGCVFRYR--GHSQAVRCLRFSPDGKWLASAA---- 166
Query: 575 GESYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ + V+ W+ + G + + G V VV+F + + + I+FWD++ ++
Sbjct: 167 -DDHTVKLWDLTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVAS 693
+ I+ + G S + FN +G L D+ +++ G R + + +VA
Sbjct: 225 SCIEGEPGPVRS--VLFNPDGCCLYSGCQDS-LRVY----GWEPERCFDVVLVNWGKVAD 277
Query: 694 AAIVKAPAIGT-FGSANAN 711
AI IG F +N +
Sbjct: 278 LAICNDQLIGVAFSQSNVS 296
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 59/259 (22%), Positives = 108/259 (41%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
+ + H V + + P ++L +V + I+VWD GH++ + S+
Sbjct: 57 MSLTGHTSPVESVRLNTP-EEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL-DF 113
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKE 574
H +F+ S + D IK W G Y GHS + + +S DG L S
Sbjct: 114 HPYG-EFVASGSQDTNIKLWDIRRKGCVFRYR--GHSQAVRCLRFSPDGKWLASAA---- 166
Query: 575 GESYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ + V+ W+ + G + + G V VV+F + + + I+FWD++ ++
Sbjct: 167 -DDHTVKLWDLTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVAS 693
+ I+ + G S + FN +G L D+ +++ G R + + +VA
Sbjct: 225 SCIEGEPGPVRS--VLFNPDGCCLYSGCQDS-LRVY----GWEPERCFDVVLVNWGKVAD 277
Query: 694 AAIVKAPAIGT-FGSANAN 711
AI IG F +N +
Sbjct: 278 LAICNDQLIGVAFSQSNVS 296
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 116 (45.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 460 EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTK---QYIFEGHESPVYSICPH 516
+AH G VN + FS P +L + T G DR +K+W+ V G K + G + + SI
Sbjct: 335 DAHDGEVNAVQFS-PGSRL-LATGGMDRRVKLWE-VFGDKCEFKGSLSGSNAGITSI--E 389
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKE 574
++ + + D + W D+ R+ + GHS +++ + D AR+ S G++
Sbjct: 390 FDSAGSYLLAASNDFASRIWTVDDY--RLRHTLTGHSGKVLSAKFLLDNARIVS-GSH-- 444
Query: 575 GESYLVEWN-ESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ L W+ S+ +K + G + + F D+ I+FWD+ + +++
Sbjct: 445 -DRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHF----DK-KIRFWDIRSESIV 498
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKIL 669
++ G + A + N E L + D+ +KI+
Sbjct: 499 REMELLGKITA---LDLNPERTELLSCSRDDLLKII 531
Score = 68 (29.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
D + +A G + S+ I+NV +V+ L K H I +A+S + +V+ S+ +W
Sbjct: 561 DGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAVLW 620
Query: 955 S 955
S
Sbjct: 621 S 621
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 59/259 (22%), Positives = 108/259 (41%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
+ + H V + + P ++L +V + I+VWD GH++ + S+
Sbjct: 57 MSLTGHTSPVESVRLNTP-EEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL-DF 113
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKE 574
H +F+ S + D IK W G Y GHS + + +S DG L S
Sbjct: 114 HPYG-EFVASGSQDTNIKLWDIRRKGCVFRYR--GHSQAVRCLRFSPDGKWLASAA---- 166
Query: 575 GESYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ + V+ W+ + G + + G V VV+F + + + I+FWD++ ++
Sbjct: 167 -DDHTVKLWDLTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVAS 693
+ I+ + G S + FN +G L D+ +++ G R + + +VA
Sbjct: 225 SCIEGEPGPVRS--VLFNPDGCCLYSGCQDS-LRVY----GWEPERCFDVVLVNWGKVAD 277
Query: 694 AAIVKAPAIGT-FGSANAN 711
AI IG F +N +
Sbjct: 278 LAICNDQLIGVAFSQSNVS 296
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 136 (52.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 42/185 (22%), Positives = 80/185 (43%)
Query: 451 DELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPV 510
D+ R + H ++D+A +Y N ++ +C D++I+VW T + +GH + +
Sbjct: 203 DDGRLLATLRGHAAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPLAVLQGHSASI 260
Query: 511 YSI--CPHHKENIQFIFSTATDGKIKAWLYD----NLGSR----VDYDAPGHSSTMMAYS 560
S+ P + +++ ST DG I WL+D + R + PG ++S
Sbjct: 261 TSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGVQMICSSFS 320
Query: 561 ADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEF 620
A G L + T+ Y + E + +H V +QF + +RF++ +
Sbjct: 321 AGGMFLATGSTDHIIRVYFFGSGQPEKISELEFH---TDKVDSIQFSNSSSRFVSGSRDG 377
Query: 621 MIKFW 625
+ W
Sbjct: 378 TARIW 382
Score = 58 (25.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLA-FSNTLNVLVSSGADSQLCVW 954
DN++I + + +++++N ++ L GH+ + L VL S+G D + VW
Sbjct: 426 DNSVIT-AVNNMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVW 484
Query: 955 STDGWEKQASKFLTIPNGRTASALADTR 982
K S F I G+ A+ D +
Sbjct: 485 DLARGVKIRSYFNMI-EGQGHGAVFDCK 511
