Query 001779
Match_columns 1014
No_of_seqs 334 out of 1255
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 09:07:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001779.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001779hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1879 UDP-glucose:glycoprote 100.0 5E-200 1E-204 1766.6 61.1 902 6-982 545-1457(1470)
2 cd06432 GT8_HUGT1_C_like The C 100.0 3.7E-54 8E-59 466.0 21.3 248 707-954 1-248 (248)
3 PF06427 UDP-g_GGTase: UDP-glu 100.0 8.1E-54 1.8E-58 450.4 19.5 205 380-585 1-211 (211)
4 cd00505 Glyco_transf_8 Members 100.0 4.3E-40 9.2E-45 355.4 20.5 235 707-952 1-244 (246)
5 PRK15171 lipopolysaccharide 1, 100.0 4.9E-38 1.1E-42 353.8 19.7 234 705-953 24-271 (334)
6 cd06431 GT8_LARGE_C LARGE cata 100.0 5.3E-36 1.1E-40 329.6 19.6 257 707-976 1-276 (280)
7 cd04194 GT8_A4GalT_like A4GalT 100.0 1.3E-35 2.8E-40 320.2 19.1 229 707-952 1-246 (248)
8 cd06430 GT8_like_2 GT8_like_2 100.0 8E-35 1.7E-39 320.3 22.3 260 707-978 1-289 (304)
9 cd06429 GT8_like_1 GT8_like_1 100.0 2E-34 4.3E-39 313.4 17.8 227 707-967 1-255 (257)
10 COG1442 RfaJ Lipopolysaccharid 100.0 5.2E-34 1.1E-38 317.2 18.4 239 706-960 2-252 (325)
11 PLN02718 Probable galacturonos 100.0 8E-33 1.7E-37 321.7 15.8 262 703-977 310-598 (603)
12 PLN02523 galacturonosyltransfe 100.0 5E-31 1.1E-35 303.4 17.8 261 704-977 246-554 (559)
13 PLN02829 Probable galacturonos 100.0 4.3E-29 9.3E-34 289.8 15.7 260 707-977 331-634 (639)
14 PF01501 Glyco_transf_8: Glyco 100.0 4E-29 8.7E-34 265.7 13.7 231 708-953 1-247 (250)
15 PLN02742 Probable galacturonos 100.0 1.6E-28 3.5E-33 282.7 17.5 261 706-977 226-530 (534)
16 PLN02870 Probable galacturonos 100.0 5.9E-29 1.3E-33 285.7 13.4 263 707-977 206-527 (533)
17 PLN02659 Probable galacturonos 100.0 9E-29 1.9E-33 284.3 14.1 260 710-977 210-528 (534)
18 PLN02769 Probable galacturonos 100.0 9.6E-29 2.1E-33 288.9 14.5 262 705-976 328-624 (629)
19 PLN02867 Probable galacturonos 100.0 2.9E-28 6.2E-33 281.2 15.0 258 710-976 214-529 (535)
20 PLN02910 polygalacturonate 4-a 99.9 2.4E-27 5.3E-32 274.7 15.3 260 707-977 345-652 (657)
21 cd02537 GT8_Glycogenin Glycoge 99.9 7.1E-22 1.5E-26 213.4 17.6 202 709-953 3-213 (240)
22 PLN00176 galactinol synthase 99.9 3.6E-21 7.7E-26 215.4 19.3 246 713-978 30-302 (333)
23 cd06914 GT8_GNT1 GNT1 is a fun 99.7 5.1E-17 1.1E-21 178.4 16.5 204 713-956 7-242 (278)
24 cd02515 Glyco_transf_6 Glycosy 97.2 0.0085 1.8E-07 66.0 15.4 220 703-943 32-263 (271)
25 COG5597 Alpha-N-acetylglucosam 97.0 0.0002 4.3E-09 78.9 1.1 149 782-943 150-333 (368)
26 PF03414 Glyco_transf_6: Glyco 96.9 0.018 4E-07 65.1 14.9 224 703-943 97-328 (337)
27 KOG1879 UDP-glucose:glycoprote 96.6 1.2 2.6E-05 57.9 28.4 384 36-460 327-746 (1470)
28 PF11051 Mannosyl_trans3: Mann 96.0 0.014 3E-07 65.0 7.3 109 709-825 4-114 (271)
29 PF03407 Nucleotid_trans: Nucl 94.8 0.077 1.7E-06 56.3 7.5 139 789-954 54-209 (212)
30 PF13620 CarboxypepD_reg: Carb 88.8 1.7 3.7E-05 38.8 7.4 52 550-602 2-54 (82)
31 cd03019 DsbA_DsbA DsbA family, 88.3 29 0.00062 35.2 17.0 144 165-328 14-157 (178)
32 PF13462 Thioredoxin_4: Thiore 87.9 15 0.00032 36.6 14.3 148 166-343 12-161 (162)
33 PF13715 DUF4480: Domain of un 80.5 11 0.00025 34.1 8.8 48 550-602 2-50 (88)
34 PF00535 Glycos_transf_2: Glyc 79.2 11 0.00023 36.5 8.8 100 709-824 2-102 (169)
35 PF07210 DUF1416: Protein of u 75.9 16 0.00034 34.0 8.0 54 547-602 7-60 (85)
36 cd03023 DsbA_Com1_like DsbA fa 75.7 83 0.0018 30.7 16.7 136 166-325 5-140 (154)
37 cd00761 Glyco_tranf_GTA_type G 74.3 33 0.00071 32.1 10.5 88 719-820 9-96 (156)
38 PF05637 Glyco_transf_34: gala 72.8 4.3 9.2E-05 44.7 4.4 63 860-924 141-208 (239)
39 cd06423 CESA_like CESA_like is 72.0 35 0.00076 32.8 10.3 91 717-821 7-99 (180)
40 cd04196 GT_2_like_d Subfamily 64.1 69 0.0015 32.8 11.1 95 717-824 8-103 (214)
41 PF08400 phage_tail_N: Prophag 58.7 34 0.00074 34.6 7.2 60 547-606 2-66 (134)
42 KOG1948 Metalloproteinase-rela 56.9 73 0.0016 40.9 10.9 98 504-606 78-176 (1165)
43 PF04765 DUF616: Protein of un 56.2 21 0.00045 40.9 5.8 122 702-836 61-189 (305)
44 PF03452 Anp1: Anp1; InterPro 56.1 1.2E+02 0.0025 34.4 11.5 133 703-838 23-177 (269)
45 PRK11204 N-glycosyltransferase 55.5 91 0.002 36.5 11.4 102 705-823 54-157 (420)
46 cd04186 GT_2_like_c Subfamily 53.3 1.2E+02 0.0026 29.3 10.3 88 719-823 9-97 (166)
47 cd06439 CESA_like_1 CESA_like_ 50.8 1.7E+02 0.0038 31.1 11.8 102 705-824 29-133 (251)
48 PF13462 Thioredoxin_4: Thiore 50.1 30 0.00066 34.4 5.5 43 35-78 107-149 (162)
49 cd04185 GT_2_like_b Subfamily 48.6 1.1E+02 0.0024 31.3 9.6 93 719-823 9-102 (202)
50 cd04187 DPM1_like_bac Bacteria 47.2 2.1E+02 0.0045 28.8 11.1 147 719-880 9-163 (181)
51 cd03023 DsbA_Com1_like DsbA fa 46.2 25 0.00055 34.4 4.1 45 33-78 98-142 (154)
52 cd03019 DsbA_DsbA DsbA family, 45.3 50 0.0011 33.4 6.3 46 34-80 113-158 (178)
53 cd02520 Glucosylceramide_synth 44.6 1.8E+02 0.0039 30.0 10.4 104 707-823 3-109 (196)
54 PLN03182 xyloglucan 6-xylosylt 44.4 1.7E+02 0.0036 35.0 10.8 124 798-945 195-358 (429)
55 PRK05454 glucosyltransferase M 40.1 2.1E+02 0.0045 36.6 11.7 122 704-835 123-255 (691)
56 cd06435 CESA_NdvC_like NdvC_li 39.9 3.3E+02 0.0072 28.6 11.8 103 720-834 12-117 (236)
57 cd06421 CESA_CelA_like CESA_Ce 39.5 3.5E+02 0.0075 28.1 11.8 96 707-818 3-101 (234)
58 PRK15036 hydroxyisourate hydro 37.2 65 0.0014 32.7 5.4 54 549-602 28-89 (137)
59 PRK14583 hmsR N-glycosyltransf 37.1 2.3E+02 0.0051 33.8 11.0 102 705-823 75-178 (444)
60 cd03866 M14_CPM Peptidase M14 36.0 71 0.0015 37.6 6.3 53 547-602 294-346 (376)
61 PRK10954 periplasmic protein d 35.9 1.5E+02 0.0033 31.6 8.3 137 168-326 39-179 (207)
62 cd04190 Chitin_synth_C C-termi 35.7 1.1E+02 0.0024 33.1 7.4 78 716-823 6-96 (244)
63 cd03863 M14_CPD_II The second 34.8 1E+02 0.0022 36.4 7.4 51 547-602 296-347 (375)
64 cd04195 GT2_AmsE_like GT2_AmsE 34.5 3.7E+02 0.008 27.3 10.8 89 720-823 13-103 (201)
65 PF10111 Glyco_tranf_2_2: Glyc 34.3 4.1E+02 0.0088 29.6 11.8 149 722-882 19-186 (281)
66 PF13641 Glyco_tranf_2_3: Glyc 34.3 41 0.00088 35.3 3.7 104 707-823 3-109 (228)
67 cd06420 GT2_Chondriotin_Pol_N 33.5 2.8E+02 0.0061 27.6 9.6 95 718-824 8-103 (182)
68 cd04192 GT_2_like_e Subfamily 32.9 2.3E+02 0.005 29.2 9.1 96 717-823 7-105 (229)
69 PRK10954 periplasmic protein d 32.5 50 0.0011 35.2 4.0 44 34-78 137-180 (207)
70 KOG1928 Alpha-1,4-N-acetylgluc 32.1 22 0.00048 41.6 1.3 111 707-823 129-259 (409)
71 cd02514 GT13_GLCNAC-TI GT13_GL 29.6 2.6E+02 0.0057 32.5 9.4 108 707-822 2-118 (334)
72 COG0463 WcaA Glycosyltransfera 28.8 3.2E+02 0.0068 26.1 8.7 53 707-761 5-57 (291)
73 cd06434 GT2_HAS Hyaluronan syn 28.8 4.7E+02 0.01 27.3 10.7 97 707-824 2-101 (235)
74 PRK06437 hypothetical protein; 27.7 52 0.0011 29.1 2.6 19 308-326 29-47 (67)
75 cd02525 Succinoglycan_BP_ExoA 27.2 6.4E+02 0.014 26.3 11.4 100 708-824 3-105 (249)
76 PRK14716 bacteriophage N4 adso 27.1 8.3E+02 0.018 30.1 13.5 118 704-828 65-185 (504)
77 cd06436 GlcNAc-1-P_transferase 27.1 5.7E+02 0.012 26.2 10.8 98 717-820 7-108 (191)
78 cd06427 CESA_like_2 CESA_like_ 26.9 4.4E+02 0.0095 28.1 10.2 101 707-823 3-107 (241)
79 PF00462 Glutaredoxin: Glutare 26.6 83 0.0018 26.3 3.6 23 53-76 37-60 (60)
80 cd06245 M14_CPD_III The third 26.1 2.5E+02 0.0054 33.0 8.6 50 547-602 286-335 (363)
81 PF05738 Cna_B: Cna protein B- 25.9 91 0.002 26.9 3.8 40 563-602 2-43 (70)
82 cd03022 DsbA_HCCA_Iso DsbA fam 25.6 75 0.0016 32.6 3.8 42 35-77 138-179 (192)
83 cd04191 Glucan_BSP_ModH Glucan 25.6 5.7E+02 0.012 28.3 10.9 104 722-835 15-130 (254)
84 PF03071 GNT-I: GNT-I family; 25.2 2.9E+02 0.0064 33.3 8.9 114 703-822 91-212 (434)
85 PLN02726 dolichyl-phosphate be 23.7 7.3E+02 0.016 26.5 11.2 104 706-824 10-117 (243)
86 TIGR03472 HpnI hopanoid biosyn 23.2 6.8E+02 0.015 29.1 11.5 105 704-820 40-145 (373)
87 TIGR03469 HonB hopene-associat 23.0 6.9E+02 0.015 29.2 11.5 112 704-823 39-156 (384)
88 cd02510 pp-GalNAc-T pp-GalNAc- 22.9 4.9E+02 0.011 28.9 9.9 94 717-823 8-106 (299)
89 cd03858 M14_CP_N-E_like Carbox 22.7 3.1E+02 0.0067 32.2 8.5 49 549-602 299-347 (374)
90 cd04188 DPG_synthase DPG_synth 22.6 5E+02 0.011 26.9 9.4 95 717-824 7-106 (211)
91 TIGR03111 glyc2_xrt_Gpos1 puta 21.6 8.1E+02 0.018 29.2 11.9 102 704-822 48-153 (439)
92 PRK10824 glutaredoxin-4; Provi 20.3 1.2E+02 0.0026 29.9 3.7 26 55-81 61-86 (115)
No 1
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-200 Score=1766.63 Aligned_cols=902 Identities=47% Similarity=0.781 Sum_probs=803.4
Q ss_pred CCCcchhHHHHHHhhhHhhhccCCCCCChhhHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceecccch-----
Q 001779 6 SADDDALEIHHVEGAFVETILPKAKTPPQDMLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSESSE----- 80 (1014)
Q Consensus 6 ~~~~~~~~~~~v~~aF~~~~~~~~~~~~~~~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~~de----- 80 (1014)
..+.+++...||.+.|.+ -+|.++. .++++.++.||..++++..|++|||+ +..|+|++||.|++.++
T Consensus 545 ~~~~~~~~~e~v~~~~~~-~~~~~~~-----~~il~~~s~~d~~~~~~~~fv~~lGl-~~~p~vL~NG~i~~~~~~~~~~ 617 (1470)
T KOG1879|consen 545 VRSDEYVLVEHVKGVFEN-TLPNAKK-----DDILGIDSTYDEGRKAGFSFVQELGL-DSLPSVLLNGEIFDHESNAWDL 617 (1470)
T ss_pred hcccchhHHHhhhHHHHh-hccccch-----hhhhccccchhhcchHHHHHHHHhCC-CccCeeeECCeeccccccccch
Confidence 344555668899999955 6666654 46779999999999999999999999 66999999999999665
Q ss_pred -HHHHHHHHHHHHHHHHHHhccccCCcchHHHHHHhc-ccccccCceeccCCCCCCeEeecccccccchhhhccCceecC
Q 001779 81 -EALLNAMNDELQRIQEQVYYGNINSYTDVLEKVLSE-SGINRYNPQIITDAKVKPKFISLASSFLGRETELKDINYLHS 158 (1014)
Q Consensus 81 -~~l~~~i~~~lq~IQ~aVY~G~i~dd~dV~d~fL~q-na~pRrN~~Ilp~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~ 158 (1014)
++|+++||+++++||+|||+|+|+|++++++|+|.+ +++||+|++|++..+..-.|..+.....+.+.+++++.|+++
T Consensus 618 e~~i~~~i~~~t~~iQ~av~~G~l~d~~~~~d~ll~~~~v~~R~N~~i~~~~~~~~~v~s~l~~~~k~~~~~~~~~Yl~~ 697 (1470)
T KOG1879|consen 618 EESILQEIMKDTPFIQRAVYEGKLEDDQNVVDFLLEQKSVLPRINKRILSGSKFLDSVVSILSSTDKSAVLLKNVNYLTK 697 (1470)
T ss_pred HHHHHHHHHhhhHHHHHHHHcCCCccchHHHHHHHhCccccccccccccccccchhhHHhhhcchhhhhHHHhhcccccc
Confidence 599999999999999999999999999999999999 999999999999433334444444444578899999999987
Q ss_pred CCCCCCCcceEEEEEEeCCChhHHHHHHHHHHHHhcCCCceEEEEeecCCCCCCCcchHHHHHHHHHhhcccchhhHHHH
Q 001779 159 PETVDDVKPVTHLLAVDVTSKKGMKLLHEGIRFLIGGSNGARLGVLFSASREADLPSIIFVKAFEITASTYSHKKKVLEF 238 (1014)
Q Consensus 159 ~~~~~~~~~~t~wvv~D~~~~~g~~ll~~al~~~~~~s~~~Rv~~ihNp~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~ 238 (1014)
+ +++...++|+||||||++++||++|++||+++ +++.++|||+|.||++...+.+..+++.|+||+.++..
T Consensus 698 ~-~~~~~~~vT~wlvaDf~~~~grklL~~al~~~-~~s~~~Ri~~I~np~s~~~~~~~s~~~~i~aal~~~~~------- 768 (1470)
T KOG1879|consen 698 K-TEESNLPVTIWLVADFESPSGRKLLTNALDYL-KSSKNARIGLIPNPSSESAEGSNSIKRPILAALLFLPA------- 768 (1470)
T ss_pred C-chhhccceEEEEEcccCChhHHHHHHHHHHHH-hccccceEEEecCchhhhhcccccccchHHHHHhcCcH-------
Confidence 6 67788899999999999999999999999998 67899999999999997777778899999999887762
Q ss_pred HHHHhhhhhhhhhhccccccchhHHHHHHHHHHHHhcCCChHHHhhhcCccchhhHHHHHHHHHHHHHHHhCCCCCCceE
Q 001779 239 LDQLCSFYERTYLLASSATADSTQAFIDKVCEFAEANGLSSKVYRASLPEYSKGKVRKQLNKVVQFLHRQLGVESGANAV 318 (1014)
Q Consensus 239 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 318 (1014)
++.++.....+... .. . ..++ ...+++|++++... ....++.+|++.+|+.+|+++|
T Consensus 769 --~l~~e~~~~~~~~~----~~-~-----------~~~i-~s~~e~~~~~~~~~----l~~~~~~~~~~vl~l~~~q~~V 825 (1470)
T KOG1879|consen 769 --KLAKEEVASHLYKG----KN-S-----------DLSI-GSKFEKDLEKLLLF----LKKLHSFIVKEVLGLNSGQRAV 825 (1470)
T ss_pred --hhhHHHHHHHhhcC----cc-c-----------ccch-hHHHHHhhhhhhhh----HHhhhhHHHHhhhccCCCccee
Confidence 33332222211110 00 0 0011 13455666554432 2346678899999999999999
Q ss_pred EEccEEe-cCCCCCCCCHhhHHHHHHHHHHhhhHHHHHHHHHhcccCCCCCCCcccccchhhhhhhhhhhcccccccCCc
Q 001779 319 ITNGRVT-FPIDESTFLSHDLSLLESVEFKHRIKHIWEIIEEVNWQETYPDIDPDMLTSKFVSDIILFVTSSMAMRDRSS 397 (1014)
Q Consensus 319 ~~NGR~i-~~~~~~~~~~~d~~~l~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 397 (1014)
+.|||+| |+..++.|..+||.+|++++..+..++|.+++++... .+.....++..|++.+.+....++.
T Consensus 826 v~Ngr~igpl~~~E~f~t~Df~lLe~~~~~~~~~ki~~~~~~~~~----------~v~~~~~sd~~~~v~~~~~t~~~s~ 895 (1470)
T KOG1879|consen 826 VSNGRFIGPLSSSESFNTADFKLLESMLFSNYSQKISNIIEESEL----------DVSEDVFSDFLMKVAALMSTQDKSR 895 (1470)
T ss_pred eecCeEEEeccchhhhchhhHHHHHHHhccccchhHHHHHHHhhh----------cchhhhhhhhhhhhhcccccCCccc
Confidence 9999999 6665799999999999999999999999988887431 1224556788899988777777777
Q ss_pred ccccccccccccceEEeCC--CCceEEEEEEecCCCcchhhHHHHHHHHhccCCCeEEEEEccCCCCCccCcceeeeecc
Q 001779 398 ESARFEILSAEYSAVVFNS--ENSTIHIDAVIDPLSPTGQKLSSLLRVLQRYAQPSMRIVLNPMSSLVDIPLKNYYRYVV 475 (1014)
Q Consensus 398 ~~~~~~~~~~~~s~~~~~~--~~~~~~i~~ivDPlse~aQk~~~ll~~l~~~~~v~i~i~lnp~~~l~~~PlkrfYr~v~ 475 (1014)
.|.++..++.+|+++..++ ..+.|+|+||+||||++||||++||.+|+++.|++|||+|||+.+++|||||||||||+
T Consensus 896 ~r~~~~~~~~~~s~v~~~~~~~~a~idv~aVlDPlsreaQkl~sll~~l~kl~n~~i~i~lnP~~~lse~PlkrfYRyV~ 975 (1470)
T KOG1879|consen 896 PRMDFSFLKDEHSVVKFPPDENNATIDVLAVLDPLSREAQKLASLLEVLRKLTNVNIRIILNPKSKLSEMPLKRFYRYVL 975 (1470)
T ss_pred cccchhhhcCCCceeecCCCCCCceEEEEEEecCCCHHHHHHHHHHHHHHHhcCcceEEEEcCchhhhhccHHHHHHhhc
Confidence 7888888999999999866 45679999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCcccCCceeeccCCCCCceeEeecCCCCeEEeeecccccCCcccccccCCCcceEEEEEeeeEEEEEEec
Q 001779 476 PTMDDFSNTDYSISGPKAFFANMPLSKTLTMNLDVPEPWLVEPVIAVHDLDNILLEKLGDTRTLQAVFELEALVLTGHCS 555 (1014)
Q Consensus 476 ~~~~~f~~~g~~~~~~~a~f~~lp~~~~~t~~~d~P~~w~v~~~~~~~DlDNi~l~~~~~~~~~~a~yeLe~ilieGh~~ 555 (1014)
++++.|+++|....+ .|.|.+||.++|+||+|++|++|+|+++.+.||||||+|++.+ ++|+|+|||||||+||||+
T Consensus 976 ~~e~~f~~~g~~~~~-~a~F~nlP~~~lltm~l~~pesWlVe~v~a~~DLdNI~Le~~~--~~v~A~yele~lLleG~c~ 1052 (1470)
T KOG1879|consen 976 EAELSFSANGSDSDG-VAKFDNLPASPLLTMNLDVPESWLVEAVRAIYDLDNIKLEDTS--SDVTAEYELEYLLLEGHCF 1052 (1470)
T ss_pred CcccccccCCccccc-eeeecCCCcCceeEEeecCCCceEeeeccccccchheeeeccC--Cchheeeehhhhhccceeh
Confidence 999999999988777 8999999999999999999999999999999999999999985 5899999999999999999
Q ss_pred cCCC-CCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEecCCCCCcceEEeecCCCCcCCCCccEEEEecC
Q 001779 556 EKDH-EPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQLAPGRSSELYVLKEDGNVNEDRSLSKRITINDL 634 (1014)
Q Consensus 556 d~~~-~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l~~grs~~~y~i~~~~~~~~~~~~~~~v~v~sf 634 (1014)
|..+ +|||||||+|||.++|+++||||||||||||||||||+|.|+||+|||+++|.|.++.+.... .+...|+|+||
T Consensus 1053 d~~~g~pprGlql~Lgt~~~p~i~DTiVManlGYfQlKanPG~W~L~lr~G~S~d~y~i~s~dg~~~~-~~~~qvvidSf 1131 (1470)
T KOG1879|consen 1053 DKVSGQPPRGLQLTLGTSANPHIVDTIVMANLGYFQLKANPGAWILRLRDGRSSDIYQIVSHDGTPDQ-SSDIQVVIDSF 1131 (1470)
T ss_pred hhccCCCCCceEEEeccCCCCeeeeeEEEeccceeEEecCCcceEEEecCCCchhheeeecccCCCCc-CCCceEEEecC
Confidence 9988 999999999999999999999999999999999999999999999999999999987665443 67889999999
Q ss_pred CCceEEEEEEecCCccccccccCCCccccccccCCccccccccccccccCCcccchhhhhcccCcccccCCeeEEEEeec
Q 001779 635 RGKVVHMEVVKKKGKENEKLLVSSDEDSHSQAEGHWNSNFLKWASGFIGGSEQSKKEKAAVDHGKVERHGKTINIFSIAS 714 (1014)
Q Consensus 635 ~~~~i~~~v~k~~g~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~InIf~vas 714 (1014)
+|++|.|+|+|+||||++++|.+.. +.|.|+|+. +|.|+..+.. +++.++||||+||+
T Consensus 1132 ~gk~v~vkV~k~~g~e~edll~~~~------~~g~wns~k-----~f~~~~~~~~-----------~~~~~vINIFSvAS 1189 (1470)
T KOG1879|consen 1132 RGKVVKVKVSKKPGMEEEDLLSDEK------EEGFWNSIK-----SFTGGLAKSM-----------KKDKEVINIFSVAS 1189 (1470)
T ss_pred CceEEEEEEeecCCcchhhhhcchh------hhhhhhhhh-----hhcccccccc-----------cCccceEEEEeecc
Confidence 9999999999999999999998721 357899933 3334332211 12345899999999
Q ss_pred CcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhh
Q 001779 715 GHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFL 794 (1014)
Q Consensus 715 g~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfL 794 (1014)
||+|||++.+||.||++||+++|+||+|.++|||.||+.||+|+++|||+|++++|+||+|||+|+++||++|+|++|||
T Consensus 1190 GHLYERflrIMm~SvlknTktpVKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~YkWPrWLhqQ~EKQRiiWgyKILFL 1269 (1470)
T KOG1879|consen 1190 GHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQYKWPRWLHQQTEKQRIIWGYKILFL 1269 (1470)
T ss_pred ccHHHHHHHHHHHHHHhCCCCceeEEeehhhcChHHHHHHHHHHHHhCceEEEEEecCchhhhhhhhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccCCCCeeeeeeEEEehH
Q 001779 795 DVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLRGRPYHISALYVVDLK 874 (1014)
Q Consensus 795 p~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfNSGV~LiNL~ 874 (1014)
|+|||.+++||||+|||+|||+||.||+++|++|+|||++|+|++|++|+||||||+|||++||.+++||+|++|||||+
T Consensus 1270 DVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkYHISALYVVDLk 1349 (1470)
T KOG1879|consen 1270 DVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKYHISALYVVDLK 1349 (1470)
T ss_pred hhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCccccceeeeeeHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccCcccccccCCCeEEEccCCCCCCchhh
Q 001779 875 RFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCESWCGNATKSKAKTIDLCNNPMTKEPKL 954 (1014)
Q Consensus 875 ~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~wc~~e~~~~akiIh~~~np~tk~pkl 954 (1014)
|||+.++||++|.+||.||.|||||+|+||||+|+|+|.+||++||++|.||+|||+++++++|||||+||||+||||||
T Consensus 1350 rFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCETWC~d~skkkAktIDLCnNP~TKEpKL 1429 (1470)
T KOG1879|consen 1350 RFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCETWCDDESKKKAKTIDLCNNPLTKEPKL 1429 (1470)
T ss_pred HHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhhhhcCchhhhhchhhhhhcCccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccccCChhhhHHHHHHHHHhcCcc
Q 001779 955 QGARRIVSEWPDLDSEARQFTAKILGEE 982 (1014)
Q Consensus 955 ~~a~r~~~eW~~yd~e~~~~~~~~~~~~ 982 (1014)
++|+|+++||.+||.|+++++.++..++
T Consensus 1430 ~~A~Riv~EW~dyD~Ei~~v~s~~~~~~ 1457 (1470)
T KOG1879|consen 1430 DAARRIVSEWTDYDAEIRSVLSKAQDED 1457 (1470)
T ss_pred HHHhhhcCCCcccchHHHHHHHHhhccC
Confidence 9999999999999999999999997766
No 2
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=3.7e-54 Score=466.00 Aligned_cols=248 Identities=78% Similarity=1.420 Sum_probs=232.2
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHH
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRII 786 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~ 786 (1014)
||||++++|+.|..++++||+||++|++.+++|||+++++|+++++.|+++.++|+++++++.++||.|++.+...++..