Score = 54 (24.1 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 750 KSRIWK---LTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALASNAVHKLW 803
K R WK L T PS + D +T ++V+ + + +++ +N K+W
Sbjct: 385 KRREWKSILLDMATRPSGQTLQGVEDKITKLKVTMVAWDRHDNSVITAVNNMTLKVW 441
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 807 RNERNSTGKATTNQAPQLWQPPSGILMTNDISDTNPEDA 845
R+ N T QAP L PP L+ D+ D NP A
Sbjct: 557 RDANNFVLDEQTQQAPHLMPPP--FLV--DV-DGNPHPA 590
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 63/264 (23%), Positives = 109/264 (41%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
+ + H V + + P ++L +V + I+VWD GH++ + S+
Sbjct: 57 MSLTGHTSPVESVRLNTP-EEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL-DF 113
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKE 574
H +F+ S + D IK W G Y GHS + + +S DG L S
Sbjct: 114 HPYG-EFVASGSQDTNIKLWDIRRKGCVFRYR--GHSQAVRCLRFSPDGKWLASAA---- 166
Query: 575 GESYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ + V+ W+ + G + + G V VV+F + + + I+FWD++ ++
Sbjct: 167 -DDHTVKLWDLTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDA----- 688
+ I+ + G S I FN +G L +G + D +R+ R FD
Sbjct: 225 SCIEGEPGPVRS--ILFNPDGCCLY-----SGCQ-----DSLRVYGWEPERCFDVVLVHW 272
Query: 689 SRVASAAIVKAPAIGT-FGSANAN 711
+VA AI IG F +N +
Sbjct: 273 GKVADLAICNNQLIGVAFSQSNVS 296
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 134 (52.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 49/203 (24%), Positives = 90/203 (44%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYI--FEGHESPVYSICPHHKENIQFIFSTATDGKIKAWL 537
+++C D IK+W+ V G ++ + F GH V IC + QF+ S A D +K W
Sbjct: 169 LLSCSMDCKIKLWE-VYGDRRCLRTFIGHSKAVRDIC-FNTAGTQFL-SAAYDRYLKLWD 225
Query: 538 YDNLGSRVDYDAPGHSSTMMAYSADGAR--LFSCGTNKEGESYLVEWNESEGAVKRTY-H 594
+ G + + ++ D + LF G + + +V+W+ G + + Y
Sbjct: 226 TET-GQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMS---DKKIVQWDIRSGEIVQEYDR 281
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEG 654
LG +V + F RF++ D+ ++ W+ D + + A+ + + P + + G
Sbjct: 282 HLG--AVNTIVFVDENRRFVSTSDDKSLRVWEWD-IPVDFKYIAEPSMHSMPAVTLSPNG 338
Query: 655 ILLAVSTNDNGIKILANADGIRL 677
LA + DN I I + RL
Sbjct: 339 KWLACQSMDNQILIFGAQNRFRL 361
Score = 45 (20.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 10/60 (16%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS-NTLNVLVSSGADSQLCVW 954
D + + G + + I++ + ++ ++ K H K G + + + +++ G D + +W
Sbjct: 384 DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 443
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 114 (45.2 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 42/156 (26%), Positives = 68/156 (43%)
Query: 442 VHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY 501
+ ++ G+ L LEI AH + FS +K V TC D+ +K+W++ TG Y
Sbjct: 638 LQVFKAESGERL---LEISAHDDEILCCTFSADDKY--VATCSADKKVKIWNSRTGKCLY 692
Query: 502 IFEGHESPVYSICPHHKENIQFIFSTATDGK-IK--AWLYDNLGSRVDYDAPGHSSTMM- 557
++E H V + C + Q++ +T +D IK L+D GH + +
Sbjct: 693 VYEEHTEQV-NCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMFGHVNAVSH 751
Query: 558 -AYSADGARLFSCGTNKEGESYLVEWNESEGAVKRT 592
+S + + SC T +G L WN RT
Sbjct: 752 CRFSPNDDYIASCST--DGTVKL--WNVHSANELRT 783
Score = 86 (35.3 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 20/122 (16%), Positives = 50/122 (40%)
Query: 836 DISDTNPEDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQ 895
D + E V C + S++ ++ + K+ LF+
Sbjct: 794 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCA 853
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS 955
+ ++A+ + SI+++N++ +GH + + FS+ ++ ++S D + +W
Sbjct: 854 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 913
Query: 956 TD 957
T+
Sbjct: 914 TN 915
Score = 69 (29.3 bits), Expect = 5.7e-05, Sum P(4) = 5.7e-05
Identities = 23/113 (20%), Positives = 47/113 (41%)
Query: 843 EDAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 902
++A+ FA +N + + G + ++N P D + +
Sbjct: 1050 KEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSP-DGSRFSS 1108
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADS-QLCVW 954
D + +I++ V +LKGH+ + AFS + N L+++G D + +W
Sbjct: 1109 TSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPS-NKLLATGDDKGDIRIW 1160
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 906 DSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWS-TDG 958
D+ IQ++N +++E LKGH++ I AF + L+S D + VW+ T G
Sbjct: 1030 DAVIQVWNWQLNEC-VFLKGHKEAIKDFAFLEN-SKLLSWSFDGTVKVWNITTG 1081
Score = 59 (25.8 bits), Expect = 5.7e-05, Sum P(4) = 5.7e-05
Identities = 42/194 (21%), Positives = 78/194 (40%)
Query: 622 IKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGI------KILANADGI 675
I+ W++ +++ +A D G C+ F+ +G L S+ D I K+ ++D +
Sbjct: 867 IELWNIKSLSKVA--DCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAV 924
Query: 676 RLLRTVESRTFDASRVASAAIVKAPAIGTFGSANANVGTSLGERTAPAAAMVGMSNDSRN 735
L++ F V AI I N N S+ +T P +++ S +
Sbjct: 925 --LKSELDVVFHNGEVMILAIYNQKHIQLI---NGNTD-SIIMQTEPQESLICCCCLSED 978
Query: 736 FTDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDNLTAMRVSRLIYTNSGLAILALA 795
K A E I K+ + + S T+++ R +T +++ A
Sbjct: 979 L-----KFAAFGQENGAI-KVLRLLDGRVLTSREA--YRTSVQHCR--FTTDCQTLISSA 1028
Query: 796 SNAVHKLWKWPRNE 809
+AV ++W W NE
Sbjct: 1029 HDAVIQVWNWQLNE 1042
Score = 38 (18.4 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 337 QSSYSTDDLPKTVVMTLNQGSAVKSMDFHPVQQILLV 373
++SY D + V+TL + VK + + +L+
Sbjct: 21 KTSYIMDHMVADQVLTLQEEEKVKQQNTQKERAAMLI 57
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 134 (52.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 49/203 (24%), Positives = 90/203 (44%)
Query: 480 VVTCGEDRVIKVWDAVTGTKQYI--FEGHESPVYSICPHHKENIQFIFSTATDGKIKAWL 537
+++C D IK+W+ V G ++ + F GH V IC + QF+ S A D +K W
Sbjct: 172 LLSCSMDCKIKLWE-VYGDRRCLRTFIGHSKAVRDIC-FNTAGTQFL-SAAYDRYLKLWD 228
Query: 538 YDNLGSRVDYDAPGHSSTMMAYSADGAR--LFSCGTNKEGESYLVEWNESEGAVKRTY-H 594
+ G + + ++ D + LF G + + +V+W+ G + + Y
Sbjct: 229 TET-GQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMS---DKKIVQWDIRSGEIVQEYDR 284
Query: 595 GLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEG 654
LG +V + F RF++ D+ ++ W+ D + + A+ + + P + + G
Sbjct: 285 HLG--AVNTIVFVDENRRFVSTSDDKSLRVWEWD-IPVDFKYIAEPSMHSMPAVTLSPNG 341
Query: 655 ILLAVSTNDNGIKILANADGIRL 677
LA + DN I I + RL
Sbjct: 342 KWLACQSMDNQILIFGAQNRFRL 364
Score = 45 (20.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 10/60 (16%), Positives = 29/60 (48%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS-NTLNVLVSSGADSQLCVW 954
D + + G + + I++ + ++ ++ K H K G + + + +++ G D + +W
Sbjct: 387 DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 446
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 144 (55.7 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 56/212 (26%), Positives = 94/212 (44%)
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHH 517
E AH G+VN L+ +L ++T G+D + +W T GH SPV S+ +
Sbjct: 10 EFVAHSGNVNCLSIGKKTSRL-LLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNS 68
Query: 518 KENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMA--YSADGARLFSCGTNKEG 575
+E + + + A+ G IK W D S++ GH S A + G L S G++
Sbjct: 69 EEVL--VLAGASSGVIKLW--DLEESKMVRAFTGHRSNCSAVEFHPFGEFLAS-GSS--- 120
Query: 576 ESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLAS 635
++ L W+ + +TY G R + ++F ++ G + ++K WD+ LL
Sbjct: 121 DTNLRVWDTRKKGCIQTYKG-HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 636 IDADGGLQASPCIRFNKEGILLAVSTNDNGIK 667
G S + F+ LLA + D +K
Sbjct: 180 FKCHEGPIRS--LDFHPLEFLLATGSADRTVK 209
Score = 44 (20.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 20/62 (32%), Positives = 24/62 (38%)
Query: 683 SRTFDASRVASAAIVKAPAIGTFGSANANVGTSLGERTAPAAAMVGMSNDSRNFTDVKPK 742
S T R SAA V+ + S V + RT+PA M N S N T
Sbjct: 736 SVTLRRQRRNSAARVRPVLLSQATSHECPVTSVRPLRTSPARVMPTKLNQSVNMTSDTSH 795
Query: 743 IA 744
IA
Sbjct: 796 IA 797
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 127 (49.8 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 458 EIEA-HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
EI+A H S+ D+AFS + + VTC +D ++K+W+ G ++ + GH V S C
Sbjct: 171 EIDAAHTESIRDMAFSSNDSKF--VTCSDDNILKIWNFSNGKQERVLSGHHWDVKS-CDW 227
Query: 517 HKENIQFIFSTATDGKIKAW 536
H E + I S + D +K W
Sbjct: 228 HPE-MGLIASASKDNLVKLW 246
Score = 55 (24.4 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 13/66 (19%), Positives = 34/66 (51%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNV--RVDE-VKTKLKGHQKRITGLAFSNTLNVLVSSGADS 949
HP + ++ + D S++ +++ ++E + T H K IT L+++ ++ ++ D
Sbjct: 313 HPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDR 372
Query: 950 QLCVWS 955
+ W+
Sbjct: 373 TIRFWT 378
Score = 39 (18.8 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 372 LVVGTNMGDVMLWEVGS 388
LVV T G+ LW S
Sbjct: 108 LVVATYSGEFSLWNASS 124
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 124 (48.7 bits), Expect = 0.00073, P = 0.00073
Identities = 46/183 (25%), Positives = 76/183 (41%)
Query: 486 DRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRV 545