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~~~~~~~~~~~~~~~ 80 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTKSPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPRWLHKQTEKQRII 80 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCCCCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecChhhhhcccccchhH
Confidence 79999999999999999999999999987899999999999999999999999999999999999999988766555556
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccCCCCeeee
Q 001779 787 WAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLRGRPYHIS 866 (1014)
Q Consensus 787 ~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfNS 866 (1014)
++|+||+++.+||.+++||||||+|+||++||++||++||+|+++|||+||....++.+.++|+++||++.++++.||||
T Consensus 81 ~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNS 160 (248)
T cd06432 81 WGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHIS 160 (248)
T ss_pred HHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccce
Confidence 89999999999999999999999999999999999999999999999999987555667788999999888877789999
Q ss_pred eeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccCcccccccCCCeEEEccCC
Q 001779 867 ALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCESWCGNATKSKAKTIDLCNN 946 (1014)
Q Consensus 867 GV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~wc~~e~~~~akiIh~~~n 946 (1014)
|||||||++||+.+++++++.+++.++.++.++.++|||+||.++++.+++.||++||||+.||.++.+++|+|||||+|
T Consensus 161 GVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~~~~~~~~~~~~~~~~~~ 240 (248)
T cd06432 161 ALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETWCSDESKKKAKTIDLCNN 240 (248)
T ss_pred eeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHHhcccccCccceeecccC
Confidence 99999999999999999999999988888888999999999999987679999999999999999999999999999999
Q ss_pred CCCCchhh
Q 001779 947 PMTKEPKL 954 (1014)
Q Consensus 947 p~tk~pkl 954 (1014)
|.++||++
T Consensus 241 ~~~~~~~~ 248 (248)
T cd06432 241 PLTKEPKL 248 (248)
T ss_pred CCCCCCCC
Confidence 99999874
No 3
>PF06427 UDP-g_GGTase: UDP-glucose:Glycoprotein Glucosyltransferase; InterPro: IPR009448 The N-terminal region of this group of proteins is required for correct folding of the ER UDP-Glc: glucosyltransferase. These proteins selectively reglucosylates unfolded glycoproteins, thus providing quality control for protein transport out of the ER. Unfolded, denatured glycoproteins are substantially better substrates for glucosylation by this enzyme than are the corresponding native proteins. This protein and transient glucosylation may be involved in monitoring and/or assisting the folding and assembly of newly made glycoproteins, in order to identify glycoproteins that need assistance in folding from chaperones; GO: 0003980 UDP-glucose:glycoprotein glucosyltransferase activity, 0006486 protein glycosylation
Probab=100.00 E-value=8.1e-54 Score=450.43 Aligned_cols=205 Identities=46% Similarity=0.742 Sum_probs=185.1
Q ss_pred hhhhhhhhcccccccCCcc--cccccccccccceEEeC---CCCceEEEEEEecCCCcchhhHHHHHHHHhccCCCeEEE
Q 001779 380 SDIILFVTSSMAMRDRSSE--SARFEILSAEYSAVVFN---SENSTIHIDAVIDPLSPTGQKLSSLLRVLQRYAQPSMRI 454 (1014)
Q Consensus 380 s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~---~~~~~~~i~~ivDPlse~aQk~~~ll~~l~~~~~v~i~i 454 (1014)
||..|..++........+. +.+++.++..++++.++ ++.+.++|+|||||+||.||||++||++|+++.||+|+|
T Consensus 1 sD~~~~~~s~l~~~~~~~~~r~~~~~~~~~~~s~~~~~~~~~~~~~i~v~~vvDPlse~aQkl~sll~~l~~~~~v~i~i 80 (211)
T PF06427_consen 1 SDWFMLVSSLLSSSFHRDSSRVDRFDFLSDNHSSFEVGPKDNDESPIDVVAVVDPLSEEAQKLASLLSVLSELPFVNIRI 80 (211)
T ss_pred CcEEEEeeeeeeccccCccceeeehhccCCCceEEEecCCCCCCccEEEEEEECCCCHHHHHHHHHHHHHHhccCceEEE
Confidence 3555666666655444332 33557888888888876 245689999999999999999999999999999999999
Q ss_pred EEccCCCCCccCcceeeeeccCCCcCCCCCCCcccCCceeeccCCCCCceeEeecCCCCeEEeeecccccCCcccccccC
Q 001779 455 VLNPMSSLVDIPLKNYYRYVVPTMDDFSNTDYSISGPKAFFANMPLSKTLTMNLDVPEPWLVEPVIAVHDLDNILLEKLG 534 (1014)
Q Consensus 455 ~lnp~~~l~~~PlkrfYr~v~~~~~~f~~~g~~~~~~~a~f~~lp~~~~~t~~~d~P~~w~v~~~~~~~DlDNi~l~~~~ 534 (1014)
+|||+.+++|+|||||||||+++++.|+++|.++. |.|.|.+||.+++||++||+|++|+|+|++|.||||||+|++++
T Consensus 81 ~LnP~~~~~elPlkrFYR~v~~~~~~F~~~G~~~~-p~a~F~~lP~~~llTl~~d~P~sW~V~~~~a~~DLDNI~l~~~~ 159 (211)
T PF06427_consen 81 LLNPTSKLSELPLKRFYRYVLPSEPQFDADGRLIP-PSAVFSNLPSSPLLTLGMDVPESWLVEPKEAVYDLDNIKLSDLS 159 (211)
T ss_pred EECCccccCcceeeeEEeecCCcccccCCCCCccC-ceeEEecCcCCceEEecCCCCCceEEEEeecCcCCCceecccCC
Confidence 99999999999999999999999999999999886 99999999999999999999999999999999999999999997
Q ss_pred CCcceEEEEEeeeEEEEEEeccCCC-CCCCceEEEEecCCCCcccceEEecc
Q 001779 535 DTRTLQAVFELEALVLTGHCSEKDH-EPPQGLQLILGTKSTPHLVDTLVMAN 585 (1014)
Q Consensus 535 ~~~~~~a~yeLe~ilieGh~~d~~~-~~p~Glql~L~~~~~~~~~dTivM~n 585 (1014)
++..++|+||||||||||||+|..+ .|||||||+|++.++++..|||||||
T Consensus 160 ~~~~v~a~y~Le~iLieG~~~d~~~~~pp~Glql~L~~~~~~~~~DTiVMaN 211 (211)
T PF06427_consen 160 SGTTVEAVYELESILIEGHARDITTGSPPRGLQLQLGTENGPHSVDTIVMAN 211 (211)
T ss_pred CCceEEEEEEEeeEEEEeEEeecCCCCCCCCcEEEEecCCCCcccCceEeCC
Confidence 6446999999999999999999987 99999999999999999999999998
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=4.3e-40 Score=355.44 Aligned_cols=235 Identities=30% Similarity=0.397 Sum_probs=193.6
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccc-cccH
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKE-KQRI 785 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~-~~r~ 785 (1014)
|||+++|+|++|.++++++|+||++|++.+++|||+++++|+++++.|..+.+.+++.++|+.++++.+...+.. +...
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTKPLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIK 80 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCCCeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhcCccc
Confidence 799999999999999999999999999889999999999999999999999888899999999987765443332 2233
Q ss_pred HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccCCCCeee
Q 001779 786 IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLRGRPYHI 865 (1014)
Q Consensus 786 ~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfN 865 (1014)
.++|+||++|.+|| +++||||||+|+||++||++||++|++++++|||+||.......+++ +|.....+.+|||
T Consensus 81 ~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~-----~~~~~~~~~~yfN 154 (246)
T cd00505 81 IVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYR-----QKRSHLAGPDYFN 154 (246)
T ss_pred cceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhh-----cccCCCCCCCcee
Confidence 58999999999999 89999999999999999999999999999999999986432212221 1222224568999
Q ss_pred eeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccC--ceeeeCCccccccCcccc------cccCC
Q 001779 866 SALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTV--PIFSLPQEWLWCESWCGN------ATKSK 937 (1014)
Q Consensus 866 SGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~--~I~~Lp~~wN~~~~wc~~------e~~~~ 937 (1014)
|||||+||++||+....+++...+.+ ...++.++|||+||.+|.+. +|..||++||++.++|.. +...+
T Consensus 155 sGVmlinl~~~r~~~~~~~~~~~~~~---~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~ 231 (246)
T cd00505 155 SGVFVVNLSKERRNQLLKVALEKWLQ---SLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKN 231 (246)
T ss_pred eeeEEEechHHHHHHHHHHHHHHHHh---hcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccccchhhhcCC
Confidence 99999999999988777766655442 33568889999999999973 399999999999887643 25678
Q ss_pred CeEEEccCCCCCCch
Q 001779 938 AKTIDLCNNPMTKEP 952 (1014)
Q Consensus 938 akiIh~~~np~tk~p 952 (1014)
++|||||++ +|+|
T Consensus 232 ~~iiHy~g~--~KPW 244 (246)
T cd00505 232 AKVIHFNGP--TKPW 244 (246)
T ss_pred CEEEEeCCC--CCCC
Confidence 999999985 5666
No 5
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=4.9e-38 Score=353.83 Aligned_cols=234 Identities=17% Similarity=0.198 Sum_probs=186.0
Q ss_pred CeeEEEEeecCcchHHHHHHHHHHHHHcCC-CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccc
Q 001779 705 KTINIFSIASGHLYERFLKIMILSVLKNTC-RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQ 783 (1014)
Q Consensus 705 ~~InIf~vasg~~Ye~~l~vmI~SIl~nt~-~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~ 783 (1014)
.+|||+++ +|.+|.++++++|+||+.|++ .+++|||+++++|+++++.|..+++.++.++.++.++ ..++.......
T Consensus 24 ~~i~Iv~~-~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id-~~~~~~~~~~~ 101 (334)
T PRK15171 24 NSLDIAYG-IDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLIN-CERLKSLPSTK 101 (334)
T ss_pred CceeEEEE-CcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeC-HHHHhCCcccC
Confidence 57999885 688999999999999999876 4699999999999999999999999999999998886 34444332333
Q ss_pred cH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEe-eccCCCCCCCCcccccchhhhhcc--C
Q 001779 784 RI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYT-PFCDNNKDMDGYRFWRQGFWKDHL--R 859 (1014)
Q Consensus 784 r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV-~d~~s~~~~~g~~fw~~gyw~~~L--~ 859 (1014)
++ ..+|+||++|++||.+++||||||||+||++||++||++|+++..+||| +++... +|... +..+ +
T Consensus 102 ~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~-------~~~~~--~~~l~~~ 172 (334)
T PRK15171 102 NWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE-------WWSKR--AQSLQTP 172 (334)
T ss_pred cCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh-------HHHHH--HHhcCCc
Confidence 44 4899999999999988999999999999999999999999996666666 443211 12111 1122 1
Q ss_pred --CCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccCcc-------
Q 001779 860 --GRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCESWC------- 930 (1014)
Q Consensus 860 --~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~wc------- 930 (1014)
+..|||||||||||++||+.++++++++++..- .....+.++|||+||.+|.+ ++..||++||++.+..
T Consensus 173 ~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~-~~~~~~~~~DQDiLN~~~~~-~~~~L~~~wN~~~~~~~~~~~~~ 250 (334)
T PRK15171 173 GLASGYFNSGFLLINIPAWAQENISAKAIEMLADP-EIVSRITHLDQDVLNILLAG-KVKFIDAKYNTQFSLNYELKDSV 250 (334)
T ss_pred cccccceecceEEEcHHHHHHhhHHHHHHHHHhcc-ccccceeecChhHHHHHHcC-CeEECCHhhCCccchhHHHHhcc
Confidence 246999999999999999999999999988631 11246788999999999996 9999999999986432
Q ss_pred cccccCCCeEEEccCCCCCCchh
Q 001779 931 GNATKSKAKTIDLCNNPMTKEPK 953 (1014)
Q Consensus 931 ~~e~~~~akiIh~~~np~tk~pk 953 (1014)
.......++|||||+ .+|+|+
T Consensus 251 ~~~~~~~p~IIHy~G--~~KPW~ 271 (334)
T PRK15171 251 INPVNDETVFIHYIG--PTKPWH 271 (334)
T ss_pred cccccCCCEEEEECC--CCCCCC
Confidence 222345789999998 356664
No 6
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=5.3e-36 Score=329.63 Aligned_cols=257 Identities=19% Similarity=0.217 Sum_probs=188.2
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecC-CcccccccccccH
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKW-PTWLHKQKEKQRI 785 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~w-p~~L~~q~~~~r~ 785 (1014)
||++.|+++.+|.+.++++|+||+.|++.+++|||+++++|.+.++.|.+..+.+++++.|++++. ...+... ...++
T Consensus 1 ~~~~iv~~~~~y~~~~~~~i~Sil~n~~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~-~~~~~ 79 (280)
T cd06431 1 IHVAIVCAGYNASRDVVTLVKSVLFYRRNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWI-PNKHY 79 (280)
T ss_pred CEEEEEEccCCcHHHHHHHHHHHHHcCCCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccC-cccch
Confidence 577777788999999999999999999888999999999999999999888888899999998841 1111111 11233
Q ss_pred H--HHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhc--CCCC-CcEEEeeccCCCCCCCCcccccchh-hhhcc-
Q 001779 786 I--WAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDM--DIKG-RPLAYTPFCDNNKDMDGYRFWRQGF-WKDHL- 858 (1014)
Q Consensus 786 ~--~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dl--DL~g-~~iAaV~d~~s~~~~~g~~fw~~gy-w~~~L- 858 (1014)
. ++|+|||+|++||.+++||||||||+||++||++||++ |+.+ +++|++++... |..+. |+...
T Consensus 80 s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~---------~~~~~~~~~~~~ 150 (280)
T cd06431 80 SGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSD---------WYLGNLWKNHRP 150 (280)
T ss_pred hhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchh---------hhhhhhhhccCC
Confidence 3 47799999999998899999999999999999999998 6765 56777765311 11111 11111
Q ss_pred --CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCc--eeeeCCccccccCc-----
Q 001779 859 --RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVP--IFSLPQEWLWCESW----- 929 (1014)
Q Consensus 859 --~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~--I~~Lp~~wN~~~~w----- 929 (1014)
....|||||||||||++||+.++.+++.....+.......+.++|||+||.++.+.+ ++.||++||+|.++
T Consensus 151 ~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~~~~~ 230 (280)
T cd06431 151 WPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDHTRSE 230 (280)
T ss_pred CcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCccchHh
Confidence 113599999999999999999999998866543211234567899999999999744 88999999998642
Q ss_pred -ccccccCCCeEEEccCCCCCCchhhH-hhhccccCChhhhHHHHHHHH
Q 001779 930 -CGNATKSKAKTIDLCNNPMTKEPKLQ-GARRIVSEWPDLDSEARQFTA 976 (1014)
Q Consensus 930 -c~~e~~~~akiIh~~~np~tk~pkl~-~a~r~~~eW~~yd~e~~~~~~ 976 (1014)
|.. ....++|||||+ .+|+|... .+..++..|..|.+.-...++
T Consensus 231 ~~~~-~~~~p~IIHf~g--~~KPW~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (280)
T cd06431 231 QCYR-DVSDLKVIHWNS--PKKLRVKNKHVEFFRNLYLTFLEYDGNLLR 276 (280)
T ss_pred Hhhc-CcCCCEEEEeCC--CCCCCCcCCCChHHHHHHHHHHhcCchhhh
Confidence 111 246799999997 24544322 234555666666554444433
No 7
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=1.3e-35 Score=320.15 Aligned_cols=229 Identities=22% Similarity=0.320 Sum_probs=191.5
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCC-CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccH
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTC-RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRI 785 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~-~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~ 785 (1014)
|||+++ +|.+|.+++++++.|+++|++ .+++||+++++++++.++.|..+...++..|++++++++.+...+....++
T Consensus 1 ~~I~~~-~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 79 (248)
T cd04194 1 MNIVFA-IDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFFPATTDHI 79 (248)
T ss_pred CCEEEE-ecHhhHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCcccccc
Confidence 689876 588999999999999999998 689999999999999999999999888999999999865443332122333
Q ss_pred -HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhh---hccCCC
Q 001779 786 -IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWK---DHLRGR 861 (1014)
Q Consensus 786 -~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~---~~L~~~ 861 (1014)
..+|+||++|.+|| +++||||||+|+||++||.+||++|++|+++||++||.... ...++ ......
T Consensus 80 ~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~---------~~~~~~~~~~~~~~ 149 (248)
T cd04194 80 SYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQ---------EKKRKRRLGGYDDG 149 (248)
T ss_pred cHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHH---------HHHHHhhcCCCccc
Confidence 58999999999999 89999999999999999999999999999999999985321 01111 112356
Q ss_pred CeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccCccccc--------
Q 001779 862 PYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCESWCGNA-------- 933 (1014)
Q Consensus 862 ~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~wc~~e-------- 933 (1014)
+||||||||+|+++||+.++.+++++++++ ....+.++|||+||.+|.+ .+..||++||++.+++...
T Consensus 150 ~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~---~~~~~~~~DQd~LN~~~~~-~~~~L~~~~N~~~~~~~~~~~~~~~~~ 225 (248)
T cd04194 150 SYFNSGVLLINLKKWREENITEKLLELIKE---YGGRLIYPDQDILNAVLKD-KILYLPPRYNFQTGFYYLLKKKSKEEQ 225 (248)
T ss_pred ceeeecchheeHHHHHHhhhHHHHHHHHHh---CCCceeeCChHHHHHHHhC-CeEEcCcccccchhHhHHhhccchhHH
Confidence 899999999999999999999999999885 4456888999999999996 7999999999998776432
Q ss_pred ----ccCCCeEEEccCCCCCCch
Q 001779 934 ----TKSKAKTIDLCNNPMTKEP 952 (1014)
Q Consensus 934 ----~~~~akiIh~~~np~tk~p 952 (1014)
...+++|||||+. .|+|
T Consensus 226 ~~~~~~~~~~iiHf~g~--~KPW 246 (248)
T cd04194 226 ELEEARKNPVIIHYTGS--DKPW 246 (248)
T ss_pred HHHHHhcCCEEEEeCCC--CCCC
Confidence 3578999999985 3455
No 8
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=8e-35 Score=320.34 Aligned_cols=260 Identities=18% Similarity=0.279 Sum_probs=192.4
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCC-CChhHHHHHHHHHHHcCcEE--EEEEecCCcccccccccc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNY-LSPQFKDVIPHMAQEYGFEY--ELITYKWPTWLHKQKEKQ 783 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~-LS~~~k~~L~~l~~~~~~~i--~fv~~~wp~~L~~q~~~~ 783 (1014)
|||+.|++|++ .+.+.+||+|++.|+..+++|||++++ +++++++.+.++...++..+ .++.+.+|..-. ..-+.
T Consensus 1 ~~~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~-~~ws~ 78 (304)
T cd06430 1 MHLAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNA-AEWKK 78 (304)
T ss_pred CEEEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccch-hhhhh
Confidence 68888999987 688999999999998889999999987 99999999999977664433 666666664100 00011
Q ss_pred cH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhc--CCCCC-cEEEeeccCCCCCCCCcccccchhhhhccC
Q 001779 784 RI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDM--DIKGR-PLAYTPFCDNNKDMDGYRFWRQGFWKDHLR 859 (1014)
Q Consensus 784 r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dl--DL~g~-~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~ 859 (1014)
.. ..+|+|||+|.+|| ++|||||||||+||.+||+|||++ |+++. .+|++|+..... ..|...+.+....
T Consensus 79 l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~-----~~~~~~~~~~~~~ 152 (304)
T cd06430 79 LFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPN-----IGWYNRFARHPYY 152 (304)
T ss_pred cccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccc-----hhhhhhhcccCcc
Confidence 11 37899999999999 899999999999999999999999 99885 666667642210 0122111111112
Q ss_pred CCCeeeeeeEEEehHHHHh-----------hcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCc--eeeeCCccccc
Q 001779 860 GRPYHISALYVVDLKRFRE-----------TAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVP--IFSLPQEWLWC 926 (1014)
Q Consensus 860 ~~~YfNSGV~LiNL~~wR~-----------~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~--I~~Lp~~wN~~ 926 (1014)
+..|||||||+|||++||+ .++.+++++++++ +...+.++|||+||+++++.| ++.||++||++
T Consensus 153 ~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~~ 229 (304)
T cd06430 153 GKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKK---YKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYR 229 (304)
T ss_pred cccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHh---cccCCCCCCHHHHHHHHcCCCCeEEEcCccccCC
Confidence 3467999999999999999 7889999999885 456788999999999999854 88999999976
Q ss_pred cCcc------cccccCCCeEEEccCCCCCCchhhHhhhccccCChhhh---HHHHHHHHHh
Q 001779 927 ESWC------GNATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDLD---SEARQFTAKI 978 (1014)
Q Consensus 927 ~~wc------~~e~~~~akiIh~~~np~tk~pkl~~a~r~~~eW~~yd---~e~~~~~~~~ 978 (1014)
.+.| .......+++||+ |.|..+..+...+|.++....+|| ..-+.++..+
T Consensus 230 ~d~~~y~~~~~~~~~~~~~~~H~-n~~~~~~~~~~~f~~~~~~~~~~~~g~~~~~~~~~~l 289 (304)
T cd06430 230 PDHCMYGSNCKAAEEEGVFILHG-NRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPL 289 (304)
T ss_pred ccceeecccccccccccceEEEc-CCCCCCCccchHHHHHHHHHHhcccccchHHHhHHHH
Confidence 6544 3333468899997 555555555556666666666676 3344555555
No 9
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=2e-34 Score=313.36 Aligned_cols=227 Identities=15% Similarity=0.167 Sum_probs=178.8
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccc-----
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQ----- 779 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q----- 779 (1014)
+||+++ +| +|. .+++++.|++.|++ .+++|||+++++|.+.++.+......++.+|+++.++ +..+...
T Consensus 1 ~hiv~~-~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~-~~~~~~~~~~~~ 76 (257)
T cd06429 1 IHVVIF-SD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFD-DFKLLGKVKVDS 76 (257)
T ss_pred CCEEEE-ec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeC-cHHhhcccccch
Confidence 588775 67 887 57788888888775 4799999999999888777777776678899999985 2222111
Q ss_pred ---------------cccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCC
Q 001779 780 ---------------KEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDM 843 (1014)
Q Consensus 780 ---------------~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~ 843 (1014)
....++ ..+|+||++|++|| +++||||||||+||++||+|||++||+|+++|||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d------- 148 (257)
T cd06429 77 LMQLESEADTSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET------- 148 (257)
T ss_pred hhhhhccccccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-------
Confidence 122344 48999999999999 699999999999999999999999999999999965
Q ss_pred CCcccccchhhhhccCCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCC-CCCCCCCCChhhhccccCceeeeCCc
Q 001779 844 DGYRFWRQGFWKDHLRGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDP-NSLANLDQDLPNYAQHTVPIFSLPQE 922 (1014)
Q Consensus 844 ~g~~fw~~gyw~~~L~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~-~sL~~~DQDlLN~v~~~~~I~~Lp~~ 922 (1014)
||||||||+||++||+.++++++..+++...... ......|||++|.+|.+ ++..||++
T Consensus 149 -------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~-~~~~L~~~ 208 (257)
T cd06429 149 -------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYG-LTSPLDPS 208 (257)
T ss_pred -------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccC-eeEECChH
Confidence 7999999999999999999999999887532111 12446799999999996 99999999
Q ss_pred cccccC-ccc---ccccCCCeEEEccCCCCCCchhhHhhhccccCChhh
Q 001779 923 WLWCES-WCG---NATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDL 967 (1014)
Q Consensus 923 wN~~~~-wc~---~e~~~~akiIh~~~np~tk~pkl~~a~r~~~eW~~y 967 (1014)
||++.. +.. .+...+++||||++ .+|+|.-....++.+.|+.|
T Consensus 209 wN~~~l~~~~~~~~~~~~~~~IIHy~G--~~KPW~~~~~~~~~~~w~~y 255 (257)
T cd06429 209 WHVRGLGYNYGIRPQDIKAAAVLHFNG--NMKPWLRTAIPSYKELWEKY 255 (257)
T ss_pred HcccCCcccccccccccCCcEEEEECC--CCCCcCCCCCChHHHHHHHH
Confidence 998732 111 23356899999998 35777655545677778876
No 10
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=5.2e-34 Score=317.17 Aligned_cols=239 Identities=19% Similarity=0.177 Sum_probs=195.7
Q ss_pred eeEEEEeecCcchHHHHHHHHHHHHHcCCC-CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccc-ccc
Q 001779 706 TINIFSIASGHLYERFLKIMILSVLKNTCR-PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQK-EKQ 783 (1014)
Q Consensus 706 ~InIf~vasg~~Ye~~l~vmI~SIl~nt~~-~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~-~~~ 783 (1014)
+|||+. |.|++|..+++++|+|++.|++. .++||++.+++++++++.|.++++.|+..+.++.++- +.+.... .+.
T Consensus 2 ~~~Iv~-a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~-~~~~~~~~~~~ 79 (325)
T COG1442 2 TIPIAF-AFDKNYLIPAGVSIYSLLEHNRKIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDI-EPFLDYPPFTK 79 (325)
T ss_pred cccEEE-EcccccchhHHHHHHHHHHhCccccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEec-hhhhccccccc
Confidence 589987 57999999999999999999986 8999999999999999999999999998887777653 2233322 445
Q ss_pred cHH-HHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhcc--CC
Q 001779 784 RII-WAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHL--RG 860 (1014)
Q Consensus 784 r~~-~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L--~~ 860 (1014)
|++ ++|+|+|++++||+ .+|+||+|+|+||.||+++||++|++++++|||.|+.+.. |..+.-+... ..
T Consensus 80 ~~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~-------~~~~~~~~~~~~~~ 151 (325)
T COG1442 80 RFSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHY-------MKEGALRLEKGDLE 151 (325)
T ss_pred chHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhh-------hhhhhhHhhhcccc
Confidence 665 89999999999996 4999999999999999999999999999999999986532 2211111111 24
Q ss_pred CCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccCccc-------cc
Q 001779 861 RPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCESWCG-------NA 933 (1014)
Q Consensus 861 ~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~wc~-------~e 933 (1014)
..||||||+++|++.||+.++.+++...+.. .++.+.++|||+||.+|++ ++..||.+||.+.+.-. ..
T Consensus 152 ~~yFNaG~llinl~~W~~~~i~~k~i~~~~~---~~~~~~~~DQdiLN~i~~~-~~~~L~~~YN~~~~~~~~~~~~~~~~ 227 (325)
T COG1442 152 GSYFNAGVLLINLKLWREENIFEKLIELLKD---KENDLLYPDQDILNMIFED-RVLELPIRYNAIPYIDSQLKDKYIYP 227 (325)
T ss_pred cccCccceeeehHHHHHHhhhHHHHHHHHhc---cccccCCccccHHHHHHHh-hhhccCcccceeehhhhccchhhhcc
Confidence 6899999999999999999999999999864 3468999999999999996 99999999999864221 34
Q ss_pred ccCCCeEEEccCCCCCCchhhHhhhcc
Q 001779 934 TKSKAKTIDLCNNPMTKEPKLQGARRI 960 (1014)
Q Consensus 934 ~~~~akiIh~~~np~tk~pkl~~a~r~ 960 (1014)
....+.++|||+ .+|+|+...+.+.
T Consensus 228 ~~~~~~iiHy~g--~~KPW~~~~~~~~ 252 (325)
T COG1442 228 FGDDPVILHYAG--PTKPWHSDSSNYP 252 (325)
T ss_pred CCCCceEEEecC--CCCCCcCcccccc
Confidence 456788999998 4567776665553
No 11
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=8e-33 Score=321.66 Aligned_cols=262 Identities=15% Similarity=0.194 Sum_probs=197.9
Q ss_pred cCCeeEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccc---
Q 001779 703 HGKTINIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLH--- 777 (1014)
Q Consensus 703 ~~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~--- 777 (1014)
+...+||+++ +| +| .+++|+|.|++.|++ .+++|||++++++.+.++.+..+...++..|+++.++=-.|+.