D+ IKVWD T +Y E H V ++C Q++FS + D IK W D R
Sbjct: 561 DKTIKVWDLKTLECKYTLESHARAVKTLCISG----QYLFSGSNDKTIKVW--DLKTFRC 614
Query: 546 DYDAPGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQ 605
+Y GH+ + G L+S +K + WN T G + +V
Sbjct: 615 NYTLKGHTKWVTTICILGTNLYSGSYDKT----IRVWNLKSLECSATLRGHDRWVEHMVI 670
Query: 606 FDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNG 665
D K F A+ D IK WD++ + +++ G C+ ++ + ++D
Sbjct: 671 CD--KLLFTASDDN-TIKIWDLETLRCNTTLE--GHNATVQCLAVWEDKKCVISCSHDQS 725
Query: 666 IKI 668
I++
Sbjct: 726 IRV 728
Score = 117 (46.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 48/208 (23%), Positives = 86/208 (41%)
Query: 429 DGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRV 488
D LF S + + +Y Y + ++ H G V + + N Q + + D
Sbjct: 470 DNLLF-TGCSDNSIRVYDYKS-QNMECVQTLKGHEGPVESICY---NDQY-LFSGSSDHS 523
Query: 489 IKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYD 548
IKVWD + EGH+ PV+++ + K ++FS ++D IK W L + Y
Sbjct: 524 IKVWDLKKLRCIFTLEGHDKPVHTVLLNDK----YLFSGSSDKTIKVWDLKTLECK--YT 577
Query: 549 APGHSSTMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
H+ + G LFS G+N + + W+ T G K + T
Sbjct: 578 LESHARAVKTLCISGQYLFS-GSN---DKTIKVWDLKTFRCNYTLKGHTKWVTTICILGT 633
Query: 609 TKNRFLAAGDEFMIKFWDMDNVNLLASI 636
N + + D+ I+ W++ ++ A++
Sbjct: 634 --NLYSGSYDK-TIRVWNLKSLECSATL 658
Score = 68 (29.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 897 NNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWST 956
+ ++ +D++I+I+++ T L+GH + LA ++S D + VW
Sbjct: 672 DKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW-- 729
Query: 957 DGW 959
GW
Sbjct: 730 -GW 731
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTD 957
G D +I+++N++ E L+GH + + + + L L ++ D+ + +W +
Sbjct: 638 GSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKL--LFTASDDNTIKIWDLE 690
>ZFIN|ZDB-GENE-041024-4 [details] [associations]
symbol:wdfy1 "WD repeat and FYVE domain containing 1"
species:7955 "Danio rerio" [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000306
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF01363
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00064 SMART:SM00320
ZFIN:ZDB-GENE-041024-4 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 CTD:57590 HOVERGEN:HBG054128 EMBL:BC083271
IPI:IPI00500055 RefSeq:NP_001007058.1 UniGene:Dr.78645
ProteinModelPortal:Q5XJM8 STRING:Q5XJM8 PRIDE:Q5XJM8 GeneID:474326
KEGG:dre:474326 InParanoid:Q5XJM8 NextBio:20850392
ArrayExpress:Q5XJM8 Bgee:Q5XJM8 Uniprot:Q5XJM8
Length = 410
Score = 99 (39.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 458 EIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQY---IFEGHESPVYSIC 514
+IE H VN A P K+ V+T EDR I+VW + QY I+ SP +
Sbjct: 19 KIEGHSDGVN-AAVLIP-KEDGVITASEDRTIRVW-LKRDSGQYWPSIYHTVSSPCSCVS 75
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDY--DAPGHSSTM--MAYSADGARLFSCG 570
HH+ + IF +G + +L +++++ P H + + + +S + L S G
Sbjct: 76 YHHES--RRIFIGQDNGAVVEFLISEDLNKMNHVKTYPAHQNRVSDLLFSLESQWLVSTG 133
Query: 571 TNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT-TKNRFLA--AGDEFMIKFWDM 627
+K + W ++ H G + +Q+D T++ F+ +G ++K D
Sbjct: 134 HDKS-----ISWMSTQSGSMLGRHSFGSWA-SCLQYDNDTQHAFVGDYSGQITLLKL-DE 186
Query: 628 DNVNLLASIDADGG 641
+ +++ ++ G
Sbjct: 187 HSCSVITTLKGHEG 200
Score = 80 (33.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 903 GMEDSSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEK 961
G D S+ ++++ + +T L +GH +++ L + LVS AD + VW+ D +
Sbjct: 217 GASDHSVIMWDIGGRQGRTLLLQGHHEKVQALRYLPLTRQLVSCSADGGITVWNMDTTRQ 276
Query: 962 QASKFL 967
+A ++L
Sbjct: 277 EAPQWL 282
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDFKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 117 (46.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVQDISFDHTGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 61 (26.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I+++++ L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DFKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|O93277 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF020054 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 IPI:IPI00581678
RefSeq:NP_001004402.1 UniGene:Gga.2409 ProteinModelPortal:O93277
STRING:O93277 PRIDE:O93277 GeneID:422842 KEGG:gga:422842
NextBio:20825413 Uniprot:O93277
Length = 609
Score = 95 (38.5 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 415 SDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYP 474
SD+T VN V +SPDG F A + + +Y G+++ +AH G + +++S
Sbjct: 188 SDHTRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGGKAHDGGIYAISWSPD 247
Query: 475 NKQLSVVTCGEDRVIKVWD 493
+ QL ++ D+ K+WD
Sbjct: 248 SSQL--LSASGDKTAKIWD 264
Score = 73 (30.8 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 502 IFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSA 561
+ +GH + + H +I+S + DG I W D G + GH++ + +
Sbjct: 317 VIKGHSKSIQCLTVHKNGGKSYIYSGSNDGHINYWDSDT-GENDGFSGKGHTNQVSRMAV 375
Query: 562 DGA-RLFSC 569
D +L +C
Sbjct: 376 DEMDQLVTC 384
Score = 59 (25.8 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVDEVKTKLK-GHQ-KRITGLAFSNTLNVLVSSGADSQLCV 953
DN A G D + ++ V E + K+ H+ ++GLA+ + + LV++ D+ +
Sbjct: 545 DNEHFASGGMDMMVYVWTVSDPETRIKIPDAHRLHHVSGLAWLDE-HTLVTTSHDASVKE 603
Query: 954 WS 955
WS
Sbjct: 604 WS 605
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
+ D +A+ + + +++V V+ + GH ++ +A+S S G D +
Sbjct: 499 YSHDGAFLAVCDANKVVTVFSVPDGYVEHNVFYGHHAKVVCIAWSPDNEHFASGGMDMMV 558
Query: 952 CVWS 955
VW+
Sbjct: 559 YVWT 562
>UNIPROTKB|F1NUL8 [details] [associations]
symbol:WDR77 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060770 "negative
regulation of epithelial cell proliferation involved in prostate
gland development" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GeneTree:ENSGT00390000010711 EMBL:AADN02044988
IPI:IPI00923799 Ensembl:ENSGALT00000002188 ArrayExpress:F1NUL8
Uniprot:F1NUL8
Length = 346
Score = 97 (39.2 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFS-NTLNVLVSSGADSQL 951
HPQ+++I A+G E ++ + + + + H +R+TG AFS ++ +L S D +
Sbjct: 225 HPQESDIFALGDESGTVALVDTKNPDSALSSIVHARRVTGFAFSAHSSPLLASISEDCTV 284
Query: 952 CVWSTDGWEKQASK-FLTIPNGRTASALADTRVQFHLDQTHLLAVHETQIAIYEAPKLEC 1010
V ++D E S+ G + S +D + + H + H I EA + C
Sbjct: 285 AVLNSDLSEVFRSRSHRDFVKGLSWSP-SDNALLTTVGWDHQVLHHTVPIPTGEASGINC 343
Query: 1011 LKQ 1013
+K+
Sbjct: 344 VKE 346
Score = 61 (26.5 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 481 VTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSI--CPHHKENIQFIFSTATDGKIKAW 536
V+ G D +KVWD + + H V + CP K+ I F+ S A D +I W
Sbjct: 139 VSGGRDFSVKVWDLPQQAVLHSYRAHSDAVTCVAACPG-KDTI-FL-SCAEDERILLW 193
Score = 59 (25.8 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 372 LVVGTNMGDVMLWEVGSRERIAVKSFKVWE 401
++VG++ G V LWE+ +E + V F +E
Sbjct: 92 ILVGSDSGAVELWELDEKETLIVNKFCKYE 121
Score = 53 (23.7 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWD 493
AH +V +A + P K ++C ED I +WD
Sbjct: 163 AHSDAVTCVA-ACPGKDTIFLSCAEDERILLWD 194
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 146 (56.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 88/402 (21%), Positives = 161/402 (40%)
Query: 426 WSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGE 485
+SPD S V L+ G +R E+E H +N F+ +++ + TC
Sbjct: 668 FSPDDRHIATCASDKKVKLWNVERGVLIRE-FEVE-HEEQINHCQFTNTGRRVLLATCSN 725
Query: 486 DRVI--KVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYD--NL 541
D+ K+W+ T Q GH PV C N ++ ++++DG +K + N
Sbjct: 726 DKFTNTKLWNPNKKTSQNTMFGHMEPVNHCC--FSPNDLYLATSSSDGSLKLFEVSSANE 783
Query: 542 GSRVDYDA--PGHSSTMMA------YSADGARLFSCGTNKEGESYLVEWNESEGAVKRTY 593
+D D+ P + A +SADG+++ N ++ + S+ ++
Sbjct: 784 WKSIDVDSFFPESDEEIKAMVKCSTWSADGSQIICAARNTV---FVFDVETSDLLLE--- 837
Query: 594 HGLGKRSVGVVQF-DTTKNRFLAAG--DEFMIKFWDMDNVNLLASIDADGGLQASPCIRF 650
L + +QF N L A + ++ W+ ++ A + G L C++F
Sbjct: 838 --LKTSRLSTIQFCHACPNSSLLAVALSHYTVELWNFESSKKKA--ECSGHLSWVHCVQF 893
Query: 651 NKEGILLAVSTNDNGIKILANADGIRLLRTVE-SRTFDASRVASAAIVKAP-AIGTFGSA 708
+ +G LL S++D I+ L D + V R D S A + AP +
Sbjct: 894 SPDGSLLLSSSDDQTIR-LWETDRVHTSSAVALKRDTDVLFSHSDATIIAPDSSNRLQVL 952
Query: 709 NANVGTSLGERTAPAAAMVGMSNDSRNFTDVKPKIADEAVEKSRIWKLTEITEPSQCRSL 768
+ + G + E + ++ + S SRN V D V+ + E+ PS S+
Sbjct: 953 SGSTGAVVLE-SEELSSRIRCSCISRNAAFVALGSEDGTVQ------VIEV--PSSKASV 1003
Query: 769 RLPDNLTAMRVSRLIYTNS-GLAILALASNAVHKLWKWPRNE 809
+L + V +T+ + I + + + +WKW E
Sbjct: 1004 KLSGHTKT--VHHCQFTDDCEILITSSEDSTIRVVWKWRTGE 1043
Score = 96 (38.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 900 IAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQL-CVW 954
+A+G ED ++Q+ V + KL GH K + F++ +L++S DS + VW
Sbjct: 982 VALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVW 1037
Score = 89 (36.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 417 YTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNK 476
+ +V +S DG+ + + ++ G++L LE++AH V AFS P+