T Consensus 310 d~~~~Hia~~-sD-Nv-laasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~ 386 (603)
T PLN02718 310 DPDLYHYVVF-SD-NV-LACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADY 386 (603)
T ss_pred CCcceeEEEE-cC-Cc-eeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccc
Confidence 4556999875 45 46 589999999999954 4699999999999999998888887778999999885112221
Q ss_pred -----ccc--ccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCC----CCCC
Q 001779 778 -----KQK--EKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNK----DMDG 845 (1014)
Q Consensus 778 -----~q~--~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~----~~~g 845 (1014)
... ...++ ..+|+||+||++|| +++||||||+|+||++||++||++||+|+++|||+||.... .+..
T Consensus 387 ~~~lk~l~s~~~~~~S~~~y~Rl~ipellp-~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~ 465 (603)
T PLN02718 387 NSLLMKQNSHDPRYISALNHARFYLPDIFP-GLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDT 465 (603)
T ss_pred hhhhhhccccccccccHHHHHHHHHHHHhc-ccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhh
Confidence 111 11233 48999999999999 69999999999999999999999999999999999996421 0000
Q ss_pred cccccchhhh-hcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhh---hccccCceeeeC
Q 001779 846 YRFWRQGFWK-DHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPN---YAQHTVPIFSLP 920 (1014)
Q Consensus 846 ~~fw~~gyw~-~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN---~v~~~~~I~~Lp 920 (1014)
+..+. ..|- +.+ +..||||+||+||||++||+.++++++..+++. +... .+.|||.|| .+|.+ +++.||
T Consensus 466 ~lnfs-~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~---n~~~-~l~dqdaLpp~LlvF~g-ri~~LD 539 (603)
T PLN02718 466 FINFS-DPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQL---GVKR-PLWKAGSLPIGWLTFYN-QTVALD 539 (603)
T ss_pred hhhcc-chhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHh---ccCc-cccCcccccHHHHHhcC-ceeecC
Confidence 00000 0011 122 367999999999999999999999999999875 2222 446999998 78885 999999
Q ss_pred CccccccCcc----cccccCCCeEEEccCCCCCCchhhHhh-hccccCChhhhHHHHHHHHH
Q 001779 921 QEWLWCESWC----GNATKSKAKTIDLCNNPMTKEPKLQGA-RRIVSEWPDLDSEARQFTAK 977 (1014)
Q Consensus 921 ~~wN~~~~wc----~~e~~~~akiIh~~~np~tk~pkl~~a-~r~~~eW~~yd~e~~~~~~~ 977 (1014)
++||.+...+ ..+....|+||||+++ .| ||++.+ .++.+.|..|-+.-..+++.
T Consensus 540 ~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~--~K-PWle~~i~~yr~~W~k~v~~~~~~l~~ 598 (603)
T PLN02718 540 KRWHVLGLGHESGVGASDIEQAAVIHYDGV--MK-PWLDIGIGKYKRYWNIHVPYHHPYLQQ 598 (603)
T ss_pred hHHhccCccccccccccccCCCEEEEECCC--CC-ccccCChhhHHHHHHhhcCCCChHHHh
Confidence 9999886432 3345678999999984 34 555554 57889999987766666653
No 12
>PLN02523 galacturonosyltransferase
Probab=99.97 E-value=5e-31 Score=303.41 Aligned_cols=261 Identities=16% Similarity=0.221 Sum_probs=187.5
Q ss_pred CCeeEEEEeecCcchHHHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCC-cccc---
Q 001779 704 GKTINIFSIASGHLYERFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWP-TWLH--- 777 (1014)
Q Consensus 704 ~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp-~~L~--- 777 (1014)
..-.|.+. .+|. ...++|+|.|++.|++. +++|||+++.++-..+..+-.+....+..|++..++ . .|+.
T Consensus 246 p~l~Hy~i-fSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Ie-df~~ln~~~ 321 (559)
T PLN02523 246 PSLYHYAI-FSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVE-DYKFLNSSY 321 (559)
T ss_pred CCcceEEE-ecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEee-hhhhccccc
Confidence 33467654 4664 78899999999999875 599999999999888777766665557788777764 1 2222
Q ss_pred -c---ccc---------------------------cccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcC
Q 001779 778 -K---QKE---------------------------KQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMD 825 (1014)
Q Consensus 778 -~---q~~---------------------------~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlD 825 (1014)
+ +.+ ...+ ..+|+||+||++|| +++||||||+|+||++||++||++|
T Consensus 322 ~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP-~ldKVLYLD~DVVVq~DLseLw~iD 400 (559)
T PLN02523 322 VPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYP-KLHRILFLDDDVVVQKDLTGLWKID 400 (559)
T ss_pred chHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEecCCHHHHHhCc
Confidence 0 000 0223 37899999999999 6999999999999999999999999
Q ss_pred CCCCcEEEeeccCCC-CCCCCcccccchhhhhcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCC
Q 001779 826 IKGRPLAYTPFCDNN-KDMDGYRFWRQGFWKDHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLD 903 (1014)
Q Consensus 826 L~g~~iAaV~d~~s~-~~~~g~~fw~~gyw~~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~D 903 (1014)
|+|+++|||+||... .+...+..+....-++++ ++.||||+||+||||++||++++++++. +++.+.. .....|
T Consensus 401 L~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~-~w~~ln~---~~~l~D 476 (559)
T PLN02523 401 MDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYH-YWQNLNE---NRTLWK 476 (559)
T ss_pred CCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHH-HHHHhcc---cccccc
Confidence 999999999999421 000000000000011223 3568888899999999999999999984 5665422 245679
Q ss_pred CChhh---hccccCceeeeCCccccccCc----ccccccCCCeEEEccCCCCCCchhhHhh-hccccCChhhhHHHHHHH
Q 001779 904 QDLPN---YAQHTVPIFSLPQEWLWCESW----CGNATKSKAKTIDLCNNPMTKEPKLQGA-RRIVSEWPDLDSEARQFT 975 (1014)
Q Consensus 904 QDlLN---~v~~~~~I~~Lp~~wN~~~~w----c~~e~~~~akiIh~~~np~tk~pkl~~a-~r~~~eW~~yd~e~~~~~ 975 (1014)
||.|| .+|.+ +++.||++||++... ++.+..++|+||||+++. |+ |++.+ .++.+.|+.|-+.-..++
T Consensus 477 qdaLpp~LivF~g-ri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~--KP-Wle~~i~~yr~~W~kYl~~~~~fl 552 (559)
T PLN02523 477 LGTLPPGLITFYS-TTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNM--KP-WLDIAMNQFKPLWTKYVDYDMEFV 552 (559)
T ss_pred ccccchHHHHhcC-ceEecCchhhccCCccCCCccccccCCCEEEEECCCC--Cc-cccCCCCcchHHHHHHHccCCHHH
Confidence 99996 67775 999999999987532 234456789999999853 44 44554 466788998866655555
Q ss_pred HH
Q 001779 976 AK 977 (1014)
Q Consensus 976 ~~ 977 (1014)
+.
T Consensus 553 ~~ 554 (559)
T PLN02523 553 QA 554 (559)
T ss_pred Hh
Confidence 43
No 13
>PLN02829 Probable galacturonosyltransferase
Probab=99.96 E-value=4.3e-29 Score=289.79 Aligned_cols=260 Identities=15% Similarity=0.221 Sum_probs=180.2
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe---cCCc-----cc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY---KWPT-----WL 776 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~---~wp~-----~L 776 (1014)
.+=+++.+|+ .--+.|++.|-+.|.++ ++.|||++|.++=.-....-.+..--+..|+...+ +|-. -+
T Consensus 331 l~Hy~ifSdN--VLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~~~pvl 408 (639)
T PLN02829 331 LYHYALFSDN--VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVL 408 (639)
T ss_pred cceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhcccccccccHHH
Confidence 3333445664 34467889999999874 58999999876533322222222222456655554 3311 01
Q ss_pred ccc-----------------------cccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEE
Q 001779 777 HKQ-----------------------KEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLA 832 (1014)
Q Consensus 777 ~~q-----------------------~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iA 832 (1014)
+.. +...++ ..+|+|||||++|| +++||||||+|+||++||++||++||+|+++|
T Consensus 409 ~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviA 487 (639)
T PLN02829 409 KQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNG 487 (639)
T ss_pred HHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEE
Confidence 100 001123 37899999999999 79999999999999999999999999999999
Q ss_pred EeeccCCC-CCCCCcccccchhhhhcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhc
Q 001779 833 YTPFCDNN-KDMDGYRFWRQGFWKDHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYA 910 (1014)
Q Consensus 833 aV~d~~s~-~~~~g~~fw~~gyw~~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v 910 (1014)
||+||... .++..+.+|........+ +..||||+|||||||++||+.++++++..+++. +..... .||+.||.+
T Consensus 488 AVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~---n~~r~L-~dlgaLPp~ 563 (639)
T PLN02829 488 AVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKL---NHDRQL-WKLGTLPPG 563 (639)
T ss_pred EeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHH---ccCCcc-ccccCCChH
Confidence 99999642 111111122211112223 357999999999999999999999999988753 223332 699999986
Q ss_pred c---ccCceeeeCCccccccCcccc----cccCCCeEEEccCCCCCCchhhHhh-hccccCChhhhHHHHHHHHH
Q 001779 911 Q---HTVPIFSLPQEWLWCESWCGN----ATKSKAKTIDLCNNPMTKEPKLQGA-RRIVSEWPDLDSEARQFTAK 977 (1014)
Q Consensus 911 ~---~~~~I~~Lp~~wN~~~~wc~~----e~~~~akiIh~~~np~tk~pkl~~a-~r~~~eW~~yd~e~~~~~~~ 977 (1014)
+ .+ .++.||++||.+...++. +..+.|+||||+++. +||++.+ .++++.|..|.+.-..+++.
T Consensus 564 Ll~F~g-~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~---KPWle~~i~~yr~lW~kYl~~~~~fl~~ 634 (639)
T PLN02829 564 LITFWK-RTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNM---KPWLEIGIPKYRNYWSKYVDYDQVYLRE 634 (639)
T ss_pred HHHhcC-ceEecChhheecCCCCCcccchhcccCCeEEEECCCC---CccccCCcccchHHHHHHHhcCchHHHh
Confidence 4 64 899999999999754432 357889999999853 4566654 57889999998887777764
No 14
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.96 E-value=4e-29 Score=265.73 Aligned_cols=231 Identities=23% Similarity=0.279 Sum_probs=164.7
Q ss_pred EEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccc----ccccc
Q 001779 708 NIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWL----HKQKE 781 (1014)
Q Consensus 708 nIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L----~~q~~ 781 (1014)
||+.+ +|.+|..++.++++|+++|++ ..++||+++++++++.++.|......+.....+.... ...+ .....
T Consensus 1 ~i~~~-~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 78 (250)
T PF01501_consen 1 HIVLA-CDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPD-ISMLEEFQFNSPS 78 (250)
T ss_dssp -EEEE-CSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETS-GGHHH--TTS-HC
T ss_pred CEEEE-eCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccch-HHhhhhhhhcccc
Confidence 67765 688999999999999999998 5799999999999999999988766553322122211 1111 11122
Q ss_pred cccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhh---hc
Q 001779 782 KQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWK---DH 857 (1014)
Q Consensus 782 ~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~---~~ 857 (1014)
..++ ..+|.||+++.+|| +++||||||+|+||.+||.+||+++++|+++|+++++... .++...++. ..
T Consensus 79 ~~~~~~~~~~rl~i~~ll~-~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~------~~~~~~~~~~~~~~ 151 (250)
T PF01501_consen 79 KRHFSPATFARLFIPDLLP-DYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFD------NFPNKRFPFSERKQ 151 (250)
T ss_dssp CTCGGGGGGGGGGHHHHST-TSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----H------HHHTSTTSSEEECE
T ss_pred cccccHHHHHHhhhHHHHh-hcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhh------hhhhcccchhhccc
Confidence 2333 47899999999996 7999999999999999999999999999999999883110 011111111 11
Q ss_pred cCCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccCcc------c
Q 001779 858 LRGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCESWC------G 931 (1014)
Q Consensus 858 L~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~wc------~ 931 (1014)
....+||||||||+|+++||+.++.++++.+++. +...+.+.||+++|.+|.+ ++..||++||++..|+ .
T Consensus 152 ~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~DQ~~ln~~~~~-~~~~L~~~~N~~~~~~~~~~~~~ 227 (250)
T PF01501_consen 152 PGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQ---NGMKLGFPDQDILNIVFYG-NIKPLPCRYNCQPSWYNQSDDYF 227 (250)
T ss_dssp STTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHH---TTTT-SSCHHHHHHHHHTT-GEEEEEGGGSEEHHHHHHTHHHH
T ss_pred CcccccccCcEEEEeechhhhhhhhhhhhhhhhh---cccccCcCchHHHhhhccc-eeEEECchhccccccccccchhh
Confidence 2357999999999999999999999999999774 4446778999999999995 9999999999998877 2
Q ss_pred ccccCCCeEEEccCCCCCCchh
Q 001779 932 NATKSKAKTIDLCNNPMTKEPK 953 (1014)
Q Consensus 932 ~e~~~~akiIh~~~np~tk~pk 953 (1014)
.....++++|||++ ..|+|+
T Consensus 228 ~~~~~~~~iiHy~g--~~KPW~ 247 (250)
T PF01501_consen 228 NPILEDAKIIHYSG--PPKPWK 247 (250)
T ss_dssp HHHGCC-SEEE--S--SS-TTS
T ss_pred HhhcCCeEEEEeCC--CCcCCC
Confidence 33467899999998 345553
No 15
>PLN02742 Probable galacturonosyltransferase
Probab=99.96 E-value=1.6e-28 Score=282.75 Aligned_cols=261 Identities=16% Similarity=0.230 Sum_probs=184.3
Q ss_pred eeEEEEeecCcchHHHHHHHHHHHHHcCCCC--eEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccc----
Q 001779 706 TINIFSIASGHLYERFLKIMILSVLKNTCRP--VKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQ---- 779 (1014)
Q Consensus 706 ~InIf~vasg~~Ye~~l~vmI~SIl~nt~~~--v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q---- 779 (1014)
..+=+++.||+ .-.+.++|.|...|+++| +.|||++|..+-.-...+-....--+..|++++++==.|+...
T Consensus 226 ~l~Hy~ifSdN--vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pv 303 (534)
T PLN02742 226 NLYHFCVFSDN--ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPV 303 (534)
T ss_pred CcceEEEEecc--chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchH
Confidence 34444555664 456799999999999876 9999999966544333332222222568888887411333220
Q ss_pred ---------------------------cccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcE
Q 001779 780 ---------------------------KEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPL 831 (1014)
Q Consensus 780 ---------------------------~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~i 831 (1014)
+...++ ..+|+||+||.+|| +++||||||+|+||++||++||++||+|+++
T Consensus 304 l~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp-~l~KvlYLD~DvVV~~DL~eL~~~DL~~~vi 382 (534)
T PLN02742 304 LKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYP-ALEKVVFLDDDVVVQKDLTPLFSIDLHGNVN 382 (534)
T ss_pred HHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhh-ccCeEEEEeCCEEecCChHHHhcCCCCCCEE
Confidence 001122 48999999999999 6999999999999999999999999999999
Q ss_pred EEeeccCCC-CCCCCcccccchhhhhcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhh
Q 001779 832 AYTPFCDNN-KDMDGYRFWRQGFWKDHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNY 909 (1014)
Q Consensus 832 AaV~d~~s~-~~~~g~~fw~~gyw~~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~ 909 (1014)
|||+||... .+..++-+|.....+..+ ++.||||+||+||||++||+.++++.+. .+++. + ......||+.||.
T Consensus 383 aAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~-~w~e~--n-~~~~l~d~gaLpp 458 (534)
T PLN02742 383 GAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYH-YWQEQ--N-VDRTLWKLGTLPP 458 (534)
T ss_pred EEeCchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHH-HHHHh--c-cccccccccccch
Confidence 999999421 111111112211112222 4679999999999999999999999665 44443 2 2334569999996
Q ss_pred c---cccCceeeeCCccccccCcc----cccccCCCeEEEccCCCCCCchhhHhh-hccccCChhhhHHHHHHHHH
Q 001779 910 A---QHTVPIFSLPQEWLWCESWC----GNATKSKAKTIDLCNNPMTKEPKLQGA-RRIVSEWPDLDSEARQFTAK 977 (1014)
Q Consensus 910 v---~~~~~I~~Lp~~wN~~~~wc----~~e~~~~akiIh~~~np~tk~pkl~~a-~r~~~eW~~yd~e~~~~~~~ 977 (1014)
+ |.+ .++.||.+||++.-.+ +.+..+.++||||+++. +||++.+ .++.+.|..|.+.-..+++.
T Consensus 459 ~LLaF~g-~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~---KPWl~~~i~~yr~~W~kYl~~s~~fl~~ 530 (534)
T PLN02742 459 GLLTFYG-LTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNM---KPWLKLAIERYKPLWERYVNYSHPYLQQ 530 (534)
T ss_pred HHHHHcC-cceecChhheecccccccccchhhccCCeEEEECCCC---CcccccCCcccchHHHHHHccCCHHHHh
Confidence 4 775 8999999999986322 33467899999999853 4555555 57899999998877777664
No 16
>PLN02870 Probable galacturonosyltransferase
Probab=99.96 E-value=5.9e-29 Score=285.72 Aligned_cols=263 Identities=15% Similarity=0.225 Sum_probs=176.7
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe---cC-Cc----cc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY---KW-PT----WL 776 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~---~w-p~----~L 776 (1014)
.+=+++.+|+ .--+.|++.|-+.|.++ ++.|||++|.++=.-....-.+..--+..|+...+ +| +. -+
T Consensus 206 ~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl 283 (533)
T PLN02870 206 YHHFVLSTDN--ILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVL 283 (533)
T ss_pred ceeEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHH
Confidence 3334455664 23467889999988874 58999999866533222221111111345554444 22 00 00
Q ss_pred cc---------------c-------------------cccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHH
Q 001779 777 HK---------------Q-------------------KEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGEL 821 (1014)
Q Consensus 777 ~~---------------q-------------------~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL 821 (1014)
+. + +...++ +.+|+||+||++|| +++||||||+|+||++||++|
T Consensus 284 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP-~LdKVLYLD~DVVVqgDLseL 362 (533)
T PLN02870 284 EAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFP-NLDKVVFLDDDVVIQRDLSPL 362 (533)
T ss_pred HHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHH
Confidence 00 0 001122 37899999999999 799999999999999999999
Q ss_pred HhcCCCCCcEEEeeccCCCC------CCCCcccccchhhhhcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhcc
Q 001779 822 YDMDIKGRPLAYTPFCDNNK------DMDGYRFWRQGFWKDHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSK 894 (1014)
Q Consensus 822 ~dlDL~g~~iAaV~d~~s~~------~~~g~~fw~~gyw~~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~ 894 (1014)
|++||+|+++|||+||.... ...++-.+.....+..+ ++.|||||||+||||++||+.++++++..++++-
T Consensus 363 w~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n-- 440 (533)
T PLN02870 363 WDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKEN-- 440 (533)
T ss_pred hhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhh--
Confidence 99999999999999995310 00000000011111222 3679999999999999999999999999998751
Q ss_pred CCCCCCCCCCChh---hhccccCceeeeCCccccccCccc----ccccCCCeEEEccCCCCCCchhhHhhhccccCChhh
Q 001779 895 DPNSLANLDQDLP---NYAQHTVPIFSLPQEWLWCESWCG----NATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDL 967 (1014)
Q Consensus 895 d~~sL~~~DQDlL---N~v~~~~~I~~Lp~~wN~~~~wc~----~e~~~~akiIh~~~np~tk~pkl~~a~r~~~eW~~y 967 (1014)
....+.+.|||+| |.+|.+ .++.||++||++..-+. .+..++++||||+++ .|+|.-....++++.|..|
T Consensus 441 ~~~~l~l~DQdaLp~~livf~g-~v~~LD~rWN~~gLgy~~~~~~~~i~~aaIIHY~G~--~KPW~~~~~~~yr~~W~kY 517 (533)
T PLN02870 441 LKSNLTMWKLGTLPPALIAFKG-HVHPIDPSWHMLGLGYQSKTNIESVKKAAVIHYNGQ--SKPWLEIGFEHLRPFWTKY 517 (533)
T ss_pred hhcCceecccccccHhHHHhcC-ceEECChHHhcCCCCCcccccccccCCcEEEEECCC--CCCccccCccchhHHHHHH
Confidence 1234667899999 577775 99999999998753221 234678999999984 4555434445577889999
Q ss_pred hHHHHHHHHH
Q 001779 968 DSEARQFTAK 977 (1014)
Q Consensus 968 d~e~~~~~~~ 977 (1014)
.+.-..+++.
T Consensus 518 l~~s~~fl~~ 527 (533)
T PLN02870 518 VNYSNDFIRN 527 (533)
T ss_pred HccCchHhhh
Confidence 8777777664
No 17
>PLN02659 Probable galacturonosyltransferase
Probab=99.96 E-value=9e-29 Score=284.27 Aligned_cols=260 Identities=16% Similarity=0.199 Sum_probs=174.7
Q ss_pred EEeecCcchHHHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe---cC-Cc----cccc-
Q 001779 710 FSIASGHLYERFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY---KW-PT----WLHK- 778 (1014)
Q Consensus 710 f~vasg~~Ye~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~---~w-p~----~L~~- 778 (1014)
+++.+|+ .--+.|++.|-+.|+++ ++.|||++|.++=.-....-.+..--+..|+...+ +| +. -++.
T Consensus 210 y~ifSdN--vLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql 287 (534)
T PLN02659 210 FVLASDN--ILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAM 287 (534)
T ss_pred EEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHH
Confidence 3445654 23467888888888874 58899999866533222221121111345544443 22 00 0000
Q ss_pred ------------------------c---------cccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhc
Q 001779 779 ------------------------Q---------KEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDM 824 (1014)
Q Consensus 779 ------------------------q---------~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dl 824 (1014)
. +...++ +.+|+||+||++|| +++||||||+|+||++||++||++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP-~LdKVLYLD~DVVVqgDLseLw~i 366 (534)
T PLN02659 288 EKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFP-SLNKVVFLDDDIVVQTDLSPLWDI 366 (534)
T ss_pred hhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhh-hcCeEEEeeCCEEEcCchHHHHhC
Confidence 0 001112 48999999999999 799999999999999999999999
Q ss_pred CCCCCcEEEeeccCCCCCC-CCccc---cc--chhhhhccC-CCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCC
Q 001779 825 DIKGRPLAYTPFCDNNKDM-DGYRF---WR--QGFWKDHLR-GRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPN 897 (1014)
Q Consensus 825 DL~g~~iAaV~d~~s~~~~-~g~~f---w~--~gyw~~~L~-~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~ 897 (1014)
||+|+++|||+||...... ...++ .. .....+.+. +.|||||||+||||++||+.++++++..++++. ...
T Consensus 367 DL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n--~~~ 444 (534)
T PLN02659 367 DMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEEN--LKS 444 (534)
T ss_pred CCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhc--ccc
Confidence 9999999999999531000 00001 00 011122232 578999999999999999999999999998751 113
Q ss_pred CCCCCCCChh---hhccccCceeeeCCccccccCccc----ccccCCCeEEEccCCCCCCchhhHhhhccccCChhhhHH
Q 001779 898 SLANLDQDLP---NYAQHTVPIFSLPQEWLWCESWCG----NATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDLDSE 970 (1014)
Q Consensus 898 sL~~~DQDlL---N~v~~~~~I~~Lp~~wN~~~~wc~----~e~~~~akiIh~~~np~tk~pkl~~a~r~~~eW~~yd~e 970 (1014)
.+.+.|||+| |.+|.+ .++.||++||+....+. .+..+.++||||+++ .|+|+--.-.++++.|..|-+.
T Consensus 445 ~l~l~DQdaLp~~LivF~g-~v~~LD~rWN~~gLg~~~~~~~~~i~~paIIHYnG~--~KPW~~~~~~~yr~~W~kYl~~ 521 (534)
T PLN02659 445 DLSLWQLGTLPPGLIAFHG-HVHVIDPFWHMLGLGYQENTSLADAESAGVVHFNGR--AKPWLDIAFPQLRPLWAKYIDS 521 (534)
T ss_pred cccccccccchHHHHHhcC-CEEECChhheecCCcccccccccccCCcEEEEECCC--CCccccccCCcchhHHHHHhcc
Confidence 4667899999 477885 99999999998653221 124578999999995 4555544446678889999777
Q ss_pred HHHHHHH
Q 001779 971 ARQFTAK 977 (1014)
Q Consensus 971 ~~~~~~~ 977 (1014)
-..+++.
T Consensus 522 s~~fl~~ 528 (534)
T PLN02659 522 SDKFIKS 528 (534)
T ss_pred CCHHHHh
Confidence 7776664
No 18
>PLN02769 Probable galacturonosyltransferase
Probab=99.96 E-value=9.6e-29 Score=288.86 Aligned_cols=262 Identities=17% Similarity=0.211 Sum_probs=178.9
Q ss_pred CeeEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe---cCCc----c
Q 001779 705 KTINIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY---KWPT----W 775 (1014)
Q Consensus 705 ~~InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~---~wp~----~ 775 (1014)
+..+=+++.+|+ .-.+.++|.|.+.|++ .++.|||+++..+-.-....-.+..--+..|+..++ +|.. .
T Consensus 328 ~~l~Hy~ifSdN--vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~~~~~ 405 (629)
T PLN02769 328 PSLRHYVIFSKN--VLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDLDKFA 405 (629)
T ss_pred CccceEEEEecc--ceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeecccchHH
Confidence 334444556764 3567899999999998 579999999866533322221221112445554444 3421 0
Q ss_pred ccc--------------------ccccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEe
Q 001779 776 LHK--------------------QKEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYT 834 (1014)
Q Consensus 776 L~~--------------------q~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV 834 (1014)
++. +....++ ..+|.|||||++|| +++||||||+|+||++||++||++||+|+++|||
T Consensus 406 ~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAV 484 (629)
T PLN02769 406 LKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFK-KLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAV 484 (629)
T ss_pred HHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEe
Confidence 000 0011222 38999999999999 6999999999999999999999999999999999
Q ss_pred eccCCCCCCCCcccccchhhhhccCCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhcc-CCCCCCCCCCChhhhcccc
Q 001779 835 PFCDNNKDMDGYRFWRQGFWKDHLRGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSK-DPNSLANLDQDLPNYAQHT 913 (1014)
Q Consensus 835 ~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~-d~~sL~~~DQDlLN~v~~~ 913 (1014)
+||..+-...+ .|....+ .-+..||||||||||||++||+.++++++..+++.+.. +...+...+|+++|.+|.+
T Consensus 485 edc~~rl~~~~-~yl~~~~---F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g 560 (629)
T PLN02769 485 QFCGVRLGQLK-NYLGDTN---FDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQD 560 (629)
T ss_pred hhhhhhhhhhh-hhhcccC---CCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcC
Confidence 99953210000 0111111 12457999999999999999999999999988876533 2334445677777889996
Q ss_pred CceeeeCCccccccCc----ccccccCCCeEEEccCCCCCCchhhHhhhccccCChhhhHHHHHHHH
Q 001779 914 VPIFSLPQEWLWCESW----CGNATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDLDSEARQFTA 976 (1014)
Q Consensus 914 ~~I~~Lp~~wN~~~~w----c~~e~~~~akiIh~~~np~tk~pkl~~a~r~~~eW~~yd~e~~~~~~ 976 (1014)
.++.||++||++.-. ...+...+++||||+++ .|+|.-....++++.|+.|-+.-..+++
T Consensus 561 -~v~~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~--~KPW~e~~i~~yr~~W~kYl~~~~~fl~ 624 (629)
T PLN02769 561 -LIYPLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGN--MKPWLELGIPKYKKYWKRFLNRDDRFMD 624 (629)
T ss_pred -eEEECCHHHccccccccccccccccCCcEEEEECCC--CCCccCCCCChHHHHHHHHhccCChHHh
Confidence 999999999986421 23345679999999984 3555433335678889988665555554
No 19
>PLN02867 Probable galacturonosyltransferase
Probab=99.95 E-value=2.9e-28 Score=281.21 Aligned_cols=258 Identities=15% Similarity=0.201 Sum_probs=172.7
Q ss_pred EEeecCcchHHHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe---cCCcc--cc-----
Q 001779 710 FSIASGHLYERFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY---KWPTW--LH----- 777 (1014)
Q Consensus 710 f~vasg~~Ye~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~---~wp~~--L~----- 777 (1014)
+++.+|+ .--+.|++.|-+.|.++ ++.|||++|.++=.-....-.+..--+..|+...+ +|-.. ..