Sbjct: 617 HQGAVYYACFSKDGSKIASCGASKALRVFKSTSGEKL---LELQAHEEDVLCCAFS-PDD 672
Query: 477 QLSVVTCGEDRVIKVWDAVTGTKQYIFE-GHESPVYSICPHHKENIQFIFSTATDGKI-- 533
+ + TC D+ +K+W+ G FE HE + + C + + +T ++ K
Sbjct: 673 R-HIATCASDKKVKLWNVERGVLIREFEVEHEEQI-NHCQFTNTGRRVLLATCSNDKFTN 730
Query: 534 -KAW 536
K W
Sbjct: 731 TKLW 734
Score = 43 (20.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 896 DNNIIAIGMEDSSIQIYNVRVD---------EVKTKLKG-HQKRITGLAFSNTLNVLVSS 945
DN +A G ++ I+++++ +D + K + H +T L FS VLVS+
Sbjct: 1149 DNKRLATGDDNGEIRLWSM-LDGALLKICSRDTKDSMDSYHGGWVTDLHFSPDNRVLVST 1207
Query: 946 GADSQLCVWSTDGWE 960
G + WS + E
Sbjct: 1208 GG--YIKWWSVESGE 1220
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 132 (51.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 50/218 (22%), Positives = 98/218 (44%)
Query: 462 HVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGT---KQY----IFEGHESPVYSIC 514
H +N L F +PN +++CG D +IK+W ++ T KQY IF+GH PV I
Sbjct: 212 HKKGINRLRF-FPNSGHLLLSCGNDNLIKLW-SIYNTFQGKQYQLLRIFKGHNLPVKDII 269
Query: 515 PHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARL--FSCG-T 571
++ +F+ S D I+ W G + ++ ++ + F G +
Sbjct: 270 -FNQSGERFL-SCGYDKYIRLW-DTKTGEMIKSIKLKSIPNVLLFNPNNKNNTEFIVGLS 326
Query: 572 NKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVN 631
N E Y + ++ H G S+ ++ ++F+++ D+ ++ W +N
Sbjct: 327 NFTIEHYDFNSIQYTNPIQIYDHHQG--SINDLK-SLGLDKFISSSDDKTVRIWSWQ-IN 382
Query: 632 LLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKIL 669
+ + D + PCI+ + + +A+ + DN IK++
Sbjct: 383 IPIKVITDPSQHSIPCIKIHPQANYIALQSMDNSIKVI 420
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 57/289 (19%), Positives = 114/289 (39%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
+ KVW+ + +L +T SV + + G L + + L+ + G + +R
Sbjct: 131 TIKVWDYETGDF--ERTLKG-HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
+ H +V+ +A PN +V+ D+ IK+W+ TG F GH V + P
Sbjct: 188 ---MHGHDHNVSSVAIM-PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGA-----RLFSCG 570
+ + I S + D ++ W+ + + H ++++ + +
Sbjct: 243 NQDGTL--IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 571 TNKEGES--YLVE---------WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDE 619
T K G+ +L+ W+ S G T G GV+ F + L+ D+
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKFILSCADD 359
Query: 620 FMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
++ WD N + +++A S + F+K + + D +K+
Sbjct: 360 KTLRVWDYKNKRCMKTLNAHEHFVTS--LDFHKTAPYVVTGSVDQTVKV 406
Score = 115 (45.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 484 GEDRVIKVWDAVTGTKQYIFEGHESPVYSICPHHKENIQFIFSTATDGKIKAWLYDNLGS 543
G+ R K W ++Y GH SPV + H ++ + S + D IK W Y+ G
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWDYET-GD 141
Query: 544 RVDYDAPGHSSTMMAYSAD--GARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSV 601
+ GH+ ++ S D G L SC + + W+ RT HG +V
Sbjct: 142 -FERTLKGHTDSVEDISFDHSGKLLASCSADMT----IKLWDFQGFECIRTMHG-HDHNV 195
Query: 602 GVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASIDADGGLQASPCIRFNKEGILLAVST 661
V + ++A + IK W++ + + G + +R N++G L+A +
Sbjct: 196 SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCS 253
Query: 662 NDNGIKI 668
ND +++
Sbjct: 254 NDQTVRV 260
Score = 62 (26.9 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 903 GMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVWSTDGWEKQ 962
G D +I++++V L GH + G+ F + ++S D L VW D K+
Sbjct: 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW--DYKNKR 371
Query: 963 ASKFL 967
K L
Sbjct: 372 CMKTL 376
Score = 61 (26.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 905 EDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLCVW 954
+D ++++++ + L H+ +T L F T +V+ D + VW
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 54 (24.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 895 QDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQ 927
QD +IA D +++++ V E K +L+ H+
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHE 276
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 133 (51.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 49/211 (23%), Positives = 90/211 (42%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
+ + H V + + P ++L +V + I+VWD GH++ + S+
Sbjct: 57 MSLTGHTSPVESVRLNTP-EEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSL-DF 113
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGARLFSCGTNKE 574
H +F+ S + D IK W G Y GHS + + +S DG L S