T Consensus 214 y~ifSdN--vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~ 291 (535)
T PLN02867 214 VVLLTDN--VLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEML 291 (535)
T ss_pred EEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhccccccccccHHHHH
Confidence 3445664 23467888999988874 58899999866533222222221112345554443 34210 00
Q ss_pred ------------cc-----------------cccccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCC
Q 001779 778 ------------KQ-----------------KEKQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIK 827 (1014)
Q Consensus 778 ------------~q-----------------~~~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~ 827 (1014)
.. +....+ +.+|+||+||++|| +++||||||+|+||++||++||++||+
T Consensus 292 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP-~LdKVLYLD~DVVVqgDLseLwdiDL~ 370 (535)
T PLN02867 292 EIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFP-DLNKIVFLDDDVVVQHDLSSLWELDLN 370 (535)
T ss_pred HHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhh-ccCeEEEecCCEEEcCchHHHHhCcCC
Confidence 00 000112 37999999999999 799999999999999999999999999
Q ss_pred CCcEEEeecc--CCCCCCCCccccc-----chhhhhcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCC
Q 001779 828 GRPLAYTPFC--DNNKDMDGYRFWR-----QGFWKDHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSL 899 (1014)
Q Consensus 828 g~~iAaV~d~--~s~~~~~g~~fw~-----~gyw~~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL 899 (1014)
|+++|||.|+ ... ...+.++-+ ..+-+..+ ++.|||||||+||||++||++++++++..+++.- ....+
T Consensus 371 gkviaAV~D~~c~~~-~~~~~~~~~YlNfsnp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n--~~~~~ 447 (535)
T PLN02867 371 GKVVGAVVDSWCGDN-CCPGRKYKDYLNFSHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLS--LNSGL 447 (535)
T ss_pred CCeEEEEeccccccc-cccchhhhhhccccchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhc--hhccc
Confidence 9999999863 211 111111100 00001112 3579999999999999999999999999988751 11224
Q ss_pred CCCCCChhhh---ccccCceeeeCCccccccCc-----ccccccCCCeEEEccCCCCCCchhhHhhhccccCChhhhHHH
Q 001779 900 ANLDQDLPNY---AQHTVPIFSLPQEWLWCESW-----CGNATKSKAKTIDLCNNPMTKEPKLQGARRIVSEWPDLDSEA 971 (1014)
Q Consensus 900 ~~~DQDlLN~---v~~~~~I~~Lp~~wN~~~~w-----c~~e~~~~akiIh~~~np~tk~pkl~~a~r~~~eW~~yd~e~ 971 (1014)
...|||.||. +|.+ .++.||++||++.-. ...+....++||||+++ .|+|+-....++++.|..|-+.-
T Consensus 448 ~l~dqd~LN~~LlvF~g-~v~~LD~rWNv~gLgy~~~~~~~~~i~~paIIHYnG~--~KPW~e~~~~~yR~~W~kyl~~~ 524 (535)
T PLN02867 448 QLWQPGALPPALLAFKG-HVHPIDPSWHVAGLGSRPPEVPREILESAAVLHFSGP--AKPWLEIGFPEVRSLWYRHVNFS 524 (535)
T ss_pred ccccccccchHHHHhcC-cEEECChhhcccCCCcccccchhhhcCCcEEEEECCC--CCcccccCCCchhHHHHHhcCcc
Confidence 5579999996 7775 999999999986421 22234578999999984 46666556677889998886655
Q ss_pred HHHHH
Q 001779 972 RQFTA 976 (1014)
Q Consensus 972 ~~~~~ 976 (1014)
..+++
T Consensus 525 ~~fl~ 529 (535)
T PLN02867 525 DKFIR 529 (535)
T ss_pred chHHH
Confidence 55554
No 20
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.95 E-value=2.4e-27 Score=274.72 Aligned_cols=260 Identities=15% Similarity=0.222 Sum_probs=178.1
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe---cCCc-----cc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY---KWPT-----WL 776 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~---~wp~-----~L 776 (1014)
.+=+++.+|+ .--+.|++.|-+.|.++ ++.|||++|.++=.-....-.+..--+..|+...+ +|-. -+
T Consensus 345 l~Hy~ifSDN--VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl 422 (657)
T PLN02910 345 LYHYAIFSDN--VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVL 422 (657)
T ss_pred ceeEEEEecc--eeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHH
Confidence 3334455664 34568889999999874 58999999876533322222221212445555544 3311 01
Q ss_pred cc---------------c--------ccc----ccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCC
Q 001779 777 HK---------------Q--------KEK----QRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKG 828 (1014)
Q Consensus 777 ~~---------------q--------~~~----~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g 828 (1014)
+. . ..+ ..+ +.+|+||+||++|| +++||||||+|+||++||++||++||+|
T Consensus 423 ~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp-~l~KVLYLD~DVVV~gDLseLw~iDL~g 501 (657)
T PLN02910 423 RQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYP-KLEKILFLDDDIVVQKDLTPLWSIDMQG 501 (657)
T ss_pred HHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCchHHHHhCCcCC
Confidence 10 0 001 112 37899999999999 6999999999999999999999999999
Q ss_pred CcEEEeeccCCC-CCCCCcccccchhhhhcc-CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCCh
Q 001779 829 RPLAYTPFCDNN-KDMDGYRFWRQGFWKDHL-RGRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDL 906 (1014)
Q Consensus 829 ~~iAaV~d~~s~-~~~~g~~fw~~gyw~~~L-~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDl 906 (1014)
+++|||++|... .+...+.+|.....+.++ +..||||+|||||||++||+.++++ +..+++++. ......||+.
T Consensus 502 ~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe-~ye~w~eln---~~~~L~dqgs 577 (657)
T PLN02910 502 MVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITG-IYHYWQDLN---EDRTLWKLGS 577 (657)
T ss_pred ceEEEecccchhhhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHH-HHHHHHHhc---ccccccccCC
Confidence 999999999642 111111122211112233 3579999999999999999999999 444566542 3355679999
Q ss_pred hh---hccccCceeeeCCccccccCccc----ccccCCCeEEEccCCCCCCchhhHhh-hccccCChhhhHHHHHHHHH
Q 001779 907 PN---YAQHTVPIFSLPQEWLWCESWCG----NATKSKAKTIDLCNNPMTKEPKLQGA-RRIVSEWPDLDSEARQFTAK 977 (1014)
Q Consensus 907 LN---~v~~~~~I~~Lp~~wN~~~~wc~----~e~~~~akiIh~~~np~tk~pkl~~a-~r~~~eW~~yd~e~~~~~~~ 977 (1014)
|| .+|.+ .++.||.+||.+.-.++ .+..+.|+||||+++. +||++.+ .++++.|..|-..-..+++.
T Consensus 578 LPpgLLvF~g-~i~pLD~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~---KPWl~l~i~~Yr~~W~kYl~~d~~fl~~ 652 (657)
T PLN02910 578 LPPGLITFYN-LTYPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNY---KPWLDLAIAKYKPYWSRYVQYDNPYLQL 652 (657)
T ss_pred CChHHHHHhC-ceeecCchheecCCCCCcccccccccCcEEEEeCCCC---CcccccCcccchHHHHHHccCCChHHHh
Confidence 99 57885 99999999999975443 3357889999999964 4666665 57889999886655555543
No 21
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.88 E-value=7.1e-22 Score=213.40 Aligned_cols=202 Identities=18% Similarity=0.180 Sum_probs=147.3
Q ss_pred EEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEe-CCCChhHHHHHHHHHHHcCcEEEEEE-ecCCcccccccccccHH
Q 001779 709 IFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIK-NYLSPQFKDVIPHMAQEYGFEYELIT-YKWPTWLHKQKEKQRII 786 (1014)
Q Consensus 709 If~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~-~~LS~~~k~~L~~l~~~~~~~i~fv~-~~wp~~L~~q~~~~r~~ 786 (1014)
-++++++++|..++.+++.||++|++ .++++++. +++|++.++.|..+ +..+..+. ++++.... .....+..
T Consensus 3 y~t~~~~~~Y~~~a~vl~~SL~~~~~-~~~~~vl~~~~is~~~~~~L~~~----~~~~~~v~~i~~~~~~~-~~~~~~~~ 76 (240)
T cd02537 3 YVTLLTNDDYLPGALVLGYSLRKVGS-SYDLVVLVTPGVSEESREALEEV----GWIVREVEPIDPPDSAN-LLKRPRFK 76 (240)
T ss_pred EEEEecChhHHHHHHHHHHHHHhcCC-CCCEEEEECCCCCHHHHHHHHHc----CCEEEecCccCCcchhh-hccchHHH
Confidence 35667888999999999999999976 45666665 57999999888765 33332222 23222111 01122335
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccCCCCeeee
Q 001779 787 WAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLRGRPYHIS 866 (1014)
Q Consensus 787 ~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfNS 866 (1014)
.+|.||+++.+. +++||||||+|++|.+||.+||++ +..+||++|+. | ..||||
T Consensus 77 ~~~~kl~~~~l~--~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~---------------~------~~~fNs 130 (240)
T cd02537 77 DTYTKLRLWNLT--EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCG---------------W------PDLFNS 130 (240)
T ss_pred HHhHHHHhcccc--ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccC---------------c------cccccc
Confidence 789999999975 499999999999999999999988 66788887742 1 259999
Q ss_pred eeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCc--eeeeCCccccccCcccc-----cccCCCe
Q 001779 867 ALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVP--IFSLPQEWLWCESWCGN-----ATKSKAK 939 (1014)
Q Consensus 867 GV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~--I~~Lp~~wN~~~~wc~~-----e~~~~ak 939 (1014)
|||++|+.. ...+++.+.++. . .++...|||+||.++.+ . +..||++||++...+.. .....++
T Consensus 131 Gv~l~~~~~----~~~~~~~~~~~~---~-~~~~~~DQdiLN~~~~~-~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~ 201 (240)
T cd02537 131 GVFVLKPSE----ETFNDLLDALQD---T-PSFDGGDQGLLNSYFSD-RGIWKRLPFTYNALKPLRYLHPEALWFGDEIK 201 (240)
T ss_pred eEEEEcCCH----HHHHHHHHHHhc---c-CCCCCCCHHHHHHHHcC-CCCEeECCcceeeehhhhccCchhhcccCCcE
Confidence 999999853 455666666553 2 23677899999999986 6 99999999998654321 2346789
Q ss_pred EEEccCCCCCCchh
Q 001779 940 TIDLCNNPMTKEPK 953 (1014)
Q Consensus 940 iIh~~~np~tk~pk 953 (1014)
||||++. .|+|+
T Consensus 202 iiHf~g~--~KPW~ 213 (240)
T cd02537 202 VVHFIGG--DKPWS 213 (240)
T ss_pred EEEEeCC--CCCCC
Confidence 9999984 35554
No 22
>PLN00176 galactinol synthase
Probab=99.87 E-value=3.6e-21 Score=215.43 Aligned_cols=246 Identities=15% Similarity=0.196 Sum_probs=156.9
Q ss_pred ecCcchHHHHHHHHHHHHHcCCCCeEEEE-EeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHH
Q 001779 713 ASGHLYERFLKIMILSVLKNTCRPVKFWF-IKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKI 791 (1014)
Q Consensus 713 asg~~Ye~~l~vmI~SIl~nt~~~v~F~I-L~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~R 791 (1014)
+++..|..++.++.+||.++. ....+.+ ++++++++.++.|. ..+..|.-++.--|..-..+....+...+|.|
T Consensus 30 ~~n~~Y~~Ga~vL~~SLr~~~-s~~~lVvlVt~dVp~e~r~~L~----~~g~~V~~V~~i~~~~~~~~~~~~~~~i~~tK 104 (333)
T PLN00176 30 AGNGDYVKGVVGLAKGLRKVK-SAYPLVVAVLPDVPEEHRRILV----SQGCIVREIEPVYPPENQTQFAMAYYVINYSK 104 (333)
T ss_pred ecCcchHHHHHHHHHHHHHhC-CCCCEEEEECCCCCHHHHHHHH----HcCCEEEEecccCCcccccccccchhhhhhhh
Confidence 457799999999999998763 3333333 34789998877665 34666543332112110001111233456889
Q ss_pred HhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCC-CCCcccccchh---------hhhccC--
Q 001779 792 LFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKD-MDGYRFWRQGF---------WKDHLR-- 859 (1014)
Q Consensus 792 LfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~-~~g~~fw~~gy---------w~~~L~-- 859 (1014)
|.+..+. +++||||||+|+||.++|++||+++. | .+|||.||..... ....++|- || |...++
T Consensus 105 l~iw~l~--~ydkvlyLDaD~lv~~nid~Lf~~~~-~-~~aAV~dc~~~~~~~~~p~~~~-~~c~~~~~~~~wp~~~g~~ 179 (333)
T PLN00176 105 LRIWEFV--EYSKMIYLDGDIQVFENIDHLFDLPD-G-YFYAVMDCFCEKTWSHTPQYKI-GYCQQCPDKVTWPAELGPP 179 (333)
T ss_pred hhhcccc--ccceEEEecCCEEeecChHHHhcCCC-c-ceEEEecccccccccccccccc-cccccchhhccchhhccCC
Confidence 9999986 59999999999999999999998853 3 6899999853211 01111221 22 111121
Q ss_pred CCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCceeeeCCccccccC--ccccc--cc
Q 001779 860 GRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVPIFSLPQEWLWCES--WCGNA--TK 935 (1014)
Q Consensus 860 ~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~I~~Lp~~wN~~~~--wc~~e--~~ 935 (1014)
...||||||||+|...|+...+.+ +++. .+ ...++|||+||.+|.+ .+..||.+||++.. |+..+ ..
T Consensus 180 ~~~yFNSGVlvinps~~~~~~ll~----~l~~---~~-~~~f~DQD~LN~~F~~-~~~~Lp~~YN~~~~~~~~~~~~~~~ 250 (333)
T PLN00176 180 PPLYFNAGMFVFEPSLSTYEDLLE----TLKI---TP-PTPFAEQDFLNMFFRD-IYKPIPPVYNLVLAMLWRHPENVEL 250 (333)
T ss_pred CCCeEEeEEEEEEcCHHHHHHHHH----HHHh---cC-CCCCCCHHHHHHHHcC-cEEECCchhcCchhhhhhChhhccc
Confidence 246999999999999999766543 3332 22 3567999999999996 88999999998853 33221 14
Q ss_pred CCCeEEEccCCCCCCchh-------hH--hhhccccCCh-hhhHHHHHHHHHh
Q 001779 936 SKAKTIDLCNNPMTKEPK-------LQ--GARRIVSEWP-DLDSEARQFTAKI 978 (1014)
Q Consensus 936 ~~akiIh~~~np~tk~pk-------l~--~a~r~~~eW~-~yd~e~~~~~~~~ 978 (1014)
.+++|||||... .|+|+ .+ ..+.+...|| -|+++...+....
T Consensus 251 ~~vkIIHY~~~~-~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~ 302 (333)
T PLN00176 251 DKVKVVHYCAAG-SKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLDYKNFV 302 (333)
T ss_pred CCcEEEEeeCCC-CCCCCCCCcccCCChHHHHHHHHHHHHHhccccccccccc
Confidence 579999999521 23333 11 1233455666 5576665554433
No 23
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.73 E-value=5.1e-17 Score=178.39 Aligned_cols=204 Identities=16% Similarity=0.167 Sum_probs=145.3
Q ss_pred ecCcchHHHHHHHHHHHHHcCCCCeEEEEE-eCCCChhHHHHHHH---HHHHcCcEEEEEEecCCcccccccccccHHHH
Q 001779 713 ASGHLYERFLKIMILSVLKNTCRPVKFWFI-KNYLSPQFKDVIPH---MAQEYGFEYELITYKWPTWLHKQKEKQRIIWA 788 (1014)
Q Consensus 713 asg~~Ye~~l~vmI~SIl~nt~~~v~F~IL-~~~LS~~~k~~L~~---l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~ 788 (1014)
+++..|...+.++..|+.++.. ..+..++ ++.++......+.. +....+..+..+..--+ +. ...++..+
T Consensus 7 ~Tn~~YL~gAlvL~~sLr~~gs-~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~----~~-~~~~~~~~ 80 (278)
T cd06914 7 ATNADYLCNALILFEQLRRLGS-KAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIA----SG-GDAYWAKS 80 (278)
T ss_pred ecChhHHHHHHHHHHHHHHhCC-CCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccC----CC-CCccHHHH
Confidence 4578999999999999987654 4444444 46666544333221 12344555554443211 11 23456677
Q ss_pred HHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccCCCCeeeeee
Q 001779 789 YKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLRGRPYHISAL 868 (1014)
Q Consensus 789 Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfNSGV 868 (1014)
|.||.+..+ + +++||||||+|++|.++|.+||+++.. ..+||+ ++ || ||||||
T Consensus 81 ~tKl~~~~l-~-~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap-~~---------------~~--------~FNSGv 133 (278)
T cd06914 81 LTKLRAFNQ-T-EYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAP-RA---------------YW--------KFASHL 133 (278)
T ss_pred HHHHHhccc-c-ceeeEEEecCChhhhcChHHHhcCCcc-cceeee-cC---------------cc--------eeccee
Confidence 999999999 3 699999999999999999999999843 345553 21 23 999999
Q ss_pred EEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCc-------eeeeCCc-cccccC------------
Q 001779 869 YVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVP-------IFSLPQE-WLWCES------------ 928 (1014)
Q Consensus 869 ~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~-------I~~Lp~~-wN~~~~------------ 928 (1014)
||||+..|+..++.+++...... .....|||+||.++.+ . +..||.+ ||....
T Consensus 134 mvi~ps~~~~~~l~~~~~~~~~~------~~~~~DQdiLN~~~~~-~~~~~~~~~~~Lp~~~y~llt~~~r~~~~~~~l~ 206 (278)
T cd06914 134 MVIKPSKEAFKELMTEILPAYLN------KKNEYDMDLINEEFYN-SKQLFKPSVLVLPHRQYGLLTGEFREKLHKSFLS 206 (278)
T ss_pred EEEeCCHHHHHHHHHHHHHhccc------CCCCCChHHHHHHHhC-CccccCcceEEcCccccccCChhhcccCHHHhhc
Confidence 99999999999998888876531 1245799999999997 5 8899997 987542
Q ss_pred --------cccccccCCCeEEEccCCCCCCchhhHh
Q 001779 929 --------WCGNATKSKAKTIDLCNNPMTKEPKLQG 956 (1014)
Q Consensus 929 --------wc~~e~~~~akiIh~~~np~tk~pkl~~ 956 (1014)
|-.++..+++|+|||...|.-|+|....
T Consensus 207 ~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 207 NAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred cccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 2222334789999999999888886543
No 24
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=97.20 E-value=0.0085 Score=65.97 Aligned_cols=220 Identities=16% Similarity=0.138 Sum_probs=121.5
Q ss_pred cCCeeEEEEeecCcchHHHHHHHHHHHHHcC--CCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEec----CCccc
Q 001779 703 HGKTINIFSIASGHLYERFLKIMILSVLKNT--CRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYK----WPTWL 776 (1014)
Q Consensus 703 ~~~~InIf~vasg~~Ye~~l~vmI~SIl~nt--~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~----wp~~L 776 (1014)
.+-+|-|.++|.| .|..++.-.+.|.=+|- ..++++||++|.-+. ++.+.-.-+.++..+.+. ||.
T Consensus 32 ~n~tIgl~vfatG-kY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~-----~p~v~lg~~r~~~V~~v~~~~~W~~-- 103 (271)
T cd02515 32 QNITIGLTVFAVG-KYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAA-----VPEVELGPGRRLTVLKIAEESRWQD-- 103 (271)
T ss_pred cCCEEEEEEEEec-cHHHHHHHHHHHHHHhccCCCeeEEEEEeCCccc-----CcccccCCCceeEEEEeccccCCcH--
Confidence 4667999888887 78999999999999884 468999999984331 222221112344444442 332
Q ss_pred ccccccccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCch-HHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhh
Q 001779 777 HKQKEKQRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMG-ELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWK 855 (1014)
Q Consensus 777 ~~q~~~~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~-eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~ 855 (1014)
.+-+...++.......++ .++|-+.++|+|+++.+.+. |.. |..+|...-....+....+.|-+..--.
T Consensus 104 ----~sl~Rm~~~~~~~~~~~~-~e~DYlF~~dvd~~F~~~ig~E~L-----g~lva~lHp~~y~~~~~~fpYERrp~S~ 173 (271)
T cd02515 104 ----ISMRRMKTLADHIADRIG-HEVDYLFCMDVDMVFQGPFGVETL-----GDSVAQLHPWWYGKPRKQFPYERRPSSA 173 (271)
T ss_pred ----HHHHHHHHHHHHHHHhhc-ccCCEEEEeeCCceEeecCCHHHh-----hhhheecChhhhcCCCCCCCCcCCCCcc
Confidence 111112222222223334 57999999999999998876 322 1233332111111111222222211111
Q ss_pred hcc---CCCCeeeeeeEEEehHHHHhhcHHHHHHHHHHH-hccCCCCCCCCCCChhhhccccCc-eeeeCCccccccCcc
Q 001779 856 DHL---RGRPYHISALYVVDLKRFRETAAGDNLRVFYET-LSKDPNSLANLDQDLPNYAQHTVP-IFSLPQEWLWCESWC 930 (1014)
Q Consensus 856 ~~L---~~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~-Ls~d~~sL~~~DQDlLN~v~~~~~-I~~Lp~~wN~~~~wc 930 (1014)
-++ .|..|+-+|++==-.+.+.+. .+.|...+.. +.++.. -.+.|..-||..|...+ ++.|+++|+|.+.+.
T Consensus 174 AyIp~~eGdfYy~Ga~~GG~~~~vl~l--~~~c~~~i~~D~~n~I~-A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e~~~ 250 (271)
T cd02515 174 AYIPEGEGDFYYHGAVFGGSVEEVYRL--TRACHEGILADKANGIE-ARWHDESHLNKYFLLHKPTKVLSPEYLWDDRIG 250 (271)
T ss_pred ccccCCCCCeEEeeeecCccHHHHHHH--HHHHHHHHHHHHhCCce-EEeecHhHhHHHHhhCCCCeecChhhcCCccCC
Confidence 122 256788777764444444332 2334333322 212211 25789999999886544 999999999998654
Q ss_pred cccccCCCeEEEc
Q 001779 931 GNATKSKAKTIDL 943 (1014)
Q Consensus 931 ~~e~~~~akiIh~ 943 (1014)
.....+.+++++.
T Consensus 251 ~p~~~k~~r~~~~ 263 (271)
T cd02515 251 QAAEIRLPRLSWL 263 (271)
T ss_pred CCcccceeEEEEe
Confidence 4434445555554
No 25
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.05 E-value=0.0002 Score=78.90 Aligned_cols=149 Identities=19% Similarity=0.147 Sum_probs=86.7
Q ss_pred cccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccC-C----CCCCCCcccc-------
Q 001779 782 KQRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCD-N----NKDMDGYRFW------- 849 (1014)
Q Consensus 782 ~~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~-s----~~~~~g~~fw------- 849 (1014)
..|+...+.+|-+-+.- +.|||||||+|.||+.++.+||++. -+-+++.||.. + .++..| -||
T Consensus 150 ~~rw~~mftKLrVfeqt--EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~-i~~~ft~~fa 224 (368)
T COG5597 150 FHRWLDMFTKLRVFEQT--EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSG-IFVSFTPAFA 224 (368)
T ss_pred cCcHHHHhHHHHhhhhh--hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCc-cceeecHHHH
Confidence 35666677777776664 5999999999999999999999876 23455555531 1 111111 122
Q ss_pred ----------------c---chhhhhccC-CCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhh
Q 001779 850 ----------------R---QGFWKDHLR-GRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNY 909 (1014)
Q Consensus 850 ----------------~---~gyw~~~L~-~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~ 909 (1014)
. ++.|+..-+ .+-|||||+||++-.+..-..+..-. +=++-.| .....|.++|.
T Consensus 225 ayg~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~a---lPklydd---a~mmeqsllnl 298 (368)
T COG5597 225 AYGKMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFA---LPKLYDD---ADMMEQSLLNL 298 (368)
T ss_pred hhcccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHh---hHHhhhh---hhHHHHHHHHH
Confidence 1 122222222 24689999999987775443322111 1111011 11235788887
Q ss_pred cccc-C--ceeeeCCccccccCcccccccCCCeEEEc
Q 001779 910 AQHT-V--PIFSLPQEWLWCESWCGNATKSKAKTIDL 943 (1014)
Q Consensus 910 v~~~-~--~I~~Lp~~wN~~~~wc~~e~~~~akiIh~ 943 (1014)
.... + |+-.|+.+|| .-|..+....-.|.+|.
T Consensus 299 aYn~~g~FPwerld~~yN--G~wa~~ndlPylka~Hg 333 (368)
T COG5597 299 AYNYEGFFPWERLDPRYN--GYWADANDLPYLKAWHG 333 (368)
T ss_pred HHhhhccCchhhcCcccc--cccccccccchHHHhhc
Confidence 7543 3 6778888888 66766544444444554
No 26
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=96.89 E-value=0.018 Score=65.15 Aligned_cols=224 Identities=15% Similarity=0.102 Sum_probs=111.6
Q ss_pred cCCeeEEEEeecCcchHHHHHHHHHHHHHcC--CCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccc
Q 001779 703 HGKTINIFSIASGHLYERFLKIMILSVLKNT--CRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQK 780 (1014)
Q Consensus 703 ~~~~InIf~vasg~~Ye~~l~vmI~SIl~nt--~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~ 780 (1014)
.+-+|=+.++|.| .|..++.-.+.|.=+|- ..+|++||++|..+ .++.+.-.-+-.+..+.+. ...+-|-
T Consensus 97 ~n~tIGL~vfA~G-kY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~-----~vP~i~l~~~r~~~V~~v~--~~~~Wqd 168 (337)
T PF03414_consen 97 QNITIGLTVFATG-KYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPS-----KVPRIELGPGRRLKVFEVQ--EEKRWQD 168 (337)
T ss_dssp CT-EEEEEEEE-C-CHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GG-----GS------TTEEEEEEE-S--GGSSHHH
T ss_pred cCceEEEEEEecc-cHHHHHHHHHHhHHHhccCCcEEEEEEEeCchh-----hCCccccCCCceeEEEEec--ccCCCcc
Confidence 4567888888777 78999999999999883 46899999998543 2343332223455555552 1000010
Q ss_pred ccccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCchH-HHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccC
Q 001779 781 EKQRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGE-LYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLR 859 (1014)
Q Consensus 781 ~~~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~e-L~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~ 859 (1014)
.+-+.+.+........++ .++|-+.++|+|+++.+++.. .. |..+|...-..-.+....+.|-+..--.-+++
T Consensus 169 ~sm~Rm~~i~~~i~~~~~-~EvDYLFc~dvd~~F~~~vGvE~L-----g~lva~LHp~~y~~~~~~FpYERrp~S~AyIp 242 (337)
T PF03414_consen 169 ISMMRMEMISEHIEQHIQ-HEVDYLFCMDVDMVFQDHVGVEIL-----GDLVATLHPWFYFKPRESFPYERRPKSQAYIP 242 (337)
T ss_dssp HHHHHHHHHHHHHHHCHH-HH-SEEEEEESSEEE-S-B-GGG------SSEEEEESTTTTTSTGGGS--B-STTSTTB--
T ss_pred chhHHHHHHHHHHHHHHh-hcCCEEEEEecceEEecccCHHHH-----HHHHHHhCHHHHCCChhhCccccCcccccccc
Confidence 000111122222223344 579999999999999988763 22 44555442211111112222222211111232
Q ss_pred ---CCCeeeeeeEEEehHHHHhhcHHHHHHHHH-HHhccCCCCCCCCCCChhhhccc-cCceeeeCCccccccCcccccc
Q 001779 860 ---GRPYHISALYVVDLKRFRETAAGDNLRVFY-ETLSKDPNSLANLDQDLPNYAQH-TVPIFSLPQEWLWCESWCGNAT 934 (1014)
Q Consensus 860 ---~~~YfNSGV~LiNL~~wR~~~~~dklr~~~-q~Ls~d~~sL~~~DQDlLN~v~~-~~~I~~Lp~~wN~~~~wc~~e~ 934 (1014)
|..|+-+|++==-..++.+. ++.|...+ +.+.++... .+.|..-||..+. +.|.+.|+++|+|.+.+-....