Sbjct: 114 HPYG-EFVASGSQDTNIKLWDIRRKGCVFRYR--GHSQAVRCLRFSPDGKWLASAA---- 166
Query: 575 GESYLVE-WNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLL 633
+ + V+ W+ + G + + G V VV+F + + + I+FWD++ ++
Sbjct: 167 -DDHTVKLWDLTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV 224
Query: 634 ASIDADGGLQASPCIRFNKEGILLAVSTNDN 664
+ I+ + G S + FN +G L D+
Sbjct: 225 SCIEGEPGPVRS--VLFNPDGCCLYSGCQDS 253
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 133 (51.9 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 48/159 (30%), Positives = 66/159 (41%)
Query: 396 SFKVWELGACSMPLQASLSSDYTASVNRVMWSPDGTLFGVAYSKHIVHLYTYHGGDELRN 455
S K+W L + P+ A + +T V RVMW P G G L+ +E+
Sbjct: 303 SVKLWSLDS-DEPV-ADIEG-HTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEI-- 357
Query: 456 HLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICP 515
L E H V D+AF + + L+ T G D +VWD TG EGH +Y I
Sbjct: 358 -LHQEGHSMGVYDIAF-HQDGSLAG-TGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI-- 412
Query: 516 HHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSS 554
+ N I + + D K W D R Y P H +
Sbjct: 413 NFSPNGYHIATGSGDNTCKVW--DLRQRRCVYTIPAHQN 449
Score = 51 (23.0 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 894 PQDNNIIAIGMEDSSIQIY-NVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
P + + G D++ +I+ + +KT L GH+ ++ GL S+ ++ + D
Sbjct: 458 PIHGDFLLTGAYDNTAKIWTHPGWSPLKT-LAGHEGKVMGLDISSDGQLIATCSYDRTFK 516
Query: 953 VWSTD 957
+W +
Sbjct: 517 LWMAE 521
Score = 37 (18.1 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 77 RKQKYLEALDKRDRAKAVEILVKDLKV 103
R+ + L ++R RA+ + + D +V
Sbjct: 81 RQAEVLAEFERRKRARQINVSTDDSEV 107
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 132 (51.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 50/223 (22%), Positives = 95/223 (42%)
Query: 451 DELRNHLEI-EAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESP 509
D L +++ H G V F + L ++C ED I+ WD + T +++GH P
Sbjct: 325 DNLGTEMKVLRGHCGPVYSTRFLADSSGL--LSCSEDMSIRYWDLGSFTNTVLYQGHAYP 382
Query: 510 VYS--ICPHHKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSADGAR 565
V+ I PH ++ F S + D + W +D Y GH + + + + +
Sbjct: 383 VWDLDISPH---SLYFA-SASHDRTARLWSFDRTYPLRIY--AGHLADVDCVKFHPNSNY 436
Query: 566 LFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFW 625
L + T+K W+ +G R + G + V + F +AG++ +K W
Sbjct: 437 LATGSTDKTVRL----WSTQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLW 491
Query: 626 DMDNVNLLASIDADGGLQASPCIRFNKEGILLAVSTNDNGIKI 668
D+ + L + G + F+ + L+A ++ DN +++
Sbjct: 492 DLASGTLYKELR--GHTDNITSLTFSPDSSLVASASMDNSVRV 532
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 134 (52.2 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 66/287 (22%), Positives = 117/287 (40%)
Query: 457 LEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFEGHESPVYSICPH 516
L+ + H+ S+N LA+S P+ Q +VT +D IKVWD +G F H S V + C
Sbjct: 332 LKQQGHLDSMNALAYS-PDGQ-RIVTAADDGKIKVWDVKSGFCLVTFTEHTSGV-TACQF 388
Query: 517 HKENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTMMAYSADGARLFSCGTNKEGE 576
K+ +F+++ DG ++AW + + AP S + + D + C + +
Sbjct: 389 SKKG-NVLFTSSLDGSVRAWDLIRYRNFRTFTAPSRLS-FSSLAVDPSGEVICAGSPDSF 446
Query: 577 SYLVEWNESEGAVKRTYHGLGKRSVGVVQFDTTKNRFLAAGDEFMIKFWDMDNVNLLASI 636
V W+ G + G + V + F AA ++ FW + + +A I
Sbjct: 447 DIHV-WSVQTGQLLDQLSG-HEGPVSALAF--------AADGNHLLTFWSVADAVQVAGI 496
Query: 637 DADGGLQASPCIRFNKEGILLAVSTNDNGIKILANADGIRLLRTVESRTFDASRVASAAI 696
D + I ++ A T I +ADG +L S+ V + ++
Sbjct: 497 DGRRDISGGRKIT-DRTTAANAAGTKSFHC-ITYSADGSCILAAGNSKYICLYDVLTGSL 554
Query: 697 VKAPAIGTFGSANANVGTSLGERTAPAAAMVGMSNDSRNFTDVKPKI 743
VK + S + L R A G+ +++ +D + +I
Sbjct: 555 VKKYTVSVNTSLDGTQ-EYLNSRDLTEAGARGLIDETGEASDHEERI 600
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 93 (37.8 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 28/96 (29%), Positives = 50/96 (52%)
Query: 894 PQDNNIIAIGMED-SSIQIYNVRVDEVKTKL-KGHQKRITGLAFSNTLNVLVSSGADSQL 951
P DN ++A G +D S + ++NV+ E++TK+ + H+ +T +A++ V+ G Q
Sbjct: 264 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 323
Query: 952 CVWSTDG-----WEKQASKFL-TIPNGRTASALADT 981
DG WE + L + +G+T A +DT
Sbjct: 324 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 358
Score = 81 (33.6 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 32/142 (22%), Positives = 68/142 (47%)
Query: 70 MKIFFEIRKQKYLEALDKRDRAKAVEILVKDLKVFSAFNEDLFKEITQLLTLENFRDNEQ 129
+++ F + +QKYLE L+ +A+++L +L +N + ++ L + D
Sbjct: 62 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 120