T Consensus 243 ~~eGDfYY~ga~fGGt~~~vl~L--t~~c~~~i~~D~~n~I~A-~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~~~~p~~ 319 (337)
T PF03414_consen 243 YGEGDFYYHGAFFGGTVEEVLRL--TEACHQGIMQDKANGIEA-LWHDESHLNKYFLYHKPTKVLSPEYCWDERFGWPPQ 319 (337)
T ss_dssp TT--S--EECCEEEECHHHHHHH--HHHHHHHHHHHHHTT----TTCHHHHHHHHHHHS--SEEE-GGGSBSHHHSS-TT
T ss_pred CCCCCeEEeceecCCcHHHHHHH--HHHHHHHHHhhhhcCceE-eccchhhhHHHHhhCCCceecCHHHccCccCCCCcc
Confidence 56888888876555554443 33343333 223233333 3679999999763 5689999999999887644444
Q ss_pred cCCCeEEEc
Q 001779 935 KSKAKTIDL 943 (1014)
Q Consensus 935 ~~~akiIh~ 943 (1014)
.+..|+++.
T Consensus 320 ik~vr~~~~ 328 (337)
T PF03414_consen 320 IKIVRFSWV 328 (337)
T ss_dssp ESSSSEEES
T ss_pred cceEEEEEe
Confidence 556666654
No 27
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=96.56 E-value=1.2 Score=57.86 Aligned_cols=384 Identities=17% Similarity=0.152 Sum_probs=180.1
Q ss_pred hHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceecccchH---HHHHHHHHHHHHHHHHHhccccCCcchHHHH
Q 001779 36 MLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSESSEE---ALLNAMNDELQRIQEQVYYGNINSYTDVLEK 112 (1014)
Q Consensus 36 ~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~~de~---~l~~~i~~~lq~IQ~aVY~G~i~dd~dV~d~ 112 (1014)
++...--+++....+++.+..+++.|+...--.+++||..++.+.- .++..+-.|.+.+-+=.=.| |+ +..+..+
T Consensus 327 ~Ls~~~Vn~~lr~ei~~nq~~~~~~~v~~g~~~L~INGl~~di~~~DlfsLld~lk~E~~~~~~f~~lg-i~-~~~l~~~ 404 (1470)
T KOG1879|consen 327 SLSKQSVNEDLRTEIEENQSKLEAKGVPPGDNALFINGLNLDIDSLDLFSLLDLLKQEKKMLNGFHNLG-ID-GEFLSKL 404 (1470)
T ss_pred HHHHHHhhHHHHHHHHHhhhhhhhcCCCCCcceeEecccccCcccccHHHHHHHHHHHHHHHHHHHhcC-Cc-hhHHHHh
Confidence 3444444566667777777777777885555678899999988873 66666666666555444344 22 2233322
Q ss_pred H-HhcccccccCceeccCCCCCCeEeecccc---c----ccchhhhccCceecCCCCCCCC--cceEEEEEEeCCChhHH
Q 001779 113 V-LSESGINRYNPQIITDAKVKPKFISLASS---F----LGRETELKDINYLHSPETVDDV--KPVTHLLAVDVTSKKGM 182 (1014)
Q Consensus 113 f-L~qna~pRrN~~Ilp~~~~~~~~~~l~~~---~----~~~~~~~~~~~y~~~~~~~~~~--~~~t~wvv~D~~~~~g~ 182 (1014)
+ |+-.... .-++-+.=....+.|+|=... + ...+.++. |++. +.-..+ ..-++..|.|..+++|+
T Consensus 405 l~l~~~~~~-~~~~~~Dir~~~v~~vNdlEsD~~Y~~w~~Svq~lL~--P~~P--G~lr~IrkNl~nlV~vIDpa~~~~~ 479 (1470)
T KOG1879|consen 405 LKLDLSKSE-KQEYAVDIRSEAVIWVNDLESDPQYDRWPSSVQLLLK--PTFP--GQLRPIRKNLFNLVFVIDPATPEDL 479 (1470)
T ss_pred hccccCccc-ccceeeecccccceeecccccchhhcchhHHHHHHhC--CCCC--CcchHHHhhheeEEEEecCCCccch
Confidence 2 1110000 111111100112333321111 1 12223332 2331 111111 13566779999999999
Q ss_pred HHHHHHHHHHhcCCCceEEEEeecCCCCCCCcchHHHHHHHHHhhcccch---hhHHHHHHHHhhhhhhhhhhccccccc
Q 001779 183 KLLHEGIRFLIGGSNGARLGVLFSASREADLPSIIFVKAFEITASTYSHK---KKVLEFLDQLCSFYERTYLLASSATAD 259 (1014)
Q Consensus 183 ~ll~~al~~~~~~s~~~Rv~~ihNp~~~~~~~~~~~~~~~~aa~~~~~~~---~~~~~~l~~l~~~~~~~~~~~~~~~~~ 259 (1014)
.++..|..+. ...-.+|+|+|.-..++.....+.+..+|+.|+...+.. ..+..||.++...... ..
T Consensus 480 ~~l~~~~~f~-s~~~P~R~G~v~~~nd~~~d~~~d~g~av~~af~yi~~~~d~~~Alk~l~~~~~~~~~---------~~ 549 (1470)
T KOG1879|consen 480 EFLKTARNFV-SHQIPVRIGFVFIANDDDEDGVTDLGVAVLRAFNYISEESDNLTALKFLTNIYSDVRS---------DE 549 (1470)
T ss_pred HHHHHHHHHh-cCCCceEEEEEEEecCCcccchhhHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhcc---------cc
Confidence 9999999886 455789999997544433322223444455554433322 3455555555221110 11
Q ss_pred hhH-HHHHHHHHHHHhcCCChHHHhhhcCccchhhHHHHH-HHHHHHHHHHhCCCCCCceEEEccEEecCCCCCCCCHhh
Q 001779 260 STQ-AFIDKVCEFAEANGLSSKVYRASLPEYSKGKVRKQL-NKVVQFLHRQLGVESGANAVITNGRVTFPIDESTFLSHD 337 (1014)
Q Consensus 260 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~NGR~i~~~~~~~~~~~d 337 (1014)
... +-++.+. .+.++-...... +..+....+- .....|+++ +||.+ .+-+++||++++.++.... .
T Consensus 550 ~~~~e~v~~~~----~~~~~~~~~~~i---l~~~s~~d~~~~~~~~fv~~-lGl~~-~p~vL~NG~i~~~~~~~~~---~ 617 (1470)
T KOG1879|consen 550 YVLVEHVKGVF----ENTLPNAKKDDI---LGIDSTYDEGRKAGFSFVQE-LGLDS-LPSVLLNGEIFDHESNAWD---L 617 (1470)
T ss_pred hhHHHhhhHHH----Hhhccccchhhh---hccccchhhcchHHHHHHHH-hCCCc-cCeeeECCeeccccccccc---h
Confidence 111 1111111 111100000000 0111111222 335666665 79988 8899999999987543322 2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhcccCCCCCCCcccccchhhhhhhhhhhc-ccccccCCcc----ccccc-cccc----
Q 001779 338 LSLLESVEFKHRIKHIWEIIEEVNWQETYPDIDPDMLTSKFVSDIILFVTS-SMAMRDRSSE----SARFE-ILSA---- 407 (1014)
Q Consensus 338 ~~~l~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~----~~~~~-~~~~---- 407 (1014)
+..+--+....+..+..++-.=.+.+ .....+..|-..+ ..-.++++.. -.++. .++.
T Consensus 618 -e~~i~~~i~~~t~~iQ~av~~G~l~d-----------~~~~~d~ll~~~~v~~R~N~~i~~~~~~~~~v~s~l~~~~k~ 685 (1470)
T KOG1879|consen 618 -EESILQEIMKDTPFIQRAVYEGKLED-----------DQNVVDFLLEQKSVLPRINKRILSGSKFLDSVVSILSSTDKS 685 (1470)
T ss_pred -HHHHHHHHHhhhHHHHHHHHcCCCcc-----------chHHHHHHHhCccccccccccccccccchhhHHhhhcchhhh
Confidence 44444444444555554443211110 0011111122211 1111111111 00010 0000
Q ss_pred ---ccce-EEeCC---CCceEEEEEEecCCCcchhhHHH-HHHHHhccCCCeEEEEEccCC
Q 001779 408 ---EYSA-VVFNS---ENSTIHIDAVIDPLSPTGQKLSS-LLRVLQRYAQPSMRIVLNPMS 460 (1014)
Q Consensus 408 ---~~s~-~~~~~---~~~~~~i~~ivDPlse~aQk~~~-ll~~l~~~~~v~i~i~lnp~~ 460 (1014)
.+.. ...++ ....+.+.+|=|=-+..+.|++. .++.+..-.+++|-++-||..
T Consensus 686 ~~~~~~~~Yl~~~~~~~~~~vT~wlvaDf~~~~grklL~~al~~~~~s~~~Ri~~I~np~s 746 (1470)
T KOG1879|consen 686 AVLLKNVNYLTKKTEESNLPVTIWLVADFESPSGRKLLTNALDYLKSSKNARIGLIPNPSS 746 (1470)
T ss_pred hHHHhhccccccCchhhccceEEEEEcccCChhHHHHHHHHHHHHhccccceEEEecCchh
Confidence 0001 11122 12368888888988888887765 566677656666666777754
No 28
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=96.05 E-value=0.014 Score=65.02 Aligned_cols=109 Identities=19% Similarity=0.235 Sum_probs=70.2
Q ss_pred EEEeecCcchHHHHHHHHHHHHHcC-CCCeEEEEEe-CCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHH
Q 001779 709 IFSIASGHLYERFLKIMILSVLKNT-CRPVKFWFIK-NYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRII 786 (1014)
Q Consensus 709 If~vasg~~Ye~~l~vmI~SIl~nt-~~~v~F~IL~-~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~ 786 (1014)
|+.++ |..|...+..+|..+.+.. +-||-++.-. +.+++++++.|.. ..++.++++. +..........-..
T Consensus 4 IVi~~-g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~-----~q~v~~vd~~-~~~~~~~~~~~~~~ 76 (271)
T PF11051_consen 4 IVITA-GDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLP-----DQDVWFVDAS-CVIDPDYLGKSFSK 76 (271)
T ss_pred EEEEe-cCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhh-----hhhhheecce-EEeecccccccccc
Confidence 45555 4477777777777776532 2488888776 7899999887766 2344455543 11111111000000
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcC
Q 001779 787 WAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMD 825 (1014)
Q Consensus 787 ~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlD 825 (1014)
..|..-.+..+|. ..+.|||||+|.|...|+..||+..
T Consensus 77 ~~~~~K~lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 77 KGFQNKWLALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred CCchhhhhhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 1455556677785 7999999999999999999999754
No 29
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=94.80 E-value=0.077 Score=56.32 Aligned_cols=139 Identities=19% Similarity=0.196 Sum_probs=75.9
Q ss_pred HHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhccCCCCeeeeee
Q 001779 789 YKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHLRGRPYHISAL 868 (1014)
Q Consensus 789 Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L~~~~YfNSGV 868 (1014)
.+--++-.++-..+ .|+|+|+|++..+|+.+++ +-.+.-+.+..|+...... + +....+|+|+
T Consensus 54 ~K~~~~~~~L~~G~-~vl~~D~Dvv~~~dp~~~~--~~~~~Di~~~~d~~~~~~~-----~---------~~~~~~n~G~ 116 (212)
T PF03407_consen 54 LKPKVLLDLLELGY-DVLFSDADVVWLRDPLPYF--ENPDADILFSSDGWDGTNS-----D---------RNGNLVNTGF 116 (212)
T ss_pred HHHHHHHHHHHcCC-ceEEecCCEEEecCcHHhh--ccCCCceEEecCCCcccch-----h---------hcCCccccce
Confidence 34444455555544 5999999999999999999 2244445555455321100 0 1123459999
Q ss_pred EEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhcccc-------CceeeeCCccc------ccc----Cccc
Q 001779 869 YVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHT-------VPIFSLPQEWL------WCE----SWCG 931 (1014)
Q Consensus 869 ~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~-------~~I~~Lp~~wN------~~~----~wc~ 931 (1014)
+.+--.. +-..+.+.+...+. ..+. ..||.++|.++.. ..+..||...- ++. .|+.
T Consensus 117 ~~~r~t~-~~~~~~~~w~~~~~---~~~~---~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~ 189 (212)
T PF03407_consen 117 YYFRPTP-RTIAFLEDWLERMA---ESPG---CWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVP 189 (212)
T ss_pred EEEecCH-HHHHHHHHHHHHHH---hCCC---cchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhc
Confidence 9984333 22222333333333 2221 1399999998765 23677887543 111 1111
Q ss_pred ccccCCCeEEEccCCCCCCchhh
Q 001779 932 NATKSKAKTIDLCNNPMTKEPKL 954 (1014)
Q Consensus 932 ~e~~~~akiIh~~~np~tk~pkl 954 (1014)
. ..++.++|...-. .++.|+
T Consensus 190 ~--~~~p~~vH~n~~~-g~~~K~ 209 (212)
T PF03407_consen 190 T--KNKPYIVHANCCD-GKEGKR 209 (212)
T ss_pred c--ccccceEEEcCCC-ChHhHH
Confidence 1 4578889975433 344443
No 30
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A.
Probab=88.82 E-value=1.7 Score=38.76 Aligned_cols=52 Identities=19% Similarity=0.411 Sum_probs=38.1
Q ss_pred EEEEeccCCCCCCCceEEEEecCCCCcccceEEeccceeeeee-eCCceeEEEe
Q 001779 550 LTGHCSEKDHEPPQGLQLILGTKSTPHLVDTLVMANLGYWQMK-VSPGVWYLQL 602 (1014)
Q Consensus 550 ieGh~~d~~~~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlk-a~pg~~~l~l 602 (1014)
|.|..+|.+..|..|+.+.|.+..+.. ..+.+=..-|+|.|. .+||.|.|.+
T Consensus 2 I~G~V~d~~g~pv~~a~V~l~~~~~~~-~~~~~Td~~G~f~~~~l~~g~Y~l~v 54 (82)
T PF13620_consen 2 ISGTVTDATGQPVPGATVTLTDQDGGT-VYTTTTDSDGRFSFEGLPPGTYTLRV 54 (82)
T ss_dssp EEEEEEETTSCBHTT-EEEET--TTTE-CCEEE--TTSEEEEEEE-SEEEEEEE
T ss_pred EEEEEEcCCCCCcCCEEEEEEEeeCCC-EEEEEECCCceEEEEccCCEeEEEEE
Confidence 789999986699999999999775554 445555556999998 8999999987
No 31
>cd03019 DsbA_DsbA DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.
Probab=88.30 E-value=29 Score=35.21 Aligned_cols=144 Identities=9% Similarity=0.049 Sum_probs=78.9
Q ss_pred CcceEEEEEEeCCChhHHHHHHHHHHHHhcCCCceEEEEeecCCCCCCCcchHHHHHHHHHhhcccchhhHHHHHHHHhh
Q 001779 165 VKPVTHLLAVDVTSKKGMKLLHEGIRFLIGGSNGARLGVLFSASREADLPSIIFVKAFEITASTYSHKKKVLEFLDQLCS 244 (1014)
Q Consensus 165 ~~~~t~wvv~D~~~~~g~~ll~~al~~~~~~s~~~Rv~~ihNp~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~l~~l~~ 244 (1014)
..++++.+..|+..+-=+.+-..--+.+.+...++|+.++|.+-.... +...+++..++.. .. ....|...+.+
T Consensus 14 ~~~~~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~aa~a~~aa~~-~~---~~~~~~~~lf~ 87 (178)
T cd03019 14 SGKPEVIEFFSYGCPHCYNFEPILEAWVKKLPKDVKFEKVPVVFGGGE--GEPLARAFYAAEA-LG---LEDKLHAALFE 87 (178)
T ss_pred CCCcEEEEEECCCCcchhhhhHHHHHHHHhCCCCceEEEcCCcccccc--chHHHHHHHHHHH-cC---cHhhhhHHHHH
Confidence 346899999999999888776555444444456788887776643321 2344555555432 22 12233333322
Q ss_pred hhhhhhhhccccccchhHHHHHHHHHHHHhcCCChHHHhhhcCccchhhHHHHHHHHHHHHHHHhCCCCCCceEEEccEE
Q 001779 245 FYERTYLLASSATADSTQAFIDKVCEFAEANGLSSKVYRASLPEYSKGKVRKQLNKVVQFLHRQLGVESGANAVITNGRV 324 (1014)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~NGR~ 324 (1014)
..... .....+ .+.+.+.++..|++.+.+...+.+ +...+.+........ .+|+. |.+.+++||+.
T Consensus 88 ~~~~~--------~~~~~~-~~~l~~~a~~~Gl~~~~~~~~~~s---~~~~~~i~~~~~~~~-~~gi~-gTPt~iInG~~ 153 (178)
T cd03019 88 AIHEK--------RKRLLD-PDDIRKIFLSQGVDKKKFDAAYNS---FSVKALVAKAEKLAK-KYKIT-GVPAFVVNGKY 153 (178)
T ss_pred HHHHh--------CCCCCC-HHHHHHHHHHhCCCHHHHHHHHhC---HHHHHHHHHHHHHHH-HcCCC-CCCeEEECCEE
Confidence 11100 000100 123444566778888888776643 233333333433333 35665 88999999998
Q ss_pred ecCC
Q 001779 325 TFPI 328 (1014)
Q Consensus 325 i~~~ 328 (1014)
+...
T Consensus 154 ~~~~ 157 (178)
T cd03019 154 VVNP 157 (178)
T ss_pred EECh
Confidence 8543
No 32
>PF13462 Thioredoxin_4: Thioredoxin; PDB: 3FEU_A 3HZ8_A 3DVW_A 3A3T_E 3GMF_A 1Z6M_A 3GYK_C 3BCK_A 3BD2_A 3BCI_A ....
Probab=87.88 E-value=15 Score=36.61 Aligned_cols=148 Identities=19% Similarity=0.229 Sum_probs=74.4
Q ss_pred cceEEEEEEeCCChhHHHHHHHHHHHHhc--CCCceEEEEeecCCCCCCCcchHHHHHHHHHhhcccchhhHHHHHHHHh
Q 001779 166 KPVTHLLAVDVTSKKGMKLLHEGIRFLIG--GSNGARLGVLFSASREADLPSIIFVKAFEITASTYSHKKKVLEFLDQLC 243 (1014)
Q Consensus 166 ~~~t~wvv~D~~~~~g~~ll~~al~~~~~--~s~~~Rv~~ihNp~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~l~~l~ 243 (1014)
.++++-+..|+..+.=+++-..-.+.+.+ ....+++-+.|.|..... +.....+..++ ... ++...++++++
T Consensus 12 a~~~v~~f~d~~Cp~C~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~--~~~a~~~~~~~---~~~-~~~~~~~~~~~ 85 (162)
T PF13462_consen 12 APITVTEFFDFQCPHCAKFHEELEKLLKKYIDPGKVKFVFRPVPLDKHS--SLRAAMAAECV---ADQ-GKYFWFFHELL 85 (162)
T ss_dssp TSEEEEEEE-TTSHHHHHHHHHHHHHHHHHTTTTTEEEEEEESSSSHHH--HHHHHHHHHHH---HHH-THHHHHHHHHH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHhhhhhhccCCCceEEEEEEccccchh--HHHHHHHHHHH---HHH-hHHHHHHHHHH
Confidence 36889999999999998874444333332 256888888888865322 11112221111 111 12223334433
Q ss_pred hhhhhhhhhccccccchhHHHHHHHHHHHHhcCCChHHHhhhcCccchhhHHHHHHHHHHHHHHHhCCCCCCceEEEccE
Q 001779 244 SFYERTYLLASSATADSTQAFIDKVCEFAEANGLSSKVYRASLPEYSKGKVRKQLNKVVQFLHRQLGVESGANAVITNGR 323 (1014)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~NGR 323 (1014)
...... . . . ..+ + .+..+.....+.+++.+ ..+...+....... +..|+. |.+.+++||+
T Consensus 86 ~~~~~~-~-~-----~-~~~----i---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~i~-~tPt~~inG~ 145 (162)
T PF13462_consen 86 FSQQEN-F-E-----N-KKD----I---AANAGGSNEQFNKCLNS---DEIKAQLEADSQLA-RQLGIT-GTPTFFINGK 145 (162)
T ss_dssp HHHCHS-T-S-----S-HHH----H---HHHTTSHHHHHHHHHTS---HHHHHHHHHHHHHH-HHHT-S-SSSEEEETTC
T ss_pred HHhhhc-c-c-----h-hHH----H---HHHcCCCHHHHHHHhhc---hHHHHHHHHHHHHH-HHcCCc-cccEEEECCE
Confidence 211110 0 0 0 010 1 11223333444444432 22333334444444 345776 8999999999
Q ss_pred EecCCCCCCCCHhhHHHHHH
Q 001779 324 VTFPIDESTFLSHDLSLLES 343 (1014)
Q Consensus 324 ~i~~~~~~~~~~~d~~~l~~ 343 (1014)
++. ...+.+++..++.
T Consensus 146 ~~~----~~~~~~~l~~~Id 161 (162)
T PF13462_consen 146 YVV----GPYTIEELKELID 161 (162)
T ss_dssp EEE----TTTSHHHHHHHHH
T ss_pred EeC----CCCCHHHHHHHHc
Confidence 983 3477788887764
No 33
>PF13715 DUF4480: Domain of unknown function (DUF4480)
Probab=80.50 E-value=11 Score=34.07 Aligned_cols=48 Identities=23% Similarity=0.448 Sum_probs=37.9
Q ss_pred EEEEeccCCC-CCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEe
Q 001779 550 LTGHCSEKDH-EPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQL 602 (1014)
Q Consensus 550 ieGh~~d~~~-~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l 602 (1014)
|.|.-.|..+ .|..|+-+.+.+.... .+=..-|+|.|++++|-+.|.+
T Consensus 2 i~G~V~d~~t~~pl~~a~V~~~~~~~~-----~~Td~~G~F~i~~~~g~~~l~i 50 (88)
T PF13715_consen 2 ISGKVVDSDTGEPLPGATVYLKNTKKG-----TVTDENGRFSIKLPEGDYTLKI 50 (88)
T ss_pred EEEEEEECCCCCCccCeEEEEeCCcce-----EEECCCeEEEEEEcCCCeEEEE
Confidence 5788888885 9999999999876422 2223459999999999999987
No 34
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=79.22 E-value=11 Score=36.54 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=63.7
Q ss_pred EEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHH
Q 001779 709 IFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWA 788 (1014)
Q Consensus 709 If~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~ 788 (1014)
|+..+.+. ...+.-++.|+++.+..++.++|+.++-+++..+.+..+.+ .+..++++... .- .+...+
T Consensus 2 vvip~~n~--~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~-~~~~i~~i~~~--~n-------~g~~~~ 69 (169)
T PF00535_consen 2 VVIPTYNE--AEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAE-SDPNIRYIRNP--EN-------LGFSAA 69 (169)
T ss_dssp EEEEESS---TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHC-CSTTEEEEEHC--CC-------SHHHHH
T ss_pred EEEEeeCC--HHHHHHHHHHHhhccCCCEEEEEeccccccccccccccccc-ccccccccccc--cc-------cccccc
Confidence 34444554 56778899999988777899999999888899888888876 44555555553 10 111111
Q ss_pred HHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHhc
Q 001779 789 YKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYDM 824 (1014)
Q Consensus 789 Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~dl 824 (1014)
. ...+... .-+-|+++|+|.++..+ +.+|++.
T Consensus 70 ~-n~~~~~a---~~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 70 R-NRGIKHA---KGEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp H-HHHHHH-----SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred c-ccccccc---ceeEEEEeCCCceEcHHHHHHHHHH
Confidence 1 1122222 23599999999999887 7777755
No 35
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=75.88 E-value=16 Score=33.95 Aligned_cols=54 Identities=26% Similarity=0.461 Sum_probs=46.9
Q ss_pred eEEEEEEeccCCCCCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEe
Q 001779 547 ALVLTGHCSEKDHEPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQL 602 (1014)
Q Consensus 547 ~ilieGh~~d~~~~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l 602 (1014)
-.+|.|... ...+|..|.-..|.++++....+..+-++ |=|-|=|.||.|.++.
T Consensus 7 e~VItG~V~-~~G~Pv~gAyVRLLD~sgEFtaEvvts~~-G~FRFfaapG~WtvRa 60 (85)
T PF07210_consen 7 ETVITGRVT-RDGEPVGGAYVRLLDSSGEFTAEVVTSAT-GDFRFFAAPGSWTVRA 60 (85)
T ss_pred eEEEEEEEe-cCCcCCCCeEEEEEcCCCCeEEEEEecCC-ccEEEEeCCCceEEEE
Confidence 567899887 44589999999999999998888877777 9999999999999975
No 36
>cd03023 DsbA_Com1_like DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.
Probab=75.67 E-value=83 Score=30.69 Aligned_cols=136 Identities=18% Similarity=0.167 Sum_probs=75.2
Q ss_pred cceEEEEEEeCCChhHHHHHHHHHHHHhcCCCceEEEEeecCCCCCCCcchHHHHHHHHHhhcccchhhHHHHHHHHhhh
Q 001779 166 KPVTHLLAVDVTSKKGMKLLHEGIRFLIGGSNGARLGVLFSASREADLPSIIFVKAFEITASTYSHKKKVLEFLDQLCSF 245 (1014)
Q Consensus 166 ~~~t~wvv~D~~~~~g~~ll~~al~~~~~~s~~~Rv~~ihNp~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~l~~l~~~ 245 (1014)
.++++.++.|+..+-=+++-....+.+ ...+++|+-+.+-|-.... +....++..++.. ........|...+...
T Consensus 5 a~~~i~~f~D~~Cp~C~~~~~~l~~~~-~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~lf~~ 79 (154)
T cd03023 5 GDVTIVEFFDYNCGYCKKLAPELEKLL-KEDPDVRVVFKEFPILGES--SVLAARVALAVWK--NGPGKYLEFHNALMAT 79 (154)
T ss_pred CCEEEEEEECCCChhHHHhhHHHHHHH-HHCCCceEEEEeCCccCcc--hHHHHHHHHHHHH--hChhHHHHHHHHHHhc
Confidence 468899999999998888754443333 3345788888877753321 2233344433322 1112334444444321
Q ss_pred hhhhhhhccccccchhHHHHHHHHHHHHhcCCChHHHhhhcCccchhhHHHHHHHHHHHHHHHhCCCCCCceEEEccEEe
Q 001779 246 YERTYLLASSATADSTQAFIDKVCEFAEANGLSSKVYRASLPEYSKGKVRKQLNKVVQFLHRQLGVESGANAVITNGRVT 325 (1014)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~NGR~i 325 (1014)
. . . . .. +.+.+.++..|++.+.+...+.+ +...+.+........ .+|+. |.+.+++||+.+
T Consensus 80 ~--~-~-------~-~~---~~l~~~a~~~gl~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~gi~-gtPt~~v~g~~~ 140 (154)
T cd03023 80 R--G-R-------L-NE---ESLLRIAKKAGLDEAKLKKDMDD---PEIEATIDKNRQLAR-ALGIT-GTPAFIIGDTVI 140 (154)
T ss_pred C--C-C-------C-CH---HHHHHHHHHcCCCHHHHHHHhhC---hHHHHHHHHHHHHHH-HcCCC-cCCeEEECCEEe
Confidence 0 0 0 0 01 12334456678888888777653 233333444444443 35765 788999999977
No 37
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=74.27 E-value=33 Score=32.12 Aligned_cols=88 Identities=18% Similarity=0.170 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhcccC
Q 001779 719 ERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLDVIF 798 (1014)
Q Consensus 719 e~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp~Lf 798 (1014)
.+.+..++.|+++....+..++|+++.-+++..+.+..+... ...+..+... . ......+. ...+...
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~-------~~g~~~~~-~~~~~~~- 76 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKK-DPRVIRVINE--E-------NQGLAAAR-NAGLKAA- 76 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhc-CCCeEEEEec--C-------CCChHHHH-HHHHHHh-
Confidence 578899999999887667899999998888877777766543 1112111111 1 00110000 0111111
Q ss_pred CCCCCeEEEEeCceeecCCchH
Q 001779 799 PLSLEKVIFVDADQVVRADMGE 820 (1014)
Q Consensus 799 P~dvdKVLYLDaD~IV~~DL~e 820 (1014)
..+.|+++|+|.++..+.-+
T Consensus 77 --~~d~v~~~d~D~~~~~~~~~ 96 (156)
T cd00761 77 --RGEYILFLDADDLLLPDWLE 96 (156)
T ss_pred --cCCEEEEECCCCccCccHHH
Confidence 47999999999998766443
No 38
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=72.83 E-value=4.3 Score=44.66 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=0.0
Q ss_pred CCCeeeeeeEEEehHHHHhhcHHHHHHHHHHHhccCCCCCCCCCCChhhhccccCc-----eeeeCCccc
Q 001779 860 GRPYHISALYVVDLKRFRETAAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHTVP-----IFSLPQEWL 924 (1014)
Q Consensus 860 ~~~YfNSGV~LiNL~~wR~~~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~~~-----I~~Lp~~wN 924 (1014)
+....|+|+|++=-..|=+. +.+.+...... ..+.......||++|-.++...+ +..+|++|-
T Consensus 141 d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~-~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~ 208 (239)
T PF05637_consen 141 DWNGLNTGSFLIRNSPWSRD-FLDAWADPLYR-NYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWF 208 (239)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-ccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 56789999999955555432 22332222211 01111123579999876665333 445676664
No 39
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=71.97 E-value=35 Score=32.80 Aligned_cols=91 Identities=15% Similarity=0.161 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc-HHHHHHHHhhc
Q 001779 717 LYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR-IIWAYKILFLD 795 (1014)
Q Consensus 717 ~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r-~~~~Y~RLfLp 795 (1014)
+-...+..++.|+++.+..++.++|+.++-++...+.+......+...+.++.-. . .....+ +.+++..
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~--~----~~g~~~~~n~~~~~---- 76 (180)
T cd06423 7 NEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDK--E----NGGKAGALNAGLRH---- 76 (180)
T ss_pred ChHHHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEec--c----cCCchHHHHHHHHh----
Confidence 3357889999999988766789999998888777776666554432222222111 1 101111 1122211
Q ss_pred ccCCCCCCeEEEEeCceeecCC-chHH
Q 001779 796 VIFPLSLEKVIFVDADQVVRAD-MGEL 821 (1014)
Q Consensus 796 ~LfP~dvdKVLYLDaD~IV~~D-L~eL 821 (1014)
. .-+-|+++|+|.++..+ +.++
T Consensus 77 -~---~~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 77 -A---KGDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred -c---CCCEEEEECCCCCcChHHHHHH
Confidence 1 47889999999988765 5555
No 40
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=64.13 E-value=69 Score=32.79 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=61.2
Q ss_pred chHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhcc
Q 001779 717 LYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLDV 796 (1014)
Q Consensus 717 ~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp~ 796 (1014)
+-...+..++.||+..+..++.++|+.++=+++..+.+..+...++..+.++.-. . ......+...- +
T Consensus 8 n~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~--~-------~~G~~~~~n~g-~-- 75 (214)
T cd04196 8 NGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNG--K-------NLGVARNFESL-L-- 75 (214)
T ss_pred CcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCC--C-------CccHHHHHHHH-H--
Confidence 3357788999999987766799999998888887788888777665333332221 1 11111111111 1
Q ss_pred cCCCCCCeEEEEeCceeecCC-chHHHhc
Q 001779 797 IFPLSLEKVIFVDADQVVRAD-MGELYDM 824 (1014)
Q Consensus 797 LfP~dvdKVLYLDaD~IV~~D-L~eL~dl 824 (1014)
.. ..-+-|+++|+|.+...+ +..|++.
T Consensus 76 ~~-~~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 76 QA-ADGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred Hh-CCCCEEEEECCCcccChhHHHHHHHH
Confidence 11 257899999999777654 7788876
No 41
>PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein. The characteristics of the protein distribution suggest prophage matches.
Probab=58.74 E-value=34 Score=34.60 Aligned_cols=60 Identities=22% Similarity=0.413 Sum_probs=44.3
Q ss_pred eEEEEEEeccCCCCCCCceEEEEecCCC--CcccceEE---eccceeeeeeeCCceeEEEecCCC
Q 001779 547 ALVLTGHCSEKDHEPPQGLQLILGTKST--PHLVDTLV---MANLGYWQMKVSPGVWYLQLAPGR 606 (1014)
Q Consensus 547 ~ilieGh~~d~~~~~p~Glql~L~~~~~--~~~~dTiv---M~nlGYfQlka~pg~~~l~l~~gr 606 (1014)
+++|-|=-.|-...|..|.+++|....+ .++..|.. -.+-|||=|.+.||.|.+.|....
T Consensus 2 sV~ISGvL~dg~G~pv~g~~I~L~A~~tS~~Vv~~t~as~~t~~~G~Ys~~~epG~Y~V~l~~~g 66 (134)
T PF08400_consen 2 SVKISGVLKDGAGKPVPGCTITLKARRTSSTVVVGTVASVVTGEAGEYSFDVEPGVYRVTLKVEG 66 (134)
T ss_pred eEEEEEEEeCCCCCcCCCCEEEEEEccCchheEEEEEEEEEcCCCceEEEEecCCeEEEEEEECC
Confidence 4677787778778999999999975433 23333332 367799999999999999886433
No 42
>KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones]
Probab=56.90 E-value=73 Score=40.92 Aligned_cols=98 Identities=14% Similarity=0.287 Sum_probs=70.0
Q ss_pred eeEeecCCCCeEEeeecccccCCcccccccCCCcceEEEEEeeeEEEEEEeccCCCCCCCceEEEEecCCCCcccceEEe
Q 001779 504 LTMNLDVPEPWLVEPVIAVHDLDNILLEKLGDTRTLQAVFELEALVLTGHCSEKDHEPPQGLQLILGTKSTPHLVDTLVM 583 (1014)
Q Consensus 504 ~t~~~d~P~~w~v~~~~~~~DlDNi~l~~~~~~~~~~a~yeLe~ilieGh~~d~~~~~p~Glql~L~~~~~~~~~dTivM 583 (1014)
|+|.+..|..|.-+|..-..-.|-- .|.= ..+=+.+|.+...-|.|..--...-+|+|++.+|+++.+ .+..|.+=
T Consensus 78 yiLkIspP~GwsfePd~Vel~vDGk--td~C-s~n~DinFhftGFsv~GkVlgaaggGpagV~velrs~e~-~iast~T~ 153 (1165)
T KOG1948|consen 78 YILKISPPAGWSFEPDSVELKVDGK--TDAC-SLNEDINFHFTGFSVRGKVLGAAGGGPAGVLVELRSQED-PIASTKTE 153 (1165)
T ss_pred EEEEecCCCCccccCceEEEEeccc--cccc-cCCCceEEEEeeeeEeeEEeeccCCCcccceeecccccC-cceeeEec
Confidence 9999999999999885555444410 0000 122345788888888888766555799999999999844 46778887
Q ss_pred ccceeeeee-eCCceeEEEecCCC
Q 001779 584 ANLGYWQMK-VSPGVWYLQLAPGR 606 (1014)
Q Consensus 584 ~nlGYfQlk-a~pg~~~l~l~~gr 606 (1014)
++ |=|-|+ +.||-|.++-..++
T Consensus 154 ~~-Gky~f~~iiPG~Yev~ashp~ 176 (1165)
T KOG1948|consen 154 DG-GKYEFRNIIPGKYEVSASHPA 176 (1165)
T ss_pred CC-CeEEEEecCCCceEEeccCcc
Confidence 77 777777 99999998754433
No 43
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=56.23 E-value=21 Score=40.86 Aligned_cols=122 Identities=15% Similarity=0.146 Sum_probs=73.5
Q ss_pred ccCCeeEEEEeecCc---chHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHH--cCcEEEEEEecCCccc
Q 001779 702 RHGKTINIFSIASGH---LYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQE--YGFEYELITYKWPTWL 776 (1014)
Q Consensus 702 ~~~~~InIf~vasg~---~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~--~~~~i~fv~~~wp~~L 776 (1014)
++|. |=|++++.|. ..++ .. |-..+...++|+.+.|..+.+..+.=..+... .-...+++.++- .-+
T Consensus 61 ~~c~-vvV~saIFG~yD~l~qP-~~-----i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~~~~~~ig~WrIv~v~~-lp~ 132 (305)
T PF04765_consen 61 EKCR-VVVYSAIFGNYDKLRQP-KN-----ISEYSKKNVCFFMFVDEETLKSLESEGHIPDENKKIGIWRIVVVKN-LPY 132 (305)
T ss_pred hcCC-EEEEEEecCCCccccCc-hh-----hCHHHhcCccEEEEEehhhHHHHHhcCCccccccccCceEEEEecC-CCC
Confidence 3577 7777777765 2222 12 22223357999999997775544321111111 112344455531 101
Q ss_pred ccccccccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCC--CCCcEEEeec
Q 001779 777 HKQKEKQRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDI--KGRPLAYTPF 836 (1014)
Q Consensus 777 ~~q~~~~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL--~g~~iAaV~d 836 (1014)
.. .|...-+.+++.-.+|| +.+--||+|+-+.+.+|+..|.+--+ ++..+|+.+.
T Consensus 133 ~d----~rr~~r~~K~lpHrlfp-~y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H 189 (305)
T PF04765_consen 133 DD----PRRNGRIPKLLPHRLFP-NYDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKH 189 (305)
T ss_pred cc----hhhcCcccceeccccCC-CCceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCC
Confidence 22 22223366788889999 79999999999999999999886654 5667888654
No 44
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=56.08 E-value=1.2e+02 Score=34.38 Aligned_cols=133 Identities=14% Similarity=0.161 Sum_probs=67.8
Q ss_pred cCCeeEEEEeecCc-chHHHHHHHHHHHHHcCCCCeEEEEEeCCCC--hhHHHHHHHHHHHc------C--c-EEEEEEe
Q 001779 703 HGKTINIFSIASGH-LYERFLKIMILSVLKNTCRPVKFWFIKNYLS--PQFKDVIPHMAQEY------G--F-EYELITY 770 (1014)
Q Consensus 703 ~~~~InIf~vasg~-~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS--~~~k~~L~~l~~~~------~--~-~i~fv~~ 770 (1014)
..+.|=|++...+. .|...+--.|.++ ...++.|.+.+|.+..+ ....+.|.....+. . | .+.++.-
T Consensus 23 ~~e~VLILtplrna~~~l~~y~~~L~~L-~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~~ 101 (269)
T PF03452_consen 23 NKESVLILTPLRNAASFLPDYFDNLLSL-TYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILRK 101 (269)
T ss_pred cCCeEEEEEecCCchHHHHHHHHHHHhC-CCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEcC
Confidence 35668888776443 3444444444444 23345699999998777 55555555433221 1 1 4444433
Q ss_pred cCCccc----------ccccccccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccC
Q 001779 771 KWPTWL----------HKQKEKQRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCD 838 (1014)
Q Consensus 771 ~wp~~L----------~~q~~~~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~ 838 (1014)
++.... ..|..+.+.++-+.=.+|-.-|..+.+-|++||+|++ .....-+-++=-.++.+ .||.|.
T Consensus 102 df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv-~~P~~lI~dli~~~kdI-ivPn~~ 177 (269)
T PF03452_consen 102 DFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIV-ETPPTLIQDLIAHDKDI-IVPNCW 177 (269)
T ss_pred CCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcc-cCChHHHHHHHhCCCCE-Ecccee
Confidence 332111 1122211112333334455555448999999999997 32222222322234444 578884
No 45
>PRK11204 N-glycosyltransferase; Provisional
Probab=55.48 E-value=91 Score=36.54 Aligned_cols=102 Identities=12% Similarity=0.132 Sum_probs=65.9
Q ss_pred CeeEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc
Q 001779 705 KTINIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR 784 (1014)
Q Consensus 705 ~~InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r 784 (1014)
..+-|...+.+. +..+..++.|+++.+-.++.+++++|+-+++..+.+..+..++. .++++... . + ..+..
T Consensus 54 p~vsViIp~yne--~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~-~v~~i~~~--~---n-~Gka~ 124 (420)
T PRK11204 54 PGVSILVPCYNE--GENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIP-RLRVIHLA--E---N-QGKAN 124 (420)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCC-cEEEEEcC--C---C-CCHHH
Confidence 447777665543 57788899999876545789999999888888888888876653 34444432 1 1 11111
Q ss_pred -HHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 785 -IIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 785 -~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
...+... ...|-++++|+|.++..| +.++.+
T Consensus 125 aln~g~~~--------a~~d~i~~lDaD~~~~~d~L~~l~~ 157 (420)
T PRK11204 125 ALNTGAAA--------ARSEYLVCIDGDALLDPDAAAYMVE 157 (420)
T ss_pred HHHHHHHH--------cCCCEEEEECCCCCCChhHHHHHHH
Confidence 1122221 247899999999988766 555554
No 46
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=53.26 E-value=1.2e+02 Score=29.32 Aligned_cols=88 Identities=18% Similarity=0.150 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhcccC
Q 001779 719 ERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLDVIF 798 (1014)
Q Consensus 719 e~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp~Lf 798 (1014)
...+.-++.|+...+..+..+.|+.++-.+...+.+..... .+.++... .. .+...+ ...-+...
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~~----~~~~~~~~--~~-------~g~~~a-~n~~~~~~- 73 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFP----EVRLIRNG--EN-------LGFGAG-NNQGIREA- 73 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhCC----CeEEEecC--CC-------cChHHH-hhHHHhhC-
Confidence 56788999999987766788999998877777666655432 33333321 11 111111 11111111
Q ss_pred CCCCCeEEEEeCceeecCC-chHHHh
Q 001779 799 PLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 799 P~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
+.+-++++|+|.++..+ +..+++
T Consensus 74 --~~~~i~~~D~D~~~~~~~l~~~~~ 97 (166)
T cd04186 74 --KGDYVLLLNPDTVVEPGALLELLD 97 (166)
T ss_pred --CCCEEEEECCCcEECccHHHHHHH
Confidence 57899999999988765 555555
No 47
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=50.78 E-value=1.7e+02 Score=31.05 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=61.5
Q ss_pred CeeEEEEeecCcchHHHHHHHHHHHHHcCCCC--eEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccc
Q 001779 705 KTINIFSIASGHLYERFLKIMILSVLKNTCRP--VKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEK 782 (1014)
Q Consensus 705 ~~InIf~vasg~~Ye~~l~vmI~SIl~nt~~~--v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~ 782 (1014)
..+-|+..+. +-+..+..++.|++..+..+ +.+.|+.|+-++...+.+..+.+. .+.++... . +....
T Consensus 29 ~~isVvip~~--n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~v~~i~~~--~---~~g~~ 98 (251)
T cd06439 29 PTVTIIIPAY--NEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK---GVKLLRFP--E---RRGKA 98 (251)
T ss_pred CEEEEEEecC--CcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC---cEEEEEcC--C---CCChH
Confidence 3466665544 44677889999999765433 788888888887777777766544 34333322 1 11100
Q ss_pred ccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHhc
Q 001779 783 QRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYDM 824 (1014)
Q Consensus 783 ~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~dl 824 (1014)
.....++. .. .-|-|+++|+|.++..+ +..|++.
T Consensus 99 ~a~n~gi~-----~a---~~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 99 AALNRALA-----LA---TGEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred HHHHHHHH-----Hc---CCCEEEEEccccCcCHHHHHHHHHH
Confidence 00112222 11 23889999999988754 6667655
No 48
>PF13462 Thioredoxin_4: Thioredoxin; PDB: 3FEU_A 3HZ8_A 3DVW_A 3A3T_E 3GMF_A 1Z6M_A 3GYK_C 3BCK_A 3BD2_A 3BCI_A ....
Probab=50.05 E-value=30 Score=34.38 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=35.3
Q ss_pred hhHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceeccc
Q 001779 35 DMLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSES 78 (1014)
Q Consensus 35 ~~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~~ 78 (1014)
+.|..-+.+.++...+....++.++.|+ ...|.+++||..++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~tPt~~inG~~~~~ 149 (162)
T PF13462_consen 107 EQFNKCLNSDEIKAQLEADSQLARQLGI-TGTPTFFINGKYVVG 149 (162)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHT--SSSSEEEETTCEEET
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHcCC-ccccEEEECCEEeCC
Confidence 3455556777888999999999999999 778999999999864
No 49
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=48.58 E-value=1.1e+02 Score=31.31 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhcccC
Q 001779 719 ERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLDVIF 798 (1014)
Q Consensus 719 e~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp~Lf 798 (1014)
+..+.-++.||+..+..+..+.|+.++-++...+.+..+...++ +.++... . +......+..+.... +
T Consensus 9 ~~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~--i~~~~~~--~---n~g~~~~~n~~~~~a-~---- 76 (202)
T cd04185 9 LDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGDLDN--IVYLRLP--E---NLGGAGGFYEGVRRA-Y---- 76 (202)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEECCCCcchHHHHHHhcCCCc--eEEEECc--c---ccchhhHHHHHHHHH-h----
Confidence 56789999999987665678888888877777777766655444 3333321 1 110001111222111 1
Q ss_pred CCCCCeEEEEeCceeecCCch-HHHh
Q 001779 799 PLSLEKVIFVDADQVVRADMG-ELYD 823 (1014)
Q Consensus 799 P~dvdKVLYLDaD~IV~~DL~-eL~d 823 (1014)
....+-++++|+|.++..+.- +|.+
T Consensus 77 ~~~~d~v~~ld~D~~~~~~~l~~l~~ 102 (202)
T cd04185 77 ELGYDWIWLMDDDAIPDPDALEKLLA 102 (202)
T ss_pred ccCCCEEEEeCCCCCcChHHHHHHHH
Confidence 236899999999999876543 3443
No 50
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=47.20 E-value=2.1e+02 Score=28.83 Aligned_cols=147 Identities=15% Similarity=0.039 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHc---CCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhc
Q 001779 719 ERFLKIMILSVLKN---TCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLD 795 (1014)
Q Consensus 719 e~~l~vmI~SIl~n---t~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp 795 (1014)
...+..++.|+... +..++.+.++.++-++...+.+..+..++. .+.++... . +. +...++.+ -+.
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~i~~i~~~--~---n~----G~~~a~n~-g~~ 77 (181)
T cd04187 9 EENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDP-RVKVIRLS--R---NF----GQQAALLA-GLD 77 (181)
T ss_pred hhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCC-CEEEEEec--C---CC----CcHHHHHH-HHH
Confidence 34455555555543 334688888888888877777777665543 44444432 1 11 11111111 111
Q ss_pred ccCCCCCCeEEEEeCceeecC-CchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhh--hcc--CCCCeeeeeeEE
Q 001779 796 VIFPLSLEKVIFVDADQVVRA-DMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWK--DHL--RGRPYHISALYV 870 (1014)
Q Consensus 796 ~LfP~dvdKVLYLDaD~IV~~-DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~--~~L--~~~~YfNSGV~L 870 (1014)
.. .-+-|+++|+|..... .+..++.. +....-++...+.........++....+.. ..+ .......++.++
T Consensus 78 ~a---~~d~i~~~D~D~~~~~~~l~~l~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (181)
T cd04187 78 HA---RGDAVITMDADLQDPPELIPEMLAK-WEEGYDVVYGVRKNRKESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRL 153 (181)
T ss_pred hc---CCCEEEEEeCCCCCCHHHHHHHHHH-HhCCCcEEEEEecCCcchHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEE
Confidence 21 2488999999988754 47778776 432221222222111100000111111110 111 123566788888
Q ss_pred EehHHHHhhc
Q 001779 871 VDLKRFRETA 880 (1014)
Q Consensus 871 iNL~~wR~~~ 880 (1014)
+.-+.+++.+
T Consensus 154 ~~r~~~~~i~ 163 (181)
T cd04187 154 MDRKVVDALL 163 (181)
T ss_pred EcHHHHHHHH
Confidence 8888877654
No 51
>cd03023 DsbA_Com1_like DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.
Probab=46.22 E-value=25 Score=34.36 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=36.9
Q ss_pred ChhhHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceeccc
Q 001779 33 PQDMLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSES 78 (1014)
Q Consensus 33 ~~~~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~~ 78 (1014)
+.+.|...+.+.++...++...+...++|+ ...|.+++||..+.-
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi-~gtPt~~v~g~~~~G 142 (154)
T cd03023 98 DEAKLKKDMDDPEIEATIDKNRQLARALGI-TGTPAFIIGDTVIPG 142 (154)
T ss_pred CHHHHHHHhhChHHHHHHHHHHHHHHHcCC-CcCCeEEECCEEecC
Confidence 345677777778899999999999999999 668999999987653
No 52
>cd03019 DsbA_DsbA DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.
Probab=45.31 E-value=50 Score=33.42 Aligned_cols=46 Identities=7% Similarity=-0.023 Sum_probs=38.1
Q ss_pred hhhHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceecccch
Q 001779 34 QDMLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSESSE 80 (1014)
Q Consensus 34 ~~~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~~de 80 (1014)
.+.|....++.++.+.++...+...++|+ ...|.++|||..+....
T Consensus 113 ~~~~~~~~~s~~~~~~i~~~~~~~~~~gi-~gTPt~iInG~~~~~~~ 158 (178)
T cd03019 113 KKKFDAAYNSFSVKALVAKAEKLAKKYKI-TGVPAFVVNGKYVVNPS 158 (178)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHcCC-CCCCeEEECCEEEEChh
Confidence 44677777788888899999999999999 77899999999776644
No 53
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=44.64 E-value=1.8e+02 Score=29.96 Aligned_cols=104 Identities=13% Similarity=0.137 Sum_probs=61.5
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcC-cEEEEEEecCCccccccccccc-
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYG-FEYELITYKWPTWLHKQKEKQR- 784 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~-~~i~fv~~~wp~~L~~q~~~~r- 784 (1014)
+-|...+. +.+..+..++.||+..+-.++.+.|+.+.-++...+.+..+...+. ..+.++... .-. ....+.+
T Consensus 3 vsviip~~--n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~--~~~-g~~~~~~~ 77 (196)
T cd02520 3 VSILKPLC--GVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGG--EKV-GINPKVNN 77 (196)
T ss_pred eEEEEecC--CCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecC--CcC-CCCHhHHH
Confidence 34544444 4456688889999976655689999998888888888888877654 344444332 100 0000101
Q ss_pred HHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 785 IIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 785 ~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
+..++. . ..-+=++++|+|.++..+ |..|..
T Consensus 78 ~n~g~~-------~-a~~d~i~~~D~D~~~~~~~l~~l~~ 109 (196)
T cd02520 78 LIKGYE-------E-ARYDILVISDSDISVPPDYLRRMVA 109 (196)
T ss_pred HHHHHH-------h-CCCCEEEEECCCceEChhHHHHHHH
Confidence 111221 1 246899999999987543 344443
No 54
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=44.42 E-value=1.7e+02 Score=34.98 Aligned_cols=124 Identities=14% Similarity=0.195 Sum_probs=67.3
Q ss_pred CCCCCCeEEEEeCceeecCCchHHHhcCCCCCcEEEeeccCCCCCCCCcccccchhhhhcc-C--CCCeeeeeeEEEehH
Q 001779 798 FPLSLEKVIFVDADQVVRADMGELYDMDIKGRPLAYTPFCDNNKDMDGYRFWRQGFWKDHL-R--GRPYHISALYVVDLK 874 (1014)
Q Consensus 798 fP~dvdKVLYLDaD~IV~~DL~eL~dlDL~g~~iAaV~d~~s~~~~~g~~fw~~gyw~~~L-~--~~~YfNSGV~LiNL~ 874 (1014)
+| +++-+-|||+|.++..--.+ +.+.. ..+.+ --+. | |...+ . .-...|+|+|+|-.-
T Consensus 195 ~P-eaEWiWWLDsDALImNmsfe---lPler-----y~~~N--lVih-------g-~~~~l~~~kdW~GLNtGsFLIRNc 255 (429)
T PLN03182 195 HP-EVEWIWWMDSDALFTDMTFE---IPLEK-----YEGYN--LVIH-------G-WDELVYDQKSWIGLNTGSFLIRNC 255 (429)
T ss_pred CC-CceEEEEecCCceeecCCCC---CCHhH-----cCCcC--eeec-------c-chhhheeccccCccceeeEEEEcC
Confidence 67 69999999999988742111 12211 00100 0011 2 22222 1 235689999999655
Q ss_pred HHHhh----------------cHHHHHHHHHHHhccCCCCCCCCCCChhhhcccc------CceeeeCCccccccCcccc
Q 001779 875 RFRET----------------AAGDNLRVFYETLSKDPNSLANLDQDLPNYAQHT------VPIFSLPQEWLWCESWCGN 932 (1014)
Q Consensus 875 ~wR~~----------------~~~dklr~~~q~Ls~d~~sL~~~DQDlLN~v~~~------~~I~~Lp~~wN~~~~wc~~ 932 (1014)
.|-.. .+|+.+...+. +.-.+..-||.+|-+++.. .+++ |-.+|-+...|-.-
T Consensus 256 qWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~----~rp~~eaDDQSAlvyLl~~~~~~w~~kv~-le~~y~l~Gyw~~i 330 (429)
T PLN03182 256 QWSLDLLDAWAPMGPKGPIRDEAGKILTAELK----GRPAFEADDQSALVYLLLTQRERWGDKVY-LENSYYLHGYWVGL 330 (429)
T ss_pred HHHHHHHHHHHhcCCCCchhhhHHHHHHHhhc----CCCCCCcccHHHHHHHHHhcchhhccceE-EeecceeccccHHH
Confidence 55321 23333333332 2335556799999888632 2355 67777666655210
Q ss_pred ---------------cccCCCeEEEccC
Q 001779 933 ---------------ATKSKAKTIDLCN 945 (1014)
Q Consensus 933 ---------------e~~~~akiIh~~~ 945 (1014)
.....+-+.||++
T Consensus 331 v~~yee~~~~~~~g~gd~rwPfvtHF~G 358 (429)
T PLN03182 331 VDRYEEMMEKYHPGLGDDRWPFVTHFVG 358 (429)
T ss_pred HHHHHHHHHhcCCCCCCcccceeEeecc
Confidence 1235678999965
No 55
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=40.14 E-value=2.1e+02 Score=36.63 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=70.8
Q ss_pred CCeeEEEEeecCcchH---HHHHHHHHHHHHcC-CCCeEEEEEeCCCChhHHH----HHHHHHHHcCc--EEEEEEecCC
Q 001779 704 GKTINIFSIASGHLYE---RFLKIMILSVLKNT-CRPVKFWFIKNYLSPQFKD----VIPHMAQEYGF--EYELITYKWP 773 (1014)
Q Consensus 704 ~~~InIf~vasg~~Ye---~~l~vmI~SIl~nt-~~~v~F~IL~~~LS~~~k~----~L~~l~~~~~~--~i~fv~~~wp 773 (1014)
...+-|+.-+++..-+ ..+..++.|+.... ..++.|++++|.-.++... .+..++++++. .+.+..-.+
T Consensus 123 ~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~- 201 (691)
T PRK05454 123 EARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRR- 201 (691)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCc-
Confidence 3447777777775432 35777888998644 3579999999887766432 35567777643 332221111
Q ss_pred cccccccccccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHhcCCCCCcEEEee
Q 001779 774 TWLHKQKEKQRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYDMDIKGRPLAYTP 835 (1014)
Q Consensus 774 ~~L~~q~~~~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~dlDL~g~~iAaV~ 835 (1014)
+...|..-+..+.+.+ -...|-++.+|+|.+...| +..|...-..+--+|++.