Query: 130 LSKY-GDTKSARGIMLAELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQLC-- 186
+++ G ++R +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 171
Query: 187 KNPR--ANPDIKTLFVDHTCGQ 206
N + +N D +L +DH C +
Sbjct: 172 HNTKLDSNLDSVSLLIDHVCSR 193
Score = 67 (28.6 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 551 GHSS--TMMAYSADGARLFSCGTNKEGESYLVEWNESEGAVKRTYHGLGKRSVGVVQFDT 608
GH+ + +A+S D L +CG + E +L WN G ++ + S+ V ++
Sbjct: 252 GHAYGVSYIAWSPDDNYLVACGPDDCSELWL--WNVQTGELRTKMSQSHEDSLTSVAWNP 309
Query: 609 TKNRFLAAGDEFMIKFWDMDNVNLLAS 635
RF+ G D+D NLL S
Sbjct: 310 DGKRFVTGGQRGQFYQCDLDG-NLLDS 335
Score = 64 (27.6 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTL-NVLVSSGADSQL 951
H +D IA G ED + I++ R + +L GH + + ++++ + +++ S+ D +
Sbjct: 434 HNED--FIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTV 491
Query: 952 CVW 954
+W
Sbjct: 492 RIW 494
Score = 49 (22.3 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 649 RFNKEGILLAVSTNDNGIKIL-ANADG--IRLLRTVESRTFDASRVA 692
+F+ +G LA + D + I + D ++LL+T+E + S +A
Sbjct: 215 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIA 261
Score = 46 (21.3 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 737 TDVKPKIADEAVEKSRIWKLTEITEPSQCRSLRLPDN-LTAMRVSRLIYTNSGLAILALA 795
+D K +A + ++ R + ++T+ R++ D+ + + +S+ N LA+L +A
Sbjct: 348 SDGKTVLASDTHQRIRGYNFEDLTD----RNIVQEDHPIMSFTISK----NGRLALLNVA 399
Query: 796 SNAVHKLW 803
+ VH LW
Sbjct: 400 TQGVH-LW 406
>UNIPROTKB|F1RLI4 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 OMA:DGIIACH EMBL:CU972447
Ensembl:ENSSSCT00000015514 Uniprot:F1RLI4
Length = 952
Score = 99 (39.9 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 30/120 (25%), Positives = 51/120 (42%)
Query: 893 HPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLKGHQKRITGLAFSNTLNVLVSSGADSQLC 952
H + I+ + ++D SI + ++ ++ + GHQ +I +AFS L+S+ D +
Sbjct: 589 HRDSSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISASMDCSIR 648
Query: 953 VWSTDGWEKQASKFL-TIPNGRTASALADTRVQFHLDQTHLLAVHETQIAIYEAPKLECL 1011
W S L + P T S D H+D HL + I++Y L L
Sbjct: 649 TWDLPSGCLIDSFLLDSAPLNVTMSPTGDFLATSHVD--HLGIYLWSNISLYSVVSLRPL 706
Score = 81 (33.6 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 25/89 (28%), Positives = 48/89 (53%)
Query: 452 ELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVW--DAVTGTKQYI-FE-GHE 507
+L N + AH ++ L F + ++ +VT G D +++W D TG + + F GH
Sbjct: 323 KLINQMR-NAHSTAIAGLTFLH--REPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHS 379
Query: 508 SPVYSICPHHKENIQFIFSTATDGKIKAW 536
+P+ I ++ +N Q I S + DG ++++
Sbjct: 380 APLTKI-RYYGQNGQQILSASQDGTLQSF 407
Score = 52 (23.4 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 365 HPVQQI-LLVVGTNMGDVMLWEVGSRERIAVKSFKVWELGACSMPLQASLSSDYTA 419
HP + +++G+ G + LW V S + + +F W+ G + LQ + + D A
Sbjct: 212 HPSTYLNKILLGSEQGSLQLWNVKSNKLLY--TFAGWKTGVTA--LQQAPAVDVVA 263
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 113 (44.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 461 AHVGSVNDLAFSYPNKQLSVVTCGEDRVIKVWDAVTGTKQYIFE--GHESPVYSICPHHK 518
+H ++D Y +L+ TC DR +K++D G + I + GHE PV+ + H
Sbjct: 11 SHEDMIHDAQMDYYGTRLA--TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP 68
Query: 519 ENIQFIFSTATDGKIKAWLYDNLGSRVDYDAPGHSSTM--MAYSA-DGARLFSCGTNKEG 575
+ S + D K+ W +N ++ GH S++ + ++ D + +CG++
Sbjct: 69 MYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGA 128
Query: 576 ESYLVEWNESEGAVKR 591
S L + VK+
Sbjct: 129 ISLLTYTGLGQWEVKK 144
Score = 109 (43.4 bits), Expect = 0.00052, P = 0.00052
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 430 GTLFGVAYSKHIVHLYTYHGGDELRNHLEIEAHVGSVNDLAFSYPNKQLSVVTCGEDRVI 489
GT S V ++ G ++ ++ H G V +A+++P + +C DR +
Sbjct: 25 GTRLATCSSDRSVKIFDVRNGGQILI-ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83
Query: 490 KVWDAVTGT--KQYIFEGHESPVYSIC--PHHKENIQFIFSTATDGKIKAWLYDNLG 542
+W GT K + GH+S V S+C PH I + ++DG I Y LG
Sbjct: 84 IIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLI--LACGSSDGAISLLTYTGLG 138
WARNING: HSPs involving 155 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1015 980 0.00098 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 405
No. of states in DFA: 630 (67 KB)
Total size of DFA: 477 KB (2223 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 91.69u 0.19s 91.88t Elapsed: 00:00:05
Total cpu time: 91.76u 0.19s 91.95t Elapsed: 00:00:05
Start: Mon May 20 20:17:13 2013 End: Mon May 20 20:17:18 2013
WARNINGS ISSUED: 2