T Consensus 202 ----n~~~KaGNl~~~~~~~-----~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 202 ----NVGRKAGNIADFCRRW-----GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred ----CCCccHHHHHHHHHhc-----CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 1111222222222221 1368999999999999988 566664322233466665
No 56
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=39.91 E-value=3.3e+02 Score=28.58 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeCCCChh-HHHHHHHHHHHcCcEEEEEEecCCccccccccccc-HHHHHHHHhhccc
Q 001779 720 RFLKIMILSVLKNTCRPVKFWFIKNYLSPQ-FKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR-IIWAYKILFLDVI 797 (1014)
Q Consensus 720 ~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~-~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r-~~~~Y~RLfLp~L 797 (1014)
..+.-++.|+.+.+-.++.++|+.++-++. ..+.+..+.++++..+.++... +. ...+.. +..++. ..
T Consensus 12 ~~l~~~l~sl~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~-~~----~G~~~~a~n~g~~-----~a 81 (236)
T cd06435 12 EMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVE-PL----PGAKAGALNYALE-----RT 81 (236)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcC-CC----CCCchHHHHHHHH-----hc
Confidence 578889999986554568898888765544 3456666666666566555443 11 111111 112222 11
Q ss_pred CCCCCCeEEEEeCceeecCC-chHHHhcCCCCCcEEEe
Q 001779 798 FPLSLEKVIFVDADQVVRAD-MGELYDMDIKGRPLAYT 834 (1014)
Q Consensus 798 fP~dvdKVLYLDaD~IV~~D-L~eL~dlDL~g~~iAaV 834 (1014)
- .+.|=|+++|+|.++..| |.++... +...-+|++
T Consensus 82 ~-~~~d~i~~lD~D~~~~~~~l~~l~~~-~~~~~~~~v 117 (236)
T cd06435 82 A-PDAEIIAVIDADYQVEPDWLKRLVPI-FDDPRVGFV 117 (236)
T ss_pred C-CCCCEEEEEcCCCCcCHHHHHHHHHH-hcCCCeeEE
Confidence 1 236889999999987643 4444433 233334444
No 57
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=39.46 E-value=3.5e+02 Score=28.12 Aligned_cols=96 Identities=17% Similarity=0.299 Sum_probs=56.0
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCC--eEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRP--VKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR 784 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~--v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r 784 (1014)
|-|+..+.+.. ...+..++.|++.-+-.+ +.+.|+.++-++...+.+..+...+. +..+... . +...+.+
T Consensus 3 vsviip~~n~~-~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~--~~~~~~~--~---~~~~~~~ 74 (234)
T cd06421 3 VDVFIPTYNEP-LEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYG--YRYLTRP--D---NRHAKAG 74 (234)
T ss_pred eEEEEecCCCc-HHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhcccC--ceEEEeC--C---CCCCcHH
Confidence 45555555422 356788999999755444 78999988877777777777655442 2222221 1 1111111
Q ss_pred -HHHHHHHHhhcccCCCCCCeEEEEeCceeecCCc
Q 001779 785 -IIWAYKILFLDVIFPLSLEKVIFVDADQVVRADM 818 (1014)
Q Consensus 785 -~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL 818 (1014)
...+... ..-+-|+++|+|.++..|.
T Consensus 75 ~~n~~~~~--------a~~d~i~~lD~D~~~~~~~ 101 (234)
T cd06421 75 NLNNALAH--------TTGDFVAILDADHVPTPDF 101 (234)
T ss_pred HHHHHHHh--------CCCCEEEEEccccCcCccH
Confidence 1122211 1578999999999887553
No 58
>PRK15036 hydroxyisourate hydrolase; Provisional
Probab=37.19 E-value=65 Score=32.71 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=36.3
Q ss_pred EEEEEeccCCC-CCCCceEEEEecCCCC--cccceEEeccceeeee-----eeCCceeEEEe
Q 001779 549 VLTGHCSEKDH-EPPQGLQLILGTKSTP--HLVDTLVMANLGYWQM-----KVSPGVWYLQL 602 (1014)
Q Consensus 549 lieGh~~d~~~-~~p~Glql~L~~~~~~--~~~dTivM~nlGYfQl-----ka~pg~~~l~l 602 (1014)
.|.||..|..+ .|..|+++.|....+. ...-+.+-..-|-|.+ ...||.|.|..
T Consensus 28 ~Is~HVLDt~~G~PA~gV~V~L~~~~~~~w~~l~~~~Td~dGR~~~l~~~~~~~~G~Y~L~F 89 (137)
T PRK15036 28 ILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVF 89 (137)
T ss_pred CeEEEEEeCCCCcCCCCCEEEEEEccCCceEEEEEEEECCCCCCccccCcccCCCeeEEEEE
Confidence 49999999987 9999999999765321 1223344445588865 13466666665
No 59
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=37.09 E-value=2.3e+02 Score=33.77 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=65.5
Q ss_pred CeeEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc
Q 001779 705 KTINIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR 784 (1014)
Q Consensus 705 ~~InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r 784 (1014)
..+-|+..+.+. +..+..++.|+++.+-.++.+.+++|+-+++..+.+.++..++. .++++... . ++ .+.+
T Consensus 75 p~vsViIP~yNE--~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~-~v~vv~~~--~---n~-Gka~ 145 (444)
T PRK14583 75 PLVSILVPCFNE--GLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDP-RLRVIHLA--H---NQ-GKAI 145 (444)
T ss_pred CcEEEEEEeCCC--HHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCC-CEEEEEeC--C---CC-CHHH
Confidence 457787766553 56678899999876545689999999888888888888776653 34444332 1 11 1111
Q ss_pred H-HHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 785 I-IWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 785 ~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
- ..+.. . ..-|-++.+|+|.+...| +..+..
T Consensus 146 AlN~gl~-------~-a~~d~iv~lDAD~~~~~d~L~~lv~ 178 (444)
T PRK14583 146 ALRMGAA-------A-ARSEYLVCIDGDALLDKNAVPYLVA 178 (444)
T ss_pred HHHHHHH-------h-CCCCEEEEECCCCCcCHHHHHHHHH
Confidence 1 12211 1 257999999999998765 444543
No 60
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=36.02 E-value=71 Score=37.64 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=40.5
Q ss_pred eEEEEEEeccCCCCCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEe
Q 001779 547 ALVLTGHCSEKDHEPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQL 602 (1014)
Q Consensus 547 ~ilieGh~~d~~~~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l 602 (1014)
+.=|.|+..|.+..|..|+.+++...+ ...+++=..-|+|.+...||.|.+.+
T Consensus 294 ~~gI~G~V~D~~g~pi~~A~V~v~g~~---~~~~~~T~~~G~y~~~l~pG~Y~v~v 346 (376)
T cd03866 294 HLGVKGQVFDSNGNPIPNAIVEVKGRK---HICPYRTNVNGEYFLLLLPGKYMINV 346 (376)
T ss_pred cCceEEEEECCCCCccCCeEEEEEcCC---ceeEEEECCCceEEEecCCeeEEEEE
Confidence 555899999986799999999997532 11233445569999999999999887
No 61
>PRK10954 periplasmic protein disulfide isomerase I; Provisional
Probab=35.87 E-value=1.5e+02 Score=31.57 Aligned_cols=137 Identities=10% Similarity=0.133 Sum_probs=67.6
Q ss_pred eEEEEEEeCCChhHHHHHH--HHHHHHhcC-CCceEEEEeecCCCCCCCcchHHHHHHHHHhhcccchhhHHH-HHHHHh
Q 001779 168 VTHLLAVDVTSKKGMKLLH--EGIRFLIGG-SNGARLGVLFSASREADLPSIIFVKAFEITASTYSHKKKVLE-FLDQLC 243 (1014)
Q Consensus 168 ~t~wvv~D~~~~~g~~ll~--~al~~~~~~-s~~~Rv~~ihNp~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~-~l~~l~ 243 (1014)
.++....|+..+.=+.+-. ..++.+++. ..++|+..+|-|-..+. +....++..+| ......++... +...+.
T Consensus 39 ~~VvEffdy~CphC~~~~~~l~~~~~~~~~~~~~v~~~~~~~~f~~~~--~~~~~~a~~~a-~~~~~~~k~~~~lf~~i~ 115 (207)
T PRK10954 39 PQVLEFFSFYCPHCYQFEEVYHVSDNVKKKLPEGTKMTKYHVEFLGPL--GKELTQAWAVA-MALGVEDKVTPPLFEGVQ 115 (207)
T ss_pred CeEEEEeCCCCccHHHhcccccchHHHHHhCCCCCeEEEecccccchh--hHHHHHHHHHH-HHhCcHHHHHHHHHHHHH
Confidence 4566788999988887532 111223222 35778877776543211 11122222222 22221122222 222221
Q ss_pred hhhhhhhhhccccccchhHHHHHHHHHHHHhcCCChHHHhhhcCccchhhHHHHHHHHHHHHHHHhCCCCCCceEEEccE
Q 001779 244 SFYERTYLLASSATADSTQAFIDKVCEFAEANGLSSKVYRASLPEYSKGKVRKQLNKVVQFLHRQLGVESGANAVITNGR 323 (1014)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~NGR 323 (1014)
+ .... ... +.+.+.++..|++.+.+..++.+.. .......... ..+.+|+. |.+++++|||
T Consensus 116 ~---~~~~--------~~~---~~L~~~a~~~Gld~~~f~~~l~s~~---~~~~v~~~~~-~a~~~gI~-gtPtfiInGk 176 (207)
T PRK10954 116 K---TQTI--------QSA---ADIRDVFIKAGVKGEDYDAAWNSFV---VKSLVAQQEK-AAADLQLR-GVPAMFVNGK 176 (207)
T ss_pred c---cCCC--------CCH---HHHHHHHHHcCCCHHHHHHHHhChH---HHHHHHHHHH-HHHHcCCC-CCCEEEECCE
Confidence 1 1111 011 2233445678999999998886522 2222222222 23446774 8899999999
Q ss_pred Eec
Q 001779 324 VTF 326 (1014)
Q Consensus 324 ~i~ 326 (1014)
++-
T Consensus 177 y~v 179 (207)
T PRK10954 177 YMV 179 (207)
T ss_pred EEE
Confidence 974
No 62
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=35.69 E-value=1.1e+02 Score=33.12 Aligned_cols=78 Identities=26% Similarity=0.327 Sum_probs=48.0
Q ss_pred cchH-HHHHHHHHHHHHcCC----------CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc
Q 001779 716 HLYE-RFLKIMILSVLKNTC----------RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR 784 (1014)
Q Consensus 716 ~~Ye-~~l~vmI~SIl~nt~----------~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r 784 (1014)
+|-+ ..+.-+|.||+...- .++.++|+.|+-++ .+ . .+..
T Consensus 6 yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d---------------------~~------~--gk~~ 56 (244)
T cd04190 6 YNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK---------------------KN------R--GKRD 56 (244)
T ss_pred ecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc---------------------cc------C--cchH
Confidence 4543 678899999996543 26889999988876 00 0 0101
Q ss_pred H-HHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 785 I-IWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 785 ~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
- .|. .+.+...+.-..-+-|+++|+|.++..| |..|+.
T Consensus 57 ~~~~~-~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~ 96 (244)
T cd04190 57 SQLWF-FNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYK 96 (244)
T ss_pred HHHHH-HHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHH
Confidence 0 121 2222222222357999999999999877 566663
No 63
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=34.84 E-value=1e+02 Score=36.36 Aligned_cols=51 Identities=8% Similarity=0.065 Sum_probs=38.5
Q ss_pred eEEEEEEeccCCC-CCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEe
Q 001779 547 ALVLTGHCSEKDH-EPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQL 602 (1014)
Q Consensus 547 ~ilieGh~~d~~~-~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l 602 (1014)
+.-|.|...|..+ .|..|..+.+...+. .|++ .--|.|.+..+||.|.|++
T Consensus 296 ~~gI~G~V~D~~~g~pl~~AtV~V~g~~~----~~~T-d~~G~f~~~l~pG~ytl~v 347 (375)
T cd03863 296 HRGVRGFVLDATDGRGILNATISVADINH----PVTT-YKDGDYWRLLVPGTYKVTA 347 (375)
T ss_pred cCeEEEEEEeCCCCCCCCCeEEEEecCcC----ceEE-CCCccEEEccCCeeEEEEE
Confidence 4557888889755 899999999865322 2333 3459999999999999986
No 64
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=34.53 E-value=3.7e+02 Score=27.29 Aligned_cols=89 Identities=17% Similarity=0.255 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeCCC-ChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhcccC
Q 001779 720 RFLKIMILSVLKNTCRPVKFWFIKNYL-SPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLDVIF 798 (1014)
Q Consensus 720 ~~l~vmI~SIl~nt~~~v~F~IL~~~L-S~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp~Lf 798 (1014)
.++..++.||+..+-.+..+.|+.|+- ++...+.+..+.+.++ +.++... . + .+...+.-.-+- .
T Consensus 13 ~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~--i~~i~~~--~---n----~G~~~a~N~g~~---~ 78 (201)
T cd04195 13 EFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP--LKVVPLE--K---N----RGLGKALNEGLK---H 78 (201)
T ss_pred HHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC--eEEEEcC--c---c----ccHHHHHHHHHH---h
Confidence 478999999998775567777787766 5556666666666655 4444432 1 0 111111111111 1
Q ss_pred CCCCCeEEEEeCceeecCC-chHHHh
Q 001779 799 PLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 799 P~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
..-+=|+++|+|.+...+ +..++.
T Consensus 79 -a~gd~i~~lD~Dd~~~~~~l~~~~~ 103 (201)
T cd04195 79 -CTYDWVARMDTDDISLPDRFEKQLD 103 (201)
T ss_pred -cCCCEEEEeCCccccCcHHHHHHHH
Confidence 246889999999877643 333443
No 65
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=34.34 E-value=4.1e+02 Score=29.57 Aligned_cols=149 Identities=17% Similarity=0.213 Sum_probs=79.7
Q ss_pred HHHHHHHHHHcC-CCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCc-ccccccccccHHHHHHHHhhcccCC
Q 001779 722 LKIMILSVLKNT-CRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPT-WLHKQKEKQRIIWAYKILFLDVIFP 799 (1014)
Q Consensus 722 l~vmI~SIl~nt-~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~-~L~~q~~~~r~~~~Y~RLfLp~LfP 799 (1014)
+.-.+.|+.... +..+.+.|++++-++++.+.|..+.+.+++.. ++...-+. .+... ..| -.+.. .
T Consensus 19 l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~-~i~~~~~~~~f~~a--~ar-N~g~~------~-- 86 (281)
T PF10111_consen 19 LRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIR-YIRHEDNGEPFSRA--KAR-NIGAK------Y-- 86 (281)
T ss_pred HHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceE-EEEcCCCCCCcCHH--HHH-HHHHH------H--
Confidence 344466666533 35789999999888888888999988877652 12221111 11110 011 11111 0
Q ss_pred CCCCeEEEEeCceeecCCc-hHHHh----cCCCCCcEEEeecc-CC----CCCCCC-cccccchhhhhccC------CCC
Q 001779 800 LSLEKVIFVDADQVVRADM-GELYD----MDIKGRPLAYTPFC-DN----NKDMDG-YRFWRQGFWKDHLR------GRP 862 (1014)
Q Consensus 800 ~dvdKVLYLDaD~IV~~DL-~eL~d----lDL~g~~iAaV~d~-~s----~~~~~g-~~fw~~gyw~~~L~------~~~ 862 (1014)
..-+-|+++|+|+++..|. ..+.. ++-....+.+.|-. .+ ..-... ...|.......... +..
T Consensus 87 A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (281)
T PF10111_consen 87 ARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFI 166 (281)
T ss_pred cCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHhhcchhcchHHHHHHHhhccccccccc
Confidence 2578999999999987554 44555 44443344444421 11 000000 11222222212221 234
Q ss_pred eeeeeeEEEehHHHHhhcHH
Q 001779 863 YHISALYVVDLKRFRETAAG 882 (1014)
Q Consensus 863 YfNSGV~LiNL~~wR~~~~~ 882 (1014)
++.+|.++++-+.|.+.+..
T Consensus 167 ~~~s~~~~i~r~~f~~iGGf 186 (281)
T PF10111_consen 167 AFASSCFLINREDFLEIGGF 186 (281)
T ss_pred cccceEEEEEHHHHHHhCCC
Confidence 67789999999999988643
No 66
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=34.30 E-value=41 Score=35.28 Aligned_cols=104 Identities=15% Similarity=0.208 Sum_probs=54.9
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCc-EEEEEEecCCccccccccccc-
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGF-EYELITYKWPTWLHKQKEKQR- 784 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~-~i~fv~~~wp~~L~~q~~~~r- 784 (1014)
|-|...+.+. ...+.-++.|+++.+-.+++++|+.+.-+++..+.+..+...+.. .++++.-. .... ...+.+
T Consensus 3 v~Vvip~~~~--~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~--~~~g-~~~k~~a 77 (228)
T PF13641_consen 3 VSVVIPAYNE--DDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRP--RNPG-PGGKARA 77 (228)
T ss_dssp EEEE--BSS---HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE------HH-HHHHHHH
T ss_pred EEEEEEecCC--HHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecC--CCCC-cchHHHH
Confidence 4455554443 457788999999643356999999988777777778888777653 35544332 1010 001111
Q ss_pred HHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 785 IIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 785 ~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
+..+.. .. ..+-|+++|+|.++..| |.++..
T Consensus 78 ~n~~~~-----~~---~~d~i~~lD~D~~~~p~~l~~~~~ 109 (228)
T PF13641_consen 78 LNEALA-----AA---RGDYILFLDDDTVLDPDWLERLLA 109 (228)
T ss_dssp HHHHHH-----H------SEEEEE-SSEEE-CHHHHHHHH
T ss_pred HHHHHH-----hc---CCCEEEEECCCcEECHHHHHHHHH
Confidence 112221 11 37899999999998643 444443
No 67
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=33.46 E-value=2.8e+02 Score=27.58 Aligned_cols=95 Identities=14% Similarity=0.211 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhhccc
Q 001779 718 YERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFLDVI 797 (1014)
Q Consensus 718 Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfLp~L 797 (1014)
-...+.-+|.|+...+..++.+.++.+.-++...+.+..+...+...+..+.-. +. ..+...+.-+- + .
T Consensus 8 ~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~n~g-~-~- 76 (182)
T cd06420 8 RPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQE-DE-------GFRKAKIRNKA-I-A- 76 (182)
T ss_pred ChHHHHHHHHHHHhccCCCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcC-Cc-------chhHHHHHHHH-H-H-
Confidence 356788999999988766789999998877777777777665443333222111 01 00111111110 0 1
Q ss_pred CCCCCCeEEEEeCceeecCC-chHHHhc
Q 001779 798 FPLSLEKVIFVDADQVVRAD-MGELYDM 824 (1014)
Q Consensus 798 fP~dvdKVLYLDaD~IV~~D-L~eL~dl 824 (1014)
. ..-+-|++||+|.+...| +..+.+.
T Consensus 77 ~-a~g~~i~~lD~D~~~~~~~l~~~~~~ 103 (182)
T cd06420 77 A-AKGDYLIFIDGDCIPHPDFIADHIEL 103 (182)
T ss_pred H-hcCCEEEEEcCCcccCHHHHHHHHHH
Confidence 1 135899999999988765 5555544
No 68
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=32.87 E-value=2.3e+02 Score=29.21 Aligned_cols=96 Identities=10% Similarity=0.067 Sum_probs=53.8
Q ss_pred chHHHHHHHHHHHHHcCCCC--eEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHHhh
Q 001779 717 LYERFLKIMILSVLKNTCRP--VKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKILFL 794 (1014)
Q Consensus 717 ~Ye~~l~vmI~SIl~nt~~~--v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RLfL 794 (1014)
+....+.-+|.||+..+..+ +.++|+.++-++...+.+.......+..+..+... . ... .....+..+ -+
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~--~--~~~---~g~~~a~n~-g~ 78 (229)
T cd04192 7 NEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNS--R--VSI---SGKKNALTT-AI 78 (229)
T ss_pred CcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeecc--C--ccc---chhHHHHHH-HH
Confidence 44677889999999877655 88999998776666666651112223344333322 1 000 111111111 11
Q ss_pred cccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 795 DVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 795 p~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
.. ..-+-|+++|+|.++..| |..|..
T Consensus 79 ~~---~~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 79 KA---AKGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HH---hcCCEEEEECCCcccCHHHHHHHHH
Confidence 11 146899999999988754 444544
No 69
>PRK10954 periplasmic protein disulfide isomerase I; Provisional
Probab=32.49 E-value=50 Score=35.20 Aligned_cols=44 Identities=9% Similarity=-0.059 Sum_probs=36.5
Q ss_pred hhhHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceeccc
Q 001779 34 QDMLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSES 78 (1014)
Q Consensus 34 ~~~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~~ 78 (1014)
.+.|+..+.+.++...++...+-.+++|+ ...|.++|||..+-.
T Consensus 137 ~~~f~~~l~s~~~~~~v~~~~~~a~~~gI-~gtPtfiInGky~v~ 180 (207)
T PRK10954 137 GEDYDAAWNSFVVKSLVAQQEKAAADLQL-RGVPAMFVNGKYMVN 180 (207)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHcCC-CCCCEEEECCEEEEc
Confidence 45677777778888888888888899999 778999999998654
No 70
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=32.11 E-value=22 Score=41.56 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=54.4
Q ss_pred eEEEEeecCc--chHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccc-------
Q 001779 707 INIFSIASGH--LYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLH------- 777 (1014)
Q Consensus 707 InIf~vasg~--~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~------- 777 (1014)
.+||.+-.-. .+-.--.-.|-|+.+++++-..+.+....-|+.....++.+... +.++--+..+.|..++
T Consensus 129 ~~~fm~w~S~~~~f~~r~~~sIESa~k~hP~~cv~vls~t~ds~~~~s~~kp~~~~-~lsv~~v~~~lp~llk~t~~e~~ 207 (409)
T KOG1928|consen 129 VRFFMTWISPAESFGVREMCSIESAFKTHPEGCVVVLSKTMDSPNGYSILKPFLDS-GLSVIAVTPDLPFLLKDTPGETW 207 (409)
T ss_pred eeEEEEecccccCCChhhhhhhHHHHhhCCCceEEEEEccccCCCCccccccHhHh-hhhhcccccCchhhHhhCccccH
Confidence 7888764333 33333455688999888754344444444455554444444432 1122112222222111
Q ss_pred -----ccc-ccc-----cHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCchHHHh
Q 001779 778 -----KQK-EKQ-----RIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGELYD 823 (1014)
Q Consensus 778 -----~q~-~~~-----r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~eL~d 823 (1014)
.+. ... +...-..||.+=-=+- =||||+|+||.+++..|-+
T Consensus 208 l~~~k~g~~~~~~~~l~~~lSdl~RLA~LyKYG-----GvYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 208 LERWKDGRLDPGKIPLLQNLSDLSRLALLYKYG-----GVYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHhcccCCCcccchhhHHHHHHHHHHHHhC-----CEEeeccEEEecccccccc
Confidence 111 000 0012233333211121 2899999999999999875
No 71
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=29.60 E-value=2.6e+02 Score=32.53 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=61.0
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcC--CCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcc-ccccc---
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNT--CRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTW-LHKQK--- 780 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt--~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~-L~~q~--- 780 (1014)
+.|+.+|++. ..++.-+|.||+++. ..+..++|..|+-.++..+.+ +.++..+..+.- +.. ..+..
T Consensus 2 ~PVlv~ayNR--p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v----~~~~~~i~~i~~--~~~~~~~~~~~~ 73 (334)
T cd02514 2 IPVLVIACNR--PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVA----KSFGDGVTHIQH--PPISIKNVNPPH 73 (334)
T ss_pred cCEEEEecCC--HHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHH----HhhccccEEEEc--ccccccccCccc
Confidence 4566666643 567899999999874 467889999888665544333 334333332221 110 11100
Q ss_pred -ccc-cHHHHHHHHhhcccCCC-CCCeEEEEeCceeecCCchHHH
Q 001779 781 -EKQ-RIIWAYKILFLDVIFPL-SLEKVIFVDADQVVRADMGELY 822 (1014)
Q Consensus 781 -~~~-r~~~~Y~RLfLp~LfP~-dvdKVLYLDaD~IV~~DL~eL~ 822 (1014)
... ..++..++.-+..+|-. +.++||.||.|.++.-|.-+.+
T Consensus 74 ~~~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 74 KFQGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred ccchhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 000 11222233344444421 4899999999999988855444
No 72
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=28.81 E-value=3.2e+02 Score=26.14 Aligned_cols=53 Identities=9% Similarity=0.101 Sum_probs=39.3
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEY 761 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~ 761 (1014)
+-|... ..|.+..+..++.|++..+-.+..+.|++++-++...+.+..+....
T Consensus 5 ~siiip--~~n~~~~l~~~l~s~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~ 57 (291)
T COG0463 5 VSVVIP--TYNEEEYLPEALESLLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKD 57 (291)
T ss_pred EEEEEe--ccchhhhHHHHHHHHHhhhhcceEEEEEeCCCCCChHHHHHHHhhhc
Confidence 445443 34667999999999998887666777788888888777777766543
No 73
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=28.75 E-value=4.7e+02 Score=27.27 Aligned_cols=97 Identities=12% Similarity=0.227 Sum_probs=58.0
Q ss_pred eEEEEeecCcchH-HHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc-
Q 001779 707 INIFSIASGHLYE-RFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR- 784 (1014)
Q Consensus 707 InIf~vasg~~Ye-~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r- 784 (1014)
|-|..++.+ -. ..+..+|.|+...+ ++.++|+.++-+++..+.+..... ...+..+.-. ...+..
T Consensus 2 isVvIp~~n--e~~~~l~~~l~sl~~q~--~~eiivvdd~s~d~~~~~l~~~~~--~~~~~v~~~~-------~~g~~~a 68 (235)
T cd06434 2 VTVIIPVYD--EDPDVFRECLRSILRQK--PLEIIVVTDGDDEPYLSILSQTVK--YGGIFVITVP-------HPGKRRA 68 (235)
T ss_pred eEEEEeecC--CChHHHHHHHHHHHhCC--CCEEEEEeCCCChHHHHHHHhhcc--CCcEEEEecC-------CCChHHH
Confidence 445555554 34 77899999999877 788999998888776666533221 1222222211 011111
Q ss_pred HHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHhc
Q 001779 785 IIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYDM 824 (1014)
Q Consensus 785 ~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~dl 824 (1014)
+..++.+ ..-+-|+++|+|.++..| +..|...
T Consensus 69 ~n~g~~~--------a~~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 69 LAEGIRH--------VTTDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred HHHHHHH--------hCCCEEEEECCCceeChhHHHHHHHh
Confidence 1122221 147999999999999876 6666644
No 74
>PRK06437 hypothetical protein; Provisional
Probab=27.66 E-value=52 Score=29.06 Aligned_cols=19 Identities=32% Similarity=0.560 Sum_probs=17.5
Q ss_pred HhCCCCCCceEEEccEEec
Q 001779 308 QLGVESGANAVITNGRVTF 326 (1014)
Q Consensus 308 ~~~l~~~~~~~~~NGR~i~ 326 (1014)
.||+++...++.+||++++
T Consensus 29 ~Lgi~~~~vaV~vNg~iv~ 47 (67)
T PRK06437 29 DLGLDEEEYVVIVNGSPVL 47 (67)
T ss_pred HcCCCCccEEEEECCEECC
Confidence 4799999999999999997
No 75
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=27.20 E-value=6.4e+02 Score=26.29 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=59.9
Q ss_pred EEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccH
Q 001779 708 NIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRI 785 (1014)
Q Consensus 708 nIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~ 785 (1014)
-|..++.+ -...+.-++.|+.+.+. .++.++|+.+.-+++..+.+..+.... ..+.++.-. . ... ...+
T Consensus 3 sIiip~~n--~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~-~~v~~i~~~--~---~~~-~~a~ 73 (249)
T cd02525 3 SIIIPVRN--EEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKD-PRIRLIDNP--K---RIQ-SAGL 73 (249)
T ss_pred EEEEEcCC--chhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcC-CeEEEEeCC--C---CCc-hHHH
Confidence 45454443 35677888999987654 468899999888887778787776542 234444321 1 000 0011
Q ss_pred HHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHhc
Q 001779 786 IWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYDM 824 (1014)
Q Consensus 786 ~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~dl 824 (1014)
..+... . .-+-|+++|+|.++..+ +..+.+.
T Consensus 74 N~g~~~------a--~~d~v~~lD~D~~~~~~~l~~~~~~ 105 (249)
T cd02525 74 NIGIRN------S--RGDIIIRVDAHAVYPKDYILELVEA 105 (249)
T ss_pred HHHHHH------h--CCCEEEEECCCccCCHHHHHHHHHH
Confidence 122111 1 47899999999987543 5666643
No 76
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=27.11 E-value=8.3e+02 Score=30.13 Aligned_cols=118 Identities=17% Similarity=0.183 Sum_probs=73.0
Q ss_pred CCeeEEEEeecCcchHHHHHHHHHHHHHcCC-CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccc
Q 001779 704 GKTINIFSIASGHLYERFLKIMILSVLKNTC-RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEK 782 (1014)
Q Consensus 704 ~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~-~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~ 782 (1014)
...+-|+..| +|-+..+..++.|++...+ .++.++++.+.-+++..+.+..++.+|.. ++.+... . .....|
T Consensus 65 ~p~vaIlIPA--~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~-v~~vv~~--~--~gp~~K 137 (504)
T PRK14716 65 EKRIAIFVPA--WREADVIGRMLEHNLATLDYENYRIFVGTYPNDPATLREVDRLAARYPR-VHLVIVP--H--DGPTSK 137 (504)
T ss_pred CCceEEEEec--cCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCC-eEEEEeC--C--CCCCCH
Confidence 3457776554 5557788999999887655 57899999887778888888888877753 3333332 1 111222
Q ss_pred ccH-HHHHHHHhhcccCC-CCCCeEEEEeCceeecCCchHHHhcCCCC
Q 001779 783 QRI-IWAYKILFLDVIFP-LSLEKVIFVDADQVVRADMGELYDMDIKG 828 (1014)
Q Consensus 783 ~r~-~~~Y~RLfLp~LfP-~dvdKVLYLDaD~IV~~DL~eL~dlDL~g 828 (1014)
..- .+++..+.-..--. ...|=|+.+|||.++.-|.-.+++-.+.+
T Consensus 138 a~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~ 185 (504)
T PRK14716 138 ADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPR 185 (504)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCC
Confidence 222 23443332211111 12578999999999998887776544443
No 77
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=27.08 E-value=5.7e+02 Score=26.24 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc-HHHHHHHHhhc
Q 001779 717 LYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR-IIWAYKILFLD 795 (1014)
Q Consensus 717 ~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r-~~~~Y~RLfLp 795 (1014)
|-+..+.-+|.||+.-+ .++.++++.+.-++...+.+. +. .....+.++...++. ....+.. ..+++.+..-.
T Consensus 7 Ne~~~l~~~l~sl~~~~-~~~eIivvdd~S~D~t~~~~~-~~-~~~~~v~~i~~~~~~---~~~Gk~~aln~g~~~~~~~ 80 (191)
T cd06436 7 NEEAVIQRTLASLLRNK-PNFLVLVIDDASDDDTAGIVR-LA-ITDSRVHLLRRHLPN---ARTGKGDALNAAYDQIRQI 80 (191)
T ss_pred ccHHHHHHHHHHHHhCC-CCeEEEEEECCCCcCHHHHHh-he-ecCCcEEEEeccCCc---CCCCHHHHHHHHHHHHhhh
Confidence 44677889999999766 568899999888887777665 22 222345445432221 0011111 12333322110
Q ss_pred c---cCCCCCCeEEEEeCceeecCCchH
Q 001779 796 V---IFPLSLEKVIFVDADQVVRADMGE 820 (1014)
Q Consensus 796 ~---LfP~dvdKVLYLDaD~IV~~DL~e 820 (1014)
. =.+..-+-|+++|+|.++..+.-+
T Consensus 81 ~~~~g~~~~~d~v~~~DaD~~~~~~~l~ 108 (191)
T cd06436 81 LIEEGADPERVIIAVIDADGRLDPNALE 108 (191)
T ss_pred ccccccCCCccEEEEECCCCCcCHhHHH
Confidence 0 011123579999999987755433
No 78
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=26.86 E-value=4.4e+02 Score=28.08 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=55.9
Q ss_pred eEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCccccccccccc
Q 001779 707 INIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQR 784 (1014)
Q Consensus 707 InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r 784 (1014)
+-|...+ .|-+..+.-++.||+..+- ..+.+.++.++-++...+.+..+.......+ +... +. .+. .+.+
T Consensus 3 vsIiIp~--~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i--~~~~-~~--~~~-G~~~ 74 (241)
T cd06427 3 YTILVPL--YKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRV--VVVP-PS--QPR-TKPK 74 (241)
T ss_pred EEEEEec--CCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeE--EEec-CC--CCC-chHH
Confidence 4455443 4456788999999987543 2477888888777777776665532112233 2221 10 000 0111
Q ss_pred -HHHHHHHHhhcccCCCCCCeEEEEeCceeecC-CchHHHh
Q 001779 785 -IIWAYKILFLDVIFPLSLEKVIFVDADQVVRA-DMGELYD 823 (1014)
Q Consensus 785 -~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~-DL~eL~d 823 (1014)
...++.. ..-+=|+++|+|.++.- .+.++..
T Consensus 75 a~n~g~~~--------a~gd~i~~~DaD~~~~~~~l~~~~~ 107 (241)
T cd06427 75 ACNYALAF--------ARGEYVVIYDAEDAPDPDQLKKAVA 107 (241)
T ss_pred HHHHHHHh--------cCCCEEEEEcCCCCCChHHHHHHHH
Confidence 1122221 23588999999988764 4445554
No 79
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=26.61 E-value=83 Score=26.32 Aligned_cols=23 Identities=9% Similarity=0.096 Sum_probs=16.2
Q ss_pred HHHHHHH-hCCCCCCcceeEcceec
Q 001779 53 SSMFVFK-LGLTKLKCCLLMNGLVS 76 (1014)
Q Consensus 53 s~~f~~R-LGl~~~~P~vlvNGv~l 76 (1014)
..+.+++ .|. ...|++|+||..+
T Consensus 37 ~~~~l~~~~g~-~~~P~v~i~g~~I 60 (60)
T PF00462_consen 37 AREELKELSGV-RTVPQVFIDGKFI 60 (60)
T ss_dssp HHHHHHHHHSS-SSSSEEEETTEEE
T ss_pred HHHHHHHHcCC-CccCEEEECCEEC
Confidence 3344444 487 7889999999864
No 80
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=26.13 E-value=2.5e+02 Score=33.03 Aligned_cols=50 Identities=18% Similarity=0.387 Sum_probs=40.0
Q ss_pred eEEEEEEeccCCCCCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEe
Q 001779 547 ALVLTGHCSEKDHEPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQL 602 (1014)
Q Consensus 547 ~ilieGh~~d~~~~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l 602 (1014)
|.=|.|+.+|.+..|..|+.+.+.... .++ =...|+|.+..+||.|.+++
T Consensus 286 ~~gI~G~V~d~~g~pi~~A~V~v~g~~-----~~~-T~~~G~y~~~L~pG~y~v~v 335 (363)
T cd06245 286 HKGVHGVVTDKAGKPISGATIVLNGGH-----RVY-TKEGGYFHVLLAPGQHNINV 335 (363)
T ss_pred CcEEEEEEEcCCCCCccceEEEEeCCC-----ceE-eCCCcEEEEecCCceEEEEE
Confidence 666899999986699999999997631 233 34569999999999999987
No 81
>PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains. The B region domain of Cna has a prealbumin-like beta-sandwich fold of seven strands in two sheets with a Greek key topology []. However, this domain does not mediate collagen binding, the IPR008456 from INTERPRO region carries out that function; instead it appears to form a stalk that presents the ligand binding domain away from the bacterial cell surface. Cna is a collagen-binding MSCRAMM (Microbial Surface Component Recognizing Adhesive Matrix Molecules), and is necessary and sufficient for S. aureus cells to adhere to cartilage.; PDB: 2X5P_A 3RKP_A 3KPT_A 1VLF_T 1TI2_F 1TI6_D 1TI4_J 1VLE_V 1VLD_X 3PF2_A ....
Probab=25.85 E-value=91 Score=26.91 Aligned_cols=40 Identities=20% Similarity=0.403 Sum_probs=32.7
Q ss_pred CceEEEEecCCCCcccc-eEEeccceeeeee-eCCceeEEEe
Q 001779 563 QGLQLILGTKSTPHLVD-TLVMANLGYWQMK-VSPGVWYLQL 602 (1014)
Q Consensus 563 ~Glql~L~~~~~~~~~d-TivM~nlGYfQlk-a~pg~~~l~l 602 (1014)
.|+.++|...++..... +.+-..-|.+.|+ ..||.|.|+-
T Consensus 2 ~Ga~f~L~~~~~~~~~~~~~~Td~~G~~~f~~L~~G~Y~l~E 43 (70)
T PF05738_consen 2 AGATFELYDEDGNEVIEVTVTTDENGKYTFKNLPPGTYTLKE 43 (70)
T ss_dssp STEEEEEEETTSEEEEEEEEEGGTTSEEEEEEEESEEEEEEE
T ss_pred CCeEEEEEECCCCEEEEEEEEECCCCEEEEeecCCeEEEEEE
Confidence 68999999887777665 6778888999999 5699988763
No 82
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=25.57 E-value=75 Score=32.64 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=34.6
Q ss_pred hhHhhhhcccchhhhHHhHHHHHHHhCCCCCCcceeEcceecc
Q 001779 35 DMLLKLEKEKTFMDQSQESSMFVFKLGLTKLKCCLLMNGLVSE 77 (1014)
Q Consensus 35 ~~l~~l~~ss~yd~~~~~s~~f~~RLGl~~~~P~vlvNGv~l~ 77 (1014)
+.|...+.+.++...++...+-..++|+ ...|.++|||..+-
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~~~a~~~gi-~gvPtfvv~g~~~~ 179 (192)
T cd03022 138 DELLAAADDPAVKAALRANTEEAIARGV-FGVPTFVVDGEMFW 179 (192)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHcCC-CcCCeEEECCeeec
Confidence 3566667778888888888888899999 66899999998774
No 83
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=25.55 E-value=5.7e+02 Score=28.31 Aligned_cols=104 Identities=10% Similarity=0.049 Sum_probs=58.1
Q ss_pred HHHHHHHHHHc-----CCCCeEEEEEeCCCChhHH----HHHHHHHHHcC--cEEEEEEecCCcccccccccccHHHHHH
Q 001779 722 LKIMILSVLKN-----TCRPVKFWFIKNYLSPQFK----DVIPHMAQEYG--FEYELITYKWPTWLHKQKEKQRIIWAYK 790 (1014)
Q Consensus 722 l~vmI~SIl~n-----t~~~v~F~IL~~~LS~~~k----~~L~~l~~~~~--~~i~fv~~~wp~~L~~q~~~~r~~~~Y~ 790 (1014)
+...+.|.++. ...++.++++.|.-.++.. ..+.++.+++. ..+.++.-. . + .+...++.
T Consensus 15 l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~--~---~----~g~Kag~l 85 (254)
T cd04191 15 VFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRR--E---N----TGRKAGNI 85 (254)
T ss_pred HHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcC--C---C----CCccHHHH
Confidence 56667777652 1236889999877665543 23445665553 333333221 1 1 11123444
Q ss_pred HHhhcccCCCCCCeEEEEeCceeecCC-chHHHhcCCCCCcEEEee
Q 001779 791 ILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYDMDIKGRPLAYTP 835 (1014)
Q Consensus 791 RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~dlDL~g~~iAaV~ 835 (1014)
+-++...- ...+-|+.+|+|.++..| |..+...-..+.-+|+|.
T Consensus 86 ~~~~~~~~-~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq 130 (254)
T cd04191 86 ADFCRRWG-SRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQ 130 (254)
T ss_pred HHHHHHhC-CCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEe
Confidence 44554332 247899999999998865 666765433344567774
No 84
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=25.16 E-value=2.9e+02 Score=33.34 Aligned_cols=114 Identities=16% Similarity=0.190 Sum_probs=55.8
Q ss_pred cCCeeEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEe-cCCcc-ccc
Q 001779 703 HGKTINIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITY-KWPTW-LHK 778 (1014)
Q Consensus 703 ~~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~-~wp~~-L~~ 778 (1014)
..+.+.|+.+||+. -.++.-++.||+++.+ ....+.|--|+-.++..+ ..+.|+-.+..+.- +.... ..+
T Consensus 91 ~~~~~pVlV~AcNR--p~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~----vi~~y~~~v~~i~~~~~~~i~~~~ 164 (434)
T PF03071_consen 91 KEPVIPVLVFACNR--PDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAE----VIKSYGDQVTYIQHPDFSPITIPP 164 (434)
T ss_dssp ------EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHH----HHHGGGGGSEEEE-S--S-----T
T ss_pred CCCcceEEEEecCC--cHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHH----HHHHhhhhheeeecCCcCCceeCc
Confidence 34568888888876 2346778999998764 345555555655444433 34455433333322 11010 111
Q ss_pred cc--ccc-cHHHHHHHHhhcccCCC-CCCeEEEEeCceeecCCchHHH
Q 001779 779 QK--EKQ-RIIWAYKILFLDVIFPL-SLEKVIFVDADQVVRADMGELY 822 (1014)
Q Consensus 779 q~--~~~-r~~~~Y~RLfLp~LfP~-dvdKVLYLDaD~IV~~DL~eL~ 822 (1014)
.. ... ..++..++.-|..+|.. ..++||.|..|+.+--|.-+-|
T Consensus 165 ~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf 212 (434)
T PF03071_consen 165 KEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYF 212 (434)
T ss_dssp T-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHH
Confidence 10 111 11344556666666642 4889999999999999988776
No 85
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=23.67 E-value=7.3e+02 Score=26.50 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=60.9
Q ss_pred eeEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCc-EEEEEEecCCccccccccc
Q 001779 706 TINIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGF-EYELITYKWPTWLHKQKEK 782 (1014)
Q Consensus 706 ~InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~-~i~fv~~~wp~~L~~q~~~ 782 (1014)
.+-|+..+ .|.+..+..++.++.+..+ .++.++|++|+-++...+.+..+.+.++. .+..+... . +
T Consensus 10 ~vsVvIp~--yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~--~---n---- 78 (243)
T PLN02726 10 KYSIIVPT--YNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRP--G---K---- 78 (243)
T ss_pred eEEEEEcc--CCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecC--C---C----
Confidence 35665544 4556666777777765443 26899999998888888888888777642 34333221 1 0
Q ss_pred ccHHHHHHHHhhcccCCCCCCeEEEEeCceeecC-CchHHHhc
Q 001779 783 QRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRA-DMGELYDM 824 (1014)
Q Consensus 783 ~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~-DL~eL~dl 824 (1014)
.....++..-+- . ..-+-|+++|+|....- .+.+|++.
T Consensus 79 ~G~~~a~n~g~~-~---a~g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 79 LGLGTAYIHGLK-H---ASGDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred CCHHHHHHHHHH-H---cCCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 111112211111 1 13689999999987653 45666643
No 86
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=23.16 E-value=6.8e+02 Score=29.07 Aligned_cols=105 Identities=12% Similarity=0.105 Sum_probs=64.2
Q ss_pred CCeeEEEEeecCcchHHHHHHHHHHHHHcCCCCeEEEEEeCCCChhHHHHHHHHHHHcC-cEEEEEEecCCccccccccc
Q 001779 704 GKTINIFSIASGHLYERFLKIMILSVLKNTCRPVKFWFIKNYLSPQFKDVIPHMAQEYG-FEYELITYKWPTWLHKQKEK 782 (1014)
Q Consensus 704 ~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~~~v~F~IL~~~LS~~~k~~L~~l~~~~~-~~i~fv~~~wp~~L~~q~~~ 782 (1014)
...+-|...+.| -+..+.-++.|++..+-.++.+.++.+.-++...+.+.++.+.+. ..++++.-. . +.. .
T Consensus 40 ~p~VSViiP~~n--ee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~--~--~~G--~ 111 (373)
T TIGR03472 40 WPPVSVLKPLHG--DEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDA--R--RHG--P 111 (373)
T ss_pred CCCeEEEEECCC--CChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECC--C--CCC--C
Confidence 344777766654 467788999999976644588888777766666777888877664 456555221 1 000 0
Q ss_pred ccHHHHHHHHhhcccCCCCCCeEEEEeCceeecCCchH
Q 001779 783 QRIIWAYKILFLDVIFPLSLEKVIFVDADQVVRADMGE 820 (1014)
Q Consensus 783 ~r~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~DL~e 820 (1014)
.+-.++.... +.. ..-|-++++|+|+++..|--+
T Consensus 112 ~~K~~~l~~~-~~~---a~ge~i~~~DaD~~~~p~~L~ 145 (373)
T TIGR03472 112 NRKVSNLINM-LPH---ARHDILVIADSDISVGPDYLR 145 (373)
T ss_pred ChHHHHHHHH-HHh---ccCCEEEEECCCCCcChhHHH
Confidence 0111222222 222 247899999999988765433
No 87
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=22.97 E-value=6.9e+02 Score=29.15 Aligned_cols=112 Identities=13% Similarity=0.166 Sum_probs=67.1
Q ss_pred CCeeEEEEeecCcchHHHHHHHHHHHHHcCC-CCeEEEEEeCCCChhHHHHHHHHHHHcC--cEEEEEEec-CCcccccc
Q 001779 704 GKTINIFSIASGHLYERFLKIMILSVLKNTC-RPVKFWFIKNYLSPQFKDVIPHMAQEYG--FEYELITYK-WPTWLHKQ 779 (1014)
Q Consensus 704 ~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~-~~v~F~IL~~~LS~~~k~~L~~l~~~~~--~~i~fv~~~-wp~~L~~q 779 (1014)
...+-|...+.+ -+..+..++.|++..+- .++.++|++|+-++...+.++++.+.+. ..++++... -|. .-
T Consensus 39 ~p~VSVIIpa~N--e~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~---g~ 113 (384)
T TIGR03469 39 WPAVVAVVPARN--EADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPP---GW 113 (384)
T ss_pred CCCEEEEEecCC--cHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCC---CC
Confidence 345777666544 46788999999997543 2588999999888888888888876654 245555432 011 00
Q ss_pred ccccc-HHHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHHh
Q 001779 780 KEKQR-IIWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELYD 823 (1014)
Q Consensus 780 ~~~~r-~~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~d 823 (1014)
..+.+ ...++.. .....| +-|-++++|+|+++..| +..+..
T Consensus 114 ~Gk~~A~n~g~~~--A~~~~~-~gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 114 SGKLWAVSQGIAA--ARTLAP-PADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred cchHHHHHHHHHH--HhccCC-CCCEEEEECCCCCCChhHHHHHHH
Confidence 00100 0112211 122232 36899999999987644 466653
No 88
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=22.89 E-value=4.9e+02 Score=28.88 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=54.8
Q ss_pred chH-HHHHHHHHHHHHcCCC--CeEEEEEeCCCChhHHHHHHH-HHHHcCcEEEEEEecCCcccccccccccHHHHHHHH
Q 001779 717 LYE-RFLKIMILSVLKNTCR--PVKFWFIKNYLSPQFKDVIPH-MAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKIL 792 (1014)
Q Consensus 717 ~Ye-~~l~vmI~SIl~nt~~--~v~F~IL~~~LS~~~k~~L~~-l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RL 792 (1014)
|.. ..+..+|.||+.++.. .+.+.|++|+-++.....+.. ....+...++++... . +.........+...
T Consensus 8 N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~--~---n~G~~~a~N~g~~~- 81 (299)
T cd02510 8 NEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLK--K---REGLIRARIAGARA- 81 (299)
T ss_pred cCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcC--C---CCCHHHHHHHHHHH-
Confidence 445 7888999999988764 357888888777666666544 222333345555442 1 11000001122211
Q ss_pred hhcccCCCCCCeEEEEeCceeecC-CchHHHh
Q 001779 793 FLDVIFPLSLEKVIFVDADQVVRA-DMGELYD 823 (1014)
Q Consensus 793 fLp~LfP~dvdKVLYLDaD~IV~~-DL~eL~d 823 (1014)
..-+-|++||+|+++.. -|.+|.+
T Consensus 82 -------A~gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 82 -------ATGDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred -------ccCCEEEEEeCCcccCccHHHHHHH
Confidence 23589999999999864 4555654
No 89
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=22.67 E-value=3.1e+02 Score=32.16 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=37.2
Q ss_pred EEEEEeccCCCCCCCceEEEEecCCCCcccceEEeccceeeeeeeCCceeEEEe
Q 001779 549 VLTGHCSEKDHEPPQGLQLILGTKSTPHLVDTLVMANLGYWQMKVSPGVWYLQL 602 (1014)
Q Consensus 549 lieGh~~d~~~~~p~Glql~L~~~~~~~~~dTivM~nlGYfQlka~pg~~~l~l 602 (1014)
-|.|+..|....|..|..+.+.... .-|+ =..-|+|.+..+||.|.|.+
T Consensus 299 ~i~G~V~d~~g~pl~~A~V~i~~~~----~~~~-Td~~G~f~~~l~~G~y~l~v 347 (374)
T cd03858 299 GIKGFVRDANGNPIANATISVEGIN----HDVT-TAEDGDYWRLLLPGTYNVTA 347 (374)
T ss_pred ceEEEEECCCCCccCCeEEEEecce----eeeE-ECCCceEEEecCCEeEEEEE
Confidence 4789999986699999999994321 1222 34449999999999999988
No 90
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=22.63 E-value=5e+02 Score=26.86 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=60.2
Q ss_pred chHHHHHHHHHHHHHcCC----CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccccccHHHHHHHH
Q 001779 717 LYERFLKIMILSVLKNTC----RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKEKQRIIWAYKIL 792 (1014)
Q Consensus 717 ~Ye~~l~vmI~SIl~nt~----~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~~~r~~~~Y~RL 792 (1014)
|-+..+..++.|+++.+. .++.+.++.++-++...+.+..+.+.++..+.++... ... +...+..+-
T Consensus 7 N~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~--~n~-------G~~~a~~~g 77 (211)
T cd04188 7 NEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLP--KNR-------GKGGAVRAG 77 (211)
T ss_pred ChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcc--cCC-------CcHHHHHHH
Confidence 446778888999998743 4688888988888888888888877765444444432 111 111111111
Q ss_pred hhcccCCCCCCeEEEEeCceeecC-CchHHHhc
Q 001779 793 FLDVIFPLSLEKVIFVDADQVVRA-DMGELYDM 824 (1014)
Q Consensus 793 fLp~LfP~dvdKVLYLDaD~IV~~-DL~eL~dl 824 (1014)
+ ... .-+-|+++|+|..... ++..|.+.
T Consensus 78 ~-~~a---~gd~i~~ld~D~~~~~~~l~~l~~~ 106 (211)
T cd04188 78 M-LAA---RGDYILFADADLATPFEELEKLEEA 106 (211)
T ss_pred H-HHh---cCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 1 111 2388999999987764 57777765
No 91
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=21.62 E-value=8.1e+02 Score=29.23 Aligned_cols=102 Identities=17% Similarity=0.085 Sum_probs=63.2
Q ss_pred CCeeEEEEeecCcchHHHHHHHHHHHHHcCC--CCeEEEEEeCCCChhHHHHHHHHHHHcCcEEEEEEecCCcccccccc
Q 001779 704 GKTINIFSIASGHLYERFLKIMILSVLKNTC--RPVKFWFIKNYLSPQFKDVIPHMAQEYGFEYELITYKWPTWLHKQKE 781 (1014)
Q Consensus 704 ~~~InIf~vasg~~Ye~~l~vmI~SIl~nt~--~~v~F~IL~~~LS~~~k~~L~~l~~~~~~~i~fv~~~wp~~L~~q~~ 781 (1014)
...+-|+..+. |-+..+..++.|+...+- ..+.+++++|+-+++..+.+..+.+.+. .+.++..+ +. ..
T Consensus 48 ~P~vsVIIP~y--Ne~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~-~v~v~~~~-~~-----~G 118 (439)
T TIGR03111 48 LPDITIIIPVY--NSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFP-GLSLRYMN-SD-----QG 118 (439)
T ss_pred CCCEEEEEEeC--CChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCC-CeEEEEeC-CC-----CC
Confidence 44577766554 456888999999987553 3478999999988888888887776653 22222222 11 11
Q ss_pred cccH-HHHHHHHhhcccCCCCCCeEEEEeCceeecCC-chHHH
Q 001779 782 KQRI-IWAYKILFLDVIFPLSLEKVIFVDADQVVRAD-MGELY 822 (1014)
Q Consensus 782 ~~r~-~~~Y~RLfLp~LfP~dvdKVLYLDaD~IV~~D-L~eL~ 822 (1014)
+.+- ..+..+ ..-+-|+++|+|.++..| +.++.
T Consensus 119 ka~AlN~gl~~--------s~g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 119 KAKALNAAIYN--------SIGKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred HHHHHHHHHHH--------ccCCEEEEECCCCCcChHHHHHHH
Confidence 1121 123221 134679999999998765 44554
No 92
>PRK10824 glutaredoxin-4; Provisional
Probab=20.33 E-value=1.2e+02 Score=29.91 Aligned_cols=26 Identities=8% Similarity=-0.100 Sum_probs=19.9
Q ss_pred HHHHHhCCCCCCcceeEcceecccchH
Q 001779 55 MFVFKLGLTKLKCCLLMNGLVSESSEE 81 (1014)
Q Consensus 55 ~f~~RLGl~~~~P~vlvNGv~l~~de~ 81 (1014)
...+++|- ...||||+||..+---++
T Consensus 61 ~l~~~sg~-~TVPQIFI~G~~IGG~dd 86 (115)
T PRK10824 61 ELPKYANW-PTFPQLWVDGELVGGCDI 86 (115)
T ss_pred HHHHHhCC-CCCCeEEECCEEEcChHH
Confidence 45556777 789999999999965543
Done!